AMS64_03015 875e74ed25a57955cf4472db00012973 89 Pfam PF01313 Bacterial export proteins, family 3 8 77 6.6E-23 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_03015 875e74ed25a57955cf4472db00012973 89 PIRSF PIRSF004669 1 89 2.8E-25 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_03015 875e74ed25a57955cf4472db00012973 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.3E-26 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AMS64_03015 875e74ed25a57955cf4472db00012973 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.5E-14 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_03015 875e74ed25a57955cf4472db00012973 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.5E-14 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_03015 875e74ed25a57955cf4472db00012973 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.5E-14 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 112 721 7.9E-255 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 SUPERFAMILY SSF51011 621 723 9.21E-32 T 11-10-2018 AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 128 202 2.4E-16 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 96 724 42.08 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 SUPERFAMILY SSF51445 238 618 3.53E-106 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 SMART SM00642 247 624 7.0E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 Gene3D G3DSA:3.20.20.80 232 609 9.5E-161 T 11-10-2018 AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 SUPERFAMILY SSF81296 10 99 1.12E-9 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 Gene3D G3DSA:2.60.40.10 1 218 1.9E-49 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 625 722 6.9E-21 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 PIRSF PIRSF000463 1 725 1.2E-276 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 Gene3D G3DSA:2.60.40.1180 620 725 1.3E-35 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 Pfam PF00128 Alpha amylase, catalytic domain 273 345 3.5E-8 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_04640 e40ff6f35a67f8f79b316d227df2492e 725 SUPERFAMILY SSF81296 113 223 8.4E-25 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_05590 2a55bd27eacd567480752d8c964ea26c 262 Pfam PF10127 Predicted nucleotidyltransferase 8 255 4.2E-86 T 11-10-2018 IPR018775 Nucleotidyltransferase, predicted AMS64_15790 088adfae2bc95173d8eac1c4a7a0b159 445 Pfam PF00460 Flagella basal body rod protein 3 33 5.6E-9 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMS64_15790 088adfae2bc95173d8eac1c4a7a0b159 445 Pfam PF07559 Flagellar basal body protein FlaE 185 325 5.7E-24 T 11-10-2018 IPR011491 Flagellar hook protein FlgE AMS64_15790 088adfae2bc95173d8eac1c4a7a0b159 445 Gene3D G3DSA:2.60.98.20 156 326 6.9E-22 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily AMS64_15790 088adfae2bc95173d8eac1c4a7a0b159 445 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 366 444 4.3E-15 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMS64_15790 088adfae2bc95173d8eac1c4a7a0b159 445 SUPERFAMILY SSF117143 80 406 1.24E-72 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMS64_15790 088adfae2bc95173d8eac1c4a7a0b159 445 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AMS64_15790 088adfae2bc95173d8eac1c4a7a0b159 445 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 427 5.1E-104 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMS64_02165 bcc5db547e279d55f35a7ba7b912a25c 1117 Gene3D G3DSA:3.40.50.10930 4 309 5.1E-114 T 11-10-2018 AMS64_02165 bcc5db547e279d55f35a7ba7b912a25c 1117 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1116 20.836 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AMS64_02165 bcc5db547e279d55f35a7ba7b912a25c 1117 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 801 1.6E-284 T 11-10-2018 AMS64_02165 bcc5db547e279d55f35a7ba7b912a25c 1117 PIRSF PIRSF000980 1 1117 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AMS64_02165 bcc5db547e279d55f35a7ba7b912a25c 1117 SUPERFAMILY SSF52980 820 1113 1.5E-76 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMS64_02165 bcc5db547e279d55f35a7ba7b912a25c 1117 SUPERFAMILY SSF52540 1 345 6.64E-110 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_02165 bcc5db547e279d55f35a7ba7b912a25c 1117 Gene3D G3DSA:1.10.10.160 79 198 5.1E-114 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AMS64_02165 bcc5db547e279d55f35a7ba7b912a25c 1117 Gene3D G3DSA:3.40.50.300 333 803 3.7E-183 T 11-10-2018 AMS64_02165 bcc5db547e279d55f35a7ba7b912a25c 1117 Gene3D G3DSA:1.10.10.990 863 932 4.4E-18 T 11-10-2018 AMS64_02165 bcc5db547e279d55f35a7ba7b912a25c 1117 SUPERFAMILY SSF52540 358 807 1.24E-98 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_02165 bcc5db547e279d55f35a7ba7b912a25c 1117 Gene3D G3DSA:1.10.486.10 449 656 3.7E-183 T 11-10-2018 AMS64_02165 bcc5db547e279d55f35a7ba7b912a25c 1117 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1079 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 PRINTS PR00934 X-His dipeptidase (M25) signature 249 268 2.6E-83 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 2.6E-83 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 2.6E-83 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 2.6E-83 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 PRINTS PR00934 X-His dipeptidase (M25) signature 361 379 2.6E-83 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 PRINTS PR00934 X-His dipeptidase (M25) signature 205 222 2.6E-83 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 PRINTS PR00934 X-His dipeptidase (M25) signature 426 442 2.6E-83 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 2.6E-83 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 PRINTS PR00934 X-His dipeptidase (M25) signature 448 470 2.6E-83 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 SUPERFAMILY SSF53187 12 479 1.01E-63 T 11-10-2018 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 PIRSF PIRSF016599 1 483 2.5E-206 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 Pfam PF07687 Peptidase dimerisation domain 207 287 4.8E-5 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 Gene3D G3DSA:3.40.630.10 376 483 1.3E-23 T 11-10-2018 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 Gene3D G3DSA:3.40.630.10 1 235 1.6E-62 T 11-10-2018 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 Pfam PF01546 Peptidase family M20/M25/M40 73 478 3.7E-24 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMS64_19300 015b554f38cf8325c2c83a6d7d278191 483 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 480 1.5E-180 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMS64_01070 064d0e9b30a59fc16c4a6678258785e6 375 Gene3D G3DSA:1.10.10.10 284 374 2.7E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_01070 064d0e9b30a59fc16c4a6678258785e6 375 Pfam PF13776 Domain of unknown function (DUF4172) 5 82 2.6E-25 T 11-10-2018 IPR025230 Domain of unknown function DUF4172 AMS64_01070 064d0e9b30a59fc16c4a6678258785e6 375 Pfam PF02661 Fic/DOC family 113 224 9.5E-14 T 11-10-2018 IPR003812 Fido domain AMS64_01070 064d0e9b30a59fc16c4a6678258785e6 375 SUPERFAMILY SSF140931 99 286 5.49E-33 T 11-10-2018 IPR036597 Fido-like domain superfamily AMS64_01070 064d0e9b30a59fc16c4a6678258785e6 375 Gene3D G3DSA:1.10.3290.10 48 283 6.3E-40 T 11-10-2018 IPR036597 Fido-like domain superfamily AMS64_01070 064d0e9b30a59fc16c4a6678258785e6 375 SUPERFAMILY SSF46785 271 367 9.93E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 43 207 1.8E-50 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 506 521 3.6E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 329 343 3.6E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 435 450 3.6E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 378 3.6E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 3.6E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 SUPERFAMILY SSF51445 320 598 8.36E-85 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 370 395 - T 11-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 SMART SM01038 727 998 2.4E-119 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 Gene3D G3DSA:2.60.120.260 1 208 7.3E-76 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 Pfam PF02929 Beta galactosidase small chain 729 997 3.2E-61 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 Gene3D G3DSA:2.60.40.10 601 701 2.8E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 320 603 7.1E-111 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 Gene3D G3DSA:3.20.20.80 319 599 3.3E-103 T 11-10-2018 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 Pfam PF00703 Glycosyl hydrolases family 2 209 318 1.6E-14 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 SUPERFAMILY SSF49785 2 207 4.68E-63 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 Gene3D G3DSA:2.70.98.10 733 1003 4.3E-75 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 Gene3D G3DSA:2.60.40.10 209 318 7.5E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 435 449 - T 11-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 SUPERFAMILY SSF49303 210 318 1.17E-19 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 Pfam PF16353 Domain of unknown function(DUF4981) 615 699 2.0E-14 T 11-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 SUPERFAMILY SSF74650 713 999 5.34E-80 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMS64_00085 686ddf6f7585b5f5b5f242cd4d013aa6 1024 SUPERFAMILY SSF49303 596 702 1.01E-19 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMS64_04175 b605feda5481883c26aa800c367e08a3 314 Gene3D G3DSA:3.40.50.720 99 283 9.7E-118 T 11-10-2018 AMS64_04175 b605feda5481883c26aa800c367e08a3 314 Gene3D G3DSA:3.40.50.720 20 306 9.7E-118 T 11-10-2018 AMS64_04175 b605feda5481883c26aa800c367e08a3 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 278 1.2E-54 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMS64_04175 b605feda5481883c26aa800c367e08a3 314 SUPERFAMILY SSF51735 101 279 1.42E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Pfam PF00072 Response regulator receiver domain 1176 1285 1.6E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SMART SM00388 820 885 8.2E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Gene3D G3DSA:1.10.287.130 810 885 5.4E-24 T 11-10-2018 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 54 249 2.0E-15 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SMART SM00448 1174 1285 2.1E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 291 502 7.2E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SMART SM00387 932 1043 1.6E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SMART SM00073 1314 1412 9.4E-6 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SUPERFAMILY SSF52172 1175 1297 3.27E-33 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1027 1040 1.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 968 982 1.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 986 996 1.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1003 1021 1.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Pfam PF01627 Hpt domain 1325 1399 1.1E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Gene3D G3DSA:3.40.190.10 281 500 1.2E-45 T 11-10-2018 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Pfam PF00512 His Kinase A (phospho-acceptor) domain 821 885 1.4E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Pfam PF08448 PAS fold 564 670 1.7E-6 T 11-10-2018 IPR013656 PAS fold-4 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SUPERFAMILY SSF47226 1268 1404 1.7E-18 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SUPERFAMILY SSF55785 666 798 2.28E-8 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 678 807 3.5E-6 T 11-10-2018 IPR000014 PAS domain AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SUPERFAMILY SSF47384 805 886 5.1E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Gene3D G3DSA:3.30.565.10 886 1043 6.8E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SUPERFAMILY SSF53850 37 253 3.76E-23 T 11-10-2018 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Gene3D G3DSA:3.30.450.20 699 809 2.2E-8 T 11-10-2018 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Gene3D G3DSA:3.40.50.2300 1169 1300 1.7E-34 T 11-10-2018 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SMART SM00062 290 504 5.1E-16 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SMART SM00062 45 260 1.9E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Gene3D G3DSA:1.20.120.160 1301 1414 4.5E-15 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 933 1041 3.9E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Gene3D G3DSA:3.40.190.10 376 464 1.2E-45 T 11-10-2018 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SUPERFAMILY SSF55874 874 1041 7.2E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Gene3D G3DSA:3.30.450.20 543 681 1.8E-17 T 11-10-2018 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Gene3D G3DSA:3.40.190.10 131 224 3.2E-26 T 11-10-2018 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SUPERFAMILY SSF53850 283 506 1.38E-31 T 11-10-2018 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 Gene3D G3DSA:3.40.190.10 36 257 3.2E-26 T 11-10-2018 AMS64_13650 c09be2b2e2ed02d8995abb0ac6835097 1414 SUPERFAMILY SSF55785 543 667 6.28E-11 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 Pfam PF03454 MoeA C-terminal region (domain IV) 332 403 6.6E-20 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 SMART SM00852 182 319 1.2E-45 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 255 288 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 SUPERFAMILY SSF63882 8 177 1.31E-55 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 179 315 1.7E-34 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 Gene3D G3DSA:3.90.105.10 30 176 2.6E-149 T 11-10-2018 AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 SUPERFAMILY SSF53218 179 323 8.9E-45 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 Pfam PF03453 MoeA N-terminal region (domain I and II) 10 169 1.4E-46 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 Gene3D G3DSA:2.170.190.11 52 143 2.6E-149 T 11-10-2018 AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 SUPERFAMILY SSF63867 328 407 1.02E-22 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 Pfam PF00994 Probable molybdopterin binding domain 182 318 1.6E-28 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 Gene3D G3DSA:3.40.980.10 177 328 2.6E-149 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMS64_13395 1af6cd3d9d8315a51b514c2d5237c6b3 408 Gene3D G3DSA:2.40.340.10 329 398 2.6E-149 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_11570 13bd294de634570808aca8da1ab8da92 74 Gene3D G3DSA:2.10.290.10 2 72 1.6E-26 T 11-10-2018 IPR029037 YfgJ-like AMS64_11570 13bd294de634570808aca8da1ab8da92 74 Pfam PF07191 zinc-ribbons 5 70 3.0E-25 T 11-10-2018 IPR010807 Protein of unknown function DUF1407 AMS64_11570 13bd294de634570808aca8da1ab8da92 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 4 72 4.0E-13 T 11-10-2018 IPR010807 Protein of unknown function DUF1407 AMS64_11570 13bd294de634570808aca8da1ab8da92 74 SUPERFAMILY SSF161187 4 70 4.18E-25 T 11-10-2018 AMS64_15000 77c83a83578d889d5794b98d19ead896 220 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 77 5.6E-16 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMS64_15000 77c83a83578d889d5794b98d19ead896 220 Gene3D G3DSA:3.40.30.10 6 196 2.4E-86 T 11-10-2018 AMS64_15000 77c83a83578d889d5794b98d19ead896 220 SUPERFAMILY SSF52833 4 82 2.11E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_15000 77c83a83578d889d5794b98d19ead896 220 SUPERFAMILY SSF47616 74 202 5.18E-37 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMS64_15000 77c83a83578d889d5794b98d19ead896 220 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 192 9.1E-10 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMS64_15000 77c83a83578d889d5794b98d19ead896 220 Gene3D G3DSA:1.20.1050.10 83 191 2.4E-86 T 11-10-2018 AMS64_12710 29ddc00f00d45bc9fb9f28977c68975a 335 Pfam PF01032 FecCD transport family 23 328 2.3E-79 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMS64_12710 29ddc00f00d45bc9fb9f28977c68975a 335 Gene3D G3DSA:1.10.3470.10 3 330 4.4E-96 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_12710 29ddc00f00d45bc9fb9f28977c68975a 335 SUPERFAMILY SSF81345 7 329 7.59E-76 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 Gene3D G3DSA:1.10.10.60 419 476 1.7E-23 T 11-10-2018 AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 Gene3D G3DSA:1.10.10.1330 116 235 8.2E-24 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 4.8E-16 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 Pfam PF04963 Sigma-54 factor, core binding domain 114 305 1.1E-59 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 476 2.2E-158 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 PRINTS PR00045 Sigma-54 factor signature 452 470 9.3E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 PRINTS PR00045 Sigma-54 factor signature 394 405 9.3E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 PRINTS PR00045 Sigma-54 factor signature 378 390 9.3E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 PRINTS PR00045 Sigma-54 factor signature 188 205 9.3E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 366 385 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 Pfam PF04552 Sigma-54, DNA binding domain 319 477 2.8E-71 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 457 464 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMS64_02825 62fd0746e01d62913348281ae8c1c8f9 479 PIRSF PIRSF000774 1 479 2.5E-155 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMS64_17810 4d35bffe404d7374cfb101796e2c64c8 556 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 327 9.0E-24 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMS64_17810 4d35bffe404d7374cfb101796e2c64c8 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 535 2.2E-39 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMS64_17810 4d35bffe404d7374cfb101796e2c64c8 556 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 9 547 8.4E-248 T 11-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMS64_17810 4d35bffe404d7374cfb101796e2c64c8 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 173 1.0E-47 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMS64_17810 4d35bffe404d7374cfb101796e2c64c8 556 Gene3D G3DSA:3.40.50.970 362 555 2.7E-59 T 11-10-2018 AMS64_17810 4d35bffe404d7374cfb101796e2c64c8 556 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AMS64_17810 4d35bffe404d7374cfb101796e2c64c8 556 SUPERFAMILY SSF52518 366 547 1.38E-53 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_17810 4d35bffe404d7374cfb101796e2c64c8 556 SUPERFAMILY SSF52467 186 356 2.45E-33 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMS64_17810 4d35bffe404d7374cfb101796e2c64c8 556 SUPERFAMILY SSF52518 9 181 1.36E-46 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_17810 4d35bffe404d7374cfb101796e2c64c8 556 Gene3D G3DSA:3.40.50.1220 186 353 1.1E-33 T 11-10-2018 AMS64_17810 4d35bffe404d7374cfb101796e2c64c8 556 Gene3D G3DSA:3.40.50.970 1 183 1.4E-63 T 11-10-2018 AMS64_05690 f66a9899c1022ef96738d880e9b18695 177 Pfam PF13590 Domain of unknown function (DUF4136) 65 175 7.7E-10 T 11-10-2018 IPR025411 Domain of unknown function DUF4136 AMS64_08705 e3ffc7e28865bcba43520c2d2a0f6ceb 611 Gene3D G3DSA:3.30.450.40 11 140 2.7E-5 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_08705 e3ffc7e28865bcba43520c2d2a0f6ceb 611 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 295 308 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMS64_08705 e3ffc7e28865bcba43520c2d2a0f6ceb 611 SMART SM00382 291 435 4.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_08705 e3ffc7e28865bcba43520c2d2a0f6ceb 611 SUPERFAMILY SSF52540 271 511 1.23E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08705 e3ffc7e28865bcba43520c2d2a0f6ceb 611 Gene3D G3DSA:3.40.50.300 258 443 1.8E-67 T 11-10-2018 AMS64_08705 e3ffc7e28865bcba43520c2d2a0f6ceb 611 Gene3D G3DSA:1.10.8.60 444 526 5.5E-20 T 11-10-2018 AMS64_08705 e3ffc7e28865bcba43520c2d2a0f6ceb 611 Pfam PF02954 Bacterial regulatory protein, Fis family 566 605 9.2E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_08705 e3ffc7e28865bcba43520c2d2a0f6ceb 611 SUPERFAMILY SSF55781 20 124 3.53E-6 T 11-10-2018 AMS64_08705 e3ffc7e28865bcba43520c2d2a0f6ceb 611 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 485 494 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMS64_08705 e3ffc7e28865bcba43520c2d2a0f6ceb 611 SUPERFAMILY SSF46689 559 607 1.33E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_08705 e3ffc7e28865bcba43520c2d2a0f6ceb 611 Gene3D G3DSA:1.10.10.60 565 607 6.8E-14 T 11-10-2018 AMS64_08705 e3ffc7e28865bcba43520c2d2a0f6ceb 611 Pfam PF00158 Sigma-54 interaction domain 271 438 1.1E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_15330 4ccea6928880aaa43011c28628b78031 255 Gene3D G3DSA:3.40.190.10 116 210 5.5E-20 T 11-10-2018 AMS64_15330 4ccea6928880aaa43011c28628b78031 255 SUPERFAMILY SSF53850 34 249 9.96E-30 T 11-10-2018 AMS64_15330 4ccea6928880aaa43011c28628b78031 255 Gene3D G3DSA:3.40.190.10 36 249 5.5E-20 T 11-10-2018 AMS64_15330 4ccea6928880aaa43011c28628b78031 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 249 5.9E-19 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_17355 81c3318e7d4a2caabeb84d0fa4fbb87d 512 Gene3D G3DSA:3.30.70.270 338 506 1.4E-42 T 11-10-2018 AMS64_17355 81c3318e7d4a2caabeb84d0fa4fbb87d 512 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 503 9.7E-33 T 11-10-2018 IPR000160 GGDEF domain AMS64_17355 81c3318e7d4a2caabeb84d0fa4fbb87d 512 SUPERFAMILY SSF103190 184 246 8.11E-6 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMS64_17355 81c3318e7d4a2caabeb84d0fa4fbb87d 512 SUPERFAMILY SSF55073 356 506 7.22E-36 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_17355 81c3318e7d4a2caabeb84d0fa4fbb87d 512 SMART SM00267 340 507 1.1E-38 T 11-10-2018 IPR000160 GGDEF domain AMS64_17355 81c3318e7d4a2caabeb84d0fa4fbb87d 512 Gene3D G3DSA:3.30.450.20 136 245 5.4E-9 T 11-10-2018 AMS64_17355 81c3318e7d4a2caabeb84d0fa4fbb87d 512 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 348 505 5.2E-36 T 11-10-2018 IPR000160 GGDEF domain AMS64_04935 165b7a1e8a79389bc0d6b3cb9cbda1c4 295 Gene3D G3DSA:1.10.101.10 214 294 1.2E-20 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AMS64_04935 165b7a1e8a79389bc0d6b3cb9cbda1c4 295 SUPERFAMILY SSF47090 230 295 1.1E-16 T 11-10-2018 IPR036365 PGBD-like superfamily AMS64_04935 165b7a1e8a79389bc0d6b3cb9cbda1c4 295 Gene3D G3DSA:3.40.80.10 57 211 1.6E-45 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMS64_04935 165b7a1e8a79389bc0d6b3cb9cbda1c4 295 SUPERFAMILY SSF55846 42 207 5.63E-45 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMS64_04935 165b7a1e8a79389bc0d6b3cb9cbda1c4 295 SMART SM00644 47 198 5.1E-25 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMS64_04935 165b7a1e8a79389bc0d6b3cb9cbda1c4 295 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 57 199 1.5E-28 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMS64_01620 303abfc7ce29ac22d5d7c204e9dee6fc 584 SUPERFAMILY SSF58104 274 583 1.31E-72 T 11-10-2018 AMS64_01620 303abfc7ce29ac22d5d7c204e9dee6fc 584 Gene3D G3DSA:1.10.287.950 253 584 1.2E-70 T 11-10-2018 AMS64_01620 303abfc7ce29ac22d5d7c204e9dee6fc 584 SMART SM00304 252 306 1.5E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_01620 303abfc7ce29ac22d5d7c204e9dee6fc 584 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 549 4.1E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_01620 303abfc7ce29ac22d5d7c204e9dee6fc 584 SMART SM00283 321 582 1.6E-66 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_19815 6d0fc4a2cd4ab5080fc8275749221bef 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.5E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19815 6d0fc4a2cd4ab5080fc8275749221bef 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.5E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19815 6d0fc4a2cd4ab5080fc8275749221bef 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.5E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19815 6d0fc4a2cd4ab5080fc8275749221bef 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.5E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19815 6d0fc4a2cd4ab5080fc8275749221bef 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.633 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19815 6d0fc4a2cd4ab5080fc8275749221bef 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.5E-24 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19815 6d0fc4a2cd4ab5080fc8275749221bef 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_19815 6d0fc4a2cd4ab5080fc8275749221bef 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-14 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19815 6d0fc4a2cd4ab5080fc8275749221bef 71 Gene3D G3DSA:1.20.5.1150 16 54 2.8E-21 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19815 6d0fc4a2cd4ab5080fc8275749221bef 71 Pfam PF01165 Ribosomal protein S21 4 56 9.9E-22 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_04815 22edcff97381c7cefaae71d6a92193b1 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 59 6.2E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_04815 22edcff97381c7cefaae71d6a92193b1 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 6.2E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_04815 22edcff97381c7cefaae71d6a92193b1 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 6.2E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_04815 22edcff97381c7cefaae71d6a92193b1 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 29 6.2E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_04815 22edcff97381c7cefaae71d6a92193b1 302 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 14 278 1.1E-111 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 AMS64_04815 22edcff97381c7cefaae71d6a92193b1 302 Gene3D G3DSA:3.40.50.620 14 292 8.1E-107 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_04815 22edcff97381c7cefaae71d6a92193b1 302 SUPERFAMILY SSF52374 14 293 1.53E-84 T 11-10-2018 AMS64_04815 22edcff97381c7cefaae71d6a92193b1 302 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 14 298 41.355 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 AMS64_04815 22edcff97381c7cefaae71d6a92193b1 302 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 17 245 1.0E-39 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AMS64_04815 22edcff97381c7cefaae71d6a92193b1 302 Gene3D G3DSA:3.40.50.620 89 226 8.1E-107 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_10585 a1e1892e8dd5a373fbeb44a79807b749 246 Pfam PF12872 OST-HTH/LOTUS domain 163 229 9.6E-16 T 11-10-2018 IPR025605 OST-HTH/LOTUS domain AMS64_10585 a1e1892e8dd5a373fbeb44a79807b749 246 Pfam PF01936 NYN domain 7 141 4.3E-31 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type AMS64_10585 a1e1892e8dd5a373fbeb44a79807b749 246 Gene3D G3DSA:3.40.50.1010 1 144 3.8E-14 T 11-10-2018 AMS64_10585 a1e1892e8dd5a373fbeb44a79807b749 246 Gene3D G3DSA:1.10.10.1880 168 235 1.8E-22 T 11-10-2018 AMS64_08130 9d57372621db55e4e0ad9d1a2c978de9 760 Pfam PF01228 Glycine radical 630 741 1.3E-42 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 AMS64_08130 9d57372621db55e4e0ad9d1a2c978de9 760 SUPERFAMILY SSF51998 4 758 9.84E-288 T 11-10-2018 AMS64_08130 9d57372621db55e4e0ad9d1a2c978de9 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AMS64_08130 9d57372621db55e4e0ad9d1a2c978de9 760 Gene3D G3DSA:3.20.70.20 2 760 0.0 T 11-10-2018 AMS64_08130 9d57372621db55e4e0ad9d1a2c978de9 760 PIRSF PIRSF000379 8 760 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AMS64_08130 9d57372621db55e4e0ad9d1a2c978de9 760 Pfam PF02901 Pyruvate formate lyase-like 26 614 3.3E-200 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AMS64_08130 9d57372621db55e4e0ad9d1a2c978de9 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AMS64_14305 7a09a7af9f71d1e279fd69dcaa44c982 197 Pfam PF00925 GTP cyclohydrolase II 8 171 1.2E-69 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMS64_14305 7a09a7af9f71d1e279fd69dcaa44c982 197 SUPERFAMILY SSF142695 3 173 1.7E-67 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMS64_14305 7a09a7af9f71d1e279fd69dcaa44c982 197 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 2 197 45.188 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMS64_14305 7a09a7af9f71d1e279fd69dcaa44c982 197 Gene3D G3DSA:3.40.50.10990 3 174 3.0E-75 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMS64_14305 7a09a7af9f71d1e279fd69dcaa44c982 197 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 195 4.4E-82 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMS64_21060 31916abfbea9e233ca7fdc255378cc7d 600 SUPERFAMILY SSF53092 8 132 2.79E-13 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMS64_21060 31916abfbea9e233ca7fdc255378cc7d 600 SUPERFAMILY SSF55920 309 566 1.83E-61 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AMS64_21060 31916abfbea9e233ca7fdc255378cc7d 600 Gene3D G3DSA:3.40.350.10 150 298 6.3E-26 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMS64_21060 31916abfbea9e233ca7fdc255378cc7d 600 Gene3D G3DSA:3.40.350.10 4 149 6.8E-40 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMS64_21060 31916abfbea9e233ca7fdc255378cc7d 600 Gene3D G3DSA:3.90.230.10 306 600 1.1E-99 T 11-10-2018 AMS64_21060 31916abfbea9e233ca7fdc255378cc7d 600 Pfam PF16189 Creatinase/Prolidase N-terminal domain 151 312 7.9E-34 T 11-10-2018 AMS64_21060 31916abfbea9e233ca7fdc255378cc7d 600 Pfam PF16188 C-terminal region of peptidase_M24 541 598 3.4E-23 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain AMS64_21060 31916abfbea9e233ca7fdc255378cc7d 600 Pfam PF00557 Metallopeptidase family M24 315 532 6.2E-46 T 11-10-2018 IPR000994 Peptidase M24 AMS64_21060 31916abfbea9e233ca7fdc255378cc7d 600 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 141 3.9E-18 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AMS64_13880 a763e17bf5c85cfc1e99846f90b2f3a3 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 3.1E-28 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_13880 a763e17bf5c85cfc1e99846f90b2f3a3 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 3.1E-28 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_13880 a763e17bf5c85cfc1e99846f90b2f3a3 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 3.1E-28 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_13880 a763e17bf5c85cfc1e99846f90b2f3a3 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 3.1E-28 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_13880 a763e17bf5c85cfc1e99846f90b2f3a3 262 Pfam PF01311 Bacterial export proteins, family 1 11 244 5.8E-53 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_13880 a763e17bf5c85cfc1e99846f90b2f3a3 262 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 4 256 4.0E-82 T 11-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 AMS64_10195 802d83015855902c7adc1d102d62eed7 421 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 415 47.985 T 11-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AMS64_10195 802d83015855902c7adc1d102d62eed7 421 Gene3D G3DSA:3.30.9.10 134 363 1.4E-51 T 11-10-2018 AMS64_10195 802d83015855902c7adc1d102d62eed7 421 Gene3D G3DSA:3.50.50.60 97 403 1.4E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_10195 802d83015855902c7adc1d102d62eed7 421 SUPERFAMILY SSF51905 1 420 2.07E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_10195 802d83015855902c7adc1d102d62eed7 421 Gene3D G3DSA:3.50.50.60 1 75 9.9E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_10195 802d83015855902c7adc1d102d62eed7 421 Pfam PF01266 FAD dependent oxidoreductase 3 402 1.8E-74 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMS64_10195 802d83015855902c7adc1d102d62eed7 421 SUPERFAMILY SSF54373 274 364 2.09E-18 T 11-10-2018 AMS64_07080 35fca50d1ded9728477e0880f5b78673 160 Gene3D G3DSA:3.40.630.30 2 156 3.4E-35 T 11-10-2018 AMS64_07080 35fca50d1ded9728477e0880f5b78673 160 Pfam PF00583 Acetyltransferase (GNAT) family 45 146 4.6E-12 T 11-10-2018 IPR000182 GNAT domain AMS64_07080 35fca50d1ded9728477e0880f5b78673 160 SUPERFAMILY SSF55729 1 150 1.47E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_11315 b6551a48feadcd3c055a20585e7b13bf 143 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 142 1.1E-40 T 11-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein AMS64_11315 b6551a48feadcd3c055a20585e7b13bf 143 Gene3D G3DSA:3.10.450.40 29 137 3.5E-11 T 11-10-2018 AMS64_11315 b6551a48feadcd3c055a20585e7b13bf 143 Pfam PF04965 Gene 25-like lysozyme 34 121 1.0E-18 T 11-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AMS64_11315 b6551a48feadcd3c055a20585e7b13bf 143 SUPERFAMILY SSF160719 34 136 6.15E-21 T 11-10-2018 AMS64_08860 a7a7cb80dc455377a0b045440924d2b5 396 PRINTS PR00173 Glutamate-aspartate symporter signature 28 48 7.5E-51 T 11-10-2018 AMS64_08860 a7a7cb80dc455377a0b045440924d2b5 396 PRINTS PR00173 Glutamate-aspartate symporter signature 338 358 7.5E-51 T 11-10-2018 AMS64_08860 a7a7cb80dc455377a0b045440924d2b5 396 PRINTS PR00173 Glutamate-aspartate symporter signature 127 149 7.5E-51 T 11-10-2018 AMS64_08860 a7a7cb80dc455377a0b045440924d2b5 396 PRINTS PR00173 Glutamate-aspartate symporter signature 58 83 7.5E-51 T 11-10-2018 AMS64_08860 a7a7cb80dc455377a0b045440924d2b5 396 PRINTS PR00173 Glutamate-aspartate symporter signature 175 194 7.5E-51 T 11-10-2018 AMS64_08860 a7a7cb80dc455377a0b045440924d2b5 396 PRINTS PR00173 Glutamate-aspartate symporter signature 312 331 7.5E-51 T 11-10-2018 AMS64_08860 a7a7cb80dc455377a0b045440924d2b5 396 PRINTS PR00173 Glutamate-aspartate symporter signature 210 229 7.5E-51 T 11-10-2018 AMS64_08860 a7a7cb80dc455377a0b045440924d2b5 396 PRINTS PR00173 Glutamate-aspartate symporter signature 277 303 7.5E-51 T 11-10-2018 AMS64_08860 a7a7cb80dc455377a0b045440924d2b5 396 SUPERFAMILY SSF118215 1 384 1.03E-105 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_08860 a7a7cb80dc455377a0b045440924d2b5 396 Pfam PF00375 Sodium:dicarboxylate symporter family 1 383 2.7E-112 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMS64_08860 a7a7cb80dc455377a0b045440924d2b5 396 Gene3D G3DSA:1.10.3860.10 1 396 4.2E-117 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_14405 083536f11bafae12c6eb7284e85027b7 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 262 8.2E-51 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_14405 083536f11bafae12c6eb7284e85027b7 273 SMART SM00062 41 264 2.0E-42 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_14405 083536f11bafae12c6eb7284e85027b7 273 SMART SM00079 41 263 0.004 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AMS64_14405 083536f11bafae12c6eb7284e85027b7 273 Gene3D G3DSA:3.40.190.10 35 251 1.1E-60 T 11-10-2018 AMS64_14405 083536f11bafae12c6eb7284e85027b7 273 Gene3D G3DSA:3.40.190.10 127 218 1.1E-60 T 11-10-2018 AMS64_14405 083536f11bafae12c6eb7284e85027b7 273 SUPERFAMILY SSF53850 11 262 5.25E-58 T 11-10-2018 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 124 153 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 397 627 7.4E-79 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 Gene3D G3DSA:2.40.50.100 1 80 1.3E-19 T 11-10-2018 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 Gene3D G3DSA:2.40.50.100 201 279 6.7E-22 T 11-10-2018 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 Gene3D G3DSA:2.40.50.100 100 178 9.9E-19 T 11-10-2018 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 SUPERFAMILY SSF51230 102 191 4.84E-21 T 11-10-2018 IPR011053 Single hybrid motif AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 Gene3D G3DSA:4.10.320.10 322 367 6.6E-22 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 SUPERFAMILY SSF51230 202 290 9.03E-23 T 11-10-2018 IPR011053 Single hybrid motif AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 225 254 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 Gene3D G3DSA:3.30.559.10 382 628 1.2E-97 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 Pfam PF02817 e3 binding domain 322 357 4.8E-16 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 188 628 1.9E-207 T 11-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 SUPERFAMILY SSF47005 316 361 2.22E-13 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 Pfam PF00364 Biotin-requiring enzyme 3 73 6.5E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 Pfam PF00364 Biotin-requiring enzyme 103 172 1.9E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 Pfam PF00364 Biotin-requiring enzyme 203 273 6.9E-22 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 SUPERFAMILY SSF51230 2 93 2.9E-21 T 11-10-2018 IPR011053 Single hybrid motif AMS64_03355 c03afad954336889b0d69bddb8c7d77d 628 SUPERFAMILY SSF52777 386 627 8.01E-81 T 11-10-2018 AMS64_01640 32f9206760f7c32392c936e593f82cc0 609 Gene3D G3DSA:2.60.40.1180 522 608 5.4E-19 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMS64_01640 32f9206760f7c32392c936e593f82cc0 609 PIRSF PIRSF036918 1 609 3.3E-243 T 11-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 AMS64_01640 32f9206760f7c32392c936e593f82cc0 609 SUPERFAMILY SSF81296 1 110 1.82E-15 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_01640 32f9206760f7c32392c936e593f82cc0 609 SUPERFAMILY SSF51445 115 527 2.54E-105 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_01640 32f9206760f7c32392c936e593f82cc0 609 Gene3D G3DSA:2.60.40.10 9 112 3.2E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_01640 32f9206760f7c32392c936e593f82cc0 609 Gene3D G3DSA:3.20.20.80 115 520 2.7E-143 T 11-10-2018 AMS64_01640 32f9206760f7c32392c936e593f82cc0 609 Pfam PF16657 Maltogenic Amylase, C-terminal domain 527 604 6.2E-7 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal AMS64_01640 32f9206760f7c32392c936e593f82cc0 609 SMART SM00642 127 518 3.3E-96 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_01640 32f9206760f7c32392c936e593f82cc0 609 Pfam PF00128 Alpha amylase, catalytic domain 178 490 2.5E-76 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_01640 32f9206760f7c32392c936e593f82cc0 609 SUPERFAMILY SSF51011 532 606 1.14E-14 T 11-10-2018 AMS64_18780 8fd7290a5efa35aa18e90d44e1d3f2e4 152 SUPERFAMILY SSF74942 84 151 1.14E-17 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AMS64_18780 8fd7290a5efa35aa18e90d44e1d3f2e4 152 Gene3D G3DSA:3.30.300.70 1 80 4.7E-26 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily AMS64_18780 8fd7290a5efa35aa18e90d44e1d3f2e4 152 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.0E-18 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AMS64_18780 8fd7290a5efa35aa18e90d44e1d3f2e4 152 Pfam PF02576 RimP N-terminal domain 12 83 1.1E-27 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AMS64_18780 8fd7290a5efa35aa18e90d44e1d3f2e4 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.655 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AMS64_18780 8fd7290a5efa35aa18e90d44e1d3f2e4 152 SUPERFAMILY SSF75420 3 83 1.57E-25 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 420 469 7.3E-13 T 11-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 1.9E-26 T 11-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 Gene3D G3DSA:3.40.50.150 2 310 3.1E-95 T 11-10-2018 AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 474 64.105 T 11-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 310 4.4E-94 T 11-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 Gene3D G3DSA:2.30.130.90 312 476 1.1E-54 T 11-10-2018 AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 SUPERFAMILY SSF53335 7 310 1.1E-62 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 189 201 2.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 293 310 2.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 2.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 239 255 2.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 122 132 2.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_09735 cc833ca6b988a58b4c7463d547f7413a 476 Pfam PF01189 16S rRNA methyltransferase RsmB/F 117 309 9.4E-48 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AMS64_16600 b81592eb98e85966aa3bc2947afef3ea 353 Pfam PF01757 Acyltransferase family 4 337 1.1E-21 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMS64_21760 e6175d1a57752e8db8507a9b07144633 142 SUPERFAMILY SSF46906 68 141 9.29E-26 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AMS64_21760 e6175d1a57752e8db8507a9b07144633 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 6.0E-15 T 11-10-2018 AMS64_21760 e6175d1a57752e8db8507a9b07144633 142 SUPERFAMILY SSF54747 3 73 1.31E-29 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AMS64_21760 e6175d1a57752e8db8507a9b07144633 142 Gene3D G3DSA:1.10.10.2720 73 142 2.0E-27 T 11-10-2018 AMS64_21760 e6175d1a57752e8db8507a9b07144633 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 6.9E-65 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_21760 e6175d1a57752e8db8507a9b07144633 142 Gene3D G3DSA:3.30.1550.10 2 72 3.6E-34 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AMS64_21760 e6175d1a57752e8db8507a9b07144633 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_21760 e6175d1a57752e8db8507a9b07144633 142 SMART SM00649 9 141 6.5E-83 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMS64_21760 e6175d1a57752e8db8507a9b07144633 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 9.7E-29 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal AMS64_21760 e6175d1a57752e8db8507a9b07144633 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.2E-24 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMS64_21760 e6175d1a57752e8db8507a9b07144633 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.734 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMS64_08750 7a58839771c488f919dd5b313d1226a0 205 Gene3D G3DSA:2.40.30.20 1 90 7.9E-29 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_08750 7a58839771c488f919dd5b313d1226a0 205 Pfam PF00677 Lumazine binding domain 101 185 2.0E-18 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_08750 7a58839771c488f919dd5b313d1226a0 205 Pfam PF00677 Lumazine binding domain 3 88 2.2E-20 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_08750 7a58839771c488f919dd5b313d1226a0 205 Gene3D G3DSA:2.40.30.20 95 191 5.1E-26 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_08750 7a58839771c488f919dd5b313d1226a0 205 SUPERFAMILY SSF63380 1 94 2.98E-27 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_08750 7a58839771c488f919dd5b313d1226a0 205 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 1.8E-70 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_08750 7a58839771c488f919dd5b313d1226a0 205 SUPERFAMILY SSF63380 94 199 9.35E-28 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_08750 7a58839771c488f919dd5b313d1226a0 205 PIRSF PIRSF000498 1 204 6.8E-67 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_09100 bc55cb62995e573d8c562e8d5258b5a0 356 Pfam PF00155 Aminotransferase class I and II 44 345 4.0E-51 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMS64_09100 bc55cb62995e573d8c562e8d5258b5a0 356 Gene3D G3DSA:3.90.1150.10 6 343 5.8E-123 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_09100 bc55cb62995e573d8c562e8d5258b5a0 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 208 217 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AMS64_09100 bc55cb62995e573d8c562e8d5258b5a0 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 352 54.272 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AMS64_09100 bc55cb62995e573d8c562e8d5258b5a0 356 Gene3D G3DSA:3.40.640.10 51 255 5.8E-123 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_09100 bc55cb62995e573d8c562e8d5258b5a0 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 350 1.5E-111 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AMS64_09100 bc55cb62995e573d8c562e8d5258b5a0 356 SUPERFAMILY SSF53383 5 350 4.68E-75 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 3 612 4.4E-222 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 419 441 8.4E-10 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 8.4E-10 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 267 289 8.4E-10 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 60 84 8.4E-10 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 1.2E-53 T 11-10-2018 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 249 275 1.2E-53 T 11-10-2018 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 227 248 1.2E-53 T 11-10-2018 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 1.2E-53 T 11-10-2018 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 1.2E-53 T 11-10-2018 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 317 329 1.2E-53 T 11-10-2018 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 1.2E-53 T 11-10-2018 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 Pfam PF00361 Proton-conducting membrane transporter 135 427 2.4E-90 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14545 90a5633bdb552c4eb3e034c2a8773add 615 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 123 1.5E-20 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_06925 056504f5b40de83431b1560be1fdc36f 407 SUPERFAMILY SSF103473 12 393 1.83E-45 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_06925 056504f5b40de83431b1560be1fdc36f 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMS64_06925 056504f5b40de83431b1560be1fdc36f 407 Pfam PF07690 Major Facilitator Superfamily 16 349 7.7E-33 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_06925 056504f5b40de83431b1560be1fdc36f 407 Gene3D G3DSA:1.20.1250.20 10 388 1.1E-41 T 11-10-2018 AMS64_17380 beb76723290b0ae7b05b37ee94422568 466 Gene3D G3DSA:1.10.443.10 182 433 6.3E-14 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_17380 beb76723290b0ae7b05b37ee94422568 466 Pfam PF00589 Phage integrase family 339 429 9.2E-8 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_17380 beb76723290b0ae7b05b37ee94422568 466 SUPERFAMILY SSF56349 210 432 1.15E-15 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_05215 beb76723290b0ae7b05b37ee94422568 466 Gene3D G3DSA:1.10.443.10 182 433 6.3E-14 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_05215 beb76723290b0ae7b05b37ee94422568 466 Pfam PF00589 Phage integrase family 339 429 9.2E-8 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_05215 beb76723290b0ae7b05b37ee94422568 466 SUPERFAMILY SSF56349 210 432 1.15E-15 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_16770 beb76723290b0ae7b05b37ee94422568 466 Gene3D G3DSA:1.10.443.10 182 433 6.3E-14 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_16770 beb76723290b0ae7b05b37ee94422568 466 Pfam PF00589 Phage integrase family 339 429 9.2E-8 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_16770 beb76723290b0ae7b05b37ee94422568 466 SUPERFAMILY SSF56349 210 432 1.15E-15 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_22365 dcf4f63d7e9a7d4973e4293870ebe6d3 480 Pfam PF02386 Cation transport protein 60 474 5.5E-56 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AMS64_22365 dcf4f63d7e9a7d4973e4293870ebe6d3 480 PIRSF PIRSF006247 1 480 7.6E-166 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AMS64_22365 dcf4f63d7e9a7d4973e4293870ebe6d3 480 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 463 3.7E-110 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AMS64_02005 47eb4ce8892defd3f7df4b89f9d1fb84 82 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.419 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_02005 47eb4ce8892defd3f7df4b89f9d1fb84 82 Pfam PF00366 Ribosomal protein S17 10 76 3.0E-34 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_02005 47eb4ce8892defd3f7df4b89f9d1fb84 82 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 8.6E-14 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_02005 47eb4ce8892defd3f7df4b89f9d1fb84 82 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 8.6E-14 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_02005 47eb4ce8892defd3f7df4b89f9d1fb84 82 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 8.6E-14 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_02005 47eb4ce8892defd3f7df4b89f9d1fb84 82 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.7E-39 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_02005 47eb4ce8892defd3f7df4b89f9d1fb84 82 SUPERFAMILY SSF50249 5 82 1.33E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_02005 47eb4ce8892defd3f7df4b89f9d1fb84 82 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 3.0E-33 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_02005 47eb4ce8892defd3f7df4b89f9d1fb84 82 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02005 47eb4ce8892defd3f7df4b89f9d1fb84 82 Gene3D G3DSA:2.40.50.140 1 82 5.7E-39 T 11-10-2018 AMS64_16815 7bdca4dd3228228a10d754fd9b7d3bb5 424 SUPERFAMILY SSF53686 1 423 1.83E-128 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMS64_16815 7bdca4dd3228228a10d754fd9b7d3bb5 424 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 367 1.2E-22 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMS64_16815 7bdca4dd3228228a10d754fd9b7d3bb5 424 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMS64_16815 7bdca4dd3228228a10d754fd9b7d3bb5 424 Gene3D G3DSA:3.90.1380.10 1 79 3.3E-26 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily AMS64_16815 7bdca4dd3228228a10d754fd9b7d3bb5 424 TIGRFAM TIGR00260 thrC: threonine synthase 64 387 5.1E-112 T 11-10-2018 IPR004450 Threonine synthase-like AMS64_16815 7bdca4dd3228228a10d754fd9b7d3bb5 424 Gene3D G3DSA:3.40.50.1100 101 399 1.1E-136 T 11-10-2018 AMS64_16815 7bdca4dd3228228a10d754fd9b7d3bb5 424 Pfam PF14821 Threonine synthase N terminus 7 78 1.2E-7 T 11-10-2018 IPR029144 Threonine synthase, N-terminal AMS64_16815 7bdca4dd3228228a10d754fd9b7d3bb5 424 Gene3D G3DSA:3.40.50.1100 83 392 1.1E-136 T 11-10-2018 AMS64_00150 67a162feca09808bf5b8c7aac0c770f2 300 SUPERFAMILY SSF53850 85 290 1.12E-28 T 11-10-2018 AMS64_00150 67a162feca09808bf5b8c7aac0c770f2 300 SUPERFAMILY SSF46785 3 88 2.45E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_00150 67a162feca09808bf5b8c7aac0c770f2 300 Gene3D G3DSA:3.40.190.290 91 300 2.8E-14 T 11-10-2018 AMS64_00150 67a162feca09808bf5b8c7aac0c770f2 300 Pfam PF03466 LysR substrate binding domain 91 293 3.8E-20 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_00150 67a162feca09808bf5b8c7aac0c770f2 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.3E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_00150 67a162feca09808bf5b8c7aac0c770f2 300 Gene3D G3DSA:1.10.10.10 1 86 1.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_00150 67a162feca09808bf5b8c7aac0c770f2 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_00150 67a162feca09808bf5b8c7aac0c770f2 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_00150 67a162feca09808bf5b8c7aac0c770f2 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_16805 28ff1a779efff9f4d6c53ff3d776408c 233 Gene3D G3DSA:3.40.50.1580 2 233 3.7E-70 T 11-10-2018 AMS64_16805 28ff1a779efff9f4d6c53ff3d776408c 233 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 233 45.408 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AMS64_16805 28ff1a779efff9f4d6c53ff3d776408c 233 Pfam PF01048 Phosphorylase superfamily 15 218 8.0E-35 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMS64_16805 28ff1a779efff9f4d6c53ff3d776408c 233 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 232 3.9E-92 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AMS64_16805 28ff1a779efff9f4d6c53ff3d776408c 233 SUPERFAMILY SSF53167 2 232 4.84E-84 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 SUPERFAMILY SSF50156 381 449 6.44E-15 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 Gene3D G3DSA:2.30.42.10 262 365 1.3E-29 T 11-10-2018 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 Pfam PF13365 Trypsin-like peptidase domain 93 228 1.1E-30 T 11-10-2018 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 SUPERFAMILY SSF50494 35 276 5.75E-63 T 11-10-2018 IPR009003 Peptidase S1, PA clan AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 Gene3D G3DSA:2.30.42.10 366 453 1.4E-26 T 11-10-2018 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 451 3.8E-159 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 SMART SM00228 374 445 2.4E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 SMART SM00228 267 349 4.9E-17 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 Pfam PF13180 PDZ domain 268 358 2.3E-17 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 Pfam PF13180 PDZ domain 383 445 5.0E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 SUPERFAMILY SSF50156 233 350 2.4E-24 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 Gene3D G3DSA:2.40.10.120 38 261 5.0E-85 T 11-10-2018 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.4E-55 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.4E-55 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.4E-55 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 PRINTS PR00834 HtrA/DegQ protease family signature 124 144 1.4E-55 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.4E-55 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMS64_02900 885aff786e9f2625a8b2d3126771e640 453 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 1.4E-55 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMS64_00560 7409a312690de1d1ab58ec1f39c4f43d 142 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 86 3.2E-28 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00560 7409a312690de1d1ab58ec1f39c4f43d 142 SUPERFAMILY SSF46604 90 138 1.91E-14 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00560 7409a312690de1d1ab58ec1f39c4f43d 142 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 4.7E-13 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain AMS64_00560 7409a312690de1d1ab58ec1f39c4f43d 142 SUPERFAMILY SSF51344 7 88 9.94E-24 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00560 7409a312690de1d1ab58ec1f39c4f43d 142 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 7 134 5.4E-43 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00560 7409a312690de1d1ab58ec1f39c4f43d 142 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 12 92 2.0E-29 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00560 7409a312690de1d1ab58ec1f39c4f43d 142 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 5 133 20.746 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00560 7409a312690de1d1ab58ec1f39c4f43d 142 Gene3D G3DSA:1.20.5.440 93 135 3.7E-19 T 11-10-2018 AMS64_00560 7409a312690de1d1ab58ec1f39c4f43d 142 Gene3D G3DSA:2.60.15.10 5 92 3.6E-30 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_03025 58e75ad3bbc3b93592ffbc1344b14d83 378 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 4.8E-111 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_03025 58e75ad3bbc3b93592ffbc1344b14d83 378 SUPERFAMILY SSF160544 252 353 8.37E-32 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AMS64_03025 58e75ad3bbc3b93592ffbc1344b14d83 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.0E-30 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_03025 58e75ad3bbc3b93592ffbc1344b14d83 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.0E-30 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_03025 58e75ad3bbc3b93592ffbc1344b14d83 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.0E-30 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_03025 58e75ad3bbc3b93592ffbc1344b14d83 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.0E-30 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_03025 58e75ad3bbc3b93592ffbc1344b14d83 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.0E-30 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_03025 58e75ad3bbc3b93592ffbc1344b14d83 378 Gene3D G3DSA:3.40.1690.10 217 357 1.6E-48 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AMS64_03025 58e75ad3bbc3b93592ffbc1344b14d83 378 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 3.1E-110 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AMS64_13955 e5df8ff0ccae86155a18999de9376438 401 SUPERFAMILY SSF103473 5 385 3.01E-40 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_13955 e5df8ff0ccae86155a18999de9376438 401 Pfam PF07690 Major Facilitator Superfamily 9 265 9.0E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_13955 e5df8ff0ccae86155a18999de9376438 401 Gene3D G3DSA:1.20.1250.20 3 386 1.2E-37 T 11-10-2018 AMS64_07550 ff50155fc6c682305224f2b3a517acd3 212 Gene3D G3DSA:2.30.110.10 14 212 1.2E-78 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMS64_07550 ff50155fc6c682305224f2b3a517acd3 212 PIRSF PIRSF000190 1 212 2.4E-80 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMS64_07550 ff50155fc6c682305224f2b3a517acd3 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 212 5.5E-94 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMS64_07550 ff50155fc6c682305224f2b3a517acd3 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 116 2.2E-23 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMS64_07550 ff50155fc6c682305224f2b3a517acd3 212 SUPERFAMILY SSF50475 15 212 7.48E-69 T 11-10-2018 AMS64_07550 ff50155fc6c682305224f2b3a517acd3 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 212 38.698 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMS64_07550 ff50155fc6c682305224f2b3a517acd3 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 182 195 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMS64_07550 ff50155fc6c682305224f2b3a517acd3 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 172 212 1.7E-19 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMS64_12900 f9fcf779470eba4721d7a8f9afab0ea7 401 PIRSF PIRSF000018 1 400 2.3E-129 T 11-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AMS64_12900 f9fcf779470eba4721d7a8f9afab0ea7 401 Gene3D G3DSA:1.10.760.10 3 130 2.8E-9 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_12900 f9fcf779470eba4721d7a8f9afab0ea7 401 SUPERFAMILY SSF46626 13 148 5.62E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_12900 f9fcf779470eba4721d7a8f9afab0ea7 401 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 26 124 8.4E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_12900 f9fcf779470eba4721d7a8f9afab0ea7 401 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 293 372 1.7E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_12900 f9fcf779470eba4721d7a8f9afab0ea7 401 SUPERFAMILY SSF46626 171 277 1.82E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_12900 f9fcf779470eba4721d7a8f9afab0ea7 401 Gene3D G3DSA:1.10.760.10 164 277 1.7E-9 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_12900 f9fcf779470eba4721d7a8f9afab0ea7 401 SUPERFAMILY SSF46626 293 395 2.7E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_12900 f9fcf779470eba4721d7a8f9afab0ea7 401 Gene3D G3DSA:1.10.760.10 278 400 9.5E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_11485 fb9723c21ea9002da11b6d2ab2fd8192 279 PRINTS PR00410 Phenol hydroxylase reductase family signature 121 140 2.9E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMS64_11485 fb9723c21ea9002da11b6d2ab2fd8192 279 PRINTS PR00410 Phenol hydroxylase reductase family signature 49 61 2.9E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMS64_11485 fb9723c21ea9002da11b6d2ab2fd8192 279 Gene3D G3DSA:2.40.30.10 23 108 1.4E-8 T 11-10-2018 AMS64_11485 fb9723c21ea9002da11b6d2ab2fd8192 279 PIRSF PIRSF006816 20 279 2.8E-70 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 AMS64_11485 fb9723c21ea9002da11b6d2ab2fd8192 279 TIGRFAM TIGR02911 sulfite_red_B: sulfite reductase, subunit B 19 279 2.7E-123 T 11-10-2018 IPR014260 Sulphite reductase, subunit B AMS64_11485 fb9723c21ea9002da11b6d2ab2fd8192 279 SUPERFAMILY SSF63380 23 110 1.22E-15 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_11485 fb9723c21ea9002da11b6d2ab2fd8192 279 Gene3D G3DSA:3.40.50.80 111 242 1.5E-18 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_11485 fb9723c21ea9002da11b6d2ab2fd8192 279 Pfam PF00175 Oxidoreductase NAD-binding domain 123 223 6.0E-16 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMS64_11485 fb9723c21ea9002da11b6d2ab2fd8192 279 SUPERFAMILY SSF52343 117 257 1.7E-27 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_11485 fb9723c21ea9002da11b6d2ab2fd8192 279 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 242 273 1.1E-9 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain AMS64_19420 d3d7f460ecc8fba4c318efa1ce0b8ff8 298 Gene3D G3DSA:1.10.20.140 104 175 1.6E-104 T 11-10-2018 AMS64_19420 d3d7f460ecc8fba4c318efa1ce0b8ff8 298 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 1 283 8.1E-110 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AMS64_19420 d3d7f460ecc8fba4c318efa1ce0b8ff8 298 Pfam PF01715 IPP transferase 31 276 1.4E-84 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AMS64_19420 d3d7f460ecc8fba4c318efa1ce0b8ff8 298 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 1 293 27.987 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AMS64_19420 d3d7f460ecc8fba4c318efa1ce0b8ff8 298 Gene3D G3DSA:3.40.50.300 1 280 1.6E-104 T 11-10-2018 AMS64_19420 d3d7f460ecc8fba4c318efa1ce0b8ff8 298 SUPERFAMILY SSF52540 1 140 8.46E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_16275 7c5798035c29841f70f1f3f90d088bb1 466 Gene3D G3DSA:3.30.930.10 109 464 2.0E-110 T 11-10-2018 AMS64_16275 7c5798035c29841f70f1f3f90d088bb1 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 5.4E-81 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_16275 7c5798035c29841f70f1f3f90d088bb1 466 Gene3D G3DSA:2.40.50.140 1 104 1.4E-17 T 11-10-2018 AMS64_16275 7c5798035c29841f70f1f3f90d088bb1 466 Pfam PF01336 OB-fold nucleic acid binding domain 21 99 5.2E-9 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMS64_16275 7c5798035c29841f70f1f3f90d088bb1 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 5.5E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_16275 7c5798035c29841f70f1f3f90d088bb1 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 5.5E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_16275 7c5798035c29841f70f1f3f90d088bb1 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 5.5E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_16275 7c5798035c29841f70f1f3f90d088bb1 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 5.5E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_16275 7c5798035c29841f70f1f3f90d088bb1 466 SUPERFAMILY SSF50249 15 101 1.98E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_16275 7c5798035c29841f70f1f3f90d088bb1 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 466 45.941 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AMS64_16275 7c5798035c29841f70f1f3f90d088bb1 466 SUPERFAMILY SSF55681 96 463 8.5E-98 T 11-10-2018 AMS64_16275 7c5798035c29841f70f1f3f90d088bb1 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 6.3E-205 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 Pfam PF00702 haloacid dehalogenase-like hydrolase 503 718 1.8E-39 T 11-10-2018 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 ProSitePatterns PS01229 Hypothetical cof family signature 2. 705 727 - T 11-10-2018 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 356 370 7.7E-28 T 11-10-2018 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 654 664 7.7E-28 T 11-10-2018 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 724 7.7E-28 T 11-10-2018 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 643 7.7E-28 T 11-10-2018 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 728 740 7.7E-28 T 11-10-2018 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 7.7E-28 T 11-10-2018 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 SUPERFAMILY SSF81653 316 406 1.7E-19 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 SUPERFAMILY SSF56784 505 805 6.6E-48 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 SUPERFAMILY SSF55008 105 174 1.7E-14 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 Pfam PF00403 Heavy-metal-associated domain 114 160 6.1E-9 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 ProSitePatterns PS01047 Heavy-metal-associated domain. 114 143 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 Gene3D G3DSA:3.30.70.100 111 174 5.3E-14 T 11-10-2018 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 276 784 1.5E-70 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 252 809 2.5E-147 T 11-10-2018 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 705 721 1.4E-5 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 736 761 1.4E-5 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 Gene3D G3DSA:3.40.50.1000 488 756 1.9E-81 T 11-10-2018 IPR023214 HAD superfamily AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 252 807 3.3E-172 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 SUPERFAMILY SSF81665 255 803 8.76E-19 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 Gene3D G3DSA:2.70.150.20 302 411 6.1E-30 T 11-10-2018 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 Pfam PF00122 E1-E2 ATPase 305 486 1.4E-45 T 11-10-2018 AMS64_20500 d41a1bf1923e558674f2f88409feb534 811 Gene3D G3DSA:3.40.1110.10 518 639 1.9E-81 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMS64_21720 5492b76756a3c590bec0586b0e036ab1 130 Gene3D G3DSA:3.40.1260.10 1 130 1.6E-49 T 11-10-2018 IPR027396 DsrEFH-like AMS64_21720 5492b76756a3c590bec0586b0e036ab1 130 SUPERFAMILY SSF75169 1 130 7.74E-36 T 11-10-2018 IPR027396 DsrEFH-like AMS64_21720 5492b76756a3c590bec0586b0e036ab1 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 130 3.0E-50 T 11-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AMS64_21720 5492b76756a3c590bec0586b0e036ab1 130 Pfam PF02635 DsrE/DsrF-like family 5 130 2.3E-28 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AMS64_16965 736862bf9a1a428753a8475403cb05fc 159 Gene3D G3DSA:3.50.30.40 1 158 2.8E-58 T 11-10-2018 AMS64_16965 736862bf9a1a428753a8475403cb05fc 159 Pfam PF03737 Aldolase/RraA 6 153 7.2E-40 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AMS64_16965 736862bf9a1a428753a8475403cb05fc 159 TIGRFAM TIGR01935 NOT-MenG: RraA family 6 154 9.7E-63 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AMS64_16965 736862bf9a1a428753a8475403cb05fc 159 SUPERFAMILY SSF89562 6 154 6.02E-45 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AMS64_04565 5ddaa7f031f9f94bfa03d3255316681f 437 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04565 5ddaa7f031f9f94bfa03d3255316681f 437 SUPERFAMILY SSF161070 5 436 1.2E-118 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AMS64_04565 5ddaa7f031f9f94bfa03d3255316681f 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 5.7E-14 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04565 5ddaa7f031f9f94bfa03d3255316681f 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 412 431 5.7E-14 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04565 5ddaa7f031f9f94bfa03d3255316681f 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 5.7E-14 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04565 5ddaa7f031f9f94bfa03d3255316681f 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 309 329 5.7E-14 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04565 5ddaa7f031f9f94bfa03d3255316681f 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 85 111 5.7E-14 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04565 5ddaa7f031f9f94bfa03d3255316681f 437 Pfam PF00209 Sodium:neurotransmitter symporter family 151 436 2.0E-28 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04565 5ddaa7f031f9f94bfa03d3255316681f 437 Pfam PF00209 Sodium:neurotransmitter symporter family 5 121 2.8E-23 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 SUPERFAMILY SSF52540 36 590 2.06E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 Gene3D G3DSA:3.40.50.300 1 243 1.7E-76 T 11-10-2018 AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 Pfam PF00271 Helicase conserved C-terminal domain 435 544 4.8E-18 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 SMART SM00487 9 426 2.2E-26 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 43.599 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 Pfam PF04851 Type III restriction enzyme, res subunit 12 138 6.2E-9 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 Gene3D G3DSA:3.40.50.300 269 414 3.0E-51 T 11-10-2018 AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 SMART SM00490 460 546 1.3E-19 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 Pfam PF02151 UvrB/uvrC motif 632 665 6.3E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 Gene3D G3DSA:3.40.50.300 415 589 1.3E-49 T 11-10-2018 AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 SUPERFAMILY SSF52540 3 415 4.02E-139 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 SUPERFAMILY SSF46600 621 666 7.98E-12 T 11-10-2018 IPR036876 UVR domain superfamily AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.8E-19 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AMS64_08620 aa92d5b0da85f9e4149b6eff504d60f7 670 Gene3D G3DSA:4.10.860.10 613 670 1.6E-14 T 11-10-2018 AMS64_10165 9c25bbf10477164a917dce9579b732f4 569 SUPERFAMILY SSF51445 194 527 7.62E-77 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_10165 9c25bbf10477164a917dce9579b732f4 569 Gene3D G3DSA:3.20.20.70 191 498 4.2E-97 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_10165 9c25bbf10477164a917dce9579b732f4 569 Pfam PF02065 Melibiase 234 351 1.2E-13 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 Gene3D G3DSA:1.10.420.10 578 699 5.6E-144 T 11-10-2018 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 39.785 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 1.9E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 1.9E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 1.9E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 1.9E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 1.9E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 Gene3D G3DSA:1.10.520.10 433 723 5.6E-144 T 11-10-2018 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 Gene3D G3DSA:1.10.520.10 28 432 1.6E-216 T 11-10-2018 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 SUPERFAMILY SSF48113 19 431 4.42E-153 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 Pfam PF00141 Peroxidase 70 397 1.9E-51 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 Pfam PF00141 Peroxidase 405 698 2.9E-38 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 3.3E-19 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 3.3E-19 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 3.3E-19 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 3.3E-19 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 3.3E-19 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 Gene3D G3DSA:1.10.420.20 191 397 1.6E-216 T 11-10-2018 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 SUPERFAMILY SSF48113 432 722 1.77E-111 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_02265 0b59bf36ae1d010a7df142a7e17d9461 725 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 724 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_10375 dd12b2a7bdbdd92179b03d8c6a6cb1e5 348 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 1 27 7.5E-6 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMS64_10375 dd12b2a7bdbdd92179b03d8c6a6cb1e5 348 Pfam PF13247 4Fe-4S dicluster domain 107 208 1.6E-23 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_10375 dd12b2a7bdbdd92179b03d8c6a6cb1e5 348 Gene3D G3DSA:3.30.70.20 36 177 3.6E-49 T 11-10-2018 AMS64_10375 dd12b2a7bdbdd92179b03d8c6a6cb1e5 348 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_10375 dd12b2a7bdbdd92179b03d8c6a6cb1e5 348 SUPERFAMILY SSF54862 39 324 8.37E-68 T 11-10-2018 AMS64_10375 dd12b2a7bdbdd92179b03d8c6a6cb1e5 348 Gene3D G3DSA:3.30.70.20 37 227 3.6E-49 T 11-10-2018 AMS64_17850 328646b2407045d9efefd85c4a2825c0 238 SUPERFAMILY SSF46894 162 234 2.75E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_17850 328646b2407045d9efefd85c4a2825c0 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 230 1.8E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_17850 328646b2407045d9efefd85c4a2825c0 238 Gene3D G3DSA:3.30.450.80 10 167 3.7E-8 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AMS64_17850 328646b2407045d9efefd85c4a2825c0 238 SMART SM00421 173 230 7.3E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_17850 328646b2407045d9efefd85c4a2825c0 238 TIGRFAM TIGR03541 reg_near_HchA: LuxR family transcriptional regulatory, chaperone HchA-associated 9 236 2.1E-87 T 11-10-2018 IPR019941 Transcription regulator LuxR, chaperone HchA-associated AMS64_17850 328646b2407045d9efefd85c4a2825c0 238 Gene3D G3DSA:1.10.10.10 175 234 8.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_17850 328646b2407045d9efefd85c4a2825c0 238 SUPERFAMILY SSF75516 14 167 1.7E-12 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AMS64_17850 328646b2407045d9efefd85c4a2825c0 238 Pfam PF03472 Autoinducer binding domain 22 160 1.0E-12 T 11-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMS64_17850 328646b2407045d9efefd85c4a2825c0 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 3.6E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_17850 328646b2407045d9efefd85c4a2825c0 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 3.6E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_17850 328646b2407045d9efefd85c4a2825c0 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 3.6E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_07795 c150b106d6f4bfde6fa92835a085b70d 271 Gene3D G3DSA:1.10.8.520 36 107 1.0E-28 T 11-10-2018 AMS64_07795 c150b106d6f4bfde6fa92835a085b70d 271 Gene3D G3DSA:1.20.1270.190 108 267 2.6E-48 T 11-10-2018 AMS64_07795 c150b106d6f4bfde6fa92835a085b70d 271 Gene3D G3DSA:1.10.287.1060 137 205 2.6E-48 T 11-10-2018 AMS64_07795 c150b106d6f4bfde6fa92835a085b70d 271 Pfam PF16806 Antiactivator protein ExsD 41 266 7.9E-51 T 11-10-2018 IPR031835 Antiactivator protein ExsD AMS64_13760 c150b106d6f4bfde6fa92835a085b70d 271 Gene3D G3DSA:1.10.8.520 36 107 1.0E-28 T 11-10-2018 AMS64_13760 c150b106d6f4bfde6fa92835a085b70d 271 Gene3D G3DSA:1.20.1270.190 108 267 2.6E-48 T 11-10-2018 AMS64_13760 c150b106d6f4bfde6fa92835a085b70d 271 Gene3D G3DSA:1.10.287.1060 137 205 2.6E-48 T 11-10-2018 AMS64_13760 c150b106d6f4bfde6fa92835a085b70d 271 Pfam PF16806 Antiactivator protein ExsD 41 266 7.9E-51 T 11-10-2018 IPR031835 Antiactivator protein ExsD AMS64_01710 817191a5db61e402470e4f5702ed5605 301 Gene3D G3DSA:1.10.3720.10 13 297 6.5E-52 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_01710 817191a5db61e402470e4f5702ed5605 301 SUPERFAMILY SSF161098 13 296 7.2E-55 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_01710 817191a5db61e402470e4f5702ed5605 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 290 3.3E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_11470 cbcbec15338789db9d67f02e0a31b923 338 Pfam PF02016 LD-carboxypeptidase 15 321 2.4E-71 T 11-10-2018 IPR003507 Peptidase family S66 AMS64_11470 cbcbec15338789db9d67f02e0a31b923 338 Gene3D G3DSA:3.50.30.60 169 336 2.4E-51 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily AMS64_11470 cbcbec15338789db9d67f02e0a31b923 338 SUPERFAMILY SSF52317 2 159 1.1E-43 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_11470 cbcbec15338789db9d67f02e0a31b923 338 Gene3D G3DSA:3.40.50.10740 2 162 3.0E-56 T 11-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal AMS64_11470 cbcbec15338789db9d67f02e0a31b923 338 SUPERFAMILY SSF141986 175 327 8.89E-38 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily AMS64_11470 cbcbec15338789db9d67f02e0a31b923 338 PIRSF PIRSF028757 3 336 2.3E-83 T 11-10-2018 IPR003507 Peptidase family S66 AMS64_14550 3fe8fc6164adad4e3b472f04bcc724b5 510 Pfam PF00361 Proton-conducting membrane transporter 137 435 1.6E-70 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14550 3fe8fc6164adad4e3b472f04bcc724b5 510 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 5 498 1.0E-174 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14550 3fe8fc6164adad4e3b472f04bcc724b5 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 341 360 9.8E-38 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14550 3fe8fc6164adad4e3b472f04bcc724b5 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 178 202 9.8E-38 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14550 3fe8fc6164adad4e3b472f04bcc724b5 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 253 277 9.8E-38 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14550 3fe8fc6164adad4e3b472f04bcc724b5 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 393 419 9.8E-38 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14550 3fe8fc6164adad4e3b472f04bcc724b5 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 143 162 9.8E-38 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_03350 fa2d968cc956116237677b18e306e04f 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 885 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMS64_03350 fa2d968cc956116237677b18e306e04f 886 SUPERFAMILY SSF52922 701 885 8.2E-60 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMS64_03350 fa2d968cc956116237677b18e306e04f 886 PIRSF PIRSF000156 1 886 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMS64_03350 fa2d968cc956116237677b18e306e04f 886 Gene3D G3DSA:3.40.50.970 56 470 5.6E-133 T 11-10-2018 AMS64_03350 fa2d968cc956116237677b18e306e04f 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 112 296 1.9E-6 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMS64_03350 fa2d968cc956116237677b18e306e04f 886 SUPERFAMILY SSF52518 473 700 5.53E-99 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_03350 fa2d968cc956116237677b18e306e04f 886 Gene3D G3DSA:3.40.50.970 471 705 1.8E-109 T 11-10-2018 AMS64_03350 fa2d968cc956116237677b18e306e04f 886 SUPERFAMILY SSF52518 58 466 1.37E-140 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_03350 fa2d968cc956116237677b18e306e04f 886 Gene3D G3DSA:3.40.50.920 706 886 3.8E-70 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMS64_14470 17751ccd6d1a192e4d5a384ab2ca8d55 712 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 31 709 8.7E-108 T 11-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 AMS64_14470 17751ccd6d1a192e4d5a384ab2ca8d55 712 Pfam PF00593 TonB dependent receptor 230 708 4.1E-48 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMS64_14470 17751ccd6d1a192e4d5a384ab2ca8d55 712 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 31 709 3.4E-105 T 11-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 AMS64_14470 17751ccd6d1a192e4d5a384ab2ca8d55 712 Gene3D G3DSA:2.40.170.20 171 709 7.9E-84 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMS64_14470 17751ccd6d1a192e4d5a384ab2ca8d55 712 SUPERFAMILY SSF56935 24 709 7.1E-107 T 11-10-2018 AMS64_14470 17751ccd6d1a192e4d5a384ab2ca8d55 712 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 11-10-2018 IPR010916 TonB box, conserved site AMS64_14470 17751ccd6d1a192e4d5a384ab2ca8d55 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 153 3.2E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMS64_14470 17751ccd6d1a192e4d5a384ab2ca8d55 712 Gene3D G3DSA:2.170.130.10 30 158 1.1E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMS64_12725 0027d78f9965d736bfe858b00d6ca11e 379 SUPERFAMILY SSF52540 4 336 1.17E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_12725 0027d78f9965d736bfe858b00d6ca11e 379 Gene3D G3DSA:3.40.50.300 100 356 7.1E-90 T 11-10-2018 AMS64_12725 0027d78f9965d736bfe858b00d6ca11e 379 Pfam PF00437 Type II/IV secretion system protein 115 246 7.8E-37 T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_12725 0027d78f9965d736bfe858b00d6ca11e 379 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 2.3E-132 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AMS64_12725 0027d78f9965d736bfe858b00d6ca11e 379 SMART SM00382 122 247 0.0054 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_12725 0027d78f9965d736bfe858b00d6ca11e 379 Gene3D G3DSA:3.30.450.90 1 99 2.7E-29 T 11-10-2018 AMS64_12725 0027d78f9965d736bfe858b00d6ca11e 379 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 4.7E-110 T 11-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 Gene3D G3DSA:3.40.50.720 1 245 1.5E-76 T 11-10-2018 AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 243 4.4E-57 T 11-10-2018 AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 4.4E-5 T 11-10-2018 AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.5E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.5E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.5E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 SUPERFAMILY SSF51735 2 245 8.54E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.6E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.6E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.6E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.6E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.6E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_08075 13ed9d4006b80a2c116e058c17dfac0a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.6E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_05235 afc181b27ea3a1bc09cfc5456a8fdf8c 489 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 322 470 1.2E-27 T 11-10-2018 IPR000160 GGDEF domain AMS64_05235 afc181b27ea3a1bc09cfc5456a8fdf8c 489 SUPERFAMILY SSF55073 329 473 4.71E-32 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_05235 afc181b27ea3a1bc09cfc5456a8fdf8c 489 SMART SM00267 313 472 2.2E-37 T 11-10-2018 IPR000160 GGDEF domain AMS64_05235 afc181b27ea3a1bc09cfc5456a8fdf8c 489 Gene3D G3DSA:3.30.70.270 317 471 1.2E-33 T 11-10-2018 AMS64_05235 afc181b27ea3a1bc09cfc5456a8fdf8c 489 Pfam PF00990 Diguanylate cyclase, GGDEF domain 324 467 8.1E-30 T 11-10-2018 IPR000160 GGDEF domain AMS64_11295 f065bd6195e93c2ee316d06b2bdc7f6a 171 Gene3D G3DSA:2.60.40.4150 35 170 9.7E-35 T 11-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily AMS64_11295 f065bd6195e93c2ee316d06b2bdc7f6a 171 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 12 160 3.9E-39 T 11-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN AMS64_11295 f065bd6195e93c2ee316d06b2bdc7f6a 171 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 5 163 3.2E-45 T 11-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN AMS64_04500 c7c3dc2c3252d228822890215108db15 441 Pfam PF04052 TolB amino-terminal domain 23 125 3.2E-36 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMS64_04500 c7c3dc2c3252d228822890215108db15 441 Gene3D G3DSA:2.120.10.30 175 441 3.6E-93 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMS64_04500 c7c3dc2c3252d228822890215108db15 441 Pfam PF07676 WD40-like Beta Propeller Repeat 248 282 1.3E-8 T 11-10-2018 IPR011659 WD40-like Beta Propeller AMS64_04500 c7c3dc2c3252d228822890215108db15 441 Pfam PF07676 WD40-like Beta Propeller Repeat 290 325 3.4E-11 T 11-10-2018 IPR011659 WD40-like Beta Propeller AMS64_04500 c7c3dc2c3252d228822890215108db15 441 Pfam PF07676 WD40-like Beta Propeller Repeat 211 238 1.2E-7 T 11-10-2018 IPR011659 WD40-like Beta Propeller AMS64_04500 c7c3dc2c3252d228822890215108db15 441 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 436 50.041 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AMS64_04500 c7c3dc2c3252d228822890215108db15 441 SUPERFAMILY SSF52964 28 171 1.57E-43 T 11-10-2018 AMS64_04500 c7c3dc2c3252d228822890215108db15 441 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 437 2.2E-163 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AMS64_04500 c7c3dc2c3252d228822890215108db15 441 Gene3D G3DSA:3.40.50.10070 19 174 8.5E-50 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 AMS64_04500 c7c3dc2c3252d228822890215108db15 441 SUPERFAMILY SSF69304 166 438 3.66E-56 T 11-10-2018 AMS64_08315 c0ebe89adafbe15f58f5e020d89d8d12 479 SUPERFAMILY SSF53383 72 467 6.83E-105 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_08315 c0ebe89adafbe15f58f5e020d89d8d12 479 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 281 318 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_08315 c0ebe89adafbe15f58f5e020d89d8d12 479 PIRSF PIRSF000521 48 175 3.3E-4 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_08315 c0ebe89adafbe15f58f5e020d89d8d12 479 PIRSF PIRSF000521 169 200 50.0 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_08315 c0ebe89adafbe15f58f5e020d89d8d12 479 PIRSF PIRSF000521 222 468 8.4E-20 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_08315 c0ebe89adafbe15f58f5e020d89d8d12 479 Gene3D G3DSA:3.40.640.10 105 364 2.5E-117 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_08315 c0ebe89adafbe15f58f5e020d89d8d12 479 Pfam PF00202 Aminotransferase class-III 73 465 2.5E-78 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_08315 c0ebe89adafbe15f58f5e020d89d8d12 479 Gene3D G3DSA:3.90.1150.10 77 460 2.5E-117 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_01405 017f07ad3abcff8a8b095139394b1099 353 Pfam PF13439 Glycosyltransferase Family 4 18 176 7.0E-9 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMS64_01405 017f07ad3abcff8a8b095139394b1099 353 Gene3D G3DSA:3.40.50.2000 9 183 1.2E-12 T 11-10-2018 AMS64_01405 017f07ad3abcff8a8b095139394b1099 353 Gene3D G3DSA:3.40.50.2000 189 344 7.2E-31 T 11-10-2018 AMS64_01405 017f07ad3abcff8a8b095139394b1099 353 SUPERFAMILY SSF53756 8 351 1.99E-49 T 11-10-2018 AMS64_01405 017f07ad3abcff8a8b095139394b1099 353 Pfam PF00534 Glycosyl transferases group 1 191 323 2.9E-23 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMS64_05675 772a06ce531b059d4315095e82b4b914 212 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 168 184 1.7E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMS64_05675 772a06ce531b059d4315095e82b4b914 212 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 184 199 1.7E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMS64_05675 772a06ce531b059d4315095e82b4b914 212 ProSitePatterns PS00042 Crp-type HTH domain signature. 170 193 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AMS64_05675 772a06ce531b059d4315095e82b4b914 212 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 91 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site AMS64_05675 772a06ce531b059d4315095e82b4b914 212 Gene3D G3DSA:1.10.10.10 141 209 1.9E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_05675 772a06ce531b059d4315095e82b4b914 212 SMART SM00100 2 124 1.6E-24 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_05675 772a06ce531b059d4315095e82b4b914 212 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site AMS64_05675 772a06ce531b059d4315095e82b4b914 212 Pfam PF00325 Bacterial regulatory proteins, crp family 168 199 5.4E-15 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMS64_05675 772a06ce531b059d4315095e82b4b914 212 SUPERFAMILY SSF46785 141 209 1.69E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_05675 772a06ce531b059d4315095e82b4b914 212 Gene3D G3DSA:2.60.120.10 10 140 3.0E-42 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_05675 772a06ce531b059d4315095e82b4b914 212 Pfam PF00027 Cyclic nucleotide-binding domain 23 111 3.3E-22 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_05675 772a06ce531b059d4315095e82b4b914 212 SMART SM00419 162 210 7.1E-16 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMS64_05675 772a06ce531b059d4315095e82b4b914 212 SUPERFAMILY SSF51206 8 139 7.2E-33 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 558 628 3.3E-23 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR00418 DNA topoisomerase II family signature 31 46 4.9E-58 T 11-10-2018 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR00418 DNA topoisomerase II family signature 414 428 4.9E-58 T 11-10-2018 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR00418 DNA topoisomerase II family signature 479 495 4.9E-58 T 11-10-2018 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR00418 DNA topoisomerase II family signature 517 529 4.9E-58 T 11-10-2018 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR00418 DNA topoisomerase II family signature 66 79 4.9E-58 T 11-10-2018 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR00418 DNA topoisomerase II family signature 497 514 4.9E-58 T 11-10-2018 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR00418 DNA topoisomerase II family signature 109 123 4.9E-58 T 11-10-2018 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR00418 DNA topoisomerase II family signature 266 279 4.9E-58 T 11-10-2018 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR00418 DNA topoisomerase II family signature 562 578 4.9E-58 T 11-10-2018 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 4.6E-123 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 SMART SM00433 34 632 1.6E-201 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 Gene3D G3DSA:3.30.230.10 216 389 7.6E-56 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 SUPERFAMILY SSF55874 4 215 2.44E-66 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 SMART SM00387 27 173 3.1E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 SUPERFAMILY SSF54211 217 382 1.57E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 636 46.604 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 Pfam PF01751 Toprim domain 413 522 2.7E-12 T 11-10-2018 IPR006171 TOPRIM domain AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 632 0.0 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 Pfam PF00204 DNA gyrase B 218 384 4.2E-41 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 2.2E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 SUPERFAMILY SSF56719 388 629 3.4E-75 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 Gene3D G3DSA:3.40.50.670 390 631 8.4E-88 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_04010 7347ff2b52ceb0179c42cbfef4823f09 636 Gene3D G3DSA:3.30.565.10 2 215 1.1E-73 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_20920 6da2152592eadef31930a728e5632eb0 557 SUPERFAMILY SSF55073 371 526 5.65E-36 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_20920 6da2152592eadef31930a728e5632eb0 557 Pfam PF05228 CHASE4 domain 57 213 5.7E-25 T 11-10-2018 IPR007892 CHASE4 AMS64_20920 6da2152592eadef31930a728e5632eb0 557 SMART SM00267 355 526 1.9E-40 T 11-10-2018 IPR000160 GGDEF domain AMS64_20920 6da2152592eadef31930a728e5632eb0 557 Gene3D G3DSA:3.30.70.270 352 527 9.2E-43 T 11-10-2018 AMS64_20920 6da2152592eadef31930a728e5632eb0 557 Pfam PF00990 Diguanylate cyclase, GGDEF domain 366 522 1.2E-30 T 11-10-2018 IPR000160 GGDEF domain AMS64_20920 6da2152592eadef31930a728e5632eb0 557 SMART SM00304 300 353 0.0087 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_20920 6da2152592eadef31930a728e5632eb0 557 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 363 523 2.9E-32 T 11-10-2018 IPR000160 GGDEF domain AMS64_01205 e4b8812949d00e47c71cb601b9948e6b 421 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 211 1.6E-61 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AMS64_01205 e4b8812949d00e47c71cb601b9948e6b 421 Gene3D G3DSA:3.40.50.2000 215 401 1.5E-64 T 11-10-2018 AMS64_01205 e4b8812949d00e47c71cb601b9948e6b 421 SUPERFAMILY SSF53756 59 415 1.05E-20 T 11-10-2018 AMS64_01205 e4b8812949d00e47c71cb601b9948e6b 421 Pfam PF00534 Glycosyl transferases group 1 293 398 3.3E-7 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMS64_01205 e4b8812949d00e47c71cb601b9948e6b 421 Gene3D G3DSA:3.40.50.11720 38 209 1.7E-45 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 Gene3D G3DSA:3.30.499.20 4 286 3.9E-98 T 11-10-2018 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 465 59.928 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 SUPERFAMILY SSF53732 2 464 2.35E-166 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 8.1E-257 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 Gene3D G3DSA:3.30.499.10 324 465 2.8E-51 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 4.3E-160 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 PRINTS PR00415 Aconitase family signature 133 148 1.4E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 PRINTS PR00415 Aconitase family signature 399 412 1.4E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 PRINTS PR00415 Aconitase family signature 108 116 1.4E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 PRINTS PR00415 Aconitase family signature 119 132 1.4E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 PRINTS PR00415 Aconitase family signature 209 222 1.4E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 PRINTS PR00415 Aconitase family signature 286 300 1.4E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 PRINTS PR00415 Aconitase family signature 82 95 1.4E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 PRINTS PR00415 Aconitase family signature 195 208 1.4E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMS64_19695 1bd4d2454dd8aa4e2bdc11d6726e6dcd 465 PRINTS PR00415 Aconitase family signature 343 354 1.4E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 SUPERFAMILY SSF53323 423 673 5.75E-70 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1180 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 SUPERFAMILY SSF54862 670 847 1.15E-21 T 11-10-2018 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 SUPERFAMILY SSF52518 803 1183 5.61E-129 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 SUPERFAMILY SSF52922 260 419 1.88E-38 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 SMART SM00890 628 684 5.9E-22 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 Gene3D G3DSA:3.40.50.920 259 416 4.0E-52 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 969 1081 1.6E-10 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 Gene3D G3DSA:3.30.70.20 674 799 7.5E-32 T 11-10-2018 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 Pfam PF12838 4Fe-4S dicluster domain 694 764 3.9E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 Gene3D G3DSA:3.40.50.970 3 258 6.9E-107 T 11-10-2018 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 PIRSF PIRSF000159 1 1188 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 SUPERFAMILY SSF52518 4 258 1.04E-77 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 750 761 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 Gene3D G3DSA:3.40.50.970 802 1183 4.9E-152 T 11-10-2018 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 271 351 9.0E-13 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 Gene3D G3DSA:3.40.920.10 422 629 3.3E-72 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 Pfam PF10371 Domain of unknown function 640 683 3.1E-17 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 431 612 8.1E-26 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AMS64_16210 530dcb01ce92a0688fe722d7bcb30a5f 1191 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 247 3.4E-85 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 SMART SM00982 1013 1113 1.2E-46 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 SUPERFAMILY SSF141259 477 548 5.36E-22 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 150 1086 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 SUPERFAMILY SSF143517 999 1152 3.66E-42 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 Gene3D G3DSA:3.30.2060.10 133 218 1.4E-118 T 11-10-2018 AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 Gene3D G3DSA:2.30.30.840 490 546 4.5E-233 T 11-10-2018 AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 Pfam PF00270 DEAD/DEAH box helicase 610 770 1.5E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 Gene3D G3DSA:3.40.50.300 486 995 4.5E-233 T 11-10-2018 AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 SMART SM00490 831 915 3.2E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 SMART SM01058 486 581 9.3E-48 T 11-10-2018 IPR003711 CarD-like/TRCF domain AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 Gene3D G3DSA:3.90.1150.50 1009 1155 4.1E-42 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 SUPERFAMILY SSF52540 531 788 9.4E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 SMART SM00487 605 795 4.2E-33 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 SUPERFAMILY SSF52540 7 343 3.4E-100 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 Pfam PF00271 Helicase conserved C-terminal domain 811 914 8.4E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 Gene3D G3DSA:3.40.50.11180 21 336 1.4E-118 T 11-10-2018 AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 SUPERFAMILY SSF52540 787 995 6.1E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 SUPERFAMILY SSF52540 354 472 3.13E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 Gene3D G3DSA:3.40.50.300 547 786 4.5E-233 T 11-10-2018 AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 Pfam PF02559 CarD-like/TRCF domain 487 580 1.9E-23 T 11-10-2018 IPR003711 CarD-like/TRCF domain AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1113 28.245 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 Pfam PF03461 TRCF domain 1014 1106 6.0E-27 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMS64_10890 4a3a93454e1e22a5a3d787152cc955ac 1155 Gene3D G3DSA:3.40.50.11140 359 459 2.9E-22 T 11-10-2018 AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 Pfam PF00009 Elongation factor Tu GTP binding domain 401 557 4.1E-35 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 401 554 4.1E-31 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 1.6E-12 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 Gene3D G3DSA:3.30.56.50 2 51 2.2E-19 T 11-10-2018 AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 SUPERFAMILY SSF52156 675 804 6.54E-37 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 Gene3D G3DSA:3.40.50.300 394 568 5.5E-72 T 11-10-2018 AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 Gene3D G3DSA:3.40.50.10050 691 798 8.9E-36 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 SUPERFAMILY SSF46955 3 51 6.96E-12 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 Gene3D G3DSA:2.40.30.10 799 896 1.2E-34 T 11-10-2018 AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 ProSitePatterns PS01176 Initiation factor 2 signature. 848 870 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 SUPERFAMILY SSF52540 394 563 6.58E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 SUPERFAMILY SSF50447 570 652 1.13E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 895 17.635 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 Pfam PF11987 Translation-initiation factor 2 682 787 6.5E-36 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 Gene3D G3DSA:2.40.30.10 569 687 1.1E-39 T 11-10-2018 AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 322 372 1.7E-14 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 314 897 1.1E-286 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AMS64_18770 d9ea779ade3c7fb59b13cc46aad591a4 897 SUPERFAMILY SSF50447 798 895 1.37E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMS64_13655 cadcdfcb982f0ff566b5203c91892202 403 SUPERFAMILY SSF141868 146 390 4.71E-83 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_13655 cadcdfcb982f0ff566b5203c91892202 403 Gene3D G3DSA:3.20.20.450 144 392 1.7E-85 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_13655 cadcdfcb982f0ff566b5203c91892202 403 SUPERFAMILY SSF52172 8 131 8.68E-24 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_13655 cadcdfcb982f0ff566b5203c91892202 403 Pfam PF00072 Response regulator receiver domain 10 125 1.0E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_13655 cadcdfcb982f0ff566b5203c91892202 403 Pfam PF00563 EAL domain 146 380 1.5E-67 T 11-10-2018 IPR001633 EAL domain AMS64_13655 cadcdfcb982f0ff566b5203c91892202 403 Gene3D G3DSA:3.40.50.2300 6 134 6.4E-24 T 11-10-2018 AMS64_13655 cadcdfcb982f0ff566b5203c91892202 403 SMART SM00052 140 385 6.4E-90 T 11-10-2018 IPR001633 EAL domain AMS64_13655 cadcdfcb982f0ff566b5203c91892202 403 SMART SM00448 8 125 7.1E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_12430 4aae8064cf2a744f5e683e94c25c5b69 658 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 454 621 1.3E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_12430 4aae8064cf2a744f5e683e94c25c5b69 658 Gene3D G3DSA:1.10.287.950 326 658 1.9E-60 T 11-10-2018 AMS64_12430 4aae8064cf2a744f5e683e94c25c5b69 658 SUPERFAMILY SSF58104 348 657 6.02E-60 T 11-10-2018 AMS64_12430 4aae8064cf2a744f5e683e94c25c5b69 658 Pfam PF02743 Cache domain 56 284 1.0E-16 T 11-10-2018 IPR033479 Double Cache domain 1 AMS64_12430 4aae8064cf2a744f5e683e94c25c5b69 658 SMART SM00283 395 656 9.2E-46 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_12430 4aae8064cf2a744f5e683e94c25c5b69 658 SMART SM00304 327 380 4.7E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_12430 4aae8064cf2a744f5e683e94c25c5b69 658 Pfam PF00672 HAMP domain 327 376 8.8E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_12430 4aae8064cf2a744f5e683e94c25c5b69 658 Gene3D G3DSA:3.30.450.20 177 305 5.1E-14 T 11-10-2018 AMS64_05990 f290261a0059369d03e968a03158a2c5 231 Gene3D G3DSA:3.40.50.300 4 231 2.5E-69 T 11-10-2018 AMS64_05990 f290261a0059369d03e968a03158a2c5 231 Pfam PF00005 ABC transporter 26 172 2.7E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_05990 f290261a0059369d03e968a03158a2c5 231 SUPERFAMILY SSF52540 6 224 3.03E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_05990 f290261a0059369d03e968a03158a2c5 231 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_05990 f290261a0059369d03e968a03158a2c5 231 SMART SM00382 35 221 4.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 Gene3D G3DSA:3.30.110.120 272 401 1.1E-138 T 11-10-2018 AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 Pfam PF00708 Acylphosphatase 21 99 1.8E-19 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 Gene3D G3DSA:3.90.870.50 22 392 1.1E-138 T 11-10-2018 AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 SUPERFAMILY SSF55821 193 419 2.01E-45 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 SUPERFAMILY SSF54975 16 102 1.64E-21 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 Pfam PF07503 HypF finger 176 208 8.5E-16 T 11-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 Pfam PF07503 HypF finger 126 159 9.0E-16 T 11-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 ProSitePatterns PS00150 Acylphosphatase signature 1. 24 34 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 Gene3D G3DSA:3.30.420.350 517 774 3.2E-117 T 11-10-2018 AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 Pfam PF01300 Telomere recombination 229 413 2.4E-52 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 PIRSF PIRSF006256 15 797 5.0E-269 T 11-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 23 787 5.0E-221 T 11-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 AMS64_10295 ccc7d8845609e92dfad1f10119d94ba1 808 Gene3D G3DSA:3.30.420.360 414 786 3.2E-117 T 11-10-2018 AMS64_21610 3e182679225dfed0c457fe8ddd4b66b1 81 Pfam PF10678 Protein of unknown function (DUF2492) 3 79 9.9E-35 T 11-10-2018 IPR019620 Putative metal-binding protein AMS64_21610 3e182679225dfed0c457fe8ddd4b66b1 81 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 80 8.3E-35 T 11-10-2018 IPR019620 Putative metal-binding protein AMS64_21820 a7f772889e546de4af915594d2fd6e93 276 Pfam PF12852 Cupin 2 156 2.2E-26 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AMS64_21820 a7f772889e546de4af915594d2fd6e93 276 SUPERFAMILY SSF46689 170 221 3.69E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_21820 a7f772889e546de4af915594d2fd6e93 276 SUPERFAMILY SSF46689 223 271 5.82E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_21820 a7f772889e546de4af915594d2fd6e93 276 SMART SM00342 187 269 3.5E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_21820 a7f772889e546de4af915594d2fd6e93 276 SUPERFAMILY SSF51215 32 153 1.7E-6 T 11-10-2018 IPR037923 Transcription regulator HTH-like AMS64_21820 a7f772889e546de4af915594d2fd6e93 276 Gene3D G3DSA:1.10.10.60 167 275 7.4E-24 T 11-10-2018 AMS64_21820 a7f772889e546de4af915594d2fd6e93 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 265 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_21820 a7f772889e546de4af915594d2fd6e93 276 Pfam PF12833 Helix-turn-helix domain 193 270 4.6E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_14360 b2a6f5bf5a9aa552b832bd1c122c7e74 143 SUPERFAMILY SSF55785 8 125 1.79E-9 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_14360 b2a6f5bf5a9aa552b832bd1c122c7e74 143 Pfam PF08448 PAS fold 14 133 7.0E-6 T 11-10-2018 IPR013656 PAS fold-4 AMS64_14360 b2a6f5bf5a9aa552b832bd1c122c7e74 143 Gene3D G3DSA:3.30.450.20 3 135 1.8E-30 T 11-10-2018 AMS64_14360 b2a6f5bf5a9aa552b832bd1c122c7e74 143 SMART SM00091 7 73 0.0022 T 11-10-2018 IPR000014 PAS domain AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 5.9E-11 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 5.9E-11 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 5.9E-11 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 Gene3D G3DSA:3.40.50.300 197 368 6.7E-39 T 11-10-2018 AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 PIRSF PIRSF006809 3 421 1.5E-149 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 SUPERFAMILY SSF54980 365 422 3.6E-12 T 11-10-2018 IPR035647 EF-G domain III/V-like AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 Gene3D G3DSA:3.40.50.11060 18 138 1.2E-37 T 11-10-2018 AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 Pfam PF01926 50S ribosome-binding GTPase 200 318 3.4E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.758 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 SUPERFAMILY SSF52540 198 377 1.12E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 8.3E-29 T 11-10-2018 IPR032305 GTP-binding protein, middle domain AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 9.4E-31 T 11-10-2018 IPR025121 GTPase HflX, N-terminal AMS64_19410 2b6c0aea46b556926c0815718fc17c61 428 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 360 2.1E-155 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 PRINTS PR00301 70kDa heat shock protein signature 198 208 1.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 PRINTS PR00301 70kDa heat shock protein signature 334 350 1.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 PRINTS PR00301 70kDa heat shock protein signature 365 385 1.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 SUPERFAMILY SSF53067 4 182 5.4E-65 T 11-10-2018 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 Gene3D G3DSA:3.30.420.40 180 366 8.9E-166 T 11-10-2018 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 SUPERFAMILY SSF100920 385 540 6.15E-62 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 Gene3D G3DSA:2.60.34.10 383 523 7.7E-68 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 Pfam PF00012 Hsp70 protein 4 602 9.4E-262 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 Gene3D G3DSA:3.90.640.10 229 316 8.9E-166 T 11-10-2018 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 639 36.702 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.1E-290 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 Gene3D G3DSA:1.20.1270.10 524 603 2.6E-27 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 SUPERFAMILY SSF53067 187 382 3.24E-66 T 11-10-2018 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 Gene3D G3DSA:3.30.420.40 5 379 8.9E-166 T 11-10-2018 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMS64_16500 b352c601890bcecb4a6ea309b224205c 644 SUPERFAMILY SSF100934 534 607 4.32E-6 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AMS64_07895 d902a1e8f8e2730158ecb0c37369a5aa 149 Gene3D G3DSA:3.30.420.10 3 129 5.2E-16 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_07895 d902a1e8f8e2730158ecb0c37369a5aa 149 Pfam PF00665 Integrase core domain 8 104 3.2E-21 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_07895 d902a1e8f8e2730158ecb0c37369a5aa 149 SUPERFAMILY SSF53098 2 144 3.79E-32 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 1.8E-151 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 PRINTS PR00143 Citrate synthase signature 251 271 1.3E-39 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 PRINTS PR00143 Citrate synthase signature 328 342 1.3E-39 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 PRINTS PR00143 Citrate synthase signature 176 191 1.3E-39 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 PRINTS PR00143 Citrate synthase signature 126 139 1.3E-39 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 PRINTS PR00143 Citrate synthase signature 198 226 1.3E-39 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 PRINTS PR00143 Citrate synthase signature 308 324 1.3E-39 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 4.0E-117 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 Gene3D G3DSA:1.10.580.10 32 355 1.5E-121 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 SUPERFAMILY SSF48256 10 375 3.27E-126 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 Gene3D G3DSA:1.10.230.10 224 322 1.5E-121 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AMS64_09710 235ff7a99bbb2df5aba517ff59adf320 375 PIRSF PIRSF001369 7 375 1.1E-117 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type AMS64_08085 e7bf012dcf2191139ea583e53ab67e88 714 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 714 1.7E-115 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AMS64_08085 e7bf012dcf2191139ea583e53ab67e88 714 Pfam PF00593 TonB dependent receptor 231 712 1.2E-55 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMS64_08085 e7bf012dcf2191139ea583e53ab67e88 714 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 45 - T 11-10-2018 IPR010916 TonB box, conserved site AMS64_08085 e7bf012dcf2191139ea583e53ab67e88 714 Gene3D G3DSA:2.170.130.10 38 171 1.3E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMS64_08085 e7bf012dcf2191139ea583e53ab67e88 714 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 160 5.9E-19 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMS64_08085 e7bf012dcf2191139ea583e53ab67e88 714 Gene3D G3DSA:2.40.170.20 172 714 1.6E-131 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMS64_08085 e7bf012dcf2191139ea583e53ab67e88 714 SUPERFAMILY SSF56935 26 714 3.36E-129 T 11-10-2018 AMS64_09205 806c51b1b0164a22ea4d909fdd6ce835 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 3.3E-63 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AMS64_09205 806c51b1b0164a22ea4d909fdd6ce835 193 Pfam PF00692 dUTPase 78 184 3.9E-7 T 11-10-2018 IPR029054 dUTPase-like AMS64_09205 806c51b1b0164a22ea4d909fdd6ce835 193 SUPERFAMILY SSF51283 1 193 4.45E-58 T 11-10-2018 IPR036157 dUTPase-like superfamily AMS64_09205 806c51b1b0164a22ea4d909fdd6ce835 193 Gene3D G3DSA:2.70.40.10 1 162 7.0E-49 T 11-10-2018 IPR036157 dUTPase-like superfamily AMS64_09205 806c51b1b0164a22ea4d909fdd6ce835 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 32.544 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 SUPERFAMILY SSF56784 496 787 6.51E-55 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 PRINTS PR00941 Cadmium-transporting ATPase signature 90 111 1.9E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 PRINTS PR00941 Cadmium-transporting ATPase signature 79 88 1.9E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 PRINTS PR00941 Cadmium-transporting ATPase signature 363 379 1.9E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 PRINTS PR00941 Cadmium-transporting ATPase signature 382 396 1.9E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 270 766 1.2E-82 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 Pfam PF00702 haloacid dehalogenase-like hydrolase 493 701 5.9E-35 T 11-10-2018 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 SUPERFAMILY SSF81653 300 397 1.96E-25 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 ProSitePatterns PS01047 Heavy-metal-associated domain. 81 110 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 ProSitePatterns PS01047 Heavy-metal-associated domain. 15 43 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 710 722 1.0E-25 T 11-10-2018 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 687 706 1.0E-25 T 11-10-2018 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 643 1.0E-25 T 11-10-2018 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 347 361 1.0E-25 T 11-10-2018 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 497 511 1.0E-25 T 11-10-2018 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 611 622 1.0E-25 T 11-10-2018 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 SUPERFAMILY SSF81665 264 486 4.97E-14 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 499 505 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 232 789 2.3E-179 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 Pfam PF00403 Heavy-metal-associated domain 79 138 2.3E-10 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 Pfam PF00403 Heavy-metal-associated domain 15 71 1.5E-7 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 Gene3D G3DSA:3.30.70.100 76 151 2.7E-17 T 11-10-2018 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 253 789 3.7E-121 T 11-10-2018 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 Gene3D G3DSA:3.40.50.1000 478 739 9.4E-79 T 11-10-2018 IPR023214 HAD superfamily AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 Gene3D G3DSA:3.40.1110.10 508 618 9.4E-79 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 214 790 1.2E-171 T 11-10-2018 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 Gene3D G3DSA:2.70.150.20 290 402 3.5E-36 T 11-10-2018 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 SUPERFAMILY SSF55008 74 143 1.57E-16 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 Gene3D G3DSA:3.30.70.100 11 75 1.6E-10 T 11-10-2018 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 SUPERFAMILY SSF55008 6 71 5.5E-11 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AMS64_00015 f3f5d4c571603d37852191aedd3e7746 809 Pfam PF00122 E1-E2 ATPase 298 477 8.8E-55 T 11-10-2018 AMS64_12360 f824c26066abcb27747bfa6c46ef9689 733 Gene3D G3DSA:3.60.15.10 476 703 4.1E-40 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_12360 f824c26066abcb27747bfa6c46ef9689 733 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 223 384 5.6E-28 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AMS64_12360 f824c26066abcb27747bfa6c46ef9689 733 SMART SM00849 485 668 0.0024 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_12360 f824c26066abcb27747bfa6c46ef9689 733 Pfam PF00753 Metallo-beta-lactamase superfamily 482 550 4.2E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_12360 f824c26066abcb27747bfa6c46ef9689 733 Pfam PF13567 Domain of unknown function (DUF4131) 19 168 3.5E-8 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 AMS64_12360 f824c26066abcb27747bfa6c46ef9689 733 Pfam PF03772 Competence protein 201 452 4.0E-61 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AMS64_12360 f824c26066abcb27747bfa6c46ef9689 733 SUPERFAMILY SSF56281 474 690 7.31E-34 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_12360 f824c26066abcb27747bfa6c46ef9689 733 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 122 690 7.4E-109 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AMS64_09815 ce8f7a5bf936e6786f035a8a5c41b061 311 Gene3D G3DSA:3.40.366.10 7 286 4.0E-103 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AMS64_09815 ce8f7a5bf936e6786f035a8a5c41b061 311 Pfam PF00698 Acyl transferase domain 8 283 6.9E-37 T 11-10-2018 IPR014043 Acyl transferase AMS64_09815 ce8f7a5bf936e6786f035a8a5c41b061 311 SUPERFAMILY SSF52151 4 308 8.11E-80 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMS64_09815 ce8f7a5bf936e6786f035a8a5c41b061 311 Gene3D G3DSA:3.30.70.250 125 197 4.0E-103 T 11-10-2018 AMS64_09815 ce8f7a5bf936e6786f035a8a5c41b061 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 297 7.1E-41 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AMS64_09815 ce8f7a5bf936e6786f035a8a5c41b061 311 SUPERFAMILY SSF55048 128 197 6.8E-17 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMS64_09815 ce8f7a5bf936e6786f035a8a5c41b061 311 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 290 6.0E-122 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AMS64_09815 ce8f7a5bf936e6786f035a8a5c41b061 311 PIRSF PIRSF000446 1 311 1.8E-129 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 210 6.7E-42 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 54.729 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 SUPERFAMILY SSF48179 496 603 2.04E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 SUPERFAMILY SSF51735 316 496 9.57E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 Gene3D G3DSA:1.10.1040.50 498 710 5.7E-76 T 11-10-2018 AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 Gene3D G3DSA:3.90.226.10 1 312 1.4E-95 T 11-10-2018 AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 2.8E-7 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 1.1E-24 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 SUPERFAMILY SSF52096 2 304 3.5E-69 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 Gene3D G3DSA:3.40.50.720 315 497 2.2E-65 T 11-10-2018 AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 3.3E-59 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 SUPERFAMILY SSF48179 626 715 8.42E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_00935 35203c6b550189d85e8d51ce91051e9a 715 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 SUPERFAMILY SSF52540 9 226 3.49E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 SUPERFAMILY SSF50465 298 393 1.09E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 Gene3D G3DSA:2.40.30.10 338 393 1.5E-28 T 11-10-2018 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 Gene3D G3DSA:3.40.50.300 1 203 1.2E-69 T 11-10-2018 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.1E-233 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.2E-57 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.5E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 SUPERFAMILY SSF50447 205 301 1.96E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 Gene3D G3DSA:2.40.30.10 206 334 1.1E-52 T 11-10-2018 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.8E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.5E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMS64_21690 3127eaac72ce2817cbff45906e3c2571 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.202 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMS64_18865 ec53c6fafd8d6524c7e515f440476313 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 310 1.6E-31 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_18865 ec53c6fafd8d6524c7e515f440476313 313 Gene3D G3DSA:1.10.3720.10 87 307 3.5E-27 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_18865 ec53c6fafd8d6524c7e515f440476313 313 SUPERFAMILY SSF161098 92 296 5.76E-27 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_18865 ec53c6fafd8d6524c7e515f440476313 313 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 19 70 6.2E-11 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMS64_01235 993501c6333c9a846f9f88945deac5ee 807 SMART SM00563 304 431 4.4E-26 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMS64_01235 993501c6333c9a846f9f88945deac5ee 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 805 29.17 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AMS64_01235 993501c6333c9a846f9f88945deac5ee 807 PIRSF PIRSF500064 4 806 7.7E-296 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AMS64_01235 993501c6333c9a846f9f88945deac5ee 807 Pfam PF01553 Acyltransferase 288 427 1.3E-23 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMS64_01235 993501c6333c9a846f9f88945deac5ee 807 PIRSF PIRSF000437 19 806 6.1E-284 T 11-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AMS64_01235 993501c6333c9a846f9f88945deac5ee 807 SUPERFAMILY SSF69593 241 518 5.36E-27 T 11-10-2018 AMS64_01235 993501c6333c9a846f9f88945deac5ee 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 801 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AMS64_03390 e0afc8e890d97687e60801e889fcc0b5 464 SUPERFAMILY SSF56176 19 197 1.7E-30 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMS64_03390 e0afc8e890d97687e60801e889fcc0b5 464 Pfam PF01565 FAD binding domain 34 168 1.9E-21 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMS64_03390 e0afc8e890d97687e60801e889fcc0b5 464 Gene3D G3DSA:3.30.465.10 89 211 6.4E-26 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMS64_03390 e0afc8e890d97687e60801e889fcc0b5 464 Gene3D G3DSA:1.10.45.10 429 463 1.6E-5 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMS64_03390 e0afc8e890d97687e60801e889fcc0b5 464 Gene3D G3DSA:3.30.43.10 14 87 7.6E-9 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMS64_03390 e0afc8e890d97687e60801e889fcc0b5 464 Pfam PF04030 D-arabinono-1,4-lactone oxidase 191 458 3.9E-41 T 11-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 AMS64_03390 e0afc8e890d97687e60801e889fcc0b5 464 Gene3D G3DSA:3.30.70.2520 325 424 2.7E-9 T 11-10-2018 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 Pfam PF00873 AcrB/AcrD/AcrF family 4 1004 2.9E-271 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 Gene3D G3DSA:1.20.1640.10 501 1001 6.4E-285 T 11-10-2018 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 SUPERFAMILY SSF82693 40 130 2.44E-22 T 11-10-2018 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 Gene3D G3DSA:3.30.70.1430 40 794 6.4E-285 T 11-10-2018 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 SUPERFAMILY SSF82714 183 263 5.75E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 9.3E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 9.3E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 9.3E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.3E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 9.3E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 9.3E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.3E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 9.3E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 9.3E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 Gene3D G3DSA:3.30.70.1440 648 843 6.4E-285 T 11-10-2018 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 Gene3D G3DSA:3.30.70.1320 134 325 6.4E-285 T 11-10-2018 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 SUPERFAMILY SSF82866 783 1005 2.22E-45 T 11-10-2018 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 Gene3D G3DSA:3.30.2090.10 698 786 6.4E-285 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 SUPERFAMILY SSF82714 701 783 4.19E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 Gene3D G3DSA:1.20.1640.10 10 500 6.4E-285 T 11-10-2018 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 SUPERFAMILY SSF82693 136 323 5.36E-21 T 11-10-2018 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 Gene3D G3DSA:3.30.70.1430 555 647 6.4E-285 T 11-10-2018 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 SUPERFAMILY SSF82693 553 650 4.03E-17 T 11-10-2018 AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 Gene3D G3DSA:3.30.2090.10 178 268 6.4E-285 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_00325 e9bd48ddde2ce6b5fb1d24807ca15b3b 1026 SUPERFAMILY SSF82866 290 489 5.89E-46 T 11-10-2018 AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 SUPERFAMILY SSF141868 563 811 3.79E-84 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 Gene3D G3DSA:3.20.20.450 562 810 3.5E-97 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 SMART SM00091 21 89 15.0 T 11-10-2018 IPR000014 PAS domain AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 SMART SM00091 142 210 20.0 T 11-10-2018 IPR000014 PAS domain AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 SMART SM00091 262 328 1.3E-7 T 11-10-2018 IPR000014 PAS domain AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 SMART SM00267 376 548 1.9E-66 T 11-10-2018 IPR000160 GGDEF domain AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 Gene3D G3DSA:3.30.450.20 140 208 1.9E-12 T 11-10-2018 AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 SUPERFAMILY SSF55785 273 383 1.71E-21 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 Pfam PF13426 PAS domain 273 374 2.4E-10 T 11-10-2018 IPR000014 PAS domain AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 SUPERFAMILY SSF55785 21 135 9.42E-17 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 SUPERFAMILY SSF55073 392 549 9.42E-48 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 Pfam PF00990 Diguanylate cyclase, GGDEF domain 387 543 2.9E-49 T 11-10-2018 IPR000160 GGDEF domain AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 383 2.5E-15 T 11-10-2018 IPR000014 PAS domain AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 144 1.1E-12 T 11-10-2018 IPR000014 PAS domain AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 Gene3D G3DSA:3.30.450.20 265 385 1.2E-24 T 11-10-2018 AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 SMART SM00086 95 137 0.0089 T 11-10-2018 IPR001610 PAC motif AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 SMART SM00086 334 376 1.3 T 11-10-2018 IPR001610 PAC motif AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 Gene3D G3DSA:3.30.70.270 386 561 5.6E-60 T 11-10-2018 AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 383 546 1.3E-44 T 11-10-2018 IPR000160 GGDEF domain AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 Pfam PF08448 PAS fold 28 138 1.3E-17 T 11-10-2018 IPR013656 PAS fold-4 AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 SMART SM00052 558 803 1.2E-111 T 11-10-2018 IPR001633 EAL domain AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 Gene3D G3DSA:3.30.450.20 14 139 1.2E-24 T 11-10-2018 AMS64_18980 0510c396c9e1a5fbfbcf0be1366db311 814 Pfam PF00563 EAL domain 566 798 4.6E-73 T 11-10-2018 IPR001633 EAL domain AMS64_16765 d54b4855b28ed3ed7e94c7406e6fc71b 865 Pfam PF13009 Putative phage integrase 39 369 2.1E-121 T 11-10-2018 IPR024965 Putative phage integrase AMS64_16765 d54b4855b28ed3ed7e94c7406e6fc71b 865 Gene3D G3DSA:1.10.443.10 341 524 9.0E-6 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_16765 d54b4855b28ed3ed7e94c7406e6fc71b 865 SUPERFAMILY SSF56349 451 509 2.68E-6 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_05210 d54b4855b28ed3ed7e94c7406e6fc71b 865 Pfam PF13009 Putative phage integrase 39 369 2.1E-121 T 11-10-2018 IPR024965 Putative phage integrase AMS64_05210 d54b4855b28ed3ed7e94c7406e6fc71b 865 Gene3D G3DSA:1.10.443.10 341 524 9.0E-6 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_05210 d54b4855b28ed3ed7e94c7406e6fc71b 865 SUPERFAMILY SSF56349 451 509 2.68E-6 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_12920 ca38cd6dc1b2a6b900016f518fb2c282 481 Gene3D G3DSA:3.40.309.10 230 431 4.7E-148 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMS64_12920 ca38cd6dc1b2a6b900016f518fb2c282 481 PIRSF PIRSF036492 5 481 3.0E-154 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AMS64_12920 ca38cd6dc1b2a6b900016f518fb2c282 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 226 233 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMS64_12920 ca38cd6dc1b2a6b900016f518fb2c282 481 SUPERFAMILY SSF53720 24 477 3.93E-112 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMS64_12920 ca38cd6dc1b2a6b900016f518fb2c282 481 Pfam PF00171 Aldehyde dehydrogenase family 38 451 3.6E-82 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMS64_12920 ca38cd6dc1b2a6b900016f518fb2c282 481 Gene3D G3DSA:3.40.605.10 33 451 4.7E-148 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMS64_17235 f4ba8bb3218350b0006ab9e40b27908d 143 SUPERFAMILY SSF54523 34 139 4.66E-39 T 11-10-2018 AMS64_17235 f4ba8bb3218350b0006ab9e40b27908d 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 1.3E-22 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AMS64_17235 f4ba8bb3218350b0006ab9e40b27908d 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 1.3E-22 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AMS64_17235 f4ba8bb3218350b0006ab9e40b27908d 143 Pfam PF08334 Type II secretion system (T2SS), protein G 31 137 1.3E-38 T 11-10-2018 IPR013545 Type II secretion system protein G AMS64_17235 f4ba8bb3218350b0006ab9e40b27908d 143 Gene3D G3DSA:3.30.700.10 22 137 1.9E-39 T 11-10-2018 AMS64_17235 f4ba8bb3218350b0006ab9e40b27908d 143 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 138 3.0E-57 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AMS64_17235 f4ba8bb3218350b0006ab9e40b27908d 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 4.2E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_17235 f4ba8bb3218350b0006ab9e40b27908d 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 1.5E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_17235 f4ba8bb3218350b0006ab9e40b27908d 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_06885 8c683c2f5b7d4faee8a114f19aeb6edd 418 SMART SM00788 3 417 6.5E-170 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMS64_06885 8c683c2f5b7d4faee8a114f19aeb6edd 418 Gene3D G3DSA:1.10.300.10 99 200 2.1E-69 T 11-10-2018 AMS64_06885 8c683c2f5b7d4faee8a114f19aeb6edd 418 SUPERFAMILY SSF52540 1 417 2.23E-117 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_06885 8c683c2f5b7d4faee8a114f19aeb6edd 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 1.8E-126 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMS64_06885 8c683c2f5b7d4faee8a114f19aeb6edd 418 Gene3D G3DSA:3.40.440.10 6 253 2.1E-69 T 11-10-2018 AMS64_06885 8c683c2f5b7d4faee8a114f19aeb6edd 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 137.189 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMS64_06885 8c683c2f5b7d4faee8a114f19aeb6edd 418 Gene3D G3DSA:3.90.170.10 266 418 3.1E-49 T 11-10-2018 AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 Gene3D G3DSA:3.30.230.40 260 374 1.6E-27 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 Gene3D G3DSA:3.40.50.1000 1 165 2.8E-42 T 11-10-2018 IPR023214 HAD superfamily AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 SUPERFAMILY SSF56784 1 157 8.99E-38 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 374 33.525 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 9.5E-44 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 SUPERFAMILY SSF54211 277 360 6.2E-21 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 148 3.0E-26 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 231 244 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 SUPERFAMILY SSF54211 167 256 6.2E-30 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 374 48.912 T 11-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 Pfam PF13242 HAD-hyrolase-like 103 146 3.3E-5 T 11-10-2018 AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 4 162 2.2E-68 T 11-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 201 356 5.1E-62 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMS64_09095 62de9e367d84731e3b6effe818df4cf7 374 Gene3D G3DSA:3.30.230.40 166 259 1.3E-35 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AMS64_17890 d33d2883264d00b5076674bea744a41a 234 Pfam PF04231 Endonuclease I 27 231 2.8E-43 T 11-10-2018 IPR007346 Endonuclease I GO:0004518 AMS64_17890 d33d2883264d00b5076674bea744a41a 234 SUPERFAMILY SSF54060 23 233 8.47E-85 T 11-10-2018 AMS64_01020 3dcb2d164d3d03c53c3b10f83f88c132 278 SUPERFAMILY SSF50182 110 175 1.05E-16 T 11-10-2018 IPR010920 LSM domain superfamily AMS64_01020 3dcb2d164d3d03c53c3b10f83f88c132 278 Gene3D G3DSA:2.30.30.60 125 174 2.6E-18 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMS64_01020 3dcb2d164d3d03c53c3b10f83f88c132 278 Pfam PF00924 Mechanosensitive ion channel 67 264 2.0E-56 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMS64_01020 3dcb2d164d3d03c53c3b10f83f88c132 278 SUPERFAMILY SSF82689 176 275 4.58E-34 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMS64_01020 3dcb2d164d3d03c53c3b10f83f88c132 278 Gene3D G3DSA:3.30.70.100 175 269 4.2E-28 T 11-10-2018 AMS64_01020 3dcb2d164d3d03c53c3b10f83f88c132 278 SUPERFAMILY SSF82861 23 108 8.63E-17 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMS64_01020 3dcb2d164d3d03c53c3b10f83f88c132 278 Pfam PF05552 Conserved TM helix 11 60 7.8E-13 T 11-10-2018 IPR008910 Conserved TM helix AMS64_21470 2040b2c5b58ab58fcff660a4abc2e7a1 569 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 558 1.9E-294 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_21470 2040b2c5b58ab58fcff660a4abc2e7a1 569 Hamap MF_00577 Urocanate hydratase [hutU]. 9 560 50.152 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_21470 2040b2c5b58ab58fcff660a4abc2e7a1 569 Pfam PF01175 Urocanase Rossmann-like domain 145 353 9.4E-88 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_21470 2040b2c5b58ab58fcff660a4abc2e7a1 569 PIRSF PIRSF001423 1 564 2.0E-297 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_21470 2040b2c5b58ab58fcff660a4abc2e7a1 569 ProSitePatterns PS01233 Urocanase signature. 446 461 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_21470 2040b2c5b58ab58fcff660a4abc2e7a1 569 SUPERFAMILY SSF111326 9 559 3.53E-263 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_21470 2040b2c5b58ab58fcff660a4abc2e7a1 569 Pfam PF17391 Urocanase N-terminal domain 16 142 4.5E-63 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_21470 2040b2c5b58ab58fcff660a4abc2e7a1 569 Pfam PF17392 Urocanase C-terminal domain 356 550 6.0E-92 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_21470 2040b2c5b58ab58fcff660a4abc2e7a1 569 Gene3D G3DSA:3.40.1770.10 21 546 3.8E-262 T 11-10-2018 AMS64_21470 2040b2c5b58ab58fcff660a4abc2e7a1 569 Gene3D G3DSA:3.40.50.10730 146 353 3.8E-262 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_01275 49bc0f6a8325d7f72d9cdda3d779a6ca 303 Gene3D G3DSA:3.30.70.1350 208 291 1.4E-30 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMS64_01275 49bc0f6a8325d7f72d9cdda3d779a6ca 303 Gene3D G3DSA:1.20.1510.10 10 207 2.3E-52 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMS64_01275 49bc0f6a8325d7f72d9cdda3d779a6ca 303 Pfam PF01545 Cation efflux family 15 207 9.1E-36 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMS64_01275 49bc0f6a8325d7f72d9cdda3d779a6ca 303 SUPERFAMILY SSF160240 211 289 1.57E-23 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMS64_01275 49bc0f6a8325d7f72d9cdda3d779a6ca 303 Pfam PF16916 Dimerisation domain of Zinc Transporter 211 287 2.5E-25 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain AMS64_01275 49bc0f6a8325d7f72d9cdda3d779a6ca 303 SUPERFAMILY SSF161111 9 208 8.63E-47 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMS64_01275 49bc0f6a8325d7f72d9cdda3d779a6ca 303 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 287 1.5E-65 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMS64_00755 0cdfa3f80c17c7b778a1de630ba70dce 84 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 6 67 5.3E-9 T 11-10-2018 IPR009778 Modulator of Rho-dependent transcription termination AMS64_00755 0cdfa3f80c17c7b778a1de630ba70dce 84 SUPERFAMILY SSF101744 1 67 9.94E-17 T 11-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 AMS64_00755 0cdfa3f80c17c7b778a1de630ba70dce 84 Gene3D G3DSA:2.30.30.400 7 79 2.8E-7 T 11-10-2018 IPR038626 Rof-like superfamily AMS64_21045 b58558ce9cfebaf69893c39393dec284 294 Pfam PF01430 Hsp33 protein 5 274 9.3E-84 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMS64_21045 b58558ce9cfebaf69893c39393dec284 294 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 285 31.711 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMS64_21045 b58558ce9cfebaf69893c39393dec284 294 SUPERFAMILY SSF64397 5 233 6.54E-74 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMS64_21045 b58558ce9cfebaf69893c39393dec284 294 SUPERFAMILY SSF118352 226 283 3.01E-18 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AMS64_21045 b58558ce9cfebaf69893c39393dec284 294 PIRSF PIRSF005261 1 285 1.4E-69 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMS64_21045 b58558ce9cfebaf69893c39393dec284 294 Gene3D G3DSA:3.90.1280.10 227 285 1.2E-20 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AMS64_21045 b58558ce9cfebaf69893c39393dec284 294 Gene3D G3DSA:3.55.30.10 1 176 1.3E-61 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMS64_21045 b58558ce9cfebaf69893c39393dec284 294 Gene3D G3DSA:1.10.287.480 178 226 9.2E-23 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 SUPERFAMILY SSF47384 436 507 3.92E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 SUPERFAMILY SSF103190 160 304 1.12E-7 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 Pfam PF17202 Single cache domain 3 198 310 3.3E-24 T 11-10-2018 IPR033463 Single cache domain 3 AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 Gene3D G3DSA:1.10.287.130 434 506 2.9E-21 T 11-10-2018 AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 SMART SM00388 442 509 1.4E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 Gene3D G3DSA:3.30.565.10 515 664 9.3E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 661 4.4E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 Pfam PF00512 His Kinase A (phospho-acceptor) domain 442 506 1.8E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 SUPERFAMILY SSF55874 500 660 4.19E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 609 1.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 642 1.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 648 661 1.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 623 1.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_07135 d08f427080ba1ccfd8b5368f35af8edb 691 SMART SM00387 552 664 4.7E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00570 16aa4a3382ea6261a6b883255164d927 458 PIRSF PIRSF004548 1 450 3.3E-166 T 11-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AMS64_00570 16aa4a3382ea6261a6b883255164d927 458 Pfam PF06123 Inner membrane protein CreD 7 432 3.0E-147 T 11-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AMS64_12865 0947d48769849d25e55205c150da4730 399 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 265 290 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_12865 0947d48769849d25e55205c150da4730 399 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 11 389 1.6E-88 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_12865 0947d48769849d25e55205c150da4730 399 Gene3D G3DSA:2.60.120.10 311 389 6.9E-131 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_12865 0947d48769849d25e55205c150da4730 399 SUPERFAMILY SSF51182 7 382 3.32E-100 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_12865 0947d48769849d25e55205c150da4730 399 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 133 141 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_12865 0947d48769849d25e55205c150da4730 399 PIRSF PIRSF001480 7 398 1.0E-99 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_12865 0947d48769849d25e55205c150da4730 399 Gene3D G3DSA:2.60.120.10 14 285 6.9E-131 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_12865 0947d48769849d25e55205c150da4730 399 Gene3D G3DSA:1.10.441.10 157 310 6.9E-131 T 11-10-2018 AMS64_12865 0947d48769849d25e55205c150da4730 399 Pfam PF01238 Phosphomannose isomerase type I 12 364 1.9E-78 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_12865 0947d48769849d25e55205c150da4730 399 PRINTS PR00714 Phosphomannose isomerase type I signature 133 156 1.1E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_12865 0947d48769849d25e55205c150da4730 399 PRINTS PR00714 Phosphomannose isomerase type I signature 246 265 1.1E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_12865 0947d48769849d25e55205c150da4730 399 PRINTS PR00714 Phosphomannose isomerase type I signature 40 55 1.1E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_12865 0947d48769849d25e55205c150da4730 399 PRINTS PR00714 Phosphomannose isomerase type I signature 230 245 1.1E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_12865 0947d48769849d25e55205c150da4730 399 PRINTS PR00714 Phosphomannose isomerase type I signature 265 284 1.1E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_12865 0947d48769849d25e55205c150da4730 399 PRINTS PR00714 Phosphomannose isomerase type I signature 284 303 1.1E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_12865 0947d48769849d25e55205c150da4730 399 PRINTS PR00714 Phosphomannose isomerase type I signature 88 109 1.1E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_12865 0947d48769849d25e55205c150da4730 399 PRINTS PR00714 Phosphomannose isomerase type I signature 12 30 1.1E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMS64_04595 77c13cb915e9b29b099d583107e192fc 409 Gene3D G3DSA:1.20.1250.20 2 401 6.2E-60 T 11-10-2018 AMS64_04595 77c13cb915e9b29b099d583107e192fc 409 SUPERFAMILY SSF103473 1 402 4.32E-58 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_04595 77c13cb915e9b29b099d583107e192fc 409 Pfam PF07690 Major Facilitator Superfamily 15 306 8.8E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_04595 77c13cb915e9b29b099d583107e192fc 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 74 90 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMS64_15900 48ac8f3f7b4a0081ddd17290ab98624d 82 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 8 80 1.8E-20 T 11-10-2018 IPR013468 Conserved hypothetical protein CHP02647 AMS64_15900 48ac8f3f7b4a0081ddd17290ab98624d 82 Pfam PF06146 Phosphate-starvation-inducible E 11 74 5.1E-5 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 Pfam PF14450 Cell division protein FtsA 207 381 9.7E-24 T 11-10-2018 AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 PIRSF PIRSF003101 1 419 3.4E-154 T 11-10-2018 IPR020823 Cell division protein FtsA AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 Pfam PF14450 Cell division protein FtsA 11 187 1.3E-10 T 11-10-2018 AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.7E-29 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 SUPERFAMILY SSF53067 8 221 1.86E-63 T 11-10-2018 AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 419 29.787 T 11-10-2018 IPR020823 Cell division protein FtsA AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 Gene3D G3DSA:3.30.1490.110 87 169 3.7E-116 T 11-10-2018 AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 SUPERFAMILY SSF53067 198 384 6.74E-44 T 11-10-2018 AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 208 221 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 SMART SM00842 10 196 4.0E-101 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 2.8E-158 T 11-10-2018 IPR020823 Cell division protein FtsA AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 Gene3D G3DSA:3.30.420.40 197 359 3.7E-116 T 11-10-2018 AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 Gene3D G3DSA:3.30.420.40 13 379 3.7E-116 T 11-10-2018 AMS64_03265 0e93bae4d6c739a9ad44a057eacdc8b0 419 Gene3D G3DSA:3.90.640.10 235 300 3.7E-116 T 11-10-2018 AMS64_21005 db084daa1870ace4d2465436ae1b15f8 238 Gene3D G3DSA:3.40.50.510 1 127 8.6E-42 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AMS64_21005 db084daa1870ace4d2465436ae1b15f8 238 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 156 231 4.6E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_21005 db084daa1870ace4d2465436ae1b15f8 238 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 164 171 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMS64_21005 db084daa1870ace4d2465436ae1b15f8 238 Gene3D G3DSA:3.30.1340.10 154 238 8.7E-22 T 11-10-2018 IPR035895 HPr-like superfamily AMS64_21005 db084daa1870ace4d2465436ae1b15f8 238 PRINTS PR00107 Phosphocarrier protein signature 204 221 3.7E-11 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_21005 db084daa1870ace4d2465436ae1b15f8 238 PRINTS PR00107 Phosphocarrier protein signature 164 180 3.7E-11 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_21005 db084daa1870ace4d2465436ae1b15f8 238 PRINTS PR00107 Phosphocarrier protein signature 189 204 3.7E-11 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_21005 db084daa1870ace4d2465436ae1b15f8 238 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 123 6.2E-32 T 11-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain AMS64_21005 db084daa1870ace4d2465436ae1b15f8 238 Pfam PF03610 PTS system fructose IIA component 3 117 4.8E-20 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMS64_21005 db084daa1870ace4d2465436ae1b15f8 238 Pfam PF00381 PTS HPr component phosphorylation site 156 231 1.8E-19 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_21005 db084daa1870ace4d2465436ae1b15f8 238 SUPERFAMILY SSF55594 153 238 2.88E-20 T 11-10-2018 IPR035895 HPr-like superfamily AMS64_21005 db084daa1870ace4d2465436ae1b15f8 238 SUPERFAMILY SSF53062 1 125 8.11E-31 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AMS64_08100 1562ab047bc25ceb0870625b6223f177 754 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 752 36.628 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMS64_08100 1562ab047bc25ceb0870625b6223f177 754 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 311 2.2E-119 T 11-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMS64_08100 1562ab047bc25ceb0870625b6223f177 754 Gene3D G3DSA:3.20.20.210 6 518 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMS64_08100 1562ab047bc25ceb0870625b6223f177 754 Gene3D G3DSA:3.20.20.210 383 750 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMS64_08100 1562ab047bc25ceb0870625b6223f177 754 SUPERFAMILY SSF51726 4 377 8.11E-107 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMS64_08100 1562ab047bc25ceb0870625b6223f177 754 PIRSF PIRSF000382 1 754 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMS64_08100 1562ab047bc25ceb0870625b6223f177 754 SUPERFAMILY SSF51726 390 751 1.44E-118 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMS64_08100 1562ab047bc25ceb0870625b6223f177 754 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 752 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMS64_08100 1562ab047bc25ceb0870625b6223f177 754 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 425 747 1.1E-150 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMS64_02120 52adc6d36405c70823a2a39b604b8a3e 462 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 249 1.9E-32 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_02120 52adc6d36405c70823a2a39b604b8a3e 462 Pfam PF00990 Diguanylate cyclase, GGDEF domain 300 453 9.5E-36 T 11-10-2018 IPR000160 GGDEF domain AMS64_02120 52adc6d36405c70823a2a39b604b8a3e 462 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 296 455 4.2E-35 T 11-10-2018 IPR000160 GGDEF domain AMS64_02120 52adc6d36405c70823a2a39b604b8a3e 462 Gene3D G3DSA:3.30.70.270 286 457 4.6E-49 T 11-10-2018 AMS64_02120 52adc6d36405c70823a2a39b604b8a3e 462 SUPERFAMILY SSF55073 305 456 2.43E-40 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_02120 52adc6d36405c70823a2a39b604b8a3e 462 Gene3D G3DSA:3.40.190.10 33 248 9.8E-38 T 11-10-2018 AMS64_02120 52adc6d36405c70823a2a39b604b8a3e 462 SUPERFAMILY SSF53850 37 251 2.11E-42 T 11-10-2018 AMS64_02120 52adc6d36405c70823a2a39b604b8a3e 462 SMART SM00062 33 252 5.3E-11 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_02120 52adc6d36405c70823a2a39b604b8a3e 462 SMART SM00267 289 458 6.0E-52 T 11-10-2018 IPR000160 GGDEF domain AMS64_02120 52adc6d36405c70823a2a39b604b8a3e 462 Gene3D G3DSA:3.40.190.10 118 211 9.8E-38 T 11-10-2018 AMS64_03190 18788c54994cf50464e8a6e18f1bf4f0 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 63 6.8E-14 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain AMS64_03190 18788c54994cf50464e8a6e18f1bf4f0 315 SUPERFAMILY SSF103088 166 282 1.7E-19 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_03190 18788c54994cf50464e8a6e18f1bf4f0 315 Pfam PF00691 OmpA family 181 275 3.9E-13 T 11-10-2018 IPR006665 OmpA-like domain AMS64_03190 18788c54994cf50464e8a6e18f1bf4f0 315 Gene3D G3DSA:3.30.1330.60 134 312 1.3E-44 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_08510 68b12d348421dfcaa77d7ee4671892be 280 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 41.347 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AMS64_08510 68b12d348421dfcaa77d7ee4671892be 280 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AMS64_08510 68b12d348421dfcaa77d7ee4671892be 280 SUPERFAMILY SSF51658 1 279 7.86E-99 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AMS64_08510 68b12d348421dfcaa77d7ee4671892be 280 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 1.5E-101 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AMS64_08510 68b12d348421dfcaa77d7ee4671892be 280 SMART SM00518 3 279 1.3E-115 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AMS64_08510 68b12d348421dfcaa77d7ee4671892be 280 Pfam PF01261 Xylose isomerase-like TIM barrel 19 238 7.8E-39 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMS64_08510 68b12d348421dfcaa77d7ee4671892be 280 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AMS64_08510 68b12d348421dfcaa77d7ee4671892be 280 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AMS64_08510 68b12d348421dfcaa77d7ee4671892be 280 Gene3D G3DSA:3.20.20.150 1 279 4.4E-109 T 11-10-2018 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 32 1.3E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 PIRSF PIRSF000310 2 367 2.1E-133 T 11-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 230 248 3.3E-68 T 11-10-2018 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 155 179 3.3E-68 T 11-10-2018 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 254 280 3.3E-68 T 11-10-2018 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 43 65 3.3E-68 T 11-10-2018 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 66 90 3.3E-68 T 11-10-2018 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 112 135 3.3E-68 T 11-10-2018 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 212 229 3.3E-68 T 11-10-2018 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 186 209 3.3E-68 T 11-10-2018 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 58 205 8.8E-33 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 SUPERFAMILY SSF56770 43 308 2.35E-86 T 11-10-2018 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 Gene3D G3DSA:3.40.50.700 36 223 1.8E-70 T 11-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 5 366 1.0E-166 T 11-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 Gene3D G3DSA:4.10.480.10 225 316 1.2E-30 T 11-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily AMS64_10380 364ab5d6fd586e7e3425ef5086d8f035 377 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 225 309 1.5E-26 T 11-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AMS64_15710 5f3566b008a503e65a8b8ca55be4a029 253 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 237 1.6E-62 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMS64_15710 5f3566b008a503e65a8b8ca55be4a029 253 SUPERFAMILY SSF102705 4 252 6.28E-84 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AMS64_15710 5f3566b008a503e65a8b8ca55be4a029 253 Gene3D G3DSA:3.40.1390.30 98 224 4.5E-86 T 11-10-2018 AMS64_15710 5f3566b008a503e65a8b8ca55be4a029 253 Gene3D G3DSA:3.40.1390.30 15 237 4.5E-86 T 11-10-2018 AMS64_15710 5f3566b008a503e65a8b8ca55be4a029 253 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 252 5.1E-73 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 SMART SM00478 39 190 3.6E-49 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 274 2.1E-115 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 Gene3D G3DSA:3.90.79.10 233 347 1.6E-11 T 11-10-2018 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.6E-7 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 SUPERFAMILY SSF55811 220 344 2.47E-24 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 Pfam PF14815 NUDIX domain 235 344 4.6E-21 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 167 9.6E-21 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 SMART SM00525 191 211 0.0074 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 Gene3D G3DSA:1.10.1670.10 9 209 7.4E-87 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 SUPERFAMILY SSF48150 4 224 4.4E-77 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AMS64_04205 6dec6cb18ee153367c8ca02a9443d860 350 Gene3D G3DSA:1.10.340.30 21 132 7.4E-87 T 11-10-2018 AMS64_03535 f4a5a1a7fbe2e393216625238f71abd5 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_03535 f4a5a1a7fbe2e393216625238f71abd5 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_03535 f4a5a1a7fbe2e393216625238f71abd5 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_03535 f4a5a1a7fbe2e393216625238f71abd5 294 Pfam PF03466 LysR substrate binding domain 89 290 7.7E-46 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_03535 f4a5a1a7fbe2e393216625238f71abd5 294 Gene3D G3DSA:3.40.190.10 92 283 5.5E-48 T 11-10-2018 AMS64_03535 f4a5a1a7fbe2e393216625238f71abd5 294 SUPERFAMILY SSF46785 1 86 4.44E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_03535 f4a5a1a7fbe2e393216625238f71abd5 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.2E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_03535 f4a5a1a7fbe2e393216625238f71abd5 294 Gene3D G3DSA:1.10.10.10 1 91 2.1E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_03535 f4a5a1a7fbe2e393216625238f71abd5 294 SUPERFAMILY SSF53850 90 292 5.43E-40 T 11-10-2018 AMS64_03535 f4a5a1a7fbe2e393216625238f71abd5 294 Gene3D G3DSA:3.40.190.10 162 264 5.5E-48 T 11-10-2018 AMS64_03965 41a938756f2221fd8423d755a105be6b 381 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 7.3E-24 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AMS64_03965 41a938756f2221fd8423d755a105be6b 381 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 3.5E-17 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMS64_03965 41a938756f2221fd8423d755a105be6b 381 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 3.5E-17 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMS64_03965 41a938756f2221fd8423d755a105be6b 381 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 3.5E-17 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMS64_03965 41a938756f2221fd8423d755a105be6b 381 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 3.5E-17 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMS64_03965 41a938756f2221fd8423d755a105be6b 381 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 150 372 1.9E-58 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AMS64_03965 41a938756f2221fd8423d755a105be6b 381 Gene3D G3DSA:3.40.50.720 1 205 9.3E-78 T 11-10-2018 AMS64_03965 41a938756f2221fd8423d755a105be6b 381 Gene3D G3DSA:1.10.1040.10 207 381 3.3E-69 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMS64_03965 41a938756f2221fd8423d755a105be6b 381 SUPERFAMILY SSF51735 1 202 3.33E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_03965 41a938756f2221fd8423d755a105be6b 381 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 11-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMS64_03965 41a938756f2221fd8423d755a105be6b 381 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 40.889 T 11-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMS64_03965 41a938756f2221fd8423d755a105be6b 381 SUPERFAMILY SSF48179 204 381 5.1E-46 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_03990 acd7d5766a20e19b26f3432c27aa181e 213 ProSitePatterns PS00893 Nudix box signature. 98 119 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMS64_03990 acd7d5766a20e19b26f3432c27aa181e 213 Pfam PF00293 NUDIX domain 60 181 4.9E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_03990 acd7d5766a20e19b26f3432c27aa181e 213 SUPERFAMILY SSF55811 10 204 7.45E-46 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_03990 acd7d5766a20e19b26f3432c27aa181e 213 Gene3D G3DSA:3.90.79.10 7 210 6.1E-63 T 11-10-2018 AMS64_03990 acd7d5766a20e19b26f3432c27aa181e 213 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 16 200 2.3E-64 T 11-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AMS64_14990 bfe4b41ea6f935433bf02c0b8505ac3e 110 Pfam PF05164 Cell division protein ZapA 6 90 1.1E-20 T 11-10-2018 IPR007838 Cell division protein ZapA-like AMS64_14990 bfe4b41ea6f935433bf02c0b8505ac3e 110 Gene3D G3DSA:1.10.20.30 1 47 1.0E-16 T 11-10-2018 AMS64_14990 bfe4b41ea6f935433bf02c0b8505ac3e 110 SUPERFAMILY SSF102829 6 94 4.05E-24 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily AMS64_14990 bfe4b41ea6f935433bf02c0b8505ac3e 110 Gene3D G3DSA:1.20.5.50 49 103 1.2E-8 T 11-10-2018 AMS64_19555 36ef259f1c1c1b844deda909902833e7 154 Gene3D G3DSA:3.40.30.10 4 154 9.0E-49 T 11-10-2018 AMS64_19555 36ef259f1c1c1b844deda909902833e7 154 Pfam PF00578 AhpC/TSA family 7 134 3.0E-39 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMS64_19555 36ef259f1c1c1b844deda909902833e7 154 PIRSF PIRSF000239 1 142 8.1E-18 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMS64_19555 36ef259f1c1c1b844deda909902833e7 154 SUPERFAMILY SSF52833 3 153 8.17E-49 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_01910 f1999657013b220ff60b82d8fb1fff4e 254 SUPERFAMILY SSF53474 3 253 2.37E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_01910 f1999657013b220ff60b82d8fb1fff4e 254 Pfam PF00561 alpha/beta hydrolase fold 14 242 1.2E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_01910 f1999657013b220ff60b82d8fb1fff4e 254 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 3 254 44.807 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AMS64_01910 f1999657013b220ff60b82d8fb1fff4e 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 8.6E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_01910 f1999657013b220ff60b82d8fb1fff4e 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 8.6E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_01910 f1999657013b220ff60b82d8fb1fff4e 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 37 52 8.6E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_01910 f1999657013b220ff60b82d8fb1fff4e 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 78 91 8.6E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_01910 f1999657013b220ff60b82d8fb1fff4e 254 Gene3D G3DSA:3.40.50.1820 1 253 3.4E-69 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_01910 f1999657013b220ff60b82d8fb1fff4e 254 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 9 253 7.1E-92 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AMS64_09280 f24697fadb09879a0642339c20b07f7b 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 192 1.5E-30 T 11-10-2018 AMS64_09280 f24697fadb09879a0642339c20b07f7b 231 Gene3D G3DSA:3.40.50.1000 12 200 1.6E-51 T 11-10-2018 IPR023214 HAD superfamily AMS64_09280 f24697fadb09879a0642339c20b07f7b 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 190 1.2E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_09280 f24697fadb09879a0642339c20b07f7b 231 SUPERFAMILY SSF56784 9 223 6.67E-54 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_09280 f24697fadb09879a0642339c20b07f7b 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 6.5E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_09280 f24697fadb09879a0642339c20b07f7b 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 6.5E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_09280 f24697fadb09879a0642339c20b07f7b 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 6.5E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_09280 f24697fadb09879a0642339c20b07f7b 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 6.5E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_09280 f24697fadb09879a0642339c20b07f7b 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 187 4.4E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_09280 f24697fadb09879a0642339c20b07f7b 231 Gene3D G3DSA:1.10.150.240 24 92 1.6E-51 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMS64_13830 ab8c290c10472e5fc7015db5f63592f6 123 SUPERFAMILY SSF69635 2 121 2.67E-42 T 11-10-2018 AMS64_13830 ab8c290c10472e5fc7015db5f63592f6 123 Gene3D G3DSA:3.30.1460.10 1 123 3.2E-45 T 11-10-2018 AMS64_13830 ab8c290c10472e5fc7015db5f63592f6 123 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 3.7E-41 T 11-10-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 AMS64_07725 ab8c290c10472e5fc7015db5f63592f6 123 SUPERFAMILY SSF69635 2 121 2.67E-42 T 11-10-2018 AMS64_07725 ab8c290c10472e5fc7015db5f63592f6 123 Gene3D G3DSA:3.30.1460.10 1 123 3.2E-45 T 11-10-2018 AMS64_07725 ab8c290c10472e5fc7015db5f63592f6 123 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 3.7E-41 T 11-10-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 AMS64_00030 c42dc3d8ddc22ecadde7b95b8fc2b952 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 5.0E-116 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 AMS64_00030 c42dc3d8ddc22ecadde7b95b8fc2b952 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 7.7E-35 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 AMS64_00030 c42dc3d8ddc22ecadde7b95b8fc2b952 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 2.1E-42 T 11-10-2018 IPR013527 YicC-like, N-terminal AMS64_13305 434573c110eeaf7737643bb16836c372 668 SUPERFAMILY SSF58104 359 666 2.35E-74 T 11-10-2018 AMS64_13305 434573c110eeaf7737643bb16836c372 668 Gene3D G3DSA:1.10.287.950 340 668 2.2E-65 T 11-10-2018 AMS64_13305 434573c110eeaf7737643bb16836c372 668 SMART SM00304 339 391 0.0086 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13305 434573c110eeaf7737643bb16836c372 668 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 2.6E-8 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_13305 434573c110eeaf7737643bb16836c372 668 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 2.6E-8 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_13305 434573c110eeaf7737643bb16836c372 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 632 1.0E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_13305 434573c110eeaf7737643bb16836c372 668 SMART SM00283 406 667 2.7E-73 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.9E-65 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 1.9E-65 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 1.9E-65 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 1.9E-65 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.9E-65 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 1.9E-65 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.769 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 Pfam PF01842 ACT domain 5 66 4.0E-8 T 11-10-2018 IPR002912 ACT domain AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 4 277 4.1E-123 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 Gene3D G3DSA:3.40.50.170 81 278 1.0E-64 T 11-10-2018 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 Gene3D G3DSA:3.30.70.260 1 78 7.6E-16 T 11-10-2018 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 PIRSF PIRSF036480 1 278 5.8E-113 T 11-10-2018 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 SUPERFAMILY SSF55021 4 66 3.08E-8 T 11-10-2018 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 Pfam PF00551 Formyl transferase 82 259 1.1E-45 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMS64_13220 7056068ac99722e5fcfbfec7712d7227 278 SUPERFAMILY SSF53328 82 278 1.96E-57 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMS64_09145 73813a019cba80a62f9aa7798095be9c 370 SUPERFAMILY SSF47819 190 299 2.8E-28 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AMS64_09145 73813a019cba80a62f9aa7798095be9c 370 SMART SM00341 208 287 4.3E-6 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMS64_09145 73813a019cba80a62f9aa7798095be9c 370 Hamap MF_01899 Ribonuclease D [rnd]. 3 370 42.975 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AMS64_09145 73813a019cba80a62f9aa7798095be9c 370 SUPERFAMILY SSF53098 1 207 8.46E-56 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_09145 73813a019cba80a62f9aa7798095be9c 370 Gene3D G3DSA:3.30.420.10 1 191 2.7E-57 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_09145 73813a019cba80a62f9aa7798095be9c 370 Gene3D G3DSA:1.10.150.80 193 291 8.0E-21 T 11-10-2018 AMS64_09145 73813a019cba80a62f9aa7798095be9c 370 Pfam PF00570 HRDC domain 211 277 1.1E-12 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMS64_09145 73813a019cba80a62f9aa7798095be9c 370 SUPERFAMILY SSF47819 294 369 7.85E-19 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AMS64_09145 73813a019cba80a62f9aa7798095be9c 370 Pfam PF01612 3'-5' exonuclease 3 168 2.6E-31 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMS64_09145 73813a019cba80a62f9aa7798095be9c 370 SMART SM00474 3 169 4.6E-32 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMS64_09145 73813a019cba80a62f9aa7798095be9c 370 TIGRFAM TIGR01388 rnd: ribonuclease D 5 368 1.8E-112 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AMS64_09145 73813a019cba80a62f9aa7798095be9c 370 Gene3D G3DSA:1.10.150.80 292 370 1.6E-26 T 11-10-2018 AMS64_09480 75a02e1206344bf89064ed5cbdbc2768 327 Gene3D G3DSA:1.10.760.10 211 297 6.2E-72 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_09480 75a02e1206344bf89064ed5cbdbc2768 327 SUPERFAMILY SSF46626 55 237 3.11E-28 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_09480 75a02e1206344bf89064ed5cbdbc2768 327 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 230 3.4E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_09480 75a02e1206344bf89064ed5cbdbc2768 327 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 243 317 2.8E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_09480 75a02e1206344bf89064ed5cbdbc2768 327 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 116 324 1.6E-59 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AMS64_09480 75a02e1206344bf89064ed5cbdbc2768 327 SUPERFAMILY SSF46626 243 325 5.02E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_09480 75a02e1206344bf89064ed5cbdbc2768 327 Gene3D G3DSA:1.10.760.10 145 320 6.2E-72 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_09480 75a02e1206344bf89064ed5cbdbc2768 327 Gene3D G3DSA:1.20.58.1490 1 93 3.1E-30 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily AMS64_09480 75a02e1206344bf89064ed5cbdbc2768 327 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 1.6E-20 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AMS64_09480 75a02e1206344bf89064ed5cbdbc2768 327 PIRSF PIRSF000006 1 324 2.8E-104 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AMS64_09480 75a02e1206344bf89064ed5cbdbc2768 327 PRINTS PR00605 Class IC cytochrome C signature 295 317 4.5E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMS64_09480 75a02e1206344bf89064ed5cbdbc2768 327 PRINTS PR00605 Class IC cytochrome C signature 251 262 4.5E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMS64_18665 4c0af60610f043203be4acae60a92fbd 129 Gene3D G3DSA:3.30.700.10 13 127 7.3E-20 T 11-10-2018 AMS64_18665 4c0af60610f043203be4acae60a92fbd 129 SUPERFAMILY SSF54523 13 119 3.77E-21 T 11-10-2018 AMS64_18665 4c0af60610f043203be4acae60a92fbd 129 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 1.1E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_18665 4c0af60610f043203be4acae60a92fbd 129 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 1.5E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_18665 4c0af60610f043203be4acae60a92fbd 129 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 34 112 4.2E-17 T 11-10-2018 IPR031982 Type IV minor pilin ComP AMS64_18665 4c0af60610f043203be4acae60a92fbd 129 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_15170 e4d1061fceb955ef99a21313bef7bf1f 179 Gene3D G3DSA:3.40.50.1820 1 179 5.9E-16 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_15170 e4d1061fceb955ef99a21313bef7bf1f 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.881 T 11-10-2018 IPR022987 Uncharacterised protein family UPF0227 AMS64_15170 e4d1061fceb955ef99a21313bef7bf1f 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 8.4E-64 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AMS64_07620 52387e5335383d5c948a3ebf4ad715a6 636 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 164 247 4.6E-29 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AMS64_07620 52387e5335383d5c948a3ebf4ad715a6 636 Gene3D G3DSA:3.40.930.10 1 147 3.5E-43 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_07620 52387e5335383d5c948a3ebf4ad715a6 636 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 277 617 1.1E-84 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AMS64_07620 52387e5335383d5c948a3ebf4ad715a6 636 SUPERFAMILY SSF55804 1 145 9.55E-38 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_07620 52387e5335383d5c948a3ebf4ad715a6 636 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 9.1E-37 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMS64_07620 52387e5335383d5c948a3ebf4ad715a6 636 Gene3D G3DSA:3.40.50.2300 152 262 6.3E-38 T 11-10-2018 AMS64_07620 52387e5335383d5c948a3ebf4ad715a6 636 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 166 255 5.0E-15 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMS64_07620 52387e5335383d5c948a3ebf4ad715a6 636 SUPERFAMILY SSF52794 163 259 2.09E-33 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AMS64_07620 52387e5335383d5c948a3ebf4ad715a6 636 Pfam PF02378 Phosphotransferase system, EIIC 289 565 1.3E-15 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMS64_07620 52387e5335383d5c948a3ebf4ad715a6 636 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 132 1.5E-41 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AMS64_07595 6dee4d39c59117d35d8858d0a6cb723d 163 Pfam PF00293 NUDIX domain 24 129 6.7E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_07595 6dee4d39c59117d35d8858d0a6cb723d 163 SUPERFAMILY SSF55811 17 158 8.8E-27 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_07595 6dee4d39c59117d35d8858d0a6cb723d 163 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMS64_07595 6dee4d39c59117d35d8858d0a6cb723d 163 Gene3D G3DSA:3.90.79.10 11 162 1.6E-34 T 11-10-2018 AMS64_01865 0012136f607b01444948a2c7ba7b82bf 335 Gene3D G3DSA:3.40.50.2300 70 311 2.8E-62 T 11-10-2018 AMS64_01865 0012136f607b01444948a2c7ba7b82bf 335 Gene3D G3DSA:3.40.50.2300 164 295 2.8E-62 T 11-10-2018 AMS64_01865 0012136f607b01444948a2c7ba7b82bf 335 SUPERFAMILY SSF47413 7 65 8.04E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_01865 0012136f607b01444948a2c7ba7b82bf 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 11-10-2018 AMS64_01865 0012136f607b01444948a2c7ba7b82bf 335 SMART SM00354 8 78 9.6E-28 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_01865 0012136f607b01444948a2c7ba7b82bf 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 2.7E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_01865 0012136f607b01444948a2c7ba7b82bf 335 Pfam PF13377 Periplasmic binding protein-like domain 176 333 8.8E-24 T 11-10-2018 AMS64_01865 0012136f607b01444948a2c7ba7b82bf 335 SUPERFAMILY SSF53822 66 321 2.55E-53 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_01865 0012136f607b01444948a2c7ba7b82bf 335 Gene3D G3DSA:1.10.260.40 1 64 1.4E-18 T 11-10-2018 AMS64_18180 2dd85f4be87c4fc1ca61cf3ef4bfa388 713 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 549 576 6.1E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_18180 2dd85f4be87c4fc1ca61cf3ef4bfa388 713 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 578 607 6.1E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_18180 2dd85f4be87c4fc1ca61cf3ef4bfa388 713 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 378 6.1E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_18180 2dd85f4be87c4fc1ca61cf3ef4bfa388 713 SMART SM00304 382 436 2.9E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_18180 2dd85f4be87c4fc1ca61cf3ef4bfa388 713 Pfam PF00672 HAMP domain 382 432 3.4E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_18180 2dd85f4be87c4fc1ca61cf3ef4bfa388 713 Gene3D G3DSA:1.10.287.950 381 713 4.6E-74 T 11-10-2018 AMS64_18180 2dd85f4be87c4fc1ca61cf3ef4bfa388 713 Pfam PF02743 Cache domain 49 333 8.6E-15 T 11-10-2018 IPR033479 Double Cache domain 1 AMS64_18180 2dd85f4be87c4fc1ca61cf3ef4bfa388 713 SMART SM00283 451 712 6.8E-73 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_18180 2dd85f4be87c4fc1ca61cf3ef4bfa388 713 Gene3D G3DSA:3.30.450.20 93 238 3.4E-33 T 11-10-2018 AMS64_18180 2dd85f4be87c4fc1ca61cf3ef4bfa388 713 SUPERFAMILY SSF58104 404 713 1.83E-78 T 11-10-2018 AMS64_18180 2dd85f4be87c4fc1ca61cf3ef4bfa388 713 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 497 679 2.7E-45 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_18180 2dd85f4be87c4fc1ca61cf3ef4bfa388 713 Gene3D G3DSA:3.30.450.20 239 341 3.4E-33 T 11-10-2018 AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 68 728 5.4E-253 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 Pfam PF08206 Ribonuclease B OB domain 88 144 3.7E-21 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 SUPERFAMILY SSF50249 221 645 6.28E-144 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 SUPERFAMILY SSF50249 68 147 2.65E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 SMART SM00955 261 589 1.2E-184 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 ProSitePatterns PS01175 Ribonuclease II family signature. 556 580 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 SUPERFAMILY SSF50249 646 740 3.76E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 Hamap MF_01895 Ribonuclease R [rnr]. 39 728 57.436 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 SUPERFAMILY SSF50249 139 237 8.4E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 TIGRFAM TIGR02063 RNase_R: ribonuclease R 20 729 9.5E-273 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 SMART SM00357 87 146 2.0E-13 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 Pfam PF00575 S1 RNA binding domain 645 725 2.7E-13 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 Gene3D G3DSA:2.40.50.140 75 149 3.1E-16 T 11-10-2018 AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 SMART SM00316 645 728 2.0E-14 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 Gene3D G3DSA:2.40.50.140 648 769 2.4E-25 T 11-10-2018 AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 Pfam PF00773 RNB domain 261 585 1.8E-104 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AMS64_04240 3ad12201da95c9bd2665c02916a2f1d1 797 Pfam PF08461 Ribonuclease R winged-helix domain 24 82 1.5E-13 T 11-10-2018 IPR013668 Ribonuclease R winged-helix domain AMS64_02770 38d1dc8cda7ffaeaf6be90868612fa67 85 Pfam PF01722 BolA-like protein 19 74 3.7E-13 T 11-10-2018 IPR002634 BolA protein AMS64_02770 38d1dc8cda7ffaeaf6be90868612fa67 85 PIRSF PIRSF003113 1 84 5.2E-21 T 11-10-2018 IPR002634 BolA protein AMS64_02770 38d1dc8cda7ffaeaf6be90868612fa67 85 SUPERFAMILY SSF82657 1 81 1.44E-27 T 11-10-2018 IPR036065 BolA-like superfamily AMS64_02770 38d1dc8cda7ffaeaf6be90868612fa67 85 Gene3D G3DSA:3.30.300.90 1 83 1.5E-32 T 11-10-2018 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 Gene3D G3DSA:3.30.230.10 221 392 2.1E-75 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 SMART SM00433 36 796 1.8E-278 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 SUPERFAMILY SSF54211 221 391 8.54E-61 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 731 792 5.8E-30 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR01159 DNA gyrase subunit B signature 756 768 9.9E-80 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR01159 DNA gyrase subunit B signature 470 479 9.9E-80 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR01159 DNA gyrase subunit B signature 181 196 9.9E-80 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR01159 DNA gyrase subunit B signature 6 16 9.9E-80 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR01159 DNA gyrase subunit B signature 360 374 9.9E-80 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR01159 DNA gyrase subunit B signature 374 394 9.9E-80 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR01159 DNA gyrase subunit B signature 312 328 9.9E-80 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR01159 DNA gyrase subunit B signature 220 242 9.9E-80 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR01159 DNA gyrase subunit B signature 196 209 9.9E-80 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR01159 DNA gyrase subunit B signature 772 788 9.9E-80 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 SMART SM00387 32 176 1.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 SUPERFAMILY SSF56719 394 794 3.4E-86 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 Pfam PF00204 DNA gyrase B 221 390 1.2E-59 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 803 106.32 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 SUPERFAMILY SSF55874 6 218 4.02E-75 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 Gene3D G3DSA:3.40.50.670 398 570 3.1E-73 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 Gene3D G3DSA:3.40.50.670 686 803 2.6E-25 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 173 1.5E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 803 0.0 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 Gene3D G3DSA:3.10.20.690 592 682 3.4E-25 T 11-10-2018 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR00418 DNA topoisomerase II family signature 114 128 1.2E-71 T 11-10-2018 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR00418 DNA topoisomerase II family signature 71 84 1.2E-71 T 11-10-2018 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.2E-71 T 11-10-2018 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.2E-71 T 11-10-2018 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR00418 DNA topoisomerase II family signature 735 751 1.2E-71 T 11-10-2018 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR00418 DNA topoisomerase II family signature 36 51 1.2E-71 T 11-10-2018 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.2E-71 T 11-10-2018 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.2E-71 T 11-10-2018 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 PRINTS PR00418 DNA topoisomerase II family signature 268 281 1.2E-71 T 11-10-2018 AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 Gene3D G3DSA:3.30.565.10 2 220 6.9E-93 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_00415 4011f9cbe8d5bde7912d96bfaba7b442 803 Pfam PF01751 Toprim domain 419 531 1.8E-18 T 11-10-2018 IPR006171 TOPRIM domain AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 SUPERFAMILY SSF51905 1 314 1.3E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 SUPERFAMILY SSF55424 321 440 2.92E-33 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 328 430 4.1E-18 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 298 5.7E-58 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 Gene3D G3DSA:3.50.50.60 2 338 6.2E-158 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 3.9E-25 T 11-10-2018 AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 3.9E-25 T 11-10-2018 AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 3.9E-25 T 11-10-2018 AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 3.9E-25 T 11-10-2018 AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 3.9E-25 T 11-10-2018 AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 Gene3D G3DSA:3.50.50.60 111 438 6.2E-158 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 3.6E-16 T 11-10-2018 AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 3.6E-16 T 11-10-2018 AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 3.6E-16 T 11-10-2018 AMS64_21970 3db82917e3a9f14c82b6aeff121fe842 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 3.6E-16 T 11-10-2018 AMS64_05115 5c3c4b848da9535be5658bb4424e3753 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMS64_05115 5c3c4b848da9535be5658bb4424e3753 158 Pfam PF02542 YgbB family 2 155 1.2E-62 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMS64_05115 5c3c4b848da9535be5658bb4424e3753 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 7.6E-67 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMS64_05115 5c3c4b848da9535be5658bb4424e3753 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.246 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMS64_05115 5c3c4b848da9535be5658bb4424e3753 158 SUPERFAMILY SSF69765 1 157 5.23E-64 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMS64_05115 5c3c4b848da9535be5658bb4424e3753 158 Gene3D G3DSA:3.30.1330.50 1 158 2.5E-68 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMS64_21210 13fe10ba3ca20d7ce34e6d2ec0f6021a 409 Pfam PF00589 Phage integrase family 212 374 3.0E-20 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_21210 13fe10ba3ca20d7ce34e6d2ec0f6021a 409 Pfam PF13356 Arm DNA-binding domain 24 91 3.3E-8 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AMS64_21210 13fe10ba3ca20d7ce34e6d2ec0f6021a 409 Gene3D G3DSA:1.10.150.130 106 209 1.4E-9 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_21210 13fe10ba3ca20d7ce34e6d2ec0f6021a 409 Gene3D G3DSA:3.30.160.390 1 105 1.9E-12 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AMS64_21210 13fe10ba3ca20d7ce34e6d2ec0f6021a 409 Gene3D G3DSA:1.10.443.10 210 385 2.9E-17 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_21210 13fe10ba3ca20d7ce34e6d2ec0f6021a 409 SUPERFAMILY SSF56349 105 383 9.71E-39 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_08965 521b0e85f7b7bca73afab889c069139a 356 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 313 6.3E-89 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AMS64_08965 521b0e85f7b7bca73afab889c069139a 356 Gene3D G3DSA:1.20.1420.30 34 311 5.7E-90 T 11-10-2018 AMS64_08965 521b0e85f7b7bca73afab889c069139a 356 Pfam PF01699 Sodium/calcium exchanger protein 177 318 2.9E-29 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMS64_08965 521b0e85f7b7bca73afab889c069139a 356 Pfam PF01699 Sodium/calcium exchanger protein 4 143 1.8E-28 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMS64_08965 521b0e85f7b7bca73afab889c069139a 356 Gene3D G3DSA:1.20.58.1130 8 207 5.7E-90 T 11-10-2018 AMS64_17250 45b6a4d68fa296e0ffeffec6e8ce8c8f 256 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 37 3.9E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_17250 45b6a4d68fa296e0ffeffec6e8ce8c8f 256 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 1.4E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_17250 45b6a4d68fa296e0ffeffec6e8ce8c8f 256 Gene3D G3DSA:3.10.610.10 46 158 2.6E-37 T 11-10-2018 AMS64_17250 45b6a4d68fa296e0ffeffec6e8ce8c8f 256 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_17250 45b6a4d68fa296e0ffeffec6e8ce8c8f 256 Pfam PF11612 Type II secretion system (T2SS), protein J 67 203 2.2E-40 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AMS64_17250 45b6a4d68fa296e0ffeffec6e8ce8c8f 256 Gene3D G3DSA:2.10.70.20 160 209 1.2E-10 T 11-10-2018 AMS64_17250 45b6a4d68fa296e0ffeffec6e8ce8c8f 256 SUPERFAMILY SSF54523 48 205 4.97E-50 T 11-10-2018 AMS64_17250 45b6a4d68fa296e0ffeffec6e8ce8c8f 256 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 15 206 1.3E-96 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AMS64_21540 cf99ff318122f3fb918f9dba4fe78cfc 198 SUPERFAMILY SSF52218 1 179 7.22E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_21540 cf99ff318122f3fb918f9dba4fe78cfc 198 Gene3D G3DSA:3.40.50.360 2 179 8.5E-54 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_21540 cf99ff318122f3fb918f9dba4fe78cfc 198 Pfam PF02525 Flavodoxin-like fold 2 171 2.6E-44 T 11-10-2018 IPR003680 Flavodoxin-like fold AMS64_00605 34a19fd8f83c2c5e586030005c1ec026 258 Gene3D G3DSA:1.10.10.10 179 243 3.3E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_00605 34a19fd8f83c2c5e586030005c1ec026 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 197 1.1E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_00605 34a19fd8f83c2c5e586030005c1ec026 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 213 225 1.1E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_00605 34a19fd8f83c2c5e586030005c1ec026 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 213 1.1E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_00605 34a19fd8f83c2c5e586030005c1ec026 258 SMART SM00421 180 237 2.3E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_00605 34a19fd8f83c2c5e586030005c1ec026 258 Gene3D G3DSA:3.30.450.80 4 176 9.0E-40 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AMS64_00605 34a19fd8f83c2c5e586030005c1ec026 258 Pfam PF00196 Bacterial regulatory proteins, luxR family 183 235 5.9E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_00605 34a19fd8f83c2c5e586030005c1ec026 258 SUPERFAMILY SSF46894 167 243 5.44E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_00605 34a19fd8f83c2c5e586030005c1ec026 258 SUPERFAMILY SSF75516 5 171 4.97E-38 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AMS64_00605 34a19fd8f83c2c5e586030005c1ec026 258 Pfam PF03472 Autoinducer binding domain 19 165 1.6E-31 T 11-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMS64_14975 227bb2cbf561831b9c142e23fad3aa94 422 Gene3D G3DSA:3.50.50.60 7 340 1.5E-119 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_14975 227bb2cbf561831b9c142e23fad3aa94 422 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 392 5.0E-134 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AMS64_14975 227bb2cbf561831b9c142e23fad3aa94 422 SUPERFAMILY SSF51905 4 395 4.95E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_14975 227bb2cbf561831b9c142e23fad3aa94 422 Gene3D G3DSA:3.30.9.50 81 271 1.5E-119 T 11-10-2018 AMS64_14975 227bb2cbf561831b9c142e23fad3aa94 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.9E-19 T 11-10-2018 AMS64_14975 227bb2cbf561831b9c142e23fad3aa94 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 1.9E-19 T 11-10-2018 AMS64_14975 227bb2cbf561831b9c142e23fad3aa94 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.9E-19 T 11-10-2018 AMS64_14975 227bb2cbf561831b9c142e23fad3aa94 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 1.9E-19 T 11-10-2018 AMS64_14975 227bb2cbf561831b9c142e23fad3aa94 422 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 296 309 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AMS64_14975 227bb2cbf561831b9c142e23fad3aa94 422 Pfam PF01494 FAD binding domain 6 347 4.9E-32 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AMS64_13505 0b7b9b3756bf489a201c5017ceb18467 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_13505 0b7b9b3756bf489a201c5017ceb18467 180 SUPERFAMILY SSF54862 25 161 2.51E-20 T 11-10-2018 AMS64_13505 0b7b9b3756bf489a201c5017ceb18467 180 Pfam PF12838 4Fe-4S dicluster domain 112 156 2.5E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_13505 0b7b9b3756bf489a201c5017ceb18467 180 Gene3D G3DSA:3.30.70.20 99 162 4.9E-10 T 11-10-2018 AMS64_13505 0b7b9b3756bf489a201c5017ceb18467 180 Gene3D G3DSA:3.30.70.20 34 86 8.9E-8 T 11-10-2018 AMS64_13505 0b7b9b3756bf489a201c5017ceb18467 180 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 9 158 5.1E-43 T 11-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 AMS64_13505 0b7b9b3756bf489a201c5017ceb18467 180 Pfam PF13187 4Fe-4S dicluster domain 38 82 1.5E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_13505 0b7b9b3756bf489a201c5017ceb18467 180 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 27 164 23.016 T 11-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 AMS64_15310 86f4174f8090c862fda5353e08528ce1 316 Pfam PF01926 50S ribosome-binding GTPase 117 206 1.5E-15 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_15310 86f4174f8090c862fda5353e08528ce1 316 Gene3D G3DSA:3.40.50.300 3 171 1.2E-40 T 11-10-2018 AMS64_15310 86f4174f8090c862fda5353e08528ce1 316 SUPERFAMILY SSF52540 9 254 1.54E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_15310 86f4174f8090c862fda5353e08528ce1 316 PIRSF PIRSF006230 281 315 1500.0 T 11-10-2018 IPR016478 GTPase, MTG1 AMS64_15310 86f4174f8090c862fda5353e08528ce1 316 PIRSF PIRSF006230 1 277 4.9E-96 T 11-10-2018 IPR016478 GTPase, MTG1 AMS64_15310 86f4174f8090c862fda5353e08528ce1 316 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 272 2.3E-101 T 11-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis AMS64_15310 86f4174f8090c862fda5353e08528ce1 316 Gene3D G3DSA:1.10.1580.10 176 265 2.2E-25 T 11-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily AMS64_17865 321c26c0bcc2ff1ef769bb0743f8a21a 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 37 97 3.2E-9 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMS64_17865 321c26c0bcc2ff1ef769bb0743f8a21a 342 SUPERFAMILY SSF51735 121 298 8.29E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_17865 321c26c0bcc2ff1ef769bb0743f8a21a 342 SUPERFAMILY SSF50129 7 155 4.57E-39 T 11-10-2018 IPR011032 GroES-like superfamily AMS64_17865 321c26c0bcc2ff1ef769bb0743f8a21a 342 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 336 8.8E-140 T 11-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AMS64_17865 321c26c0bcc2ff1ef769bb0743f8a21a 342 Pfam PF00107 Zinc-binding dehydrogenase 161 288 2.1E-28 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMS64_17865 321c26c0bcc2ff1ef769bb0743f8a21a 342 Gene3D G3DSA:3.40.50.720 130 273 1.1E-102 T 11-10-2018 AMS64_17865 321c26c0bcc2ff1ef769bb0743f8a21a 342 Gene3D G3DSA:3.90.180.10 23 334 1.1E-102 T 11-10-2018 AMS64_17865 321c26c0bcc2ff1ef769bb0743f8a21a 342 SMART SM00829 20 334 8.2E-57 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMS64_12425 c9d9997fe739f6cbc52ece928ab31d81 500 Gene3D G3DSA:3.30.420.40 254 500 1.4E-91 T 11-10-2018 AMS64_12425 c9d9997fe739f6cbc52ece928ab31d81 500 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMS64_12425 c9d9997fe739f6cbc52ece928ab31d81 500 Hamap MF_00186 Glycerol kinase [glpK]. 5 497 59.408 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMS64_12425 c9d9997fe739f6cbc52ece928ab31d81 500 Gene3D G3DSA:3.30.420.40 3 253 3.8E-111 T 11-10-2018 AMS64_12425 c9d9997fe739f6cbc52ece928ab31d81 500 SUPERFAMILY SSF53067 6 255 8.77E-96 T 11-10-2018 AMS64_12425 c9d9997fe739f6cbc52ece928ab31d81 500 PIRSF PIRSF000538 5 500 9.2E-180 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMS64_12425 c9d9997fe739f6cbc52ece928ab31d81 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 252 1.1E-86 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMS64_12425 c9d9997fe739f6cbc52ece928ab31d81 500 SUPERFAMILY SSF53067 255 496 1.21E-84 T 11-10-2018 AMS64_12425 c9d9997fe739f6cbc52ece928ab31d81 500 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 496 6.4E-229 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMS64_12425 c9d9997fe739f6cbc52ece928ab31d81 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 450 1.3E-60 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMS64_12425 c9d9997fe739f6cbc52ece928ab31d81 500 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 137 149 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 PIRSF PIRSF019574 3 361 8.7E-138 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 Gene3D G3DSA:3.40.190.10 25 329 1.6E-132 T 11-10-2018 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 Gene3D G3DSA:3.40.190.10 129 355 1.6E-132 T 11-10-2018 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 SUPERFAMILY SSF53850 24 360 5.43E-98 T 11-10-2018 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 87 100 8.0E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 260 279 8.0E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 71 85 8.0E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 150 164 8.0E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 44 65 8.0E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 210 229 8.0E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 8.0E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 173 192 8.0E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 305 331 8.0E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 28 44 8.0E-63 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01700 faec335a8ff33ca4550f86f00caa0079 361 Pfam PF13416 Bacterial extracellular solute-binding protein 40 323 2.3E-30 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMS64_06515 87cb762c43535acddde5b33e3aad2569 227 Gene3D G3DSA:3.20.20.190 1 226 1.2E-66 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMS64_06515 87cb762c43535acddde5b33e3aad2569 227 SUPERFAMILY SSF51695 2 225 8.11E-62 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMS64_06515 87cb762c43535acddde5b33e3aad2569 227 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 222 1.6E-32 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMS64_10510 0d18b4769fe6a2ca4bfebcfc7b4069fc 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.2E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_10510 0d18b4769fe6a2ca4bfebcfc7b4069fc 294 Gene3D G3DSA:3.40.190.290 94 294 1.3E-49 T 11-10-2018 AMS64_10510 0d18b4769fe6a2ca4bfebcfc7b4069fc 294 Gene3D G3DSA:1.10.10.10 6 92 2.9E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_10510 0d18b4769fe6a2ca4bfebcfc7b4069fc 294 SUPERFAMILY SSF46785 6 91 1.58E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_10510 0d18b4769fe6a2ca4bfebcfc7b4069fc 294 SUPERFAMILY SSF53850 92 293 1.99E-42 T 11-10-2018 AMS64_10510 0d18b4769fe6a2ca4bfebcfc7b4069fc 294 Pfam PF03466 LysR substrate binding domain 91 293 2.5E-38 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_10510 0d18b4769fe6a2ca4bfebcfc7b4069fc 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_10510 0d18b4769fe6a2ca4bfebcfc7b4069fc 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_10510 0d18b4769fe6a2ca4bfebcfc7b4069fc 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_00285 a4ab2b2ef3025ee9ca735a803a50b0e9 271 Gene3D G3DSA:3.40.50.1000 3 260 7.4E-77 T 11-10-2018 IPR023214 HAD superfamily AMS64_00285 a4ab2b2ef3025ee9ca735a803a50b0e9 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 230 8.5E-35 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AMS64_00285 a4ab2b2ef3025ee9ca735a803a50b0e9 271 Gene3D G3DSA:3.30.1240.10 82 186 7.4E-77 T 11-10-2018 AMS64_00285 a4ab2b2ef3025ee9ca735a803a50b0e9 271 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 11-10-2018 AMS64_00285 a4ab2b2ef3025ee9ca735a803a50b0e9 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 259 2.6E-67 T 11-10-2018 IPR000150 Cof family GO:0016787 AMS64_00285 a4ab2b2ef3025ee9ca735a803a50b0e9 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 259 1.6E-69 T 11-10-2018 AMS64_00285 a4ab2b2ef3025ee9ca735a803a50b0e9 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 211 233 - T 11-10-2018 AMS64_00285 a4ab2b2ef3025ee9ca735a803a50b0e9 271 SUPERFAMILY SSF56784 1 263 1.65E-76 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_02850 7c1e33ef3f10dcf54bb7ea0af95acde5 634 SUPERFAMILY SSF63520 292 391 4.05E-18 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 AMS64_02850 7c1e33ef3f10dcf54bb7ea0af95acde5 634 Pfam PF00874 PRD domain 299 386 2.8E-15 T 11-10-2018 IPR011608 PRD domain GO:0006355 AMS64_02850 7c1e33ef3f10dcf54bb7ea0af95acde5 634 SUPERFAMILY SSF55804 490 628 2.79E-23 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_02850 7c1e33ef3f10dcf54bb7ea0af95acde5 634 SUPERFAMILY SSF46785 5 65 1.24E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_02850 7c1e33ef3f10dcf54bb7ea0af95acde5 634 Gene3D G3DSA:3.40.930.10 494 631 8.7E-15 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_02850 7c1e33ef3f10dcf54bb7ea0af95acde5 634 Pfam PF08279 HTH domain 8 64 4.9E-11 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 AMS64_02850 7c1e33ef3f10dcf54bb7ea0af95acde5 634 Gene3D G3DSA:1.10.1790.10 292 389 2.0E-13 T 11-10-2018 AMS64_02850 7c1e33ef3f10dcf54bb7ea0af95acde5 634 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 500 627 1.2E-16 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMS64_02850 7c1e33ef3f10dcf54bb7ea0af95acde5 634 Pfam PF05043 Mga helix-turn-helix domain 98 166 3.3E-7 T 11-10-2018 IPR007737 Mga helix-turn-helix domain AMS64_02850 7c1e33ef3f10dcf54bb7ea0af95acde5 634 Gene3D G3DSA:1.10.10.10 5 66 2.0E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_01290 2c6344ac3e31ae8ca777f4be145f9603 69 Gene3D G3DSA:1.20.5.340 1 65 1.5E-23 T 11-10-2018 AMS64_01290 2c6344ac3e31ae8ca777f4be145f9603 69 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 65 17.497 T 11-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AMS64_01290 2c6344ac3e31ae8ca777f4be145f9603 69 Pfam PF06005 Cell division protein ZapB 1 64 2.9E-23 T 11-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AMS64_14870 fd54840a6936c6bf2d555cb1c780710c 517 Pfam PF08447 PAS fold 32 115 2.1E-19 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AMS64_14870 fd54840a6936c6bf2d555cb1c780710c 517 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 484 2.3E-37 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_14870 fd54840a6936c6bf2d555cb1c780710c 517 SMART SM00091 9 76 0.0058 T 11-10-2018 IPR000014 PAS domain AMS64_14870 fd54840a6936c6bf2d555cb1c780710c 517 SMART SM00283 256 517 1.2E-47 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_14870 fd54840a6936c6bf2d555cb1c780710c 517 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 114 2.9E-15 T 11-10-2018 IPR000014 PAS domain AMS64_14870 fd54840a6936c6bf2d555cb1c780710c 517 SUPERFAMILY SSF55785 22 115 1.66E-29 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_14870 fd54840a6936c6bf2d555cb1c780710c 517 Gene3D G3DSA:3.30.450.20 16 149 1.3E-28 T 11-10-2018 AMS64_14870 fd54840a6936c6bf2d555cb1c780710c 517 SUPERFAMILY SSF58104 245 516 7.46E-69 T 11-10-2018 AMS64_14870 fd54840a6936c6bf2d555cb1c780710c 517 Gene3D G3DSA:1.10.287.950 199 517 2.7E-59 T 11-10-2018 AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 Gene3D G3DSA:1.10.287.130 77 193 3.5E-22 T 11-10-2018 AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 SUPERFAMILY SSF47384 117 199 1.51E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 Gene3D G3DSA:3.30.565.10 197 356 1.4E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 307 7.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 7.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 351 7.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 332 7.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 SMART SM00387 243 354 1.2E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 351 6.5E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 SMART SM00304 79 133 5.8E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 SMART SM00388 134 198 2.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 SUPERFAMILY SSF55874 187 352 1.7E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 198 1.3E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 SUPERFAMILY SSF158472 79 131 5.36E-7 T 11-10-2018 AMS64_13140 bfdbf06b539b59b6f468fdb773c312ed 361 Pfam PF00672 HAMP domain 79 129 4.3E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 SUPERFAMILY SSF141868 570 820 1.28E-88 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 Pfam PF13426 PAS domain 279 376 5.2E-11 T 11-10-2018 IPR000014 PAS domain AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 SUPERFAMILY SSF55785 279 385 4.19E-19 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 Pfam PF00990 Diguanylate cyclase, GGDEF domain 388 549 2.9E-48 T 11-10-2018 IPR000160 GGDEF domain AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 SMART SM00267 377 554 5.8E-64 T 11-10-2018 IPR000160 GGDEF domain AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 SUPERFAMILY SSF55781 137 269 2.16E-7 T 11-10-2018 AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 SUPERFAMILY SSF55073 393 555 9.42E-49 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 SMART SM00052 564 810 1.9E-113 T 11-10-2018 IPR001633 EAL domain AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 Gene3D G3DSA:3.30.70.270 386 567 6.3E-62 T 11-10-2018 AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 Gene3D G3DSA:3.30.450.20 265 385 3.0E-20 T 11-10-2018 AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 385 551 1.1E-42 T 11-10-2018 IPR000160 GGDEF domain AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 Pfam PF00563 EAL domain 570 805 2.0E-73 T 11-10-2018 IPR001633 EAL domain AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 269 383 4.1E-13 T 11-10-2018 IPR000014 PAS domain AMS64_15980 8d81cde0fd74adcdcd0eacc771c65182 834 Gene3D G3DSA:3.20.20.450 568 817 9.5E-101 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_00795 3e53fca0b943dbcc69bb3839c7489264 303 SMART SM00267 134 301 1.7E-44 T 11-10-2018 IPR000160 GGDEF domain AMS64_00795 3e53fca0b943dbcc69bb3839c7489264 303 SUPERFAMILY SSF55073 150 300 1.41E-36 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_00795 3e53fca0b943dbcc69bb3839c7489264 303 Pfam PF08447 PAS fold 48 127 4.6E-15 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AMS64_00795 3e53fca0b943dbcc69bb3839c7489264 303 SMART SM00086 91 134 7.4E-6 T 11-10-2018 IPR001610 PAC motif AMS64_00795 3e53fca0b943dbcc69bb3839c7489264 303 SUPERFAMILY SSF55785 51 135 1.71E-13 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_00795 3e53fca0b943dbcc69bb3839c7489264 303 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 142 299 3.6E-32 T 11-10-2018 IPR000160 GGDEF domain AMS64_00795 3e53fca0b943dbcc69bb3839c7489264 303 Gene3D G3DSA:3.30.450.20 31 135 2.8E-19 T 11-10-2018 AMS64_00795 3e53fca0b943dbcc69bb3839c7489264 303 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 67 141 5.6E-6 T 11-10-2018 IPR000014 PAS domain AMS64_00795 3e53fca0b943dbcc69bb3839c7489264 303 Gene3D G3DSA:3.30.70.270 136 301 1.9E-41 T 11-10-2018 AMS64_00795 3e53fca0b943dbcc69bb3839c7489264 303 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 295 4.5E-34 T 11-10-2018 IPR000160 GGDEF domain AMS64_11645 c660a877aadfe34755919ae16c809945 107 SUPERFAMILY SSF89360 1 96 3.66E-33 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMS64_11645 c660a877aadfe34755919ae16c809945 107 Gene3D G3DSA:2.60.300.12 2 107 7.2E-38 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMS64_11645 c660a877aadfe34755919ae16c809945 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 37.29 T 11-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AMS64_11645 c660a877aadfe34755919ae16c809945 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.1E-25 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AMS64_11645 c660a877aadfe34755919ae16c809945 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AMS64_11645 c660a877aadfe34755919ae16c809945 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.5E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AMS64_11645 c660a877aadfe34755919ae16c809945 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.3E-58 T 11-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AMS64_21335 0ce164b6584fa9f9db59ae8783ea1b7d 489 Gene3D G3DSA:3.40.1260.20 402 489 4.4E-10 T 11-10-2018 AMS64_21335 0ce164b6584fa9f9db59ae8783ea1b7d 489 Pfam PF10150 Ribonuclease E/G family 124 393 3.9E-103 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AMS64_21335 0ce164b6584fa9f9db59ae8783ea1b7d 489 Gene3D G3DSA:2.40.50.140 31 127 3.6E-31 T 11-10-2018 AMS64_21335 0ce164b6584fa9f9db59ae8783ea1b7d 489 SUPERFAMILY SSF50249 39 128 8.58E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_21335 0ce164b6584fa9f9db59ae8783ea1b7d 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 7.4E-172 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AMS64_21335 0ce164b6584fa9f9db59ae8783ea1b7d 489 Pfam PF00575 S1 RNA binding domain 38 109 2.2E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMS64_21335 0ce164b6584fa9f9db59ae8783ea1b7d 489 SMART SM00316 37 122 3.4E-8 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_19135 0c0259c86f821f12c3ec2c5ded7dcaf6 337 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 1.5E-24 T 11-10-2018 AMS64_19135 0c0259c86f821f12c3ec2c5ded7dcaf6 337 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.5E-24 T 11-10-2018 AMS64_19135 0c0259c86f821f12c3ec2c5ded7dcaf6 337 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.5E-24 T 11-10-2018 AMS64_19135 0c0259c86f821f12c3ec2c5ded7dcaf6 337 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.5E-24 T 11-10-2018 AMS64_19135 0c0259c86f821f12c3ec2c5ded7dcaf6 337 Gene3D G3DSA:3.40.50.720 3 334 1.1E-93 T 11-10-2018 AMS64_19135 0c0259c86f821f12c3ec2c5ded7dcaf6 337 SUPERFAMILY SSF51735 1 333 2.72E-89 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_19135 0c0259c86f821f12c3ec2c5ded7dcaf6 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 237 8.2E-56 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 SUPERFAMILY SSF81624 2 139 3.79E-38 T 11-10-2018 IPR035937 MutM-like, N-terminal AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 1.8E-88 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 Gene3D G3DSA:1.10.8.50 132 270 8.8E-46 T 11-10-2018 AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 7.0E-5 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 42.134 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 Gene3D G3DSA:3.20.190.10 2 128 2.0E-36 T 11-10-2018 IPR035937 MutM-like, N-terminal AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 5.8E-27 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 SMART SM01232 130 222 4.6E-49 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 113 1.3E-26 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 SMART SM00898 2 115 2.2E-46 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 SUPERFAMILY SSF46946 131 222 1.18E-30 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMS64_01175 2bd73bdae0232909c4773343e61264b4 270 SUPERFAMILY SSF57716 218 269 2.85E-15 T 11-10-2018 AMS64_03715 650898cd49fb6f609fecae70e67c2178 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 2.2E-26 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AMS64_03715 650898cd49fb6f609fecae70e67c2178 269 Gene3D G3DSA:3.30.1240.10 86 191 2.5E-85 T 11-10-2018 AMS64_03715 650898cd49fb6f609fecae70e67c2178 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 6.2E-63 T 11-10-2018 IPR000150 Cof family GO:0016787 AMS64_03715 650898cd49fb6f609fecae70e67c2178 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 11-10-2018 AMS64_03715 650898cd49fb6f609fecae70e67c2178 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 3.4E-67 T 11-10-2018 AMS64_03715 650898cd49fb6f609fecae70e67c2178 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 11-10-2018 AMS64_03715 650898cd49fb6f609fecae70e67c2178 269 SUPERFAMILY SSF56784 1 267 8.8E-77 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_03715 650898cd49fb6f609fecae70e67c2178 269 Gene3D G3DSA:3.40.50.1000 3 263 2.5E-85 T 11-10-2018 IPR023214 HAD superfamily AMS64_21015 e99bb4151ad1934b0b1104624857f838 633 Gene3D G3DSA:1.10.10.60 580 622 8.1E-14 T 11-10-2018 AMS64_21015 e99bb4151ad1934b0b1104624857f838 633 Gene3D G3DSA:1.10.8.60 494 569 4.7E-15 T 11-10-2018 AMS64_21015 e99bb4151ad1934b0b1104624857f838 633 SUPERFAMILY SSF55785 194 305 3.49E-9 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_21015 e99bb4151ad1934b0b1104624857f838 633 Gene3D G3DSA:3.30.450.20 212 316 3.9E-16 T 11-10-2018 AMS64_21015 e99bb4151ad1934b0b1104624857f838 633 Pfam PF02954 Bacterial regulatory protein, Fis family 583 622 2.2E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_21015 e99bb4151ad1934b0b1104624857f838 633 Gene3D G3DSA:3.40.50.300 317 493 8.9E-41 T 11-10-2018 AMS64_21015 e99bb4151ad1934b0b1104624857f838 633 Gene3D G3DSA:3.30.450.40 9 189 6.1E-50 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_21015 e99bb4151ad1934b0b1104624857f838 633 SUPERFAMILY SSF46689 533 626 6.72E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_21015 e99bb4151ad1934b0b1104624857f838 633 Pfam PF00158 Sigma-54 interaction domain 328 489 6.3E-33 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_21015 e99bb4151ad1934b0b1104624857f838 633 SMART SM00091 202 269 1.4E-4 T 11-10-2018 IPR000014 PAS domain AMS64_21015 e99bb4151ad1934b0b1104624857f838 633 Pfam PF00989 PAS fold 203 309 3.3E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 AMS64_21015 e99bb4151ad1934b0b1104624857f838 633 SUPERFAMILY SSF52540 328 564 1.29E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 SUPERFAMILY SSF56059 2 383 9.89E-108 T 11-10-2018 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 480 777 2.4E-60 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 779 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 342 1.1E-115 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 Gene3D G3DSA:3.30.1490.20 1 191 8.0E-72 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 692 710 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 Gene3D G3DSA:3.50.30.10 358 475 3.7E-41 T 11-10-2018 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 SUPERFAMILY SSF52009 347 464 3.66E-34 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 412 423 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 Pfam PF00391 PEP-utilising enzyme, mobile domain 382 453 3.2E-26 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 Gene3D G3DSA:3.30.470.20 192 355 2.4E-59 T 11-10-2018 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 Gene3D G3DSA:3.20.20.60 476 779 6.9E-103 T 11-10-2018 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 SUPERFAMILY SSF51621 460 778 9.16E-97 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMS64_14835 3321e88b40549a90f69a1e69f82b8fdd 779 PIRSF PIRSF000854 1 779 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AMS64_17790 432c4f59edf1ce59b9dacbef33183606 239 Gene3D G3DSA:3.40.190.10 104 204 3.2E-18 T 11-10-2018 AMS64_17790 432c4f59edf1ce59b9dacbef33183606 239 SUPERFAMILY SSF53850 25 231 6.01E-25 T 11-10-2018 AMS64_17790 432c4f59edf1ce59b9dacbef33183606 239 Gene3D G3DSA:3.40.190.10 27 231 3.2E-18 T 11-10-2018 AMS64_17790 432c4f59edf1ce59b9dacbef33183606 239 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 94 230 3.6E-15 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_06920 14893a5d20e558dc366cd75ac62cd601 335 Pfam PF01343 Peptidase family S49 149 296 1.5E-43 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMS64_06920 14893a5d20e558dc366cd75ac62cd601 335 Gene3D G3DSA:3.90.226.10 124 289 2.1E-40 T 11-10-2018 AMS64_06920 14893a5d20e558dc366cd75ac62cd601 335 SUPERFAMILY SSF52096 91 287 3.25E-28 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_06920 14893a5d20e558dc366cd75ac62cd601 335 Pfam PF08496 Peptidase family S49 N-terminal 3 146 7.2E-52 T 11-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AMS64_06920 14893a5d20e558dc366cd75ac62cd601 335 Gene3D G3DSA:3.40.1750.20 190 254 2.1E-40 T 11-10-2018 AMS64_04825 2633a24944ad1ee0b381f70760af9920 169 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_04825 2633a24944ad1ee0b381f70760af9920 169 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 4.4E-36 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_04825 2633a24944ad1ee0b381f70760af9920 169 Gene3D G3DSA:3.30.70.560 1 159 1.6E-56 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_04825 2633a24944ad1ee0b381f70760af9920 169 SUPERFAMILY SSF55083 1 157 7.59E-54 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_04825 2633a24944ad1ee0b381f70760af9920 169 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 3.5E-43 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_21485 55d360206452a69340b3922291b3a8ad 234 SUPERFAMILY SSF46785 4 72 4.16E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_21485 55d360206452a69340b3922291b3a8ad 234 Gene3D G3DSA:1.10.10.10 2 69 6.9E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_21485 55d360206452a69340b3922291b3a8ad 234 SMART SM00866 89 226 6.4E-35 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMS64_21485 55d360206452a69340b3922291b3a8ad 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 6.1E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_21485 55d360206452a69340b3922291b3a8ad 234 SUPERFAMILY SSF64288 56 229 5.97E-42 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMS64_21485 55d360206452a69340b3922291b3a8ad 234 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 5 231 4.7E-86 T 11-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 AMS64_21485 55d360206452a69340b3922291b3a8ad 234 Pfam PF07702 UTRA domain 90 226 1.7E-34 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMS64_21485 55d360206452a69340b3922291b3a8ad 234 Gene3D G3DSA:3.40.1410.10 86 222 1.1E-33 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMS64_21485 55d360206452a69340b3922291b3a8ad 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.1E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_21485 55d360206452a69340b3922291b3a8ad 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.1E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_21485 55d360206452a69340b3922291b3a8ad 234 SMART SM00345 9 68 9.1E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_15750 1942f6b76f3b6c87d95ab1ea17ea0031 447 SUPERFAMILY SSF161093 273 443 1.12E-46 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AMS64_15750 1942f6b76f3b6c87d95ab1ea17ea0031 447 SMART SM00924 27 130 1.1E-9 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AMS64_15750 1942f6b76f3b6c87d95ab1ea17ea0031 447 Gene3D G3DSA:3.10.580.10 127 252 7.8E-28 T 11-10-2018 AMS64_15750 1942f6b76f3b6c87d95ab1ea17ea0031 447 Pfam PF00571 CBS domain 194 246 0.0077 T 11-10-2018 IPR000644 CBS domain AMS64_15750 1942f6b76f3b6c87d95ab1ea17ea0031 447 Pfam PF00571 CBS domain 134 188 8.3E-6 T 11-10-2018 IPR000644 CBS domain AMS64_15750 1942f6b76f3b6c87d95ab1ea17ea0031 447 SMART SM00116 137 190 20.0 T 11-10-2018 IPR000644 CBS domain AMS64_15750 1942f6b76f3b6c87d95ab1ea17ea0031 447 SMART SM00116 201 248 0.0082 T 11-10-2018 IPR000644 CBS domain AMS64_15750 1942f6b76f3b6c87d95ab1ea17ea0031 447 Gene3D G3DSA:1.10.357.20 267 443 1.4E-51 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AMS64_15750 1942f6b76f3b6c87d95ab1ea17ea0031 447 TIGRFAM TIGR00400 mgtE: magnesium transporter 26 443 5.0E-79 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AMS64_15750 1942f6b76f3b6c87d95ab1ea17ea0031 447 Pfam PF01769 Divalent cation transporter 315 436 8.4E-26 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMS64_15750 1942f6b76f3b6c87d95ab1ea17ea0031 447 SUPERFAMILY SSF158791 25 124 1.7E-8 T 11-10-2018 AMS64_15750 1942f6b76f3b6c87d95ab1ea17ea0031 447 SUPERFAMILY SSF54631 130 267 1.06E-22 T 11-10-2018 AMS64_18525 a4edab88642c923200de955ba101a5e7 147 SUPERFAMILY SSF51306 13 135 6.45E-30 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMS64_18525 a4edab88642c923200de955ba101a5e7 147 Gene3D G3DSA:2.10.109.10 25 139 7.8E-42 T 11-10-2018 AMS64_18525 a4edab88642c923200de955ba101a5e7 147 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 1.0E-7 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMS64_18525 a4edab88642c923200de955ba101a5e7 147 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 1.0E-7 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMS64_18525 a4edab88642c923200de955ba101a5e7 147 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 1.0E-7 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMS64_18525 a4edab88642c923200de955ba101a5e7 147 Pfam PF00717 Peptidase S24-like 56 113 1.6E-11 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMS64_08425 90104b35e023cdb3b8bd9a7684a4b049 292 Gene3D G3DSA:1.10.10.60 185 243 3.9E-17 T 11-10-2018 AMS64_08425 90104b35e023cdb3b8bd9a7684a4b049 292 SUPERFAMILY SSF46689 237 286 1.12E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_08425 90104b35e023cdb3b8bd9a7684a4b049 292 Pfam PF12833 Helix-turn-helix domain 207 284 2.9E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_08425 90104b35e023cdb3b8bd9a7684a4b049 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 279 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_08425 90104b35e023cdb3b8bd9a7684a4b049 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 283 1.9E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_08425 90104b35e023cdb3b8bd9a7684a4b049 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 267 1.9E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_08425 90104b35e023cdb3b8bd9a7684a4b049 292 SMART SM00342 201 283 1.1E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_08425 90104b35e023cdb3b8bd9a7684a4b049 292 SUPERFAMILY SSF46689 186 234 3.29E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_08425 90104b35e023cdb3b8bd9a7684a4b049 292 Gene3D G3DSA:1.10.10.60 244 292 8.8E-14 T 11-10-2018 AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 Gene3D G3DSA:3.20.20.450 584 843 2.4E-88 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 SMART SM00086 366 407 7.3 T 11-10-2018 IPR001610 PAC motif AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 SMART SM00086 244 286 2.9E-6 T 11-10-2018 IPR001610 PAC motif AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 Gene3D G3DSA:3.30.450.20 170 297 1.9E-23 T 11-10-2018 AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 SMART SM00267 407 575 1.9E-41 T 11-10-2018 IPR000160 GGDEF domain AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 415 569 5.6E-30 T 11-10-2018 IPR000160 GGDEF domain AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 Gene3D G3DSA:3.30.450.20 298 422 1.6E-32 T 11-10-2018 AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 SMART SM00091 294 364 4.0E-7 T 11-10-2018 IPR000014 PAS domain AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 SMART SM00091 171 237 6.5E-12 T 11-10-2018 IPR000014 PAS domain AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 SUPERFAMILY SSF55781 24 158 9.32E-9 T 11-10-2018 AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 Gene3D G3DSA:3.30.70.270 423 583 4.7E-44 T 11-10-2018 AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 SUPERFAMILY SSF55785 302 403 9.35E-25 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 SUPERFAMILY SSF55785 179 288 2.51E-23 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 Pfam PF00563 EAL domain 590 826 1.4E-69 T 11-10-2018 IPR001633 EAL domain AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 SMART SM00052 584 831 2.5E-92 T 11-10-2018 IPR001633 EAL domain AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 SUPERFAMILY SSF141868 590 836 6.28E-82 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 173 293 2.4E-21 T 11-10-2018 IPR000014 PAS domain AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 297 413 1.1E-19 T 11-10-2018 IPR000014 PAS domain AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 Pfam PF13426 PAS domain 305 406 2.3E-16 T 11-10-2018 IPR000014 PAS domain AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 SUPERFAMILY SSF55073 423 569 3.92E-40 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 Pfam PF08447 PAS fold 194 276 4.9E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AMS64_00740 8c8c6fa1f39b0062b20973328abe3bf1 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 418 569 2.1E-36 T 11-10-2018 IPR000160 GGDEF domain AMS64_06540 04369373c8f4cd40ed3cb2aea13dde12 299 SUPERFAMILY SSF53850 90 294 2.17E-42 T 11-10-2018 AMS64_06540 04369373c8f4cd40ed3cb2aea13dde12 299 Gene3D G3DSA:3.40.190.10 92 287 2.2E-60 T 11-10-2018 AMS64_06540 04369373c8f4cd40ed3cb2aea13dde12 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 9.1E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06540 04369373c8f4cd40ed3cb2aea13dde12 299 Gene3D G3DSA:1.10.10.10 3 91 3.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_06540 04369373c8f4cd40ed3cb2aea13dde12 299 SUPERFAMILY SSF46785 4 84 1.72E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_06540 04369373c8f4cd40ed3cb2aea13dde12 299 Pfam PF03466 LysR substrate binding domain 89 291 2.4E-38 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_06540 04369373c8f4cd40ed3cb2aea13dde12 299 Gene3D G3DSA:3.40.190.10 163 262 2.2E-60 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Gene3D G3DSA:3.40.228.10 831 1032 8.8E-183 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 PRINTS PR00419 Adrenodoxin reductase family signature 356 369 2.2E-15 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 PRINTS PR00419 Adrenodoxin reductase family signature 323 337 2.2E-15 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 PRINTS PR00419 Adrenodoxin reductase family signature 192 214 2.2E-15 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 PRINTS PR00419 Adrenodoxin reductase family signature 215 228 2.2E-15 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Gene3D G3DSA:2.40.40.20 1252 1373 2.6E-42 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 665 676 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 697 749 4.6E-18 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 699 1370 4.9E-246 T 11-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 699 716 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 SUPERFAMILY SSF46548 88 200 8.37E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Gene3D G3DSA:3.10.20.740 1 119 1.2E-26 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 SUPERFAMILY SSF53706 695 1230 1.01E-206 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 96 174 9.2E-18 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Pfam PF01568 Molydopterin dinucleotide binding domain 1263 1366 1.3E-30 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Gene3D G3DSA:3.40.50.740 758 1221 8.8E-183 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Pfam PF12838 4Fe-4S dicluster domain 618 679 8.8E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 148 169 - T 11-10-2018 IPR013087 Zinc finger C2H2-type GO:0003676 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Gene3D G3DSA:2.20.25.90 694 750 2.6E-20 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1125 1142 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 SUPERFAMILY SSF54862 565 684 1.5E-24 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 75 4.3E-12 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 191 488 2.7E-29 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 SUPERFAMILY SSF50692 1218 1372 5.42E-43 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Gene3D G3DSA:3.50.50.60 188 306 1.5E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Gene3D G3DSA:3.50.50.60 318 521 1.0E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 SUPERFAMILY SSF54292 1 98 3.3E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 SUPERFAMILY SSF51971 190 430 5.89E-59 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Gene3D G3DSA:3.30.70.20 597 683 2.1E-19 T 11-10-2018 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1300 1327 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 Pfam PF00384 Molybdopterin oxidoreductase 753 1179 2.1E-97 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_13660 2ee6247208799a39f1bceff741397e5b 1396 SMART SM00926 694 750 3.9E-21 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_09460 00cc92463d9f61a5c4439a5596adfc65 228 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 10 218 5.9E-52 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain AMS64_07590 02963ce5bcb8588fcdf15b0f64709f13 368 SUPERFAMILY SSF52402 8 245 5.73E-55 T 11-10-2018 AMS64_07590 02963ce5bcb8588fcdf15b0f64709f13 368 Gene3D G3DSA:2.40.30.10 282 367 1.2E-32 T 11-10-2018 AMS64_07590 02963ce5bcb8588fcdf15b0f64709f13 368 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 8 360 3.1E-155 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AMS64_07590 02963ce5bcb8588fcdf15b0f64709f13 368 Gene3D G3DSA:2.30.30.280 214 281 1.6E-26 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AMS64_07590 02963ce5bcb8588fcdf15b0f64709f13 368 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 361 40.419 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AMS64_07590 02963ce5bcb8588fcdf15b0f64709f13 368 Gene3D G3DSA:3.40.50.620 1 213 2.2E-96 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_07590 02963ce5bcb8588fcdf15b0f64709f13 368 Pfam PF03054 tRNA methyl transferase 8 360 1.3E-141 T 11-10-2018 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 513 2.7E-243 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 Gene3D G3DSA:3.50.50.60 211 503 2.6E-107 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 339 359 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 211 485 4.2E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 Pfam PF13192 Thioredoxin domain 123 193 1.1E-9 T 11-10-2018 IPR012336 Thioredoxin-like fold AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 351 369 8.1E-39 T 11-10-2018 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 436 452 8.1E-39 T 11-10-2018 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 213 232 8.1E-39 T 11-10-2018 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 309 327 8.1E-39 T 11-10-2018 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 463 485 8.1E-39 T 11-10-2018 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 SUPERFAMILY SSF52833 1 99 3.13E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 Gene3D G3DSA:3.50.50.60 321 444 2.6E-107 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 Gene3D G3DSA:3.40.30.80 1 198 2.8E-60 T 11-10-2018 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 347 371 2.3E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 438 459 2.3E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 310 318 2.3E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 212 234 2.3E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 399 415 2.3E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 332 344 2.3E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 244 259 2.3E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 264 274 2.3E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 473 491 2.3E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 SUPERFAMILY SSF52833 103 195 1.28E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 SUPERFAMILY SSF51905 199 509 2.81E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_11735 e0b141b3fc99f9359dedc66eac068db9 526 PIRSF PIRSF000238 1 516 5.0E-255 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AMS64_00480 6ae969230bff15b4506e97b30bf606bd 254 Pfam PF00005 ABC transporter 21 165 1.3E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_00480 6ae969230bff15b4506e97b30bf606bd 254 Gene3D G3DSA:3.40.50.300 1 253 5.0E-62 T 11-10-2018 AMS64_00480 6ae969230bff15b4506e97b30bf606bd 254 SMART SM00382 26 214 2.4E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_00480 6ae969230bff15b4506e97b30bf606bd 254 SUPERFAMILY SSF52540 2 229 1.59E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00680 7eb8586b4d0eadeef570f31f6335da7d 250 Pfam PF01209 ubiE/COQ5 methyltransferase family 19 249 3.3E-102 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMS64_00680 7eb8586b4d0eadeef570f31f6335da7d 250 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 15 249 39.062 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMS64_00680 7eb8586b4d0eadeef570f31f6335da7d 250 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 35 50 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AMS64_00680 7eb8586b4d0eadeef570f31f6335da7d 250 SUPERFAMILY SSF53335 20 248 3.87E-49 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_00680 7eb8586b4d0eadeef570f31f6335da7d 250 Gene3D G3DSA:3.40.50.150 30 250 1.5E-75 T 11-10-2018 AMS64_00680 7eb8586b4d0eadeef570f31f6335da7d 250 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 24 249 2.0E-87 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMS64_00680 7eb8586b4d0eadeef570f31f6335da7d 250 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 157 171 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AMS64_15965 876b2c9bbad1a086adcc54f529030ab5 354 SUPERFAMILY SSF51569 10 345 9.84E-119 T 11-10-2018 AMS64_15965 876b2c9bbad1a086adcc54f529030ab5 354 PIRSF PIRSF001361 4 349 1.2E-139 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMS64_15965 876b2c9bbad1a086adcc54f529030ab5 354 Pfam PF00793 DAHP synthetase I family 40 334 2.1E-87 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMS64_15965 876b2c9bbad1a086adcc54f529030ab5 354 Gene3D G3DSA:3.20.20.70 4 347 7.2E-138 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_15965 876b2c9bbad1a086adcc54f529030ab5 354 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 11 346 7.5E-139 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMS64_17265 5d977d46100cf4ebf73e944145871c6f 163 Pfam PF04612 Type II secretion system (T2SS), protein M 2 161 1.5E-48 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AMS64_17265 5d977d46100cf4ebf73e944145871c6f 163 PIRSF PIRSF006291 1 161 1.3E-45 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AMS64_17265 5d977d46100cf4ebf73e944145871c6f 163 SUPERFAMILY SSF103054 84 161 9.15E-21 T 11-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily AMS64_17265 5d977d46100cf4ebf73e944145871c6f 163 Gene3D G3DSA:3.30.1360.100 84 163 2.3E-25 T 11-10-2018 AMS64_17695 ae16f91fd9b31db5f327e8b76b09b6b4 703 Pfam PF00128 Alpha amylase, catalytic domain 247 622 3.2E-45 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_17695 ae16f91fd9b31db5f327e8b76b09b6b4 703 PIRSF PIRSF036917 12 702 3.3E-272 T 11-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 AMS64_17695 ae16f91fd9b31db5f327e8b76b09b6b4 703 Gene3D G3DSA:3.20.20.80 444 671 1.9E-33 T 11-10-2018 AMS64_17695 ae16f91fd9b31db5f327e8b76b09b6b4 703 SUPERFAMILY SSF51445 202 673 1.26E-78 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_17695 ae16f91fd9b31db5f327e8b76b09b6b4 703 Gene3D G3DSA:3.20.20.80 198 429 3.6E-57 T 11-10-2018 AMS64_17695 ae16f91fd9b31db5f327e8b76b09b6b4 703 SMART SM00642 214 664 2.9E-73 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_03095 23c02fdb302a01ef4bf2bfbf38533b59 235 Gene3D G3DSA:2.60.40.4070 118 197 1.7E-20 T 11-10-2018 AMS64_03095 23c02fdb302a01ef4bf2bfbf38533b59 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 26 89 3.5E-19 T 11-10-2018 IPR005648 Flagellar hook capping protein AMS64_03095 23c02fdb302a01ef4bf2bfbf38533b59 235 Gene3D G3DSA:2.30.30.910 108 225 1.7E-20 T 11-10-2018 AMS64_03095 23c02fdb302a01ef4bf2bfbf38533b59 235 Pfam PF13861 FlgD Tudor-like domain 101 226 1.3E-8 T 11-10-2018 IPR025963 FlgD Tudor-like domain AMS64_03095 23c02fdb302a01ef4bf2bfbf38533b59 235 Pfam PF13860 FlgD Ig-like domain 120 187 8.9E-8 T 11-10-2018 IPR025965 FlgD Ig-like domain AMS64_15475 fbc99f2f8e0e0eedb4356cac7897e238 538 SUPERFAMILY SSF69255 250 342 3.14E-11 T 11-10-2018 AMS64_22165 fbc99f2f8e0e0eedb4356cac7897e238 538 SUPERFAMILY SSF69255 250 342 3.14E-11 T 11-10-2018 AMS64_14280 b2f42f30e27fd025675a9db0946f01f1 388 Pfam PF13176 Tetratricopeptide repeat 71 97 0.028 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_14280 b2f42f30e27fd025675a9db0946f01f1 388 Pfam PF14559 Tetratricopeptide repeat 190 245 8.3E-7 T 11-10-2018 AMS64_14280 b2f42f30e27fd025675a9db0946f01f1 388 SMART SM00028 69 102 43.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_14280 b2f42f30e27fd025675a9db0946f01f1 388 SMART SM00028 35 68 190.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_14280 b2f42f30e27fd025675a9db0946f01f1 388 SMART SM00028 179 212 14.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_14280 b2f42f30e27fd025675a9db0946f01f1 388 SMART SM00028 213 246 21.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_14280 b2f42f30e27fd025675a9db0946f01f1 388 Gene3D G3DSA:1.25.40.10 39 173 7.4E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_14280 b2f42f30e27fd025675a9db0946f01f1 388 Gene3D G3DSA:1.25.40.10 174 355 3.4E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_14280 b2f42f30e27fd025675a9db0946f01f1 388 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 386 36.332 T 11-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AMS64_14280 b2f42f30e27fd025675a9db0946f01f1 388 SUPERFAMILY SSF48452 35 277 5.88E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_02185 5e57c2fc3f1a77f1c7fa34c65723f4bf 274 Pfam PF08447 PAS fold 39 127 1.9E-24 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AMS64_02185 5e57c2fc3f1a77f1c7fa34c65723f4bf 274 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 136 4.6E-11 T 11-10-2018 IPR000014 PAS domain AMS64_02185 5e57c2fc3f1a77f1c7fa34c65723f4bf 274 Pfam PF00990 Diguanylate cyclase, GGDEF domain 128 271 6.2E-37 T 11-10-2018 IPR000160 GGDEF domain AMS64_02185 5e57c2fc3f1a77f1c7fa34c65723f4bf 274 Gene3D G3DSA:3.30.450.20 13 126 1.7E-29 T 11-10-2018 AMS64_02185 5e57c2fc3f1a77f1c7fa34c65723f4bf 274 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 128 273 1.1E-39 T 11-10-2018 IPR000160 GGDEF domain AMS64_02185 5e57c2fc3f1a77f1c7fa34c65723f4bf 274 SUPERFAMILY SSF55785 21 127 5.76E-21 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_02185 5e57c2fc3f1a77f1c7fa34c65723f4bf 274 SMART SM00267 114 274 1.9E-28 T 11-10-2018 IPR000160 GGDEF domain AMS64_02185 5e57c2fc3f1a77f1c7fa34c65723f4bf 274 SMART SM00091 16 84 2.3E-4 T 11-10-2018 IPR000014 PAS domain AMS64_02185 5e57c2fc3f1a77f1c7fa34c65723f4bf 274 SUPERFAMILY SSF55073 126 274 1.02E-40 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_02185 5e57c2fc3f1a77f1c7fa34c65723f4bf 274 Gene3D G3DSA:3.30.70.270 127 274 1.5E-44 T 11-10-2018 AMS64_18425 b8db75a390603349d9df29dd25cea499 141 Gene3D G3DSA:3.10.450.430 2 140 6.1E-40 T 11-10-2018 AMS64_18425 b8db75a390603349d9df29dd25cea499 141 Pfam PF10980 Protein of unknown function (DUF2787) 18 138 1.5E-36 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AMS64_01210 4b672fc2eb33c111bae04f46abcab21d 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 1.9E-5 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMS64_01210 4b672fc2eb33c111bae04f46abcab21d 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 8.4E-136 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI AMS64_01210 4b672fc2eb33c111bae04f46abcab21d 326 Pfam PF00107 Zinc-binding dehydrogenase 159 271 3.4E-11 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMS64_01210 4b672fc2eb33c111bae04f46abcab21d 326 SUPERFAMILY SSF51735 116 293 1.1E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_01210 4b672fc2eb33c111bae04f46abcab21d 326 Gene3D G3DSA:3.40.50.720 126 294 6.8E-122 T 11-10-2018 AMS64_01210 4b672fc2eb33c111bae04f46abcab21d 326 SMART SM00829 13 324 1.0E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMS64_01210 4b672fc2eb33c111bae04f46abcab21d 326 Gene3D G3DSA:3.90.180.10 18 325 6.8E-122 T 11-10-2018 AMS64_01210 4b672fc2eb33c111bae04f46abcab21d 326 SUPERFAMILY SSF50129 2 145 2.28E-45 T 11-10-2018 IPR011032 GroES-like superfamily AMS64_17040 336f2fc6dbf397bf8c29cee3096bc79d 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 161 1.8E-69 T 11-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AMS64_17040 336f2fc6dbf397bf8c29cee3096bc79d 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 85.823 T 11-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AMS64_17040 336f2fc6dbf397bf8c29cee3096bc79d 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 4.5E-33 T 11-10-2018 IPR005134 Uncharacterised protein family UPF0114 AMS64_10970 a8e4eb8d7fb5ec8f9ea9e2cc8b465d8f 239 SMART SM00866 90 229 5.1E-31 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMS64_10970 a8e4eb8d7fb5ec8f9ea9e2cc8b465d8f 239 Pfam PF07702 UTRA domain 94 229 2.1E-32 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMS64_10970 a8e4eb8d7fb5ec8f9ea9e2cc8b465d8f 239 SMART SM00345 10 69 3.0E-24 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_10970 a8e4eb8d7fb5ec8f9ea9e2cc8b465d8f 239 SUPERFAMILY SSF46785 2 73 9.09E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_10970 a8e4eb8d7fb5ec8f9ea9e2cc8b465d8f 239 Gene3D G3DSA:1.10.10.10 1 75 5.5E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_10970 a8e4eb8d7fb5ec8f9ea9e2cc8b465d8f 239 SUPERFAMILY SSF64288 59 236 8.79E-43 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMS64_10970 a8e4eb8d7fb5ec8f9ea9e2cc8b465d8f 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 5.8E-23 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_10970 a8e4eb8d7fb5ec8f9ea9e2cc8b465d8f 239 Gene3D G3DSA:3.40.1410.10 76 233 6.4E-36 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMS64_10970 a8e4eb8d7fb5ec8f9ea9e2cc8b465d8f 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.1E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_10970 a8e4eb8d7fb5ec8f9ea9e2cc8b465d8f 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.1E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_04505 a96b9542a73f13c9e28283d77f23ec67 174 PRINTS PR01021 OMPA domain signature 119 135 6.8E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_04505 a96b9542a73f13c9e28283d77f23ec67 174 PRINTS PR01021 OMPA domain signature 104 119 6.8E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_04505 a96b9542a73f13c9e28283d77f23ec67 174 PRINTS PR01021 OMPA domain signature 74 96 6.8E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_04505 a96b9542a73f13c9e28283d77f23ec67 174 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 174 30.509 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 AMS64_04505 a96b9542a73f13c9e28283d77f23ec67 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 72 174 6.9E-44 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 AMS64_04505 a96b9542a73f13c9e28283d77f23ec67 174 Gene3D G3DSA:3.30.1330.60 47 174 1.8E-40 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_04505 a96b9542a73f13c9e28283d77f23ec67 174 SUPERFAMILY SSF103088 60 173 8.11E-34 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_04505 a96b9542a73f13c9e28283d77f23ec67 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMS64_04505 a96b9542a73f13c9e28283d77f23ec67 174 Pfam PF00691 OmpA family 73 168 6.7E-22 T 11-10-2018 IPR006665 OmpA-like domain AMS64_08395 1e5e9f5f496ca814becce470168c0146 555 SMART SM00283 293 554 9.0E-71 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_08395 1e5e9f5f496ca814becce470168c0146 555 SMART SM01049 42 131 1.4E-27 T 11-10-2018 IPR033480 Single Cache domain 2 AMS64_08395 1e5e9f5f496ca814becce470168c0146 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 367 521 2.8E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_08395 1e5e9f5f496ca814becce470168c0146 555 SMART SM00304 224 278 2.4E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_08395 1e5e9f5f496ca814becce470168c0146 555 Pfam PF17200 Single Cache domain 2 46 187 8.0E-33 T 11-10-2018 IPR033480 Single Cache domain 2 AMS64_08395 1e5e9f5f496ca814becce470168c0146 555 Pfam PF00672 HAMP domain 225 274 1.1E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_08395 1e5e9f5f496ca814becce470168c0146 555 SUPERFAMILY SSF58104 246 555 7.85E-77 T 11-10-2018 AMS64_08395 1e5e9f5f496ca814becce470168c0146 555 Gene3D G3DSA:3.30.450.20 27 202 1.1E-40 T 11-10-2018 AMS64_08395 1e5e9f5f496ca814becce470168c0146 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 1.6E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_08395 1e5e9f5f496ca814becce470168c0146 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 1.6E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_08395 1e5e9f5f496ca814becce470168c0146 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 344 1.6E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_08395 1e5e9f5f496ca814becce470168c0146 555 Gene3D G3DSA:1.10.287.950 224 555 6.5E-74 T 11-10-2018 AMS64_10935 bb9820ed2a4f43771d3f533feb170941 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 2.3E-65 T 11-10-2018 AMS64_10935 bb9820ed2a4f43771d3f533feb170941 254 SUPERFAMILY SSF51735 6 251 2.15E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_10935 bb9820ed2a4f43771d3f533feb170941 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.5E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10935 bb9820ed2a4f43771d3f533feb170941 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.5E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10935 bb9820ed2a4f43771d3f533feb170941 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10935 bb9820ed2a4f43771d3f533feb170941 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10935 bb9820ed2a4f43771d3f533feb170941 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10935 bb9820ed2a4f43771d3f533feb170941 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10935 bb9820ed2a4f43771d3f533feb170941 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10935 bb9820ed2a4f43771d3f533feb170941 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10935 bb9820ed2a4f43771d3f533feb170941 254 Gene3D G3DSA:3.40.50.720 1 253 2.1E-78 T 11-10-2018 AMS64_06130 510f3fbc2c3e2376139596f7a695e29e 187 SUPERFAMILY SSF55811 31 153 3.11E-20 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_06130 510f3fbc2c3e2376139596f7a695e29e 187 Pfam PF00293 NUDIX domain 33 153 3.6E-11 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_06130 510f3fbc2c3e2376139596f7a695e29e 187 Gene3D G3DSA:3.90.79.10 19 157 7.8E-22 T 11-10-2018 AMS64_06130 510f3fbc2c3e2376139596f7a695e29e 187 ProSitePatterns PS00893 Nudix box signature. 61 82 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMS64_10395 756708bcb2ccc0616292ba23cba670df 423 Pfam PF00534 Glycosyl transferases group 1 189 347 7.9E-30 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMS64_10395 756708bcb2ccc0616292ba23cba670df 423 SUPERFAMILY SSF53756 6 366 5.56E-64 T 11-10-2018 AMS64_10395 756708bcb2ccc0616292ba23cba670df 423 Gene3D G3DSA:3.40.50.2000 18 171 2.0E-55 T 11-10-2018 AMS64_10395 756708bcb2ccc0616292ba23cba670df 423 Pfam PF13439 Glycosyltransferase Family 4 17 175 1.3E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMS64_10395 756708bcb2ccc0616292ba23cba670df 423 Gene3D G3DSA:3.40.50.2000 172 354 2.0E-55 T 11-10-2018 AMS64_05830 9450c42ab0189a6f4fe903af6efffdc7 185 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 3 169 2.6E-91 T 11-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain AMS64_05830 9450c42ab0189a6f4fe903af6efffdc7 185 Gene3D G3DSA:2.30.110.10 8 177 2.2E-56 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMS64_05830 9450c42ab0189a6f4fe903af6efffdc7 185 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 12 103 5.8E-18 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMS64_05830 9450c42ab0189a6f4fe903af6efffdc7 185 PIRSF PIRSF004633 1 175 4.1E-77 T 11-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain AMS64_05830 9450c42ab0189a6f4fe903af6efffdc7 185 SUPERFAMILY SSF50475 8 160 1.94E-36 T 11-10-2018 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 SUPERFAMILY SSF143724 107 315 1.65E-57 T 11-10-2018 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 SUPERFAMILY SSF56024 318 492 1.37E-53 T 11-10-2018 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 Gene3D G3DSA:1.20.58.310 9 109 1.5E-34 T 11-10-2018 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 SUPERFAMILY SSF56024 501 684 2.92E-71 T 11-10-2018 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 Pfam PF13090 Polyphosphate kinase C-terminal domain 332 677 1.9E-146 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 682 27.179 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 PIRSF PIRSF015589 1 689 2.0E-241 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 Gene3D G3DSA:3.30.870.10 501 687 2.8E-75 T 11-10-2018 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 110 7.8E-31 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 Pfam PF02503 Polyphosphate kinase middle domain 120 319 5.1E-41 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 678 2.9E-262 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 SUPERFAMILY SSF140356 4 105 1.83E-30 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 Gene3D G3DSA:3.30.870.10 323 500 6.4E-71 T 11-10-2018 AMS64_15740 cb209a7d2a1fc9ed24ee767db75042f9 689 Gene3D G3DSA:3.30.1840.10 110 308 3.6E-71 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 AMS64_09915 b1e95776780b8baab23150778b8a074c 311 Pfam PF05175 Methyltransferase small domain 129 218 6.3E-17 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AMS64_09915 b1e95776780b8baab23150778b8a074c 311 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 296 9.3E-136 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AMS64_09915 b1e95776780b8baab23150778b8a074c 311 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 306 4.1E-93 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AMS64_09915 b1e95776780b8baab23150778b8a074c 311 Gene3D G3DSA:3.40.50.150 106 276 2.5E-48 T 11-10-2018 AMS64_09915 b1e95776780b8baab23150778b8a074c 311 Gene3D G3DSA:1.10.8.10 14 105 3.9E-6 T 11-10-2018 AMS64_09915 b1e95776780b8baab23150778b8a074c 311 SUPERFAMILY SSF53335 15 295 4.44E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_09915 b1e95776780b8baab23150778b8a074c 311 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 301 53.336 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AMS64_09915 b1e95776780b8baab23150778b8a074c 311 PIRSF PIRSF037167 2 308 4.1E-147 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AMS64_09915 b1e95776780b8baab23150778b8a074c 311 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 205 211 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMS64_05355 30b3e34c8295e231a1e805aa9014cba7 1054 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1031 6.9E-212 T 11-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMS64_05355 30b3e34c8295e231a1e805aa9014cba7 1054 PIRSF PIRSF000197 3 1050 0.0 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMS64_05355 30b3e34c8295e231a1e805aa9014cba7 1054 Gene3D G3DSA:3.20.20.220 147 525 6.5E-128 T 11-10-2018 AMS64_05355 30b3e34c8295e231a1e805aa9014cba7 1054 SUPERFAMILY SSF51730 190 532 5.1E-111 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AMS64_05355 30b3e34c8295e231a1e805aa9014cba7 1054 Pfam PF01619 Proline dehydrogenase 197 489 5.3E-89 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AMS64_05355 30b3e34c8295e231a1e805aa9014cba7 1054 SUPERFAMILY SSF53720 549 1038 3.01E-133 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMS64_05355 30b3e34c8295e231a1e805aa9014cba7 1054 Gene3D G3DSA:3.40.309.10 810 1002 2.9E-156 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMS64_05355 30b3e34c8295e231a1e805aa9014cba7 1054 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 835 846 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMS64_05355 30b3e34c8295e231a1e805aa9014cba7 1054 Gene3D G3DSA:3.40.605.10 550 1034 2.9E-156 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMS64_05355 30b3e34c8295e231a1e805aa9014cba7 1054 SUPERFAMILY SSF81935 18 189 1.12E-62 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMS64_05355 30b3e34c8295e231a1e805aa9014cba7 1054 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 74 187 2.0E-45 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMS64_05355 30b3e34c8295e231a1e805aa9014cba7 1054 Pfam PF00171 Aldehyde dehydrogenase family 576 1034 1.5E-119 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMS64_08900 7f3927d8edd35aaa61798a9ad3d97736 128 Pfam PF03330 Lytic transglycolase 36 125 6.2E-24 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMS64_08900 7f3927d8edd35aaa61798a9ad3d97736 128 Gene3D G3DSA:2.40.40.10 35 128 9.4E-37 T 11-10-2018 IPR036908 RlpA-like domain superfamily AMS64_08900 7f3927d8edd35aaa61798a9ad3d97736 128 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 38 128 1.2E-35 T 11-10-2018 IPR012997 Rare lipoprotein A AMS64_08900 7f3927d8edd35aaa61798a9ad3d97736 128 SUPERFAMILY SSF50685 35 126 1.95E-18 T 11-10-2018 IPR036908 RlpA-like domain superfamily AMS64_08900 7f3927d8edd35aaa61798a9ad3d97736 128 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 1 128 20.348 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AMS64_00330 6845b840394092cc1b6c796060275509 655 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 44 149 7.1E-18 T 11-10-2018 IPR033414 Periplasmic sensor domain AMS64_00330 6845b840394092cc1b6c796060275509 655 SMART SM00387 541 654 2.3E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00330 6845b840394092cc1b6c796060275509 655 Pfam PF13426 PAS domain 263 360 3.8E-7 T 11-10-2018 IPR000014 PAS domain AMS64_00330 6845b840394092cc1b6c796060275509 655 SUPERFAMILY SSF55874 503 652 1.44E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_00330 6845b840394092cc1b6c796060275509 655 Gene3D G3DSA:3.30.450.20 237 392 2.0E-16 T 11-10-2018 AMS64_00330 6845b840394092cc1b6c796060275509 655 SUPERFAMILY SSF47384 410 450 8.24E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_00330 6845b840394092cc1b6c796060275509 655 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 253 367 1.7E-8 T 11-10-2018 IPR000014 PAS domain AMS64_00330 6845b840394092cc1b6c796060275509 655 Gene3D G3DSA:3.30.565.10 500 655 6.6E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_00330 6845b840394092cc1b6c796060275509 655 SUPERFAMILY SSF55785 237 359 5.8E-16 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_00330 6845b840394092cc1b6c796060275509 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 545 652 2.2E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00330 6845b840394092cc1b6c796060275509 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 631 1.9E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00330 6845b840394092cc1b6c796060275509 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 596 1.9E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00330 6845b840394092cc1b6c796060275509 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 610 1.9E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00330 6845b840394092cc1b6c796060275509 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 651 1.9E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00330 6845b840394092cc1b6c796060275509 655 Gene3D G3DSA:1.10.287.130 393 493 9.1E-21 T 11-10-2018 AMS64_00330 6845b840394092cc1b6c796060275509 655 SMART SM00091 249 317 0.001 T 11-10-2018 IPR000014 PAS domain AMS64_22345 80be87c0b9f9ab89ac4f4e63f39308f4 170 SUPERFAMILY SSF56420 2 164 3.27E-62 T 11-10-2018 IPR036821 Peptide deformylase superfamily AMS64_22345 80be87c0b9f9ab89ac4f4e63f39308f4 170 PRINTS PR01576 Peptide deformylase signature 120 149 3.0E-38 T 11-10-2018 IPR023635 Peptide deformylase AMS64_22345 80be87c0b9f9ab89ac4f4e63f39308f4 170 PRINTS PR01576 Peptide deformylase signature 89 100 3.0E-38 T 11-10-2018 IPR023635 Peptide deformylase AMS64_22345 80be87c0b9f9ab89ac4f4e63f39308f4 170 PRINTS PR01576 Peptide deformylase signature 101 119 3.0E-38 T 11-10-2018 IPR023635 Peptide deformylase AMS64_22345 80be87c0b9f9ab89ac4f4e63f39308f4 170 PRINTS PR01576 Peptide deformylase signature 33 62 3.0E-38 T 11-10-2018 IPR023635 Peptide deformylase AMS64_22345 80be87c0b9f9ab89ac4f4e63f39308f4 170 Pfam PF01327 Polypeptide deformylase 5 152 1.4E-49 T 11-10-2018 IPR023635 Peptide deformylase AMS64_22345 80be87c0b9f9ab89ac4f4e63f39308f4 170 PIRSF PIRSF004749 1 169 3.0E-56 T 11-10-2018 IPR023635 Peptide deformylase AMS64_22345 80be87c0b9f9ab89ac4f4e63f39308f4 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.113 T 11-10-2018 IPR023635 Peptide deformylase AMS64_22345 80be87c0b9f9ab89ac4f4e63f39308f4 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 8.1E-63 T 11-10-2018 IPR023635 Peptide deformylase AMS64_22345 80be87c0b9f9ab89ac4f4e63f39308f4 170 Gene3D G3DSA:3.90.45.10 2 169 2.0E-64 T 11-10-2018 IPR036821 Peptide deformylase superfamily AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 SUPERFAMILY SSF74778 2 160 1.44E-65 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.6E-99 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 Gene3D G3DSA:3.40.1060.10 385 681 2.2E-150 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 Pfam PF11791 Aconitate B N-terminal domain 5 156 3.2E-64 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 Gene3D G3DSA:3.30.499.10 683 865 1.2E-71 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 SUPERFAMILY SSF52016 162 372 3.14E-72 T 11-10-2018 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 SUPERFAMILY SSF53732 379 859 1.07E-151 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 PIRSF PIRSF036687 1 859 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 Gene3D G3DSA:3.30.499.10 402 529 2.2E-150 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 Gene3D G3DSA:3.20.19.10 162 361 9.9E-80 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMS64_03380 1bcdde44e5fe2685c1e0f0d4608d8e45 865 Gene3D G3DSA:1.25.40.310 1 161 1.2E-68 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMS64_06415 f8d9b1d6882aa87432b23eb2b5e850cc 228 SUPERFAMILY SSF46894 118 216 1.98E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_06415 f8d9b1d6882aa87432b23eb2b5e850cc 228 SMART SM00862 145 216 1.2E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_06415 f8d9b1d6882aa87432b23eb2b5e850cc 228 Gene3D G3DSA:1.10.10.10 122 225 1.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_06415 f8d9b1d6882aa87432b23eb2b5e850cc 228 SUPERFAMILY SSF52172 1 131 1.24E-35 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_06415 f8d9b1d6882aa87432b23eb2b5e850cc 228 Pfam PF00072 Response regulator receiver domain 3 112 2.6E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_06415 f8d9b1d6882aa87432b23eb2b5e850cc 228 SMART SM00448 1 112 6.5E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_06415 f8d9b1d6882aa87432b23eb2b5e850cc 228 Gene3D G3DSA:3.40.50.2300 1 121 3.6E-37 T 11-10-2018 AMS64_06415 f8d9b1d6882aa87432b23eb2b5e850cc 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 5.5E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_18705 74a611f381ae82d3add86bd5da3ad7f8 122 Pfam PF00072 Response regulator receiver domain 5 116 1.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_18705 74a611f381ae82d3add86bd5da3ad7f8 122 SMART SM00448 3 116 7.2E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_18705 74a611f381ae82d3add86bd5da3ad7f8 122 SUPERFAMILY SSF52172 3 120 1.99E-36 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_18705 74a611f381ae82d3add86bd5da3ad7f8 122 Gene3D G3DSA:3.40.50.12740 1 121 4.9E-37 T 11-10-2018 AMS64_08545 c7128a498f469bbae8d720bce36ebb09 412 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 395 1.7E-32 T 11-10-2018 IPR000160 GGDEF domain AMS64_08545 c7128a498f469bbae8d720bce36ebb09 412 SUPERFAMILY SSF55073 246 394 3.77E-33 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_08545 c7128a498f469bbae8d720bce36ebb09 412 Gene3D G3DSA:3.30.70.270 227 397 1.4E-42 T 11-10-2018 AMS64_08545 c7128a498f469bbae8d720bce36ebb09 412 SMART SM00267 230 395 7.2E-36 T 11-10-2018 IPR000160 GGDEF domain AMS64_08545 c7128a498f469bbae8d720bce36ebb09 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 241 391 5.5E-32 T 11-10-2018 IPR000160 GGDEF domain AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 Gene3D G3DSA:1.10.4050.10 12 123 1.2E-21 T 11-10-2018 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 SUPERFAMILY SSF81593 300 449 1.8E-43 T 11-10-2018 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 564 816 7.0E-95 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 42 283 2.3E-90 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 SUPERFAMILY SSF81301 36 299 8.5E-87 T 11-10-2018 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 Gene3D G3DSA:1.20.120.1510 460 572 2.8E-31 T 11-10-2018 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 Gene3D G3DSA:3.30.460.100 573 822 1.9E-92 T 11-10-2018 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 Gene3D G3DSA:1.20.120.330 298 453 3.5E-53 T 11-10-2018 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 Gene3D G3DSA:1.20.120.330 823 957 6.2E-41 T 11-10-2018 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 Pfam PF08335 GlnD PII-uridylyltransferase 310 448 4.1E-43 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 Pfam PF08335 GlnD PII-uridylyltransferase 837 929 3.3E-11 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 SUPERFAMILY SSF81301 538 824 5.23E-90 T 11-10-2018 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 Gene3D G3DSA:3.30.460.10 126 297 8.9E-61 T 11-10-2018 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 39 957 19.419 T 11-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AMS64_05330 a4b4ac045c0c825368c35dbf849b5aaa 957 SUPERFAMILY SSF81593 828 955 4.94E-30 T 11-10-2018 AMS64_03970 3e01141a02e61bcab91b8a25f84fb4a3 640 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 380 456 1.7E-11 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMS64_03970 3e01141a02e61bcab91b8a25f84fb4a3 640 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 6.7E-170 T 11-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 AMS64_03970 3e01141a02e61bcab91b8a25f84fb4a3 640 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 498 634 2.3E-28 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMS64_03970 3e01141a02e61bcab91b8a25f84fb4a3 640 Pfam PF02378 Phosphotransferase system, EIIC 18 277 6.0E-18 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMS64_03970 3e01141a02e61bcab91b8a25f84fb4a3 640 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 540 556 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMS64_03970 3e01141a02e61bcab91b8a25f84fb4a3 640 Gene3D G3DSA:3.40.930.10 491 637 1.6E-41 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_03970 3e01141a02e61bcab91b8a25f84fb4a3 640 SUPERFAMILY SSF52794 378 465 9.16E-23 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AMS64_03970 3e01141a02e61bcab91b8a25f84fb4a3 640 SUPERFAMILY SSF55804 497 634 5.62E-35 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_03970 3e01141a02e61bcab91b8a25f84fb4a3 640 Gene3D G3DSA:3.40.50.2300 368 470 1.7E-33 T 11-10-2018 AMS64_05680 df42811ed5763e1b405e6ddf2818b47a 134 Gene3D G3DSA:3.30.300.20 36 134 1.5E-32 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMS64_05680 df42811ed5763e1b405e6ddf2818b47a 134 SUPERFAMILY SSF82784 1 132 4.84E-42 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AMS64_05680 df42811ed5763e1b405e6ddf2818b47a 134 Pfam PF02566 OsmC-like protein 31 127 2.0E-19 T 11-10-2018 IPR003718 OsmC/Ohr family AMS64_05680 df42811ed5763e1b405e6ddf2818b47a 134 Gene3D G3DSA:2.20.25.10 1 35 2.6E-17 T 11-10-2018 AMS64_20910 c0e1bc4b2093719763795a3ceeb9e1dc 659 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 131 1.9E-12 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMS64_20910 c0e1bc4b2093719763795a3ceeb9e1dc 659 SMART SM00283 397 658 1.3E-74 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_20910 c0e1bc4b2093719763795a3ceeb9e1dc 659 Gene3D G3DSA:1.10.287.950 329 659 2.1E-68 T 11-10-2018 AMS64_20910 c0e1bc4b2093719763795a3ceeb9e1dc 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 445 625 6.4E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_20910 c0e1bc4b2093719763795a3ceeb9e1dc 659 SUPERFAMILY SSF58104 350 659 1.44E-70 T 11-10-2018 AMS64_20910 c0e1bc4b2093719763795a3ceeb9e1dc 659 SMART SM00304 330 382 0.0082 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 Gene3D G3DSA:3.50.50.60 110 247 4.6E-85 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 SUPERFAMILY SSF55124 502 629 3.43E-30 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 6.0E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 6.0E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 Gene3D G3DSA:1.10.10.1100 423 477 4.5E-13 T 11-10-2018 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 756 2.8E-14 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 1.9E-11 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 SUPERFAMILY SSF51905 145 310 2.04E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.4E-13 T 11-10-2018 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.4E-13 T 11-10-2018 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 2.4E-13 T 11-10-2018 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.4E-13 T 11-10-2018 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 284 6.7E-49 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 7.6E-10 T 11-10-2018 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 7.6E-10 T 11-10-2018 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 7.6E-10 T 11-10-2018 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 7.6E-10 T 11-10-2018 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 SUPERFAMILY SSF56014 633 808 5.63E-47 T 11-10-2018 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 2.8E-16 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 Gene3D G3DSA:3.30.413.10 632 800 1.2E-29 T 11-10-2018 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 PIRSF PIRSF037149 1 835 0.0 T 11-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 SUPERFAMILY SSF51905 2 189 3.64E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 Gene3D G3DSA:3.50.50.60 7 284 4.6E-85 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_01530 5a7aeeaf66c29309ba6bc456e3de0f57 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 11-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 SUPERFAMILY SSF53790 212 453 9.42E-79 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 Gene3D G3DSA:1.10.8.210 147 207 6.9E-11 T 11-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 294 327 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 Pfam PF13241 Putative NAD(P)-binding 6 113 2.2E-26 T 11-10-2018 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 SUPERFAMILY SSF51735 1 111 1.75E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_04680 9a113acee83210a22daec2c94739ec91 482 Gene3D G3DSA:3.30.160.110 111 146 8.0E-19 T 11-10-2018 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 219 233 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 Gene3D G3DSA:3.30.950.10 330 472 4.7E-48 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 Gene3D G3DSA:3.40.50.720 1 110 1.1E-29 T 11-10-2018 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 214 447 1.9E-93 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 Hamap MF_01646 Siroheme synthase [cysG]. 1 456 51.787 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 203 5.1E-67 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 SUPERFAMILY SSF75615 112 201 5.36E-23 T 11-10-2018 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 Gene3D G3DSA:3.40.1010.10 213 329 6.5E-45 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 Pfam PF14824 Sirohaem biosynthesis protein central 117 143 1.1E-7 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 PIRSF PIRSF036426 1 464 1.8E-195 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 Pfam PF10414 Sirohaem synthase dimerisation region 148 204 2.1E-14 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_04680 9a113acee83210a22daec2c94739ec91 482 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 216 426 1.8E-48 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 Gene3D G3DSA:3.40.50.300 58 315 1.1E-107 T 11-10-2018 AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 11 411 6.0E-210 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 SMART SM01086 317 412 6.4E-34 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 389 6.7E-17 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 6.4E-49 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 SMART SM00382 111 333 1.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 6.5E-21 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 Gene3D G3DSA:3.30.50.30 2 52 5.8E-26 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 SUPERFAMILY SSF57716 13 48 3.71E-12 T 11-10-2018 AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 Gene3D G3DSA:1.10.8.60 316 424 5.3E-41 T 11-10-2018 AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 SUPERFAMILY SSF52540 62 403 1.37E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 415 53.477 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMS64_10845 b0ef375c7a93725c926cdf2cf6100412 424 SMART SM00994 12 51 7.4E-25 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.5E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 SMART SM00478 38 185 6.3E-53 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 6.7E-90 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 Gene3D G3DSA:1.10.1670.10 11 203 1.7E-79 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 PIRSF PIRSF001435 1 210 2.6E-53 T 11-10-2018 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 Gene3D G3DSA:1.10.340.30 21 132 1.7E-79 T 11-10-2018 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.098 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 Pfam PF00633 Helix-hairpin-helix motif 99 127 3.0E-8 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 SUPERFAMILY SSF48150 2 207 8.32E-73 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 SMART SM00525 186 206 6.5E-6 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMS64_12615 d4e09dc1302712f9ab14d493b438893c 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 6.5E-18 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMS64_03250 5e375ac78e168535111457705158acf6 360 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 347 3.7E-109 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03250 5e375ac78e168535111457705158acf6 360 Gene3D G3DSA:3.40.50.2000 1 174 2.5E-65 T 11-10-2018 AMS64_03250 5e375ac78e168535111457705158acf6 360 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 183 344 6.8E-40 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AMS64_03250 5e375ac78e168535111457705158acf6 360 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 353 37.072 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03250 5e375ac78e168535111457705158acf6 360 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 4.2E-42 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03250 5e375ac78e168535111457705158acf6 360 SUPERFAMILY SSF53756 3 353 7.23E-122 T 11-10-2018 AMS64_03250 5e375ac78e168535111457705158acf6 360 Gene3D G3DSA:3.40.50.2000 175 337 6.5E-49 T 11-10-2018 AMS64_08110 2d9d4bac552c78cd8a301e3ea4909063 287 SUPERFAMILY SSF53850 90 285 2.67E-28 T 11-10-2018 AMS64_08110 2d9d4bac552c78cd8a301e3ea4909063 287 Gene3D G3DSA:3.40.190.10 160 260 1.7E-33 T 11-10-2018 AMS64_08110 2d9d4bac552c78cd8a301e3ea4909063 287 SUPERFAMILY SSF46785 1 84 6.29E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_08110 2d9d4bac552c78cd8a301e3ea4909063 287 Gene3D G3DSA:1.10.10.10 1 84 2.5E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_08110 2d9d4bac552c78cd8a301e3ea4909063 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08110 2d9d4bac552c78cd8a301e3ea4909063 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08110 2d9d4bac552c78cd8a301e3ea4909063 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08110 2d9d4bac552c78cd8a301e3ea4909063 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.8E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08110 2d9d4bac552c78cd8a301e3ea4909063 287 Pfam PF03466 LysR substrate binding domain 88 283 3.7E-28 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_08110 2d9d4bac552c78cd8a301e3ea4909063 287 Gene3D G3DSA:3.40.190.10 88 277 1.7E-33 T 11-10-2018 AMS64_09980 ac3550967d79ac174c22068e4b7457d6 638 Pfam PF00270 DEAD/DEAH box helicase 17 177 5.0E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_09980 ac3550967d79ac174c22068e4b7457d6 638 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 5 343 2.8E-107 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AMS64_09980 ac3550967d79ac174c22068e4b7457d6 638 Gene3D G3DSA:1.10.10.10 461 636 6.0E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_09980 ac3550967d79ac174c22068e4b7457d6 638 SMART SM00487 11 207 4.4E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_09980 ac3550967d79ac174c22068e4b7457d6 638 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 130 139 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AMS64_09980 ac3550967d79ac174c22068e4b7457d6 638 Pfam PF00271 Helicase conserved C-terminal domain 222 320 3.7E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_09980 ac3550967d79ac174c22068e4b7457d6 638 SMART SM00490 241 322 1.4E-25 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_09980 ac3550967d79ac174c22068e4b7457d6 638 Gene3D G3DSA:3.40.50.300 198 380 4.2E-43 T 11-10-2018 AMS64_09980 ac3550967d79ac174c22068e4b7457d6 638 SUPERFAMILY SSF52540 56 337 1.09E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09980 ac3550967d79ac174c22068e4b7457d6 638 Pfam PF16124 RecQ zinc-binding 509 555 6.2E-9 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMS64_09980 ac3550967d79ac174c22068e4b7457d6 638 Gene3D G3DSA:3.40.50.300 1 197 4.4E-68 T 11-10-2018 AMS64_15820 a65552bcec243a509943bfe2c130dbde 201 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 67 199 9.2E-37 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AMS64_15820 a65552bcec243a509943bfe2c130dbde 201 Gene3D G3DSA:2.30.30.760 143 200 5.4E-15 T 11-10-2018 AMS64_15820 a65552bcec243a509943bfe2c130dbde 201 Pfam PF13144 Chaperone for flagella basal body P-ring formation 1 199 2.7E-52 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AMS64_15820 a65552bcec243a509943bfe2c130dbde 201 SMART SM00858 79 141 7.1E-10 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 3.5E-42 T 11-10-2018 IPR003111 Lon, substrate-binding domain AMS64_10840 d99f4060463e26824e982ed37831dd00 784 PIRSF PIRSF001174 1 775 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 2.6E-56 T 11-10-2018 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 2.6E-56 T 11-10-2018 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 2.6E-56 T 11-10-2018 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 2.6E-56 T 11-10-2018 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 2.6E-56 T 11-10-2018 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 Gene3D G3DSA:1.10.8.60 491 584 1.5E-33 T 11-10-2018 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 Gene3D G3DSA:2.30.130.40 1 117 7.1E-37 T 11-10-2018 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 SMART SM00382 348 492 6.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_10840 d99f4060463e26824e982ed37831dd00 784 SUPERFAMILY SSF52540 315 587 6.81E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10840 d99f4060463e26824e982ed37831dd00 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.4E-99 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 Gene3D G3DSA:3.40.50.300 314 490 4.6E-62 T 11-10-2018 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 Gene3D G3DSA:1.20.58.1480 120 245 1.9E-44 T 11-10-2018 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.0E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 Gene3D G3DSA:3.30.230.10 585 772 1.9E-87 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_10840 d99f4060463e26824e982ed37831dd00 784 SUPERFAMILY SSF54211 595 771 1.56E-60 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_10840 d99f4060463e26824e982ed37831dd00 784 SUPERFAMILY SSF88697 10 201 8.2E-52 T 11-10-2018 IPR015947 PUA-like superfamily AMS64_10840 d99f4060463e26824e982ed37831dd00 784 Hamap MF_01973 Lon protease [lon]. 11 772 71.709 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AMS64_10840 d99f4060463e26824e982ed37831dd00 784 SMART SM00464 10 202 1.5E-78 T 11-10-2018 IPR003111 Lon, substrate-binding domain AMS64_16180 b5f57d4de9fe3b68ee3ad500361efbf2 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.9E-47 T 11-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 AMS64_16180 b5f57d4de9fe3b68ee3ad500361efbf2 87 PRINTS PR00160 Glutaredoxin signature 66 79 9.0E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup AMS64_16180 b5f57d4de9fe3b68ee3ad500361efbf2 87 PRINTS PR00160 Glutaredoxin signature 3 21 9.0E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup AMS64_16180 b5f57d4de9fe3b68ee3ad500361efbf2 87 PRINTS PR00160 Glutaredoxin signature 52 65 9.0E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup AMS64_16180 b5f57d4de9fe3b68ee3ad500361efbf2 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AMS64_16180 b5f57d4de9fe3b68ee3ad500361efbf2 87 Gene3D G3DSA:3.40.30.10 3 84 3.9E-23 T 11-10-2018 AMS64_16180 b5f57d4de9fe3b68ee3ad500361efbf2 87 SUPERFAMILY SSF52833 4 81 7.79E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_16180 b5f57d4de9fe3b68ee3ad500361efbf2 87 Pfam PF00462 Glutaredoxin 4 69 2.2E-15 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMS64_20030 b5360f86c00359ab4dcad350098238e2 407 Pfam PF01566 Natural resistance-associated macrophage protein 35 381 1.7E-124 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMS64_20030 b5360f86c00359ab4dcad350098238e2 407 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 16 375 1.1E-96 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMS64_20030 b5360f86c00359ab4dcad350098238e2 407 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 6 407 36.256 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMS64_20030 b5360f86c00359ab4dcad350098238e2 407 PRINTS PR00447 Natural resistance-associated macrophage protein signature 94 120 3.2E-28 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMS64_20030 b5360f86c00359ab4dcad350098238e2 407 PRINTS PR00447 Natural resistance-associated macrophage protein signature 297 316 3.2E-28 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMS64_20030 b5360f86c00359ab4dcad350098238e2 407 PRINTS PR00447 Natural resistance-associated macrophage protein signature 122 141 3.2E-28 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMS64_20030 b5360f86c00359ab4dcad350098238e2 407 PRINTS PR00447 Natural resistance-associated macrophage protein signature 147 168 3.2E-28 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMS64_20030 b5360f86c00359ab4dcad350098238e2 407 PRINTS PR00447 Natural resistance-associated macrophage protein signature 197 220 3.2E-28 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMS64_05455 438bfe413e85fe961e270046f1880a4b 193 Gene3D G3DSA:1.10.10.10 124 193 6.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_05455 438bfe413e85fe961e270046f1880a4b 193 Pfam PF04542 Sigma-70 region 2 26 93 1.1E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_05455 438bfe413e85fe961e270046f1880a4b 193 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 48 79 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMS64_05455 438bfe413e85fe961e270046f1880a4b 193 SUPERFAMILY SSF88946 8 106 5.49E-31 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_05455 438bfe413e85fe961e270046f1880a4b 193 Pfam PF08281 Sigma-70, region 4 135 182 2.0E-19 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMS64_05455 438bfe413e85fe961e270046f1880a4b 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 187 1.9E-34 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMS64_05455 438bfe413e85fe961e270046f1880a4b 193 SUPERFAMILY SSF88659 125 187 7.29E-19 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_05455 438bfe413e85fe961e270046f1880a4b 193 Gene3D G3DSA:1.10.1740.10 1 122 1.9E-43 T 11-10-2018 AMS64_05455 438bfe413e85fe961e270046f1880a4b 193 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 3 191 3.3E-100 T 11-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMS64_19465 cddadb3c96bf58497df002a371d79ed8 347 Pfam PF09383 NIL domain 268 339 6.7E-17 T 11-10-2018 IPR018449 NIL domain AMS64_19465 cddadb3c96bf58497df002a371d79ed8 347 SUPERFAMILY SSF52540 1 239 6.17E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19465 cddadb3c96bf58497df002a371d79ed8 347 Gene3D G3DSA:3.30.70.260 233 343 1.1E-33 T 11-10-2018 AMS64_19465 cddadb3c96bf58497df002a371d79ed8 347 Pfam PF00005 ABC transporter 21 169 1.7E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_19465 cddadb3c96bf58497df002a371d79ed8 347 SMART SM00930 265 340 7.0E-26 T 11-10-2018 IPR018449 NIL domain AMS64_19465 cddadb3c96bf58497df002a371d79ed8 347 Gene3D G3DSA:3.40.50.300 1 230 1.4E-71 T 11-10-2018 AMS64_19465 cddadb3c96bf58497df002a371d79ed8 347 SMART SM00382 30 224 1.8E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_19465 cddadb3c96bf58497df002a371d79ed8 347 SUPERFAMILY SSF55021 248 343 5.61E-24 T 11-10-2018 AMS64_19465 cddadb3c96bf58497df002a371d79ed8 347 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 7.5E-173 T 11-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 AMS64_19465 cddadb3c96bf58497df002a371d79ed8 347 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_01385 fb5813c8b3afd7689956fc58f22b6b35 588 Pfam PF01522 Polysaccharide deacetylase 406 542 7.2E-30 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMS64_01385 fb5813c8b3afd7689956fc58f22b6b35 588 SUPERFAMILY SSF88713 367 563 9.89E-37 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMS64_01385 fb5813c8b3afd7689956fc58f22b6b35 588 Pfam PF13439 Glycosyltransferase Family 4 13 159 1.6E-23 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMS64_01385 fb5813c8b3afd7689956fc58f22b6b35 588 Gene3D G3DSA:3.20.20.370 340 578 6.6E-56 T 11-10-2018 AMS64_01385 fb5813c8b3afd7689956fc58f22b6b35 588 Gene3D G3DSA:3.40.50.2000 1 165 2.7E-21 T 11-10-2018 AMS64_01385 fb5813c8b3afd7689956fc58f22b6b35 588 Gene3D G3DSA:3.40.50.2000 167 320 2.0E-6 T 11-10-2018 AMS64_01385 fb5813c8b3afd7689956fc58f22b6b35 588 SUPERFAMILY SSF53756 11 338 1.13E-37 T 11-10-2018 AMS64_01940 824465732b9dc3e6ee6e4652e9c1518f 240 SMART SM00862 157 233 2.5E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_01940 824465732b9dc3e6ee6e4652e9c1518f 240 SMART SM00448 6 117 1.7E-44 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_01940 824465732b9dc3e6ee6e4652e9c1518f 240 SUPERFAMILY SSF52172 3 127 3.98E-43 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_01940 824465732b9dc3e6ee6e4652e9c1518f 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 1.8E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_01940 824465732b9dc3e6ee6e4652e9c1518f 240 SUPERFAMILY SSF46894 134 235 5.67E-27 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_01940 824465732b9dc3e6ee6e4652e9c1518f 240 Gene3D G3DSA:3.40.50.2300 1 126 1.5E-41 T 11-10-2018 AMS64_01940 824465732b9dc3e6ee6e4652e9c1518f 240 Pfam PF00072 Response regulator receiver domain 8 118 1.1E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_01940 824465732b9dc3e6ee6e4652e9c1518f 240 Gene3D G3DSA:1.10.10.10 131 239 5.3E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_00465 11fd7ea3ad75f2b08fcf19ce52eed653 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 4.7E-101 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AMS64_00465 11fd7ea3ad75f2b08fcf19ce52eed653 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.884 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AMS64_00465 11fd7ea3ad75f2b08fcf19ce52eed653 453 SUPERFAMILY SSF116878 120 453 2.09E-51 T 11-10-2018 AMS64_00465 11fd7ea3ad75f2b08fcf19ce52eed653 453 Pfam PF12631 MnmE helical domain 122 450 1.6E-59 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AMS64_00465 11fd7ea3ad75f2b08fcf19ce52eed653 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.4E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_00465 11fd7ea3ad75f2b08fcf19ce52eed653 453 Gene3D G3DSA:1.20.120.430 121 453 6.6E-102 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AMS64_00465 11fd7ea3ad75f2b08fcf19ce52eed653 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 3.0E-34 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AMS64_00465 11fd7ea3ad75f2b08fcf19ce52eed653 453 Gene3D G3DSA:3.40.50.300 216 381 6.6E-102 T 11-10-2018 AMS64_00465 11fd7ea3ad75f2b08fcf19ce52eed653 453 Gene3D G3DSA:3.30.1360.120 1 120 9.2E-38 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMS64_00465 11fd7ea3ad75f2b08fcf19ce52eed653 453 SUPERFAMILY SSF52540 71 371 5.04E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00465 11fd7ea3ad75f2b08fcf19ce52eed653 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 348 2.7E-20 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_02025 20d20ce15a35bd0d6b222aefa503a88e 101 Gene3D G3DSA:4.10.830.10 40 101 1.2E-24 T 11-10-2018 AMS64_02025 20d20ce15a35bd0d6b222aefa503a88e 101 SUPERFAMILY SSF57716 2 101 8.55E-39 T 11-10-2018 AMS64_02025 20d20ce15a35bd0d6b222aefa503a88e 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.912 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AMS64_02025 20d20ce15a35bd0d6b222aefa503a88e 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02025 20d20ce15a35bd0d6b222aefa503a88e 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.9E-27 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_08040 2b1bc12bff5f1669a2fce0af79609d28 92 Pfam PF08891 YfcL protein 5 88 7.4E-32 T 11-10-2018 IPR014987 Uncharacterised protein family YfcL AMS64_06625 831cdbf2c769373c77501401cef95732 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_06625 831cdbf2c769373c77501401cef95732 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 3.8E-117 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMS64_06625 831cdbf2c769373c77501401cef95732 334 Gene3D G3DSA:3.40.50.620 6 329 8.3E-144 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_06625 831cdbf2c769373c77501401cef95732 334 SUPERFAMILY SSF52374 5 330 2.6E-101 T 11-10-2018 AMS64_06625 831cdbf2c769373c77501401cef95732 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.721 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AMS64_06625 831cdbf2c769373c77501401cef95732 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 1.0E-27 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMS64_06625 831cdbf2c769373c77501401cef95732 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 1.0E-27 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMS64_06625 831cdbf2c769373c77501401cef95732 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 1.0E-27 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMS64_06625 831cdbf2c769373c77501401cef95732 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.0E-27 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMS64_06625 831cdbf2c769373c77501401cef95732 334 Gene3D G3DSA:1.10.240.10 186 298 8.3E-144 T 11-10-2018 AMS64_06625 831cdbf2c769373c77501401cef95732 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 4.4E-85 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_16475 9afeeec350539c4c5e62f284f9bdb1e1 471 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 335 5.9E-91 T 11-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal AMS64_16475 9afeeec350539c4c5e62f284f9bdb1e1 471 SUPERFAMILY SSF49899 335 466 1.03E-10 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMS64_16475 9afeeec350539c4c5e62f284f9bdb1e1 471 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 414 445 3.2E-5 T 11-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal AMS64_16475 9afeeec350539c4c5e62f284f9bdb1e1 471 SMART SM00640 31 431 5.7E-122 T 11-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 AMS64_16475 9afeeec350539c4c5e62f284f9bdb1e1 471 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 18 441 1.5E-137 T 11-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AMS64_16475 9afeeec350539c4c5e62f284f9bdb1e1 471 Gene3D G3DSA:2.115.10.20 4 350 9.7E-113 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMS64_16475 9afeeec350539c4c5e62f284f9bdb1e1 471 SUPERFAMILY SSF75005 22 336 5.02E-106 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMS64_16475 9afeeec350539c4c5e62f284f9bdb1e1 471 Gene3D G3DSA:2.60.120.560 387 459 8.7E-6 T 11-10-2018 AMS64_21965 2056228269ed6beb6f151627c4ebf7c7 251 SUPERFAMILY SSF48452 30 105 4.05E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_21965 2056228269ed6beb6f151627c4ebf7c7 251 Pfam PF13525 Outer membrane lipoprotein 29 235 1.1E-74 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like AMS64_21965 2056228269ed6beb6f151627c4ebf7c7 251 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 7 247 1.1E-85 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AMS64_21965 2056228269ed6beb6f151627c4ebf7c7 251 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 243 38.109 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AMS64_21965 2056228269ed6beb6f151627c4ebf7c7 251 Gene3D G3DSA:1.25.40.10 30 250 6.7E-57 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_18750 294caac942943771c50674bf1f26de2f 715 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 690 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMS64_18750 294caac942943771c50674bf1f26de2f 715 SUPERFAMILY SSF55666 449 547 1.15E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMS64_18750 294caac942943771c50674bf1f26de2f 715 Gene3D G3DSA:3.30.230.70 231 548 1.9E-114 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMS64_18750 294caac942943771c50674bf1f26de2f 715 Gene3D G3DSA:3.30.230.70 1 229 2.9E-79 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMS64_18750 294caac942943771c50674bf1f26de2f 715 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 319 6.2E-20 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMS64_18750 294caac942943771c50674bf1f26de2f 715 SMART SM00322 551 616 2.3E-11 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AMS64_18750 294caac942943771c50674bf1f26de2f 715 SUPERFAMILY SSF46915 237 319 1.15E-16 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMS64_18750 294caac942943771c50674bf1f26de2f 715 SUPERFAMILY SSF54211 3 143 1.62E-50 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_18750 294caac942943771c50674bf1f26de2f 715 Pfam PF00575 S1 RNA binding domain 618 689 1.6E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMS64_18750 294caac942943771c50674bf1f26de2f 715 PIRSF PIRSF005499 1 714 4.2E-297 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMS64_18750 294caac942943771c50674bf1f26de2f 715 Pfam PF00013 KH domain 555 612 2.1E-9 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 AMS64_18750 294caac942943771c50674bf1f26de2f 715 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 2.5E-12 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMS64_18750 294caac942943771c50674bf1f26de2f 715 Pfam PF03725 3' exoribonuclease family, domain 2 459 526 1.2E-4 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMS64_18750 294caac942943771c50674bf1f26de2f 715 SMART SM00316 619 689 2.3E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_18750 294caac942943771c50674bf1f26de2f 715 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 30.191 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMS64_18750 294caac942943771c50674bf1f26de2f 715 Gene3D G3DSA:3.30.1370.10 549 620 3.4E-18 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AMS64_18750 294caac942943771c50674bf1f26de2f 715 SUPERFAMILY SSF55666 144 235 4.63E-30 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMS64_18750 294caac942943771c50674bf1f26de2f 715 SUPERFAMILY SSF54211 292 487 1.72E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_18750 294caac942943771c50674bf1f26de2f 715 SUPERFAMILY SSF50249 619 693 1.57E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_18750 294caac942943771c50674bf1f26de2f 715 Gene3D G3DSA:2.40.50.140 621 693 4.9E-28 T 11-10-2018 AMS64_18750 294caac942943771c50674bf1f26de2f 715 SUPERFAMILY SSF54791 553 639 7.21E-22 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AMS64_18750 294caac942943771c50674bf1f26de2f 715 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 1.3E-19 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMS64_18750 294caac942943771c50674bf1f26de2f 715 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 4.1E-22 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMS64_14705 8ae5a41f9de0a0dfcd4c198ae168e97c 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 251 2.3E-64 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_14705 8ae5a41f9de0a0dfcd4c198ae168e97c 257 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 6 250 1.4E-82 T 11-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 AMS64_14705 8ae5a41f9de0a0dfcd4c198ae168e97c 257 SMART SM00079 26 252 5.1E-4 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AMS64_14705 8ae5a41f9de0a0dfcd4c198ae168e97c 257 Gene3D G3DSA:3.40.190.10 29 250 5.4E-76 T 11-10-2018 AMS64_14705 8ae5a41f9de0a0dfcd4c198ae168e97c 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AMS64_14705 8ae5a41f9de0a0dfcd4c198ae168e97c 257 SMART SM00062 26 253 5.1E-67 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_14705 8ae5a41f9de0a0dfcd4c198ae168e97c 257 SUPERFAMILY SSF53850 1 254 3.03E-70 T 11-10-2018 AMS64_14705 8ae5a41f9de0a0dfcd4c198ae168e97c 257 Gene3D G3DSA:3.40.190.10 112 209 5.4E-76 T 11-10-2018 AMS64_00350 3c5593afa204ba048d8e8b62bf79553c 175 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 172 26.189 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AMS64_00350 3c5593afa204ba048d8e8b62bf79553c 175 Pfam PF02669 K+-transporting ATPase, c chain 3 170 5.7E-49 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AMS64_00350 3c5593afa204ba048d8e8b62bf79553c 175 PIRSF PIRSF001296 1 175 1.5E-50 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 Pfam PF13533 Biotin-lipoyl like 87 115 2.9E-7 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 39 472 1.6E-136 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 SUPERFAMILY SSF111369 71 140 5.49E-6 T 11-10-2018 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 Gene3D G3DSA:2.40.50.100 77 111 8.2E-10 T 11-10-2018 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 Gene3D G3DSA:2.40.50.100 324 360 7.8E-15 T 11-10-2018 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 90 110 3.0E-50 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 393 416 3.0E-50 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 48 71 3.0E-50 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 451 471 3.0E-50 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 369 393 3.0E-50 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 336 357 3.0E-50 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 436 451 3.0E-50 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 Pfam PF13437 HlyD family secretion protein 324 430 4.3E-17 T 11-10-2018 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 Gene3D G3DSA:2.40.30.170 361 449 7.8E-15 T 11-10-2018 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 Gene3D G3DSA:2.40.30.170 66 76 8.2E-10 T 11-10-2018 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 Gene3D G3DSA:1.10.287.470 201 323 7.8E-15 T 11-10-2018 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 Gene3D G3DSA:1.10.287.470 112 140 8.2E-10 T 11-10-2018 AMS64_11780 6f6acecff4ff110a6f33764fcd37ac01 472 ProSitePatterns PS00543 HlyD family secretion proteins signature. 436 458 - T 11-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 SUPERFAMILY SSF47384 271 345 1.61E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 Gene3D G3DSA:3.40.50.2300 517 651 1.4E-21 T 11-10-2018 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 Pfam PF01627 Hpt domain 827 906 1.9E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 444 9.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 483 9.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 458 9.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 502 9.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 Pfam PF00072 Response regulator receiver domain 670 779 2.2E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 Pfam PF00072 Response regulator receiver domain 523 636 1.5E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 Gene3D G3DSA:3.30.565.10 343 507 2.8E-51 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 Gene3D G3DSA:3.40.50.2300 652 786 1.3E-39 T 11-10-2018 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 Gene3D G3DSA:1.10.287.130 256 342 7.8E-26 T 11-10-2018 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 Gene3D G3DSA:1.20.120.160 804 914 3.2E-19 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 SUPERFAMILY SSF52172 521 649 5.69E-23 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 SMART SM00387 391 505 2.0E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 503 3.5E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 SUPERFAMILY SSF52172 666 785 1.2E-36 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 SMART SM00388 279 344 1.2E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 SUPERFAMILY SSF47226 764 901 2.49E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 SUPERFAMILY SSF55874 333 503 4.98E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 Pfam PF00512 His Kinase A (phospho-acceptor) domain 279 344 1.1E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 SMART SM00448 668 781 3.5E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_08170 dfba3b764fdd34b0f03fe07fee65f3ae 934 SMART SM00448 521 636 3.2E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_05930 17c86360b5f175e21f43630c04291026 870 Gene3D G3DSA:3.10.50.10 445 520 3.8E-161 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AMS64_05930 17c86360b5f175e21f43630c04291026 870 SMART SM00089 670 756 0.049 T 11-10-2018 IPR022409 PKD/Chitinase domain AMS64_05930 17c86360b5f175e21f43630c04291026 870 SMART SM00089 43 133 2.3E-7 T 11-10-2018 IPR022409 PKD/Chitinase domain AMS64_05930 17c86360b5f175e21f43630c04291026 870 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMS64_05930 17c86360b5f175e21f43630c04291026 870 Pfam PF00704 Glycosyl hydrolases family 18 160 546 1.8E-87 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AMS64_05930 17c86360b5f175e21f43630c04291026 870 Gene3D G3DSA:2.60.40.10 570 665 8.0E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_05930 17c86360b5f175e21f43630c04291026 870 Gene3D G3DSA:2.10.10.20 766 823 1.3E-14 T 11-10-2018 AMS64_05930 17c86360b5f175e21f43630c04291026 870 Gene3D G3DSA:2.60.40.10 7 130 8.2E-46 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_05930 17c86360b5f175e21f43630c04291026 870 SUPERFAMILY SSF81296 25 132 7.42E-36 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_05930 17c86360b5f175e21f43630c04291026 870 Pfam PF08329 Chitinase A, N-terminal domain 24 155 4.9E-59 T 11-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMS64_05930 17c86360b5f175e21f43630c04291026 870 SMART SM00495 822 864 2.3E-11 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_05930 17c86360b5f175e21f43630c04291026 870 SMART SM00495 775 818 3.8E-16 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_05930 17c86360b5f175e21f43630c04291026 870 Gene3D G3DSA:3.20.20.80 158 552 3.8E-161 T 11-10-2018 AMS64_05930 17c86360b5f175e21f43630c04291026 870 SMART SM00636 158 546 8.5E-158 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AMS64_05930 17c86360b5f175e21f43630c04291026 870 SUPERFAMILY SSF51445 135 560 7.66E-98 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_05930 17c86360b5f175e21f43630c04291026 870 Pfam PF02010 REJ domain 576 767 1.1E-8 T 11-10-2018 IPR002859 PKD/REJ-like domain AMS64_05930 17c86360b5f175e21f43630c04291026 870 SUPERFAMILY SSF51055 766 821 2.62E-14 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_05930 17c86360b5f175e21f43630c04291026 870 SUPERFAMILY SSF51055 825 865 2.22E-12 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_05930 17c86360b5f175e21f43630c04291026 870 SUPERFAMILY SSF54556 446 518 2.14E-17 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AMS64_05930 17c86360b5f175e21f43630c04291026 870 Gene3D G3DSA:2.10.10.20 824 868 1.5E-14 T 11-10-2018 AMS64_05930 17c86360b5f175e21f43630c04291026 870 Gene3D G3DSA:2.60.40.10 666 761 2.8E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_16430 065074e1431aadeeded66ca557ec75c5 346 Gene3D G3DSA:2.40.30.170 45 275 1.8E-59 T 11-10-2018 AMS64_16430 065074e1431aadeeded66ca557ec75c5 346 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 331 2.1E-59 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_16430 065074e1431aadeeded66ca557ec75c5 346 Gene3D G3DSA:2.40.420.20 36 331 1.8E-59 T 11-10-2018 AMS64_16430 065074e1431aadeeded66ca557ec75c5 346 SUPERFAMILY SSF111369 46 276 5.49E-27 T 11-10-2018 AMS64_16430 065074e1431aadeeded66ca557ec75c5 346 Gene3D G3DSA:1.10.287.470 91 162 1.8E-59 T 11-10-2018 AMS64_16430 065074e1431aadeeded66ca557ec75c5 346 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 268 1.5E-16 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMS64_16430 065074e1431aadeeded66ca557ec75c5 346 Gene3D G3DSA:2.40.50.100 57 197 1.8E-59 T 11-10-2018 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 PRINTS PR00072 Malic enzyme signature 160 182 3.2E-68 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 PRINTS PR00072 Malic enzyme signature 219 237 3.2E-68 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 PRINTS PR00072 Malic enzyme signature 65 89 3.2E-68 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 PRINTS PR00072 Malic enzyme signature 369 385 3.2E-68 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 PRINTS PR00072 Malic enzyme signature 244 260 3.2E-68 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 PRINTS PR00072 Malic enzyme signature 124 153 3.2E-68 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 PRINTS PR00072 Malic enzyme signature 275 291 3.2E-68 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 Gene3D G3DSA:3.40.50.720 246 516 5.1E-86 T 11-10-2018 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 SUPERFAMILY SSF53223 7 247 3.81E-84 T 11-10-2018 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 Pfam PF03949 Malic enzyme, NAD binding domain 248 486 1.9E-73 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 Pfam PF00390 Malic enzyme, N-terminal domain 60 238 1.0E-64 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 SMART SM01274 59 238 1.4E-88 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 PIRSF PIRSF000106 1 515 8.6E-179 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 Gene3D G3DSA:3.40.50.10380 2 245 3.2E-91 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AMS64_17575 89576f83ef5f086516388b70e30250ff 516 SUPERFAMILY SSF51735 248 512 6.4E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_17575 89576f83ef5f086516388b70e30250ff 516 SMART SM00919 248 488 3.9E-95 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMS64_00620 da51aa151241fcef1682e42d3062ce1d 176 Pfam PF01618 MotA/TolQ/ExbB proton channel family 64 164 4.4E-21 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMS64_00615 2c71b521960c220f94dfcbc004db7cef 434 Pfam PF01618 MotA/TolQ/ExbB proton channel family 298 412 5.5E-30 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMS64_00615 2c71b521960c220f94dfcbc004db7cef 434 PIRSF PIRSF037714 18 434 4.0E-127 T 11-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AMS64_05550 9ba2b2674f22bb6bd6347935aef862af 111 Gene3D G3DSA:3.30.70.970 1 111 1.1E-48 T 11-10-2018 IPR036701 RraB-like superfamily AMS64_05550 9ba2b2674f22bb6bd6347935aef862af 111 SUPERFAMILY SSF89946 1 111 1.83E-37 T 11-10-2018 IPR036701 RraB-like superfamily AMS64_05550 9ba2b2674f22bb6bd6347935aef862af 111 Pfam PF06877 Regulator of ribonuclease activity B 6 107 8.5E-32 T 11-10-2018 IPR009671 Regulator of ribonuclease activity B domain AMS64_05550 9ba2b2674f22bb6bd6347935aef862af 111 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 1 111 29.732 T 11-10-2018 IPR016716 Regulator of ribonuclease activity B AMS64_05550 9ba2b2674f22bb6bd6347935aef862af 111 PIRSF PIRSF018193 1 111 6.1E-48 T 11-10-2018 IPR016716 Regulator of ribonuclease activity B AMS64_10775 f1e8777301173b71e4a110056457b46e 595 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 459 591 1.1E-39 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AMS64_10775 f1e8777301173b71e4a110056457b46e 595 SUPERFAMILY SSF54631 155 265 1.57E-9 T 11-10-2018 AMS64_10775 f1e8777301173b71e4a110056457b46e 595 Pfam PF03445 Putative nucleotidyltransferase DUF294 291 421 4.2E-36 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AMS64_10775 f1e8777301173b71e4a110056457b46e 595 SMART SM00100 11 126 9.6E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_10775 f1e8777301173b71e4a110056457b46e 595 Gene3D G3DSA:3.10.580.10 147 274 3.2E-10 T 11-10-2018 AMS64_10775 f1e8777301173b71e4a110056457b46e 595 Gene3D G3DSA:2.60.120.10 2 135 3.4E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_10775 f1e8777301173b71e4a110056457b46e 595 Pfam PF00027 Cyclic nucleotide-binding domain 31 111 5.8E-9 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_10775 f1e8777301173b71e4a110056457b46e 595 SUPERFAMILY SSF51206 10 132 1.7E-23 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMS64_10775 f1e8777301173b71e4a110056457b46e 595 SMART SM00116 219 266 7.9E-4 T 11-10-2018 IPR000644 CBS domain AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 SUPERFAMILY SSF82714 723 810 6.8E-23 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 SUPERFAMILY SSF82866 296 497 2.49E-50 T 11-10-2018 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 Gene3D G3DSA:3.30.2090.10 722 810 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 11-10-2018 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 Gene3D G3DSA:3.30.70.1440 670 866 0.0 T 11-10-2018 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 Gene3D G3DSA:3.30.70.1430 568 669 0.0 T 11-10-2018 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 Gene3D G3DSA:1.20.1640.10 8 513 0.0 T 11-10-2018 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 SUPERFAMILY SSF82693 673 857 4.45E-29 T 11-10-2018 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 Gene3D G3DSA:3.30.70.1430 38 818 0.0 T 11-10-2018 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 SUPERFAMILY SSF82693 566 671 5.23E-33 T 11-10-2018 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 SUPERFAMILY SSF82866 833 1027 1.57E-45 T 11-10-2018 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 Pfam PF00873 AcrB/AcrD/AcrF family 1 1026 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.7E-113 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.7E-113 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.7E-113 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.7E-113 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.7E-113 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.7E-113 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.7E-113 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.7E-113 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.7E-113 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 SUPERFAMILY SSF82714 182 270 5.49E-21 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1034 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 Gene3D G3DSA:1.20.1640.10 514 1023 0.0 T 11-10-2018 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 SUPERFAMILY SSF82693 135 330 2.41E-25 T 11-10-2018 AMS64_16710 94d54810e94e6a1d89cafe297c4ad45c 1036 SUPERFAMILY SSF82693 38 133 4.01E-28 T 11-10-2018 AMS64_02650 47a5c1b39e4a098cd59adca392917c2a 280 SUPERFAMILY SSF103481 184 279 3.01E-13 T 11-10-2018 AMS64_02650 47a5c1b39e4a098cd59adca392917c2a 280 SUPERFAMILY SSF103481 37 136 2.88E-11 T 11-10-2018 AMS64_02650 47a5c1b39e4a098cd59adca392917c2a 280 Pfam PF00892 EamA-like transporter family 144 276 1.4E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_11620 c19160c7209f3b869e9f069ffd6e1b69 427 Pfam PF12404 Peptidase 1 76 1.2E-26 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AMS64_11620 c19160c7209f3b869e9f069ffd6e1b69 427 Gene3D G3DSA:3.40.630.10 91 425 1.1E-96 T 11-10-2018 AMS64_11620 c19160c7209f3b869e9f069ffd6e1b69 427 PIRSF PIRSF036388 1 427 3.6E-183 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AMS64_11620 c19160c7209f3b869e9f069ffd6e1b69 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 270 277 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMS64_11620 c19160c7209f3b869e9f069ffd6e1b69 427 PRINTS PR00481 Cytosol aminopeptidase signature 266 286 3.3E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_11620 c19160c7209f3b869e9f069ffd6e1b69 427 PRINTS PR00481 Cytosol aminopeptidase signature 294 309 3.3E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_11620 c19160c7209f3b869e9f069ffd6e1b69 427 PRINTS PR00481 Cytosol aminopeptidase signature 207 228 3.3E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_11620 c19160c7209f3b869e9f069ffd6e1b69 427 PRINTS PR00481 Cytosol aminopeptidase signature 244 265 3.3E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_11620 c19160c7209f3b869e9f069ffd6e1b69 427 PRINTS PR00481 Cytosol aminopeptidase signature 185 202 3.3E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_11620 c19160c7209f3b869e9f069ffd6e1b69 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 104 418 4.7E-92 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMS64_11620 c19160c7209f3b869e9f069ffd6e1b69 427 SUPERFAMILY SSF53187 103 423 3.45E-91 T 11-10-2018 AMS64_11955 6fc3300c09286e242febfb57e3ae153d 536 Gene3D G3DSA:3.40.50.150 26 295 4.7E-38 T 11-10-2018 AMS64_11955 6fc3300c09286e242febfb57e3ae153d 536 SUPERFAMILY SSF53335 30 272 1.52E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_11955 6fc3300c09286e242febfb57e3ae153d 536 Pfam PF02384 N-6 DNA Methylase 39 278 7.2E-16 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AMS64_11955 6fc3300c09286e242febfb57e3ae153d 536 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 163 175 1.6E-15 T 11-10-2018 AMS64_11955 6fc3300c09286e242febfb57e3ae153d 536 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 196 220 1.6E-15 T 11-10-2018 AMS64_11955 6fc3300c09286e242febfb57e3ae153d 536 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 71 85 1.6E-15 T 11-10-2018 AMS64_11955 6fc3300c09286e242febfb57e3ae153d 536 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 43 59 1.6E-15 T 11-10-2018 AMS64_11955 6fc3300c09286e242febfb57e3ae153d 536 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 166 172 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMS64_22035 bcf0485218af5669157e0e11f2cf4746 88 SUPERFAMILY SSF47413 20 73 7.51E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_22035 bcf0485218af5669157e0e11f2cf4746 88 Pfam PF01381 Helix-turn-helix 20 64 3.5E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_22035 bcf0485218af5669157e0e11f2cf4746 88 Gene3D G3DSA:1.10.260.40 10 86 2.4E-13 T 11-10-2018 AMS64_14320 fd3e6e221ad3705f54c706397a5cfbdd 407 Pfam PF07690 Major Facilitator Superfamily 16 353 1.0E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_14320 fd3e6e221ad3705f54c706397a5cfbdd 407 SUPERFAMILY SSF103473 6 392 1.06E-54 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_14320 fd3e6e221ad3705f54c706397a5cfbdd 407 Gene3D G3DSA:1.20.1250.20 7 387 5.7E-49 T 11-10-2018 AMS64_16260 50fca048794b794bc6005225fe22ca0a 424 Gene3D G3DSA:3.90.1150.10 9 411 4.3E-170 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_16260 50fca048794b794bc6005225fe22ca0a 424 Gene3D G3DSA:3.40.640.10 59 328 4.3E-170 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_16260 50fca048794b794bc6005225fe22ca0a 424 SUPERFAMILY SSF53383 4 421 1.91E-130 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_16260 50fca048794b794bc6005225fe22ca0a 424 Pfam PF00202 Aminotransferase class-III 25 419 4.2E-129 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_16260 50fca048794b794bc6005225fe22ca0a 424 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 11 419 6.6E-182 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AMS64_16260 50fca048794b794bc6005225fe22ca0a 424 PIRSF PIRSF000521 22 421 8.0E-29 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_16260 50fca048794b794bc6005225fe22ca0a 424 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 422 50.025 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AMS64_16260 50fca048794b794bc6005225fe22ca0a 424 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 240 277 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_22250 2919484bc8f9528b8435919a378c0773 308 Pfam PF00696 Amino acid kinase family 5 275 5.0E-27 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMS64_22250 2919484bc8f9528b8435919a378c0773 308 PIRSF PIRSF000723 2 302 1.5E-112 T 11-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMS64_22250 2919484bc8f9528b8435919a378c0773 308 TIGRFAM TIGR00746 arcC: carbamate kinase 5 301 2.1E-119 T 11-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMS64_22250 2919484bc8f9528b8435919a378c0773 308 SUPERFAMILY SSF53633 5 300 1.06E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_22250 2919484bc8f9528b8435919a378c0773 308 Gene3D G3DSA:3.40.1160.10 1 303 3.1E-113 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_22250 2919484bc8f9528b8435919a378c0773 308 PRINTS PR01469 Bacterial carbamate kinase signature 105 124 5.1E-62 T 11-10-2018 AMS64_22250 2919484bc8f9528b8435919a378c0773 308 PRINTS PR01469 Bacterial carbamate kinase signature 176 194 5.1E-62 T 11-10-2018 AMS64_22250 2919484bc8f9528b8435919a378c0773 308 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 5.1E-62 T 11-10-2018 AMS64_22250 2919484bc8f9528b8435919a378c0773 308 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 5.1E-62 T 11-10-2018 AMS64_22250 2919484bc8f9528b8435919a378c0773 308 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 5.1E-62 T 11-10-2018 AMS64_22250 2919484bc8f9528b8435919a378c0773 308 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 5.1E-62 T 11-10-2018 AMS64_22250 2919484bc8f9528b8435919a378c0773 308 PRINTS PR01469 Bacterial carbamate kinase signature 153 172 5.1E-62 T 11-10-2018 AMS64_07020 f03bfed27c01d75382b1c194acbe1b1c 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 271 2.4E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_07020 f03bfed27c01d75382b1c194acbe1b1c 306 Gene3D G3DSA:1.10.3720.10 62 276 2.5E-14 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_07020 f03bfed27c01d75382b1c194acbe1b1c 306 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 52 1.2E-5 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMS64_07020 f03bfed27c01d75382b1c194acbe1b1c 306 SUPERFAMILY SSF161098 70 256 1.03E-17 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 SMART SM00278 562 581 0.06 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 SMART SM00278 594 613 5.3 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 613 28.884 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 Pfam PF02151 UvrB/uvrC motif 209 242 6.9E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 Pfam PF01541 GIY-YIG catalytic domain 22 97 1.4E-12 T 11-10-2018 IPR000305 GIY-YIG endonuclease AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 SMART SM00465 21 102 4.4E-22 T 11-10-2018 IPR000305 GIY-YIG endonuclease AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 SUPERFAMILY SSF82771 21 104 9.02E-24 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 Gene3D G3DSA:3.40.1440.10 10 106 6.0E-32 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 Gene3D G3DSA:1.10.150.20 561 615 2.8E-24 T 11-10-2018 AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 Pfam PF14520 Helix-hairpin-helix domain 563 614 2.6E-10 T 11-10-2018 AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 390 548 1.7E-45 T 11-10-2018 IPR001162 UvrC family homology region AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 SUPERFAMILY SSF46600 194 247 3.01E-13 T 11-10-2018 IPR036876 UVR domain superfamily AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 SUPERFAMILY SSF47781 527 615 3.18E-24 T 11-10-2018 IPR010994 RuvA domain 2-like AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 Gene3D G3DSA:3.30.420.340 383 558 7.5E-47 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily AMS64_12330 834d68dd293eaff1add0ad889361cb79 617 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 14 595 2.7E-207 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AMS64_17760 8f250084a4593080edfd081eb8feec7a 710 SUPERFAMILY SSF55904 567 708 1.19E-41 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 AMS64_17760 8f250084a4593080edfd081eb8feec7a 710 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.9E-186 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AMS64_17760 8f250084a4593080edfd081eb8feec7a 710 PIRSF PIRSF009393 1 710 2.1E-283 T 11-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AMS64_17760 8f250084a4593080edfd081eb8feec7a 710 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 3.3E-43 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AMS64_17760 8f250084a4593080edfd081eb8feec7a 710 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AMS64_17760 8f250084a4593080edfd081eb8feec7a 710 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 2.8E-30 T 11-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AMS64_17760 8f250084a4593080edfd081eb8feec7a 710 SUPERFAMILY SSF53383 130 562 6.78E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_17760 8f250084a4593080edfd081eb8feec7a 710 Gene3D G3DSA:3.40.50.2300 1 129 9.4E-49 T 11-10-2018 AMS64_17760 8f250084a4593080edfd081eb8feec7a 710 Gene3D G3DSA:3.40.640.10 130 424 6.0E-90 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_17760 8f250084a4593080edfd081eb8feec7a 710 Gene3D G3DSA:3.90.100.10 595 710 1.6E-42 T 11-10-2018 AMS64_17760 8f250084a4593080edfd081eb8feec7a 710 Gene3D G3DSA:3.90.1150.10 425 594 1.4E-70 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_14615 f332c579a5c01f16459ed1fad103727e 308 Gene3D G3DSA:1.20.1510.10 15 219 6.2E-26 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMS64_14615 f332c579a5c01f16459ed1fad103727e 308 Pfam PF01545 Cation efflux family 19 217 8.8E-33 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMS64_14615 f332c579a5c01f16459ed1fad103727e 308 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 246 9.9E-25 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMS64_14615 f332c579a5c01f16459ed1fad103727e 308 SUPERFAMILY SSF161111 15 219 7.59E-35 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMS64_05775 e223a826047f7047e36ac926e33e58bb 286 Gene3D G3DSA:3.10.450.240 163 285 1.2E-11 T 11-10-2018 AMS64_05775 e223a826047f7047e36ac926e33e58bb 286 SUPERFAMILY SSF54427 163 285 4.49E-21 T 11-10-2018 IPR032710 NTF2-like domain superfamily AMS64_05775 e223a826047f7047e36ac926e33e58bb 286 Pfam PF04280 Tim44-like domain 164 285 4.0E-18 T 11-10-2018 IPR007379 Tim44-like domain AMS64_05775 e223a826047f7047e36ac926e33e58bb 286 SMART SM00978 156 285 1.9E-34 T 11-10-2018 IPR007379 Tim44-like domain AMS64_05980 a06357174870826f4115beea8e26b47d 314 Pfam PF01584 CheW-like domain 21 159 2.1E-35 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_05980 a06357174870826f4115beea8e26b47d 314 Gene3D G3DSA:3.40.50.2300 170 314 9.4E-22 T 11-10-2018 AMS64_05980 a06357174870826f4115beea8e26b47d 314 SMART SM00260 17 157 5.0E-25 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_05980 a06357174870826f4115beea8e26b47d 314 Pfam PF00072 Response regulator receiver domain 185 298 2.6E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_05980 a06357174870826f4115beea8e26b47d 314 PIRSF PIRSF002867 1 312 2.1E-101 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AMS64_05980 a06357174870826f4115beea8e26b47d 314 SUPERFAMILY SSF52172 178 309 7.54E-23 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_05980 a06357174870826f4115beea8e26b47d 314 SMART SM00448 183 304 8.4E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_05980 a06357174870826f4115beea8e26b47d 314 SUPERFAMILY SSF50341 16 161 2.75E-34 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMS64_05980 a06357174870826f4115beea8e26b47d 314 Gene3D G3DSA:2.30.30.40 24 142 7.8E-27 T 11-10-2018 AMS64_05980 a06357174870826f4115beea8e26b47d 314 Gene3D G3DSA:2.40.50.180 41 107 7.8E-27 T 11-10-2018 AMS64_18990 f372e7398369cd5de394825e3396c6f4 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 262 273 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMS64_18990 f372e7398369cd5de394825e3396c6f4 650 Gene3D G3DSA:3.30.300.30 519 650 2.9E-31 T 11-10-2018 AMS64_18990 f372e7398369cd5de394825e3396c6f4 650 SUPERFAMILY SSF56801 8 644 3.92E-184 T 11-10-2018 AMS64_18990 f372e7398369cd5de394825e3396c6f4 650 Gene3D G3DSA:3.40.50.12780 50 516 2.5E-107 T 11-10-2018 AMS64_18990 f372e7398369cd5de394825e3396c6f4 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 53.727 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AMS64_18990 f372e7398369cd5de394825e3396c6f4 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 22 644 0.0 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AMS64_18990 f372e7398369cd5de394825e3396c6f4 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 1.6E-21 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AMS64_18990 f372e7398369cd5de394825e3396c6f4 650 Pfam PF00501 AMP-binding enzyme 83 523 2.9E-94 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMS64_18990 f372e7398369cd5de394825e3396c6f4 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 3.8E-26 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMS64_16530 cef82c1456dda533c71546e30c6eab40 657 SUPERFAMILY SSF52540 10 235 1.82E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_16530 cef82c1456dda533c71546e30c6eab40 657 Pfam PF02687 FtsX-like permease family 562 650 2.0E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMS64_16530 cef82c1456dda533c71546e30c6eab40 657 SMART SM00382 39 226 2.2E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_16530 cef82c1456dda533c71546e30c6eab40 657 Gene3D G3DSA:3.40.50.300 9 273 4.3E-67 T 11-10-2018 AMS64_16530 cef82c1456dda533c71546e30c6eab40 657 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_16530 cef82c1456dda533c71546e30c6eab40 657 Pfam PF00005 ABC transporter 30 178 1.0E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_16530 cef82c1456dda533c71546e30c6eab40 657 Pfam PF12704 MacB-like periplasmic core domain 282 499 6.6E-39 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AMS64_11450 18431dac65cbbff8ed085c315eee57db 442 Pfam PF00696 Amino acid kinase family 26 266 4.8E-26 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMS64_11450 18431dac65cbbff8ed085c315eee57db 442 Gene3D G3DSA:3.40.1160.10 7 293 1.6E-84 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_11450 18431dac65cbbff8ed085c315eee57db 442 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 440 7.7E-192 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AMS64_11450 18431dac65cbbff8ed085c315eee57db 442 PIRSF PIRSF000423 1 441 9.1E-200 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AMS64_11450 18431dac65cbbff8ed085c315eee57db 442 SUPERFAMILY SSF55729 298 419 4.05E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_11450 18431dac65cbbff8ed085c315eee57db 442 SUPERFAMILY SSF53633 5 292 1.96E-65 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_11450 18431dac65cbbff8ed085c315eee57db 442 Gene3D G3DSA:3.40.630.30 296 442 4.2E-32 T 11-10-2018 AMS64_11450 18431dac65cbbff8ed085c315eee57db 442 Pfam PF00583 Acetyltransferase (GNAT) family 335 412 3.9E-9 T 11-10-2018 IPR000182 GNAT domain AMS64_11450 18431dac65cbbff8ed085c315eee57db 442 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 222.141 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AMS64_09955 920e78cccfdd287b96ad617daf3dceaf 427 Gene3D G3DSA:3.60.120.10 1 425 1.4E-158 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AMS64_09955 920e78cccfdd287b96ad617daf3dceaf 427 SUPERFAMILY SSF56322 1 424 5.76E-136 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AMS64_09955 920e78cccfdd287b96ad617daf3dceaf 427 Pfam PF00425 chorismate binding enzyme 162 416 2.3E-95 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AMS64_09955 920e78cccfdd287b96ad617daf3dceaf 427 PRINTS PR00095 Anthranilate synthase component I signature 278 291 1.5E-17 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_09955 920e78cccfdd287b96ad617daf3dceaf 427 PRINTS PR00095 Anthranilate synthase component I signature 264 277 1.5E-17 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_09955 920e78cccfdd287b96ad617daf3dceaf 427 PRINTS PR00095 Anthranilate synthase component I signature 358 372 1.5E-17 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_09955 920e78cccfdd287b96ad617daf3dceaf 427 PRINTS PR00095 Anthranilate synthase component I signature 373 387 1.5E-17 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_09955 920e78cccfdd287b96ad617daf3dceaf 427 Pfam PF04715 Anthranilate synthase component I, N terminal region 1 114 3.8E-18 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_09955 920e78cccfdd287b96ad617daf3dceaf 427 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 77 420 1.1E-122 T 11-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AMS64_11580 afaf42160d3509162aad6a8a2ffeb3f7 394 SMART SM00564 290 321 18.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMS64_11580 afaf42160d3509162aad6a8a2ffeb3f7 394 SMART SM00564 331 362 0.085 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMS64_11580 afaf42160d3509162aad6a8a2ffeb3f7 394 SMART SM00564 155 187 0.0037 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMS64_11580 afaf42160d3509162aad6a8a2ffeb3f7 394 SMART SM00564 252 283 15.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMS64_11580 afaf42160d3509162aad6a8a2ffeb3f7 394 SMART SM00564 66 97 1.2E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMS64_11580 afaf42160d3509162aad6a8a2ffeb3f7 394 SMART SM00564 116 147 2.7E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMS64_11580 afaf42160d3509162aad6a8a2ffeb3f7 394 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 393 38.048 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB AMS64_11580 afaf42160d3509162aad6a8a2ffeb3f7 394 Gene3D G3DSA:2.130.10.10 22 392 4.4E-99 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMS64_11580 afaf42160d3509162aad6a8a2ffeb3f7 394 Pfam PF13360 PQQ-like domain 329 391 2.7E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMS64_11580 afaf42160d3509162aad6a8a2ffeb3f7 394 Pfam PF13360 PQQ-like domain 79 319 1.6E-52 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMS64_11580 afaf42160d3509162aad6a8a2ffeb3f7 394 SUPERFAMILY SSF50998 34 390 6.54E-78 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMS64_11580 afaf42160d3509162aad6a8a2ffeb3f7 394 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 391 1.0E-131 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB AMS64_07405 67797b47b4419d06fe922a949bf26bf0 306 Gene3D G3DSA:3.30.1330.60 110 260 6.3E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_07405 67797b47b4419d06fe922a949bf26bf0 306 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 8 58 9.5E-17 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain AMS64_07405 67797b47b4419d06fe922a949bf26bf0 306 SUPERFAMILY SSF103088 140 255 2.49E-28 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_07405 67797b47b4419d06fe922a949bf26bf0 306 Pfam PF00691 OmpA family 151 249 3.8E-18 T 11-10-2018 IPR006665 OmpA-like domain AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 Gene3D G3DSA:3.10.20.30 510 600 1.4E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 551 559 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 473 481 9.9E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 308 318 9.9E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 385 404 9.9E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 327 334 9.9E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 Pfam PF03476 MOSC N-terminal beta barrel domain 2 115 5.8E-23 T 11-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 Pfam PF00175 Oxidoreductase NAD-binding domain 386 486 3.2E-12 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 SUPERFAMILY SSF63380 270 378 5.62E-27 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 528 593 9.5E-12 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 SUPERFAMILY SSF54292 496 600 3.15E-25 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 SUPERFAMILY SSF52343 380 506 2.88E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 Pfam PF00970 Oxidoreductase FAD-binding domain 283 377 1.0E-12 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 SUPERFAMILY SSF141673 4 131 1.57E-29 T 11-10-2018 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 Pfam PF03473 MOSC domain 136 260 2.1E-27 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 Gene3D G3DSA:2.40.30.10 275 377 7.5E-26 T 11-10-2018 AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 SUPERFAMILY SSF50800 2 262 3.14E-16 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMS64_16225 b508f267c5274a2a7a4ef8bc60e5addc 600 Gene3D G3DSA:3.40.50.80 379 506 8.8E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_11540 c37a16b12bb4e24c0776f2de1e9d9858 373 Gene3D G3DSA:3.30.1370.170 293 372 9.8E-23 T 11-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 AMS64_11540 c37a16b12bb4e24c0776f2de1e9d9858 373 Gene3D G3DSA:3.40.50.720 93 257 2.1E-102 T 11-10-2018 AMS64_11540 c37a16b12bb4e24c0776f2de1e9d9858 373 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 276 3.7E-15 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMS64_11540 c37a16b12bb4e24c0776f2de1e9d9858 373 SUPERFAMILY SSF51735 93 257 2.67E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_11540 c37a16b12bb4e24c0776f2de1e9d9858 373 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 43.834 T 11-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 AMS64_11540 c37a16b12bb4e24c0776f2de1e9d9858 373 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 256 7.2E-24 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMS64_11540 c37a16b12bb4e24c0776f2de1e9d9858 373 Gene3D G3DSA:3.40.50.720 1 277 2.1E-102 T 11-10-2018 AMS64_11540 c37a16b12bb4e24c0776f2de1e9d9858 373 SUPERFAMILY SSF52283 4 102 6.17E-19 T 11-10-2018 AMS64_11540 c37a16b12bb4e24c0776f2de1e9d9858 373 Pfam PF11890 Domain of unknown function (DUF3410) 289 361 1.6E-22 T 11-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 SUPERFAMILY SSF47384 777 858 3.14E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 282 494 6.4E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Gene3D G3DSA:1.10.287.130 768 855 2.3E-22 T 11-10-2018 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 SMART SM00062 281 498 3.6E-11 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 SMART SM00062 49 258 1.7E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 SUPERFAMILY SSF53850 279 497 4.97E-30 T 11-10-2018 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Gene3D G3DSA:3.40.50.2300 1101 1231 1.0E-34 T 11-10-2018 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 SUPERFAMILY SSF47226 1204 1301 8.64E-10 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Pfam PF01627 Hpt domain 1244 1315 7.8E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Pfam PF08447 PAS fold 682 756 4.0E-7 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Gene3D G3DSA:3.40.190.10 271 494 8.8E-39 T 11-10-2018 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 SUPERFAMILY SSF52172 1106 1225 1.12E-33 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Gene3D G3DSA:3.40.190.10 41 246 1.4E-19 T 11-10-2018 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 PRINTS PR00344 Bacterial sensor protein C-terminal signature 975 993 3.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 PRINTS PR00344 Bacterial sensor protein C-terminal signature 999 1012 3.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 PRINTS PR00344 Bacterial sensor protein C-terminal signature 940 954 3.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Gene3D G3DSA:3.40.190.10 366 457 8.8E-39 T 11-10-2018 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 SMART SM00387 904 1015 2.3E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Gene3D G3DSA:3.30.565.10 857 1019 1.9E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Gene3D G3DSA:3.30.450.20 646 767 4.0E-15 T 11-10-2018 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 SUPERFAMILY SSF53850 53 257 1.15E-17 T 11-10-2018 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 SMART SM00388 792 857 3.9E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Pfam PF00512 His Kinase A (phospho-acceptor) domain 792 856 1.8E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Gene3D G3DSA:1.20.120.160 1235 1326 2.2E-10 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Gene3D G3DSA:3.40.190.10 131 217 1.4E-19 T 11-10-2018 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 905 1014 1.4E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 SUPERFAMILY SSF55874 846 1016 7.07E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 SMART SM00448 1107 1220 2.9E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Pfam PF00072 Response regulator receiver domain 1109 1220 2.0E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 SUPERFAMILY SSF55785 640 770 9.42E-12 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_09345 14f5064f8211a19b3bf3cc2686abe322 1329 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 86 253 2.1E-9 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_00040 76a82a8bf4432edf7c34f5247d4df596 375 SUPERFAMILY SSF50129 5 191 4.72E-77 T 11-10-2018 IPR011032 GroES-like superfamily AMS64_00040 76a82a8bf4432edf7c34f5247d4df596 375 SUPERFAMILY SSF50129 325 375 3.34E-13 T 11-10-2018 IPR011032 GroES-like superfamily AMS64_00040 76a82a8bf4432edf7c34f5247d4df596 375 Gene3D G3DSA:3.90.180.10 12 370 4.3E-159 T 11-10-2018 AMS64_00040 76a82a8bf4432edf7c34f5247d4df596 375 SUPERFAMILY SSF51735 166 340 4.37E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_00040 76a82a8bf4432edf7c34f5247d4df596 375 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMS64_00040 76a82a8bf4432edf7c34f5247d4df596 375 SMART SM00829 18 373 0.0011 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMS64_00040 76a82a8bf4432edf7c34f5247d4df596 375 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 8 375 3.3E-227 T 11-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AMS64_00040 76a82a8bf4432edf7c34f5247d4df596 375 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 157 3.8E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMS64_00040 76a82a8bf4432edf7c34f5247d4df596 375 Gene3D G3DSA:3.40.50.720 180 318 4.3E-159 T 11-10-2018 AMS64_00040 76a82a8bf4432edf7c34f5247d4df596 375 Pfam PF00107 Zinc-binding dehydrogenase 203 334 1.9E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMS64_05635 990d2cbaac9e44452f69337103aeb519 302 SUPERFAMILY SSF110581 4 301 6.54E-118 T 11-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMS64_05635 990d2cbaac9e44452f69337103aeb519 302 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 10 302 43.947 T 11-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMS64_05635 990d2cbaac9e44452f69337103aeb519 302 Gene3D G3DSA:3.40.1790.10 2 302 1.6E-141 T 11-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMS64_05635 990d2cbaac9e44452f69337103aeb519 302 Pfam PF04227 Indigoidine synthase A like protein 11 300 1.8E-136 T 11-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMS64_17965 e7cc797effb0c6f2900a647a2b0384ad 1159 Gene3D G3DSA:2.40.50.140 983 1072 1.6E-7 T 11-10-2018 AMS64_17965 e7cc797effb0c6f2900a647a2b0384ad 1159 SUPERFAMILY SSF89550 6 263 1.49E-12 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMS64_17965 e7cc797effb0c6f2900a647a2b0384ad 1159 Pfam PF02811 PHP domain 8 171 6.0E-42 T 11-10-2018 IPR004013 PHP domain GO:0003824 AMS64_17965 e7cc797effb0c6f2900a647a2b0384ad 1159 Pfam PF01336 OB-fold nucleic acid binding domain 996 1069 1.2E-8 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMS64_17965 e7cc797effb0c6f2900a647a2b0384ad 1159 Pfam PF14579 Helix-hairpin-helix motif 808 897 1.3E-25 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_17965 e7cc797effb0c6f2900a647a2b0384ad 1159 Gene3D G3DSA:3.20.20.140 1 270 3.0E-92 T 11-10-2018 AMS64_17965 e7cc797effb0c6f2900a647a2b0384ad 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_17965 e7cc797effb0c6f2900a647a2b0384ad 1159 SMART SM00481 7 74 1.3E-23 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMS64_17965 e7cc797effb0c6f2900a647a2b0384ad 1159 Gene3D G3DSA:1.10.10.1600 433 510 3.7E-34 T 11-10-2018 AMS64_17965 e7cc797effb0c6f2900a647a2b0384ad 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 8.5E-176 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 Pfam PF00512 His Kinase A (phospho-acceptor) domain 790 856 2.0E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 Pfam PF00072 Response regulator receiver domain 1034 1144 8.0E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 SUPERFAMILY SSF55785 626 743 6.46E-9 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 SMART SM00388 790 856 1.3E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 PRINTS PR00344 Bacterial sensor protein C-terminal signature 954 964 4.5E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 PRINTS PR00344 Bacterial sensor protein C-terminal signature 971 989 4.5E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 PRINTS PR00344 Bacterial sensor protein C-terminal signature 936 950 4.5E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 PRINTS PR00344 Bacterial sensor protein C-terminal signature 995 1008 4.5E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 Gene3D G3DSA:1.10.287.130 751 854 4.5E-15 T 11-10-2018 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 SUPERFAMILY SSF47384 774 857 1.29E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 901 1010 4.5E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 Pfam PF12860 PAS fold 636 749 5.2E-46 T 11-10-2018 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 Gene3D G3DSA:3.30.565.10 861 1013 1.2E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 SUPERFAMILY SSF55874 846 1009 7.2E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 Gene3D G3DSA:3.40.50.2300 1028 1151 3.0E-15 T 11-10-2018 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 Gene3D G3DSA:3.30.450.20 618 750 3.7E-11 T 11-10-2018 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 SUPERFAMILY SSF52172 1032 1149 3.56E-16 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 SMART SM00448 1032 1145 1.7E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_05910 84c6f39da92b47219ed9c9b22afbcc51 1151 SMART SM00387 900 1011 1.5E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_05840 8caccfba1b06684722e111af10d252ac 184 Pfam PF00857 Isochorismatase family 3 148 4.1E-36 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AMS64_05840 8caccfba1b06684722e111af10d252ac 184 Gene3D G3DSA:3.40.50.850 2 159 2.4E-44 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMS64_05840 8caccfba1b06684722e111af10d252ac 184 SUPERFAMILY SSF52499 3 176 2.49E-44 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMS64_21050 9b5e5c0b6cc5ebb2cb5363d7c74d0405 541 Gene3D G3DSA:3.90.228.20 236 526 8.0E-236 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AMS64_21050 9b5e5c0b6cc5ebb2cb5363d7c74d0405 541 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 13 541 8.0E-279 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMS64_21050 9b5e5c0b6cc5ebb2cb5363d7c74d0405 541 Gene3D G3DSA:2.170.8.10 50 351 8.0E-236 T 11-10-2018 AMS64_21050 9b5e5c0b6cc5ebb2cb5363d7c74d0405 541 PIRSF PIRSF006294 6 541 4.2E-227 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMS64_21050 9b5e5c0b6cc5ebb2cb5363d7c74d0405 541 Pfam PF01293 Phosphoenolpyruvate carboxykinase 25 491 4.7E-211 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMS64_21050 9b5e5c0b6cc5ebb2cb5363d7c74d0405 541 SUPERFAMILY SSF53795 230 541 6.87E-128 T 11-10-2018 AMS64_21050 9b5e5c0b6cc5ebb2cb5363d7c74d0405 541 SUPERFAMILY SSF68923 12 228 2.44E-89 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AMS64_21050 9b5e5c0b6cc5ebb2cb5363d7c74d0405 541 Gene3D G3DSA:3.40.449.10 26 235 8.0E-236 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AMS64_21050 9b5e5c0b6cc5ebb2cb5363d7c74d0405 541 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 11-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMS64_21050 9b5e5c0b6cc5ebb2cb5363d7c74d0405 541 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 19 539 54.859 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMS64_07475 b2ad919ca73202028ba8c1248d8ffddf 270 PRINTS PR01805 VacJ lipoprotein signature 67 83 7.1E-21 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AMS64_07475 b2ad919ca73202028ba8c1248d8ffddf 270 PRINTS PR01805 VacJ lipoprotein signature 49 62 7.1E-21 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AMS64_07475 b2ad919ca73202028ba8c1248d8ffddf 270 PRINTS PR01805 VacJ lipoprotein signature 118 135 7.1E-21 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AMS64_07475 b2ad919ca73202028ba8c1248d8ffddf 270 PRINTS PR01805 VacJ lipoprotein signature 154 171 7.1E-21 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AMS64_07475 b2ad919ca73202028ba8c1248d8ffddf 270 Pfam PF04333 MlaA lipoprotein 48 238 2.5E-61 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AMS64_07460 78dfaacc1cbaf30f48a8e9db860c9513 176 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 9 173 4.6E-61 T 11-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AMS64_07460 78dfaacc1cbaf30f48a8e9db860c9513 176 ProSitePatterns PS00194 Thioredoxin family active site. 68 86 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMS64_07460 78dfaacc1cbaf30f48a8e9db860c9513 176 Gene3D G3DSA:3.40.30.10 24 176 4.2E-41 T 11-10-2018 AMS64_07460 78dfaacc1cbaf30f48a8e9db860c9513 176 SUPERFAMILY SSF52833 43 173 5.81E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_07460 78dfaacc1cbaf30f48a8e9db860c9513 176 Pfam PF08534 Redoxin 38 161 2.7E-20 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMS64_14725 382008928fd8dae97843aa48f83bf7a2 259 SMART SM00062 27 255 3.9E-69 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_14725 382008928fd8dae97843aa48f83bf7a2 259 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 8 252 6.3E-85 T 11-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 AMS64_14725 382008928fd8dae97843aa48f83bf7a2 259 Gene3D G3DSA:3.40.190.10 113 212 4.7E-76 T 11-10-2018 AMS64_14725 382008928fd8dae97843aa48f83bf7a2 259 SUPERFAMILY SSF53850 1 256 1.21E-69 T 11-10-2018 AMS64_14725 382008928fd8dae97843aa48f83bf7a2 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 253 5.2E-64 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_14725 382008928fd8dae97843aa48f83bf7a2 259 Gene3D G3DSA:3.40.190.10 29 251 4.7E-76 T 11-10-2018 AMS64_14725 382008928fd8dae97843aa48f83bf7a2 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AMS64_14725 382008928fd8dae97843aa48f83bf7a2 259 SMART SM00079 27 254 2.4E-4 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 Gene3D G3DSA:1.10.1740.10 2 85 1.1E-28 T 11-10-2018 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 Pfam PF04542 Sigma-70 region 2 16 88 5.4E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 234 2.8E-31 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 SUPERFAMILY SSF88946 15 88 7.72E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 PIRSF PIRSF000770 3 238 1.1E-33 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 Pfam PF04539 Sigma-70 region 3 98 139 4.5E-8 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 Gene3D G3DSA:1.20.140.160 87 236 5.5E-42 T 11-10-2018 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 PRINTS PR00046 Major sigma-70 factor signature 219 230 1.8E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 PRINTS PR00046 Major sigma-70 factor signature 204 219 1.8E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 PRINTS PR00046 Major sigma-70 factor signature 43 56 1.8E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 PRINTS PR00046 Major sigma-70 factor signature 187 199 1.8E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 SUPERFAMILY SSF88659 89 154 3.92E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 SUPERFAMILY SSF88659 166 238 6.54E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 204 230 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 Pfam PF04545 Sigma-70, region 4 185 232 1.2E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 237 63.151 T 11-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMS64_07375 e86a0959ae29ca6ae4712b1034f40efa 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 234 8.1E-81 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMS64_02015 176d67c8635138934312e5176a96fce4 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 98 20.354 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02015 176d67c8635138934312e5176a96fce4 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_02015 176d67c8635138934312e5176a96fce4 105 SUPERFAMILY SSF50104 4 102 4.59E-35 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMS64_02015 176d67c8635138934312e5176a96fce4 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 102 1.6E-25 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02015 176d67c8635138934312e5176a96fce4 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 4.9E-40 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02015 176d67c8635138934312e5176a96fce4 105 Gene3D G3DSA:2.30.30.30 2 105 1.6E-39 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMS64_08765 76170f69f4097fae8cb2d5bd548e2e2e 392 SUPERFAMILY SSF52440 2 110 6.33E-33 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMS64_08765 76170f69f4097fae8cb2d5bd548e2e2e 392 Gene3D G3DSA:3.30.1490.20 121 194 1.9E-30 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMS64_08765 76170f69f4097fae8cb2d5bd548e2e2e 392 Pfam PF02222 ATP-grasp domain 121 293 3.0E-56 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AMS64_08765 76170f69f4097fae8cb2d5bd548e2e2e 392 Gene3D G3DSA:3.40.50.20 1 120 9.0E-51 T 11-10-2018 AMS64_08765 76170f69f4097fae8cb2d5bd548e2e2e 392 Gene3D G3DSA:3.30.470.20 195 390 1.3E-60 T 11-10-2018 AMS64_08765 76170f69f4097fae8cb2d5bd548e2e2e 392 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 391 52.054 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AMS64_08765 76170f69f4097fae8cb2d5bd548e2e2e 392 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 79 6.4E-5 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMS64_08765 76170f69f4097fae8cb2d5bd548e2e2e 392 SUPERFAMILY SSF51246 317 390 4.39E-18 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMS64_08765 76170f69f4097fae8cb2d5bd548e2e2e 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 390 4.4E-184 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AMS64_08765 76170f69f4097fae8cb2d5bd548e2e2e 392 SUPERFAMILY SSF56059 111 312 1.34E-57 T 11-10-2018 AMS64_14795 f4cce7051d0707fd2b839b5687f83af9 550 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 333 537 6.5E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_14795 f4cce7051d0707fd2b839b5687f83af9 550 SUPERFAMILY SSF160964 19 295 2.75E-66 T 11-10-2018 AMS64_14795 f4cce7051d0707fd2b839b5687f83af9 550 Gene3D G3DSA:3.10.650.10 103 304 1.1E-31 T 11-10-2018 AMS64_14795 f4cce7051d0707fd2b839b5687f83af9 550 Gene3D G3DSA:2.40.430.10 124 227 1.1E-31 T 11-10-2018 AMS64_14795 f4cce7051d0707fd2b839b5687f83af9 550 Gene3D G3DSA:1.10.3720.10 305 548 2.6E-70 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_14795 f4cce7051d0707fd2b839b5687f83af9 550 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 105 295 1.1E-49 T 11-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain AMS64_14795 f4cce7051d0707fd2b839b5687f83af9 550 Gene3D G3DSA:1.20.58.370 11 100 5.0E-36 T 11-10-2018 IPR035277 MalF, N-terminal AMS64_14795 f4cce7051d0707fd2b839b5687f83af9 550 SUPERFAMILY SSF161098 296 538 5.63E-60 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_17665 2b51852315a719086821f3528da77888 494 Pfam PF01471 Putative peptidoglycan binding domain 182 237 3.3E-12 T 11-10-2018 IPR002477 Peptidoglycan binding-like AMS64_17665 2b51852315a719086821f3528da77888 494 Pfam PF03734 L,D-transpeptidase catalytic domain 265 432 8.1E-31 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMS64_17665 2b51852315a719086821f3528da77888 494 SUPERFAMILY SSF141523 263 423 3.66E-21 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMS64_17665 2b51852315a719086821f3528da77888 494 SUPERFAMILY SSF47090 168 243 2.75E-16 T 11-10-2018 IPR036365 PGBD-like superfamily AMS64_10055 853f3d5319fca043d75aa1dd748af78c 422 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 13 422 3.2E-118 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMS64_10055 853f3d5319fca043d75aa1dd748af78c 422 SUPERFAMILY SSF56935 22 422 1.33E-97 T 11-10-2018 AMS64_10055 853f3d5319fca043d75aa1dd748af78c 422 Gene3D G3DSA:2.40.160.60 22 422 2.6E-128 T 11-10-2018 AMS64_03655 0a69e452a29c81b95f8058ab86ad6075 553 SUPERFAMILY SSF51011 475 552 1.08E-19 T 11-10-2018 AMS64_03655 0a69e452a29c81b95f8058ab86ad6075 553 SMART SM00642 14 414 3.0E-154 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_03655 0a69e452a29c81b95f8058ab86ad6075 553 Pfam PF11941 Domain of unknown function (DUF3459) 459 551 1.7E-9 T 11-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AMS64_03655 0a69e452a29c81b95f8058ab86ad6075 553 SUPERFAMILY SSF51445 4 472 1.61E-157 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_03655 0a69e452a29c81b95f8058ab86ad6075 553 Gene3D G3DSA:2.60.40.1180 476 553 7.3E-22 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMS64_03655 0a69e452a29c81b95f8058ab86ad6075 553 Gene3D G3DSA:3.20.20.80 1 107 4.7E-48 T 11-10-2018 AMS64_03655 0a69e452a29c81b95f8058ab86ad6075 553 Pfam PF00128 Alpha amylase, catalytic domain 29 372 1.9E-123 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_03655 0a69e452a29c81b95f8058ab86ad6075 553 Gene3D G3DSA:3.90.400.10 108 171 6.1E-31 T 11-10-2018 AMS64_03655 0a69e452a29c81b95f8058ab86ad6075 553 Gene3D G3DSA:3.20.20.80 172 475 2.2E-113 T 11-10-2018 AMS64_03655 0a69e452a29c81b95f8058ab86ad6075 553 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 6 550 8.8E-261 T 11-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 AMS64_04290 9dc5a781b67845ff8b5f14f7e19af8a0 407 Gene3D G3DSA:3.40.50.300 217 407 3.4E-49 T 11-10-2018 AMS64_04290 9dc5a781b67845ff8b5f14f7e19af8a0 407 Pfam PF00270 DEAD/DEAH box helicase 27 196 6.5E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_04290 9dc5a781b67845ff8b5f14f7e19af8a0 407 SMART SM00487 22 224 3.1E-54 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_04290 9dc5a781b67845ff8b5f14f7e19af8a0 407 SMART SM00490 261 342 2.8E-33 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_04290 9dc5a781b67845ff8b5f14f7e19af8a0 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 50.447 T 11-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 AMS64_04290 9dc5a781b67845ff8b5f14f7e19af8a0 407 Pfam PF00271 Helicase conserved C-terminal domain 234 342 1.0E-31 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_04290 9dc5a781b67845ff8b5f14f7e19af8a0 407 Gene3D G3DSA:3.40.50.300 1 211 4.0E-71 T 11-10-2018 AMS64_04290 9dc5a781b67845ff8b5f14f7e19af8a0 407 SUPERFAMILY SSF52540 75 363 7.08E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_04290 9dc5a781b67845ff8b5f14f7e19af8a0 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMS64_14965 6e83e336848e700417c5c9b9f3708461 129 Gene3D G3DSA:2.40.50.100 2 129 8.3E-53 T 11-10-2018 AMS64_14965 6e83e336848e700417c5c9b9f3708461 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 41.557 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AMS64_14965 6e83e336848e700417c5c9b9f3708461 129 SUPERFAMILY SSF51230 4 128 1.83E-45 T 11-10-2018 IPR011053 Single hybrid motif AMS64_14965 6e83e336848e700417c5c9b9f3708461 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 129 3.7E-55 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AMS64_14965 6e83e336848e700417c5c9b9f3708461 129 Pfam PF01597 Glycine cleavage H-protein 8 128 1.3E-47 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate AMS64_14965 6e83e336848e700417c5c9b9f3708461 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMS64_13135 50eaca9afb0267e1c923c920902fdb4f 1291 Gene3D G3DSA:3.40.50.10810 812 1046 9.3E-62 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AMS64_13135 50eaca9afb0267e1c923c920902fdb4f 1291 Gene3D G3DSA:3.40.50.300 1054 1250 2.3E-77 T 11-10-2018 AMS64_13135 50eaca9afb0267e1c923c920902fdb4f 1291 SMART SM00490 1154 1236 3.9E-20 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_13135 50eaca9afb0267e1c923c920902fdb4f 1291 SMART SM00487 838 1022 8.5E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_13135 50eaca9afb0267e1c923c920902fdb4f 1291 Pfam PF00271 Helicase conserved C-terminal domain 1126 1236 1.1E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_13135 50eaca9afb0267e1c923c920902fdb4f 1291 Pfam PF00176 SNF2 family N-terminal domain 851 1115 1.3E-52 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AMS64_13135 50eaca9afb0267e1c923c920902fdb4f 1291 SUPERFAMILY SSF52540 1049 1281 2.42E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_13135 50eaca9afb0267e1c923c920902fdb4f 1291 SUPERFAMILY SSF52540 827 1047 2.66E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_13135 50eaca9afb0267e1c923c920902fdb4f 1291 Gene3D G3DSA:1.20.120.850 1069 1278 2.3E-77 T 11-10-2018 AMS64_08960 32e8eba7e9221eaa625002d48eacaf0d 307 SUPERFAMILY SSF103481 188 293 1.57E-15 T 11-10-2018 AMS64_08960 32e8eba7e9221eaa625002d48eacaf0d 307 SUPERFAMILY SSF103481 42 143 1.11E-13 T 11-10-2018 AMS64_08960 32e8eba7e9221eaa625002d48eacaf0d 307 Pfam PF00892 EamA-like transporter family 11 140 3.7E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_08960 32e8eba7e9221eaa625002d48eacaf0d 307 Pfam PF00892 EamA-like transporter family 151 288 2.2E-25 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_19540 017eb7da57d8e39948789e0854212431 375 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 363 36.206 T 11-10-2018 IPR014524 Outer membrane protein assembly factor BamC AMS64_19540 017eb7da57d8e39948789e0854212431 375 Gene3D G3DSA:3.30.310.170 246 370 5.5E-28 T 11-10-2018 AMS64_19540 017eb7da57d8e39948789e0854212431 375 Gene3D G3DSA:3.30.530.50 112 232 3.8E-5 T 11-10-2018 AMS64_19540 017eb7da57d8e39948789e0854212431 375 Pfam PF06804 NlpB/DapX lipoprotein 49 362 2.0E-94 T 11-10-2018 IPR010653 NlpB/DapX lipoprotein AMS64_20245 ca9a16150931026b0542052e553ca787 162 SUPERFAMILY SSF55811 1 142 7.72E-31 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_20245 ca9a16150931026b0542052e553ca787 162 ProSitePatterns PS00893 Nudix box signature. 25 46 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMS64_20245 ca9a16150931026b0542052e553ca787 162 PRINTS PR00502 NUDIX hydrolase family signature 20 34 4.3E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMS64_20245 ca9a16150931026b0542052e553ca787 162 PRINTS PR00502 NUDIX hydrolase family signature 34 49 4.3E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMS64_20245 ca9a16150931026b0542052e553ca787 162 Gene3D G3DSA:3.90.79.10 1 147 2.2E-44 T 11-10-2018 AMS64_20245 ca9a16150931026b0542052e553ca787 162 Pfam PF00293 NUDIX domain 1 134 4.7E-24 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_20245 ca9a16150931026b0542052e553ca787 162 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 144 31.18 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH AMS64_04360 9f56ed6bba6a570fed700077b332071e 249 SUPERFAMILY SSF52096 4 248 1.29E-71 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_04360 9f56ed6bba6a570fed700077b332071e 249 Gene3D G3DSA:1.10.12.10 198 247 5.1E-6 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMS64_04360 9f56ed6bba6a570fed700077b332071e 249 Gene3D G3DSA:3.90.226.10 2 197 3.5E-62 T 11-10-2018 AMS64_04360 9f56ed6bba6a570fed700077b332071e 249 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 239 1.2E-50 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMS64_09085 ead93d45b810b750ef9bd6a3a658ddee 253 Pfam PF00977 Histidine biosynthesis protein 1 233 1.9E-74 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AMS64_09085 ead93d45b810b750ef9bd6a3a658ddee 253 SUPERFAMILY SSF51366 1 242 9.42E-64 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMS64_09085 ead93d45b810b750ef9bd6a3a658ddee 253 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.964 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AMS64_09085 ead93d45b810b750ef9bd6a3a658ddee 253 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 236 1.9E-77 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AMS64_09085 ead93d45b810b750ef9bd6a3a658ddee 253 Gene3D G3DSA:3.20.20.70 1 250 5.4E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_13335 afd00dbec7611f4ef32f5bb28399b2d8 407 Hamap MF_00550 Peptidase T [pepT]. 1 402 53.682 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AMS64_13335 afd00dbec7611f4ef32f5bb28399b2d8 407 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMS64_13335 afd00dbec7611f4ef32f5bb28399b2d8 407 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 136 175 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMS64_13335 afd00dbec7611f4ef32f5bb28399b2d8 407 Pfam PF07687 Peptidase dimerisation domain 204 304 3.0E-10 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AMS64_13335 afd00dbec7611f4ef32f5bb28399b2d8 407 PIRSF PIRSF037215 1 405 1.2E-178 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AMS64_13335 afd00dbec7611f4ef32f5bb28399b2d8 407 Gene3D G3DSA:3.40.630.10 4 398 5.5E-168 T 11-10-2018 AMS64_13335 afd00dbec7611f4ef32f5bb28399b2d8 407 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 403 3.3E-160 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AMS64_13335 afd00dbec7611f4ef32f5bb28399b2d8 407 SUPERFAMILY SSF53187 1 401 5.53E-78 T 11-10-2018 AMS64_13335 afd00dbec7611f4ef32f5bb28399b2d8 407 Gene3D G3DSA:3.30.70.360 207 317 5.5E-168 T 11-10-2018 AMS64_13335 afd00dbec7611f4ef32f5bb28399b2d8 407 Pfam PF01546 Peptidase family M20/M25/M40 137 400 7.3E-15 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMS64_13335 afd00dbec7611f4ef32f5bb28399b2d8 407 SUPERFAMILY SSF55031 207 317 2.51E-38 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMS64_07800 8314cbc6ef90db43c38ccbd21b6a5d8f 141 Gene3D G3DSA:3.30.1460.10 1 127 1.3E-39 T 11-10-2018 AMS64_07800 8314cbc6ef90db43c38ccbd21b6a5d8f 141 SUPERFAMILY SSF69635 2 127 2.67E-47 T 11-10-2018 AMS64_07800 8314cbc6ef90db43c38ccbd21b6a5d8f 141 Pfam PF05932 Tir chaperone protein (CesT) family 3 121 2.7E-23 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AMS64_07800 8314cbc6ef90db43c38ccbd21b6a5d8f 141 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 2 141 1.2E-45 T 11-10-2018 IPR013353 Type III secretion system chaperone YscB AMS64_13755 8314cbc6ef90db43c38ccbd21b6a5d8f 141 Gene3D G3DSA:3.30.1460.10 1 127 1.3E-39 T 11-10-2018 AMS64_13755 8314cbc6ef90db43c38ccbd21b6a5d8f 141 SUPERFAMILY SSF69635 2 127 2.67E-47 T 11-10-2018 AMS64_13755 8314cbc6ef90db43c38ccbd21b6a5d8f 141 Pfam PF05932 Tir chaperone protein (CesT) family 3 121 2.7E-23 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AMS64_13755 8314cbc6ef90db43c38ccbd21b6a5d8f 141 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 2 141 1.2E-45 T 11-10-2018 IPR013353 Type III secretion system chaperone YscB AMS64_01660 78f6d3406fa35752abfd51bbbb88aa0d 329 Gene3D G3DSA:3.40.50.720 102 297 3.1E-136 T 11-10-2018 AMS64_01660 78f6d3406fa35752abfd51bbbb88aa0d 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMS64_01660 78f6d3406fa35752abfd51bbbb88aa0d 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 1.4E-52 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMS64_01660 78f6d3406fa35752abfd51bbbb88aa0d 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMS64_01660 78f6d3406fa35752abfd51bbbb88aa0d 329 SUPERFAMILY SSF52283 2 135 1.23E-41 T 11-10-2018 AMS64_01660 78f6d3406fa35752abfd51bbbb88aa0d 329 SUPERFAMILY SSF51735 102 298 1.03E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_01660 78f6d3406fa35752abfd51bbbb88aa0d 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 3 328 5.7E-32 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMS64_01660 78f6d3406fa35752abfd51bbbb88aa0d 329 Gene3D G3DSA:3.40.50.720 2 317 3.1E-136 T 11-10-2018 AMS64_11630 db614138554784b8e75b5a3354042f7e 112 Gene3D G3DSA:3.10.20.30 1 112 3.1E-35 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_11630 db614138554784b8e75b5a3354042f7e 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.9E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMS64_11630 db614138554784b8e75b5a3354042f7e 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.9E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMS64_11630 db614138554784b8e75b5a3354042f7e 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.9E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMS64_11630 db614138554784b8e75b5a3354042f7e 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.8E-56 T 11-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AMS64_11630 db614138554784b8e75b5a3354042f7e 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMS64_11630 db614138554784b8e75b5a3354042f7e 112 SUPERFAMILY SSF54292 5 104 9.99E-33 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMS64_11630 db614138554784b8e75b5a3354042f7e 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 91 2.5E-14 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMS64_00590 658289b3caf86ebf8000bbee385ed553 224 Gene3D G3DSA:3.40.50.2300 1 130 9.8E-30 T 11-10-2018 AMS64_00590 658289b3caf86ebf8000bbee385ed553 224 SMART SM00862 145 221 7.9E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_00590 658289b3caf86ebf8000bbee385ed553 224 SMART SM00448 4 114 3.8E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_00590 658289b3caf86ebf8000bbee385ed553 224 SUPERFAMILY SSF46894 132 222 4.37E-24 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_00590 658289b3caf86ebf8000bbee385ed553 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 221 1.7E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_00590 658289b3caf86ebf8000bbee385ed553 224 Gene3D G3DSA:1.10.10.10 131 224 4.4E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_00590 658289b3caf86ebf8000bbee385ed553 224 Pfam PF00072 Response regulator receiver domain 6 114 3.9E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_00590 658289b3caf86ebf8000bbee385ed553 224 SUPERFAMILY SSF52172 2 131 4.41E-35 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_19730 2440e85b6bc9beacb98be50a137eb31a 456 SMART SM00670 7 139 1.0E-8 T 11-10-2018 IPR002716 PIN domain AMS64_19730 2440e85b6bc9beacb98be50a137eb31a 456 SUPERFAMILY SSF52540 245 434 7.82E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19730 2440e85b6bc9beacb98be50a137eb31a 456 Pfam PF02562 PhoH-like protein 246 450 7.9E-52 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 AMS64_19730 2440e85b6bc9beacb98be50a137eb31a 456 Gene3D G3DSA:3.40.50.1010 3 154 1.6E-28 T 11-10-2018 AMS64_19730 2440e85b6bc9beacb98be50a137eb31a 456 Pfam PF13638 PIN domain 9 148 7.7E-37 T 11-10-2018 IPR002716 PIN domain AMS64_19730 2440e85b6bc9beacb98be50a137eb31a 456 Gene3D G3DSA:3.40.50.300 244 454 3.9E-64 T 11-10-2018 AMS64_19730 2440e85b6bc9beacb98be50a137eb31a 456 SUPERFAMILY SSF88723 7 159 7.65E-15 T 11-10-2018 IPR029060 PIN-like domain superfamily AMS64_11675 514b4825d413c1c21e3eef382b0767fb 177 Pfam PF02036 SCP-2 sterol transfer family 36 134 3.7E-20 T 11-10-2018 IPR003033 SCP2 sterol-binding domain AMS64_11675 514b4825d413c1c21e3eef382b0767fb 177 Gene3D G3DSA:3.30.1050.10 1 137 7.0E-9 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMS64_11675 514b4825d413c1c21e3eef382b0767fb 177 PIRSF PIRSF025550 1 173 7.7E-73 T 11-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AMS64_11675 514b4825d413c1c21e3eef382b0767fb 177 SUPERFAMILY SSF55718 31 139 1.62E-22 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMS64_09075 4fb8605ce20786578eee71145e71142b 216 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 124 210 20.05 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AMS64_09075 4fb8605ce20786578eee71145e71142b 216 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 44 117 2.4E-30 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AMS64_09075 4fb8605ce20786578eee71145e71142b 216 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 127 210 1.5E-31 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AMS64_09075 4fb8605ce20786578eee71145e71142b 216 SUPERFAMILY SSF101386 126 215 1.35E-25 T 11-10-2018 AMS64_09075 4fb8605ce20786578eee71145e71142b 216 Gene3D G3DSA:1.10.287.1080 125 216 1.4E-29 T 11-10-2018 AMS64_09075 4fb8605ce20786578eee71145e71142b 216 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 67 116 4.0E-19 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AMS64_09075 4fb8605ce20786578eee71145e71142b 216 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 19 215 37.249 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AMS64_09075 4fb8605ce20786578eee71145e71142b 216 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 128 213 1.7E-16 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AMS64_09075 4fb8605ce20786578eee71145e71142b 216 Gene3D G3DSA:3.10.20.400 15 108 6.9E-34 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AMS64_09075 4fb8605ce20786578eee71145e71142b 216 SUPERFAMILY SSF141734 20 124 4.32E-43 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AMS64_07735 c63204c9fa52186c302ec01e6dd48cf5 114 PIRSF PIRSF017117 1 110 2.0E-48 T 11-10-2018 IPR016684 Type III secretion system chaperone, YscY AMS64_07735 c63204c9fa52186c302ec01e6dd48cf5 114 SUPERFAMILY SSF48452 7 109 2.41E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_07735 c63204c9fa52186c302ec01e6dd48cf5 114 Gene3D G3DSA:1.25.40.10 2 113 4.1E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_07735 c63204c9fa52186c302ec01e6dd48cf5 114 Pfam PF13174 Tetratricopeptide repeat 9 41 2.6E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_13820 c63204c9fa52186c302ec01e6dd48cf5 114 PIRSF PIRSF017117 1 110 2.0E-48 T 11-10-2018 IPR016684 Type III secretion system chaperone, YscY AMS64_13820 c63204c9fa52186c302ec01e6dd48cf5 114 SUPERFAMILY SSF48452 7 109 2.41E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_13820 c63204c9fa52186c302ec01e6dd48cf5 114 Gene3D G3DSA:1.25.40.10 2 113 4.1E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_13820 c63204c9fa52186c302ec01e6dd48cf5 114 Pfam PF13174 Tetratricopeptide repeat 9 41 2.6E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_16455 e7ae2936681f5b3998ea1b3bb0bb3614 423 SUPERFAMILY SSF51905 4 340 1.05E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_16455 e7ae2936681f5b3998ea1b3bb0bb3614 423 SUPERFAMILY SSF51905 133 303 1.81E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_16455 e7ae2936681f5b3998ea1b3bb0bb3614 423 Gene3D G3DSA:3.50.50.100 1 416 5.3E-143 T 11-10-2018 AMS64_16455 e7ae2936681f5b3998ea1b3bb0bb3614 423 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 307 1.2E-15 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_20530 353f87fdf0be3fb7806ffbc0a50644b0 310 SUPERFAMILY SSF46785 8 88 1.41E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_20530 353f87fdf0be3fb7806ffbc0a50644b0 310 SUPERFAMILY SSF53850 92 303 3.01E-34 T 11-10-2018 AMS64_20530 353f87fdf0be3fb7806ffbc0a50644b0 310 Pfam PF03466 LysR substrate binding domain 95 301 1.6E-18 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_20530 353f87fdf0be3fb7806ffbc0a50644b0 310 Gene3D G3DSA:3.40.190.10 177 275 9.6E-41 T 11-10-2018 AMS64_20530 353f87fdf0be3fb7806ffbc0a50644b0 310 Gene3D G3DSA:3.40.190.10 92 284 9.6E-41 T 11-10-2018 AMS64_20530 353f87fdf0be3fb7806ffbc0a50644b0 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.7E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_20530 353f87fdf0be3fb7806ffbc0a50644b0 310 Gene3D G3DSA:1.10.10.10 3 90 6.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_01935 a44f23ee9e12f60a618e003e70fcda01 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMS64_01935 a44f23ee9e12f60a618e003e70fcda01 157 SUPERFAMILY SSF54534 80 155 3.4E-20 T 11-10-2018 AMS64_01935 a44f23ee9e12f60a618e003e70fcda01 157 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 53.046 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AMS64_01935 a44f23ee9e12f60a618e003e70fcda01 157 Gene3D G3DSA:1.10.287.180 1 76 2.3E-31 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMS64_01935 a44f23ee9e12f60a618e003e70fcda01 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 27.742 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AMS64_01935 a44f23ee9e12f60a618e003e70fcda01 157 Gene3D G3DSA:3.10.50.30 77 157 1.1E-32 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AMS64_01935 a44f23ee9e12f60a618e003e70fcda01 157 Pfam PF03449 Transcription elongation factor, N-terminal 5 72 1.0E-25 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMS64_01935 a44f23ee9e12f60a618e003e70fcda01 157 PIRSF PIRSF006092 1 157 2.1E-44 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMS64_01935 a44f23ee9e12f60a618e003e70fcda01 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 8.3E-22 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMS64_01935 a44f23ee9e12f60a618e003e70fcda01 157 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 6.5E-80 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AMS64_01935 a44f23ee9e12f60a618e003e70fcda01 157 SUPERFAMILY SSF46557 3 77 1.14E-26 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMS64_01935 a44f23ee9e12f60a618e003e70fcda01 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 357 537 1.7E-72 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 Pfam PF14849 YidC periplasmic domain 68 347 8.8E-92 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 Pfam PF02096 60Kd inner membrane protein 358 537 7.5E-63 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.7E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 PRINTS PR00701 60kDa inner membrane protein signature 221 239 1.7E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 PRINTS PR00701 60kDa inner membrane protein signature 164 184 1.7E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 PRINTS PR00701 60kDa inner membrane protein signature 503 526 1.7E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 PRINTS PR00701 60kDa inner membrane protein signature 419 442 1.7E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 PRINTS PR00701 60kDa inner membrane protein signature 73 94 1.7E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 PRINTS PR00701 60kDa inner membrane protein signature 254 269 1.7E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 PRINTS PR00701 60kDa inner membrane protein signature 466 488 1.7E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 PRINTS PR00701 60kDa inner membrane protein signature 328 348 1.7E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 355 6.6E-122 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 539 25.497 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 Gene3D G3DSA:2.70.98.90 63 337 3.3E-102 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 PRINTS PR01900 YidC translocation/secretion protein signature 492 516 2.4E-25 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 PRINTS PR01900 YidC translocation/secretion protein signature 472 487 2.4E-25 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_00460 2dde6d3757f734c2df6d2d3290571f5e 548 PRINTS PR01900 YidC translocation/secretion protein signature 343 359 2.4E-25 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMS64_16505 f5c3b112616cb1b1faccd4290b41ef04 191 SUPERFAMILY SSF51064 135 189 5.75E-20 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AMS64_16505 f5c3b112616cb1b1faccd4290b41ef04 191 ProSitePatterns PS01071 grpE protein signature. 143 186 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMS64_16505 f5c3b112616cb1b1faccd4290b41ef04 191 SUPERFAMILY SSF58014 34 132 9.29E-29 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AMS64_16505 f5c3b112616cb1b1faccd4290b41ef04 191 PRINTS PR00773 GrpE protein signature 140 155 3.3E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMS64_16505 f5c3b112616cb1b1faccd4290b41ef04 191 PRINTS PR00773 GrpE protein signature 167 186 3.3E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMS64_16505 f5c3b112616cb1b1faccd4290b41ef04 191 PRINTS PR00773 GrpE protein signature 57 73 3.3E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMS64_16505 f5c3b112616cb1b1faccd4290b41ef04 191 PRINTS PR00773 GrpE protein signature 85 100 3.3E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMS64_16505 f5c3b112616cb1b1faccd4290b41ef04 191 Gene3D G3DSA:2.30.22.10 132 188 1.5E-26 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AMS64_16505 f5c3b112616cb1b1faccd4290b41ef04 191 Gene3D G3DSA:3.90.20.20 25 131 1.8E-32 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AMS64_16505 f5c3b112616cb1b1faccd4290b41ef04 191 Hamap MF_01151 Protein GrpE [grpE]. 2 188 21.481 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMS64_16505 f5c3b112616cb1b1faccd4290b41ef04 191 Pfam PF01025 GrpE 25 188 1.7E-54 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMS64_16890 80b9c6ea8c1f674567166f337009e2c6 502 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 298 496 8.4E-50 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AMS64_16890 80b9c6ea8c1f674567166f337009e2c6 502 SUPERFAMILY SSF51366 297 500 3.77E-56 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMS64_16890 80b9c6ea8c1f674567166f337009e2c6 502 Gene3D G3DSA:3.20.20.70 49 296 2.8E-174 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_16890 80b9c6ea8c1f674567166f337009e2c6 502 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 296 502 32.61 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AMS64_16890 80b9c6ea8c1f674567166f337009e2c6 502 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 91 109 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AMS64_16890 80b9c6ea8c1f674567166f337009e2c6 502 SUPERFAMILY SSF51366 44 293 8.48E-83 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMS64_16890 80b9c6ea8c1f674567166f337009e2c6 502 Gene3D G3DSA:3.20.20.70 297 496 2.8E-174 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_16890 80b9c6ea8c1f674567166f337009e2c6 502 Pfam PF00218 Indole-3-glycerol phosphate synthase 46 293 1.7E-95 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AMS64_16890 80b9c6ea8c1f674567166f337009e2c6 502 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 44 295 34.688 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AMS64_20905 6bddaae903414afd37a0ece45abb011b 493 SUPERFAMILY SSF53850 21 405 1.86E-63 T 11-10-2018 AMS64_20905 6bddaae903414afd37a0ece45abb011b 493 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 128 145 - T 11-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 AMS64_20905 6bddaae903414afd37a0ece45abb011b 493 Pfam PF01547 Bacterial extracellular solute-binding protein 31 318 4.8E-34 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMS64_20905 6bddaae903414afd37a0ece45abb011b 493 Gene3D G3DSA:3.40.190.10 39 339 2.1E-57 T 11-10-2018 AMS64_20905 6bddaae903414afd37a0ece45abb011b 493 Gene3D G3DSA:3.40.190.10 129 395 2.1E-57 T 11-10-2018 AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 554 841 2.1E-35 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 PRINTS PR00419 Adrenodoxin reductase family signature 554 576 5.6E-16 T 11-10-2018 AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 PRINTS PR00419 Adrenodoxin reductase family signature 577 590 5.6E-16 T 11-10-2018 AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 PRINTS PR00419 Adrenodoxin reductase family signature 683 697 5.6E-16 T 11-10-2018 AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 SUPERFAMILY SSF46548 887 968 6.28E-9 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 Gene3D G3DSA:3.50.50.60 551 656 3.6E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 TIGRFAM TIGR03315 Se_ygfK: putative selenate reductase, YgfK subunit 2 1031 0.0 T 11-10-2018 IPR017701 Putative selenate reductase YgfK AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 456 533 1.8E-15 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 941 952 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 SUPERFAMILY SSF46548 446 563 9.42E-19 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 Gene3D G3DSA:3.50.50.60 657 788 2.3E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 Gene3D G3DSA:1.10.1060.10 426 546 4.0E-21 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 SUPERFAMILY SSF51395 44 399 2.15E-15 T 11-10-2018 AMS64_08985 eb05b0453b3f6a2023db784ccd1c313d 1036 SUPERFAMILY SSF51971 553 788 9.42E-44 T 11-10-2018 AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 Pfam PF00005 ABC transporter 19 185 1.1E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 SUPERFAMILY SSF52540 11 238 5.88E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 Pfam PF16326 ABC transporter C-terminal domain 563 631 7.8E-19 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 Gene3D G3DSA:3.40.50.300 12 279 5.5E-67 T 11-10-2018 AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 Pfam PF00005 ABC transporter 336 469 5.5E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 Pfam PF12848 ABC transporter 224 299 3.0E-10 T 11-10-2018 IPR032781 ABC-transporter extension domain AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 Gene3D G3DSA:3.40.50.300 282 547 9.6E-65 T 11-10-2018 AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 SUPERFAMILY SSF52540 311 517 1.16E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 SMART SM00382 28 230 1.8E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 SMART SM00382 344 515 1.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_09565 b9287f0d0b5d5d2171ac808776f5dbd6 637 Gene3D G3DSA:1.10.287.380 555 636 1.4E-25 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AMS64_00485 1c05ce9efc1f00fc20fda4ba24bf6447 548 Gene3D G3DSA:1.20.1560.10 1 310 1.2E-23 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_00485 1c05ce9efc1f00fc20fda4ba24bf6447 548 Gene3D G3DSA:3.40.50.300 318 541 3.9E-39 T 11-10-2018 AMS64_00485 1c05ce9efc1f00fc20fda4ba24bf6447 548 ProSitePatterns PS00211 ABC transporters family signature. 446 460 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_00485 1c05ce9efc1f00fc20fda4ba24bf6447 548 SMART SM00382 349 522 3.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_00485 1c05ce9efc1f00fc20fda4ba24bf6447 548 SUPERFAMILY SSF52540 319 527 2.38E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00485 1c05ce9efc1f00fc20fda4ba24bf6447 548 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 523 1.2E-110 T 11-10-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015833|GO:0016021|GO:1904680 AMS64_00485 1c05ce9efc1f00fc20fda4ba24bf6447 548 Pfam PF00005 ABC transporter 343 473 1.1E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_00485 1c05ce9efc1f00fc20fda4ba24bf6447 548 SUPERFAMILY SSF90123 5 299 1.7E-28 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_20015 a5e8be9434b9fc3628c5ef188b402ced 148 SUPERFAMILY SSF55653 61 147 3.53E-23 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AMS64_20015 a5e8be9434b9fc3628c5ef188b402ced 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 8.4E-25 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal AMS64_20015 a5e8be9434b9fc3628c5ef188b402ced 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.2E-21 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20015 a5e8be9434b9fc3628c5ef188b402ced 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 7.6E-53 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_20015 a5e8be9434b9fc3628c5ef188b402ced 148 SUPERFAMILY SSF55658 1 57 5.41E-18 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AMS64_20015 a5e8be9434b9fc3628c5ef188b402ced 148 Gene3D G3DSA:3.10.430.100 62 147 4.4E-27 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AMS64_20015 a5e8be9434b9fc3628c5ef188b402ced 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20015 a5e8be9434b9fc3628c5ef188b402ced 148 Gene3D G3DSA:3.40.5.10 1 50 3.9E-23 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20015 a5e8be9434b9fc3628c5ef188b402ced 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.74 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_06205 d3a2dbce047408fd843cd15b6da3139a 155 Gene3D G3DSA:3.40.1280.10 1 155 9.4E-52 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMS64_06205 d3a2dbce047408fd843cd15b6da3139a 155 Pfam PF02590 Predicted SPOUT methyltransferase 1 153 6.9E-47 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AMS64_06205 d3a2dbce047408fd843cd15b6da3139a 155 SUPERFAMILY SSF75217 1 153 5.18E-50 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMS64_06205 d3a2dbce047408fd843cd15b6da3139a 155 PIRSF PIRSF004505 1 154 8.5E-41 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AMS64_06205 d3a2dbce047408fd843cd15b6da3139a 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.521 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AMS64_06205 d3a2dbce047408fd843cd15b6da3139a 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 8.9E-81 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AMS64_04950 4a7870ce7dd1835afa56f425a2b48d45 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 119 439 1.3E-23 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AMS64_04950 4a7870ce7dd1835afa56f425a2b48d45 440 Gene3D G3DSA:3.40.50.150 88 434 6.9E-114 T 11-10-2018 AMS64_04950 4a7870ce7dd1835afa56f425a2b48d45 440 SUPERFAMILY SSF50249 4 66 1.09E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_04950 4a7870ce7dd1835afa56f425a2b48d45 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 371 401 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AMS64_04950 4a7870ce7dd1835afa56f425a2b48d45 440 Gene3D G3DSA:2.40.50.140 1 87 2.6E-30 T 11-10-2018 AMS64_04950 4a7870ce7dd1835afa56f425a2b48d45 440 SUPERFAMILY SSF53335 76 439 2.86E-85 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_04950 4a7870ce7dd1835afa56f425a2b48d45 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 432 4.4E-118 T 11-10-2018 AMS64_04950 4a7870ce7dd1835afa56f425a2b48d45 440 Gene3D G3DSA:3.40.1350.30 135 272 6.9E-114 T 11-10-2018 AMS64_04950 4a7870ce7dd1835afa56f425a2b48d45 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 422 432 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site AMS64_04950 4a7870ce7dd1835afa56f425a2b48d45 440 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 440 66.951 T 11-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AMS64_04950 4a7870ce7dd1835afa56f425a2b48d45 440 Pfam PF01938 TRAM domain 15 64 9.4E-9 T 11-10-2018 IPR002792 TRAM domain AMS64_16995 4c5e15905e066e95618aef6950fb4ed0 576 Gene3D G3DSA:1.20.1560.10 4 322 1.2E-26 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_16995 4c5e15905e066e95618aef6950fb4ed0 576 SUPERFAMILY SSF52540 333 571 3.48E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_16995 4c5e15905e066e95618aef6950fb4ed0 576 Pfam PF00005 ABC transporter 357 503 3.3E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_16995 4c5e15905e066e95618aef6950fb4ed0 576 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_16995 4c5e15905e066e95618aef6950fb4ed0 576 Gene3D G3DSA:3.40.50.300 327 574 2.9E-71 T 11-10-2018 AMS64_16995 4c5e15905e066e95618aef6950fb4ed0 576 SUPERFAMILY SSF90123 7 320 1.57E-36 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_16995 4c5e15905e066e95618aef6950fb4ed0 576 SMART SM00382 365 552 6.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_16995 4c5e15905e066e95618aef6950fb4ed0 576 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 534 6.4E-141 T 11-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 AMS64_06675 053ecae654f8cce578a22f10e68b8f7f 546 SUPERFAMILY SSF51445 14 460 1.33E-132 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_06675 053ecae654f8cce578a22f10e68b8f7f 546 SMART SM00642 20 403 9.0E-125 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_06675 053ecae654f8cce578a22f10e68b8f7f 546 Gene3D G3DSA:3.90.400.10 112 179 1.1E-161 T 11-10-2018 AMS64_06675 053ecae654f8cce578a22f10e68b8f7f 546 Gene3D G3DSA:3.20.20.80 15 456 1.1E-161 T 11-10-2018 AMS64_06675 053ecae654f8cce578a22f10e68b8f7f 546 Pfam PF11941 Domain of unknown function (DUF3459) 447 528 1.4E-9 T 11-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AMS64_06675 053ecae654f8cce578a22f10e68b8f7f 546 Pfam PF00128 Alpha amylase, catalytic domain 35 364 1.6E-98 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_03630 c77e1baae316f0274efc112595c12607 352 Pfam PF00710 Asparaginase, N-terminal 27 220 1.7E-64 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AMS64_03630 c77e1baae316f0274efc112595c12607 352 SUPERFAMILY SSF53774 25 351 5.89E-108 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 AMS64_03630 c77e1baae316f0274efc112595c12607 352 SMART SM00870 27 346 2.5E-147 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMS64_03630 c77e1baae316f0274efc112595c12607 352 PRINTS PR00139 Asparaginase/glutaminase family signature 286 304 2.7E-22 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMS64_03630 c77e1baae316f0274efc112595c12607 352 PRINTS PR00139 Asparaginase/glutaminase family signature 107 125 2.7E-22 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMS64_03630 c77e1baae316f0274efc112595c12607 352 PRINTS PR00139 Asparaginase/glutaminase family signature 28 39 2.7E-22 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMS64_03630 c77e1baae316f0274efc112595c12607 352 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 108 118 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AMS64_03630 c77e1baae316f0274efc112595c12607 352 Gene3D G3DSA:3.40.50.40 239 352 4.1E-40 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 AMS64_03630 c77e1baae316f0274efc112595c12607 352 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 30 38 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AMS64_03630 c77e1baae316f0274efc112595c12607 352 Gene3D G3DSA:3.40.50.1170 23 238 3.9E-88 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 AMS64_03630 c77e1baae316f0274efc112595c12607 352 PIRSF PIRSF001220 22 352 2.0E-94 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMS64_03630 c77e1baae316f0274efc112595c12607 352 PIRSF PIRSF500176 24 352 3.8E-82 T 11-10-2018 AMS64_03630 c77e1baae316f0274efc112595c12607 352 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 10 352 3.6E-160 T 11-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 AMS64_15220 ca3e53ba2cedf45206e3d7da348b5ad2 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 150 185 1.0E-4 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AMS64_15220 ca3e53ba2cedf45206e3d7da348b5ad2 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 134 1.2E-8 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AMS64_15220 ca3e53ba2cedf45206e3d7da348b5ad2 291 Gene3D G3DSA:3.30.479.10 11 153 6.3E-24 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 AMS64_15220 ca3e53ba2cedf45206e3d7da348b5ad2 291 SUPERFAMILY SSF55620 1 154 8.89E-31 T 11-10-2018 AMS64_15220 ca3e53ba2cedf45206e3d7da348b5ad2 291 SUPERFAMILY SSF55620 151 290 5.11E-26 T 11-10-2018 AMS64_19780 46440d685711b266e0995d408890420a 544 SUPERFAMILY SSF52029 184 376 6.98E-83 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AMS64_19780 46440d685711b266e0995d408890420a 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.8E-93 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AMS64_19780 46440d685711b266e0995d408890420a 544 Gene3D G3DSA:3.30.260.10 136 410 4.8E-238 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMS64_19780 46440d685711b266e0995d408890420a 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.4E-254 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMS64_19780 46440d685711b266e0995d408890420a 544 SUPERFAMILY SSF48592 7 521 2.08E-74 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AMS64_19780 46440d685711b266e0995d408890420a 544 SUPERFAMILY SSF54849 137 204 5.26E-24 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMS64_19780 46440d685711b266e0995d408890420a 544 Gene3D G3DSA:3.50.7.10 192 372 4.8E-238 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AMS64_19780 46440d685711b266e0995d408890420a 544 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMS64_19780 46440d685711b266e0995d408890420a 544 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMS64_19780 46440d685711b266e0995d408890420a 544 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMS64_19780 46440d685711b266e0995d408890420a 544 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMS64_19780 46440d685711b266e0995d408890420a 544 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMS64_19780 46440d685711b266e0995d408890420a 544 Gene3D G3DSA:1.10.560.10 8 521 4.8E-238 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AMS64_19780 46440d685711b266e0995d408890420a 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMS64_19780 46440d685711b266e0995d408890420a 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 541 41.227 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMS64_18835 7c42e4768ec4070fa35678eae56851ba 158 Gene3D G3DSA:3.10.50.30 76 158 1.3E-31 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AMS64_18835 7c42e4768ec4070fa35678eae56851ba 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.5E-31 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMS64_18835 7c42e4768ec4070fa35678eae56851ba 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.806 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AMS64_18835 7c42e4768ec4070fa35678eae56851ba 158 SUPERFAMILY SSF46557 3 78 2.49E-29 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMS64_18835 7c42e4768ec4070fa35678eae56851ba 158 SUPERFAMILY SSF54534 81 157 2.09E-24 T 11-10-2018 AMS64_18835 7c42e4768ec4070fa35678eae56851ba 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 4.1E-59 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AMS64_18835 7c42e4768ec4070fa35678eae56851ba 158 PIRSF PIRSF006092 1 158 1.0E-54 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMS64_18835 7c42e4768ec4070fa35678eae56851ba 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMS64_18835 7c42e4768ec4070fa35678eae56851ba 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 3.0E-28 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMS64_18835 7c42e4768ec4070fa35678eae56851ba 158 Gene3D G3DSA:1.10.287.180 1 75 1.6E-32 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMS64_18835 7c42e4768ec4070fa35678eae56851ba 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMS64_11565 22a2814e768f45dde68defb4642da611 494 SMART SM00062 48 271 1.1E-26 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_11565 22a2814e768f45dde68defb4642da611 494 Gene3D G3DSA:1.10.530.10 288 472 1.5E-34 T 11-10-2018 AMS64_11565 22a2814e768f45dde68defb4642da611 494 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 15 476 47.162 T 11-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 AMS64_11565 22a2814e768f45dde68defb4642da611 494 SUPERFAMILY SSF53850 44 270 1.15E-39 T 11-10-2018 AMS64_11565 22a2814e768f45dde68defb4642da611 494 Gene3D G3DSA:3.40.190.10 42 266 7.8E-65 T 11-10-2018 AMS64_11565 22a2814e768f45dde68defb4642da611 494 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 270 1.4E-39 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_11565 22a2814e768f45dde68defb4642da611 494 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 312 340 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AMS64_11565 22a2814e768f45dde68defb4642da611 494 Pfam PF01464 Transglycosylase SLT domain 299 406 5.6E-23 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AMS64_11565 22a2814e768f45dde68defb4642da611 494 SUPERFAMILY SSF53955 248 452 2.41E-36 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_11565 22a2814e768f45dde68defb4642da611 494 Gene3D G3DSA:3.40.190.10 133 227 7.8E-65 T 11-10-2018 AMS64_09715 1bdec858deef9899092fac8b7cb31e46 295 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 255 3.7E-48 T 11-10-2018 AMS64_09715 1bdec858deef9899092fac8b7cb31e46 295 SUPERFAMILY SSF51621 10 291 1.03E-96 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMS64_09715 1bdec858deef9899092fac8b7cb31e46 295 ProSitePatterns PS00161 Isocitrate lyase signature. 122 127 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AMS64_09715 1bdec858deef9899092fac8b7cb31e46 295 Gene3D G3DSA:3.20.20.60 4 295 1.5E-99 T 11-10-2018 AMS64_09715 1bdec858deef9899092fac8b7cb31e46 295 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 6 293 48.61 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AMS64_09715 1bdec858deef9899092fac8b7cb31e46 295 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 9 292 1.1E-125 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AMS64_07325 c2f1bd5acda7802afcafaa7ff927ce71 356 PRINTS PR00955 Flagellar motor switch protein FliM signature 87 103 2.7E-19 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMS64_07325 c2f1bd5acda7802afcafaa7ff927ce71 356 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 2.7E-19 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMS64_07325 c2f1bd5acda7802afcafaa7ff927ce71 356 PRINTS PR00955 Flagellar motor switch protein FliM signature 112 131 2.7E-19 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMS64_07325 c2f1bd5acda7802afcafaa7ff927ce71 356 PRINTS PR00955 Flagellar motor switch protein FliM signature 210 228 2.7E-19 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMS64_07325 c2f1bd5acda7802afcafaa7ff927ce71 356 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 318 2.9E-114 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMS64_07325 c2f1bd5acda7802afcafaa7ff927ce71 356 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 249 318 8.9E-20 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AMS64_07325 c2f1bd5acda7802afcafaa7ff927ce71 356 SUPERFAMILY SSF101801 246 323 1.44E-16 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_07325 c2f1bd5acda7802afcafaa7ff927ce71 356 Gene3D G3DSA:2.30.330.10 239 327 7.6E-6 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_07325 c2f1bd5acda7802afcafaa7ff927ce71 356 Pfam PF02154 Flagellar motor switch protein FliM 36 228 4.0E-79 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMS64_07325 c2f1bd5acda7802afcafaa7ff927ce71 356 Gene3D G3DSA:3.40.1550.10 42 229 1.1E-53 T 11-10-2018 IPR028976 CheC-like superfamily AMS64_07325 c2f1bd5acda7802afcafaa7ff927ce71 356 SUPERFAMILY SSF103039 4 229 4.71E-19 T 11-10-2018 IPR028976 CheC-like superfamily AMS64_07325 c2f1bd5acda7802afcafaa7ff927ce71 356 PIRSF PIRSF002888 1 328 1.4E-95 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMS64_04015 a9acac615540a5b493fc04c7815ec94f 764 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 651 695 1.4E-5 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMS64_04015 a9acac615540a5b493fc04c7815ec94f 764 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 639 2.7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMS64_04015 a9acac615540a5b493fc04c7815ec94f 764 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 33.141 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_04015 a9acac615540a5b493fc04c7815ec94f 764 Gene3D G3DSA:3.90.199.10 36 485 3.2E-174 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AMS64_04015 a9acac615540a5b493fc04c7815ec94f 764 Gene3D G3DSA:2.120.10.90 504 746 3.1E-14 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMS64_04015 a9acac615540a5b493fc04c7815ec94f 764 Gene3D G3DSA:1.10.268.10 373 458 3.2E-174 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMS64_04015 a9acac615540a5b493fc04c7815ec94f 764 Gene3D G3DSA:3.30.1360.40 242 335 3.2E-174 T 11-10-2018 AMS64_04015 a9acac615540a5b493fc04c7815ec94f 764 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 747 0.0 T 11-10-2018 AMS64_04015 a9acac615540a5b493fc04c7815ec94f 764 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 4.0E-131 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_04015 a9acac615540a5b493fc04c7815ec94f 764 SUPERFAMILY SSF101904 501 745 2.62E-53 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMS64_04015 a9acac615540a5b493fc04c7815ec94f 764 SMART SM00434 15 465 8.3E-223 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_04015 a9acac615540a5b493fc04c7815ec94f 764 SUPERFAMILY SSF56719 35 487 2.49E-151 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMS64_02215 44b9c500524fc6eee5bdb6f716d41a75 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 280 3.2E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_02215 44b9c500524fc6eee5bdb6f716d41a75 299 SUPERFAMILY SSF161098 21 291 2.15E-45 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_02215 44b9c500524fc6eee5bdb6f716d41a75 299 Gene3D G3DSA:1.10.3720.10 15 288 3.4E-38 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_10920 59dd6900427e3005d970f1979bf945df 928 SUPERFAMILY SSF63411 472 690 4.33E-51 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMS64_10920 59dd6900427e3005d970f1979bf945df 928 SUPERFAMILY SSF63411 708 903 1.03E-41 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMS64_10920 59dd6900427e3005d970f1979bf945df 928 Gene3D G3DSA:3.30.830.10 242 470 3.7E-74 T 11-10-2018 AMS64_10920 59dd6900427e3005d970f1979bf945df 928 Pfam PF00675 Insulinase (Peptidase family M16) 23 160 1.1E-34 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AMS64_10920 59dd6900427e3005d970f1979bf945df 928 Pfam PF05193 Peptidase M16 inactive domain 651 828 3.2E-9 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AMS64_10920 59dd6900427e3005d970f1979bf945df 928 Pfam PF05193 Peptidase M16 inactive domain 184 361 3.8E-16 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AMS64_10920 59dd6900427e3005d970f1979bf945df 928 Gene3D G3DSA:3.30.830.10 472 858 1.7E-106 T 11-10-2018 AMS64_10920 59dd6900427e3005d970f1979bf945df 928 Gene3D G3DSA:3.30.830.10 2 239 2.6E-81 T 11-10-2018 AMS64_10920 59dd6900427e3005d970f1979bf945df 928 Pfam PF16187 Middle or third domain of peptidase_M16 368 645 1.1E-80 T 11-10-2018 IPR032632 Peptidase M16, middle/third domain AMS64_10920 59dd6900427e3005d970f1979bf945df 928 SUPERFAMILY SSF63411 2 231 5.32E-59 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMS64_10920 59dd6900427e3005d970f1979bf945df 928 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 44 67 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AMS64_10920 59dd6900427e3005d970f1979bf945df 928 SUPERFAMILY SSF63411 235 471 1.22E-76 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMS64_10920 59dd6900427e3005d970f1979bf945df 928 Gene3D G3DSA:3.30.830.10 620 885 1.7E-106 T 11-10-2018 AMS64_13185 47f8f35ff8e24e0baf16a97206334264 241 Pfam PF01575 MaoC like domain 97 207 7.4E-23 T 11-10-2018 IPR002539 MaoC-like dehydratase domain AMS64_13185 47f8f35ff8e24e0baf16a97206334264 241 SUPERFAMILY SSF54637 99 240 7.02E-31 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_13185 47f8f35ff8e24e0baf16a97206334264 241 Gene3D G3DSA:3.10.129.10 90 240 1.8E-38 T 11-10-2018 AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 Pfam PF00206 Lyase 15 347 1.1E-101 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 1.1E-27 T 11-10-2018 IPR000362 Fumarate lyase family AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00149 Fumarate lyase superfamily signature 140 158 1.1E-27 T 11-10-2018 IPR000362 Fumarate lyase family AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00149 Fumarate lyase superfamily signature 185 203 1.1E-27 T 11-10-2018 IPR000362 Fumarate lyase family AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 1.1E-27 T 11-10-2018 IPR000362 Fumarate lyase family AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 8 474 6.9E-242 T 11-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 Gene3D G3DSA:1.10.275.10 8 144 1.3E-56 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 Gene3D G3DSA:1.20.200.10 145 412 4.5E-112 T 11-10-2018 AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 Pfam PF10415 Fumarase C C-terminus 413 465 3.8E-17 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 Gene3D G3DSA:1.10.40.30 413 462 1.5E-27 T 11-10-2018 AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 SUPERFAMILY SSF48557 5 459 3.09E-140 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00145 Argininosuccinate lyase family signature 139 161 2.5E-5 T 11-10-2018 AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00145 Argininosuccinate lyase family signature 180 200 2.5E-5 T 11-10-2018 AMS64_19800 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00145 Argininosuccinate lyase family signature 322 338 2.5E-5 T 11-10-2018 AMS64_20525 5c1b7001fae2d761a3521b080ee368c6 398 Pfam PF00155 Aminotransferase class I and II 27 391 5.2E-83 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMS64_20525 5c1b7001fae2d761a3521b080ee368c6 398 SUPERFAMILY SSF53383 1 397 2.6E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_20525 5c1b7001fae2d761a3521b080ee368c6 398 PRINTS PR00799 Aspartate aminotransferase signature 273 298 8.6E-37 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMS64_20525 5c1b7001fae2d761a3521b080ee368c6 398 PRINTS PR00799 Aspartate aminotransferase signature 341 359 8.6E-37 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMS64_20525 5c1b7001fae2d761a3521b080ee368c6 398 PRINTS PR00799 Aspartate aminotransferase signature 175 194 8.6E-37 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMS64_20525 5c1b7001fae2d761a3521b080ee368c6 398 PRINTS PR00799 Aspartate aminotransferase signature 206 218 8.6E-37 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMS64_20525 5c1b7001fae2d761a3521b080ee368c6 398 Gene3D G3DSA:3.40.640.10 60 300 3.3E-157 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_20525 5c1b7001fae2d761a3521b080ee368c6 398 Gene3D G3DSA:3.90.1150.10 5 392 3.3E-157 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_05270 910c74e57935f4a6dd4e8bb76ccac706 348 Pfam PF03060 Nitronate monooxygenase 8 338 6.1E-76 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMS64_05270 910c74e57935f4a6dd4e8bb76ccac706 348 Gene3D G3DSA:3.20.20.70 2 346 8.3E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_05270 910c74e57935f4a6dd4e8bb76ccac706 348 SUPERFAMILY SSF51412 5 324 4.73E-64 T 11-10-2018 AMS64_13065 560b928d22f83e218e8b162a94721cb3 267 SMART SM00382 27 214 1.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_13065 560b928d22f83e218e8b162a94721cb3 267 Pfam PF00005 ABC transporter 18 167 7.8E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_13065 560b928d22f83e218e8b162a94721cb3 267 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_13065 560b928d22f83e218e8b162a94721cb3 267 SUPERFAMILY SSF52540 3 228 1.15E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_13065 560b928d22f83e218e8b162a94721cb3 267 Gene3D G3DSA:3.40.50.300 2 254 4.5E-70 T 11-10-2018 AMS64_17440 0f45a1d930a8ad8d483d367395094981 82 Gene3D G3DSA:1.10.1900.30 9 77 6.8E-32 T 11-10-2018 IPR038191 YciN superfamily AMS64_17440 0f45a1d930a8ad8d483d367395094981 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 81 7.1E-40 T 11-10-2018 IPR019633 Protein of unknown function DUF2498 AMS64_03955 51c7de3732267f68e33db9e166036d9f 595 Pfam PF02254 TrkA-N domain 400 501 5.1E-6 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMS64_03955 51c7de3732267f68e33db9e166036d9f 595 Pfam PF00999 Sodium/hydrogen exchanger family 9 386 1.5E-34 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMS64_03955 51c7de3732267f68e33db9e166036d9f 595 SUPERFAMILY SSF51735 398 501 7.06E-8 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_03955 51c7de3732267f68e33db9e166036d9f 595 Gene3D G3DSA:1.20.1530.20 2 394 2.2E-17 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMS64_03955 51c7de3732267f68e33db9e166036d9f 595 Gene3D G3DSA:3.40.50.720 395 509 1.1E-9 T 11-10-2018 AMS64_04880 ef1b163c0fcf6fd416422e52e57dbea7 257 Pfam PF01061 ABC-2 type transporter 10 219 3.5E-38 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMS64_04880 ef1b163c0fcf6fd416422e52e57dbea7 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 8.7E-10 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMS64_04880 ef1b163c0fcf6fd416422e52e57dbea7 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 8.7E-10 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMS64_04880 ef1b163c0fcf6fd416422e52e57dbea7 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 59 81 8.7E-10 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMS64_04880 ef1b163c0fcf6fd416422e52e57dbea7 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 8.7E-10 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMS64_04880 ef1b163c0fcf6fd416422e52e57dbea7 257 PIRSF PIRSF006648 14 254 1.4E-22 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 SUPERFAMILY SSF63867 511 590 4.06E-23 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 SUPERFAMILY SSF53218 363 506 1.96E-43 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 Gene3D G3DSA:2.20.25.120 53 89 5.5E-56 T 11-10-2018 AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 SUPERFAMILY SSF63882 194 359 4.97E-48 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 147 5.8E-49 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 Gene3D G3DSA:3.40.980.10 361 511 9.1E-138 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 Gene3D G3DSA:2.40.340.10 512 582 9.1E-138 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 Gene3D G3DSA:3.40.50.300 10 175 5.5E-56 T 11-10-2018 AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 Pfam PF00994 Probable molybdopterin binding domain 368 502 2.3E-25 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 SMART SM00852 366 503 4.1E-42 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 178 2.9E-42 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 Pfam PF03454 MoeA C-terminal region (domain IV) 518 586 4.3E-19 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 363 499 3.9E-32 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 SUPERFAMILY SSF52540 8 179 7.02E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 Gene3D G3DSA:3.90.105.10 216 360 9.1E-138 T 11-10-2018 AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 195 353 5.7E-40 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_07105 3c79dccb35e173f013f3269fe6a27193 592 Gene3D G3DSA:2.170.190.11 237 327 9.1E-138 T 11-10-2018 AMS64_21290 2b3da7fd7e14e808a24f621b5ecd91ac 239 PIRSF PIRSF017818 1 239 1.7E-105 T 11-10-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AMS64_21290 2b3da7fd7e14e808a24f621b5ecd91ac 239 Gene3D G3DSA:3.40.50.1000 28 239 1.3E-85 T 11-10-2018 IPR023214 HAD superfamily AMS64_21290 2b3da7fd7e14e808a24f621b5ecd91ac 239 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 37 222 3.7E-35 T 11-10-2018 IPR005519 Acid phosphatase, class B-like AMS64_21290 2b3da7fd7e14e808a24f621b5ecd91ac 239 SUPERFAMILY SSF56784 35 238 8.64E-70 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_21290 2b3da7fd7e14e808a24f621b5ecd91ac 239 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 239 1.2E-97 T 11-10-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AMS64_05825 6554461c936259d91b461349c82e5f6e 170 Pfam PF06228 Haem utilisation ChuX/HutX 23 160 8.4E-35 T 11-10-2018 IPR010413 Heme utilization carrier protein HutX-like AMS64_05825 6554461c936259d91b461349c82e5f6e 170 PIRSF PIRSF030840 1 166 7.4E-59 T 11-10-2018 IPR010413 Heme utilization carrier protein HutX-like AMS64_05825 6554461c936259d91b461349c82e5f6e 170 SUPERFAMILY SSF144064 4 162 3.14E-55 T 11-10-2018 AMS64_05825 6554461c936259d91b461349c82e5f6e 170 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 7 160 2.1E-63 T 11-10-2018 IPR010413 Heme utilization carrier protein HutX-like AMS64_05825 6554461c936259d91b461349c82e5f6e 170 Gene3D G3DSA:3.40.1570.10 1 168 2.4E-59 T 11-10-2018 AMS64_03875 a9c32ace390877c2f58d66687b0034f5 286 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 16 285 55.659 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AMS64_03875 a9c32ace390877c2f58d66687b0034f5 286 Gene3D G3DSA:1.10.12.10 224 274 2.9E-31 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMS64_03875 a9c32ace390877c2f58d66687b0034f5 286 SUPERFAMILY SSF52096 18 281 2.42E-79 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_03875 a9c32ace390877c2f58d66687b0034f5 286 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 280 1.1E-79 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMS64_03875 a9c32ace390877c2f58d66687b0034f5 286 TIGRFAM TIGR01929 menB: naphthoate synthase 23 282 2.0E-146 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AMS64_03875 a9c32ace390877c2f58d66687b0034f5 286 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 124 144 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMS64_03875 a9c32ace390877c2f58d66687b0034f5 286 Gene3D G3DSA:3.90.226.10 2 223 8.9E-86 T 11-10-2018 AMS64_19590 6bc6fc257e840f06d191ac8a06595dd5 465 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 75 99 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AMS64_19590 6bc6fc257e840f06d191ac8a06595dd5 465 SUPERFAMILY SSF103473 6 438 3.01E-41 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_19590 6bc6fc257e840f06d191ac8a06595dd5 465 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AMS64_19590 6bc6fc257e840f06d191ac8a06595dd5 465 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 8 213 2.3E-58 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AMS64_19590 6bc6fc257e840f06d191ac8a06595dd5 465 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 223 439 1.3E-47 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AMS64_19590 6bc6fc257e840f06d191ac8a06595dd5 465 Gene3D G3DSA:1.20.1250.20 212 443 4.6E-52 T 11-10-2018 AMS64_19590 6bc6fc257e840f06d191ac8a06595dd5 465 Pfam PF00854 POT family 87 199 1.1E-30 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AMS64_19590 6bc6fc257e840f06d191ac8a06595dd5 465 Pfam PF00854 POT family 233 410 3.7E-33 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AMS64_19590 6bc6fc257e840f06d191ac8a06595dd5 465 Gene3D G3DSA:1.20.1250.20 8 211 6.0E-67 T 11-10-2018 AMS64_21465 d1712094571cd36514769b38c903790e 510 Pfam PF00221 Aromatic amino acid lyase 11 461 1.6E-183 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AMS64_21465 d1712094571cd36514769b38c903790e 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 508 1.4E-210 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_21465 d1712094571cd36514769b38c903790e 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 43.512 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_21465 d1712094571cd36514769b38c903790e 510 Gene3D G3DSA:1.10.275.10 2 197 3.7E-68 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AMS64_21465 d1712094571cd36514769b38c903790e 510 Gene3D G3DSA:1.20.200.10 198 509 5.9E-120 T 11-10-2018 AMS64_21465 d1712094571cd36514769b38c903790e 510 SUPERFAMILY SSF48557 4 507 1.02E-188 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMS64_21465 d1712094571cd36514769b38c903790e 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 154 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AMS64_19255 fe1a4ae8d3a98aa91e5632c76406128d 290 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 52 284 2.1E-75 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AMS64_19255 fe1a4ae8d3a98aa91e5632c76406128d 290 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 12 287 44.797 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AMS64_19255 fe1a4ae8d3a98aa91e5632c76406128d 290 Pfam PF02666 Phosphatidylserine decarboxylase 65 284 3.1E-58 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AMS64_16485 49c050c8917e1e8156024df635cfb959 304 Gene3D G3DSA:3.40.1190.20 1 303 8.4E-88 T 11-10-2018 IPR029056 Ribokinase-like AMS64_16485 49c050c8917e1e8156024df635cfb959 304 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 21 45 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMS64_16485 49c050c8917e1e8156024df635cfb959 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 235 248 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMS64_16485 49c050c8917e1e8156024df635cfb959 304 Pfam PF00294 pfkB family carbohydrate kinase 16 289 1.2E-61 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AMS64_16485 49c050c8917e1e8156024df635cfb959 304 SUPERFAMILY SSF53613 1 297 3.9E-76 T 11-10-2018 IPR029056 Ribokinase-like AMS64_13270 f5a1694bcd143f00577617e9b2f20905 397 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 4.5E-31 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_13270 f5a1694bcd143f00577617e9b2f20905 397 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 56.371 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_13270 f5a1694bcd143f00577617e9b2f20905 397 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.8E-38 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_13270 f5a1694bcd143f00577617e9b2f20905 397 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 8.8E-113 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_13270 f5a1694bcd143f00577617e9b2f20905 397 Gene3D G3DSA:3.40.50.720 1 396 2.9E-182 T 11-10-2018 AMS64_11510 929b825688151b7672edf8f35ab0615d 260 Gene3D G3DSA:3.30.70.1070 177 257 2.0E-6 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMS64_11510 929b825688151b7672edf8f35ab0615d 260 Pfam PF05036 Sporulation related domain 181 256 2.6E-12 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AMS64_11510 929b825688151b7672edf8f35ab0615d 260 SUPERFAMILY SSF110997 181 258 2.22E-13 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMS64_20205 26c73c0ec19bd1163976174771b549a1 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.6E-30 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_20205 26c73c0ec19bd1163976174771b549a1 87 SUPERFAMILY SSF46992 3 86 3.53E-32 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_20205 26c73c0ec19bd1163976174771b549a1 87 Pfam PF01649 Ribosomal protein S20 2 84 3.9E-28 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_20205 26c73c0ec19bd1163976174771b549a1 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.874 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_20205 26c73c0ec19bd1163976174771b549a1 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 4.0E-21 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_20205 26c73c0ec19bd1163976174771b549a1 87 Gene3D G3DSA:1.20.58.110 1 87 2.2E-30 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_00775 4d436762b7038461417ada0bee597acb 421 Gene3D G3DSA:2.40.50.140 48 117 1.0E-34 T 11-10-2018 AMS64_00775 4d436762b7038461417ada0bee597acb 421 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 7.3E-23 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_00775 4d436762b7038461417ada0bee597acb 421 SUPERFAMILY SSF68912 1 46 1.49E-10 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AMS64_00775 4d436762b7038461417ada0bee597acb 421 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 3.5E-14 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AMS64_00775 4d436762b7038461417ada0bee597acb 421 SMART SM00959 5 47 2.6E-14 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AMS64_00775 4d436762b7038461417ada0bee597acb 421 Gene3D G3DSA:3.40.50.300 130 417 2.3E-133 T 11-10-2018 AMS64_00775 4d436762b7038461417ada0bee597acb 421 Gene3D G3DSA:1.10.720.10 1 47 3.4E-21 T 11-10-2018 AMS64_00775 4d436762b7038461417ada0bee597acb 421 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 250.435 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMS64_00775 4d436762b7038461417ada0bee597acb 421 SMART SM00382 170 356 1.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_00775 4d436762b7038461417ada0bee597acb 421 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 8.9E-32 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AMS64_00775 4d436762b7038461417ada0bee597acb 421 SMART SM00357 52 118 2.8E-19 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMS64_00775 4d436762b7038461417ada0bee597acb 421 SUPERFAMILY SSF50249 48 125 4.71E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_00775 4d436762b7038461417ada0bee597acb 421 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 5.9E-219 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMS64_00775 4d436762b7038461417ada0bee597acb 421 SUPERFAMILY SSF52540 90 371 8.15E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19640 26f311c75f02da3c3812bba407368860 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 8.3E-24 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AMS64_19640 26f311c75f02da3c3812bba407368860 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 8.3E-24 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AMS64_19640 26f311c75f02da3c3812bba407368860 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 8.3E-24 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AMS64_19640 26f311c75f02da3c3812bba407368860 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 8.3E-24 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AMS64_19640 26f311c75f02da3c3812bba407368860 98 Gene3D G3DSA:1.10.10.60 1 98 1.4E-30 T 11-10-2018 AMS64_19640 26f311c75f02da3c3812bba407368860 98 PIRSF PIRSF002097 1 98 3.6E-42 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AMS64_19640 26f311c75f02da3c3812bba407368860 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 28.99 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AMS64_19640 26f311c75f02da3c3812bba407368860 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_19640 26f311c75f02da3c3812bba407368860 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_19640 26f311c75f02da3c3812bba407368860 98 SUPERFAMILY SSF46689 6 98 2.72E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_19640 26f311c75f02da3c3812bba407368860 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.4E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 Pfam PF01434 Peptidase family M41 385 594 1.6E-82 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 Gene3D G3DSA:2.40.50.920 26 102 9.0E-23 T 11-10-2018 AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 SMART SM00382 187 326 8.6E-27 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 191 323 2.4E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 Gene3D G3DSA:1.20.58.760 400 605 4.5E-72 T 11-10-2018 AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 Gene3D G3DSA:3.40.50.300 144 323 4.0E-71 T 11-10-2018 AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 ProSitePatterns PS00674 AAA-protein family signature. 294 312 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 Pfam PF06480 FtsH Extracellular 8 92 3.5E-11 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 SUPERFAMILY SSF52540 147 394 1.18E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 596 6.8E-245 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 626 37.624 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 SUPERFAMILY SSF140990 405 606 4.71E-75 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AMS64_18815 11f99bfc492b5e489f33404396ffe591 648 Gene3D G3DSA:1.10.8.60 325 399 8.1E-29 T 11-10-2018 AMS64_15230 b072215bf03f2811af595b840168bd61 116 Gene3D G3DSA:3.30.428.10 1 111 1.6E-34 T 11-10-2018 IPR036265 HIT-like superfamily AMS64_15230 b072215bf03f2811af595b840168bd61 116 Pfam PF01230 HIT domain 12 108 3.6E-28 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AMS64_15230 b072215bf03f2811af595b840168bd61 116 SUPERFAMILY SSF54197 2 112 1.86E-33 T 11-10-2018 IPR036265 HIT-like superfamily AMS64_15230 b072215bf03f2811af595b840168bd61 116 PRINTS PR00332 Histidine triad family signature 6 22 1.8E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AMS64_15230 b072215bf03f2811af595b840168bd61 116 PRINTS PR00332 Histidine triad family signature 27 45 1.8E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AMS64_15230 b072215bf03f2811af595b840168bd61 116 PRINTS PR00332 Histidine triad family signature 95 105 1.8E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AMS64_15230 b072215bf03f2811af595b840168bd61 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 11-10-2018 IPR019808 Histidine triad, conserved site AMS64_13690 01ea3f845c6a02e6566a4db9a676b555 349 Gene3D G3DSA:2.40.50.100 54 196 4.4E-32 T 11-10-2018 AMS64_13690 01ea3f845c6a02e6566a4db9a676b555 349 SUPERFAMILY SSF111369 47 194 4.32E-20 T 11-10-2018 AMS64_13690 01ea3f845c6a02e6566a4db9a676b555 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 30 345 2.1E-54 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_13690 01ea3f845c6a02e6566a4db9a676b555 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 250 4.7E-10 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMS64_13690 01ea3f845c6a02e6566a4db9a676b555 349 Gene3D G3DSA:2.40.30.170 48 250 4.4E-32 T 11-10-2018 AMS64_13690 01ea3f845c6a02e6566a4db9a676b555 349 Gene3D G3DSA:2.40.420.20 255 346 6.2E-13 T 11-10-2018 AMS64_13690 01ea3f845c6a02e6566a4db9a676b555 349 Gene3D G3DSA:1.10.287.470 88 161 4.4E-32 T 11-10-2018 AMS64_21585 7e742fc9eeaadd1706f6f1594bdfb005 474 Gene3D G3DSA:3.40.190.10 36 274 4.2E-40 T 11-10-2018 AMS64_21585 7e742fc9eeaadd1706f6f1594bdfb005 474 Pfam PF01464 Transglycosylase SLT domain 307 416 1.5E-18 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AMS64_21585 7e742fc9eeaadd1706f6f1594bdfb005 474 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 323 351 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AMS64_21585 7e742fc9eeaadd1706f6f1594bdfb005 474 SMART SM00062 60 283 3.0E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_21585 7e742fc9eeaadd1706f6f1594bdfb005 474 SUPERFAMILY SSF53850 36 274 1.88E-27 T 11-10-2018 AMS64_21585 7e742fc9eeaadd1706f6f1594bdfb005 474 Gene3D G3DSA:1.10.530.10 300 467 3.2E-35 T 11-10-2018 AMS64_21585 7e742fc9eeaadd1706f6f1594bdfb005 474 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 66 272 1.4E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_21585 7e742fc9eeaadd1706f6f1594bdfb005 474 Gene3D G3DSA:3.40.190.10 135 240 4.2E-40 T 11-10-2018 AMS64_21585 7e742fc9eeaadd1706f6f1594bdfb005 474 SUPERFAMILY SSF53955 287 456 1.62E-33 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_19205 44ea77ade8fcc81e555bc4fcb726830a 69 PRINTS PR00050 Cold shock protein signature 42 60 4.7E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_19205 44ea77ade8fcc81e555bc4fcb726830a 69 PRINTS PR00050 Cold shock protein signature 27 36 4.7E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_19205 44ea77ade8fcc81e555bc4fcb726830a 69 PRINTS PR00050 Cold shock protein signature 7 22 4.7E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_19205 44ea77ade8fcc81e555bc4fcb726830a 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 11-10-2018 IPR019844 Cold-shock conserved site AMS64_19205 44ea77ade8fcc81e555bc4fcb726830a 69 PIRSF PIRSF002599 1 69 5.0E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMS64_19205 44ea77ade8fcc81e555bc4fcb726830a 69 SMART SM00357 6 69 3.5E-29 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMS64_19205 44ea77ade8fcc81e555bc4fcb726830a 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 7.7E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_19205 44ea77ade8fcc81e555bc4fcb726830a 69 SUPERFAMILY SSF50249 5 68 4.68E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_19205 44ea77ade8fcc81e555bc4fcb726830a 69 Gene3D G3DSA:2.40.50.140 5 68 5.7E-29 T 11-10-2018 AMS64_17615 e3cb4a6701f6a3c7e1bd93080af33f8e 169 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 3 153 1.2E-60 T 11-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AMS64_17615 e3cb4a6701f6a3c7e1bd93080af33f8e 169 SUPERFAMILY SSF102114 12 111 4.19E-8 T 11-10-2018 AMS64_17615 e3cb4a6701f6a3c7e1bd93080af33f8e 169 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AMS64_17615 e3cb4a6701f6a3c7e1bd93080af33f8e 169 Gene3D G3DSA:3.20.20.70 2 167 8.2E-22 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_17615 e3cb4a6701f6a3c7e1bd93080af33f8e 169 PIRSF PIRSF000368 1 163 1.8E-57 T 11-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AMS64_17615 e3cb4a6701f6a3c7e1bd93080af33f8e 169 Pfam PF13353 4Fe-4S single cluster domain 12 151 8.6E-51 T 11-10-2018 AMS64_08185 83c5aab5241011140e5e134b6bcb16f7 157 Pfam PF14539 Domain of unknown function (DUF4442) 17 105 1.9E-8 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 AMS64_08185 83c5aab5241011140e5e134b6bcb16f7 157 SUPERFAMILY SSF54637 12 135 4.85E-13 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_08185 83c5aab5241011140e5e134b6bcb16f7 157 Gene3D G3DSA:3.10.129.10 1 152 1.7E-23 T 11-10-2018 AMS64_13230 ba775a7bac33daebbab62699a3d1503f 493 Hamap MF_00190 Cardiolipin synthase A [clsA]. 11 493 50.595 T 11-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 AMS64_13230 ba775a7bac33daebbab62699a3d1503f 493 SUPERFAMILY SSF56024 281 479 2.18E-45 T 11-10-2018 AMS64_13230 ba775a7bac33daebbab62699a3d1503f 493 Pfam PF13091 PLD-like domain 145 256 5.0E-13 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AMS64_13230 ba775a7bac33daebbab62699a3d1503f 493 Pfam PF13091 PLD-like domain 336 457 4.4E-24 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AMS64_13230 ba775a7bac33daebbab62699a3d1503f 493 Pfam PF13396 Phospholipase_D-nuclease N-terminal 32 68 1.3E-4 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal AMS64_13230 ba775a7bac33daebbab62699a3d1503f 493 Gene3D G3DSA:3.30.870.10 124 312 3.3E-35 T 11-10-2018 AMS64_13230 ba775a7bac33daebbab62699a3d1503f 493 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 17 493 3.5E-127 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AMS64_13230 ba775a7bac33daebbab62699a3d1503f 493 SMART SM00155 228 255 1.5E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMS64_13230 ba775a7bac33daebbab62699a3d1503f 493 SMART SM00155 406 433 9.9E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMS64_13230 ba775a7bac33daebbab62699a3d1503f 493 SUPERFAMILY SSF56024 99 322 4.26E-49 T 11-10-2018 AMS64_13230 ba775a7bac33daebbab62699a3d1503f 493 Gene3D G3DSA:3.30.870.10 313 491 5.6E-30 T 11-10-2018 AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 Pfam PF13361 UvrD-like helicase C-terminal domain 444 655 1.0E-8 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 Gene3D G3DSA:1.10.3170.10 162 352 3.1E-152 T 11-10-2018 AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 SUPERFAMILY SSF52540 11 822 9.57E-105 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 Gene3D G3DSA:3.90.320.10 892 1189 3.0E-97 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 Gene3D G3DSA:3.40.50.300 5 439 3.1E-152 T 11-10-2018 AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 439 8.1E-61 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 Pfam PF13361 UvrD-like helicase C-terminal domain 730 809 5.6E-12 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 Gene3D G3DSA:1.10.486.10 582 727 5.1E-153 T 11-10-2018 AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 3 1185 22.684 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 Gene3D G3DSA:3.40.50.300 449 846 5.1E-153 T 11-10-2018 AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 SUPERFAMILY SSF52980 901 1185 5.31E-80 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 5 1184 0.0 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AMS64_02170 d1ac47a726263c5927b69321ce8cb400 1203 Pfam PF12705 PD-(D/E)XK nuclease superfamily 962 1161 4.4E-6 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AMS64_03060 528c801ef570c71caf99b54e588f3e5e 443 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 26 438 7.6E-187 T 11-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_03060 528c801ef570c71caf99b54e588f3e5e 443 Gene3D G3DSA:3.40.50.12240 17 442 9.2E-146 T 11-10-2018 AMS64_03060 528c801ef570c71caf99b54e588f3e5e 443 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 440 2.6E-165 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_03060 528c801ef570c71caf99b54e588f3e5e 443 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 360 1.3E-69 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_03060 528c801ef570c71caf99b54e588f3e5e 443 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 351 360 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_03060 528c801ef570c71caf99b54e588f3e5e 443 SUPERFAMILY SSF52540 97 366 6.62E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08025 b624937db5359adea88a74c9e3ee8a4b 162 Gene3D G3DSA:3.30.1330.60 25 161 4.8E-41 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_08025 b624937db5359adea88a74c9e3ee8a4b 162 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 122 141 7.7E-6 T 11-10-2018 AMS64_08025 b624937db5359adea88a74c9e3ee8a4b 162 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 142 162 7.7E-6 T 11-10-2018 AMS64_08025 b624937db5359adea88a74c9e3ee8a4b 162 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 7.7E-6 T 11-10-2018 AMS64_08025 b624937db5359adea88a74c9e3ee8a4b 162 Pfam PF00691 OmpA family 59 153 1.0E-19 T 11-10-2018 IPR006665 OmpA-like domain AMS64_08025 b624937db5359adea88a74c9e3ee8a4b 162 SUPERFAMILY SSF103088 40 159 6.28E-32 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_08025 b624937db5359adea88a74c9e3ee8a4b 162 PRINTS PR01021 OMPA domain signature 104 120 2.2E-11 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_08025 b624937db5359adea88a74c9e3ee8a4b 162 PRINTS PR01021 OMPA domain signature 59 81 2.2E-11 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_08025 b624937db5359adea88a74c9e3ee8a4b 162 PRINTS PR01021 OMPA domain signature 89 104 2.2E-11 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_06710 ad3a4282a46a8a2ea978881c49d1eeb6 223 SUPERFAMILY SSF51206 15 142 2.49E-19 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMS64_06710 ad3a4282a46a8a2ea978881c49d1eeb6 223 Pfam PF00027 Cyclic nucleotide-binding domain 34 115 6.9E-13 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_06710 ad3a4282a46a8a2ea978881c49d1eeb6 223 SMART SM00100 14 134 5.9E-6 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_06710 ad3a4282a46a8a2ea978881c49d1eeb6 223 Gene3D G3DSA:2.60.120.10 13 151 3.1E-17 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_13190 9a17bcad7f7d2ed4143d76da63007029 323 PIRSF PIRSF029038 10 323 2.1E-141 T 11-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AMS64_13190 9a17bcad7f7d2ed4143d76da63007029 323 Pfam PF05971 Protein of unknown function (DUF890) 16 311 7.0E-128 T 11-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 AMS64_13190 9a17bcad7f7d2ed4143d76da63007029 323 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 17 313 55.312 T 11-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AMS64_13190 9a17bcad7f7d2ed4143d76da63007029 323 SUPERFAMILY SSF53335 56 310 2.81E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_13190 9a17bcad7f7d2ed4143d76da63007029 323 Gene3D G3DSA:3.40.50.150 51 311 5.8E-78 T 11-10-2018 AMS64_00535 78f5111105d1147ee04b444f391a3b2d 156 SUPERFAMILY SSF81573 63 121 1.06E-14 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AMS64_00535 78f5111105d1147ee04b444f391a3b2d 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.9E-55 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AMS64_00535 78f5111105d1147ee04b444f391a3b2d 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 7.0E-36 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMS64_00535 78f5111105d1147ee04b444f391a3b2d 156 Gene3D G3DSA:1.20.5.620 62 122 1.1E-22 T 11-10-2018 AMS64_00535 78f5111105d1147ee04b444f391a3b2d 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.851 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMS64_19315 faf29dfea2fc58a21c1d0c7f60dbd98a 336 Gene3D G3DSA:3.30.200.20 2 87 3.5E-11 T 11-10-2018 AMS64_19315 faf29dfea2fc58a21c1d0c7f60dbd98a 336 SUPERFAMILY SSF56112 8 310 1.48E-41 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMS64_19315 faf29dfea2fc58a21c1d0c7f60dbd98a 336 Gene3D G3DSA:3.90.1200.10 88 330 1.3E-67 T 11-10-2018 AMS64_19315 faf29dfea2fc58a21c1d0c7f60dbd98a 336 Pfam PF01636 Phosphotransferase enzyme family 24 241 1.6E-21 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AMS64_11640 038395b74eadcf46026ef07c0fd3beda 172 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 24.899 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AMS64_11640 038395b74eadcf46026ef07c0fd3beda 172 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 2.8E-40 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AMS64_11640 038395b74eadcf46026ef07c0fd3beda 172 SMART SM00271 1 66 3.3E-6 T 11-10-2018 IPR001623 DnaJ domain AMS64_11640 038395b74eadcf46026ef07c0fd3beda 172 SUPERFAMILY SSF47144 78 170 6.28E-22 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AMS64_11640 038395b74eadcf46026ef07c0fd3beda 172 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 2.4E-15 T 11-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AMS64_11640 038395b74eadcf46026ef07c0fd3beda 172 Gene3D G3DSA:1.10.287.110 1 79 3.3E-23 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMS64_11640 038395b74eadcf46026ef07c0fd3beda 172 SUPERFAMILY SSF46565 1 74 1.27E-16 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMS64_11640 038395b74eadcf46026ef07c0fd3beda 172 Gene3D G3DSA:1.20.1280.20 80 171 8.5E-25 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AMS64_03765 fd351fff17ecb44919ce8cf223fc2717 542 SUPERFAMILY SSF51011 471 539 1.87E-7 T 11-10-2018 AMS64_03765 fd351fff17ecb44919ce8cf223fc2717 542 Gene3D G3DSA:3.20.20.80 202 458 1.5E-32 T 11-10-2018 AMS64_03765 fd351fff17ecb44919ce8cf223fc2717 542 SMART SM00642 66 453 6.8E-38 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_03765 fd351fff17ecb44919ce8cf223fc2717 542 Gene3D G3DSA:2.60.40.1180 459 540 8.9E-8 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMS64_03765 fd351fff17ecb44919ce8cf223fc2717 542 SUPERFAMILY SSF51445 61 463 1.26E-71 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_03765 fd351fff17ecb44919ce8cf223fc2717 542 Gene3D G3DSA:3.20.20.80 57 185 4.2E-37 T 11-10-2018 AMS64_03765 fd351fff17ecb44919ce8cf223fc2717 542 Pfam PF00128 Alpha amylase, catalytic domain 206 396 1.3E-16 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_03765 fd351fff17ecb44919ce8cf223fc2717 542 Pfam PF00128 Alpha amylase, catalytic domain 92 177 1.0E-24 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_10855 f873b833336945ab0750dccfc22dd26c 436 Gene3D G3DSA:1.10.3120.10 116 418 7.0E-103 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 AMS64_10855 f873b833336945ab0750dccfc22dd26c 436 PIRSF PIRSF003095 1 434 1.7E-121 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AMS64_10855 f873b833336945ab0750dccfc22dd26c 436 SUPERFAMILY SSF102735 1 129 2.22E-38 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AMS64_10855 f873b833336945ab0750dccfc22dd26c 436 TIGRFAM TIGR00115 tig: trigger factor 11 413 6.8E-140 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AMS64_10855 f873b833336945ab0750dccfc22dd26c 436 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 9.4E-41 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMS64_10855 f873b833336945ab0750dccfc22dd26c 436 SUPERFAMILY SSF109998 248 430 8.37E-50 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AMS64_10855 f873b833336945ab0750dccfc22dd26c 436 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 230 1.1E-14 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMS64_10855 f873b833336945ab0750dccfc22dd26c 436 SUPERFAMILY SSF54534 89 241 7.66E-36 T 11-10-2018 AMS64_10855 f873b833336945ab0750dccfc22dd26c 436 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 413 1.6E-38 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AMS64_10855 f873b833336945ab0750dccfc22dd26c 436 Gene3D G3DSA:3.30.70.1050 1 115 9.1E-40 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AMS64_10855 f873b833336945ab0750dccfc22dd26c 436 Hamap MF_00303 Trigger factor [tig]. 1 419 21.058 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AMS64_10855 f873b833336945ab0750dccfc22dd26c 436 Gene3D G3DSA:3.10.50.40 150 246 7.0E-103 T 11-10-2018 AMS64_11325 2ef10f9278d27d8bb401d74c90823426 167 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 10 160 7.2E-56 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AMS64_11325 2ef10f9278d27d8bb401d74c90823426 167 PIRSF PIRSF028301 3 167 1.6E-60 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AMS64_11325 2ef10f9278d27d8bb401d74c90823426 167 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 9 161 7.6E-54 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Gene3D G3DSA:2.40.50.150 806 929 9.9E-44 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Gene3D G3DSA:2.40.270.10 1008 1215 1.3E-87 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Pfam PF04563 RNA polymerase beta subunit 2 473 4.6E-54 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Gene3D G3DSA:3.90.1100.10 413 599 2.6E-70 T 11-10-2018 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Pfam PF04565 RNA polymerase Rpb2, domain 3 486 553 6.6E-30 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Gene3D G3DSA:2.40.50.100 687 761 4.0E-32 T 11-10-2018 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Gene3D G3DSA:2.40.270.10 763 805 4.6E-7 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Pfam PF00562 RNA polymerase Rpb2, domain 6 690 1237 2.5E-155 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Pfam PF04560 RNA polymerase Rpb2, domain 7 1239 1313 3.5E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1036 1048 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Pfam PF10385 RNA polymerase beta subunit external 1 domain 564 629 1.7E-23 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Gene3D G3DSA:3.90.1100.10 1 148 9.3E-55 T 11-10-2018 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Gene3D G3DSA:3.90.1100.10 618 686 3.6E-21 T 11-10-2018 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Pfam PF04561 RNA polymerase Rpb2, domain 2 312 427 2.2E-17 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Pfam PF04561 RNA polymerase Rpb2, domain 2 125 195 9.7E-6 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 1 1312 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Gene3D G3DSA:3.90.1800.10 1225 1279 7.9E-11 T 11-10-2018 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 SUPERFAMILY SSF64484 2 1313 0.0 T 11-10-2018 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Gene3D G3DSA:3.90.1110.10 274 412 3.6E-36 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21740 71bdea865c70b469797bfeceae1b12c0 1315 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 1 1315 12.135 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_00210 9222d03f4f33c90128f17572f5eefe8b 337 Gene3D G3DSA:3.40.50.620 6 325 4.3E-101 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_00210 9222d03f4f33c90128f17572f5eefe8b 337 Gene3D G3DSA:1.10.240.10 184 298 4.3E-101 T 11-10-2018 AMS64_00210 9222d03f4f33c90128f17572f5eefe8b 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_00210 9222d03f4f33c90128f17572f5eefe8b 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 2.4E-20 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMS64_00210 9222d03f4f33c90128f17572f5eefe8b 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.4E-20 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMS64_00210 9222d03f4f33c90128f17572f5eefe8b 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.4E-20 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMS64_00210 9222d03f4f33c90128f17572f5eefe8b 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 197 207 2.4E-20 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMS64_00210 9222d03f4f33c90128f17572f5eefe8b 337 SUPERFAMILY SSF52374 5 330 8.35E-77 T 11-10-2018 AMS64_00210 9222d03f4f33c90128f17572f5eefe8b 337 Pfam PF00579 tRNA synthetases class I (W and Y) 4 285 1.3E-51 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_00210 9222d03f4f33c90128f17572f5eefe8b 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 2.1E-69 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMS64_16125 7ed868025fe1c8556b55170e1b7535ba 381 SUPERFAMILY SSF51556 54 350 9.28E-98 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_16125 7ed868025fe1c8556b55170e1b7535ba 381 Gene3D G3DSA:3.20.20.140 55 344 6.5E-134 T 11-10-2018 AMS64_16125 7ed868025fe1c8556b55170e1b7535ba 381 Pfam PF01979 Amidohydrolase family 51 377 4.2E-40 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMS64_16125 7ed868025fe1c8556b55170e1b7535ba 381 Gene3D G3DSA:2.30.40.10 6 376 6.5E-134 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_16125 7ed868025fe1c8556b55170e1b7535ba 381 SUPERFAMILY SSF51338 1 53 1.0E-15 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_16125 7ed868025fe1c8556b55170e1b7535ba 381 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 376 1.3E-141 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AMS64_16125 7ed868025fe1c8556b55170e1b7535ba 381 PIRSF PIRSF038994 1 381 6.2E-114 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AMS64_22475 d808965307e3756a5f1afcac8e48ad61 506 Gene3D G3DSA:3.40.50.1100 52 148 1.2E-131 T 11-10-2018 AMS64_22475 d808965307e3756a5f1afcac8e48ad61 506 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 307 9.2E-83 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMS64_22475 d808965307e3756a5f1afcac8e48ad61 506 Gene3D G3DSA:3.40.50.1100 16 318 1.2E-131 T 11-10-2018 AMS64_22475 d808965307e3756a5f1afcac8e48ad61 506 SUPERFAMILY SSF55021 411 504 1.49E-25 T 11-10-2018 AMS64_22475 d808965307e3756a5f1afcac8e48ad61 506 Gene3D G3DSA:3.40.1020.10 329 506 1.8E-67 T 11-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AMS64_22475 d808965307e3756a5f1afcac8e48ad61 506 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 6 504 5.0E-237 T 11-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AMS64_22475 d808965307e3756a5f1afcac8e48ad61 506 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 44 57 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMS64_22475 d808965307e3756a5f1afcac8e48ad61 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 419 504 1.4E-22 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AMS64_22475 d808965307e3756a5f1afcac8e48ad61 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 320 410 1.6E-22 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AMS64_22475 d808965307e3756a5f1afcac8e48ad61 506 SUPERFAMILY SSF53686 16 355 7.33E-103 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMS64_08835 66ba1efb43097ed8527dee09be30716a 239 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 7 238 2.4E-60 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AMS64_08835 66ba1efb43097ed8527dee09be30716a 239 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 4 103 3.4E-21 T 11-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AMS64_08835 66ba1efb43097ed8527dee09be30716a 239 Gene3D G3DSA:2.160.20.70 133 239 1.1E-31 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 AMS64_08835 66ba1efb43097ed8527dee09be30716a 239 Gene3D G3DSA:3.30.750.120 2 115 3.7E-35 T 11-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily AMS64_08835 66ba1efb43097ed8527dee09be30716a 239 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 138 235 4.5E-31 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AMS64_08835 66ba1efb43097ed8527dee09be30716a 239 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 239 26.431 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AMS64_08835 66ba1efb43097ed8527dee09be30716a 239 SUPERFAMILY SSF63848 134 238 3.53E-30 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 AMS64_10050 09b74a5586ced0edd65830bf1f175983 428 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 428 6.9E-132 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMS64_10050 09b74a5586ced0edd65830bf1f175983 428 Gene3D G3DSA:2.40.160.60 25 428 3.2E-141 T 11-10-2018 AMS64_10050 09b74a5586ced0edd65830bf1f175983 428 SUPERFAMILY SSF56935 25 428 1.01E-100 T 11-10-2018 AMS64_11145 081ca62a16cec4e3f1a83a542a641d83 163 Gene3D G3DSA:1.10.10.10 2 64 8.0E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_11145 081ca62a16cec4e3f1a83a542a641d83 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 9.0E-23 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMS64_11145 081ca62a16cec4e3f1a83a542a641d83 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 9.0E-23 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMS64_11145 081ca62a16cec4e3f1a83a542a641d83 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 9.0E-23 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMS64_11145 081ca62a16cec4e3f1a83a542a641d83 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 5.8E-22 T 11-10-2018 AMS64_11145 081ca62a16cec4e3f1a83a542a641d83 163 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMS64_11145 081ca62a16cec4e3f1a83a542a641d83 163 SUPERFAMILY SSF46785 11 69 3.22E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_11145 081ca62a16cec4e3f1a83a542a641d83 163 SUPERFAMILY SSF54909 73 156 1.88E-21 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMS64_11145 081ca62a16cec4e3f1a83a542a641d83 163 Gene3D G3DSA:3.30.70.920 65 148 5.2E-25 T 11-10-2018 AMS64_11145 081ca62a16cec4e3f1a83a542a641d83 163 SMART SM00344 11 120 1.4E-54 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMS64_11145 081ca62a16cec4e3f1a83a542a641d83 163 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 4.3E-24 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMS64_10310 5b40ba120b8135e3c50bc0ddef3b22bc 334 Pfam PF00586 AIR synthase related protein, N-terminal domain 36 146 9.5E-17 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AMS64_10310 5b40ba120b8135e3c50bc0ddef3b22bc 334 SUPERFAMILY SSF56042 157 329 1.94E-39 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMS64_10310 5b40ba120b8135e3c50bc0ddef3b22bc 334 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 4 334 6.4E-128 T 11-10-2018 IPR011854 Carbamoyl dehydratase HypE AMS64_10310 5b40ba120b8135e3c50bc0ddef3b22bc 334 SUPERFAMILY SSF55326 3 148 2.97E-33 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMS64_10310 5b40ba120b8135e3c50bc0ddef3b22bc 334 PIRSF PIRSF005644 1 334 1.4E-116 T 11-10-2018 IPR011854 Carbamoyl dehydratase HypE AMS64_10310 5b40ba120b8135e3c50bc0ddef3b22bc 334 Gene3D G3DSA:3.90.650.10 155 334 3.1E-47 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMS64_10310 5b40ba120b8135e3c50bc0ddef3b22bc 334 Pfam PF02769 AIR synthase related protein, C-terminal domain 162 312 3.9E-22 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AMS64_10310 5b40ba120b8135e3c50bc0ddef3b22bc 334 Gene3D G3DSA:3.30.1330.10 6 149 7.9E-50 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMS64_03425 895a19693656913300797e95715ebeeb 169 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 1.1E-24 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_03425 895a19693656913300797e95715ebeeb 169 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 85 96 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_03425 895a19693656913300797e95715ebeeb 169 SUPERFAMILY SSF55083 1 153 2.09E-43 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_03425 895a19693656913300797e95715ebeeb 169 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 5.7E-28 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_03425 895a19693656913300797e95715ebeeb 169 Gene3D G3DSA:3.30.70.560 1 155 1.2E-37 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_18675 a1d3366fc7f9a139521aad1cc6829556 157 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 155 40.922 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AMS64_18675 a1d3366fc7f9a139521aad1cc6829556 157 Gene3D G3DSA:1.10.10.10 74 157 2.2E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_18675 a1d3366fc7f9a139521aad1cc6829556 157 Gene3D G3DSA:3.30.160.70 1 70 3.1E-14 T 11-10-2018 AMS64_18675 a1d3366fc7f9a139521aad1cc6829556 157 SUPERFAMILY SSF46767 74 154 2.75E-33 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AMS64_18675 a1d3366fc7f9a139521aad1cc6829556 157 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 155 5.3E-34 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMS64_18675 a1d3366fc7f9a139521aad1cc6829556 157 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 71 1.0E-8 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMS64_18675 a1d3366fc7f9a139521aad1cc6829556 157 SUPERFAMILY SSF53155 4 79 6.47E-13 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMS64_18675 a1d3366fc7f9a139521aad1cc6829556 157 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMS64_18675 a1d3366fc7f9a139521aad1cc6829556 157 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 1.5E-38 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMS64_09800 a7ab6fb73d3d0f9369d589b6abb7b75a 413 PIRSF PIRSF000447 1 413 1.3E-200 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AMS64_09800 a7ab6fb73d3d0f9369d589b6abb7b75a 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.3E-203 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AMS64_09800 a7ab6fb73d3d0f9369d589b6abb7b75a 413 SMART SM00825 Beta-ketoacyl synthase 6 413 2.1E-17 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMS64_09800 a7ab6fb73d3d0f9369d589b6abb7b75a 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 248 1.9E-65 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMS64_09800 a7ab6fb73d3d0f9369d589b6abb7b75a 413 Gene3D G3DSA:3.40.47.10 1 256 1.6E-91 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_09800 a7ab6fb73d3d0f9369d589b6abb7b75a 413 Gene3D G3DSA:3.40.47.10 258 402 2.1E-57 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_09800 a7ab6fb73d3d0f9369d589b6abb7b75a 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 256 370 1.5E-40 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMS64_09800 a7ab6fb73d3d0f9369d589b6abb7b75a 413 SUPERFAMILY SSF53901 3 253 1.21E-81 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_09800 a7ab6fb73d3d0f9369d589b6abb7b75a 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AMS64_09800 a7ab6fb73d3d0f9369d589b6abb7b75a 413 SUPERFAMILY SSF53901 216 412 1.92E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 SUPERFAMILY SSF51621 249 549 6.81E-113 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 SUPERFAMILY SSF52009 125 246 1.44E-36 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.2E-30 T 11-10-2018 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.2E-30 T 11-10-2018 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.2E-30 T 11-10-2018 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.2E-30 T 11-10-2018 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 SUPERFAMILY SSF47831 23 143 1.96E-34 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 Gene3D G3DSA:1.10.274.10 21 146 9.8E-83 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 PIRSF PIRSF000732 1 574 7.3E-223 T 11-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.6E-22 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 Gene3D G3DSA:3.50.30.10 4 233 9.8E-83 T 11-10-2018 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 5.1E-249 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 541 2.3E-127 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.6E-32 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMS64_17170 fcd0babefa758a6e1f931db9f606a5ba 575 Gene3D G3DSA:3.20.20.60 234 575 1.5E-129 T 11-10-2018 AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 Gene3D G3DSA:3.40.250.10 28 131 7.1E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 Gene3D G3DSA:3.40.250.10 281 431 3.4E-41 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 SMART SM00450 143 264 1.9E-13 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 SMART SM00450 27 134 0.064 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 SMART SM00450 291 419 2.6E-10 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 ProSitePatterns PS00380 Rhodanese signature 1. 178 189 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 Pfam PF00581 Rhodanese-like domain 293 415 3.1E-10 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 Pfam PF00581 Rhodanese-like domain 35 127 2.9E-5 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 Pfam PF00581 Rhodanese-like domain 167 258 1.3E-13 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 Gene3D G3DSA:3.40.250.10 136 280 2.8E-37 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 SUPERFAMILY SSF52821 38 131 1.02E-10 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 SUPERFAMILY SSF52821 162 318 2.1E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_06030 aeaafb370dd19fdd27cf75d4c577f5e7 431 SUPERFAMILY SSF52821 284 429 7.73E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_11340 9a380eb2af0477cdc09cc6ff53df0387 445 SMART SM01154 38 415 6.5E-182 T 11-10-2018 IPR012548 Protein of unknown function DUF1704 AMS64_11340 9a380eb2af0477cdc09cc6ff53df0387 445 Pfam PF08014 Domain of unknown function (DUF1704) 39 411 4.9E-129 T 11-10-2018 IPR012548 Protein of unknown function DUF1704 AMS64_11340 9a380eb2af0477cdc09cc6ff53df0387 445 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 19 407 2.6E-113 T 11-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA AMS64_09575 0c90ef893dec48dc5b2af3bfa5d335fd 658 Pfam PF13654 AAA domain 25 124 2.9E-6 T 11-10-2018 AMS64_09575 0c90ef893dec48dc5b2af3bfa5d335fd 658 Pfam PF13654 AAA domain 166 396 1.7E-48 T 11-10-2018 AMS64_09575 0c90ef893dec48dc5b2af3bfa5d335fd 658 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 508 612 8.7E-8 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AMS64_09575 0c90ef893dec48dc5b2af3bfa5d335fd 658 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 422 438 2.6E-7 T 11-10-2018 AMS64_09575 0c90ef893dec48dc5b2af3bfa5d335fd 658 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 505 524 2.6E-7 T 11-10-2018 AMS64_09575 0c90ef893dec48dc5b2af3bfa5d335fd 658 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 535 554 2.6E-7 T 11-10-2018 AMS64_09575 0c90ef893dec48dc5b2af3bfa5d335fd 658 SUPERFAMILY SSF52540 177 392 1.79E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09575 0c90ef893dec48dc5b2af3bfa5d335fd 658 Gene3D G3DSA:3.30.230.10 399 640 8.9E-92 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_09575 0c90ef893dec48dc5b2af3bfa5d335fd 658 SUPERFAMILY SSF54211 420 615 7.21E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_09575 0c90ef893dec48dc5b2af3bfa5d335fd 658 Gene3D G3DSA:3.40.50.300 3 308 5.5E-36 T 11-10-2018 AMS64_09575 0c90ef893dec48dc5b2af3bfa5d335fd 658 Gene3D G3DSA:1.10.8.60 309 393 4.2E-5 T 11-10-2018 AMS64_02865 4c3fdd707d6b7ca6bf4defbba9f25d02 379 PIRSF PIRSF039004 1 378 4.9E-137 T 11-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 AMS64_02865 4c3fdd707d6b7ca6bf4defbba9f25d02 379 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 2 366 1.7E-172 T 11-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 AMS64_02865 4c3fdd707d6b7ca6bf4defbba9f25d02 379 Gene3D G3DSA:2.30.40.10 5 364 7.9E-119 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_02865 4c3fdd707d6b7ca6bf4defbba9f25d02 379 Pfam PF01979 Amidohydrolase family 51 344 1.5E-9 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMS64_02865 4c3fdd707d6b7ca6bf4defbba9f25d02 379 SUPERFAMILY SSF51556 53 318 4.45E-68 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_02865 4c3fdd707d6b7ca6bf4defbba9f25d02 379 SUPERFAMILY SSF51338 1 366 1.06E-18 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_02865 4c3fdd707d6b7ca6bf4defbba9f25d02 379 Gene3D G3DSA:3.20.20.140 53 318 7.9E-119 T 11-10-2018 AMS64_21350 da008feeac57d98ed4e0d4ced4ea38ae 296 Gene3D G3DSA:2.40.10.340 121 266 1.6E-35 T 11-10-2018 AMS64_21350 da008feeac57d98ed4e0d4ced4ea38ae 296 PIRSF PIRSF038471 2 284 1.4E-80 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AMS64_21350 da008feeac57d98ed4e0d4ced4ea38ae 296 Pfam PF04085 rod shape-determining protein MreC 125 269 1.3E-38 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AMS64_21350 da008feeac57d98ed4e0d4ced4ea38ae 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 276 3.6E-86 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AMS64_21350 da008feeac57d98ed4e0d4ced4ea38ae 296 Gene3D G3DSA:2.40.10.350 180 257 1.6E-35 T 11-10-2018 AMS64_18970 c488c7a4e2535e6ce113535a9720c94e 222 Gene3D G3DSA:1.20.120.1820 4 126 5.6E-32 T 11-10-2018 AMS64_18970 c488c7a4e2535e6ce113535a9720c94e 222 Gene3D G3DSA:1.20.1280.20 129 219 8.4E-19 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AMS64_18970 c488c7a4e2535e6ce113535a9720c94e 222 Pfam PF02613 Nitrate reductase delta subunit 51 181 8.2E-35 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone AMS64_18970 c488c7a4e2535e6ce113535a9720c94e 222 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 30.895 T 11-10-2018 IPR023069 Chaperone TorD AMS64_18970 c488c7a4e2535e6ce113535a9720c94e 222 SUPERFAMILY SSF89155 8 217 6.28E-44 T 11-10-2018 IPR036411 TorD-like superfamily AMS64_05085 db2bad5d41e69084c80fd38cc968bf22 413 Pfam PF00924 Mechanosensitive ion channel 143 397 2.2E-54 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMS64_05085 db2bad5d41e69084c80fd38cc968bf22 413 SUPERFAMILY SSF50182 187 252 2.98E-11 T 11-10-2018 IPR010920 LSM domain superfamily AMS64_12975 2ae9ee6db46210c12e6ce8fce14cc785 712 Pfam PF00990 Diguanylate cyclase, GGDEF domain 555 705 9.4E-31 T 11-10-2018 IPR000160 GGDEF domain AMS64_12975 2ae9ee6db46210c12e6ce8fce14cc785 712 SUPERFAMILY SSF55073 560 705 4.0E-31 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_12975 2ae9ee6db46210c12e6ce8fce14cc785 712 Gene3D G3DSA:3.30.70.270 553 711 3.0E-37 T 11-10-2018 AMS64_12975 2ae9ee6db46210c12e6ce8fce14cc785 712 SMART SM00267 544 711 1.1E-31 T 11-10-2018 IPR000160 GGDEF domain AMS64_12975 2ae9ee6db46210c12e6ce8fce14cc785 712 Gene3D G3DSA:1.20.1480.50 270 370 2.6E-5 T 11-10-2018 AMS64_12975 2ae9ee6db46210c12e6ce8fce14cc785 712 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 551 705 1.1E-27 T 11-10-2018 IPR000160 GGDEF domain AMS64_02655 1b1f00bd28a8e6c73c331e354004ae90 306 Pfam PF04392 ABC transporter substrate binding protein 31 288 3.7E-29 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein AMS64_02655 1b1f00bd28a8e6c73c331e354004ae90 306 Gene3D G3DSA:3.40.50.2300 31 283 9.5E-32 T 11-10-2018 AMS64_02655 1b1f00bd28a8e6c73c331e354004ae90 306 Gene3D G3DSA:3.40.50.2300 131 287 9.5E-32 T 11-10-2018 AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 Pfam PF02954 Bacterial regulatory protein, Fis family 422 458 1.8E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 SUPERFAMILY SSF52172 5 189 4.98E-45 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 Gene3D G3DSA:3.40.50.300 136 316 5.6E-64 T 11-10-2018 AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 SMART SM00448 6 117 4.3E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 Gene3D G3DSA:3.40.50.2300 3 135 2.3E-36 T 11-10-2018 AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 SMART SM00382 165 308 6.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 Pfam PF00072 Response regulator receiver domain 8 117 5.1E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 SUPERFAMILY SSF46689 358 458 4.3E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 SUPERFAMILY SSF52540 145 388 3.64E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 Gene3D G3DSA:1.10.8.60 317 394 1.4E-23 T 11-10-2018 AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 Pfam PF00158 Sigma-54 interaction domain 146 311 9.4E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMS64_05750 ca7f75421733b942352ca0cbd7753cdf 468 Gene3D G3DSA:1.10.10.60 416 459 6.3E-10 T 11-10-2018 AMS64_12855 e21f9edf218b5627530d87bc7c0d3ad2 417 Gene3D G3DSA:3.40.718.10 1 417 1.3E-185 T 11-10-2018 AMS64_12855 e21f9edf218b5627530d87bc7c0d3ad2 417 SUPERFAMILY SSF53659 4 417 2.11E-145 T 11-10-2018 AMS64_12855 e21f9edf218b5627530d87bc7c0d3ad2 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 411 2.0E-114 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMS64_12855 e21f9edf218b5627530d87bc7c0d3ad2 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 6.6E-231 T 11-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMS64_12855 e21f9edf218b5627530d87bc7c0d3ad2 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AMS64_12855 e21f9edf218b5627530d87bc7c0d3ad2 417 SMART SM01329 29 413 9.1E-174 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMS64_22260 c1c8d2c4dc6227592fb1d6220523ceb3 215 Gene3D G3DSA:3.40.50.300 1 214 5.8E-43 T 11-10-2018 AMS64_22260 c1c8d2c4dc6227592fb1d6220523ceb3 215 PIRSF PIRSF009320 1 213 2.1E-33 T 11-10-2018 AMS64_22260 c1c8d2c4dc6227592fb1d6220523ceb3 215 SUPERFAMILY SSF52540 1 212 4.74E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_22260 c1c8d2c4dc6227592fb1d6220523ceb3 215 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 184 1.5E-10 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMS64_01650 7e7e5c0682a170face5597c6d8bd586f 139 Gene3D G3DSA:2.40.128.270 32 134 1.5E-26 T 11-10-2018 IPR038670 HslJ-like superfamily AMS64_01650 7e7e5c0682a170face5597c6d8bd586f 139 Pfam PF03724 META domain 26 129 1.3E-23 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AMS64_08935 f589398934fc75ad5a20ab1ee3c0bde0 395 Gene3D G3DSA:3.40.50.1370 167 362 1.0E-229 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMS64_08935 f589398934fc75ad5a20ab1ee3c0bde0 395 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 5 393 2.8E-200 T 11-10-2018 IPR017702 Putative carbamoyltransferase YgeW AMS64_08935 f589398934fc75ad5a20ab1ee3c0bde0 395 SUPERFAMILY SSF53671 18 373 5.11E-57 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMS64_08935 f589398934fc75ad5a20ab1ee3c0bde0 395 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 177 3.4E-24 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMS64_08935 f589398934fc75ad5a20ab1ee3c0bde0 395 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 186 373 7.5E-42 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMS64_08935 f589398934fc75ad5a20ab1ee3c0bde0 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 322 331 2.7E-8 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_08935 f589398934fc75ad5a20ab1ee3c0bde0 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 340 363 2.7E-8 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_08935 f589398934fc75ad5a20ab1ee3c0bde0 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 2.7E-8 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_08935 f589398934fc75ad5a20ab1ee3c0bde0 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 4.4E-7 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_08935 f589398934fc75ad5a20ab1ee3c0bde0 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 4.4E-7 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_08935 f589398934fc75ad5a20ab1ee3c0bde0 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 163 180 4.4E-7 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_08935 f589398934fc75ad5a20ab1ee3c0bde0 395 Gene3D G3DSA:3.40.50.1370 5 392 1.0E-229 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 Pfam PF01464 Transglycosylase SLT domain 121 220 1.5E-25 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 SUPERFAMILY SSF54106 411 456 1.1E-10 T 11-10-2018 AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 SMART SM00257 468 512 1.3E-9 T 11-10-2018 IPR018392 LysM domain AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 SMART SM00257 339 382 9.3E-15 T 11-10-2018 IPR018392 LysM domain AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 SMART SM00257 412 456 3.0E-12 T 11-10-2018 IPR018392 LysM domain AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 Gene3D G3DSA:3.10.350.10 336 388 6.7E-17 T 11-10-2018 IPR036779 LysM domain superfamily AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 Gene3D G3DSA:3.10.350.10 409 463 2.4E-15 T 11-10-2018 IPR036779 LysM domain superfamily AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 Gene3D G3DSA:3.10.350.10 464 517 1.5E-13 T 11-10-2018 IPR036779 LysM domain superfamily AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 SUPERFAMILY SSF54106 467 511 1.31E-9 T 11-10-2018 AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 SUPERFAMILY SSF54106 339 382 4.97E-11 T 11-10-2018 AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 SUPERFAMILY SSF53955 106 257 1.05E-41 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 Gene3D G3DSA:1.10.530.10 104 258 2.6E-33 T 11-10-2018 AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 128 156 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 Pfam PF01476 LysM domain 469 511 6.8E-11 T 11-10-2018 IPR018392 LysM domain AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 Pfam PF01476 LysM domain 340 382 3.5E-13 T 11-10-2018 IPR018392 LysM domain AMS64_13115 26c65385d16a2a51218979a5c33a7713 517 Pfam PF01476 LysM domain 413 455 1.1E-11 T 11-10-2018 IPR018392 LysM domain AMS64_01655 33f57a6e67ffc0c57b9b614c3de82c9d 453 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 215 228 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMS64_01655 33f57a6e67ffc0c57b9b614c3de82c9d 453 SUPERFAMILY SSF53067 1 205 3.88E-25 T 11-10-2018 AMS64_01655 33f57a6e67ffc0c57b9b614c3de82c9d 453 Pfam PF00012 Hsp70 protein 131 262 8.3E-14 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_01655 33f57a6e67ffc0c57b9b614c3de82c9d 453 Pfam PF00012 Hsp70 protein 335 442 1.2E-5 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_01655 33f57a6e67ffc0c57b9b614c3de82c9d 453 SUPERFAMILY SSF53067 210 449 3.69E-29 T 11-10-2018 AMS64_01655 33f57a6e67ffc0c57b9b614c3de82c9d 453 Gene3D G3DSA:3.90.640.10 334 380 6.0E-14 T 11-10-2018 AMS64_01655 33f57a6e67ffc0c57b9b614c3de82c9d 453 Gene3D G3DSA:3.30.420.40 381 435 6.0E-14 T 11-10-2018 AMS64_06275 aa69f8de1e9e7e67de2e48ad76831e67 576 Gene3D G3DSA:3.90.1640.30 47 324 2.4E-86 T 11-10-2018 AMS64_06275 aa69f8de1e9e7e67de2e48ad76831e67 576 Pfam PF02272 DHHA1 domain 321 451 1.9E-26 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AMS64_06275 aa69f8de1e9e7e67de2e48ad76831e67 576 Gene3D G3DSA:3.10.310.30 325 455 1.6E-31 T 11-10-2018 AMS64_06275 aa69f8de1e9e7e67de2e48ad76831e67 576 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 21 570 2.8E-155 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AMS64_06275 aa69f8de1e9e7e67de2e48ad76831e67 576 SUPERFAMILY SSF64182 46 464 6.28E-119 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AMS64_06275 aa69f8de1e9e7e67de2e48ad76831e67 576 Pfam PF01368 DHH family 73 199 5.5E-9 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMS64_02560 2cd7c52e86936af17300effdcfb6a32f 162 Pfam PF06892 Phage regulatory protein CII (CP76) 11 159 6.2E-31 T 11-10-2018 IPR009679 Bacteriophage 186, CII AMS64_18530 e130be911d2cad66d39657738f85495b 419 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 356 3.7E-13 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMS64_18530 e130be911d2cad66d39657738f85495b 419 Gene3D G3DSA:3.30.70.270 3 154 2.3E-43 T 11-10-2018 AMS64_18530 e130be911d2cad66d39657738f85495b 419 SUPERFAMILY SSF56672 1 236 2.94E-65 T 11-10-2018 AMS64_18530 e130be911d2cad66d39657738f85495b 419 Gene3D G3DSA:2.30.40.20 11 74 2.3E-43 T 11-10-2018 AMS64_18530 e130be911d2cad66d39657738f85495b 419 Pfam PF13438 Domain of unknown function (DUF4113) 369 418 7.9E-20 T 11-10-2018 IPR025188 Domain of unknown function DUF4113 AMS64_18530 e130be911d2cad66d39657738f85495b 419 Pfam PF00817 impB/mucB/samB family 6 150 1.5E-31 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMS64_18530 e130be911d2cad66d39657738f85495b 419 Gene3D G3DSA:1.10.150.20 171 228 5.8E-9 T 11-10-2018 AMS64_17705 b2f7addb168fe6da2b609574914d689c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 4.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_17705 b2f7addb168fe6da2b609574914d689c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 4.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_17705 b2f7addb168fe6da2b609574914d689c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 4.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_17705 b2f7addb168fe6da2b609574914d689c 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_17705 b2f7addb168fe6da2b609574914d689c 214 SUPERFAMILY SSF52172 5 131 3.98E-26 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_17705 b2f7addb168fe6da2b609574914d689c 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 1.2E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_17705 b2f7addb168fe6da2b609574914d689c 214 SMART SM00448 5 119 3.6E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_17705 b2f7addb168fe6da2b609574914d689c 214 Gene3D G3DSA:3.40.50.2300 3 132 2.2E-25 T 11-10-2018 AMS64_17705 b2f7addb168fe6da2b609574914d689c 214 Pfam PF00072 Response regulator receiver domain 7 120 3.1E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_17705 b2f7addb168fe6da2b609574914d689c 214 SUPERFAMILY SSF46894 143 211 1.43E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_17705 b2f7addb168fe6da2b609574914d689c 214 Gene3D G3DSA:1.10.10.10 149 214 2.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_17705 b2f7addb168fe6da2b609574914d689c 214 SMART SM00421 149 206 4.2E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_18065 394d13a1197688e0f1d39b7ff7b43953 476 Gene3D G3DSA:3.30.1360.60 396 476 5.3E-29 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AMS64_18065 394d13a1197688e0f1d39b7ff7b43953 476 SUPERFAMILY SSF55604 401 469 1.83E-19 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AMS64_18065 394d13a1197688e0f1d39b7ff7b43953 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 1.9E-72 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMS64_18065 394d13a1197688e0f1d39b7ff7b43953 476 Pfam PF00367 phosphotransferase system, EIIB 404 435 8.4E-14 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMS64_18065 394d13a1197688e0f1d39b7ff7b43953 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 413 430 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMS64_18065 394d13a1197688e0f1d39b7ff7b43953 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.2E-196 T 11-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 AMS64_18065 394d13a1197688e0f1d39b7ff7b43953 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 376 459 8.3E-24 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMS64_07285 ca51dc7df8dd205dedeb83f593e98e4a 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 2.2E-11 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMS64_07285 ca51dc7df8dd205dedeb83f593e98e4a 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 103 2.2E-11 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMS64_07285 ca51dc7df8dd205dedeb83f593e98e4a 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 34 50 2.2E-11 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMS64_07285 ca51dc7df8dd205dedeb83f593e98e4a 105 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 30 104 3.8E-19 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMS64_07285 ca51dc7df8dd205dedeb83f593e98e4a 105 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 105 16.064 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMS64_07285 ca51dc7df8dd205dedeb83f593e98e4a 105 Pfam PF02049 Flagellar hook-basal body complex protein FliE 23 105 1.7E-29 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 Pfam PF01590 GAF domain 18 153 1.7E-15 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 353 364 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 SUPERFAMILY SSF47831 199 311 2.75E-27 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 SUPERFAMILY SSF52009 295 414 9.68E-25 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 296 2.8E-23 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 Gene3D G3DSA:1.10.274.10 191 316 7.9E-58 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 Gene3D G3DSA:3.50.30.10 174 401 7.9E-58 T 11-10-2018 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 SUPERFAMILY SSF55781 2 158 9.6E-30 T 11-10-2018 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 173 727 7.1E-135 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 Gene3D G3DSA:3.20.20.60 402 745 1.2E-101 T 11-10-2018 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 Gene3D G3DSA:3.30.450.40 1 165 6.4E-44 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 SMART SM00065 17 164 5.1E-22 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 423 711 1.5E-96 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 SUPERFAMILY SSF51621 421 719 1.57E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 Pfam PF00391 PEP-utilising enzyme, mobile domain 323 393 6.3E-14 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 618 633 9.4E-23 T 11-10-2018 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 461 480 9.4E-23 T 11-10-2018 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 635 650 9.4E-23 T 11-10-2018 AMS64_20240 fa327ee8b85b5fdb761065d47149a585 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 671 683 9.4E-23 T 11-10-2018 AMS64_12490 c039fcd94869139656ddac569b1d42cb 497 Pfam PF05114 Protein of unknown function (DUF692) 10 266 1.4E-89 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 AMS64_12490 c039fcd94869139656ddac569b1d42cb 497 Gene3D G3DSA:1.10.150.690 276 361 1.3E-11 T 11-10-2018 AMS64_12490 c039fcd94869139656ddac569b1d42cb 497 SUPERFAMILY SSF51658 29 209 5.68E-10 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AMS64_12490 c039fcd94869139656ddac569b1d42cb 497 Gene3D G3DSA:3.20.20.150 6 275 1.3E-79 T 11-10-2018 AMS64_12490 c039fcd94869139656ddac569b1d42cb 497 Pfam PF09836 Putative DNA-binding domain 273 329 3.6E-7 T 11-10-2018 IPR018640 Putative DNA-binding domain, bacteria AMS64_04580 9321d1fd787e9e88b5b784872415635f 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 3.5E-15 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMS64_04580 9321d1fd787e9e88b5b784872415635f 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 97 1.8E-10 T 11-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain AMS64_04580 9321d1fd787e9e88b5b784872415635f 279 Gene3D G3DSA:2.60.120.330 1 279 3.0E-92 T 11-10-2018 IPR027443 Isopenicillin N synthase-like AMS64_04580 9321d1fd787e9e88b5b784872415635f 279 SUPERFAMILY SSF51197 7 276 6.59E-61 T 11-10-2018 AMS64_17300 1365d83a39e8a4c3f672f28fe66dbbb6 293 Gene3D G3DSA:1.10.10.10 1 83 6.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_17300 1365d83a39e8a4c3f672f28fe66dbbb6 293 Gene3D G3DSA:3.40.190.10 87 283 4.5E-35 T 11-10-2018 AMS64_17300 1365d83a39e8a4c3f672f28fe66dbbb6 293 Gene3D G3DSA:3.40.190.10 168 258 4.5E-35 T 11-10-2018 AMS64_17300 1365d83a39e8a4c3f672f28fe66dbbb6 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.5E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_17300 1365d83a39e8a4c3f672f28fe66dbbb6 293 Pfam PF03466 LysR substrate binding domain 92 287 1.3E-17 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_17300 1365d83a39e8a4c3f672f28fe66dbbb6 293 SUPERFAMILY SSF53850 87 286 5.2E-28 T 11-10-2018 AMS64_17300 1365d83a39e8a4c3f672f28fe66dbbb6 293 SUPERFAMILY SSF46785 4 81 3.89E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_12995 c64d5c0714f1e0c93fbe96aafff0194c 347 Gene3D G3DSA:3.10.520.20 22 347 1.2E-104 T 11-10-2018 AMS64_12995 c64d5c0714f1e0c93fbe96aafff0194c 347 Pfam PF02424 ApbE family 38 321 5.3E-74 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AMS64_12995 c64d5c0714f1e0c93fbe96aafff0194c 347 PIRSF PIRSF006268 4 344 1.0E-79 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AMS64_12995 c64d5c0714f1e0c93fbe96aafff0194c 347 SUPERFAMILY SSF143631 31 342 1.28E-86 T 11-10-2018 IPR003374 ApbE-like superfamily AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 SMART SM00382 485 652 2.9E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 SMART SM00382 204 350 1.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 516 534 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.6E-12 T 11-10-2018 IPR004176 Clp, N-terminal AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 SUPERFAMILY SSF52540 435 734 7.31E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 298 2.1E-11 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 Gene3D G3DSA:1.10.8.60 651 750 2.2E-30 T 11-10-2018 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 SUPERFAMILY SSF81923 1 142 1.22E-58 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 560 578 3.1E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 593 607 3.1E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 531 549 3.1E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 489 507 3.1E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 SMART SM01086 651 740 2.1E-35 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 Gene3D G3DSA:3.40.50.300 155 348 4.9E-62 T 11-10-2018 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 300 312 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 Gene3D G3DSA:3.40.50.300 437 650 2.1E-78 T 11-10-2018 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 SUPERFAMILY SSF52540 167 422 1.95E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 Gene3D G3DSA:1.10.8.60 349 436 9.5E-34 T 11-10-2018 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 651 731 1.2E-23 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 Pfam PF07724 AAA domain (Cdc48 subfamily) 484 644 7.9E-49 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 732 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 AMS64_11185 30664ab0ac5ec55c49216d69539e42af 751 Gene3D G3DSA:1.10.1780.10 1 143 6.9E-44 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMS64_21155 a0c4cb9801e6bbc04554051eed6726d8 535 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 330 512 1.9E-47 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMS64_21155 a0c4cb9801e6bbc04554051eed6726d8 535 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 24 277 1.2E-72 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMS64_21155 a0c4cb9801e6bbc04554051eed6726d8 535 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 300 517 19.256 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMS64_21155 a0c4cb9801e6bbc04554051eed6726d8 535 Gene3D G3DSA:3.20.20.70 316 518 8.0E-55 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_21155 a0c4cb9801e6bbc04554051eed6726d8 535 Gene3D G3DSA:3.40.1190.20 7 282 2.1E-87 T 11-10-2018 IPR029056 Ribokinase-like AMS64_21155 a0c4cb9801e6bbc04554051eed6726d8 535 SUPERFAMILY SSF53613 20 280 6.7E-65 T 11-10-2018 IPR029056 Ribokinase-like AMS64_21155 a0c4cb9801e6bbc04554051eed6726d8 535 SUPERFAMILY SSF51391 315 514 9.94E-60 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMS64_21155 a0c4cb9801e6bbc04554051eed6726d8 535 Pfam PF08543 Phosphomethylpyrimidine kinase 30 275 6.5E-71 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AMS64_21155 a0c4cb9801e6bbc04554051eed6726d8 535 Pfam PF02581 Thiamine monophosphate synthase 330 499 2.8E-51 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMS64_21870 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 SUPERFAMILY SSF52172 1 181 2.57E-37 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_21870 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 SMART SM00448 1 112 1.7E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_21870 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_21870 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.2E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_21870 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 Gene3D G3DSA:1.10.10.10 120 218 3.0E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_21870 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 Gene3D G3DSA:3.40.50.2300 1 119 5.3E-40 T 11-10-2018 AMS64_21870 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 SMART SM00862 145 216 7.9E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_18735 a1fde8ef825e3921216694147145cd57 267 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 60 1.7E-15 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMS64_18735 a1fde8ef825e3921216694147145cd57 267 Gene3D G3DSA:1.10.155.10 2 73 1.0E-18 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AMS64_18735 a1fde8ef825e3921216694147145cd57 267 SUPERFAMILY SSF47757 5 74 3.92E-16 T 11-10-2018 AMS64_18735 a1fde8ef825e3921216694147145cd57 267 Pfam PF01739 CheR methyltransferase, SAM binding domain 75 259 1.1E-52 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMS64_18735 a1fde8ef825e3921216694147145cd57 267 PIRSF PIRSF000410 1 267 1.0E-95 T 11-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR AMS64_18735 a1fde8ef825e3921216694147145cd57 267 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 4.6E-41 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_18735 a1fde8ef825e3921216694147145cd57 267 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 4.6E-41 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_18735 a1fde8ef825e3921216694147145cd57 267 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 4.6E-41 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_18735 a1fde8ef825e3921216694147145cd57 267 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 4.6E-41 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_18735 a1fde8ef825e3921216694147145cd57 267 PRINTS PR00996 Glutamate methyltransferase family signature 136 152 4.6E-41 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_18735 a1fde8ef825e3921216694147145cd57 267 PRINTS PR00996 Glutamate methyltransferase family signature 68 80 4.6E-41 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_18735 a1fde8ef825e3921216694147145cd57 267 SMART SM00138 8 267 5.5E-86 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_18735 a1fde8ef825e3921216694147145cd57 267 Gene3D G3DSA:3.40.50.150 74 267 6.9E-59 T 11-10-2018 AMS64_18735 a1fde8ef825e3921216694147145cd57 267 SUPERFAMILY SSF53335 75 266 7.12E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_22445 0805d8e99c4fbfccadeab5d8438835d3 180 SUPERFAMILY SSF51182 46 179 2.65E-28 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_22445 0805d8e99c4fbfccadeab5d8438835d3 180 SMART SM00530 6 61 2.1E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_22445 0805d8e99c4fbfccadeab5d8438835d3 180 Pfam PF01381 Helix-turn-helix 7 58 2.9E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_22445 0805d8e99c4fbfccadeab5d8438835d3 180 SUPERFAMILY SSF47413 1 66 9.65E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_22445 0805d8e99c4fbfccadeab5d8438835d3 180 Gene3D G3DSA:1.10.260.40 1 68 6.4E-15 T 11-10-2018 AMS64_22445 0805d8e99c4fbfccadeab5d8438835d3 180 Pfam PF07883 Cupin domain 107 173 9.5E-19 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AMS64_22445 0805d8e99c4fbfccadeab5d8438835d3 180 Gene3D G3DSA:2.60.120.10 71 174 7.9E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_00580 611fa623677c737627dc677f25c1f9b9 264 Pfam PF00905 Penicillin binding protein transpeptidase domain 41 256 1.4E-45 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMS64_00580 611fa623677c737627dc677f25c1f9b9 264 Gene3D G3DSA:3.40.710.10 24 264 2.0E-79 T 11-10-2018 AMS64_00580 611fa623677c737627dc677f25c1f9b9 264 SUPERFAMILY SSF56601 20 236 1.01E-31 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMS64_00580 611fa623677c737627dc677f25c1f9b9 264 ProSitePatterns PS00337 Beta-lactamase class-D active site. 49 59 - T 11-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 AMS64_15195 0767ea8c8c463756b7d34131fe6a9882 539 SMART SM00283 276 537 2.3E-65 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_15195 0767ea8c8c463756b7d34131fe6a9882 539 SUPERFAMILY SSF58104 229 538 1.03E-73 T 11-10-2018 AMS64_15195 0767ea8c8c463756b7d34131fe6a9882 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 504 4.9E-45 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_15195 0767ea8c8c463756b7d34131fe6a9882 539 Gene3D G3DSA:1.10.287.950 207 539 9.0E-73 T 11-10-2018 AMS64_15195 0767ea8c8c463756b7d34131fe6a9882 539 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 181 3.0E-23 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMS64_15195 0767ea8c8c463756b7d34131fe6a9882 539 SMART SM00304 208 261 3.4E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_15195 0767ea8c8c463756b7d34131fe6a9882 539 SMART SM00304 478 534 6.2 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_16570 8bbddfffdcd8440687f48d370f9ed88c 259 Gene3D G3DSA:3.90.550.10 1 223 2.2E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_16570 8bbddfffdcd8440687f48d370f9ed88c 259 Pfam PF00535 Glycosyl transferase family 2 3 125 3.0E-28 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMS64_16570 8bbddfffdcd8440687f48d370f9ed88c 259 SUPERFAMILY SSF53448 1 220 2.75E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_06980 355817b49b4f982906124654ff925d75 873 Pfam PF01131 DNA topoisomerase 160 568 5.7E-122 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMS64_06980 355817b49b4f982906124654ff925d75 873 Gene3D G3DSA:1.10.290.10 283 407 6.9E-157 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AMS64_06980 355817b49b4f982906124654ff925d75 873 SMART SM00436 136 224 3.1E-49 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AMS64_06980 355817b49b4f982906124654ff925d75 873 SUPERFAMILY SSF57783 813 865 3.4E-20 T 11-10-2018 AMS64_06980 355817b49b4f982906124654ff925d75 873 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 735 54.661 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AMS64_06980 355817b49b4f982906124654ff925d75 873 Gene3D G3DSA:2.20.25.10 811 867 1.2E-25 T 11-10-2018 AMS64_06980 355817b49b4f982906124654ff925d75 873 Gene3D G3DSA:3.30.65.10 747 810 1.4E-30 T 11-10-2018 AMS64_06980 355817b49b4f982906124654ff925d75 873 SUPERFAMILY SSF56712 3 612 1.14E-196 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AMS64_06980 355817b49b4f982906124654ff925d75 873 SUPERFAMILY SSF57783 747 810 1.7E-19 T 11-10-2018 AMS64_06980 355817b49b4f982906124654ff925d75 873 Pfam PF01751 Toprim domain 5 145 2.3E-32 T 11-10-2018 IPR006171 TOPRIM domain AMS64_06980 355817b49b4f982906124654ff925d75 873 Gene3D G3DSA:1.10.460.10 168 574 6.9E-157 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMS64_06980 355817b49b4f982906124654ff925d75 873 SUPERFAMILY SSF57783 702 746 1.07E-6 T 11-10-2018 AMS64_06980 355817b49b4f982906124654ff925d75 873 SMART SM00493 3 135 6.9E-29 T 11-10-2018 IPR006171 TOPRIM domain AMS64_06980 355817b49b4f982906124654ff925d75 873 SMART SM00437 275 530 5.7E-115 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AMS64_06980 355817b49b4f982906124654ff925d75 873 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 312 326 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AMS64_06980 355817b49b4f982906124654ff925d75 873 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 796 1.6E-12 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AMS64_06980 355817b49b4f982906124654ff925d75 873 Pfam PF08272 Topoisomerase I zinc-ribbon-like 827 865 2.5E-21 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AMS64_06980 355817b49b4f982906124654ff925d75 873 Gene3D G3DSA:3.40.50.140 1 166 5.6E-65 T 11-10-2018 AMS64_06980 355817b49b4f982906124654ff925d75 873 Gene3D G3DSA:2.70.20.10 216 476 6.9E-157 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMS64_06980 355817b49b4f982906124654ff925d75 873 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 638 2.3E-244 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AMS64_06980 355817b49b4f982906124654ff925d75 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 7.8E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMS64_06980 355817b49b4f982906124654ff925d75 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 493 507 7.8E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMS64_06980 355817b49b4f982906124654ff925d75 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 393 409 7.8E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMS64_06980 355817b49b4f982906124654ff925d75 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 317 326 7.8E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMS64_06980 355817b49b4f982906124654ff925d75 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 109 122 7.8E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMS64_06980 355817b49b4f982906124654ff925d75 873 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 600 625 1.6E-5 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMS64_06980 355817b49b4f982906124654ff925d75 873 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 712 748 4.8E-10 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMS64_13990 7e7411049f07bcb0891bc9d77cb22fd5 421 Pfam PF13148 Protein of unknown function (DUF3987) 1 324 1.7E-64 T 11-10-2018 IPR025048 Protein of unknown function DUF3987) AMS64_06825 834c73642f0feb38aad16515659437dc 283 Gene3D G3DSA:1.10.8.10 1 84 2.4E-23 T 11-10-2018 AMS64_06825 834c73642f0feb38aad16515659437dc 283 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMS64_06825 834c73642f0feb38aad16515659437dc 283 Pfam PF05175 Methyltransferase small domain 97 196 1.1E-11 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AMS64_06825 834c73642f0feb38aad16515659437dc 283 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 276 9.2E-89 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMS64_06825 834c73642f0feb38aad16515659437dc 283 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 9 279 7.2E-74 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AMS64_06825 834c73642f0feb38aad16515659437dc 283 SUPERFAMILY SSF53335 3 277 1.02E-52 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_06825 834c73642f0feb38aad16515659437dc 283 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 280 43.935 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMS64_06825 834c73642f0feb38aad16515659437dc 283 Gene3D G3DSA:3.40.50.150 85 279 8.5E-55 T 11-10-2018 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 SUPERFAMILY SSF53150 129 281 9.42E-42 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 SUPERFAMILY SSF48334 282 579 1.7E-87 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 22 855 25.237 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 22 861 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 Pfam PF05190 MutS family domain IV 442 532 2.0E-29 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 Gene3D G3DSA:1.10.1420.10 401 517 2.2E-101 T 11-10-2018 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 Gene3D G3DSA:3.40.50.300 584 838 6.8E-101 T 11-10-2018 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 Pfam PF00488 MutS domain V 624 811 4.6E-87 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 SMART SM00534 621 808 1.1E-120 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 Gene3D G3DSA:3.40.1170.10 15 136 1.6E-49 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 Gene3D G3DSA:1.10.1420.10 281 573 2.2E-101 T 11-10-2018 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 Pfam PF01624 MutS domain I 23 134 2.3E-39 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 Pfam PF05188 MutS domain II 143 268 1.2E-29 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 SMART SM00533 298 605 3.4E-102 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 SUPERFAMILY SSF52540 581 812 1.58E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 Pfam PF05192 MutS domain III 284 573 6.1E-40 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 PIRSF PIRSF037677 217 830 2.0E-129 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 PIRSF PIRSF037677 10 196 3.8E-24 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 SUPERFAMILY SSF55271 15 130 4.32E-41 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 Gene3D G3DSA:3.30.420.110 142 276 5.7E-37 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AMS64_03560 ccfad3f1ab19e46e8fade67b688f805a 863 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 702 718 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMS64_15375 dd5454e39ad2ba6300532d7c5ad400c2 263 Gene3D G3DSA:3.40.190.10 105 214 3.2E-16 T 11-10-2018 AMS64_15375 dd5454e39ad2ba6300532d7c5ad400c2 263 SUPERFAMILY SSF53850 24 260 8.45E-26 T 11-10-2018 AMS64_15375 dd5454e39ad2ba6300532d7c5ad400c2 263 SMART SM00062 20 261 0.0027 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_15375 dd5454e39ad2ba6300532d7c5ad400c2 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 260 8.4E-16 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_15375 dd5454e39ad2ba6300532d7c5ad400c2 263 Gene3D G3DSA:3.40.190.10 26 257 3.2E-16 T 11-10-2018 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 150 1.7E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 Gene3D G3DSA:3.30.70.870 306 590 1.8E-131 T 11-10-2018 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 SUPERFAMILY SSF54980 398 512 7.19E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 Gene3D G3DSA:3.30.70.240 389 482 1.8E-131 T 11-10-2018 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 Pfam PF00679 Elongation factor G C-terminus 396 476 8.5E-23 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 1.8E-292 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 SUPERFAMILY SSF54980 302 387 1.15E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 1.6E-57 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 Gene3D G3DSA:3.40.50.300 1 198 3.3E-69 T 11-10-2018 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 Gene3D G3DSA:2.40.30.10 199 299 6.2E-32 T 11-10-2018 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 Gene3D G3DSA:2.40.50.250 483 599 1.8E-131 T 11-10-2018 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 Pfam PF03144 Elongation factor Tu domain 2 219 289 3.4E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 PRINTS PR00315 GTP-binding elongation factor signature 71 81 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 PRINTS PR00315 GTP-binding elongation factor signature 87 98 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 PRINTS PR00315 GTP-binding elongation factor signature 7 20 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 PRINTS PR00315 GTP-binding elongation factor signature 123 132 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 SUPERFAMILY SSF52540 3 207 1.4E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_22370 ad6ce7f87dcf1c0842146e89038fcf07 603 SUPERFAMILY SSF50447 151 299 5.08E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMS64_19845 6f2042b7ea1216022d4bd95940f0afc0 124 Gene3D G3DSA:1.20.120.10 20 124 5.5E-8 T 11-10-2018 AMS64_19845 6f2042b7ea1216022d4bd95940f0afc0 124 SUPERFAMILY SSF47175 25 118 8.54E-15 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AMS64_19845 6f2042b7ea1216022d4bd95940f0afc0 124 Pfam PF07361 Cytochrome b562 25 120 5.9E-21 T 11-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AMS64_00635 01701f8726583b5c9dc66d68676f72c9 392 SUPERFAMILY SSF48452 56 160 3.8E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_00635 01701f8726583b5c9dc66d68676f72c9 392 Gene3D G3DSA:1.25.40.10 32 169 8.5E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_00635 01701f8726583b5c9dc66d68676f72c9 392 Gene3D G3DSA:1.25.40.10 170 391 1.4E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_15340 2ab00091fbb966c4e961799064a9c451 196 SUPERFAMILY SSF52172 1 129 2.85E-26 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_15340 2ab00091fbb966c4e961799064a9c451 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 7.6E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_15340 2ab00091fbb966c4e961799064a9c451 196 Gene3D G3DSA:3.40.50.12740 2 195 4.6E-54 T 11-10-2018 AMS64_15340 2ab00091fbb966c4e961799064a9c451 196 SUPERFAMILY SSF46894 130 193 1.02E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_15340 2ab00091fbb966c4e961799064a9c451 196 SMART SM00421 135 192 4.1E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_15340 2ab00091fbb966c4e961799064a9c451 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 5.0E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_15340 2ab00091fbb966c4e961799064a9c451 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 5.0E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_15340 2ab00091fbb966c4e961799064a9c451 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 5.0E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_15340 2ab00091fbb966c4e961799064a9c451 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_15340 2ab00091fbb966c4e961799064a9c451 196 SMART SM00448 2 112 1.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_15340 2ab00091fbb966c4e961799064a9c451 196 Pfam PF00072 Response regulator receiver domain 4 113 2.0E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_21830 ef782121f972dc3fede57a75e94d6be8 146 PIRSF PIRSF028065 1 141 5.5E-50 T 11-10-2018 IPR016865 Inner membrane protein RclC AMS64_21830 ef782121f972dc3fede57a75e94d6be8 146 Pfam PF04224 Protein of unknown function, DUF417 6 133 8.4E-29 T 11-10-2018 IPR007339 Inner membrane protein RclC-like AMS64_04635 1c87db42ecc79b6ef1ff25d351807ce5 718 Gene3D G3DSA:3.20.20.80 126 572 5.9E-170 T 11-10-2018 AMS64_04635 1c87db42ecc79b6ef1ff25d351807ce5 718 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 96 2.5E-12 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMS64_04635 1c87db42ecc79b6ef1ff25d351807ce5 718 Gene3D G3DSA:2.60.40.10 2 125 2.4E-33 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_04635 1c87db42ecc79b6ef1ff25d351807ce5 718 Gene3D G3DSA:2.60.40.1180 580 676 5.2E-17 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMS64_04635 1c87db42ecc79b6ef1ff25d351807ce5 718 SUPERFAMILY SSF81296 7 133 2.07E-36 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_04635 1c87db42ecc79b6ef1ff25d351807ce5 718 Pfam PF00128 Alpha amylase, catalytic domain 177 518 6.2E-11 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_04635 1c87db42ecc79b6ef1ff25d351807ce5 718 SUPERFAMILY SSF51445 122 565 6.21E-124 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_04635 1c87db42ecc79b6ef1ff25d351807ce5 718 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 8 656 1.5E-254 T 11-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AMS64_04635 1c87db42ecc79b6ef1ff25d351807ce5 718 SUPERFAMILY SSF51011 583 676 1.44E-17 T 11-10-2018 AMS64_04635 1c87db42ecc79b6ef1ff25d351807ce5 718 SMART SM00642 147 559 1.4E-8 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_22460 aae649aec9059983b0bf6b33f57faaff 539 SMART SM00304 205 257 4.3E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_22460 aae649aec9059983b0bf6b33f57faaff 539 SMART SM00283 272 533 1.3E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_22460 aae649aec9059983b0bf6b33f57faaff 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 500 5.3E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_22460 aae649aec9059983b0bf6b33f57faaff 539 SUPERFAMILY SSF58104 227 534 2.62E-57 T 11-10-2018 AMS64_22460 aae649aec9059983b0bf6b33f57faaff 539 Gene3D G3DSA:1.10.287.950 207 535 9.6E-61 T 11-10-2018 AMS64_22460 aae649aec9059983b0bf6b33f57faaff 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 447 476 2.8E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_22460 aae649aec9059983b0bf6b33f57faaff 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 293 322 2.8E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_22460 aae649aec9059983b0bf6b33f57faaff 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 428 2.8E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_22460 aae649aec9059983b0bf6b33f57faaff 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 397 2.8E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_22460 aae649aec9059983b0bf6b33f57faaff 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 9 34 2.8E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_04375 fe2e79ab273fbd8fe31701d62203d19e 226 Gene3D G3DSA:3.40.50.720 2 225 1.1E-58 T 11-10-2018 AMS64_04375 fe2e79ab273fbd8fe31701d62203d19e 226 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_04375 fe2e79ab273fbd8fe31701d62203d19e 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04375 fe2e79ab273fbd8fe31701d62203d19e 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04375 fe2e79ab273fbd8fe31701d62203d19e 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 2.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04375 fe2e79ab273fbd8fe31701d62203d19e 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04375 fe2e79ab273fbd8fe31701d62203d19e 226 Pfam PF00106 short chain dehydrogenase 3 187 1.7E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04375 fe2e79ab273fbd8fe31701d62203d19e 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.3E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04375 fe2e79ab273fbd8fe31701d62203d19e 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 2.3E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04375 fe2e79ab273fbd8fe31701d62203d19e 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 2.3E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04375 fe2e79ab273fbd8fe31701d62203d19e 226 SUPERFAMILY SSF51735 3 213 5.24E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_04375 fe2e79ab273fbd8fe31701d62203d19e 226 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 182 0.0013 T 11-10-2018 AMS64_02935 0b2e4320e04f12b52b08d2d148af82b9 244 Pfam PF02167 Cytochrome C1 family 33 243 1.3E-18 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMS64_02935 0b2e4320e04f12b52b08d2d148af82b9 244 PRINTS PR00603 Cytochrome C1 signature 209 224 8.9E-6 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMS64_02935 0b2e4320e04f12b52b08d2d148af82b9 244 PRINTS PR00603 Cytochrome C1 signature 190 209 8.9E-6 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMS64_02935 0b2e4320e04f12b52b08d2d148af82b9 244 PRINTS PR00603 Cytochrome C1 signature 42 61 8.9E-6 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMS64_02935 0b2e4320e04f12b52b08d2d148af82b9 244 SUPERFAMILY SSF46626 16 208 1.32E-52 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_02935 0b2e4320e04f12b52b08d2d148af82b9 244 Gene3D G3DSA:1.10.760.10 24 209 2.0E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_13460 73a8e1dd3f1b11b0aea77fd7d0fc2600 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 2.2E-23 T 11-10-2018 AMS64_13460 73a8e1dd3f1b11b0aea77fd7d0fc2600 81 SUPERFAMILY SSF54285 1 81 1.38E-24 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMS64_13460 73a8e1dd3f1b11b0aea77fd7d0fc2600 81 Gene3D G3DSA:3.10.20.30 1 81 6.5E-28 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_13460 73a8e1dd3f1b11b0aea77fd7d0fc2600 81 Pfam PF02597 ThiS family 4 81 3.7E-22 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 Pfam PF08335 GlnD PII-uridylyltransferase 178 316 3.9E-36 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 Gene3D G3DSA:1.10.3210.10 440 587 1.6E-6 T 11-10-2018 AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 33 874 1.1E-303 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 SUPERFAMILY SSF81301 39 167 4.46E-22 T 11-10-2018 AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 PIRSF PIRSF006288 11 880 0.0 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 SUPERFAMILY SSF81593 199 313 5.73E-10 T 11-10-2018 AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 Pfam PF01966 HD domain 486 585 1.0E-11 T 11-10-2018 IPR006674 HD domain AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 SUPERFAMILY SSF109604 419 614 1.85E-13 T 11-10-2018 AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 SUPERFAMILY SSF55021 690 764 7.25E-8 T 11-10-2018 AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 Pfam PF01909 Nucleotidyltransferase domain 57 119 3.4E-8 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 SUPERFAMILY SSF55021 802 867 5.73E-8 T 11-10-2018 AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 SMART SM00471 448 595 1.8E-6 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_18050 a4cc6ce4248c2d97644149bfd925e50d 882 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 882 338.753 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMS64_11900 f84901c246a24b7ff4832eb05f9d3661 251 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 9.9E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMS64_11900 f84901c246a24b7ff4832eb05f9d3661 251 SUPERFAMILY SSF56300 1 219 1.04E-32 T 11-10-2018 AMS64_11900 f84901c246a24b7ff4832eb05f9d3661 251 Gene3D G3DSA:3.60.21.10 1 237 2.2E-16 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMS64_11900 f84901c246a24b7ff4832eb05f9d3661 251 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 227 1.0E-100 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AMS64_11900 f84901c246a24b7ff4832eb05f9d3661 251 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 125.976 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AMS64_13225 ac0795af4a8a308dfcbb7f8f4c511631 420 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 417 5.2E-25 T 11-10-2018 IPR010352 Protein of unknown function DUF945 AMS64_16705 7f5d433b5dc7830fadf1694cb702784c 361 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 343 2.0E-154 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AMS64_16705 7f5d433b5dc7830fadf1694cb702784c 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 330 2.4E-95 T 11-10-2018 IPR016040 NAD(P)-binding domain AMS64_16705 7f5d433b5dc7830fadf1694cb702784c 361 Gene3D G3DSA:3.90.25.10 209 338 1.2E-134 T 11-10-2018 AMS64_16705 7f5d433b5dc7830fadf1694cb702784c 361 Gene3D G3DSA:3.40.50.720 2 329 1.2E-134 T 11-10-2018 AMS64_16705 7f5d433b5dc7830fadf1694cb702784c 361 SUPERFAMILY SSF51735 1 356 2.09E-93 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_12690 c1ff5d0ee45bc36660da8d84be98515e 410 SUPERFAMILY SSF51735 109 296 2.98E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_12690 c1ff5d0ee45bc36660da8d84be98515e 410 SUPERFAMILY SSF55021 338 409 5.66E-18 T 11-10-2018 AMS64_12690 c1ff5d0ee45bc36660da8d84be98515e 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 327 2.9E-37 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMS64_12690 c1ff5d0ee45bc36660da8d84be98515e 410 SUPERFAMILY SSF52283 8 139 9.14E-50 T 11-10-2018 AMS64_12690 c1ff5d0ee45bc36660da8d84be98515e 410 Gene3D G3DSA:3.40.50.720 15 313 1.9E-109 T 11-10-2018 AMS64_12690 c1ff5d0ee45bc36660da8d84be98515e 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 295 8.6E-54 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMS64_12690 c1ff5d0ee45bc36660da8d84be98515e 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 230 246 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMS64_12690 c1ff5d0ee45bc36660da8d84be98515e 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 155 182 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMS64_12690 c1ff5d0ee45bc36660da8d84be98515e 410 Gene3D G3DSA:3.30.70.260 329 409 1.4E-33 T 11-10-2018 AMS64_12690 c1ff5d0ee45bc36660da8d84be98515e 410 Gene3D G3DSA:3.40.50.720 110 298 1.9E-109 T 11-10-2018 AMS64_12690 c1ff5d0ee45bc36660da8d84be98515e 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 201 223 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMS64_05640 24d190d243a308e14afd92d69b1dfa1d 363 Pfam PF00294 pfkB family carbohydrate kinase 59 346 5.1E-47 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AMS64_05640 24d190d243a308e14afd92d69b1dfa1d 363 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMS64_05640 24d190d243a308e14afd92d69b1dfa1d 363 SUPERFAMILY SSF46785 1 55 2.95E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_05640 24d190d243a308e14afd92d69b1dfa1d 363 Gene3D G3DSA:3.40.1190.20 55 362 1.0E-76 T 11-10-2018 IPR029056 Ribokinase-like AMS64_05640 24d190d243a308e14afd92d69b1dfa1d 363 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 48 1.4E-11 T 11-10-2018 AMS64_05640 24d190d243a308e14afd92d69b1dfa1d 363 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 302 315 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMS64_05640 24d190d243a308e14afd92d69b1dfa1d 363 Gene3D G3DSA:1.10.10.10 2 54 4.2E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_05640 24d190d243a308e14afd92d69b1dfa1d 363 SUPERFAMILY SSF53613 60 358 2.96E-59 T 11-10-2018 IPR029056 Ribokinase-like AMS64_21900 5a5337726a5df091c66eef032243ef86 426 Gene3D G3DSA:3.40.50.300 133 286 1.6E-42 T 11-10-2018 AMS64_21900 5a5337726a5df091c66eef032243ef86 426 Pfam PF00072 Response regulator receiver domain 4 113 4.4E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_21900 5a5337726a5df091c66eef032243ef86 426 SMART SM00382 152 278 3.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_21900 5a5337726a5df091c66eef032243ef86 426 Gene3D G3DSA:3.40.50.2300 1 132 3.2E-40 T 11-10-2018 AMS64_21900 5a5337726a5df091c66eef032243ef86 426 SUPERFAMILY SSF52540 134 360 4.29E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_21900 5a5337726a5df091c66eef032243ef86 426 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 329 338 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMS64_21900 5a5337726a5df091c66eef032243ef86 426 SUPERFAMILY SSF46689 369 417 2.15E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_21900 5a5337726a5df091c66eef032243ef86 426 SMART SM00448 2 113 6.1E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_21900 5a5337726a5df091c66eef032243ef86 426 Pfam PF00158 Sigma-54 interaction domain 133 281 6.0E-37 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_21900 5a5337726a5df091c66eef032243ef86 426 Gene3D G3DSA:1.10.8.60 287 363 3.4E-16 T 11-10-2018 AMS64_21900 5a5337726a5df091c66eef032243ef86 426 Gene3D G3DSA:1.10.10.60 368 420 3.1E-12 T 11-10-2018 AMS64_21900 5a5337726a5df091c66eef032243ef86 426 SUPERFAMILY SSF52172 2 176 3.42E-43 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_18565 5307f850176c70f868d422c52e23025f 455 SMART SM00671 115 149 7.6 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 SMART SM00671 38 69 2.3 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 SMART SM00671 344 379 9.2E-6 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 SMART SM00671 183 218 1.8E-6 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 SMART SM00671 247 282 0.02 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 SMART SM00671 380 415 0.0037 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 SMART SM00671 312 343 14.0 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 SMART SM00671 79 114 3.4E-6 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 SMART SM00671 150 182 0.012 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 Gene3D G3DSA:1.25.40.10 226 296 8.9E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_18565 5307f850176c70f868d422c52e23025f 455 SUPERFAMILY SSF81901 232 418 2.79E-31 T 11-10-2018 AMS64_18565 5307f850176c70f868d422c52e23025f 455 Pfam PF08238 Sel1 repeat 80 114 8.2E-7 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 Pfam PF08238 Sel1 repeat 184 216 1.7E-6 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 Pfam PF08238 Sel1 repeat 247 282 0.003 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 Pfam PF08238 Sel1 repeat 345 379 0.0053 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 Pfam PF08238 Sel1 repeat 150 182 0.013 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 Pfam PF08238 Sel1 repeat 41 67 0.54 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 Pfam PF08238 Sel1 repeat 382 414 4.5E-7 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 Pfam PF08238 Sel1 repeat 117 149 0.0039 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_18565 5307f850176c70f868d422c52e23025f 455 SUPERFAMILY SSF81901 30 225 2.01E-32 T 11-10-2018 AMS64_18565 5307f850176c70f868d422c52e23025f 455 Gene3D G3DSA:1.25.40.10 24 130 1.1E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_18565 5307f850176c70f868d422c52e23025f 455 Gene3D G3DSA:1.25.40.10 131 225 7.1E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_18565 5307f850176c70f868d422c52e23025f 455 Gene3D G3DSA:1.25.40.10 297 453 5.7E-34 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_01510 302718ea2b8852ba6bf4da79f9ad6bdf 474 Pfam PF01769 Divalent cation transporter 345 466 1.5E-23 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMS64_01510 302718ea2b8852ba6bf4da79f9ad6bdf 474 SUPERFAMILY SSF158791 39 157 1.96E-22 T 11-10-2018 AMS64_01510 302718ea2b8852ba6bf4da79f9ad6bdf 474 SUPERFAMILY SSF54631 160 300 4.42E-25 T 11-10-2018 AMS64_01510 302718ea2b8852ba6bf4da79f9ad6bdf 474 Pfam PF00571 CBS domain 225 278 2.4E-6 T 11-10-2018 IPR000644 CBS domain AMS64_01510 302718ea2b8852ba6bf4da79f9ad6bdf 474 SMART SM00924 58 161 4.2E-30 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AMS64_01510 302718ea2b8852ba6bf4da79f9ad6bdf 474 Gene3D G3DSA:3.10.580.10 158 284 2.9E-35 T 11-10-2018 AMS64_01510 302718ea2b8852ba6bf4da79f9ad6bdf 474 TIGRFAM TIGR00400 mgtE: magnesium transporter 47 473 5.9E-73 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AMS64_01510 302718ea2b8852ba6bf4da79f9ad6bdf 474 Gene3D G3DSA:1.10.357.20 299 473 5.2E-47 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AMS64_01510 302718ea2b8852ba6bf4da79f9ad6bdf 474 Gene3D G3DSA:1.25.60.10 30 156 9.0E-15 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily AMS64_01510 302718ea2b8852ba6bf4da79f9ad6bdf 474 SUPERFAMILY SSF161093 302 473 5.49E-47 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AMS64_01510 302718ea2b8852ba6bf4da79f9ad6bdf 474 Pfam PF03448 MgtE intracellular N domain 59 156 4.8E-21 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AMS64_06475 5807249c446fbfdb1ab411e1eb529050 374 Pfam PF01546 Peptidase family M20/M25/M40 73 370 5.5E-24 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMS64_06475 5807249c446fbfdb1ab411e1eb529050 374 Pfam PF07687 Peptidase dimerisation domain 175 272 1.2E-21 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AMS64_06475 5807249c446fbfdb1ab411e1eb529050 374 SUPERFAMILY SSF53187 3 373 9.57E-42 T 11-10-2018 AMS64_06475 5807249c446fbfdb1ab411e1eb529050 374 Gene3D G3DSA:3.30.70.360 177 286 3.4E-111 T 11-10-2018 AMS64_06475 5807249c446fbfdb1ab411e1eb529050 374 PIRSF PIRSF037238 1 373 6.5E-145 T 11-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase AMS64_06475 5807249c446fbfdb1ab411e1eb529050 374 SUPERFAMILY SSF55031 177 283 3.89E-24 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMS64_06475 5807249c446fbfdb1ab411e1eb529050 374 Gene3D G3DSA:3.40.630.10 12 361 3.4E-111 T 11-10-2018 AMS64_18635 8a5a2af5d0f382fd95826f7d7db34cc7 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 2.1E-39 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AMS64_18635 8a5a2af5d0f382fd95826f7d7db34cc7 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 397 418 2.1E-39 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AMS64_18635 8a5a2af5d0f382fd95826f7d7db34cc7 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 287 303 2.1E-39 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AMS64_18635 8a5a2af5d0f382fd95826f7d7db34cc7 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 240 259 2.1E-39 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AMS64_18635 8a5a2af5d0f382fd95826f7d7db34cc7 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 144 164 2.1E-39 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AMS64_18635 8a5a2af5d0f382fd95826f7d7db34cc7 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 260 279 2.1E-39 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AMS64_18635 8a5a2af5d0f382fd95826f7d7db34cc7 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 442 460 2.1E-39 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AMS64_18635 8a5a2af5d0f382fd95826f7d7db34cc7 492 PIRSF PIRSF006615 1 492 1.7E-190 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AMS64_18635 8a5a2af5d0f382fd95826f7d7db34cc7 492 Gene3D G3DSA:1.10.1370.30 1 492 3.6E-195 T 11-10-2018 AMS64_18635 8a5a2af5d0f382fd95826f7d7db34cc7 492 SUPERFAMILY SSF55486 3 491 5.01E-118 T 11-10-2018 AMS64_18635 8a5a2af5d0f382fd95826f7d7db34cc7 492 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 11 490 5.1E-84 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AMS64_01680 88ee071a126be676a2ee662cabb18d73 128 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 88 112 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMS64_01680 88ee071a126be676a2ee662cabb18d73 128 SUPERFAMILY SSF109635 3 84 1.31E-15 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily AMS64_01680 88ee071a126be676a2ee662cabb18d73 128 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 83 117 2.0E-12 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMS64_01680 88ee071a126be676a2ee662cabb18d73 128 SUPERFAMILY SSF57716 85 122 5.23E-10 T 11-10-2018 AMS64_01680 88ee071a126be676a2ee662cabb18d73 128 Gene3D G3DSA:1.20.120.910 2 125 8.0E-30 T 11-10-2018 AMS64_17185 f3b2069b69bedf4b31247b8b477fdf53 280 Gene3D G3DSA:3.40.50.300 5 203 1.6E-26 T 11-10-2018 AMS64_17185 f3b2069b69bedf4b31247b8b477fdf53 280 SMART SM00382 25 183 1.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_17185 f3b2069b69bedf4b31247b8b477fdf53 280 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 175 1.7E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_17185 f3b2069b69bedf4b31247b8b477fdf53 280 SUPERFAMILY SSF52540 14 237 1.12E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19645 f1c96bfd8ad5904963600a33e1cf301c 293 SUPERFAMILY SSF103481 180 280 5.49E-11 T 11-10-2018 AMS64_19645 f1c96bfd8ad5904963600a33e1cf301c 293 SUPERFAMILY SSF103481 39 138 1.7E-10 T 11-10-2018 AMS64_19645 f1c96bfd8ad5904963600a33e1cf301c 293 Pfam PF00892 EamA-like transporter family 146 277 8.0E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_19645 f1c96bfd8ad5904963600a33e1cf301c 293 Pfam PF00892 EamA-like transporter family 5 135 1.5E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_07580 f5c8ec3903aba83a0608737a505ffdc9 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMS64_07580 f5c8ec3903aba83a0608737a505ffdc9 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 1.9E-17 T 11-10-2018 IPR000362 Fumarate lyase family AMS64_07580 f5c8ec3903aba83a0608737a505ffdc9 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.9E-17 T 11-10-2018 IPR000362 Fumarate lyase family AMS64_07580 f5c8ec3903aba83a0608737a505ffdc9 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 1.9E-17 T 11-10-2018 IPR000362 Fumarate lyase family AMS64_07580 f5c8ec3903aba83a0608737a505ffdc9 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.9E-17 T 11-10-2018 IPR000362 Fumarate lyase family AMS64_07580 f5c8ec3903aba83a0608737a505ffdc9 456 SUPERFAMILY SSF48557 4 446 2.98E-105 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMS64_07580 f5c8ec3903aba83a0608737a505ffdc9 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 454 5.2E-147 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMS64_07580 f5c8ec3903aba83a0608737a505ffdc9 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 3.1E-52 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AMS64_07580 f5c8ec3903aba83a0608737a505ffdc9 456 Gene3D G3DSA:1.20.200.10 118 446 1.9E-158 T 11-10-2018 AMS64_07580 f5c8ec3903aba83a0608737a505ffdc9 456 Gene3D G3DSA:1.10.40.30 382 445 1.9E-158 T 11-10-2018 AMS64_07580 f5c8ec3903aba83a0608737a505ffdc9 456 Gene3D G3DSA:1.10.275.10 1 117 5.4E-50 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AMS64_07580 f5c8ec3903aba83a0608737a505ffdc9 456 Pfam PF00206 Lyase 14 312 3.9E-73 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AMS64_19580 4a4a0ea850d3d525f72873b8a3ff3b19 106 Pfam PF12836 Helix-hairpin-helix motif 42 103 3.8E-24 T 11-10-2018 AMS64_19580 4a4a0ea850d3d525f72873b8a3ff3b19 106 SUPERFAMILY SSF47781 31 105 1.45E-31 T 11-10-2018 IPR010994 RuvA domain 2-like AMS64_19580 4a4a0ea850d3d525f72873b8a3ff3b19 106 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 41 105 1.5E-25 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AMS64_19580 4a4a0ea850d3d525f72873b8a3ff3b19 106 Gene3D G3DSA:1.10.150.320 27 103 4.3E-24 T 11-10-2018 AMS64_19580 4a4a0ea850d3d525f72873b8a3ff3b19 106 SMART SM00278 53 72 0.0094 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMS64_19580 4a4a0ea850d3d525f72873b8a3ff3b19 106 SMART SM00278 83 102 36.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 SUPERFAMILY SSF51735 376 597 7.55E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 Pfam PF07993 Male sterility protein 5 236 2.0E-44 T 11-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 Pfam PF00106 short chain dehydrogenase 380 570 9.8E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 455 466 4.1E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 504 520 4.1E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 530 549 4.1E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 381 398 4.1E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 SUPERFAMILY SSF51735 1 307 8.71E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 517 545 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 Gene3D G3DSA:3.40.50.720 367 630 2.1E-62 T 11-10-2018 AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 380 566 2.0E-4 T 11-10-2018 AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 530 549 2.7E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 510 518 2.7E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 455 466 2.7E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09665 d00b83fed878810e80b7fb77e8214ae6 657 Gene3D G3DSA:3.40.50.720 1 364 1.5E-59 T 11-10-2018 AMS64_14570 f044f47bf5af91677f798e23a677f1fd 512 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 25 143 2.2E-8 T 11-10-2018 IPR000014 PAS domain AMS64_14570 f044f47bf5af91677f798e23a677f1fd 512 Gene3D G3DSA:3.30.450.20 15 141 9.9E-23 T 11-10-2018 AMS64_14570 f044f47bf5af91677f798e23a677f1fd 512 SUPERFAMILY SSF55785 28 137 8.9E-16 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_14570 f044f47bf5af91677f798e23a677f1fd 512 Gene3D G3DSA:1.10.3210.10 315 506 8.5E-63 T 11-10-2018 AMS64_14570 f044f47bf5af91677f798e23a677f1fd 512 Pfam PF08448 PAS fold 30 137 5.6E-18 T 11-10-2018 IPR013656 PAS fold-4 AMS64_14570 f044f47bf5af91677f798e23a677f1fd 512 SMART SM00471 336 471 4.0E-10 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_14570 f044f47bf5af91677f798e23a677f1fd 512 SUPERFAMILY SSF55781 146 297 2.4E-9 T 11-10-2018 AMS64_14570 f044f47bf5af91677f798e23a677f1fd 512 SUPERFAMILY SSF109604 332 502 1.28E-34 T 11-10-2018 AMS64_14570 f044f47bf5af91677f798e23a677f1fd 512 Pfam PF13487 HD domain 392 453 1.8E-18 T 11-10-2018 AMS64_14570 f044f47bf5af91677f798e23a677f1fd 512 Gene3D G3DSA:3.30.450.40 142 310 2.0E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_03120 6b939f8b1a4c16ec3762061b016c56f2 368 Pfam PF02119 Flagellar P-ring protein 28 367 6.4E-133 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_03120 6b939f8b1a4c16ec3762061b016c56f2 368 PRINTS PR01010 Flagellar P-ring protein signature 86 105 9.8E-75 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_03120 6b939f8b1a4c16ec3762061b016c56f2 368 PRINTS PR01010 Flagellar P-ring protein signature 166 184 9.8E-75 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_03120 6b939f8b1a4c16ec3762061b016c56f2 368 PRINTS PR01010 Flagellar P-ring protein signature 26 41 9.8E-75 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_03120 6b939f8b1a4c16ec3762061b016c56f2 368 PRINTS PR01010 Flagellar P-ring protein signature 192 210 9.8E-75 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_03120 6b939f8b1a4c16ec3762061b016c56f2 368 PRINTS PR01010 Flagellar P-ring protein signature 108 125 9.8E-75 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_03120 6b939f8b1a4c16ec3762061b016c56f2 368 PRINTS PR01010 Flagellar P-ring protein signature 41 56 9.8E-75 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_03120 6b939f8b1a4c16ec3762061b016c56f2 368 PRINTS PR01010 Flagellar P-ring protein signature 255 267 9.8E-75 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_03120 6b939f8b1a4c16ec3762061b016c56f2 368 PRINTS PR01010 Flagellar P-ring protein signature 60 75 9.8E-75 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_03120 6b939f8b1a4c16ec3762061b016c56f2 368 PRINTS PR01010 Flagellar P-ring protein signature 125 143 9.8E-75 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_03120 6b939f8b1a4c16ec3762061b016c56f2 368 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 368 35.655 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 SUPERFAMILY SSF50249 8 80 3.03E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 Gene3D G3DSA:2.40.50.140 559 646 5.2E-27 T 11-10-2018 AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 SUPERFAMILY SSF50249 84 170 5.14E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 SMART SM00955 191 517 1.7E-118 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 644 1.5E-271 T 11-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 Gene3D G3DSA:2.40.50.640 83 155 7.6E-25 T 11-10-2018 AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 Gene3D G3DSA:2.40.50.140 1 81 1.8E-26 T 11-10-2018 AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 1.1E-186 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 Pfam PF00575 S1 RNA binding domain 561 640 3.6E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 SUPERFAMILY SSF50249 561 643 9.0E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 SMART SM00357 23 79 6.2E-9 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 Pfam PF08206 Ribonuclease B OB domain 24 76 4.1E-16 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 645 42.105 T 11-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 Pfam PF00773 RNB domain 191 516 2.7E-81 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site AMS64_04425 615ec0d1e76c6df2d95c2f346c89c2e3 678 SUPERFAMILY SSF50249 181 556 4.28E-109 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_08940 9dae7d1fb5304423e9809740c8cb6ece 399 SUPERFAMILY SSF53686 33 348 1.28E-59 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMS64_08940 9dae7d1fb5304423e9809740c8cb6ece 399 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 392 5.1E-188 T 11-10-2018 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 AMS64_08940 9dae7d1fb5304423e9809740c8cb6ece 399 Gene3D G3DSA:3.40.50.1100 76 194 3.0E-152 T 11-10-2018 AMS64_08940 9dae7d1fb5304423e9809740c8cb6ece 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 41 348 4.3E-50 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMS64_08940 9dae7d1fb5304423e9809740c8cb6ece 399 Gene3D G3DSA:3.40.50.1100 33 390 3.0E-152 T 11-10-2018 AMS64_08940 9dae7d1fb5304423e9809740c8cb6ece 399 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 6 393 4.2E-187 T 11-10-2018 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 435 560 0.021 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 Gene3D G3DSA:3.90.480.10 84 170 4.1E-23 T 11-10-2018 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 Gene3D G3DSA:3.90.480.10 340 425 9.1E-31 T 11-10-2018 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 SUPERFAMILY SSF56014 432 562 6.67E-34 T 11-10-2018 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 22 561 3.1E-279 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 480 496 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 SUPERFAMILY SSF56014 152 346 9.29E-57 T 11-10-2018 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 176 332 1.1E-44 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 Gene3D G3DSA:3.30.413.10 205 339 7.9E-44 T 11-10-2018 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 355 416 1.9E-12 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 82 141 2.0E-14 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 SUPERFAMILY SSF55124 348 424 2.13E-20 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 PRINTS PR00397 Sirohaem Fe-binding site signature 480 498 1.2E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 PRINTS PR00397 Sirohaem Fe-binding site signature 432 450 1.2E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 Gene3D G3DSA:3.30.413.10 428 570 1.1E-35 T 11-10-2018 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 13 573 58.901 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_06075 6da63caaf6ea5d1ef8f099b0b468fc71 574 SUPERFAMILY SSF55124 18 148 1.96E-26 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 SUPERFAMILY SSF52540 140 384 1.08E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 SUPERFAMILY SSF52172 4 186 1.71E-43 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 435 452 5.9E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 452 472 5.9E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 Pfam PF00158 Sigma-54 interaction domain 141 308 2.4E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 SMART SM00448 3 114 1.8E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 Gene3D G3DSA:3.40.50.300 125 312 1.4E-66 T 11-10-2018 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 5 469 2.0E-230 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 SUPERFAMILY SSF46689 394 471 4.48E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 SMART SM00382 161 308 7.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 Pfam PF02954 Bacterial regulatory protein, Fis family 429 469 8.9E-17 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 Gene3D G3DSA:1.10.10.60 384 472 1.8E-27 T 11-10-2018 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 Gene3D G3DSA:1.10.8.60 313 383 1.0E-19 T 11-10-2018 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 Gene3D G3DSA:3.40.50.2300 2 123 5.0E-40 T 11-10-2018 AMS64_22390 b1d4b81df3daa1ad0fc702fffd853f70 472 Pfam PF00072 Response regulator receiver domain 5 114 3.0E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_09515 036ac7f68f809a060d59de48bfce7635 671 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 198 550 6.7E-111 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AMS64_09515 036ac7f68f809a060d59de48bfce7635 671 SUPERFAMILY SSF52096 172 534 4.47E-66 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_09515 036ac7f68f809a060d59de48bfce7635 671 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 242 322 1.3E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMS64_09515 036ac7f68f809a060d59de48bfce7635 671 SMART SM00245 329 530 1.2E-59 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AMS64_09515 036ac7f68f809a060d59de48bfce7635 671 SMART SM00228 248 325 9.8E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMS64_09515 036ac7f68f809a060d59de48bfce7635 671 SUPERFAMILY SSF50156 245 328 2.31E-12 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMS64_09515 036ac7f68f809a060d59de48bfce7635 671 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 535 665 1.1E-39 T 11-10-2018 IPR020992 Tail specific protease, C-terminal AMS64_09515 036ac7f68f809a060d59de48bfce7635 671 Pfam PF03572 Peptidase family S41 359 528 4.4E-49 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AMS64_09515 036ac7f68f809a060d59de48bfce7635 671 Gene3D G3DSA:2.30.42.10 238 324 4.0E-14 T 11-10-2018 AMS64_09515 036ac7f68f809a060d59de48bfce7635 671 Gene3D G3DSA:3.90.226.10 327 547 7.6E-54 T 11-10-2018 AMS64_18300 8808b4a592ebe84901e6a0ccd6be5fb3 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 131 399 6.5E-81 T 11-10-2018 AMS64_18300 8808b4a592ebe84901e6a0ccd6be5fb3 418 SUPERFAMILY SSF53335 18 357 8.28E-86 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_18300 8808b4a592ebe84901e6a0ccd6be5fb3 418 PIRSF PIRSF003085 15 412 2.2E-117 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AMS64_18300 8808b4a592ebe84901e6a0ccd6be5fb3 418 Gene3D G3DSA:3.40.50.150 135 408 6.6E-99 T 11-10-2018 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 Pfam PF10414 Sirohaem synthase dimerisation region 152 207 6.6E-17 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 SUPERFAMILY SSF53790 214 457 2.36E-80 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 204 7.3E-71 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 Gene3D G3DSA:1.10.8.210 149 212 9.7E-19 T 11-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 Hamap MF_01646 Siroheme synthase [cysG]. 1 458 52.422 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 Gene3D G3DSA:3.30.950.10 332 465 3.0E-47 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 Gene3D G3DSA:3.40.50.720 1 112 5.3E-35 T 11-10-2018 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 PIRSF PIRSF036426 1 465 9.8E-201 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 Pfam PF13241 Putative NAD(P)-binding 6 115 1.8E-27 T 11-10-2018 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 SUPERFAMILY SSF51735 1 112 9.19E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 4.2E-9 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 1.7E-89 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 Gene3D G3DSA:3.30.160.110 113 148 2.7E-20 T 11-10-2018 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 SUPERFAMILY SSF75615 114 205 4.05E-27 T 11-10-2018 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 Gene3D G3DSA:3.40.1010.10 215 331 4.8E-43 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMS64_01515 d0ed13006f5597e69355339e524db7ae 466 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 2.7E-49 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 377 48.482 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 3.1E-11 T 11-10-2018 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 348 361 3.1E-11 T 11-10-2018 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 3.1E-11 T 11-10-2018 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 374 1.7E-149 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 Gene3D G3DSA:3.40.50.880 152 378 1.9E-73 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 2.7E-40 T 11-10-2018 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 2.7E-40 T 11-10-2018 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 2.7E-40 T 11-10-2018 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 2.7E-40 T 11-10-2018 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 2.7E-40 T 11-10-2018 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 Gene3D G3DSA:3.50.30.20 2 151 1.0E-61 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 Pfam PF00117 Glutamine amidotransferase class-I 196 371 1.0E-46 T 11-10-2018 IPR017926 Glutamine amidotransferase AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 SUPERFAMILY SSF52021 4 142 5.75E-58 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 SMART SM01097 3 133 8.0E-93 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.2E-53 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 PRINTS PR00097 Anthranilate synthase component II signature 235 244 1.1E-5 T 11-10-2018 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 PRINTS PR00097 Anthranilate synthase component II signature 348 361 1.1E-5 T 11-10-2018 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 PRINTS PR00097 Anthranilate synthase component II signature 263 274 1.1E-5 T 11-10-2018 AMS64_12660 c68bca38fc8d727fc5a6f9df601bb14c 378 SUPERFAMILY SSF52317 153 377 1.83E-60 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_01795 b7271202e174b3829e5e531e51e90594 477 Pfam PF11066 Protein of unknown function (DUF2867) 330 459 3.8E-16 T 11-10-2018 IPR021295 Protein of unknown function DUF2867 AMS64_01795 b7271202e174b3829e5e531e51e90594 477 SUPERFAMILY SSF55961 330 469 9.38E-13 T 11-10-2018 AMS64_01795 b7271202e174b3829e5e531e51e90594 477 Pfam PF13460 NAD(P)H-binding 8 114 3.9E-13 T 11-10-2018 IPR016040 NAD(P)-binding domain AMS64_01795 b7271202e174b3829e5e531e51e90594 477 Gene3D G3DSA:3.40.50.720 5 292 5.1E-39 T 11-10-2018 AMS64_01795 b7271202e174b3829e5e531e51e90594 477 SUPERFAMILY SSF51735 1 287 2.22E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_05940 46f1b76d3a2c96bc60adb0123f138f06 638 Gene3D G3DSA:3.30.20.10 243 318 3.1E-84 T 11-10-2018 AMS64_05940 46f1b76d3a2c96bc60adb0123f138f06 638 Gene3D G3DSA:2.10.10.20 19 72 7.9E-10 T 11-10-2018 AMS64_05940 46f1b76d3a2c96bc60adb0123f138f06 638 Pfam PF00182 Chitinase class I 174 399 1.1E-37 T 11-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMS64_05940 46f1b76d3a2c96bc60adb0123f138f06 638 SMART SM00495 583 634 8.3E-5 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_05940 46f1b76d3a2c96bc60adb0123f138f06 638 SMART SM00495 22 71 3.1E-6 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_05940 46f1b76d3a2c96bc60adb0123f138f06 638 SUPERFAMILY SSF51055 20 72 2.35E-8 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_05940 46f1b76d3a2c96bc60adb0123f138f06 638 Gene3D G3DSA:1.10.530.10 162 411 3.1E-84 T 11-10-2018 AMS64_05940 46f1b76d3a2c96bc60adb0123f138f06 638 Gene3D G3DSA:2.60.40.10 480 572 1.7E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_05940 46f1b76d3a2c96bc60adb0123f138f06 638 SUPERFAMILY SSF53955 154 414 1.52E-60 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_15100 b390504b13720577ec8d89c5eefb6400 299 Gene3D G3DSA:3.30.70.3070 164 183 2.7E-47 T 11-10-2018 AMS64_15100 b390504b13720577ec8d89c5eefb6400 299 Gene3D G3DSA:1.10.8.410 246 298 6.1E-24 T 11-10-2018 AMS64_15100 b390504b13720577ec8d89c5eefb6400 299 Pfam PF00700 Bacterial flagellin C-terminal helical region 218 298 1.7E-24 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMS64_15100 b390504b13720577ec8d89c5eefb6400 299 SUPERFAMILY SSF64518 1 298 1.83E-96 T 11-10-2018 AMS64_15100 b390504b13720577ec8d89c5eefb6400 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.4E-42 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMS64_15100 b390504b13720577ec8d89c5eefb6400 299 PRINTS PR00207 Flagellin signature 37 54 8.5E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMS64_15100 b390504b13720577ec8d89c5eefb6400 299 PRINTS PR00207 Flagellin signature 111 134 8.5E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMS64_15100 b390504b13720577ec8d89c5eefb6400 299 PRINTS PR00207 Flagellin signature 76 95 8.5E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMS64_15100 b390504b13720577ec8d89c5eefb6400 299 Gene3D G3DSA:1.20.1330.10 60 162 2.7E-47 T 11-10-2018 AMS64_15100 b390504b13720577ec8d89c5eefb6400 299 Gene3D G3DSA:1.20.1330.10 198 243 8.5E-10 T 11-10-2018 AMS64_12520 ff5dfa345489f9027627b5c7d557a676 471 Gene3D G3DSA:3.40.640.10 140 359 4.7E-98 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_12520 ff5dfa345489f9027627b5c7d557a676 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.1E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_12520 ff5dfa345489f9027627b5c7d557a676 471 Gene3D G3DSA:3.90.1150.10 99 464 4.7E-98 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_12520 ff5dfa345489f9027627b5c7d557a676 471 Gene3D G3DSA:1.10.10.10 1 98 6.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_12520 ff5dfa345489f9027627b5c7d557a676 471 SMART SM00345 7 66 3.7E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_12520 ff5dfa345489f9027627b5c7d557a676 471 Pfam PF00155 Aminotransferase class I and II 146 460 4.5E-33 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMS64_12520 ff5dfa345489f9027627b5c7d557a676 471 SUPERFAMILY SSF46785 1 70 1.88E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_12520 ff5dfa345489f9027627b5c7d557a676 471 SUPERFAMILY SSF53383 93 465 7.61E-94 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 3.7E-71 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 SMART SM00846 3 150 7.9E-96 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 PIRSF PIRSF000149 1 331 1.7E-134 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.2E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.2E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.2E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.2E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.2E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.6E-40 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 SUPERFAMILY SSF51735 3 166 2.63E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 5.0E-137 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 Gene3D G3DSA:3.40.50.720 4 326 1.7E-156 T 11-10-2018 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 SUPERFAMILY SSF55347 149 312 6.55E-78 T 11-10-2018 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 Gene3D G3DSA:3.30.360.10 149 314 1.7E-156 T 11-10-2018 AMS64_04650 dd921ceee4ecdc0aa660201046bc0de9 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_15950 411edbc785a295d23dfa0363697804e6 548 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 6 540 3.5E-219 T 11-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 AMS64_15950 411edbc785a295d23dfa0363697804e6 548 Pfam PF00501 AMP-binding enzyme 34 450 1.1E-75 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMS64_15950 411edbc785a295d23dfa0363697804e6 548 Gene3D G3DSA:3.40.50.12780 5 444 1.1E-121 T 11-10-2018 AMS64_15950 411edbc785a295d23dfa0363697804e6 548 Gene3D G3DSA:3.30.300.310 446 548 9.4E-28 T 11-10-2018 AMS64_15950 411edbc785a295d23dfa0363697804e6 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 459 533 6.9E-12 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMS64_15950 411edbc785a295d23dfa0363697804e6 548 SUPERFAMILY SSF56801 6 545 1.83E-128 T 11-10-2018 AMS64_15950 411edbc785a295d23dfa0363697804e6 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 204 215 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMS64_15105 bc5a95d54de7165cdba56938a7bc9207 300 PRINTS PR00207 Flagellin signature 37 54 2.2E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMS64_15105 bc5a95d54de7165cdba56938a7bc9207 300 PRINTS PR00207 Flagellin signature 76 95 2.2E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMS64_15105 bc5a95d54de7165cdba56938a7bc9207 300 PRINTS PR00207 Flagellin signature 111 134 2.2E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMS64_15105 bc5a95d54de7165cdba56938a7bc9207 300 SUPERFAMILY SSF64518 1 299 4.18E-94 T 11-10-2018 AMS64_15105 bc5a95d54de7165cdba56938a7bc9207 300 Pfam PF00700 Bacterial flagellin C-terminal helical region 215 298 4.1E-23 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMS64_15105 bc5a95d54de7165cdba56938a7bc9207 300 Gene3D G3DSA:2.170.280.10 173 182 2.7E-79 T 11-10-2018 AMS64_15105 bc5a95d54de7165cdba56938a7bc9207 300 Gene3D G3DSA:1.20.1330.10 45 172 2.7E-79 T 11-10-2018 AMS64_15105 bc5a95d54de7165cdba56938a7bc9207 300 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 5.9E-41 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMS64_15105 bc5a95d54de7165cdba56938a7bc9207 300 Gene3D G3DSA:1.10.8.410 246 299 7.8E-23 T 11-10-2018 AMS64_15105 bc5a95d54de7165cdba56938a7bc9207 300 Gene3D G3DSA:1.20.58.1830 5 33 2.7E-79 T 11-10-2018 AMS64_18960 9d7b2f1a18a92573ab1b89aef6378a4e 387 SUPERFAMILY SSF48695 8 185 2.65E-45 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AMS64_18960 9d7b2f1a18a92573ab1b89aef6378a4e 387 Gene3D G3DSA:1.10.3820.10 9 187 9.6E-35 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily AMS64_18960 9d7b2f1a18a92573ab1b89aef6378a4e 387 PIRSF PIRSF000014 1 386 9.2E-140 T 11-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AMS64_18960 9d7b2f1a18a92573ab1b89aef6378a4e 387 SUPERFAMILY SSF46626 326 378 9.18E-5 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_18960 9d7b2f1a18a92573ab1b89aef6378a4e 387 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 185 1.5E-62 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AMS64_06930 ad9c73ad03dacad5f6e0deb31ecc1c49 360 SUPERFAMILY SSF46458 5 162 4.8E-36 T 11-10-2018 IPR009050 Globin-like superfamily AMS64_06930 ad9c73ad03dacad5f6e0deb31ecc1c49 360 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 352 1.3E-37 T 11-10-2018 IPR000160 GGDEF domain AMS64_06930 ad9c73ad03dacad5f6e0deb31ecc1c49 360 Gene3D G3DSA:1.10.490.10 17 172 7.8E-41 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMS64_06930 ad9c73ad03dacad5f6e0deb31ecc1c49 360 Pfam PF11563 Protoglobin 18 168 1.3E-34 T 11-10-2018 AMS64_06930 ad9c73ad03dacad5f6e0deb31ecc1c49 360 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 355 3.1E-38 T 11-10-2018 IPR000160 GGDEF domain AMS64_06930 ad9c73ad03dacad5f6e0deb31ecc1c49 360 Gene3D G3DSA:3.30.70.270 188 355 4.2E-46 T 11-10-2018 AMS64_06930 ad9c73ad03dacad5f6e0deb31ecc1c49 360 SMART SM00267 191 358 1.2E-43 T 11-10-2018 IPR000160 GGDEF domain AMS64_06930 ad9c73ad03dacad5f6e0deb31ecc1c49 360 SUPERFAMILY SSF55073 207 350 1.49E-38 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_01470 e741e4440864b95cac1c133d4bda2779 838 Gene3D G3DSA:3.40.50.300 209 392 4.8E-11 T 11-10-2018 AMS64_01470 e741e4440864b95cac1c133d4bda2779 838 Gene3D G3DSA:1.25.40.10 587 658 5.0E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_01470 e741e4440864b95cac1c133d4bda2779 838 Pfam PF04326 Putative DNA-binding domain 41 146 4.9E-7 T 11-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 AMS64_01470 e741e4440864b95cac1c133d4bda2779 838 SUPERFAMILY SSF52540 217 455 3.84E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01470 e741e4440864b95cac1c133d4bda2779 838 Gene3D G3DSA:3.30.950.30 32 180 1.0E-10 T 11-10-2018 IPR038461 Schlafen, AAA domain superfamily AMS64_12410 ed48dbd50163b69a0540ffba2d6a5e26 252 SMART SM01134 72 233 4.2E-71 T 11-10-2018 AMS64_12410 ed48dbd50163b69a0540ffba2d6a5e26 252 SUPERFAMILY SSF46785 3 77 7.44E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_12410 ed48dbd50163b69a0540ffba2d6a5e26 252 SUPERFAMILY SSF100950 73 233 3.64E-28 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AMS64_12410 ed48dbd50163b69a0540ffba2d6a5e26 252 Gene3D G3DSA:1.10.10.10 1 59 8.9E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_12410 ed48dbd50163b69a0540ffba2d6a5e26 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMS64_12410 ed48dbd50163b69a0540ffba2d6a5e26 252 Gene3D G3DSA:3.30.750.70 68 134 1.4E-6 T 11-10-2018 AMS64_12410 ed48dbd50163b69a0540ffba2d6a5e26 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.2E-11 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_12410 ed48dbd50163b69a0540ffba2d6a5e26 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.2E-11 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_12410 ed48dbd50163b69a0540ffba2d6a5e26 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 2.9E-22 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_12410 ed48dbd50163b69a0540ffba2d6a5e26 252 SMART SM00420 6 58 1.0E-22 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_12410 ed48dbd50163b69a0540ffba2d6a5e26 252 Pfam PF00455 DeoR C terminal sensor domain 75 232 3.8E-54 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AMS64_03775 a7de9f0478d8f7a445c2f69a44eda6fa 173 Gene3D G3DSA:3.40.630.30 1 157 3.3E-26 T 11-10-2018 AMS64_03775 a7de9f0478d8f7a445c2f69a44eda6fa 173 Pfam PF00583 Acetyltransferase (GNAT) family 26 126 3.8E-9 T 11-10-2018 IPR000182 GNAT domain AMS64_03775 a7de9f0478d8f7a445c2f69a44eda6fa 173 SUPERFAMILY SSF55729 3 143 3.43E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_21135 38e792387e145b3aac62dd2c2122ff8c 406 SMART SM00876 291 395 4.0E-30 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMS64_21135 38e792387e145b3aac62dd2c2122ff8c 406 SUPERFAMILY SSF102114 71 367 5.49E-49 T 11-10-2018 AMS64_21135 38e792387e145b3aac62dd2c2122ff8c 406 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 37 401 7.2E-157 T 11-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 AMS64_21135 38e792387e145b3aac62dd2c2122ff8c 406 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 291 394 2.9E-22 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMS64_21135 38e792387e145b3aac62dd2c2122ff8c 406 Gene3D G3DSA:3.20.20.70 45 399 4.6E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_19910 872208b77c68997de9801e91f20b8bde 591 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 51 99 9.5E-10 T 11-10-2018 IPR011096 FTP domain AMS64_19910 872208b77c68997de9801e91f20b8bde 591 Pfam PF03413 Peptidase propeptide and YPEB domain 115 180 3.4E-8 T 11-10-2018 IPR025711 PepSY domain AMS64_19910 872208b77c68997de9801e91f20b8bde 591 Gene3D G3DSA:3.10.450.490 19 107 6.1E-8 T 11-10-2018 AMS64_19910 872208b77c68997de9801e91f20b8bde 591 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 288 308 2.9E-27 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AMS64_19910 872208b77c68997de9801e91f20b8bde 591 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 405 421 2.9E-27 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AMS64_19910 872208b77c68997de9801e91f20b8bde 591 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 322 338 2.9E-27 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AMS64_19910 872208b77c68997de9801e91f20b8bde 591 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 343 354 2.9E-27 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AMS64_19910 872208b77c68997de9801e91f20b8bde 591 Gene3D G3DSA:1.10.390.10 336 485 2.3E-49 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AMS64_19910 872208b77c68997de9801e91f20b8bde 591 SUPERFAMILY SSF55486 187 479 3.3E-88 T 11-10-2018 AMS64_19910 872208b77c68997de9801e91f20b8bde 591 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 512 577 2.3E-14 T 11-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AMS64_19910 872208b77c68997de9801e91f20b8bde 591 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 196 331 5.4E-37 T 11-10-2018 IPR013856 Peptidase M4 domain GO:0004222 AMS64_19910 872208b77c68997de9801e91f20b8bde 591 Gene3D G3DSA:2.60.120.380 490 591 5.6E-41 T 11-10-2018 AMS64_19910 872208b77c68997de9801e91f20b8bde 591 Gene3D G3DSA:3.10.170.10 186 335 1.5E-63 T 11-10-2018 AMS64_19910 872208b77c68997de9801e91f20b8bde 591 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 334 478 1.4E-34 T 11-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 AMS64_19910 872208b77c68997de9801e91f20b8bde 591 Gene3D G3DSA:3.10.450.40 108 185 9.3E-23 T 11-10-2018 AMS64_07000 f94604c55e2261cb3d24ec672e4e84ca 290 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 279 6.2E-28 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AMS64_07000 f94604c55e2261cb3d24ec672e4e84ca 290 Gene3D G3DSA:3.30.420.40 5 114 1.4E-63 T 11-10-2018 AMS64_07000 f94604c55e2261cb3d24ec672e4e84ca 290 Gene3D G3DSA:3.30.420.40 115 260 1.4E-63 T 11-10-2018 AMS64_07000 f94604c55e2261cb3d24ec672e4e84ca 290 SUPERFAMILY SSF53067 115 280 1.54E-38 T 11-10-2018 AMS64_07000 f94604c55e2261cb3d24ec672e4e84ca 290 SUPERFAMILY SSF53067 2 112 1.79E-20 T 11-10-2018 AMS64_01240 cb3d2d8b64b34341cbdf80982a22934d 207 Gene3D G3DSA:1.10.10.10 1 69 1.8E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_01240 cb3d2d8b64b34341cbdf80982a22934d 207 SUPERFAMILY SSF46785 3 69 1.56E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_01240 cb3d2d8b64b34341cbdf80982a22934d 207 Pfam PF01726 LexA DNA binding domain 1 65 1.1E-30 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AMS64_01240 cb3d2d8b64b34341cbdf80982a22934d 207 Hamap MF_00015 LexA repressor [lexA]. 3 204 32.619 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMS64_01240 cb3d2d8b64b34341cbdf80982a22934d 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 1.3E-79 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMS64_01240 cb3d2d8b64b34341cbdf80982a22934d 207 SUPERFAMILY SSF51306 81 203 9.24E-38 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMS64_01240 cb3d2d8b64b34341cbdf80982a22934d 207 Pfam PF00717 Peptidase S24-like 119 184 3.1E-16 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMS64_01240 cb3d2d8b64b34341cbdf80982a22934d 207 Gene3D G3DSA:2.10.109.10 85 207 2.9E-45 T 11-10-2018 AMS64_01240 cb3d2d8b64b34341cbdf80982a22934d 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 127 138 1.2E-12 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMS64_01240 cb3d2d8b64b34341cbdf80982a22934d 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 116 126 1.2E-12 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMS64_01240 cb3d2d8b64b34341cbdf80982a22934d 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 155 167 1.2E-12 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMS64_03645 5173cd1780b244cc18fdb43e30a75b10 315 SMART SM00354 4 74 3.1E-32 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_03645 5173cd1780b244cc18fdb43e30a75b10 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 4.9E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_03645 5173cd1780b244cc18fdb43e30a75b10 315 SUPERFAMILY SSF53822 63 311 2.36E-60 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_03645 5173cd1780b244cc18fdb43e30a75b10 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 311 9.5E-137 T 11-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 AMS64_03645 5173cd1780b244cc18fdb43e30a75b10 315 Pfam PF13377 Periplasmic binding protein-like domain 168 306 1.5E-17 T 11-10-2018 AMS64_03645 5173cd1780b244cc18fdb43e30a75b10 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 11-10-2018 AMS64_03645 5173cd1780b244cc18fdb43e30a75b10 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 4.2E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_03645 5173cd1780b244cc18fdb43e30a75b10 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 4.2E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_03645 5173cd1780b244cc18fdb43e30a75b10 315 Gene3D G3DSA:3.40.50.2300 163 279 1.9E-68 T 11-10-2018 AMS64_03645 5173cd1780b244cc18fdb43e30a75b10 315 SUPERFAMILY SSF47413 3 61 4.18E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_03645 5173cd1780b244cc18fdb43e30a75b10 315 Gene3D G3DSA:1.10.260.40 3 62 4.2E-21 T 11-10-2018 AMS64_03645 5173cd1780b244cc18fdb43e30a75b10 315 Gene3D G3DSA:3.40.50.2300 68 302 1.9E-68 T 11-10-2018 AMS64_02810 373972f3d598dda7ae350998132e9bee 186 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 178 7.0E-37 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AMS64_02810 373972f3d598dda7ae350998132e9bee 186 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 2 184 23.221 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AMS64_02810 373972f3d598dda7ae350998132e9bee 186 Gene3D G3DSA:2.60.450.10 59 186 1.6E-33 T 11-10-2018 AMS64_02810 373972f3d598dda7ae350998132e9bee 186 PIRSF PIRSF028513 1 185 6.1E-38 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AMS64_02810 373972f3d598dda7ae350998132e9bee 186 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 181 1.3E-44 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AMS64_01270 5e92ab3b7a82b6328abc8b63220511ef 231 Gene3D G3DSA:1.10.10.10 128 231 8.5E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_01270 5e92ab3b7a82b6328abc8b63220511ef 231 SMART SM00862 151 227 9.6E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_01270 5e92ab3b7a82b6328abc8b63220511ef 231 SMART SM00448 2 112 1.6E-46 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_01270 5e92ab3b7a82b6328abc8b63220511ef 231 Pfam PF00072 Response regulator receiver domain 4 113 6.2E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_01270 5e92ab3b7a82b6328abc8b63220511ef 231 SUPERFAMILY SSF46894 127 228 3.12E-24 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_01270 5e92ab3b7a82b6328abc8b63220511ef 231 SUPERFAMILY SSF52172 2 125 4.7E-44 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_01270 5e92ab3b7a82b6328abc8b63220511ef 231 Gene3D G3DSA:3.40.50.2300 1 127 1.2E-41 T 11-10-2018 AMS64_01270 5e92ab3b7a82b6328abc8b63220511ef 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 1.8E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_06785 d73d068629a4524f9bfa4251be755032 198 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AMS64_06785 d73d068629a4524f9bfa4251be755032 198 SUPERFAMILY SSF53178 5 194 1.24E-70 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AMS64_06785 d73d068629a4524f9bfa4251be755032 198 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.617 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMS64_06785 d73d068629a4524f9bfa4251be755032 198 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 5.6E-55 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMS64_06785 d73d068629a4524f9bfa4251be755032 198 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AMS64_06785 d73d068629a4524f9bfa4251be755032 198 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 192 6.0E-69 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMS64_06785 d73d068629a4524f9bfa4251be755032 198 Gene3D G3DSA:3.40.50.1470 1 196 3.1E-73 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 1.0E-57 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 Gene3D G3DSA:3.40.50.1370 5 329 9.8E-146 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 85.433 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.5E-44 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 SUPERFAMILY SSF53671 4 333 3.8E-99 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 6.5E-134 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 Gene3D G3DSA:3.40.50.1370 151 319 9.8E-146 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.6E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 3.6E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 3.6E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.6E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.7E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.7E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.7E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.7E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMS64_22245 e984eafa6bbeaf9e557e345c3166699c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.7E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMS64_07950 335559cc4128ac8c6dc0565cea8acc57 332 SMART SM00382 32 235 3.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_07950 335559cc4128ac8c6dc0565cea8acc57 332 Pfam PF00005 ABC transporter 24 187 3.2E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_07950 335559cc4128ac8c6dc0565cea8acc57 332 Gene3D G3DSA:3.40.50.300 2 331 2.0E-75 T 11-10-2018 AMS64_07950 335559cc4128ac8c6dc0565cea8acc57 332 SUPERFAMILY SSF52540 3 269 2.71E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07950 335559cc4128ac8c6dc0565cea8acc57 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.0E-16 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_07950 335559cc4128ac8c6dc0565cea8acc57 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 323 2.0E-22 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_14290 383ba99f2a0cc1a15bc9bb068bba1a44 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.3E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_14290 383ba99f2a0cc1a15bc9bb068bba1a44 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.965 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AMS64_14290 383ba99f2a0cc1a15bc9bb068bba1a44 94 Gene3D G3DSA:4.10.520.10 2 39 1.5E-9 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMS64_14290 383ba99f2a0cc1a15bc9bb068bba1a44 94 Gene3D G3DSA:4.10.520.10 40 92 1.3E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMS64_14290 383ba99f2a0cc1a15bc9bb068bba1a44 94 SUPERFAMILY SSF47729 1 91 7.21E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMS64_14290 383ba99f2a0cc1a15bc9bb068bba1a44 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_14290 383ba99f2a0cc1a15bc9bb068bba1a44 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_14290 383ba99f2a0cc1a15bc9bb068bba1a44 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_14290 383ba99f2a0cc1a15bc9bb068bba1a44 94 SMART SM00411 1 91 3.2E-41 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_14290 383ba99f2a0cc1a15bc9bb068bba1a44 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMS64_14290 383ba99f2a0cc1a15bc9bb068bba1a44 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 94 1.1E-47 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AMS64_08500 150084744dedd4fd4f1ed52773944775 846 SUPERFAMILY SSF48019 244 361 1.05E-29 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMS64_08500 150084744dedd4fd4f1ed52773944775 846 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 359 5.8E-28 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AMS64_08500 150084744dedd4fd4f1ed52773944775 846 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 7.3E-131 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AMS64_08500 150084744dedd4fd4f1ed52773944775 846 Gene3D G3DSA:1.20.272.10 242 361 1.4E-40 T 11-10-2018 AMS64_08500 150084744dedd4fd4f1ed52773944775 846 SUPERFAMILY SSF52540 33 222 1.09E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08500 150084744dedd4fd4f1ed52773944775 846 Gene3D G3DSA:3.30.300.150 709 826 1.7E-28 T 11-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_08500 150084744dedd4fd4f1ed52773944775 846 Gene3D G3DSA:1.10.8.60 8 239 5.3E-101 T 11-10-2018 AMS64_08500 150084744dedd4fd4f1ed52773944775 846 Gene3D G3DSA:3.40.50.300 13 177 5.3E-101 T 11-10-2018 AMS64_08500 150084744dedd4fd4f1ed52773944775 846 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.6E-43 T 11-10-2018 AMS64_08500 150084744dedd4fd4f1ed52773944775 846 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 712 841 6.4E-34 T 11-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_08500 150084744dedd4fd4f1ed52773944775 846 SMART SM00382 37 178 3.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_07355 bf559c39e0eeda520c95046231f6c667 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 207 225 1.6E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_07355 bf559c39e0eeda520c95046231f6c667 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 227 244 1.6E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_07355 bf559c39e0eeda520c95046231f6c667 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 271 286 1.6E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_07355 bf559c39e0eeda520c95046231f6c667 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.6E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_07355 bf559c39e0eeda520c95046231f6c667 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 1.6E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_07355 bf559c39e0eeda520c95046231f6c667 376 SUPERFAMILY SSF160544 243 351 3.27E-39 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AMS64_07355 bf559c39e0eeda520c95046231f6c667 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 347 6.7E-123 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_07355 bf559c39e0eeda520c95046231f6c667 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 352 6.1E-125 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AMS64_07355 bf559c39e0eeda520c95046231f6c667 376 Gene3D G3DSA:3.40.1690.10 216 358 4.4E-56 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AMS64_10475 c20b3d1266532dd1fcb3511ba2266817 496 SUPERFAMILY SSF81606 297 492 8.89E-12 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMS64_10475 c20b3d1266532dd1fcb3511ba2266817 496 Pfam PF00072 Response regulator receiver domain 137 247 1.5E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_10475 c20b3d1266532dd1fcb3511ba2266817 496 Gene3D G3DSA:3.40.50.2300 130 267 3.8E-30 T 11-10-2018 AMS64_10475 c20b3d1266532dd1fcb3511ba2266817 496 SUPERFAMILY SSF52172 137 272 1.18E-29 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_10475 c20b3d1266532dd1fcb3511ba2266817 496 SUPERFAMILY SSF55874 32 117 1.08E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_10475 c20b3d1266532dd1fcb3511ba2266817 496 Gene3D G3DSA:3.30.565.10 2 129 1.8E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_10475 c20b3d1266532dd1fcb3511ba2266817 496 SMART SM00331 286 493 5.3E-12 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMS64_10475 c20b3d1266532dd1fcb3511ba2266817 496 SMART SM00448 135 247 9.2E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_10475 c20b3d1266532dd1fcb3511ba2266817 496 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 308 492 1.9E-25 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMS64_10475 c20b3d1266532dd1fcb3511ba2266817 496 Gene3D G3DSA:3.60.40.10 283 494 3.7E-33 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMS64_10475 c20b3d1266532dd1fcb3511ba2266817 496 Pfam PF13581 Histidine kinase-like ATPase domain 9 126 6.5E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_04345 bff038d1b6fa1ac1f7129176abbb7cbb 235 SUPERFAMILY SSF110849 29 224 2.67E-58 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AMS64_04345 bff038d1b6fa1ac1f7129176abbb7cbb 235 Pfam PF08857 Putative ParB-like nuclease 32 186 3.4E-49 T 11-10-2018 IPR014956 Putative ParB-like nuclease AMS64_04345 bff038d1b6fa1ac1f7129176abbb7cbb 235 Gene3D G3DSA:3.90.1530.10 24 153 2.3E-36 T 11-10-2018 AMS64_04345 bff038d1b6fa1ac1f7129176abbb7cbb 235 PIRSF PIRSF029669 21 227 5.8E-64 T 11-10-2018 IPR016932 Uncharacterised conserved protein UCP029669 AMS64_04345 bff038d1b6fa1ac1f7129176abbb7cbb 235 Gene3D G3DSA:1.10.8.10 154 216 6.2E-8 T 11-10-2018 AMS64_17205 6d0cdcc9c8b2951707ab233da181e6b6 522 Pfam PF01471 Putative peptidoglycan binding domain 454 504 1.0E-8 T 11-10-2018 IPR002477 Peptidoglycan binding-like AMS64_17205 6d0cdcc9c8b2951707ab233da181e6b6 522 Gene3D G3DSA:3.90.70.10 338 438 4.7E-54 T 11-10-2018 AMS64_17205 6d0cdcc9c8b2951707ab233da181e6b6 522 Gene3D G3DSA:1.10.101.10 439 508 4.7E-54 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AMS64_17205 6d0cdcc9c8b2951707ab233da181e6b6 522 Pfam PF13401 AAA domain 42 171 3.6E-24 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_17205 6d0cdcc9c8b2951707ab233da181e6b6 522 Gene3D G3DSA:3.40.50.300 27 186 1.4E-14 T 11-10-2018 AMS64_17205 6d0cdcc9c8b2951707ab233da181e6b6 522 SUPERFAMILY SSF47090 449 515 5.81E-10 T 11-10-2018 IPR036365 PGBD-like superfamily AMS64_17205 6d0cdcc9c8b2951707ab233da181e6b6 522 SMART SM00382 42 194 9.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_17205 6d0cdcc9c8b2951707ab233da181e6b6 522 SUPERFAMILY SSF52540 5 261 1.71E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08415 0158abc340644b59409088ad2817bcae 288 SUPERFAMILY SSF46785 3 85 3.69E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_08415 0158abc340644b59409088ad2817bcae 288 Gene3D G3DSA:3.40.190.10 161 254 7.4E-13 T 11-10-2018 AMS64_08415 0158abc340644b59409088ad2817bcae 288 Gene3D G3DSA:3.40.190.10 91 266 7.4E-13 T 11-10-2018 AMS64_08415 0158abc340644b59409088ad2817bcae 288 Pfam PF03466 LysR substrate binding domain 90 280 5.4E-22 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_08415 0158abc340644b59409088ad2817bcae 288 SUPERFAMILY SSF53850 90 282 2.53E-22 T 11-10-2018 AMS64_08415 0158abc340644b59409088ad2817bcae 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 8.4E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08415 0158abc340644b59409088ad2817bcae 288 Gene3D G3DSA:1.10.10.10 2 88 4.3E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_08415 0158abc340644b59409088ad2817bcae 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08415 0158abc340644b59409088ad2817bcae 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08415 0158abc340644b59409088ad2817bcae 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_10570 7401907fd147a94c994ec3e243760acd 440 SUPERFAMILY SSF50494 15 200 5.7E-12 T 11-10-2018 IPR009003 Peptidase S1, PA clan AMS64_10570 7401907fd147a94c994ec3e243760acd 440 Gene3D G3DSA:2.40.10.120 2 118 5.1E-6 T 11-10-2018 AMS64_03435 8edd47538643640091f807ed862c03f3 220 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 3.1E-48 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AMS64_03435 8edd47538643640091f807ed862c03f3 220 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 193 3.0E-68 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AMS64_03435 8edd47538643640091f807ed862c03f3 220 SMART SM01207 10 185 6.0E-82 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AMS64_03435 8edd47538643640091f807ed862c03f3 220 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.307 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 Gene3D G3DSA:2.40.50.100 185 234 1.7E-33 T 11-10-2018 AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 Gene3D G3DSA:2.40.50.320 403 473 1.2E-19 T 11-10-2018 AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 Gene3D G3DSA:2.40.50.100 116 150 8.9E-7 T 11-10-2018 AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 Pfam PF11604 Copper binding periplasmic protein CusF 405 470 7.6E-21 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 Gene3D G3DSA:2.40.420.20 90 101 8.9E-7 T 11-10-2018 AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 Gene3D G3DSA:2.40.420.20 312 402 2.0E-21 T 11-10-2018 AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 99 307 1.0E-80 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 SUPERFAMILY SSF111369 118 314 1.22E-19 T 11-10-2018 AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 Gene3D G3DSA:1.10.287.470 151 163 8.9E-7 T 11-10-2018 AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 Gene3D G3DSA:1.10.287.470 174 184 1.7E-33 T 11-10-2018 AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 174 386 5.3E-39 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 Gene3D G3DSA:2.40.30.170 235 309 1.7E-33 T 11-10-2018 AMS64_13045 1652ee1e3500bac2d9697a68eaaba53a 510 Gene3D G3DSA:2.40.30.170 102 115 8.9E-7 T 11-10-2018 AMS64_11885 bab110a0face908656615b10ea16fa91 458 SUPERFAMILY SSF47323 316 457 2.22E-38 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_11885 bab110a0face908656615b10ea16fa91 458 Gene3D G3DSA:1.20.120.640 306 458 1.2E-47 T 11-10-2018 AMS64_11885 bab110a0face908656615b10ea16fa91 458 Pfam PF09190 DALR domain 340 401 7.6E-26 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AMS64_11885 bab110a0face908656615b10ea16fa91 458 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 457 39.251 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AMS64_11885 bab110a0face908656615b10ea16fa91 458 SMART SM00840 340 401 1.7E-30 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AMS64_11885 bab110a0face908656615b10ea16fa91 458 SUPERFAMILY SSF52374 1 313 1.61E-103 T 11-10-2018 AMS64_11885 bab110a0face908656615b10ea16fa91 458 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 457 1.3E-187 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AMS64_11885 bab110a0face908656615b10ea16fa91 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.3E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMS64_11885 bab110a0face908656615b10ea16fa91 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.3E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMS64_11885 bab110a0face908656615b10ea16fa91 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.3E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMS64_11885 bab110a0face908656615b10ea16fa91 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.3E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMS64_11885 bab110a0face908656615b10ea16fa91 458 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 1.7E-137 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AMS64_11885 bab110a0face908656615b10ea16fa91 458 Gene3D G3DSA:3.40.50.620 1 305 2.1E-136 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_15755 af1e20d40f6d845264673253628b1ee8 402 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 5.0E-16 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMS64_15755 af1e20d40f6d845264673253628b1ee8 402 SUPERFAMILY SSF64518 1 402 9.42E-67 T 11-10-2018 AMS64_15755 af1e20d40f6d845264673253628b1ee8 402 Gene3D G3DSA:1.20.1330.10 40 233 7.6E-40 T 11-10-2018 AMS64_15755 af1e20d40f6d845264673253628b1ee8 402 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 401 6.1E-65 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AMS64_15755 af1e20d40f6d845264673253628b1ee8 402 Gene3D G3DSA:1.20.1330.10 248 378 2.3E-9 T 11-10-2018 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 5.5E-26 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 SUPERFAMILY SSF55021 384 476 6.54E-22 T 11-10-2018 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 Pfam PF13840 ACT domain 394 456 2.1E-7 T 11-10-2018 IPR027795 CASTOR, ACT domain AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 Pfam PF00742 Homoserine dehydrogenase 614 810 1.3E-46 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 SUPERFAMILY SSF51735 463 636 1.53E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 Gene3D G3DSA:3.40.50.720 466 811 4.1E-117 T 11-10-2018 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 Pfam PF00696 Amino acid kinase family 2 284 2.2E-41 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 Gene3D G3DSA:3.30.360.10 625 795 4.1E-117 T 11-10-2018 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 Gene3D G3DSA:3.40.1160.10 3 295 1.5E-82 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 Gene3D G3DSA:3.30.2130.10 302 463 5.4E-46 T 11-10-2018 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 Gene3D G3DSA:1.20.120.1320 41 142 1.5E-82 T 11-10-2018 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 PIRSF PIRSF000727 1 817 0.0 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.9E-130 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 SUPERFAMILY SSF53633 1 298 4.07E-72 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 SUPERFAMILY SSF55347 614 797 4.51E-49 T 11-10-2018 AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 Pfam PF01842 ACT domain 324 381 1.9E-9 T 11-10-2018 IPR002912 ACT domain AMS64_16825 198cb93aea28155de1bafaf392e3d9d6 819 SUPERFAMILY SSF55021 303 381 9.16E-20 T 11-10-2018 AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 2.4E-83 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 4.5E-38 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 SUPERFAMILY SSF52440 1 113 1.22E-45 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 Gene3D G3DSA:3.30.470.20 86 433 3.7E-156 T 11-10-2018 AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 3.0E-239 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 SUPERFAMILY SSF51246 331 443 3.51E-43 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 Gene3D G3DSA:3.30.1490.20 131 203 3.7E-156 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.4E-43 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 Gene3D G3DSA:3.40.50.20 1 85 9.1E-34 T 11-10-2018 AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 SMART SM00878 336 441 1.0E-63 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 SUPERFAMILY SSF56059 83 345 1.22E-70 T 11-10-2018 AMS64_19005 df2332d824da88e00ff3dac9b36f98eb 446 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMS64_20585 45b93cff1f9dbbabea829d0b5422b0ad 398 Gene3D G3DSA:3.90.550.10 13 245 7.3E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_20585 45b93cff1f9dbbabea829d0b5422b0ad 398 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 1 391 2.2E-191 T 11-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 AMS64_20585 45b93cff1f9dbbabea829d0b5422b0ad 398 SUPERFAMILY SSF53448 31 298 5.49E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_20585 45b93cff1f9dbbabea829d0b5422b0ad 398 ProDom PD339107 ALGINATE ALG8 BIOSYNTHESIS TRANSFERASE TRANSMEMBRANE MEMBRANE 2.4.1.- GLYCOSYL GLYCOSYLTRANSFERASE PRECURSOR 26 237 6.0E-5 T 11-10-2018 AMS64_20585 45b93cff1f9dbbabea829d0b5422b0ad 398 Pfam PF13641 Glycosyltransferase like family 2 34 255 2.4E-38 T 11-10-2018 AMS64_13365 9265ad907ae7704ea812df61160c941f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.7E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_13365 9265ad907ae7704ea812df61160c941f 299 Gene3D G3DSA:3.40.190.290 91 290 6.2E-70 T 11-10-2018 AMS64_13365 9265ad907ae7704ea812df61160c941f 299 Gene3D G3DSA:1.10.10.10 3 89 5.7E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_13365 9265ad907ae7704ea812df61160c941f 299 Pfam PF03466 LysR substrate binding domain 88 289 2.2E-46 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_13365 9265ad907ae7704ea812df61160c941f 299 SUPERFAMILY SSF46785 5 111 1.34E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_13365 9265ad907ae7704ea812df61160c941f 299 SUPERFAMILY SSF53850 88 290 1.81E-49 T 11-10-2018 AMS64_20465 9261dd37bd41aede1722bd3dcbcf9dae 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 236 1.7E-10 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_20465 9261dd37bd41aede1722bd3dcbcf9dae 245 Gene3D G3DSA:3.40.190.10 102 197 4.8E-14 T 11-10-2018 AMS64_20465 9261dd37bd41aede1722bd3dcbcf9dae 245 Gene3D G3DSA:3.40.190.10 44 235 4.8E-14 T 11-10-2018 AMS64_20465 9261dd37bd41aede1722bd3dcbcf9dae 245 SUPERFAMILY SSF53850 20 237 6.08E-25 T 11-10-2018 AMS64_11830 4e3a3cf17f1a8284eeae5af832e0b8bd 756 Pfam PF07664 Ferrous iron transport protein B C terminus 451 503 4.0E-19 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AMS64_11830 4e3a3cf17f1a8284eeae5af832e0b8bd 756 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 3.5E-181 T 11-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AMS64_11830 4e3a3cf17f1a8284eeae5af832e0b8bd 756 SUPERFAMILY SSF52540 3 165 1.24E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11830 4e3a3cf17f1a8284eeae5af832e0b8bd 756 Gene3D G3DSA:3.40.50.300 5 188 8.7E-45 T 11-10-2018 AMS64_11830 4e3a3cf17f1a8284eeae5af832e0b8bd 756 Pfam PF07670 Nucleoside recognition 348 438 1.9E-12 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AMS64_11830 4e3a3cf17f1a8284eeae5af832e0b8bd 756 Pfam PF07670 Nucleoside recognition 509 690 2.2E-34 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AMS64_11830 4e3a3cf17f1a8284eeae5af832e0b8bd 756 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.2E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_11830 4e3a3cf17f1a8284eeae5af832e0b8bd 756 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 1.2E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_11830 4e3a3cf17f1a8284eeae5af832e0b8bd 756 Pfam PF02421 Ferrous iron transport protein B 5 160 1.3E-58 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AMS64_19075 ecc9e36b56825688ac1315471ddac977 135 Gene3D G3DSA:3.30.420.270 61 129 2.9E-10 T 11-10-2018 AMS64_19075 ecc9e36b56825688ac1315471ddac977 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 132 1.6E-30 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMS64_07935 8f14b7b4220772aad595877264cab0c9 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 98.58 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMS64_07935 8f14b7b4220772aad595877264cab0c9 200 Gene3D G3DSA:3.40.1360.10 77 199 2.9E-39 T 11-10-2018 AMS64_07935 8f14b7b4220772aad595877264cab0c9 200 Gene3D G3DSA:1.10.8.420 1 52 2.6E-15 T 11-10-2018 AMS64_07935 8f14b7b4220772aad595877264cab0c9 200 Pfam PF13662 Toprim domain 83 172 1.3E-22 T 11-10-2018 IPR006171 TOPRIM domain AMS64_07935 8f14b7b4220772aad595877264cab0c9 200 Pfam PF02132 RecR protein 41 77 5.0E-13 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AMS64_07935 8f14b7b4220772aad595877264cab0c9 200 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 1.1E-76 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMS64_07935 8f14b7b4220772aad595877264cab0c9 200 SUPERFAMILY SSF111304 2 199 2.75E-70 T 11-10-2018 IPR023627 Recombination protein RecR AMS64_07935 8f14b7b4220772aad595877264cab0c9 200 SMART SM00493 81 166 9.2E-20 T 11-10-2018 IPR006171 TOPRIM domain AMS64_00810 4c174b23f42378a1f3a32bfacb4f12d8 277 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 83 9.4E-28 T 11-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 AMS64_00810 4c174b23f42378a1f3a32bfacb4f12d8 277 SUPERFAMILY SSF144091 96 272 3.66E-38 T 11-10-2018 AMS64_00810 4c174b23f42378a1f3a32bfacb4f12d8 277 Pfam PF01694 Rhomboid family 135 273 7.3E-29 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMS64_00810 4c174b23f42378a1f3a32bfacb4f12d8 277 Gene3D G3DSA:1.20.1540.10 94 273 1.0E-52 T 11-10-2018 IPR035952 Rhomboid-like superfamily AMS64_00810 4c174b23f42378a1f3a32bfacb4f12d8 277 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 273 3.6E-110 T 11-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AMS64_00810 4c174b23f42378a1f3a32bfacb4f12d8 277 Gene3D G3DSA:3.30.70.2350 1 67 1.9E-21 T 11-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily AMS64_05230 254225feba3404e4aa26c474aef722e2 415 Pfam PF00271 Helicase conserved C-terminal domain 241 341 1.4E-26 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_05230 254225feba3404e4aa26c474aef722e2 415 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMS64_05230 254225feba3404e4aa26c474aef722e2 415 Gene3D G3DSA:3.40.50.300 216 408 2.3E-47 T 11-10-2018 AMS64_05230 254225feba3404e4aa26c474aef722e2 415 Pfam PF00270 DEAD/DEAH box helicase 28 194 8.4E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_05230 254225feba3404e4aa26c474aef722e2 415 SUPERFAMILY SSF52540 76 358 2.02E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_05230 254225feba3404e4aa26c474aef722e2 415 SMART SM00490 260 341 2.6E-32 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_05230 254225feba3404e4aa26c474aef722e2 415 SMART SM00487 23 224 8.1E-63 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_05230 254225feba3404e4aa26c474aef722e2 415 Gene3D G3DSA:3.40.50.300 1 212 4.3E-80 T 11-10-2018 AMS64_08850 d78c2110234d4aa00a3392b2a620251f 461 Gene3D G3DSA:3.30.1330.90 10 160 1.2E-54 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AMS64_08850 d78c2110234d4aa00a3392b2a620251f 461 Pfam PF03315 Serine dehydratase beta chain 3 156 4.8E-59 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AMS64_08850 d78c2110234d4aa00a3392b2a620251f 461 SUPERFAMILY SSF143548 16 158 3.66E-47 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AMS64_08850 d78c2110234d4aa00a3392b2a620251f 461 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 458 5.4E-215 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AMS64_08850 d78c2110234d4aa00a3392b2a620251f 461 Pfam PF03313 Serine dehydratase alpha chain 191 455 1.1E-102 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 11-10-2018 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 SUPERFAMILY SSF82693 39 132 1.24E-21 T 11-10-2018 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 SUPERFAMILY SSF82693 565 665 1.78E-24 T 11-10-2018 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 SUPERFAMILY SSF82866 802 1023 2.35E-44 T 11-10-2018 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 SUPERFAMILY SSF82714 183 272 8.89E-22 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 Gene3D G3DSA:3.30.70.1440 665 861 0.0 T 11-10-2018 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 Gene3D G3DSA:3.30.70.1430 38 813 0.0 T 11-10-2018 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.6E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.6E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.6E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.6E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.6E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.6E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.6E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.6E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.6E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 11-10-2018 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 SUPERFAMILY SSF82714 720 802 1.7E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 Gene3D G3DSA:3.30.70.1430 567 664 0.0 T 11-10-2018 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 SUPERFAMILY SSF82693 135 329 4.32E-24 T 11-10-2018 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 SUPERFAMILY SSF82866 296 498 1.83E-47 T 11-10-2018 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 Gene3D G3DSA:1.20.1640.10 513 1018 0.0 T 11-10-2018 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1026 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13155 d02fa0d13cd3df769ecca4dd5c9d5116 1044 Gene3D G3DSA:3.30.2090.10 717 805 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_17795 d5243026e8fd5f74cd8fe9a556e0323e 430 Pfam PF03222 Tryptophan/tyrosine permease family 32 396 2.1E-14 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AMS64_17795 d5243026e8fd5f74cd8fe9a556e0323e 430 TIGRFAM TIGR00814 stp: serine transporter 21 419 8.0E-180 T 11-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 AMS64_18695 8c84ac29f46ed0767f171a9a01d463e3 362 SUPERFAMILY SSF53901 3 323 2.28E-66 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_18695 8c84ac29f46ed0767f171a9a01d463e3 362 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 322 64.896 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMS64_18695 8c84ac29f46ed0767f171a9a01d463e3 362 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 322 2.9E-112 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMS64_18695 8c84ac29f46ed0767f171a9a01d463e3 362 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 233 322 2.3E-36 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMS64_18695 8c84ac29f46ed0767f171a9a01d463e3 362 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 105 182 6.4E-29 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMS64_18695 8c84ac29f46ed0767f171a9a01d463e3 362 Gene3D G3DSA:3.40.47.10 1 360 4.7E-144 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_01775 2e41c391ec9b278a203dd8e423a20f95 216 Gene3D G3DSA:2.40.128.590 29 215 2.2E-32 T 11-10-2018 IPR038672 Chromophore lyase CpcT/CpeT superfamily AMS64_01775 2e41c391ec9b278a203dd8e423a20f95 216 Pfam PF06206 CpeT/CpcT family (DUF1001) 35 208 1.5E-34 T 11-10-2018 IPR010404 Chromophore lyase CpcT/CpeT GO:0016829|GO:0017009 AMS64_14530 a0899dbe5f191ed7c0bdb12c392e2111 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 4.1E-50 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14530 a0899dbe5f191ed7c0bdb12c392e2111 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 3.6E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_14530 a0899dbe5f191ed7c0bdb12c392e2111 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_14530 a0899dbe5f191ed7c0bdb12c392e2111 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_14530 a0899dbe5f191ed7c0bdb12c392e2111 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 152 27.109 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14530 a0899dbe5f191ed7c0bdb12c392e2111 180 Gene3D G3DSA:3.30.70.3270 33 172 2.1E-41 T 11-10-2018 AMS64_14530 a0899dbe5f191ed7c0bdb12c392e2111 180 SUPERFAMILY SSF54862 33 154 1.72E-27 T 11-10-2018 AMS64_18690 f5b6344fddeb06bfae63381f3d90d045 313 Pfam PF03466 LysR substrate binding domain 94 289 5.8E-20 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_18690 f5b6344fddeb06bfae63381f3d90d045 313 Gene3D G3DSA:3.40.190.10 89 289 1.1E-54 T 11-10-2018 AMS64_18690 f5b6344fddeb06bfae63381f3d90d045 313 SUPERFAMILY SSF53850 87 290 9.05E-38 T 11-10-2018 AMS64_18690 f5b6344fddeb06bfae63381f3d90d045 313 SUPERFAMILY SSF46785 3 83 2.21E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_18690 f5b6344fddeb06bfae63381f3d90d045 313 Gene3D G3DSA:1.10.10.10 1 84 7.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_18690 f5b6344fddeb06bfae63381f3d90d045 313 Gene3D G3DSA:3.40.190.10 167 265 1.1E-54 T 11-10-2018 AMS64_18690 f5b6344fddeb06bfae63381f3d90d045 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_18690 f5b6344fddeb06bfae63381f3d90d045 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_18690 f5b6344fddeb06bfae63381f3d90d045 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_18690 f5b6344fddeb06bfae63381f3d90d045 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.0E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06635 281f1ae45efe712a001882e1585edb83 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 4.3E-90 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_06635 281f1ae45efe712a001882e1585edb83 193 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.4E-36 T 11-10-2018 AMS64_06635 281f1ae45efe712a001882e1585edb83 193 PRINTS PR00097 Anthranilate synthase component II signature 169 182 2.4E-36 T 11-10-2018 AMS64_06635 281f1ae45efe712a001882e1585edb83 193 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.4E-36 T 11-10-2018 AMS64_06635 281f1ae45efe712a001882e1585edb83 193 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.4E-36 T 11-10-2018 AMS64_06635 281f1ae45efe712a001882e1585edb83 193 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.4E-36 T 11-10-2018 AMS64_06635 281f1ae45efe712a001882e1585edb83 193 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.4E-36 T 11-10-2018 AMS64_06635 281f1ae45efe712a001882e1585edb83 193 SUPERFAMILY SSF52317 1 191 6.7E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_06635 281f1ae45efe712a001882e1585edb83 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.3E-5 T 11-10-2018 AMS64_06635 281f1ae45efe712a001882e1585edb83 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.3E-5 T 11-10-2018 AMS64_06635 281f1ae45efe712a001882e1585edb83 193 Gene3D G3DSA:3.40.50.880 1 192 2.6E-61 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_06635 281f1ae45efe712a001882e1585edb83 193 Pfam PF00117 Glutamine amidotransferase class-I 3 191 1.4E-54 T 11-10-2018 IPR017926 Glutamine amidotransferase AMS64_06635 281f1ae45efe712a001882e1585edb83 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.2E-13 T 11-10-2018 AMS64_06635 281f1ae45efe712a001882e1585edb83 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.2E-13 T 11-10-2018 AMS64_06635 281f1ae45efe712a001882e1585edb83 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.2E-13 T 11-10-2018 AMS64_12780 d043893ad6c69af21b6d92729b6b1792 246 Gene3D G3DSA:3.30.70.980 130 204 1.4E-60 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_12780 d043893ad6c69af21b6d92729b6b1792 246 Pfam PF01709 Transcriptional regulator 5 235 7.2E-97 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_12780 d043893ad6c69af21b6d92729b6b1792 246 Gene3D G3DSA:3.30.70.980 85 235 1.4E-60 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_12780 d043893ad6c69af21b6d92729b6b1792 246 Gene3D G3DSA:1.10.10.200 1 80 1.2E-33 T 11-10-2018 IPR017856 Integrase-like, N-terminal AMS64_12780 d043893ad6c69af21b6d92729b6b1792 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 6.4E-102 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_12780 d043893ad6c69af21b6d92729b6b1792 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.477 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_12780 d043893ad6c69af21b6d92729b6b1792 246 SUPERFAMILY SSF75625 3 244 7.98E-97 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_00895 3f3bffd6b790df687540752ed28be2b4 218 Pfam PF00691 OmpA family 113 208 2.5E-20 T 11-10-2018 IPR006665 OmpA-like domain AMS64_00895 3f3bffd6b790df687540752ed28be2b4 218 Gene3D G3DSA:3.30.1330.60 77 218 8.2E-49 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_00895 3f3bffd6b790df687540752ed28be2b4 218 Pfam PF13488 Glycine zipper 36 83 1.7E-9 T 11-10-2018 IPR039567 Glycine zipper domain AMS64_00895 3f3bffd6b790df687540752ed28be2b4 218 PRINTS PR01021 OMPA domain signature 114 136 2.4E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_00895 3f3bffd6b790df687540752ed28be2b4 218 PRINTS PR01021 OMPA domain signature 144 159 2.4E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_00895 3f3bffd6b790df687540752ed28be2b4 218 PRINTS PR01021 OMPA domain signature 159 175 2.4E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_00895 3f3bffd6b790df687540752ed28be2b4 218 SUPERFAMILY SSF103088 102 216 3.53E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_11865 5aec36637058143c26abf7bf6323653e 248 Gene3D G3DSA:3.40.190.10 109 205 1.3E-26 T 11-10-2018 AMS64_11865 5aec36637058143c26abf7bf6323653e 248 SMART SM00062 24 248 0.0035 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_11865 5aec36637058143c26abf7bf6323653e 248 SUPERFAMILY SSF53850 27 246 4.94E-36 T 11-10-2018 AMS64_11865 5aec36637058143c26abf7bf6323653e 248 Gene3D G3DSA:3.40.190.10 30 244 1.3E-26 T 11-10-2018 AMS64_11865 5aec36637058143c26abf7bf6323653e 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 245 9.1E-22 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 Gene3D G3DSA:3.40.190.10 27 309 4.7E-119 T 11-10-2018 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 Gene3D G3DSA:3.40.190.10 127 313 4.7E-119 T 11-10-2018 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 198 217 1.2E-86 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 44 65 1.2E-86 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 118 134 1.2E-86 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 143 157 1.2E-86 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 287 313 1.2E-86 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 71 85 1.2E-86 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 87 100 1.2E-86 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 28 44 1.2E-86 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 161 180 1.2E-86 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 242 261 1.2E-86 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 PIRSF PIRSF019574 1 342 1.8E-126 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 SUPERFAMILY SSF53850 22 329 2.22E-95 T 11-10-2018 AMS64_09415 071fa2814b6b9ba048dc698bad273009 346 Pfam PF13416 Bacterial extracellular solute-binding protein 38 308 3.4E-48 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMS64_03490 ff04d2f3815809cc0d53a3c199ebff74 411 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMS64_03490 ff04d2f3815809cc0d53a3c199ebff74 411 SUPERFAMILY SSF52402 5 168 6.52E-44 T 11-10-2018 AMS64_03490 ff04d2f3815809cc0d53a3c199ebff74 411 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 400 50.436 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMS64_03490 ff04d2f3815809cc0d53a3c199ebff74 411 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMS64_03490 ff04d2f3815809cc0d53a3c199ebff74 411 SUPERFAMILY SSF69864 174 400 6.93E-84 T 11-10-2018 AMS64_03490 ff04d2f3815809cc0d53a3c199ebff74 411 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 397 8.5E-133 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMS64_03490 ff04d2f3815809cc0d53a3c199ebff74 411 Pfam PF00764 Arginosuccinate synthase 8 394 5.5E-143 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMS64_03490 ff04d2f3815809cc0d53a3c199ebff74 411 Gene3D G3DSA:3.40.50.620 5 175 2.0E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_03490 ff04d2f3815809cc0d53a3c199ebff74 411 Gene3D G3DSA:3.90.1260.10 177 404 2.5E-83 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMS64_10030 e098427c5d7f62b53a46ef895fb480f2 483 Pfam PF13519 von Willebrand factor type A domain 82 184 4.5E-12 T 11-10-2018 IPR002035 von Willebrand factor, type A AMS64_10030 e098427c5d7f62b53a46ef895fb480f2 483 SUPERFAMILY SSF53300 82 193 2.22E-13 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_10030 e098427c5d7f62b53a46ef895fb480f2 483 SUPERFAMILY SSF48452 336 425 2.9E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_10030 e098427c5d7f62b53a46ef895fb480f2 483 SMART SM00028 382 415 5.7E-7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_10030 e098427c5d7f62b53a46ef895fb480f2 483 Gene3D G3DSA:1.25.40.10 323 430 1.2E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_10030 e098427c5d7f62b53a46ef895fb480f2 483 Gene3D G3DSA:3.40.50.410 80 269 7.2E-19 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_10030 e098427c5d7f62b53a46ef895fb480f2 483 Pfam PF00515 Tetratricopeptide repeat 382 414 1.1E-7 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 AMS64_15555 4a39b79f9fcecbcf1c3b6019e7d5476f 374 Pfam PF10758 Protein of unknown function (DUF2586) 2 366 2.7E-162 T 11-10-2018 IPR019694 Bacteriophage HP1, Orf23 AMS64_22085 4a39b79f9fcecbcf1c3b6019e7d5476f 374 Pfam PF10758 Protein of unknown function (DUF2586) 2 366 2.7E-162 T 11-10-2018 IPR019694 Bacteriophage HP1, Orf23 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 597 619 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 SUPERFAMILY SSF51998 220 738 1.07E-167 T 11-10-2018 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 SUPERFAMILY SSF48168 8 219 1.15E-75 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 Pfam PF03477 ATP cone domain 4 90 1.9E-15 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 PRINTS PR01183 Ribonucleotide reductase large chain signature 296 315 9.1E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 PRINTS PR01183 Ribonucleotide reductase large chain signature 509 531 9.1E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 PRINTS PR01183 Ribonucleotide reductase large chain signature 431 442 9.1E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 PRINTS PR01183 Ribonucleotide reductase large chain signature 471 494 9.1E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 PRINTS PR01183 Ribonucleotide reductase large chain signature 608 635 9.1E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 PRINTS PR01183 Ribonucleotide reductase large chain signature 537 560 9.1E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 143 733 8.4E-177 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 Gene3D G3DSA:3.20.70.20 76 739 9.4E-157 T 11-10-2018 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 Pfam PF02867 Ribonucleotide reductase, barrel domain 674 729 2.5E-7 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 Pfam PF02867 Ribonucleotide reductase, barrel domain 221 661 2.5E-111 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09275 8751767b2fcafca801581421b836f2ca 755 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 140 217 4.1E-15 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_05485 d2cf7185f0111195612aa516e804d7b7 223 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AMS64_05485 d2cf7185f0111195612aa516e804d7b7 223 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 6.4E-74 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AMS64_05485 d2cf7185f0111195612aa516e804d7b7 223 Pfam PF14622 Ribonuclease-III-like 19 141 6.2E-33 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AMS64_05485 d2cf7185f0111195612aa516e804d7b7 223 Gene3D G3DSA:1.10.1520.10 1 146 5.4E-42 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AMS64_05485 d2cf7185f0111195612aa516e804d7b7 223 Pfam PF00035 Double-stranded RNA binding motif 155 222 1.6E-13 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AMS64_05485 d2cf7185f0111195612aa516e804d7b7 223 SUPERFAMILY SSF54768 108 222 2.15E-25 T 11-10-2018 AMS64_05485 d2cf7185f0111195612aa516e804d7b7 223 SUPERFAMILY SSF69065 3 158 1.92E-49 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AMS64_05485 d2cf7185f0111195612aa516e804d7b7 223 SMART SM00535 20 148 2.5E-55 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AMS64_05485 d2cf7185f0111195612aa516e804d7b7 223 SMART SM00358 155 223 1.1E-20 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AMS64_05485 d2cf7185f0111195612aa516e804d7b7 223 Gene3D G3DSA:3.30.160.20 153 223 2.3E-19 T 11-10-2018 AMS64_05485 d2cf7185f0111195612aa516e804d7b7 223 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.861 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AMS64_04805 918dc0dd081d61010361e888fe68ae88 247 Gene3D G3DSA:2.40.50.580 1 80 2.0E-28 T 11-10-2018 AMS64_04805 918dc0dd081d61010361e888fe68ae88 247 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 57.229 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein AMS64_04805 918dc0dd081d61010361e888fe68ae88 247 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 227 3.8E-72 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein AMS64_04805 918dc0dd081d61010361e888fe68ae88 247 Gene3D G3DSA:3.40.1350.60 81 237 2.4E-52 T 11-10-2018 AMS64_04805 918dc0dd081d61010361e888fe68ae88 247 Pfam PF03749 Sugar fermentation stimulation protein 13 228 1.1E-72 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein AMS64_02930 c027c5850bd247375b6be2429395602c 405 Gene3D G3DSA:1.20.810.10 1 405 1.4E-151 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 AMS64_02930 c027c5850bd247375b6be2429395602c 405 SUPERFAMILY SSF81648 201 370 3.14E-47 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AMS64_02930 c027c5850bd247375b6be2429395602c 405 Pfam PF00033 Cytochrome b/b6/petB 25 212 8.2E-67 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AMS64_02930 c027c5850bd247375b6be2429395602c 405 SUPERFAMILY SSF81342 8 269 1.88E-95 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMS64_02930 c027c5850bd247375b6be2429395602c 405 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 279 380 1.5E-41 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AMS64_02930 c027c5850bd247375b6be2429395602c 405 PIRSF PIRSF038885 1 405 2.7E-157 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AMS64_15825 5538e446cd7b48a20a65db632966b44d 106 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 95 3.3E-17 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AMS64_15825 5538e446cd7b48a20a65db632966b44d 106 SUPERFAMILY SSF101498 1 98 3.79E-18 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily AMS64_15825 5538e446cd7b48a20a65db632966b44d 106 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 98 7.5E-22 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 SUPERFAMILY SSF52440 1 127 9.35E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 SUPERFAMILY SSF56059 128 401 3.01E-109 T 11-10-2018 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:1.10.1030.10 404 553 9.6E-52 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:3.40.50.1380 936 1072 4.2E-35 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 Pfam PF02142 MGS-like domain 956 1041 9.0E-17 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:3.30.470.20 665 935 7.3E-124 T 11-10-2018 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 SUPERFAMILY SSF52440 557 675 7.63E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:3.40.50.20 554 662 9.7E-50 T 11-10-2018 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.8E-40 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.455 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:3.30.470.20 119 403 5.4E-129 T 11-10-2018 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 SUPERFAMILY SSF52335 937 1071 5.49E-36 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.3E-71 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 2.2E-36 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:3.40.50.20 1 116 2.4E-50 T 11-10-2018 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 SMART SM01096 424 547 9.7E-76 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 SMART SM00851 955 1041 2.7E-29 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 SUPERFAMILY SSF48108 397 554 3.92E-53 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 SUPERFAMILY SSF56059 673 933 5.3E-104 T 11-10-2018 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.178 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_12655 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_15880 e413c471c3fd0fc1d016a94faee5493d 248 SUPERFAMILY SSF100950 69 227 8.37E-25 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AMS64_15880 e413c471c3fd0fc1d016a94faee5493d 248 SUPERFAMILY SSF46785 1 67 3.3E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_15880 e413c471c3fd0fc1d016a94faee5493d 248 Pfam PF00455 DeoR C terminal sensor domain 70 225 2.1E-40 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AMS64_15880 e413c471c3fd0fc1d016a94faee5493d 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 1.4E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_15880 e413c471c3fd0fc1d016a94faee5493d 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 1.4E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_15880 e413c471c3fd0fc1d016a94faee5493d 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMS64_15880 e413c471c3fd0fc1d016a94faee5493d 248 Pfam PF08220 DeoR-like helix-turn-helix domain 4 58 1.0E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_15880 e413c471c3fd0fc1d016a94faee5493d 248 Gene3D G3DSA:1.10.10.10 10 110 5.9E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_15880 e413c471c3fd0fc1d016a94faee5493d 248 SMART SM00420 4 56 3.0E-18 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_15880 e413c471c3fd0fc1d016a94faee5493d 248 SMART SM01134 67 227 2.1E-51 T 11-10-2018 AMS64_11715 435f08da242d490655fc3fec13069262 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 368 2.7E-175 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMS64_11715 435f08da242d490655fc3fec13069262 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 2.2E-184 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMS64_11715 435f08da242d490655fc3fec13069262 378 SUPERFAMILY SSF51713 1 364 5.23E-161 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMS64_11715 435f08da242d490655fc3fec13069262 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 56.648 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMS64_11715 435f08da242d490655fc3fec13069262 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 2.2E-91 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMS64_11715 435f08da242d490655fc3fec13069262 378 Gene3D G3DSA:3.20.20.105 1 367 5.3E-170 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 Pfam PF00381 PTS HPr component phosphorylation site 276 357 1.9E-25 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 SUPERFAMILY SSF55804 154 250 2.79E-6 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 315 330 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 286 293 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 275 357 1.1E-20 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 SUPERFAMILY SSF55804 5 141 2.75E-37 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 Gene3D G3DSA:3.30.1340.10 275 361 1.5E-26 T 11-10-2018 IPR035895 HPr-like superfamily AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 Gene3D G3DSA:3.40.930.10 1 142 4.0E-40 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 SUPERFAMILY SSF55594 276 364 7.2E-24 T 11-10-2018 IPR035895 HPr-like superfamily AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 PRINTS PR00107 Phosphocarrier protein signature 286 302 2.4E-16 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 PRINTS PR00107 Phosphocarrier protein signature 314 329 2.4E-16 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 PRINTS PR00107 Phosphocarrier protein signature 329 346 2.4E-16 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_09870 b84fbfe4af6cf9dbdfb2c617567a3840 366 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 140 5.2E-30 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMS64_13510 15d318c54f7414fa817472bf227652f2 331 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 331 37.927 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_13510 15d318c54f7414fa817472bf227652f2 331 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 331 2.3E-103 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_13510 15d318c54f7414fa817472bf227652f2 331 SUPERFAMILY SSF102114 3 283 3.4E-73 T 11-10-2018 AMS64_13510 15d318c54f7414fa817472bf227652f2 331 SMART SM00729 13 221 9.8E-7 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMS64_13510 15d318c54f7414fa817472bf227652f2 331 Pfam PF13353 4Fe-4S single cluster domain 22 127 1.0E-7 T 11-10-2018 AMS64_13510 15d318c54f7414fa817472bf227652f2 331 Pfam PF06463 Molybdenum Cofactor Synthesis C 188 314 7.1E-37 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_13510 15d318c54f7414fa817472bf227652f2 331 Pfam PF04055 Radical SAM superfamily 18 182 2.9E-31 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_13510 15d318c54f7414fa817472bf227652f2 331 Gene3D G3DSA:3.20.20.70 2 331 2.0E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_13510 15d318c54f7414fa817472bf227652f2 331 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_17225 67b3f08f556d10e993c47821b79629e2 501 SUPERFAMILY SSF52540 110 498 3.64E-106 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_17225 67b3f08f556d10e993c47821b79629e2 501 Pfam PF00437 Type II/IV secretion system protein 127 393 1.2E-93 T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_17225 67b3f08f556d10e993c47821b79629e2 501 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 17 498 6.5E-213 T 11-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AMS64_17225 67b3f08f556d10e993c47821b79629e2 501 Gene3D G3DSA:3.40.50.300 227 501 9.1E-119 T 11-10-2018 AMS64_17225 67b3f08f556d10e993c47821b79629e2 501 Gene3D G3DSA:3.30.300.160 10 93 1.2E-21 T 11-10-2018 AMS64_17225 67b3f08f556d10e993c47821b79629e2 501 SMART SM00382 254 380 2.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_17225 67b3f08f556d10e993c47821b79629e2 501 Gene3D G3DSA:3.30.450.90 94 226 1.1E-53 T 11-10-2018 AMS64_17225 67b3f08f556d10e993c47821b79629e2 501 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 321 335 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_17225 67b3f08f556d10e993c47821b79629e2 501 SUPERFAMILY SSF160246 16 80 1.02E-15 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AMS64_00215 c102fb01380872781689dcaf9c721b35 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_00215 c102fb01380872781689dcaf9c721b35 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_00215 c102fb01380872781689dcaf9c721b35 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_00215 c102fb01380872781689dcaf9c721b35 319 Pfam PF03466 LysR substrate binding domain 97 298 2.0E-19 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_00215 c102fb01380872781689dcaf9c721b35 319 SUPERFAMILY SSF53850 92 299 4.71E-31 T 11-10-2018 AMS64_00215 c102fb01380872781689dcaf9c721b35 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_00215 c102fb01380872781689dcaf9c721b35 319 SUPERFAMILY SSF46785 6 88 4.54E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_00215 c102fb01380872781689dcaf9c721b35 319 Gene3D G3DSA:1.10.10.10 1 91 9.6E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_00215 c102fb01380872781689dcaf9c721b35 319 Gene3D G3DSA:3.40.190.10 92 291 4.9E-41 T 11-10-2018 AMS64_00215 c102fb01380872781689dcaf9c721b35 319 Gene3D G3DSA:3.40.190.10 175 272 4.9E-41 T 11-10-2018 AMS64_19095 ee4c1fdc40428eaba3f9900a9eb78070 851 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 163 1.2E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMS64_19095 ee4c1fdc40428eaba3f9900a9eb78070 851 Pfam PF00593 TonB dependent receptor 359 845 2.3E-46 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMS64_19095 ee4c1fdc40428eaba3f9900a9eb78070 851 Gene3D G3DSA:2.170.130.10 32 167 1.7E-33 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMS64_19095 ee4c1fdc40428eaba3f9900a9eb78070 851 SUPERFAMILY SSF56935 30 851 1.39E-92 T 11-10-2018 AMS64_17485 889512804a948c86f8241bca303cc3d9 160 Pfam PF00293 NUDIX domain 29 143 8.2E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_17485 889512804a948c86f8241bca303cc3d9 160 SUPERFAMILY SSF55811 2 158 3.38E-33 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_17485 889512804a948c86f8241bca303cc3d9 160 PIRSF PIRSF017340 1 160 1.1E-52 T 11-10-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 AMS64_17485 889512804a948c86f8241bca303cc3d9 160 Gene3D G3DSA:3.90.79.10 1 160 5.4E-49 T 11-10-2018 AMS64_19505 7afbff37cfb8f22c031dc2f00ce17a91 328 Pfam PF11059 Protein of unknown function (DUF2860) 29 327 2.6E-79 T 11-10-2018 IPR016896 Protein of unknown function DUF2860 AMS64_19505 7afbff37cfb8f22c031dc2f00ce17a91 328 PIRSF PIRSF028696 1 328 7.8E-86 T 11-10-2018 IPR016896 Protein of unknown function DUF2860 AMS64_19855 6f9b85e440f095027a1e06fc3cf03224 530 Gene3D G3DSA:3.40.140.20 394 530 7.1E-60 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMS64_19855 6f9b85e440f095027a1e06fc3cf03224 530 SMART SM00851 19 132 1.9E-62 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AMS64_19855 6f9b85e440f095027a1e06fc3cf03224 530 SUPERFAMILY SSF53927 222 530 3.41E-129 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMS64_19855 6f9b85e440f095027a1e06fc3cf03224 530 PIRSF PIRSF000414 1 530 4.1E-225 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMS64_19855 6f9b85e440f095027a1e06fc3cf03224 530 Gene3D G3DSA:3.40.140.20 220 373 4.3E-56 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMS64_19855 6f9b85e440f095027a1e06fc3cf03224 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.157 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMS64_19855 6f9b85e440f095027a1e06fc3cf03224 530 Pfam PF02142 MGS-like domain 19 132 3.6E-30 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AMS64_19855 6f9b85e440f095027a1e06fc3cf03224 530 SMART SM00798 137 462 2.2E-215 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMS64_19855 6f9b85e440f095027a1e06fc3cf03224 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 5.2E-117 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMS64_19855 6f9b85e440f095027a1e06fc3cf03224 530 SUPERFAMILY SSF52335 7 197 5.23E-71 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMS64_19855 6f9b85e440f095027a1e06fc3cf03224 530 Gene3D G3DSA:3.40.50.1380 1 200 5.4E-86 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMS64_19855 6f9b85e440f095027a1e06fc3cf03224 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 1.2E-254 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 22 463 4.7E-64 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 Gene3D G3DSA:3.40.1160.10 22 305 1.3E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 475 607 2.0E-10 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 Gene3D G3DSA:3.30.2130.10 314 473 1.1E-5 T 11-10-2018 AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 Pfam PF00742 Homoserine dehydrogenase 616 811 4.6E-44 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 SUPERFAMILY SSF53633 19 306 4.45E-61 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 Gene3D G3DSA:1.20.120.1320 59 153 1.3E-73 T 11-10-2018 AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 Gene3D G3DSA:3.40.50.720 474 814 2.4E-103 T 11-10-2018 AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 PIRSF PIRSF000727 20 818 1.6E-243 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 Gene3D G3DSA:3.30.360.10 627 797 2.4E-103 T 11-10-2018 AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 Pfam PF00696 Amino acid kinase family 20 289 2.6E-42 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 SUPERFAMILY SSF55347 616 799 3.4E-45 T 11-10-2018 AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 SUPERFAMILY SSF51735 468 638 1.77E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 ProSitePatterns PS00324 Aspartokinase signature. 22 30 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_20725 623af64cef0108f4e12bd9830a3e64a2 818 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 662 684 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AMS64_00025 6c7ea07adda52e34482d44b6d580fef2 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 223 6.5E-12 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMS64_00025 6c7ea07adda52e34482d44b6d580fef2 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 237 2.9E-114 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AMS64_00025 6c7ea07adda52e34482d44b6d580fef2 238 SUPERFAMILY SSF55666 154 237 8.9E-26 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMS64_00025 6c7ea07adda52e34482d44b6d580fef2 238 SUPERFAMILY SSF54211 3 182 2.08E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_00025 6c7ea07adda52e34482d44b6d580fef2 238 Gene3D G3DSA:3.30.230.70 10 238 2.8E-65 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMS64_00025 6c7ea07adda52e34482d44b6d580fef2 238 Hamap MF_00564 Ribonuclease PH [rph]. 12 238 44.566 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AMS64_00025 6c7ea07adda52e34482d44b6d580fef2 238 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site AMS64_00025 6c7ea07adda52e34482d44b6d580fef2 238 Pfam PF01138 3' exoribonuclease family, domain 1 11 141 9.0E-25 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMS64_01425 df5c68b7ed4a33bd627c406dcf32f5a6 273 Gene3D G3DSA:1.10.10.60 223 271 1.7E-12 T 11-10-2018 AMS64_01425 df5c68b7ed4a33bd627c406dcf32f5a6 273 SUPERFAMILY SSF46689 162 213 4.3E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_01425 df5c68b7ed4a33bd627c406dcf32f5a6 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 216 257 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_01425 df5c68b7ed4a33bd627c406dcf32f5a6 273 Pfam PF02311 AraC-like ligand binding domain 17 147 1.2E-16 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMS64_01425 df5c68b7ed4a33bd627c406dcf32f5a6 273 SUPERFAMILY SSF51215 25 151 3.53E-17 T 11-10-2018 IPR037923 Transcription regulator HTH-like AMS64_01425 df5c68b7ed4a33bd627c406dcf32f5a6 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 6.2E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_01425 df5c68b7ed4a33bd627c406dcf32f5a6 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 6.2E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_01425 df5c68b7ed4a33bd627c406dcf32f5a6 273 SUPERFAMILY SSF46689 215 265 3.72E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_01425 df5c68b7ed4a33bd627c406dcf32f5a6 273 Pfam PF12833 Helix-turn-helix domain 185 262 1.9E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_01425 df5c68b7ed4a33bd627c406dcf32f5a6 273 Gene3D G3DSA:1.10.10.60 166 222 1.7E-13 T 11-10-2018 AMS64_01425 df5c68b7ed4a33bd627c406dcf32f5a6 273 SMART SM00342 179 261 1.8E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_22480 e929f70e37854f14a7921528b5f432f4 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 1.3E-260 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMS64_22480 e929f70e37854f14a7921528b5f432f4 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMS64_22480 e929f70e37854f14a7921528b5f432f4 613 Pfam PF00920 Dehydratase family 34 604 2.9E-219 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMS64_22480 e929f70e37854f14a7921528b5f432f4 613 SUPERFAMILY SSF143975 3 420 1.29E-136 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMS64_22480 e929f70e37854f14a7921528b5f432f4 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMS64_22480 e929f70e37854f14a7921528b5f432f4 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.225 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMS64_22480 e929f70e37854f14a7921528b5f432f4 613 Gene3D G3DSA:3.50.30.80 421 572 1.5E-54 T 11-10-2018 AMS64_22480 e929f70e37854f14a7921528b5f432f4 613 SUPERFAMILY SSF52016 421 608 3.53E-59 T 11-10-2018 AMS64_15040 557746414f744edfd98c469ef2f22de0 380 PIRSF PIRSF000390 1 379 6.2E-105 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMS64_15040 557746414f744edfd98c469ef2f22de0 380 SUPERFAMILY SSF53383 2 378 2.36E-108 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_15040 557746414f744edfd98c469ef2f22de0 380 Gene3D G3DSA:3.90.1150.10 260 378 6.1E-34 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_15040 557746414f744edfd98c469ef2f22de0 380 Gene3D G3DSA:3.40.640.10 1 259 2.2E-92 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_15040 557746414f744edfd98c469ef2f22de0 380 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 374 3.0E-109 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMS64_15040 557746414f744edfd98c469ef2f22de0 380 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 377 1.4E-158 T 11-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase AMS64_14815 fe101b7bf60827f6135ed68fd52cf627 616 Pfam PF00884 Sulfatase 260 529 2.5E-27 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AMS64_14815 fe101b7bf60827f6135ed68fd52cf627 616 Gene3D G3DSA:3.40.720.10 251 562 5.9E-47 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMS64_14815 fe101b7bf60827f6135ed68fd52cf627 616 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 2.7E-100 T 11-10-2018 IPR024588 Inner membrane protein YejM, N-terminal AMS64_14815 fe101b7bf60827f6135ed68fd52cf627 616 SUPERFAMILY SSF53649 260 588 6.54E-49 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMS64_14815 fe101b7bf60827f6135ed68fd52cf627 616 PIRSF PIRSF004950 6 615 1.6E-204 T 11-10-2018 IPR012159 Inner membrane protein YejM AMS64_15415 e315d5c07e7efc2a28541077933fdd77 549 Gene3D G3DSA:1.10.3720.10 282 543 1.7E-29 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_15415 e315d5c07e7efc2a28541077933fdd77 549 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 274 541 4.5E-75 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AMS64_15415 e315d5c07e7efc2a28541077933fdd77 549 SUPERFAMILY SSF161098 262 531 5.63E-35 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_15415 e315d5c07e7efc2a28541077933fdd77 549 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 317 544 1.3E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_20045 11d404b87f3c32fccd023d7c6c1c65da 90 SMART SM00411 1 90 5.3E-42 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_20045 11d404b87f3c32fccd023d7c6c1c65da 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMS64_20045 11d404b87f3c32fccd023d7c6c1c65da 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.1E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_20045 11d404b87f3c32fccd023d7c6c1c65da 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.1E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_20045 11d404b87f3c32fccd023d7c6c1c65da 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.1E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_20045 11d404b87f3c32fccd023d7c6c1c65da 90 SUPERFAMILY SSF47729 1 90 2.65E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMS64_20045 11d404b87f3c32fccd023d7c6c1c65da 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-32 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_20045 11d404b87f3c32fccd023d7c6c1c65da 90 Gene3D G3DSA:4.10.520.10 1 90 7.3E-37 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMS64_11455 803d814a51b98eecfdf2ab584d4e4a16 450 Pfam PF00696 Amino acid kinase family 5 278 4.1E-47 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMS64_11455 803d814a51b98eecfdf2ab584d4e4a16 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 4 448 5.7E-130 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_11455 803d814a51b98eecfdf2ab584d4e4a16 450 Gene3D G3DSA:3.30.70.260 304 448 1.4E-50 T 11-10-2018 AMS64_11455 803d814a51b98eecfdf2ab584d4e4a16 450 SUPERFAMILY SSF55021 297 395 1.21E-18 T 11-10-2018 AMS64_11455 803d814a51b98eecfdf2ab584d4e4a16 450 Gene3D G3DSA:3.40.1160.10 6 290 2.1E-97 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_11455 803d814a51b98eecfdf2ab584d4e4a16 450 Gene3D G3DSA:1.20.120.1320 42 135 2.1E-97 T 11-10-2018 AMS64_11455 803d814a51b98eecfdf2ab584d4e4a16 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_11455 803d814a51b98eecfdf2ab584d4e4a16 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 1.7E-122 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_11455 803d814a51b98eecfdf2ab584d4e4a16 450 SUPERFAMILY SSF55021 377 448 3.43E-14 T 11-10-2018 AMS64_11455 803d814a51b98eecfdf2ab584d4e4a16 450 Gene3D G3DSA:3.30.70.260 310 384 1.4E-50 T 11-10-2018 AMS64_11455 803d814a51b98eecfdf2ab584d4e4a16 450 PIRSF PIRSF000726 2 450 9.6E-130 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_11455 803d814a51b98eecfdf2ab584d4e4a16 450 SUPERFAMILY SSF53633 5 292 7.85E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_04145 cfd71e6dfb36aa78ef347c3002c4eff4 258 Gene3D G3DSA:3.40.50.300 1 232 8.1E-59 T 11-10-2018 AMS64_04145 cfd71e6dfb36aa78ef347c3002c4eff4 258 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_04145 cfd71e6dfb36aa78ef347c3002c4eff4 258 SMART SM00382 29 196 1.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_04145 cfd71e6dfb36aa78ef347c3002c4eff4 258 SUPERFAMILY SSF52540 3 214 5.7E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_04145 cfd71e6dfb36aa78ef347c3002c4eff4 258 Pfam PF00005 ABC transporter 20 147 9.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_08950 523b837c1a439e61812f4c3769521bdd 474 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 454 1.4E-177 T 11-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 AMS64_08950 523b837c1a439e61812f4c3769521bdd 474 SUPERFAMILY SSF51338 353 458 5.67E-37 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_08950 523b837c1a439e61812f4c3769521bdd 474 SUPERFAMILY SSF51338 1 64 2.9E-15 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_08950 523b837c1a439e61812f4c3769521bdd 474 Gene3D G3DSA:3.20.20.140 54 423 1.1E-162 T 11-10-2018 AMS64_08950 523b837c1a439e61812f4c3769521bdd 474 Pfam PF01979 Amidohydrolase family 50 436 1.5E-24 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMS64_08950 523b837c1a439e61812f4c3769521bdd 474 SUPERFAMILY SSF51556 54 382 1.25E-94 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_08950 523b837c1a439e61812f4c3769521bdd 474 Gene3D G3DSA:2.30.40.10 4 456 1.1E-162 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_20135 adcd5e5c60b440160f5b55427de7ecc6 112 SUPERFAMILY SSF54913 1 112 6.35E-47 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMS64_20135 adcd5e5c60b440160f5b55427de7ecc6 112 PIRSF PIRSF039144 1 112 1.6E-57 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20135 adcd5e5c60b440160f5b55427de7ecc6 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMS64_20135 adcd5e5c60b440160f5b55427de7ecc6 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AMS64_20135 adcd5e5c60b440160f5b55427de7ecc6 112 SMART SM00938 4 105 1.5E-69 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20135 adcd5e5c60b440160f5b55427de7ecc6 112 PRINTS PR00340 P-II protein signature 23 41 3.7E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20135 adcd5e5c60b440160f5b55427de7ecc6 112 PRINTS PR00340 P-II protein signature 83 103 3.7E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20135 adcd5e5c60b440160f5b55427de7ecc6 112 PRINTS PR00340 P-II protein signature 2 17 3.7E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20135 adcd5e5c60b440160f5b55427de7ecc6 112 PRINTS PR00340 P-II protein signature 52 75 3.7E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20135 adcd5e5c60b440160f5b55427de7ecc6 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.3E-45 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20135 adcd5e5c60b440160f5b55427de7ecc6 112 Gene3D G3DSA:3.30.70.120 1 112 1.6E-49 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMS64_03760 d994a3c8fcbaef7b344554f44cebf8e8 655 Pfam PF00593 TonB dependent receptor 194 648 1.0E-38 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMS64_03760 d994a3c8fcbaef7b344554f44cebf8e8 655 SUPERFAMILY SSF56935 31 649 2.88E-85 T 11-10-2018 AMS64_03760 d994a3c8fcbaef7b344554f44cebf8e8 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 143 1.1E-7 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMS64_03760 d994a3c8fcbaef7b344554f44cebf8e8 655 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 47 649 6.9E-169 T 11-10-2018 IPR010100 TonB-dependent copper receptor AMS64_03760 d994a3c8fcbaef7b344554f44cebf8e8 655 Gene3D G3DSA:2.170.130.10 55 151 1.5E-8 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMS64_03760 d994a3c8fcbaef7b344554f44cebf8e8 655 Gene3D G3DSA:2.40.170.20 158 649 1.4E-64 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMS64_04110 383f5766cde3dde37c9e73073b89434e 114 Gene3D G3DSA:3.40.1440.10 13 107 5.2E-26 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMS64_04110 383f5766cde3dde37c9e73073b89434e 114 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 16 111 28.761 T 11-10-2018 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease AMS64_04110 383f5766cde3dde37c9e73073b89434e 114 Pfam PF01541 GIY-YIG catalytic domain 19 88 1.0E-11 T 11-10-2018 IPR000305 GIY-YIG endonuclease AMS64_04110 383f5766cde3dde37c9e73073b89434e 114 SUPERFAMILY SSF82771 18 89 8.37E-11 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 7 49 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 SMART SM00342 20 103 3.7E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 Gene3D G3DSA:1.10.10.60 4 61 7.3E-14 T 11-10-2018 AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 2.0E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 2.0E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 Gene3D G3DSA:3.20.80.10 134 283 4.3E-29 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 Gene3D G3DSA:1.10.10.60 62 112 3.0E-14 T 11-10-2018 AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 57 99 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 Pfam PF12833 Helix-turn-helix domain 27 105 1.3E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 SMART SM00871 134 283 5.8E-19 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 SUPERFAMILY SSF55136 137 276 3.49E-24 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 SUPERFAMILY SSF46689 6 53 4.39E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 SUPERFAMILY SSF46689 56 106 4.48E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_02325 77b71cfdc7e3a4b6e2e3f6c0ac64d96b 284 Pfam PF06445 GyrI-like small molecule binding domain 136 269 2.2E-18 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain AMS64_15440 2e5c024e31a577056c406f4c2bea615a 437 Pfam PF00463 Isocitrate lyase family 11 257 1.7E-60 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMS64_15440 2e5c024e31a577056c406f4c2bea615a 437 Pfam PF00463 Isocitrate lyase family 258 436 5.0E-50 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMS64_15440 2e5c024e31a577056c406f4c2bea615a 437 PIRSF PIRSF001362 1 437 7.6E-225 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMS64_15440 2e5c024e31a577056c406f4c2bea615a 437 Gene3D G3DSA:3.20.20.60 1 419 3.5E-180 T 11-10-2018 AMS64_15440 2e5c024e31a577056c406f4c2bea615a 437 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AMS64_15440 2e5c024e31a577056c406f4c2bea615a 437 SUPERFAMILY SSF51621 7 436 1.97E-152 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMS64_15440 2e5c024e31a577056c406f4c2bea615a 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 1.5E-88 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMS64_15440 2e5c024e31a577056c406f4c2bea615a 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 257 6.5E-112 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMS64_01535 09b8bf7b1555c3e4cc69dc745172a493 442 SUPERFAMILY SSF52540 3 440 4.94E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01535 09b8bf7b1555c3e4cc69dc745172a493 442 SMART SM01086 334 430 6.1E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMS64_01535 09b8bf7b1555c3e4cc69dc745172a493 442 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 334 404 3.5E-6 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMS64_01535 09b8bf7b1555c3e4cc69dc745172a493 442 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 442 43.356 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMS64_01535 09b8bf7b1555c3e4cc69dc745172a493 442 Gene3D G3DSA:1.10.8.60 334 439 1.9E-41 T 11-10-2018 AMS64_01535 09b8bf7b1555c3e4cc69dc745172a493 442 SMART SM00382 49 331 4.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_01535 09b8bf7b1555c3e4cc69dc745172a493 442 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 137 1.1E-7 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_01535 09b8bf7b1555c3e4cc69dc745172a493 442 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 442 2.2E-226 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMS64_01535 09b8bf7b1555c3e4cc69dc745172a493 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 328 1.1E-40 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_07300 227ae0392a8f5908f9bde3ea1c12b804 274 PRINTS PR01003 Flagellar assembly protein FliH signature 110 128 1.5E-12 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMS64_07300 227ae0392a8f5908f9bde3ea1c12b804 274 PRINTS PR01003 Flagellar assembly protein FliH signature 219 235 1.5E-12 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMS64_07300 227ae0392a8f5908f9bde3ea1c12b804 274 PRINTS PR01003 Flagellar assembly protein FliH signature 149 166 1.5E-12 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMS64_07300 227ae0392a8f5908f9bde3ea1c12b804 274 PRINTS PR01003 Flagellar assembly protein FliH signature 129 148 1.5E-12 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMS64_07300 227ae0392a8f5908f9bde3ea1c12b804 274 PRINTS PR01003 Flagellar assembly protein FliH signature 87 109 1.5E-12 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMS64_07300 227ae0392a8f5908f9bde3ea1c12b804 274 Pfam PF02108 Flagellar assembly protein FliH 127 254 7.8E-33 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AMS64_14505 37aa3ad18321e569072df9aae948932f 601 Gene3D G3DSA:3.30.460.80 7 158 7.6E-31 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14505 37aa3ad18321e569072df9aae948932f 601 SUPERFAMILY SSF143243 26 230 5.62E-57 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14505 37aa3ad18321e569072df9aae948932f 601 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 330 601 2.9E-105 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14505 37aa3ad18321e569072df9aae948932f 601 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 212 601 42.662 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14505 37aa3ad18321e569072df9aae948932f 601 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 17 601 69.97 T 11-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 AMS64_14505 37aa3ad18321e569072df9aae948932f 601 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 50 177 2.6E-38 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14505 37aa3ad18321e569072df9aae948932f 601 SUPERFAMILY SSF56762 226 601 8.24E-122 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14505 37aa3ad18321e569072df9aae948932f 601 Gene3D G3DSA:1.10.645.20 215 601 9.7E-147 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14505 37aa3ad18321e569072df9aae948932f 601 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 216 601 3.3E-170 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14505 37aa3ad18321e569072df9aae948932f 601 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 52 178 6.5E-39 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14505 37aa3ad18321e569072df9aae948932f 601 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 253 264 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14505 37aa3ad18321e569072df9aae948932f 601 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 106 161 1.0E-26 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 SUPERFAMILY SSF55021 330 404 2.41E-23 T 11-10-2018 AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 62 401 5.4E-116 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 Pfam PF13840 ACT domain 339 397 3.3E-14 T 11-10-2018 IPR027795 CASTOR, ACT domain AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 Gene3D G3DSA:3.30.2130.10 249 410 7.0E-57 T 11-10-2018 AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 Pfam PF01842 ACT domain 266 322 2.8E-10 T 11-10-2018 IPR002912 ACT domain AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 Gene3D G3DSA:3.40.1160.10 1 248 1.5E-87 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 401 8.6E-126 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 PIRSF PIRSF000726 1 62 5.5E-21 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 PIRSF PIRSF000726 60 409 1.7E-134 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 SUPERFAMILY SSF53633 4 241 4.97E-74 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 SUPERFAMILY SSF55021 247 325 6.47E-17 T 11-10-2018 AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 6.0E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 6.0E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMS64_03585 76aa6788a882b076c0c542ae88c9a5fb 412 Pfam PF00696 Amino acid kinase family 4 229 4.9E-50 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMS64_08270 1fe3c823bf9c98d6c078ebce26376bc2 396 SUPERFAMILY SSF52777 167 395 4.89E-91 T 11-10-2018 AMS64_08270 1fe3c823bf9c98d6c078ebce26376bc2 396 Pfam PF00364 Biotin-requiring enzyme 4 76 7.9E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMS64_08270 1fe3c823bf9c98d6c078ebce26376bc2 396 Pfam PF02817 e3 binding domain 102 135 1.6E-13 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AMS64_08270 1fe3c823bf9c98d6c078ebce26376bc2 396 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 166 394 4.2E-82 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMS64_08270 1fe3c823bf9c98d6c078ebce26376bc2 396 Gene3D G3DSA:2.40.50.100 1 96 2.8E-23 T 11-10-2018 AMS64_08270 1fe3c823bf9c98d6c078ebce26376bc2 396 Gene3D G3DSA:3.30.559.10 164 396 7.7E-99 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMS64_08270 1fe3c823bf9c98d6c078ebce26376bc2 396 SUPERFAMILY SSF51230 1 93 4.32E-25 T 11-10-2018 IPR011053 Single hybrid motif AMS64_08270 1fe3c823bf9c98d6c078ebce26376bc2 396 SUPERFAMILY SSF47005 96 139 2.09E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMS64_08270 1fe3c823bf9c98d6c078ebce26376bc2 396 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 396 1.8E-181 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AMS64_08270 1fe3c823bf9c98d6c078ebce26376bc2 396 Gene3D G3DSA:4.10.320.10 97 140 5.8E-17 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMS64_08270 1fe3c823bf9c98d6c078ebce26376bc2 396 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMS64_08150 8f873666caac276ea598807f6af93039 65 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 9.0E-20 T 11-10-2018 IPR025346 Protein of unknown function DUF4250 AMS64_08180 65726220629bff4fe200fe5800bed321 583 SUPERFAMILY SSF90123 6 321 1.7E-70 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_08180 65726220629bff4fe200fe5800bed321 583 Pfam PF00005 ABC transporter 353 502 1.4E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_08180 65726220629bff4fe200fe5800bed321 583 Gene3D G3DSA:1.20.1560.10 1 327 2.5E-76 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_08180 65726220629bff4fe200fe5800bed321 583 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_08180 65726220629bff4fe200fe5800bed321 583 Pfam PF00664 ABC transporter transmembrane region 21 294 2.4E-39 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMS64_08180 65726220629bff4fe200fe5800bed321 583 Gene3D G3DSA:3.40.50.300 333 581 3.1E-84 T 11-10-2018 AMS64_08180 65726220629bff4fe200fe5800bed321 583 SMART SM00382 362 554 4.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_08180 65726220629bff4fe200fe5800bed321 583 SUPERFAMILY SSF52540 330 572 4.19E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 SMART SM00382 278 422 6.6E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 Gene3D G3DSA:1.10.10.60 505 558 6.0E-16 T 11-10-2018 AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 345 360 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 SUPERFAMILY SSF46689 505 556 3.88E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 SUPERFAMILY SSF52540 273 496 1.09E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 Pfam PF01590 GAF domain 89 186 7.1E-5 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 Pfam PF02954 Bacterial regulatory protein, Fis family 522 555 3.3E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 Gene3D G3DSA:1.10.8.60 439 504 4.4E-8 T 11-10-2018 AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 282 295 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 Pfam PF00158 Sigma-54 interaction domain 275 421 4.9E-54 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 Gene3D G3DSA:3.40.50.300 270 430 4.6E-49 T 11-10-2018 AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 523 540 4.1E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 540 558 4.1E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_17545 d481704a98b810d4ade8a6fcc3574f33 558 Gene3D G3DSA:3.30.450.40 5 188 4.0E-47 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_12415 cd1446bcc30a2f776e222d809ee5cc36 452 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 8.3E-153 T 11-10-2018 AMS64_12415 cd1446bcc30a2f776e222d809ee5cc36 452 Pfam PF07690 Major Facilitator Superfamily 34 400 1.2E-50 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_12415 cd1446bcc30a2f776e222d809ee5cc36 452 PIRSF PIRSF002808 5 451 1.3E-173 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AMS64_12415 cd1446bcc30a2f776e222d809ee5cc36 452 Gene3D G3DSA:1.20.1250.20 240 441 1.9E-60 T 11-10-2018 AMS64_12415 cd1446bcc30a2f776e222d809ee5cc36 452 SUPERFAMILY SSF103473 13 436 7.72E-85 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_12415 cd1446bcc30a2f776e222d809ee5cc36 452 Gene3D G3DSA:1.20.1250.20 19 226 1.6E-57 T 11-10-2018 AMS64_12415 cd1446bcc30a2f776e222d809ee5cc36 452 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 11-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 AMS64_12415 cd1446bcc30a2f776e222d809ee5cc36 452 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 438 2.3E-239 T 11-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 AMS64_15335 b7dcf533d07c6c93b82aac6e66237c7a 131 SUPERFAMILY SSF54534 44 122 8.89E-19 T 11-10-2018 AMS64_15335 b7dcf533d07c6c93b82aac6e66237c7a 131 PIRSF PIRSF006092 12 123 1.7E-24 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMS64_15335 b7dcf533d07c6c93b82aac6e66237c7a 131 Gene3D G3DSA:3.10.50.30 40 131 6.9E-31 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AMS64_15335 b7dcf533d07c6c93b82aac6e66237c7a 131 Gene3D G3DSA:1.10.286.20 1 39 2.9E-6 T 11-10-2018 AMS64_15335 b7dcf533d07c6c93b82aac6e66237c7a 131 Pfam PF14760 Rnk N-terminus 4 38 8.6E-9 T 11-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AMS64_15335 b7dcf533d07c6c93b82aac6e66237c7a 131 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 45 120 1.2E-20 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMS64_04030 b196ae14feb83e963de7e0a837f7bbde 505 Gene3D G3DSA:1.20.1250.20 13 490 1.7E-84 T 11-10-2018 AMS64_04030 b196ae14feb83e963de7e0a837f7bbde 505 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 25 489 7.0E-65 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AMS64_04030 b196ae14feb83e963de7e0a837f7bbde 505 SUPERFAMILY SSF103473 26 203 5.36E-15 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_04030 b196ae14feb83e963de7e0a837f7bbde 505 Pfam PF00854 POT family 112 447 2.1E-28 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AMS64_04030 b196ae14feb83e963de7e0a837f7bbde 505 SUPERFAMILY SSF103473 199 489 2.35E-11 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_11010 fbb8f443e856483184f280b290d6b164 531 SMART SM00283 269 530 7.4E-60 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_11010 fbb8f443e856483184f280b290d6b164 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 4.6E-6 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_11010 fbb8f443e856483184f280b290d6b164 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 4.6E-6 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_11010 fbb8f443e856483184f280b290d6b164 531 Gene3D G3DSA:1.10.287.950 201 531 5.7E-65 T 11-10-2018 AMS64_11010 fbb8f443e856483184f280b290d6b164 531 SUPERFAMILY SSF58104 222 530 2.22E-66 T 11-10-2018 AMS64_11010 fbb8f443e856483184f280b290d6b164 531 SMART SM00304 201 254 1.0E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_11010 fbb8f443e856483184f280b290d6b164 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 496 5.1E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_11010 fbb8f443e856483184f280b290d6b164 531 Pfam PF00672 HAMP domain 201 248 7.7E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_02225 9e5cc66a7e915f003d3624d1e4ea1b69 335 Pfam PF08402 TOBE domain 257 330 1.5E-7 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AMS64_02225 9e5cc66a7e915f003d3624d1e4ea1b69 335 SUPERFAMILY SSF52540 4 240 1.89E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_02225 9e5cc66a7e915f003d3624d1e4ea1b69 335 SMART SM00382 28 211 2.0E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_02225 9e5cc66a7e915f003d3624d1e4ea1b69 335 SUPERFAMILY SSF50331 256 329 1.42E-6 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMS64_02225 9e5cc66a7e915f003d3624d1e4ea1b69 335 Pfam PF00005 ABC transporter 20 161 2.0E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_02225 9e5cc66a7e915f003d3624d1e4ea1b69 335 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_02225 9e5cc66a7e915f003d3624d1e4ea1b69 335 Gene3D G3DSA:3.40.50.300 1 238 9.2E-80 T 11-10-2018 AMS64_07555 566ad89d1b095e540a616083b0d1f65a 204 SUPERFAMILY SSF47616 76 193 1.17E-29 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMS64_07555 566ad89d1b095e540a616083b0d1f65a 204 Gene3D G3DSA:1.20.1050.10 81 194 2.9E-41 T 11-10-2018 AMS64_07555 566ad89d1b095e540a616083b0d1f65a 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 2.0E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMS64_07555 566ad89d1b095e540a616083b0d1f65a 204 Pfam PF13410 Glutathione S-transferase, C-terminal domain 123 187 4.8E-11 T 11-10-2018 AMS64_07555 566ad89d1b095e540a616083b0d1f65a 204 Gene3D G3DSA:3.40.30.10 1 78 3.8E-25 T 11-10-2018 AMS64_07555 566ad89d1b095e540a616083b0d1f65a 204 SUPERFAMILY SSF52833 1 86 3.43E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_11655 f13a9acaaaa62b1f4c5bbb7e510e4f1d 404 Pfam PF00266 Aminotransferase class-V 5 368 5.0E-85 T 11-10-2018 IPR000192 Aminotransferase class V domain AMS64_11655 f13a9acaaaa62b1f4c5bbb7e510e4f1d 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 55.198 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AMS64_11655 f13a9acaaaa62b1f4c5bbb7e510e4f1d 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMS64_11655 f13a9acaaaa62b1f4c5bbb7e510e4f1d 404 SUPERFAMILY SSF53383 5 391 4.34E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_11655 f13a9acaaaa62b1f4c5bbb7e510e4f1d 404 PIRSF PIRSF005572 2 384 1.5E-135 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AMS64_11655 f13a9acaaaa62b1f4c5bbb7e510e4f1d 404 Gene3D G3DSA:3.90.1150.10 5 376 5.5E-166 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_11655 f13a9acaaaa62b1f4c5bbb7e510e4f1d 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.3E-232 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AMS64_11655 f13a9acaaaa62b1f4c5bbb7e510e4f1d 404 Gene3D G3DSA:3.40.640.10 16 262 5.5E-166 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_17920 ea8be66f710647afe52c539e2813a793 320 SUPERFAMILY SSF53850 97 312 2.85E-27 T 11-10-2018 AMS64_17920 ea8be66f710647afe52c539e2813a793 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 2.6E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_17920 ea8be66f710647afe52c539e2813a793 320 Gene3D G3DSA:3.40.190.10 97 308 2.3E-32 T 11-10-2018 AMS64_17920 ea8be66f710647afe52c539e2813a793 320 SUPERFAMILY SSF46785 7 86 6.53E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_17920 ea8be66f710647afe52c539e2813a793 320 Pfam PF03466 LysR substrate binding domain 97 312 4.4E-17 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_17920 ea8be66f710647afe52c539e2813a793 320 Gene3D G3DSA:1.10.10.10 1 88 3.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_17920 ea8be66f710647afe52c539e2813a793 320 Gene3D G3DSA:3.40.190.10 179 280 2.3E-32 T 11-10-2018 AMS64_19245 3b3d9f55f4188de5e138614058d0cec6 181 Pfam PF00929 Exonuclease 9 170 2.6E-36 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMS64_19245 3b3d9f55f4188de5e138614058d0cec6 181 SUPERFAMILY SSF53098 5 180 5.31E-45 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_19245 3b3d9f55f4188de5e138614058d0cec6 181 SMART SM00479 7 180 6.8E-17 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMS64_19245 3b3d9f55f4188de5e138614058d0cec6 181 Gene3D G3DSA:3.30.420.10 1 181 4.7E-71 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_19245 3b3d9f55f4188de5e138614058d0cec6 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 42.003 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 AMS64_00190 050ee04471acb9ed358dba7243776448 394 SUPERFAMILY SSF51905 1 393 3.25E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_00190 050ee04471acb9ed358dba7243776448 394 Gene3D G3DSA:3.50.50.60 7 388 4.2E-128 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_00190 050ee04471acb9ed358dba7243776448 394 SUPERFAMILY SSF160996 190 338 3.53E-40 T 11-10-2018 AMS64_00190 050ee04471acb9ed358dba7243776448 394 Gene3D G3DSA:1.10.8.260 262 322 4.2E-128 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily AMS64_00190 050ee04471acb9ed358dba7243776448 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 1.0E-5 T 11-10-2018 AMS64_00190 050ee04471acb9ed358dba7243776448 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.0E-5 T 11-10-2018 AMS64_00190 050ee04471acb9ed358dba7243776448 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.0E-5 T 11-10-2018 AMS64_00190 050ee04471acb9ed358dba7243776448 394 Pfam PF03486 HI0933-like protein 5 392 2.0E-151 T 11-10-2018 AMS64_00190 050ee04471acb9ed358dba7243776448 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.2E-8 T 11-10-2018 AMS64_00190 050ee04471acb9ed358dba7243776448 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 2.2E-8 T 11-10-2018 AMS64_00190 050ee04471acb9ed358dba7243776448 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 2.2E-8 T 11-10-2018 AMS64_00190 050ee04471acb9ed358dba7243776448 394 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 5.7E-128 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AMS64_00190 050ee04471acb9ed358dba7243776448 394 Gene3D G3DSA:2.40.30.10 188 339 4.2E-128 T 11-10-2018 AMS64_20345 057afe45925ea13ba2bbe8d1b47583da 344 SMART SM00382 28 221 1.3E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_20345 057afe45925ea13ba2bbe8d1b47583da 344 SUPERFAMILY SSF50331 239 341 2.15E-6 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMS64_20345 057afe45925ea13ba2bbe8d1b47583da 344 SUPERFAMILY SSF52540 4 246 1.52E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_20345 057afe45925ea13ba2bbe8d1b47583da 344 Pfam PF00005 ABC transporter 19 163 4.8E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_20345 057afe45925ea13ba2bbe8d1b47583da 344 Gene3D G3DSA:3.40.50.300 2 224 1.3E-62 T 11-10-2018 AMS64_20345 057afe45925ea13ba2bbe8d1b47583da 344 Gene3D G3DSA:2.40.50.940 225 341 2.8E-7 T 11-10-2018 AMS64_20345 057afe45925ea13ba2bbe8d1b47583da 344 Gene3D G3DSA:2.40.50.140 282 332 2.8E-7 T 11-10-2018 AMS64_20345 057afe45925ea13ba2bbe8d1b47583da 344 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_09270 b884ea04df92d9a3e7b5eab56412c2d4 377 Pfam PF00268 Ribonucleotide reductase, small chain 32 333 2.1E-48 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09270 b884ea04df92d9a3e7b5eab56412c2d4 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 11-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_09270 b884ea04df92d9a3e7b5eab56412c2d4 377 SUPERFAMILY SSF47240 3 341 1.58E-109 T 11-10-2018 IPR009078 Ferritin-like superfamily AMS64_09270 b884ea04df92d9a3e7b5eab56412c2d4 377 Gene3D G3DSA:1.10.620.20 2 341 1.3E-144 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AMS64_10315 5cf13dfcda07e7a535c9077633c7812b 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 21.241 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 AMS64_10315 5cf13dfcda07e7a535c9077633c7812b 113 PIRSF PIRSF004761 1 113 4.4E-36 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 AMS64_10315 5cf13dfcda07e7a535c9077633c7812b 113 Gene3D G3DSA:3.30.2320.80 1 113 9.2E-30 T 11-10-2018 AMS64_10315 5cf13dfcda07e7a535c9077633c7812b 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 112 3.2E-34 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 AMS64_10315 5cf13dfcda07e7a535c9077633c7812b 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 6.3E-32 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 AMS64_10315 5cf13dfcda07e7a535c9077633c7812b 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 11-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site AMS64_18520 585d9094b9151f9b41e2154624a51dcc 537 TIGRFAM TIGR03238 dnd_assoc_3: DNA phosphorothioation-dependent restriction protein DptF 33 534 4.8E-143 T 11-10-2018 IPR017647 DNA phosphorothioation-dependent restriction protein DptF AMS64_02995 35476cf216d103aad9407ccd09ac36db 203 SUPERFAMILY SSF53041 4 159 1.96E-32 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AMS64_02995 35476cf216d103aad9407ccd09ac36db 203 SMART SM00857 5 159 2.3E-42 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMS64_02995 35476cf216d103aad9407ccd09ac36db 203 Gene3D G3DSA:3.40.50.1390 2 165 4.8E-33 T 11-10-2018 AMS64_02995 35476cf216d103aad9407ccd09ac36db 203 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AMS64_02995 35476cf216d103aad9407ccd09ac36db 203 Pfam PF00239 Resolvase, N terminal domain 5 159 2.4E-29 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 SUPERFAMILY SSF46689 342 437 3.72E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 Gene3D G3DSA:1.10.8.60 301 375 9.2E-25 T 11-10-2018 AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 Pfam PF00072 Response regulator receiver domain 6 115 5.3E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 SMART SM00448 4 115 4.0E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 SUPERFAMILY SSF52172 1 174 2.85E-44 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 Gene3D G3DSA:1.10.10.60 376 444 1.4E-10 T 11-10-2018 AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 SUPERFAMILY SSF52540 133 370 2.61E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 SMART SM00382 149 293 1.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 Gene3D G3DSA:3.40.50.300 120 300 3.6E-64 T 11-10-2018 AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 Pfam PF02954 Bacterial regulatory protein, Fis family 398 437 5.0E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 Gene3D G3DSA:3.40.50.2300 1 119 5.8E-36 T 11-10-2018 AMS64_15715 eeed1f0cba9a9092b3d2942522b62e16 447 Pfam PF00158 Sigma-54 interaction domain 133 295 1.4E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_07235 af186115edefcf465b39e6a4868bf274 263 SMART SM00862 39 113 2.5E-7 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_07235 af186115edefcf465b39e6a4868bf274 263 Gene3D G3DSA:1.10.10.10 11 118 1.9E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_07235 af186115edefcf465b39e6a4868bf274 263 SUPERFAMILY SSF46894 12 114 2.78E-11 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_07235 af186115edefcf465b39e6a4868bf274 263 Pfam PF00486 Transcriptional regulatory protein, C terminal 42 113 4.2E-9 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_14595 73f4771bc4d513959e9156f0493781fb 633 Pfam PF03880 DbpA RNA binding domain 499 569 1.4E-21 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AMS64_14595 73f4771bc4d513959e9156f0493781fb 633 Gene3D G3DSA:3.30.70.330 499 572 2.2E-12 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMS64_14595 73f4771bc4d513959e9156f0493781fb 633 Gene3D G3DSA:3.40.50.300 217 434 9.5E-52 T 11-10-2018 AMS64_14595 73f4771bc4d513959e9156f0493781fb 633 SUPERFAMILY SSF52540 76 363 8.8E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_14595 73f4771bc4d513959e9156f0493781fb 633 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMS64_14595 73f4771bc4d513959e9156f0493781fb 633 Gene3D G3DSA:3.40.50.300 2 214 4.1E-75 T 11-10-2018 AMS64_14595 73f4771bc4d513959e9156f0493781fb 633 SMART SM00487 27 225 1.6E-60 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_14595 73f4771bc4d513959e9156f0493781fb 633 SMART SM00490 261 342 5.5E-32 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_14595 73f4771bc4d513959e9156f0493781fb 633 Pfam PF00271 Helicase conserved C-terminal domain 234 342 4.9E-28 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_14595 73f4771bc4d513959e9156f0493781fb 633 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 3 571 44.945 T 11-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 AMS64_14595 73f4771bc4d513959e9156f0493781fb 633 Pfam PF00270 DEAD/DEAH box helicase 33 198 1.6E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_14710 bf5e5aa775aee6262cade9c5bc8705e9 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_14710 bf5e5aa775aee6262cade9c5bc8705e9 256 Pfam PF00005 ABC transporter 22 181 9.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_14710 bf5e5aa775aee6262cade9c5bc8705e9 256 PIRSF PIRSF039085 3 256 3.0E-115 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMS64_14710 bf5e5aa775aee6262cade9c5bc8705e9 256 SUPERFAMILY SSF52540 7 251 3.01E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_14710 bf5e5aa775aee6262cade9c5bc8705e9 256 SMART SM00382 31 229 8.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_14710 bf5e5aa775aee6262cade9c5bc8705e9 256 Gene3D G3DSA:3.40.50.300 3 255 9.0E-76 T 11-10-2018 AMS64_16380 2b97ed74cfa29fbc24aec2b8a111d2c4 112 Gene3D G3DSA:3.30.1450.10 29 108 4.2E-29 T 11-10-2018 IPR037873 BamE-like AMS64_16380 2b97ed74cfa29fbc24aec2b8a111d2c4 112 Pfam PF04355 SmpA / OmlA family 30 98 5.0E-28 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AMS64_16380 2b97ed74cfa29fbc24aec2b8a111d2c4 112 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 6 106 31.208 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 1.5E-239 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 Gene3D G3DSA:3.50.50.60 9 416 5.5E-172 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 2.7E-274 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 Gene3D G3DSA:1.20.58.100 431 547 4.6E-38 T 11-10-2018 AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 PIRSF PIRSF000171 1 580 3.1E-48 T 11-10-2018 AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 SUPERFAMILY SSF56425 236 356 2.39E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 380 395 9.2E-6 T 11-10-2018 AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 9.2E-6 T 11-10-2018 AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 Pfam PF00890 FAD binding domain 9 405 2.1E-120 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 SUPERFAMILY SSF51905 4 436 5.49E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 Gene3D G3DSA:3.90.700.10 246 350 5.5E-172 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 SUPERFAMILY SSF46977 452 588 8.76E-47 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 6.4E-35 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08255 1c04c20ef80e6cf67f073c0f45af5980 588 Gene3D G3DSA:4.10.80.40 548 588 4.7E-26 T 11-10-2018 AMS64_03675 799793e7792278c1f15350324f76390f 955 Pfam PF12137 RNA polymerase recycling family C-terminal 593 952 3.0E-142 T 11-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AMS64_03675 799793e7792278c1f15350324f76390f 955 SUPERFAMILY SSF52540 127 348 3.26E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_03675 799793e7792278c1f15350324f76390f 955 Gene3D G3DSA:2.30.30.140 1 53 4.5E-24 T 11-10-2018 AMS64_03675 799793e7792278c1f15350324f76390f 955 Gene3D G3DSA:2.30.30.930 55 113 2.1E-26 T 11-10-2018 AMS64_03675 799793e7792278c1f15350324f76390f 955 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 953 28.645 T 11-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AMS64_03675 799793e7792278c1f15350324f76390f 955 Gene3D G3DSA:3.40.50.10810 149 415 1.1E-96 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AMS64_03675 799793e7792278c1f15350324f76390f 955 Gene3D G3DSA:3.30.360.80 702 775 2.6E-30 T 11-10-2018 AMS64_03675 799793e7792278c1f15350324f76390f 955 Pfam PF00271 Helicase conserved C-terminal domain 479 589 8.8E-15 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_03675 799793e7792278c1f15350324f76390f 955 Gene3D G3DSA:3.40.50.300 416 621 2.3E-43 T 11-10-2018 AMS64_03675 799793e7792278c1f15350324f76390f 955 Pfam PF00176 SNF2 family N-terminal domain 173 342 7.2E-16 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AMS64_03675 799793e7792278c1f15350324f76390f 955 SMART SM00487 149 341 1.9E-19 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_03675 799793e7792278c1f15350324f76390f 955 SUPERFAMILY SSF52540 272 632 3.66E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_03675 799793e7792278c1f15350324f76390f 955 SMART SM00490 505 589 1.1E-12 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 PRINTS PR00073 Coprogen oxidase signature 90 114 1.1E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 PRINTS PR00073 Coprogen oxidase signature 162 191 1.1E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 PRINTS PR00073 Coprogen oxidase signature 262 288 1.1E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 PRINTS PR00073 Coprogen oxidase signature 31 47 1.1E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 PRINTS PR00073 Coprogen oxidase signature 48 69 1.1E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 PRINTS PR00073 Coprogen oxidase signature 125 147 1.1E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 PRINTS PR00073 Coprogen oxidase signature 234 261 1.1E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 56.933 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 Gene3D G3DSA:3.40.1500.10 1 302 1.2E-137 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 PIRSF PIRSF000166 2 302 7.7E-127 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 SUPERFAMILY SSF102886 4 302 1.26E-139 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_22310 3745ef55fa2edcb931c2692d53dcd858 302 Pfam PF01218 Coproporphyrinogen III oxidase 8 302 2.3E-132 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMS64_00280 700da718705018847b37064252879d4f 346 Pfam PF12146 Serine aminopeptidase, S33 71 329 6.8E-61 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AMS64_00280 700da718705018847b37064252879d4f 346 Gene3D G3DSA:3.40.50.1820 46 346 3.6E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_00280 700da718705018847b37064252879d4f 346 SUPERFAMILY SSF53474 51 340 7.84E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 Gene3D G3DSA:3.40.50.720 233 366 2.3E-37 T 11-10-2018 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 SUPERFAMILY SSF116726 390 451 1.44E-8 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 SUPERFAMILY SSF51735 1 152 3.63E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 SUPERFAMILY SSF51735 232 376 1.68E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 Pfam PF02080 TrkA-C domain 156 225 3.8E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 Pfam PF02080 TrkA-C domain 391 451 8.0E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 Gene3D G3DSA:3.30.70.1450 140 232 1.8E-20 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 Gene3D G3DSA:3.30.70.1450 367 458 3.3E-28 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 Gene3D G3DSA:3.40.50.720 2 139 5.2E-50 T 11-10-2018 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 SUPERFAMILY SSF116726 147 226 6.8E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 Pfam PF02254 TrkA-N domain 3 106 3.3E-29 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 Pfam PF02254 TrkA-N domain 235 350 9.6E-26 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.0E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.0E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.0E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.0E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMS64_22360 5ef0777c12f1cf8ff39d3e933a5d45db 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.0E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMS64_03320 152cba08ca3b28a664e644721f380235 568 Pfam PF00437 Type II/IV secretion system protein 191 458 2.8E-92 T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_03320 152cba08ca3b28a664e644721f380235 568 Gene3D G3DSA:3.30.450.90 153 291 9.9E-48 T 11-10-2018 AMS64_03320 152cba08ca3b28a664e644721f380235 568 SUPERFAMILY SSF160246 5 141 1.78E-30 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AMS64_03320 152cba08ca3b28a664e644721f380235 568 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 386 400 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_03320 152cba08ca3b28a664e644721f380235 568 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 146 4.6E-15 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal AMS64_03320 152cba08ca3b28a664e644721f380235 568 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 9 567 4.9E-270 T 11-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 AMS64_03320 152cba08ca3b28a664e644721f380235 568 Gene3D G3DSA:3.30.300.160 63 142 4.1E-5 T 11-10-2018 AMS64_03320 152cba08ca3b28a664e644721f380235 568 Gene3D G3DSA:3.40.50.300 295 568 3.5E-108 T 11-10-2018 AMS64_03320 152cba08ca3b28a664e644721f380235 568 SUPERFAMILY SSF52540 164 566 1.43E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_04845 8b492cf1e296da5d9309f245c6593426 454 Gene3D G3DSA:1.10.3860.10 16 452 4.5E-88 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_04845 8b492cf1e296da5d9309f245c6593426 454 PRINTS PR00173 Glutamate-aspartate symporter signature 24 44 1.1E-18 T 11-10-2018 AMS64_04845 8b492cf1e296da5d9309f245c6593426 454 PRINTS PR00173 Glutamate-aspartate symporter signature 72 92 1.1E-18 T 11-10-2018 AMS64_04845 8b492cf1e296da5d9309f245c6593426 454 PRINTS PR00173 Glutamate-aspartate symporter signature 390 410 1.1E-18 T 11-10-2018 AMS64_04845 8b492cf1e296da5d9309f245c6593426 454 PRINTS PR00173 Glutamate-aspartate symporter signature 363 382 1.1E-18 T 11-10-2018 AMS64_04845 8b492cf1e296da5d9309f245c6593426 454 PRINTS PR00173 Glutamate-aspartate symporter signature 176 198 1.1E-18 T 11-10-2018 AMS64_04845 8b492cf1e296da5d9309f245c6593426 454 SUPERFAMILY SSF118215 26 435 8.37E-80 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_04845 8b492cf1e296da5d9309f245c6593426 454 Pfam PF00375 Sodium:dicarboxylate symporter family 28 435 4.6E-90 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 Gene3D G3DSA:3.30.200.210 41 667 0.0 T 11-10-2018 AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 1.1E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 SUPERFAMILY SSF50692 689 829 1.76E-43 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 2.4E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 24 2.5E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 Gene3D G3DSA:3.40.50.740 98 624 0.0 T 11-10-2018 AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 SUPERFAMILY SSF53706 38 700 7.33E-206 T 11-10-2018 AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 Gene3D G3DSA:3.40.228.10 177 704 0.0 T 11-10-2018 AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 SMART SM00926 41 95 6.3E-14 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 829 32.793 T 11-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 8.9E-90 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 Gene3D G3DSA:2.40.40.20 705 829 2.6E-49 T 11-10-2018 AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 829 0.0 T 11-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 AMS64_13495 bfcbf1b2f3143ce1b86bde39c6648a8d 829 Pfam PF01568 Molydopterin dinucleotide binding domain 715 823 5.1E-28 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMS64_03590 c9f598b0f4b75d4f0983d2f657b2b67a 62 Pfam PF02599 Global regulator protein family 1 52 2.6E-27 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AMS64_03590 c9f598b0f4b75d4f0983d2f657b2b67a 62 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 55 3.1E-30 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AMS64_03590 c9f598b0f4b75d4f0983d2f657b2b67a 62 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 59 17.231 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AMS64_03590 c9f598b0f4b75d4f0983d2f657b2b67a 62 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AMS64_03590 c9f598b0f4b75d4f0983d2f657b2b67a 62 Gene3D G3DSA:3.30.70.1680 1 57 3.4E-30 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AMS64_03590 c9f598b0f4b75d4f0983d2f657b2b67a 62 SUPERFAMILY SSF117130 1 54 3.92E-21 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AMS64_22290 8212d1b96486af783ebdf071dec6b1c5 205 Gene3D G3DSA:1.10.760.10 21 106 3.6E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_22290 8212d1b96486af783ebdf071dec6b1c5 205 Pfam PF00034 Cytochrome c 117 203 4.4E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_22290 8212d1b96486af783ebdf071dec6b1c5 205 Pfam PF00034 Cytochrome c 25 105 5.9E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_22290 8212d1b96486af783ebdf071dec6b1c5 205 SUPERFAMILY SSF46626 19 104 3.3E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_22290 8212d1b96486af783ebdf071dec6b1c5 205 Gene3D G3DSA:1.10.760.10 111 205 4.2E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_22290 8212d1b96486af783ebdf071dec6b1c5 205 PIRSF PIRSF000005 1 205 1.5E-64 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AMS64_22290 8212d1b96486af783ebdf071dec6b1c5 205 SUPERFAMILY SSF46626 114 203 8.27E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_22290 8212d1b96486af783ebdf071dec6b1c5 205 PRINTS PR00605 Class IC cytochrome C signature 32 43 5.0E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMS64_22290 8212d1b96486af783ebdf071dec6b1c5 205 PRINTS PR00605 Class IC cytochrome C signature 179 201 5.0E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 Gene3D G3DSA:3.10.20.30 234 329 1.0E-16 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 Gene3D G3DSA:2.40.30.10 3 99 2.1E-21 T 11-10-2018 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 Pfam PF00175 Oxidoreductase NAD-binding domain 110 213 4.5E-15 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 109 128 3.6E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 52 59 3.6E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 146 157 3.6E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 199 207 3.6E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 SUPERFAMILY SSF52343 89 229 1.31E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 Gene3D G3DSA:3.40.50.80 105 233 8.5E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 280 288 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 SUPERFAMILY SSF63380 4 100 3.76E-21 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 PRINTS PR00406 Cytochrome B5 reductase signature 109 128 9.4E-10 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 PRINTS PR00406 Cytochrome B5 reductase signature 146 157 9.4E-10 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 PRINTS PR00406 Cytochrome B5 reductase signature 86 100 9.4E-10 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 PRINTS PR00406 Cytochrome B5 reductase signature 199 207 9.4E-10 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 PRINTS PR00406 Cytochrome B5 reductase signature 52 59 9.4E-10 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 SUPERFAMILY SSF54292 222 328 2.75E-22 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 253 321 1.4E-7 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMS64_04920 4c6b5cf595089c892be80e03923175ee 329 Pfam PF00970 Oxidoreductase FAD-binding domain 33 99 3.9E-7 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 138 357 8.7E-50 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 Gene3D G3DSA:3.40.630.40 126 368 3.4E-73 T 11-10-2018 AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 Pfam PF11741 AMIN domain 13 113 1.9E-21 T 11-10-2018 IPR021731 AMIN domain AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 SMART SM00646 198 357 7.3E-63 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 SUPERFAMILY SSF53187 135 360 1.95E-53 T 11-10-2018 AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 SUPERFAMILY SSF54106 516 560 4.19E-10 T 11-10-2018 AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 SMART SM00257 453 496 3.7E-13 T 11-10-2018 IPR018392 LysM domain AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 SMART SM00257 517 560 2.1E-14 T 11-10-2018 IPR018392 LysM domain AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 Pfam PF01476 LysM domain 518 560 8.7E-12 T 11-10-2018 IPR018392 LysM domain AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 Pfam PF01476 LysM domain 454 496 8.2E-12 T 11-10-2018 IPR018392 LysM domain AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 SUPERFAMILY SSF54106 452 496 3.4E-9 T 11-10-2018 AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 Gene3D G3DSA:3.10.350.10 505 562 2.3E-14 T 11-10-2018 IPR036779 LysM domain superfamily AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 Gene3D G3DSA:3.10.350.10 445 504 9.1E-14 T 11-10-2018 IPR036779 LysM domain superfamily AMS64_19435 f6644827cc756f48f8a6d6523ce2d140 562 Gene3D G3DSA:2.60.40.3500 5 114 2.9E-26 T 11-10-2018 AMS64_14980 30993aec8a034ddd2ab675c20f9ef995 407 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 303 316 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AMS64_14980 30993aec8a034ddd2ab675c20f9ef995 407 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 10 399 3.2E-129 T 11-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 AMS64_14980 30993aec8a034ddd2ab675c20f9ef995 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 4.5E-14 T 11-10-2018 AMS64_14980 30993aec8a034ddd2ab675c20f9ef995 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 4.5E-14 T 11-10-2018 AMS64_14980 30993aec8a034ddd2ab675c20f9ef995 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 4.5E-14 T 11-10-2018 AMS64_14980 30993aec8a034ddd2ab675c20f9ef995 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 165 180 4.5E-14 T 11-10-2018 AMS64_14980 30993aec8a034ddd2ab675c20f9ef995 407 SUPERFAMILY SSF51905 9 390 2.48E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_14980 30993aec8a034ddd2ab675c20f9ef995 407 Pfam PF01494 FAD binding domain 9 330 6.6E-20 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AMS64_14980 30993aec8a034ddd2ab675c20f9ef995 407 Gene3D G3DSA:3.30.9.50 89 278 3.7E-95 T 11-10-2018 AMS64_14980 30993aec8a034ddd2ab675c20f9ef995 407 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 10 398 8.0E-121 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AMS64_14980 30993aec8a034ddd2ab675c20f9ef995 407 Gene3D G3DSA:3.50.50.60 10 347 3.7E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_07515 0e13fdcb23f30fa8f434d1b435251bdc 403 Gene3D G3DSA:3.40.50.150 122 401 9.1E-76 T 11-10-2018 AMS64_07515 0e13fdcb23f30fa8f434d1b435251bdc 403 Pfam PF01189 16S rRNA methyltransferase RsmB/F 219 385 1.3E-44 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AMS64_07515 0e13fdcb23f30fa8f434d1b435251bdc 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 347 363 5.5E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_07515 0e13fdcb23f30fa8f434d1b435251bdc 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 297 309 5.5E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_07515 0e13fdcb23f30fa8f434d1b435251bdc 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 230 240 5.5E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_07515 0e13fdcb23f30fa8f434d1b435251bdc 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 201 215 5.5E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_07515 0e13fdcb23f30fa8f434d1b435251bdc 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 384 401 5.5E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_07515 0e13fdcb23f30fa8f434d1b435251bdc 403 SUPERFAMILY SSF53335 117 401 1.56E-65 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.10 175 270 1.4E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.10 271 361 8.2E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 2297 2424 4.05E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 491 618 1.28E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3752 3770 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 1910 2037 3.27E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 1653 1779 8.63E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 1524 1650 4.05E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 2168 2295 2.88E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 879 1005 3.4E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 1262 1374 4.8E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 1133 1245 4.8E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 1778 1890 9.9E-6 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 1004 1116 4.8E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 1391 1503 4.8E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 875 987 4.8E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 488 600 4.7E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 1649 1761 1.4E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 2423 2536 4.5E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 2165 2277 1.2E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 617 729 4.8E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 2294 2406 1.2E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 1907 2019 1.2E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 746 858 4.8E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 363 471 3.2E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 2036 2148 1.2E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Gene3D G3DSA:2.60.40.2030 1520 1632 4.8E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 1008 1134 3.53E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 1266 1392 3.14E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF51120 3600 3852 2.49E-26 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3743 3761 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 362 470 1.7E-18 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 2039 2166 3.01E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 1783 1908 9.94E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3040 3117 1.8E-4 T 11-10-2018 IPR010221 VCBS repeat AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 750 876 3.79E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 1395 1521 3.27E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 1137 1263 3.14E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 PRINTS PR00313 NodO calcium binding signature 3765 3773 1.1E-6 T 11-10-2018 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 PRINTS PR00313 NodO calcium binding signature 3735 3746 1.1E-6 T 11-10-2018 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 PRINTS PR00313 NodO calcium binding signature 3774 3783 1.1E-6 T 11-10-2018 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 PRINTS PR00313 NodO calcium binding signature 3756 3764 1.1E-6 T 11-10-2018 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SMART SM00237 350 448 7.3E-4 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 2426 2531 5.23E-10 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 3796 3888 1.2E-10 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 SUPERFAMILY SSF141072 621 747 3.01E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 865 967 0.0046 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 1769 1870 0.018 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 736 838 0.0046 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 364 447 2.9E-8 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 1123 1225 0.0046 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 1381 1483 0.0046 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 607 709 0.0046 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 2285 2386 0.014 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 1898 1999 0.014 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 994 1096 0.0046 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 2414 2515 0.014 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 1510 1612 0.0046 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 2027 2128 0.014 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 2156 2257 0.014 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 1252 1354 0.0046 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 1639 1741 0.0046 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_05535 b3306d563c9d6c13c4d8cda2b7fe5eb7 3897 Pfam PF03160 Calx-beta domain 478 580 0.0029 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMS64_11300 ba9ecd46ef16e4d5f82478c3a6f16bfd 411 Pfam PF00498 FHA domain 34 101 3.2E-5 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMS64_11300 ba9ecd46ef16e4d5f82478c3a6f16bfd 411 SUPERFAMILY SSF49879 20 109 5.42E-8 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AMS64_11300 ba9ecd46ef16e4d5f82478c3a6f16bfd 411 Gene3D G3DSA:2.60.200.20 3 111 5.0E-9 T 11-10-2018 AMS64_11300 ba9ecd46ef16e4d5f82478c3a6f16bfd 411 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 8 405 7.0E-129 T 11-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein AMS64_18650 9233f9a08e7ba0011302c780e2c07e46 186 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_18650 9233f9a08e7ba0011302c780e2c07e46 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 9.2E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_18650 9233f9a08e7ba0011302c780e2c07e46 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 31 1.3E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_13580 a99a125840c58ba3e53207018c2796ee 162 Gene3D G3DSA:2.40.280.10 7 135 3.0E-44 T 11-10-2018 IPR023620 Small protein B AMS64_13580 a99a125840c58ba3e53207018c2796ee 162 SUPERFAMILY SSF74982 8 139 1.2E-48 T 11-10-2018 IPR023620 Small protein B AMS64_13580 a99a125840c58ba3e53207018c2796ee 162 Hamap MF_00023 SsrA-binding protein [smpB]. 1 162 70.867 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMS64_13580 a99a125840c58ba3e53207018c2796ee 162 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 7.3E-54 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMS64_13580 a99a125840c58ba3e53207018c2796ee 162 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site AMS64_13580 a99a125840c58ba3e53207018c2796ee 162 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 5.0E-50 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMS64_13580 a99a125840c58ba3e53207018c2796ee 162 Pfam PF01668 SmpB protein 15 158 2.8E-56 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 SUPERFAMILY SSF82693 137 332 3.77E-28 T 11-10-2018 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 Gene3D G3DSA:1.20.1640.10 9 511 0.0 T 11-10-2018 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 Gene3D G3DSA:3.30.70.1440 669 866 0.0 T 11-10-2018 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 SUPERFAMILY SSF82693 673 857 1.15E-22 T 11-10-2018 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 Gene3D G3DSA:3.30.70.1430 566 668 0.0 T 11-10-2018 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 SUPERFAMILY SSF82693 564 671 1.1E-22 T 11-10-2018 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 11-10-2018 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 4.7E-102 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 4.7E-102 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 4.7E-102 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 4.7E-102 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 4.7E-102 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 4.7E-102 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 4.7E-102 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 4.7E-102 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 4.7E-102 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 SUPERFAMILY SSF82866 831 1027 4.32E-45 T 11-10-2018 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 Gene3D G3DSA:3.30.70.1430 39 817 0.0 T 11-10-2018 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 Gene3D G3DSA:1.20.1640.10 512 1023 0.0 T 11-10-2018 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 SUPERFAMILY SSF82693 39 132 1.5E-26 T 11-10-2018 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 SUPERFAMILY SSF82714 722 807 2.22E-22 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 Pfam PF00873 AcrB/AcrD/AcrF family 2 1026 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1028 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 SUPERFAMILY SSF82714 184 273 1.44E-19 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13020 57abd7815d76272a3e05e97a7af19644 1034 SUPERFAMILY SSF82866 298 499 1.96E-51 T 11-10-2018 AMS64_19330 4d1d9f27f8bd9cf7ea3084988d15aaec 331 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 327 37.374 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 AMS64_19330 4d1d9f27f8bd9cf7ea3084988d15aaec 331 Gene3D G3DSA:3.40.718.10 2 329 2.4E-131 T 11-10-2018 AMS64_19330 4d1d9f27f8bd9cf7ea3084988d15aaec 331 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 6.4E-132 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AMS64_19330 4d1d9f27f8bd9cf7ea3084988d15aaec 331 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 320 4.0E-111 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AMS64_19330 4d1d9f27f8bd9cf7ea3084988d15aaec 331 SUPERFAMILY SSF53659 4 326 2.1E-117 T 11-10-2018 AMS64_20310 681e88cb64f3323ad21499578f719f5b 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 56.185 T 11-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AMS64_20310 681e88cb64f3323ad21499578f719f5b 311 SUPERFAMILY SSF51735 1 145 1.32E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_20310 681e88cb64f3323ad21499578f719f5b 311 Gene3D G3DSA:3.90.110.10 147 311 3.0E-53 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMS64_20310 681e88cb64f3323ad21499578f719f5b 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.3E-44 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AMS64_20310 681e88cb64f3323ad21499578f719f5b 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 8.2E-128 T 11-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 AMS64_20310 681e88cb64f3323ad21499578f719f5b 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 11-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AMS64_20310 681e88cb64f3323ad21499578f719f5b 311 Gene3D G3DSA:3.40.50.720 1 146 1.1E-63 T 11-10-2018 AMS64_20310 681e88cb64f3323ad21499578f719f5b 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.2E-50 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AMS64_20310 681e88cb64f3323ad21499578f719f5b 311 SUPERFAMILY SSF56327 146 310 1.94E-43 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMS64_20310 681e88cb64f3323ad21499578f719f5b 311 PIRSF PIRSF000102 1 306 3.2E-57 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMS64_00950 2c7d08651693856e5b11d56bde5686c3 205 SUPERFAMILY SSF54980 137 203 4.32E-14 T 11-10-2018 IPR035647 EF-G domain III/V-like AMS64_00950 2c7d08651693856e5b11d56bde5686c3 205 Gene3D G3DSA:3.30.230.30 1 134 5.9E-51 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily AMS64_00950 2c7d08651693856e5b11d56bde5686c3 205 Gene3D G3DSA:3.30.70.240 136 205 1.5E-7 T 11-10-2018 AMS64_00950 2c7d08651693856e5b11d56bde5686c3 205 SUPERFAMILY SSF54211 4 131 3.07E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_00950 2c7d08651693856e5b11d56bde5686c3 205 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 200 3.8E-65 T 11-10-2018 IPR015796 Impact family, bacterial/archaeal AMS64_00950 2c7d08651693856e5b11d56bde5686c3 205 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 81 110 - T 11-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AMS64_00950 2c7d08651693856e5b11d56bde5686c3 205 Pfam PF01205 Uncharacterized protein family UPF0029 19 123 2.4E-26 T 11-10-2018 IPR001498 Impact, N-terminal AMS64_00950 2c7d08651693856e5b11d56bde5686c3 205 Pfam PF09186 Domain of unknown function (DUF1949) 142 197 2.2E-14 T 11-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AMS64_16855 23d576722968aee94b5d31fdaee61564 190 Gene3D G3DSA:1.10.10.10 4 84 1.5E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_16855 23d576722968aee94b5d31fdaee61564 190 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 7 172 1.5E-35 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMS64_16855 23d576722968aee94b5d31fdaee61564 190 SUPERFAMILY SSF46785 4 84 1.51E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_16855 23d576722968aee94b5d31fdaee61564 190 SUPERFAMILY SSF46785 87 162 1.56E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_16855 23d576722968aee94b5d31fdaee61564 190 Gene3D G3DSA:1.10.10.10 85 177 2.4E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_16855 23d576722968aee94b5d31fdaee61564 190 PIRSF PIRSF019345 3 182 1.7E-55 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMS64_16855 23d576722968aee94b5d31fdaee61564 190 Pfam PF04079 Segregation and condensation complex subunit ScpB 11 171 8.2E-53 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMS64_01805 140dcf3884c9cf94a5afc4d8d17fd77b 413 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMS64_01805 140dcf3884c9cf94a5afc4d8d17fd77b 413 Gene3D G3DSA:3.40.50.720 160 411 6.1E-80 T 11-10-2018 AMS64_01805 140dcf3884c9cf94a5afc4d8d17fd77b 413 Gene3D G3DSA:3.40.50.10380 1 159 1.1E-66 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AMS64_01805 140dcf3884c9cf94a5afc4d8d17fd77b 413 SMART SM01274 17 150 5.2E-74 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMS64_01805 140dcf3884c9cf94a5afc4d8d17fd77b 413 Pfam PF00390 Malic enzyme, N-terminal domain 19 116 9.6E-21 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMS64_01805 140dcf3884c9cf94a5afc4d8d17fd77b 413 SUPERFAMILY SSF51735 162 407 5.92E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_01805 140dcf3884c9cf94a5afc4d8d17fd77b 413 Pfam PF03949 Malic enzyme, NAD binding domain 164 355 5.3E-24 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMS64_01805 140dcf3884c9cf94a5afc4d8d17fd77b 413 PIRSF PIRSF000106 42 412 5.3E-69 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_01805 140dcf3884c9cf94a5afc4d8d17fd77b 413 SUPERFAMILY SSF53223 8 160 2.81E-51 T 11-10-2018 AMS64_01805 140dcf3884c9cf94a5afc4d8d17fd77b 413 SMART SM00919 162 398 6.5E-133 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMS64_10925 ab8bc208c0aa9b177e0eb5b4553f2cbe 215 Gene3D G3DSA:3.40.50.150 1 214 4.7E-58 T 11-10-2018 AMS64_10925 ab8bc208c0aa9b177e0eb5b4553f2cbe 215 SUPERFAMILY SSF53335 1 213 6.12E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_10925 ab8bc208c0aa9b177e0eb5b4553f2cbe 215 PIRSF PIRSF023956 1 214 7.5E-64 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AMS64_10925 ab8bc208c0aa9b177e0eb5b4553f2cbe 215 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 213 34.429 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AMS64_10925 ab8bc208c0aa9b177e0eb5b4553f2cbe 215 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 211 9.3E-68 T 11-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 AMS64_10925 ab8bc208c0aa9b177e0eb5b4553f2cbe 215 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 213 1.8E-58 T 11-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AMS64_05050 0dd41b47f456a5c9d0ffd7273122f082 458 SMART SM00345 19 78 4.2E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_05050 0dd41b47f456a5c9d0ffd7273122f082 458 Pfam PF00155 Aminotransferase class I and II 123 379 2.9E-15 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMS64_05050 0dd41b47f456a5c9d0ffd7273122f082 458 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 78 7.3E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_05050 0dd41b47f456a5c9d0ffd7273122f082 458 SUPERFAMILY SSF46785 13 82 1.25E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_05050 0dd41b47f456a5c9d0ffd7273122f082 458 Gene3D G3DSA:1.10.10.10 9 79 2.0E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_05050 0dd41b47f456a5c9d0ffd7273122f082 458 Gene3D G3DSA:3.90.1150.10 113 448 8.7E-64 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_05050 0dd41b47f456a5c9d0ffd7273122f082 458 Gene3D G3DSA:3.40.640.10 132 348 8.7E-64 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_05050 0dd41b47f456a5c9d0ffd7273122f082 458 SUPERFAMILY SSF53383 79 449 1.79E-70 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_11040 a7f66ef8b72b2e38c798a3b66ed1dae9 550 Gene3D G3DSA:3.30.9.90 74 451 2.0E-165 T 11-10-2018 AMS64_11040 a7f66ef8b72b2e38c798a3b66ed1dae9 550 Pfam PF01946 Thi4 family 4 60 2.4E-7 T 11-10-2018 AMS64_11040 a7f66ef8b72b2e38c798a3b66ed1dae9 550 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 447 547 9.2E-47 T 11-10-2018 AMS64_11040 a7f66ef8b72b2e38c798a3b66ed1dae9 550 SUPERFAMILY SSF54862 451 550 3.26E-25 T 11-10-2018 AMS64_11040 a7f66ef8b72b2e38c798a3b66ed1dae9 550 SUPERFAMILY SSF51905 3 449 2.34E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_11040 a7f66ef8b72b2e38c798a3b66ed1dae9 550 Gene3D G3DSA:3.30.70.20 452 545 1.1E-35 T 11-10-2018 AMS64_11040 a7f66ef8b72b2e38c798a3b66ed1dae9 550 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 356 8.6E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11040 a7f66ef8b72b2e38c798a3b66ed1dae9 550 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 8.6E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11040 a7f66ef8b72b2e38c798a3b66ed1dae9 550 Gene3D G3DSA:3.50.50.60 7 385 2.0E-165 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_11040 a7f66ef8b72b2e38c798a3b66ed1dae9 550 SUPERFAMILY SSF54373 206 305 3.65E-30 T 11-10-2018 AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1304 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 SUPERFAMILY SSF56042 837 1045 2.39E-57 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 Gene3D G3DSA:3.40.50.880 993 1307 4.8E-138 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1052 1303 1.8E-103 T 11-10-2018 AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 SUPERFAMILY SSF109736 165 230 1.12E-21 T 11-10-2018 AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 Pfam PF02769 AIR synthase related protein, C-terminal domain 848 974 6.1E-14 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 Pfam PF02769 AIR synthase related protein, C-terminal domain 442 599 2.2E-29 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 SUPERFAMILY SSF55326 629 826 1.26E-67 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1307 21.466 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 Gene3D G3DSA:3.90.650.10 431 616 2.4E-54 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 SMART SM01211 1051 1306 3.2E-155 T 11-10-2018 AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 SUPERFAMILY SSF55326 231 438 4.88E-65 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 SUPERFAMILY SSF82697 2 162 6.8E-49 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 Gene3D G3DSA:3.90.650.10 821 992 3.9E-32 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 SUPERFAMILY SSF52317 1048 1303 3.13E-96 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 Gene3D G3DSA:1.10.8.750 163 223 1.7E-27 T 11-10-2018 AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 SUPERFAMILY SSF56042 440 665 2.09E-53 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 Gene3D G3DSA:3.30.1330.10 632 820 2.9E-22 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMS64_11560 22a5aef1fdce289b838479258ab1e06b 1307 Gene3D G3DSA:3.30.1330.10 224 430 1.3E-42 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMS64_20490 1d49a15d8f2873287aa7ec581b6409de 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 58 249 2.3E-7 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_20490 1d49a15d8f2873287aa7ec581b6409de 275 Gene3D G3DSA:3.40.190.10 57 249 4.1E-9 T 11-10-2018 AMS64_20490 1d49a15d8f2873287aa7ec581b6409de 275 SUPERFAMILY SSF53850 54 256 1.65E-17 T 11-10-2018 AMS64_20490 1d49a15d8f2873287aa7ec581b6409de 275 Gene3D G3DSA:3.40.190.10 120 213 4.1E-9 T 11-10-2018 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 SUPERFAMILY SSF142984 264 347 1.01E-18 T 11-10-2018 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 Gene3D G3DSA:1.20.1440.230 350 450 6.7E-26 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 365 376 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 Gene3D G3DSA:3.40.50.11540 73 252 4.8E-78 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 188 203 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 Pfam PF10531 SLBB domain 269 315 1.4E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 SUPERFAMILY SSF140490 349 443 4.71E-30 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 Gene3D G3DSA:3.10.20.600 257 349 7.3E-23 T 11-10-2018 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 SUPERFAMILY SSF142019 34 258 8.63E-86 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 SMART SM00928 352 397 2.6E-20 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 27 439 2.0E-194 T 11-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 68 240 7.8E-51 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14515 56ad326f427b464e5bae035b91a297d9 461 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 355 437 2.0E-24 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_06560 6ee999addd52327e0c995d0a1f779984 298 Gene3D G3DSA:3.40.190.10 161 261 1.2E-64 T 11-10-2018 AMS64_06560 6ee999addd52327e0c995d0a1f779984 298 SUPERFAMILY SSF53850 88 296 1.63E-42 T 11-10-2018 AMS64_06560 6ee999addd52327e0c995d0a1f779984 298 SUPERFAMILY SSF46785 1 110 1.2E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_06560 6ee999addd52327e0c995d0a1f779984 298 Pfam PF03466 LysR substrate binding domain 87 291 2.2E-47 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_06560 6ee999addd52327e0c995d0a1f779984 298 Gene3D G3DSA:3.40.190.10 91 289 1.2E-64 T 11-10-2018 AMS64_06560 6ee999addd52327e0c995d0a1f779984 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.3E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06560 6ee999addd52327e0c995d0a1f779984 298 Gene3D G3DSA:1.10.10.10 1 84 1.9E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_06560 6ee999addd52327e0c995d0a1f779984 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06560 6ee999addd52327e0c995d0a1f779984 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06560 6ee999addd52327e0c995d0a1f779984 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_21985 36ac5fe110965c38854ada6d7e59969c 222 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 20 120 8.0E-23 T 11-10-2018 IPR013559 YheO-like AMS64_21985 36ac5fe110965c38854ada6d7e59969c 222 Pfam PF08348 YheO-like PAS domain 22 125 5.8E-33 T 11-10-2018 IPR013559 YheO-like AMS64_21985 36ac5fe110965c38854ada6d7e59969c 222 Pfam PF13309 HTH domain 153 213 8.4E-15 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain AMS64_00490 042c21e72355db73db59effeab305ba4 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 159 2.2E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMS64_00490 042c21e72355db73db59effeab305ba4 698 SUPERFAMILY SSF56935 38 698 5.49E-120 T 11-10-2018 AMS64_00490 042c21e72355db73db59effeab305ba4 698 Gene3D G3DSA:2.170.130.10 37 169 3.2E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMS64_00490 042c21e72355db73db59effeab305ba4 698 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 11-10-2018 IPR010916 TonB box, conserved site AMS64_00490 042c21e72355db73db59effeab305ba4 698 Gene3D G3DSA:2.40.170.20 170 698 1.8E-125 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMS64_00490 042c21e72355db73db59effeab305ba4 698 Pfam PF00593 TonB dependent receptor 253 697 3.0E-53 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMS64_00490 042c21e72355db73db59effeab305ba4 698 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 697 3.0E-100 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AMS64_00760 5699989392be491f767a7fe355eb9ddf 496 PIRSF PIRSF001267 1 496 5.4E-174 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AMS64_00760 5699989392be491f767a7fe355eb9ddf 496 Pfam PF02541 Ppx/GppA phosphatase family 20 300 2.3E-82 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AMS64_00760 5699989392be491f767a7fe355eb9ddf 496 SUPERFAMILY SSF109604 306 493 3.02E-47 T 11-10-2018 AMS64_00760 5699989392be491f767a7fe355eb9ddf 496 SUPERFAMILY SSF53067 131 301 8.16E-42 T 11-10-2018 AMS64_00760 5699989392be491f767a7fe355eb9ddf 496 SUPERFAMILY SSF53067 6 124 1.29E-33 T 11-10-2018 AMS64_00760 5699989392be491f767a7fe355eb9ddf 496 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 1 494 54.374 T 11-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 AMS64_00760 5699989392be491f767a7fe355eb9ddf 496 Gene3D G3DSA:3.30.420.150 111 288 1.5E-80 T 11-10-2018 AMS64_00760 5699989392be491f767a7fe355eb9ddf 496 Gene3D G3DSA:1.10.3210.10 303 496 5.2E-51 T 11-10-2018 AMS64_00760 5699989392be491f767a7fe355eb9ddf 496 Gene3D G3DSA:3.30.420.40 8 296 1.5E-80 T 11-10-2018 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 SUPERFAMILY SSF69705 1 129 2.62E-39 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 345 8.9E-124 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 413 28.344 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 Gene3D G3DSA:1.10.150.20 434 493 1.1E-24 T 11-10-2018 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 SUPERFAMILY SSF50249 134 202 6.57E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 Pfam PF13184 NusA-like KH domain 233 300 6.1E-25 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 Gene3D G3DSA:3.30.1480.10 1 132 1.3E-41 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 SUPERFAMILY SSF47794 432 495 2.35E-16 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 SMART SM00316 136 203 1.9E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 SUPERFAMILY SSF47794 358 419 4.24E-16 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 368 417 2.2E-18 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 492 1.8E-17 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 Gene3D G3DSA:3.30.300.20 202 280 9.3E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 Pfam PF14520 Helix-hairpin-helix domain 435 489 1.7E-9 T 11-10-2018 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 Pfam PF08529 NusA N-terminal domain 4 126 3.5E-35 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 Gene3D G3DSA:2.40.50.140 138 201 9.2E-18 T 11-10-2018 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 Gene3D G3DSA:3.30.300.20 281 349 3.9E-24 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 SUPERFAMILY SSF54814 204 281 1.18E-27 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 SUPERFAMILY SSF54814 282 346 2.53E-15 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMS64_18775 50ddc6fd36ff514ee66f1143bf02eb2a 500 Gene3D G3DSA:1.10.150.20 356 424 2.1E-25 T 11-10-2018 AMS64_16405 b5881329278952f45eb8dc990f4705f7 399 Pfam PF12704 MacB-like periplasmic core domain 21 242 1.8E-29 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AMS64_16405 b5881329278952f45eb8dc990f4705f7 399 Pfam PF02687 FtsX-like permease family 305 392 6.9E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMS64_09485 978eda8e446f9e66e380823a3d8e2a8b 59 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 1 45 2.0E-11 T 11-10-2018 IPR008621 Cbb3-type cytochrome oxidase component AMS64_18720 dd63807c3e656ead567aaec9f0e7d907 641 Gene3D G3DSA:1.10.287.950 303 592 5.8E-71 T 11-10-2018 AMS64_18720 dd63807c3e656ead567aaec9f0e7d907 641 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 417 577 1.4E-34 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_18720 dd63807c3e656ead567aaec9f0e7d907 641 SUPERFAMILY SSF158472 213 261 4.84E-9 T 11-10-2018 AMS64_18720 dd63807c3e656ead567aaec9f0e7d907 641 SMART SM00283 357 590 1.8E-66 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_18720 dd63807c3e656ead567aaec9f0e7d907 641 SUPERFAMILY SSF58104 324 591 2.49E-63 T 11-10-2018 AMS64_18720 dd63807c3e656ead567aaec9f0e7d907 641 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 183 5.9E-22 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMS64_18720 dd63807c3e656ead567aaec9f0e7d907 641 Gene3D G3DSA:1.20.1480.50 168 271 1.5E-12 T 11-10-2018 AMS64_18720 dd63807c3e656ead567aaec9f0e7d907 641 SMART SM00304 304 356 0.79 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_18720 dd63807c3e656ead567aaec9f0e7d907 641 SMART SM00304 212 264 8.7E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_18720 dd63807c3e656ead567aaec9f0e7d907 641 Pfam PF00672 HAMP domain 212 259 2.9E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_04910 4048e81b3638fa6ec29fb44501ee2f68 233 Pfam PF01569 PAP2 superfamily 87 202 1.7E-10 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMS64_04910 4048e81b3638fa6ec29fb44501ee2f68 233 SMART SM00014 85 205 2.1E-11 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMS64_04910 4048e81b3638fa6ec29fb44501ee2f68 233 Gene3D G3DSA:1.20.144.10 4 225 1.9E-6 T 11-10-2018 AMS64_04910 4048e81b3638fa6ec29fb44501ee2f68 233 SUPERFAMILY SSF48317 15 211 7.46E-18 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMS64_02210 685eb97636c18a3c535b97d12f57156d 277 SUPERFAMILY SSF53649 2 256 4.74E-45 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMS64_02210 685eb97636c18a3c535b97d12f57156d 277 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 208 1.9E-13 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AMS64_02210 685eb97636c18a3c535b97d12f57156d 277 Gene3D G3DSA:3.40.720.10 1 276 6.1E-32 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMS64_04930 670db573a24dcbfd7b766686b6d34319 156 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AMS64_04930 670db573a24dcbfd7b766686b6d34319 156 Gene3D G3DSA:1.20.1260.10 1 156 4.8E-53 T 11-10-2018 IPR012347 Ferritin-like AMS64_04930 670db573a24dcbfd7b766686b6d34319 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AMS64_04930 670db573a24dcbfd7b766686b6d34319 156 SUPERFAMILY SSF47240 1 155 3.2E-45 T 11-10-2018 IPR009078 Ferritin-like superfamily AMS64_04930 670db573a24dcbfd7b766686b6d34319 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 2.6E-12 T 11-10-2018 IPR002177 DNA-binding protein Dps AMS64_04930 670db573a24dcbfd7b766686b6d34319 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 2.6E-12 T 11-10-2018 IPR002177 DNA-binding protein Dps AMS64_04930 670db573a24dcbfd7b766686b6d34319 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 2.6E-12 T 11-10-2018 IPR002177 DNA-binding protein Dps AMS64_04930 670db573a24dcbfd7b766686b6d34319 156 PIRSF PIRSF005900 1 156 2.6E-44 T 11-10-2018 IPR002177 DNA-binding protein Dps AMS64_04930 670db573a24dcbfd7b766686b6d34319 156 Pfam PF00210 Ferritin-like domain 18 155 1.1E-26 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 233 301 2.3E-20 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 Gene3D G3DSA:3.40.190.10 12 215 3.0E-86 T 11-10-2018 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 PIRSF PIRSF001438 1 315 9.1E-124 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 Gene3D G3DSA:3.30.160.40 227 312 1.1E-29 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 SUPERFAMILY SSF53850 10 225 4.12E-87 T 11-10-2018 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 PRINTS PR00151 Porphobilinogen deaminase signature 236 253 2.2E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 PRINTS PR00151 Porphobilinogen deaminase signature 130 147 2.2E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 PRINTS PR00151 Porphobilinogen deaminase signature 51 71 2.2E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 PRINTS PR00151 Porphobilinogen deaminase signature 149 166 2.2E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 PRINTS PR00151 Porphobilinogen deaminase signature 82 101 2.2E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 12 303 2.7E-115 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 11 303 39.948 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 12 218 8.9E-81 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 Gene3D G3DSA:3.40.190.10 109 208 3.0E-86 T 11-10-2018 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 SUPERFAMILY SSF54782 227 313 3.01E-28 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02690 8c03a181b46f30cb2f549659bb35e837 315 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 237 253 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_20140 fcedcd1cd25a426ef54e244d5918ebf8 540 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 537 27.939 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMS64_20140 fcedcd1cd25a426ef54e244d5918ebf8 540 Pfam PF00795 Carbon-nitrogen hydrolase 10 240 1.9E-20 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMS64_20140 fcedcd1cd25a426ef54e244d5918ebf8 540 Gene3D G3DSA:3.40.50.620 264 539 1.1E-112 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_20140 fcedcd1cd25a426ef54e244d5918ebf8 540 PIRSF PIRSF006630 2 246 2.7E-71 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMS64_20140 fcedcd1cd25a426ef54e244d5918ebf8 540 PIRSF PIRSF006630 240 539 2.2E-123 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMS64_20140 fcedcd1cd25a426ef54e244d5918ebf8 540 SUPERFAMILY SSF56317 7 241 4.19E-55 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMS64_20140 fcedcd1cd25a426ef54e244d5918ebf8 540 SUPERFAMILY SSF52402 251 520 9.7E-78 T 11-10-2018 AMS64_20140 fcedcd1cd25a426ef54e244d5918ebf8 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 266 511 1.3E-59 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AMS64_20140 fcedcd1cd25a426ef54e244d5918ebf8 540 Gene3D G3DSA:3.60.110.10 1 263 1.9E-81 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMS64_20140 fcedcd1cd25a426ef54e244d5918ebf8 540 Pfam PF02540 NAD synthase 264 512 3.6E-71 T 11-10-2018 IPR022310 NAD/GMP synthase AMS64_12590 b627bed45a4c8696242be019938120c0 192 SUPERFAMILY SSF54862 37 175 2.28E-31 T 11-10-2018 AMS64_12590 b627bed45a4c8696242be019938120c0 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 3 181 8.9E-86 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AMS64_12590 b627bed45a4c8696242be019938120c0 192 Pfam PF04060 Putative Fe-S cluster 44 75 6.2E-14 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 AMS64_12590 b627bed45a4c8696242be019938120c0 192 Gene3D G3DSA:1.10.15.40 39 84 3.8E-7 T 11-10-2018 AMS64_12590 b627bed45a4c8696242be019938120c0 192 PIRSF PIRSF005784 3 189 7.3E-87 T 11-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AMS64_12590 b627bed45a4c8696242be019938120c0 192 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 168 25.135 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AMS64_12590 b627bed45a4c8696242be019938120c0 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_12590 b627bed45a4c8696242be019938120c0 192 Gene3D G3DSA:3.30.70.20 85 180 1.6E-20 T 11-10-2018 AMS64_12590 b627bed45a4c8696242be019938120c0 192 Pfam PF14697 4Fe-4S dicluster domain 109 163 9.9E-18 T 11-10-2018 AMS64_03510 a72ef483d8f1a586744670653459bc1c 381 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 381 59.804 T 11-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AMS64_03510 a72ef483d8f1a586744670653459bc1c 381 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 9 376 1.2E-133 T 11-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AMS64_03510 a72ef483d8f1a586744670653459bc1c 381 SUPERFAMILY SSF53187 5 380 4.57E-61 T 11-10-2018 AMS64_03510 a72ef483d8f1a586744670653459bc1c 381 Gene3D G3DSA:3.40.630.10 22 363 3.0E-83 T 11-10-2018 AMS64_03510 a72ef483d8f1a586744670653459bc1c 381 Pfam PF01546 Peptidase family M20/M25/M40 74 377 2.2E-32 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMS64_03510 a72ef483d8f1a586744670653459bc1c 381 Pfam PF07687 Peptidase dimerisation domain 175 282 6.2E-23 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AMS64_03510 a72ef483d8f1a586744670653459bc1c 381 SUPERFAMILY SSF55031 179 284 6.88E-19 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMS64_03510 a72ef483d8f1a586744670653459bc1c 381 Gene3D G3DSA:3.30.70.360 179 294 3.0E-83 T 11-10-2018 AMS64_03510 a72ef483d8f1a586744670653459bc1c 381 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMS64_03510 a72ef483d8f1a586744670653459bc1c 381 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 108 145 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMS64_01420 6d8769fd196e2f4709df9d91fd6d1da6 238 Gene3D G3DSA:3.40.190.10 100 194 2.2E-16 T 11-10-2018 AMS64_01420 6d8769fd196e2f4709df9d91fd6d1da6 238 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 20 217 4.6E-11 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_01420 6d8769fd196e2f4709df9d91fd6d1da6 238 SUPERFAMILY SSF53850 13 222 3.8E-21 T 11-10-2018 AMS64_01420 6d8769fd196e2f4709df9d91fd6d1da6 238 Gene3D G3DSA:3.40.190.10 20 221 2.2E-16 T 11-10-2018 AMS64_09320 3638b234f4ec1a675cd905ac8af730ac 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.841 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMS64_09320 3638b234f4ec1a675cd905ac8af730ac 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 6.3E-26 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMS64_09320 3638b234f4ec1a675cd905ac8af730ac 65 Pfam PF01632 Ribosomal protein L35 2 61 8.1E-23 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09320 3638b234f4ec1a675cd905ac8af730ac 65 SUPERFAMILY SSF143034 2 64 3.27E-23 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09320 3638b234f4ec1a675cd905ac8af730ac 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_09320 3638b234f4ec1a675cd905ac8af730ac 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 6.7E-20 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMS64_09320 3638b234f4ec1a675cd905ac8af730ac 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 6.7E-20 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMS64_09320 3638b234f4ec1a675cd905ac8af730ac 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.7E-20 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMS64_09320 3638b234f4ec1a675cd905ac8af730ac 65 Gene3D G3DSA:2.40.50.530 1 65 9.7E-23 T 11-10-2018 AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 271 4.1E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 Pfam PF00672 HAMP domain 164 207 1.0E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 SMART SM00388 211 272 3.2E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 Gene3D G3DSA:1.10.287.130 163 273 3.5E-23 T 11-10-2018 AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 Gene3D G3DSA:3.30.565.10 278 425 8.5E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 SMART SM00387 316 425 3.2E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 SUPERFAMILY SSF47384 196 272 2.75E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 3.9E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 3.9E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 365 3.9E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 379 3.9E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 423 3.3E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 SUPERFAMILY SSF55874 262 425 2.62E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_11225 9b0165a37374aa4f2cb9a7c8a0cc35ed 441 SMART SM00304 158 210 2.2E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_03240 1af646ddb0a31f8ef5932cf635524e02 427 SUPERFAMILY SSF53623 87 286 8.37E-53 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMS64_03240 1af646ddb0a31f8ef5932cf635524e02 427 Pfam PF02875 Mur ligase family, glutamate ligase domain 290 361 1.9E-8 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMS64_03240 1af646ddb0a31f8ef5932cf635524e02 427 Pfam PF08245 Mur ligase middle domain 102 269 2.2E-24 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMS64_03240 1af646ddb0a31f8ef5932cf635524e02 427 Gene3D G3DSA:3.40.1190.10 86 288 1.1E-66 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMS64_03240 1af646ddb0a31f8ef5932cf635524e02 427 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 1 427 32.456 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMS64_03240 1af646ddb0a31f8ef5932cf635524e02 427 SUPERFAMILY SSF53244 288 426 3.01E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMS64_03240 1af646ddb0a31f8ef5932cf635524e02 427 Gene3D G3DSA:3.40.50.720 1 85 2.1E-18 T 11-10-2018 AMS64_03240 1af646ddb0a31f8ef5932cf635524e02 427 Gene3D G3DSA:3.90.190.20 289 424 9.0E-40 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMS64_03240 1af646ddb0a31f8ef5932cf635524e02 427 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 2 425 3.5E-123 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMS64_03240 1af646ddb0a31f8ef5932cf635524e02 427 SUPERFAMILY SSF51984 2 86 5.49E-17 T 11-10-2018 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 Gene3D G3DSA:3.50.50.60 6 365 2.0E-132 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 SUPERFAMILY SSF51905 1 368 1.08E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 481 6.8E-9 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 1.9E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 79 91 1.9E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 1.9E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 1.9E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 1.9E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 1.9E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 Pfam PF01266 FAD dependent oxidoreductase 6 323 1.2E-46 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 SUPERFAMILY SSF54373 226 319 2.98E-5 T 11-10-2018 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 Gene3D G3DSA:3.30.9.10 83 320 2.0E-132 T 11-10-2018 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 Gene3D G3DSA:1.10.8.870 392 456 5.8E-13 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_12405 e0fc4505dacb44cc446e660ef2062623 495 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 10 27 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 Gene3D G3DSA:3.20.20.80 431 1028 1.2E-200 T 11-10-2018 AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 Gene3D G3DSA:2.60.40.1180 1029 1119 1.7E-26 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 SUPERFAMILY SSF49452 71 196 8.18E-23 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 Gene3D G3DSA:2.60.40.1130 197 310 2.9E-35 T 11-10-2018 AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 SUPERFAMILY SSF51011 997 1118 1.8E-28 T 11-10-2018 AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 Gene3D G3DSA:2.60.40.10 323 430 7.3E-28 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 Pfam PF03714 Bacterial pullanase-associated domain 105 195 1.1E-6 T 11-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 SUPERFAMILY SSF81296 201 322 7.14E-30 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 SUPERFAMILY SSF81296 332 434 9.4E-20 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 Pfam PF11852 Domain of unknown function (DUF3372) 938 1105 4.0E-46 T 11-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 SUPERFAMILY SSF51445 428 996 8.45E-137 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 332 416 2.6E-11 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 209 1106 0.0 T 11-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 AMS64_20505 67171336fc2e925454938f0b88ff8102 1371 Gene3D G3DSA:2.60.40.1110 65 196 1.6E-29 T 11-10-2018 AMS64_01140 3806e6265aed3ba11bbb1eef439802da 409 Gene3D G3DSA:1.10.150.130 47 147 1.2E-9 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_01140 3806e6265aed3ba11bbb1eef439802da 409 Pfam PF00589 Phage integrase family 193 332 4.7E-15 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_01140 3806e6265aed3ba11bbb1eef439802da 409 Gene3D G3DSA:1.10.443.10 166 391 2.4E-31 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_01140 3806e6265aed3ba11bbb1eef439802da 409 SUPERFAMILY SSF56349 175 389 1.18E-28 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_01140 3806e6265aed3ba11bbb1eef439802da 409 SUPERFAMILY SSF47823 47 145 1.96E-6 T 11-10-2018 AMS64_01140 3806e6265aed3ba11bbb1eef439802da 409 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 50 136 2.2E-7 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMS64_16075 4d50080f984a42cba3fd7e26ee11791d 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 3.9E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_16075 4d50080f984a42cba3fd7e26ee11791d 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 196 210 3.9E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_16075 4d50080f984a42cba3fd7e26ee11791d 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 35 50 3.9E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_16075 4d50080f984a42cba3fd7e26ee11791d 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 78 91 3.9E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_16075 4d50080f984a42cba3fd7e26ee11791d 254 SUPERFAMILY SSF53474 2 251 1.76E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_16075 4d50080f984a42cba3fd7e26ee11791d 254 Gene3D G3DSA:3.40.50.1820 2 251 3.7E-71 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_16075 4d50080f984a42cba3fd7e26ee11791d 254 Pfam PF12697 Alpha/beta hydrolase family 12 243 3.0E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 Gene3D G3DSA:3.30.70.3380 368 478 5.1E-40 T 11-10-2018 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 Gene3D G3DSA:3.30.70.2570 479 553 1.6E-34 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily AMS64_05475 21f38d48a59559de273e3d6041018db0 597 SUPERFAMILY SSF52540 2 232 1.58E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_05475 21f38d48a59559de273e3d6041018db0 597 Gene3D G3DSA:3.40.50.300 1 185 5.8E-72 T 11-10-2018 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 Pfam PF00679 Elongation factor G C-terminus 399 483 6.9E-20 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AMS64_05475 21f38d48a59559de273e3d6041018db0 597 SUPERFAMILY SSF54980 292 370 1.62E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like AMS64_05475 21f38d48a59559de273e3d6041018db0 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMS64_05475 21f38d48a59559de273e3d6041018db0 597 Gene3D G3DSA:3.30.70.870 286 367 1.2E-34 T 11-10-2018 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 SUPERFAMILY SSF54980 400 493 5.28E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like AMS64_05475 21f38d48a59559de273e3d6041018db0 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.2E-49 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal AMS64_05475 21f38d48a59559de273e3d6041018db0 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 172 3.8E-18 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.5E-53 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 3.2E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.864 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 Gene3D G3DSA:2.40.30.10 186 285 4.2E-34 T 11-10-2018 AMS64_05475 21f38d48a59559de273e3d6041018db0 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 5.4E-302 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AMS64_15345 ff9a4b3fffbb6b7f6b58620e67573fd7 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 414 498 7.3E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_15345 ff9a4b3fffbb6b7f6b58620e67573fd7 506 Gene3D G3DSA:3.30.565.10 376 499 3.7E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_15345 ff9a4b3fffbb6b7f6b58620e67573fd7 506 Pfam PF05231 MASE1 13 278 3.0E-10 T 11-10-2018 IPR007895 MASE1 AMS64_15345 ff9a4b3fffbb6b7f6b58620e67573fd7 506 Pfam PF07730 Histidine kinase 306 371 3.2E-12 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMS64_15345 ff9a4b3fffbb6b7f6b58620e67573fd7 506 SMART SM00387 410 500 2.2E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_15345 ff9a4b3fffbb6b7f6b58620e67573fd7 506 SUPERFAMILY SSF55874 386 497 4.85E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_17860 589d08e301e517ebf7960ddf5f650a96 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.7E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_17860 589d08e301e517ebf7960ddf5f650a96 290 Gene3D G3DSA:3.40.190.10 161 256 1.1E-35 T 11-10-2018 AMS64_17860 589d08e301e517ebf7960ddf5f650a96 290 Gene3D G3DSA:1.10.10.10 1 86 1.4E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_17860 589d08e301e517ebf7960ddf5f650a96 290 Gene3D G3DSA:3.40.190.10 91 281 1.1E-35 T 11-10-2018 AMS64_17860 589d08e301e517ebf7960ddf5f650a96 290 SUPERFAMILY SSF46785 1 87 2.45E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_17860 589d08e301e517ebf7960ddf5f650a96 290 Pfam PF03466 LysR substrate binding domain 88 286 9.3E-30 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_17860 589d08e301e517ebf7960ddf5f650a96 290 SUPERFAMILY SSF53850 89 288 9.59E-35 T 11-10-2018 AMS64_22575 0da96c78686eb9b2bd0faa799973c5f4 299 SUPERFAMILY SSF69593 22 289 2.75E-33 T 11-10-2018 AMS64_22575 0da96c78686eb9b2bd0faa799973c5f4 299 Pfam PF01553 Acyltransferase 77 230 4.8E-14 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMS64_22575 0da96c78686eb9b2bd0faa799973c5f4 299 SMART SM00563 89 231 2.8E-21 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMS64_12085 0dc07aac0dd2ed53d706d7eae26675d8 312 Pfam PF01343 Peptidase family S49 142 286 2.4E-31 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMS64_12085 0dc07aac0dd2ed53d706d7eae26675d8 312 Gene3D G3DSA:3.90.226.10 86 283 2.2E-45 T 11-10-2018 AMS64_12085 0dc07aac0dd2ed53d706d7eae26675d8 312 SUPERFAMILY SSF52096 69 279 3.56E-31 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_12085 0dc07aac0dd2ed53d706d7eae26675d8 312 Gene3D G3DSA:3.40.1750.20 182 248 2.2E-45 T 11-10-2018 AMS64_04275 68747f387c9b89ded3618b09461532f5 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 248 44.504 T 11-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AMS64_04275 68747f387c9b89ded3618b09461532f5 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 78 1.2E-19 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMS64_04275 68747f387c9b89ded3618b09461532f5 249 Pfam PF00588 SpoU rRNA Methylase family 101 241 1.2E-40 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMS64_04275 68747f387c9b89ded3618b09461532f5 249 Gene3D G3DSA:3.40.1280.10 83 248 1.5E-64 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMS64_04275 68747f387c9b89ded3618b09461532f5 249 SUPERFAMILY SSF55315 3 77 2.94E-19 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AMS64_04275 68747f387c9b89ded3618b09461532f5 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 3 247 2.6E-87 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AMS64_04275 68747f387c9b89ded3618b09461532f5 249 SMART SM00967 5 81 2.3E-21 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMS64_04275 68747f387c9b89ded3618b09461532f5 249 SUPERFAMILY SSF75217 97 248 9.16E-50 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMS64_04275 68747f387c9b89ded3618b09461532f5 249 Gene3D G3DSA:3.30.1330.30 1 77 6.2E-27 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AMS64_06510 85830de68c29b9fecd428d06b88e21e9 625 Gene3D G3DSA:1.10.287.950 294 625 3.2E-72 T 11-10-2018 AMS64_06510 85830de68c29b9fecd428d06b88e21e9 625 SUPERFAMILY SSF58104 316 625 3.66E-77 T 11-10-2018 AMS64_06510 85830de68c29b9fecd428d06b88e21e9 625 Gene3D G3DSA:3.30.450.20 55 267 2.7E-60 T 11-10-2018 AMS64_06510 85830de68c29b9fecd428d06b88e21e9 625 SUPERFAMILY SSF103190 74 174 2.35E-16 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMS64_06510 85830de68c29b9fecd428d06b88e21e9 625 SMART SM00283 359 624 9.1E-66 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_06510 85830de68c29b9fecd428d06b88e21e9 625 Gene3D G3DSA:3.30.450.20 64 168 2.7E-60 T 11-10-2018 AMS64_06510 85830de68c29b9fecd428d06b88e21e9 625 SMART SM00304 294 348 1.4E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_06510 85830de68c29b9fecd428d06b88e21e9 625 Pfam PF02743 Cache domain 76 254 1.2E-25 T 11-10-2018 IPR033479 Double Cache domain 1 AMS64_06510 85830de68c29b9fecd428d06b88e21e9 625 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 591 1.8E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_06510 85830de68c29b9fecd428d06b88e21e9 625 Pfam PF00672 HAMP domain 295 344 1.4E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SUPERFAMILY SSF81901 427 578 2.96E-41 T 11-10-2018 AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Gene3D G3DSA:1.25.40.10 308 425 1.2E-44 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Gene3D G3DSA:1.25.40.10 191 307 1.1E-45 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Gene3D G3DSA:1.25.40.10 426 573 8.6E-52 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Gene3D G3DSA:1.25.40.10 6 176 2.6E-58 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Gene3D G3DSA:1.25.40.10 586 716 3.8E-39 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SUPERFAMILY SSF81901 557 681 7.59E-39 T 11-10-2018 AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 643 678 1.4E-10 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 571 606 1.7E-12 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 463 498 9.5E-13 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 382 417 3.3E-11 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 238 273 3.0E-12 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 202 237 1.1E-12 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 499 534 4.0E-14 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 58 93 9.3E-11 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 346 381 4.7E-12 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 535 570 3.4E-14 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 310 345 9.5E-13 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 274 309 9.3E-9 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 607 642 5.1E-11 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 166 201 6.0E-13 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 94 129 9.1E-12 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 130 165 1.1E-10 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SMART SM00671 22 57 1.9E-10 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SUPERFAMILY SSF81901 148 317 6.71E-53 T 11-10-2018 AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 238 273 1.8E-9 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 382 417 1.1E-8 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 535 570 1.4E-11 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 571 606 4.1E-11 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 275 309 2.6E-6 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 311 345 5.0E-9 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 131 165 7.0E-8 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 643 678 2.0E-7 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 25 57 8.0E-7 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 607 642 1.3E-8 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 95 129 2.9E-10 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 202 237 2.7E-9 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 59 93 3.8E-7 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 500 534 2.3E-12 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 167 201 6.0E-10 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 346 381 3.5E-9 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 Pfam PF08238 Sel1 repeat 463 498 5.9E-9 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SUPERFAMILY SSF81901 259 435 6.45E-49 T 11-10-2018 AMS64_14875 88a15fa3e9e3b4331f4556c0a35cd0b7 716 SUPERFAMILY SSF81901 7 165 1.13E-45 T 11-10-2018 AMS64_13540 8de889d8dcb6bd8a3acd6a860663dfde 304 Pfam PF01933 Uncharacterised protein family UPF0052 12 290 6.1E-74 T 11-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AMS64_13540 8de889d8dcb6bd8a3acd6a860663dfde 304 SUPERFAMILY SSF142338 11 293 1.44E-82 T 11-10-2018 AMS64_13540 8de889d8dcb6bd8a3acd6a860663dfde 304 Gene3D G3DSA:3.40.50.12300 9 300 3.8E-78 T 11-10-2018 IPR038136 Gluconeogenesis factor superfamily AMS64_13540 8de889d8dcb6bd8a3acd6a860663dfde 304 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 256 2.3E-93 T 11-10-2018 IPR010119 Gluconeogenesis factor AMS64_13540 8de889d8dcb6bd8a3acd6a860663dfde 304 Hamap MF_00973 Gluconeogenesis factor. 8 299 31.119 T 11-10-2018 IPR010119 Gluconeogenesis factor AMS64_01840 3004ec1329c6b6faebbdc3185e4eba92 449 Pfam PF13091 PLD-like domain 37 149 3.1E-6 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AMS64_01840 3004ec1329c6b6faebbdc3185e4eba92 449 Pfam PF13091 PLD-like domain 257 392 1.5E-19 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AMS64_01840 3004ec1329c6b6faebbdc3185e4eba92 449 SUPERFAMILY SSF56024 246 423 9.42E-21 T 11-10-2018 AMS64_01840 3004ec1329c6b6faebbdc3185e4eba92 449 SUPERFAMILY SSF56024 18 200 5.65E-28 T 11-10-2018 AMS64_01840 3004ec1329c6b6faebbdc3185e4eba92 449 Gene3D G3DSA:3.30.870.10 15 444 5.3E-164 T 11-10-2018 AMS64_01840 3004ec1329c6b6faebbdc3185e4eba92 449 Gene3D G3DSA:3.30.870.10 21 228 5.3E-164 T 11-10-2018 AMS64_01840 3004ec1329c6b6faebbdc3185e4eba92 449 SMART SM00155 129 155 0.13 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMS64_01840 3004ec1329c6b6faebbdc3185e4eba92 449 SMART SM00155 350 377 0.041 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMS64_01840 3004ec1329c6b6faebbdc3185e4eba92 449 PIRSF PIRSF000850 2 449 7.7E-186 T 11-10-2018 AMS64_20660 5acd201ce0a13f312054b09acd8a66df 333 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 147 155 - T 11-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 AMS64_20660 5acd201ce0a13f312054b09acd8a66df 333 Gene3D G3DSA:3.40.190.10 29 297 1.2E-131 T 11-10-2018 AMS64_20660 5acd201ce0a13f312054b09acd8a66df 333 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 50 62 - T 11-10-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site AMS64_20660 5acd201ce0a13f312054b09acd8a66df 333 SUPERFAMILY SSF53850 23 330 1.63E-86 T 11-10-2018 AMS64_20660 5acd201ce0a13f312054b09acd8a66df 333 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 21 328 1.6E-142 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AMS64_20660 5acd201ce0a13f312054b09acd8a66df 333 Pfam PF13531 Bacterial extracellular solute-binding protein 43 282 3.7E-43 T 11-10-2018 AMS64_20660 5acd201ce0a13f312054b09acd8a66df 333 Gene3D G3DSA:3.40.190.10 116 327 1.2E-131 T 11-10-2018 AMS64_09675 79b6fee2805bb230e322377d53112238 395 SUPERFAMILY SSF52151 3 333 4.19E-44 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMS64_09675 79b6fee2805bb230e322377d53112238 395 Pfam PF01734 Patatin-like phospholipase 7 219 6.4E-25 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMS64_09675 79b6fee2805bb230e322377d53112238 395 Gene3D G3DSA:3.40.1090.10 118 269 5.3E-17 T 11-10-2018 AMS64_09675 79b6fee2805bb230e322377d53112238 395 Gene3D G3DSA:3.40.1090.10 2 101 4.5E-12 T 11-10-2018 AMS64_02845 085b39b30153b8cdebd293c63c039582 90 Gene3D G3DSA:3.30.1340.10 1 85 1.2E-29 T 11-10-2018 IPR035895 HPr-like superfamily AMS64_02845 085b39b30153b8cdebd293c63c039582 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 83 4.0E-23 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_02845 085b39b30153b8cdebd293c63c039582 90 SUPERFAMILY SSF55594 4 90 2.62E-24 T 11-10-2018 IPR035895 HPr-like superfamily AMS64_02845 085b39b30153b8cdebd293c63c039582 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 7.6E-11 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_02845 085b39b30153b8cdebd293c63c039582 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 7.6E-11 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_02845 085b39b30153b8cdebd293c63c039582 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 7.6E-11 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_02845 085b39b30153b8cdebd293c63c039582 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AMS64_02845 085b39b30153b8cdebd293c63c039582 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 1.1E-23 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_02845 085b39b30153b8cdebd293c63c039582 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMS64_05715 7dae43211a951cbfb1fdbcaebcb3d48e 299 Pfam PF00072 Response regulator receiver domain 172 286 5.4E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_05715 7dae43211a951cbfb1fdbcaebcb3d48e 299 SUPERFAMILY SSF50341 8 148 1.18E-33 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMS64_05715 7dae43211a951cbfb1fdbcaebcb3d48e 299 SMART SM00448 170 287 3.8E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_05715 7dae43211a951cbfb1fdbcaebcb3d48e 299 Gene3D G3DSA:2.30.30.40 18 138 1.0E-27 T 11-10-2018 AMS64_05715 7dae43211a951cbfb1fdbcaebcb3d48e 299 Gene3D G3DSA:2.40.50.180 28 143 1.0E-27 T 11-10-2018 AMS64_05715 7dae43211a951cbfb1fdbcaebcb3d48e 299 PIRSF PIRSF002867 1 295 7.1E-85 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AMS64_05715 7dae43211a951cbfb1fdbcaebcb3d48e 299 SMART SM00260 6 144 1.8E-19 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_05715 7dae43211a951cbfb1fdbcaebcb3d48e 299 SUPERFAMILY SSF52172 167 291 3.56E-24 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_05715 7dae43211a951cbfb1fdbcaebcb3d48e 299 Pfam PF01584 CheW-like domain 11 146 2.6E-32 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_05715 7dae43211a951cbfb1fdbcaebcb3d48e 299 Gene3D G3DSA:3.40.50.2300 160 294 1.8E-24 T 11-10-2018 AMS64_06420 e4dcf2d3a77ea5fc7d04b9708468ffc8 210 SUPERFAMILY SSF48452 60 182 2.78E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_06420 e4dcf2d3a77ea5fc7d04b9708468ffc8 210 Gene3D G3DSA:1.25.40.10 90 208 1.1E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_06420 e4dcf2d3a77ea5fc7d04b9708468ffc8 210 Pfam PF14559 Tetratricopeptide repeat 137 186 3.4E-6 T 11-10-2018 AMS64_04095 4576f0c342f90edf03d11ac52d275c57 220 Pfam PF04012 PspA/IM30 family 2 218 6.2E-36 T 11-10-2018 IPR007157 PspA/IM30 AMS64_04095 4576f0c342f90edf03d11ac52d275c57 220 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 217 5.9E-82 T 11-10-2018 IPR014319 Phage shock protein, PspA AMS64_20695 13aff46839f1fe519f24dd2c7ccccb7c 270 Gene3D G3DSA:3.40.190.80 157 261 1.5E-27 T 11-10-2018 AMS64_20695 13aff46839f1fe519f24dd2c7ccccb7c 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 214 238 6.3E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_20695 13aff46839f1fe519f24dd2c7ccccb7c 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 6.3E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_20695 13aff46839f1fe519f24dd2c7ccccb7c 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 6.3E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_20695 13aff46839f1fe519f24dd2c7ccccb7c 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 6.3E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_20695 13aff46839f1fe519f24dd2c7ccccb7c 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 6.3E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_20695 13aff46839f1fe519f24dd2c7ccccb7c 270 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 217 231 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AMS64_20695 13aff46839f1fe519f24dd2c7ccccb7c 270 SUPERFAMILY SSF56655 11 264 1.31E-71 T 11-10-2018 AMS64_20695 13aff46839f1fe519f24dd2c7ccccb7c 270 Pfam PF00459 Inositol monophosphatase family 13 247 4.7E-51 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_20695 13aff46839f1fe519f24dd2c7ccccb7c 270 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 7 259 37.261 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AMS64_20695 13aff46839f1fe519f24dd2c7ccccb7c 270 Gene3D G3DSA:3.30.540.10 8 156 1.5E-41 T 11-10-2018 AMS64_20695 13aff46839f1fe519f24dd2c7ccccb7c 270 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 9 257 2.4E-88 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AMS64_11490 537da068635211e898ad1ae8aae52984 336 SUPERFAMILY SSF54862 153 232 1.93E-18 T 11-10-2018 AMS64_11490 537da068635211e898ad1ae8aae52984 336 Gene3D G3DSA:3.30.70.20 170 233 6.3E-13 T 11-10-2018 AMS64_11490 537da068635211e898ad1ae8aae52984 336 PRINTS PR00397 Sirohaem Fe-binding site signature 151 169 4.4E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_11490 537da068635211e898ad1ae8aae52984 336 PRINTS PR00397 Sirohaem Fe-binding site signature 110 128 4.4E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_11490 537da068635211e898ad1ae8aae52984 336 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 212 223 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_11490 537da068635211e898ad1ae8aae52984 336 Gene3D G3DSA:3.90.480.20 5 99 1.6E-10 T 11-10-2018 AMS64_11490 537da068635211e898ad1ae8aae52984 336 SUPERFAMILY SSF56014 110 327 1.44E-32 T 11-10-2018 AMS64_11490 537da068635211e898ad1ae8aae52984 336 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 23 82 2.4E-13 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_11490 537da068635211e898ad1ae8aae52984 336 Pfam PF14697 4Fe-4S dicluster domain 175 224 1.3E-9 T 11-10-2018 AMS64_11490 537da068635211e898ad1ae8aae52984 336 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 110 303 5.0E-20 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_11490 537da068635211e898ad1ae8aae52984 336 SUPERFAMILY SSF55124 18 83 3.6E-16 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_11490 537da068635211e898ad1ae8aae52984 336 TIGRFAM TIGR02912 sulfite_red_C: sulfite reductase, subunit C 4 321 2.2E-144 T 11-10-2018 IPR014261 Sulphite reductase, subunit C AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 3.7E-101 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.5E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.5E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.5E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 182 5.9E-5 T 11-10-2018 AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 SUPERFAMILY SSF51735 5 243 1.66E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 Gene3D G3DSA:3.40.50.720 1 244 8.9E-89 T 11-10-2018 AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 3.2E-69 T 11-10-2018 AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 6.4E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.4E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.4E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.4E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 6.4E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09810 441962de0ac5b7072583c0e46fb06743 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.4E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_12525 9e1baf8c6ca9810bc7a463d2f614b095 152 SUPERFAMILY SSF55729 1 148 2.66E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_12525 9e1baf8c6ca9810bc7a463d2f614b095 152 Gene3D G3DSA:3.40.630.30 3 152 1.0E-36 T 11-10-2018 AMS64_12525 9e1baf8c6ca9810bc7a463d2f614b095 152 Pfam PF00583 Acetyltransferase (GNAT) family 26 143 4.1E-19 T 11-10-2018 IPR000182 GNAT domain AMS64_07585 c24266be2c1b9ddd6727c8d0f7221af6 204 SUPERFAMILY SSF101322 3 203 5.89E-77 T 11-10-2018 IPR035932 HflD-like superfamily AMS64_07585 c24266be2c1b9ddd6727c8d0f7221af6 204 Pfam PF04356 Protein of unknown function (DUF489) 7 198 1.2E-76 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD AMS64_07585 c24266be2c1b9ddd6727c8d0f7221af6 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 204 34.825 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD AMS64_07585 c24266be2c1b9ddd6727c8d0f7221af6 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 1.0E-58 T 11-10-2018 AMS64_07585 c24266be2c1b9ddd6727c8d0f7221af6 204 Gene3D G3DSA:1.10.3890.10 1 204 7.6E-75 T 11-10-2018 IPR035932 HflD-like superfamily AMS64_03705 e96982bad3030f77ac20bdd7333ed428 105 PIRSF PIRSF028773 1 105 1.3E-47 T 11-10-2018 IPR007458 Protein of unknown function DUF496 AMS64_03705 e96982bad3030f77ac20bdd7333ed428 105 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 24.356 T 11-10-2018 IPR007458 Protein of unknown function DUF496 AMS64_03705 e96982bad3030f77ac20bdd7333ed428 105 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 99 6.0E-37 T 11-10-2018 IPR007458 Protein of unknown function DUF496 AMS64_03705 e96982bad3030f77ac20bdd7333ed428 105 Pfam PF04363 Protein of unknown function (DUF496) 9 99 1.3E-44 T 11-10-2018 IPR007458 Protein of unknown function DUF496 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 SUPERFAMILY SSF53671 1 302 2.62E-88 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 300 8.3E-98 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 140 2.4E-42 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 Gene3D G3DSA:3.40.50.1370 3 129 1.8E-100 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 Gene3D G3DSA:3.40.50.1370 130 296 1.8E-100 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 147 298 1.8E-45 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 3.2E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 3.2E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 3.2E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 279 290 1.3E-22 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 76 89 1.3E-22 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 43 57 1.3E-22 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 116 130 1.3E-22 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMS64_03495 bde5f74816ad7bdda28ac8eb895098b4 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 218 228 1.3E-22 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMS64_08260 7adbcc8f5b15710e6fb1e2ec688e44fc 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_08260 7adbcc8f5b15710e6fb1e2ec688e44fc 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 111 3.1E-30 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08260 7adbcc8f5b15710e6fb1e2ec688e44fc 238 SUPERFAMILY SSF54292 1 106 5.97E-30 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMS64_08260 7adbcc8f5b15710e6fb1e2ec688e44fc 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 3.5E-10 T 11-10-2018 AMS64_08260 7adbcc8f5b15710e6fb1e2ec688e44fc 238 SUPERFAMILY SSF46548 107 234 3.66E-40 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_08260 7adbcc8f5b15710e6fb1e2ec688e44fc 238 Gene3D G3DSA:1.10.1060.10 107 238 4.7E-57 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_08260 7adbcc8f5b15710e6fb1e2ec688e44fc 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 1.3E-85 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08260 7adbcc8f5b15710e6fb1e2ec688e44fc 238 Gene3D G3DSA:3.10.20.30 1 106 2.8E-33 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_06460 88f9e3cc717702b1c0c8565ff48fefa5 197 SUPERFAMILY SSF46689 3 70 3.44E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_06460 88f9e3cc717702b1c0c8565ff48fefa5 197 Gene3D G3DSA:1.10.357.10 5 192 1.7E-39 T 11-10-2018 AMS64_06460 88f9e3cc717702b1c0c8565ff48fefa5 197 SUPERFAMILY SSF48498 80 190 1.98E-14 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMS64_06460 88f9e3cc717702b1c0c8565ff48fefa5 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 51 1.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_06460 88f9e3cc717702b1c0c8565ff48fefa5 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 9.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_06460 88f9e3cc717702b1c0c8565ff48fefa5 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 9.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_06460 88f9e3cc717702b1c0c8565ff48fefa5 197 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 80 182 5.7E-16 T 11-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AMS64_16940 1846d52e59ee6481d6a251466ae3dbe1 587 SUPERFAMILY SSF52540 7 279 1.72E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_16940 1846d52e59ee6481d6a251466ae3dbe1 587 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 8 572 2.6E-274 T 11-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 AMS64_16940 1846d52e59ee6481d6a251466ae3dbe1 587 Gene3D G3DSA:3.40.50.300 3 296 7.3E-82 T 11-10-2018 AMS64_16940 1846d52e59ee6481d6a251466ae3dbe1 587 SUPERFAMILY SSF52540 317 578 3.78E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_16940 1846d52e59ee6481d6a251466ae3dbe1 587 Gene3D G3DSA:3.40.50.300 311 584 7.0E-71 T 11-10-2018 AMS64_16940 1846d52e59ee6481d6a251466ae3dbe1 587 PIRSF PIRSF001327 1 587 2.4E-266 T 11-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 AMS64_16940 1846d52e59ee6481d6a251466ae3dbe1 587 Pfam PF02374 Anion-transporting ATPase 330 474 3.6E-29 T 11-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 AMS64_16940 1846d52e59ee6481d6a251466ae3dbe1 587 Pfam PF02374 Anion-transporting ATPase 11 293 4.4E-75 T 11-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 AMS64_16940 1846d52e59ee6481d6a251466ae3dbe1 587 SMART SM00382 327 520 0.047 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_16940 1846d52e59ee6481d6a251466ae3dbe1 587 SMART SM00382 8 227 0.64 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_16940 1846d52e59ee6481d6a251466ae3dbe1 587 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 13 293 1.7E-80 T 11-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 SUPERFAMILY SSF110942 523 635 1.44E-37 T 11-10-2018 IPR037196 HSP90, C-terminal domain AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 SUPERFAMILY SSF55874 7 217 4.58E-66 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 PIRSF PIRSF002583 2 637 2.0E-220 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 SMART SM00387 30 187 1.2E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 186 1.8E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 Gene3D G3DSA:3.30.565.10 1 231 4.6E-77 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 PRINTS PR00775 90kDa heat shock protein signature 78 95 1.1E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 PRINTS PR00775 90kDa heat shock protein signature 96 113 1.1E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 PRINTS PR00775 90kDa heat shock protein signature 123 145 1.1E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 PRINTS PR00775 90kDa heat shock protein signature 193 211 1.1E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 PRINTS PR00775 90kDa heat shock protein signature 29 51 1.1E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 PRINTS PR00775 90kDa heat shock protein signature 175 192 1.1E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 PRINTS PR00775 90kDa heat shock protein signature 8 28 1.1E-61 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 635 32.755 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 SUPERFAMILY SSF54211 241 496 1.06E-101 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 Gene3D G3DSA:3.30.230.80 240 407 1.4E-71 T 11-10-2018 AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 Gene3D G3DSA:1.20.120.790 503 636 5.8E-46 T 11-10-2018 IPR037196 HSP90, C-terminal domain AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 Gene3D G3DSA:3.40.50.11260 408 497 1.4E-34 T 11-10-2018 AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 Pfam PF00183 Hsp90 protein 226 635 1.2E-134 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AMS64_07940 eb177b65b43e75df2a5a5f5a6ffe8c5e 637 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 AMS64_19585 65519c44647e60110714b631f4b0e507 303 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 277 5.7E-116 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AMS64_19585 65519c44647e60110714b631f4b0e507 303 Gene3D G3DSA:3.90.550.10 4 303 4.0E-88 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_19585 65519c44647e60110714b631f4b0e507 303 Pfam PF00483 Nucleotidyl transferase 11 280 1.2E-25 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMS64_19585 65519c44647e60110714b631f4b0e507 303 SUPERFAMILY SSF53448 8 289 9.69E-61 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_08290 a20625d9288ec43251e0f8db9b4de955 578 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 38 577 3.1E-222 T 11-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative AMS64_08290 a20625d9288ec43251e0f8db9b4de955 578 SUPERFAMILY SSF161098 35 289 1.44E-48 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_08290 a20625d9288ec43251e0f8db9b4de955 578 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 397 567 6.4E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_08290 a20625d9288ec43251e0f8db9b4de955 578 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 286 3.4E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_08290 a20625d9288ec43251e0f8db9b4de955 578 SUPERFAMILY SSF161098 310 564 5.78E-34 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_08290 a20625d9288ec43251e0f8db9b4de955 578 Gene3D G3DSA:1.10.3720.10 314 571 3.1E-34 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_08290 a20625d9288ec43251e0f8db9b4de955 578 Gene3D G3DSA:1.10.3720.10 33 298 4.1E-52 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_13005 09b31ef4371d312b0eac22184d765cbc 320 SUPERFAMILY SSF81324 221 319 1.19E-14 T 11-10-2018 AMS64_13005 09b31ef4371d312b0eac22184d765cbc 320 SUPERFAMILY SSF141571 49 136 7.19E-14 T 11-10-2018 AMS64_13005 09b31ef4371d312b0eac22184d765cbc 320 Pfam PF00805 Pentapeptide repeats (8 copies) 97 123 0.01 T 11-10-2018 IPR001646 Pentapeptide repeat AMS64_13005 09b31ef4371d312b0eac22184d765cbc 320 Gene3D G3DSA:1.10.287.70 209 320 6.4E-15 T 11-10-2018 AMS64_13005 09b31ef4371d312b0eac22184d765cbc 320 Pfam PF07885 Ion channel 230 319 5.4E-12 T 11-10-2018 IPR013099 Potassium channel domain AMS64_13005 09b31ef4371d312b0eac22184d765cbc 320 Gene3D G3DSA:2.160.20.80 19 175 1.4E-13 T 11-10-2018 AMS64_05490 eb793c41fd3ef4685d8888bd60247d5f 299 Hamap MF_00367 GTPase Era [era]. 5 296 36.039 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_05490 eb793c41fd3ef4685d8888bd60247d5f 299 Pfam PF07650 KH domain 208 284 9.7E-20 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_05490 eb793c41fd3ef4685d8888bd60247d5f 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 8 279 2.6E-114 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_05490 eb793c41fd3ef4685d8888bd60247d5f 299 SUPERFAMILY SSF54814 181 296 4.25E-44 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMS64_05490 eb793c41fd3ef4685d8888bd60247d5f 299 Gene3D G3DSA:3.30.300.20 185 299 5.5E-44 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMS64_05490 eb793c41fd3ef4685d8888bd60247d5f 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 166 1.8E-36 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_05490 eb793c41fd3ef4685d8888bd60247d5f 299 SUPERFAMILY SSF52540 10 205 2.8E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_05490 eb793c41fd3ef4685d8888bd60247d5f 299 Pfam PF01926 50S ribosome-binding GTPase 10 124 1.2E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_05490 eb793c41fd3ef4685d8888bd60247d5f 299 Gene3D G3DSA:3.40.50.300 2 183 2.3E-51 T 11-10-2018 AMS64_15920 5e02c52427201c703393259d69865358 328 Gene3D G3DSA:3.40.50.970 1 189 1.8E-74 T 11-10-2018 AMS64_15920 5e02c52427201c703393259d69865358 328 SUPERFAMILY SSF52922 191 323 8.11E-35 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMS64_15920 5e02c52427201c703393259d69865358 328 SMART SM00861 4 179 1.3E-63 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMS64_15920 5e02c52427201c703393259d69865358 328 Gene3D G3DSA:3.40.50.920 190 325 1.3E-41 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMS64_15920 5e02c52427201c703393259d69865358 328 Pfam PF02780 Transketolase, C-terminal domain 199 315 3.0E-33 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AMS64_15920 5e02c52427201c703393259d69865358 328 SUPERFAMILY SSF52518 3 190 2.59E-65 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_15920 5e02c52427201c703393259d69865358 328 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 4.4E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMS64_10590 103f0a24f81656af82795a1a24bcb8c0 305 Pfam PF13737 Transposase DDE domain 19 130 5.8E-37 T 11-10-2018 IPR025668 Transposase DDE domain AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 543 576 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 Gene3D G3DSA:3.30.1370.120 262 351 7.2E-18 T 11-10-2018 IPR038591 NolW-like superfamily AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 Gene3D G3DSA:3.30.1370.120 190 261 2.5E-18 T 11-10-2018 IPR038591 NolW-like superfamily AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 Pfam PF03958 Bacterial type II/III secretion system short domain 127 190 4.8E-12 T 11-10-2018 IPR005644 NolW-like AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 Pfam PF03958 Bacterial type II/III secretion system short domain 269 350 1.0E-19 T 11-10-2018 IPR005644 NolW-like AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 Pfam PF03958 Bacterial type II/III secretion system short domain 193 261 2.0E-13 T 11-10-2018 IPR005644 NolW-like AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 31 604 7.4E-173 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 Pfam PF00263 Bacterial type II and III secretion system protein 432 598 4.1E-55 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 Gene3D G3DSA:3.30.1370.120 21 187 3.9E-54 T 11-10-2018 IPR038591 NolW-like superfamily AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 PRINTS PR00811 Bacterial general secretion pathway protein D signature 350 360 3.3E-41 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 PRINTS PR00811 Bacterial general secretion pathway protein D signature 428 452 3.3E-41 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 PRINTS PR00811 Bacterial general secretion pathway protein D signature 585 599 3.3E-41 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 PRINTS PR00811 Bacterial general secretion pathway protein D signature 463 473 3.3E-41 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_17220 bd1e0b70258142ed28746deb8054357e 679 PRINTS PR00811 Bacterial general secretion pathway protein D signature 562 580 3.3E-41 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_05065 486c929a331098a5bcacdf6a2a4827db 232 Gene3D G3DSA:3.40.50.1860 104 215 7.1E-84 T 11-10-2018 AMS64_05065 486c929a331098a5bcacdf6a2a4827db 232 SUPERFAMILY SSF53681 1 116 8.83E-36 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMS64_05065 486c929a331098a5bcacdf6a2a4827db 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 5.5E-70 T 11-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AMS64_05065 486c929a331098a5bcacdf6a2a4827db 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 2.1E-61 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMS64_05065 486c929a331098a5bcacdf6a2a4827db 232 Gene3D G3DSA:3.40.50.1860 4 224 7.1E-84 T 11-10-2018 AMS64_05065 486c929a331098a5bcacdf6a2a4827db 232 SUPERFAMILY SSF53681 119 228 3.27E-33 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMS64_12665 585e0e2f4c655276c1ff74faafe42886 270 PIRSF PIRSF000161 3 270 9.7E-87 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_12665 585e0e2f4c655276c1ff74faafe42886 270 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 268 34.533 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_12665 585e0e2f4c655276c1ff74faafe42886 270 SUPERFAMILY SSF51735 3 269 2.29E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_12665 585e0e2f4c655276c1ff74faafe42886 270 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 128 6.2E-40 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_12665 585e0e2f4c655276c1ff74faafe42886 270 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 153 170 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_12665 585e0e2f4c655276c1ff74faafe42886 270 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 267 1.0E-101 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_12665 585e0e2f4c655276c1ff74faafe42886 270 Gene3D G3DSA:3.30.360.10 130 237 3.1E-100 T 11-10-2018 AMS64_12665 585e0e2f4c655276c1ff74faafe42886 270 Gene3D G3DSA:3.40.50.720 6 267 3.1E-100 T 11-10-2018 AMS64_12665 585e0e2f4c655276c1ff74faafe42886 270 SUPERFAMILY SSF55347 130 239 1.33E-37 T 11-10-2018 AMS64_12665 585e0e2f4c655276c1ff74faafe42886 270 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 131 267 6.9E-42 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 SUPERFAMILY SSF53335 74 269 1.62E-48 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 PRINTS PR00996 Glutamate methyltransferase family signature 211 225 5.7E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 PRINTS PR00996 Glutamate methyltransferase family signature 230 253 5.7E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 5.7E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 5.7E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 PRINTS PR00996 Glutamate methyltransferase family signature 67 79 5.7E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 PRINTS PR00996 Glutamate methyltransferase family signature 28 41 5.7E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 52 4.4E-10 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 SUPERFAMILY SSF47757 3 73 1.83E-13 T 11-10-2018 AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 Pfam PF01739 CheR methyltransferase, SAM binding domain 74 268 1.5E-62 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 Gene3D G3DSA:1.10.155.10 1 72 2.7E-8 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 Gene3D G3DSA:3.40.50.150 73 273 7.7E-59 T 11-10-2018 AMS64_15810 ae6943dcca63377564d38f7367fa9326 274 SMART SM00138 6 271 6.8E-110 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMS64_20090 2b3eb7bb86a1b35bc8dcc40eeb325792 402 SUPERFAMILY SSF143856 115 231 2.35E-50 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AMS64_20090 2b3eb7bb86a1b35bc8dcc40eeb325792 402 Pfam PF01676 Metalloenzyme superfamily 2 393 5.9E-40 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AMS64_20090 2b3eb7bb86a1b35bc8dcc40eeb325792 402 PIRSF PIRSF001491 1 402 4.1E-161 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AMS64_20090 2b3eb7bb86a1b35bc8dcc40eeb325792 402 SUPERFAMILY SSF53649 1 402 4.84E-73 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMS64_20090 2b3eb7bb86a1b35bc8dcc40eeb325792 402 Gene3D G3DSA:3.30.70.1250 113 234 5.0E-153 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AMS64_20090 2b3eb7bb86a1b35bc8dcc40eeb325792 402 Gene3D G3DSA:3.40.720.10 3 402 5.0E-153 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMS64_20090 2b3eb7bb86a1b35bc8dcc40eeb325792 402 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 400 2.8E-172 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AMS64_20090 2b3eb7bb86a1b35bc8dcc40eeb325792 402 Hamap MF_00740 Phosphopentomutase [deoB]. 1 402 54.301 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AMS64_17630 545dc08c34fe12046804507321350a44 668 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 317 2.3E-125 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AMS64_17630 545dc08c34fe12046804507321350a44 668 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 593 664 8.0E-14 T 11-10-2018 IPR001357 BRCT domain AMS64_17630 545dc08c34fe12046804507321350a44 668 SUPERFAMILY SSF56091 2 315 9.5E-118 T 11-10-2018 AMS64_17630 545dc08c34fe12046804507321350a44 668 SUPERFAMILY SSF50249 317 398 1.2E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_17630 545dc08c34fe12046804507321350a44 668 PIRSF PIRSF001604 1 668 7.2E-244 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMS64_17630 545dc08c34fe12046804507321350a44 668 SMART SM00278 445 464 40.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMS64_17630 545dc08c34fe12046804507321350a44 668 SMART SM00278 511 530 150.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMS64_17630 545dc08c34fe12046804507321350a44 668 SMART SM00278 543 562 870.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMS64_17630 545dc08c34fe12046804507321350a44 668 SMART SM00278 479 498 13.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMS64_17630 545dc08c34fe12046804507321350a44 668 Gene3D G3DSA:3.40.50.10190 585 667 9.6E-28 T 11-10-2018 IPR036420 BRCT domain superfamily AMS64_17630 545dc08c34fe12046804507321350a44 668 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 662 6.6E-258 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMS64_17630 545dc08c34fe12046804507321350a44 668 SMART SM00532 3 447 1.9E-268 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AMS64_17630 545dc08c34fe12046804507321350a44 668 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 321 397 4.8E-36 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AMS64_17630 545dc08c34fe12046804507321350a44 668 Gene3D G3DSA:1.10.150.20 431 504 8.6E-30 T 11-10-2018 AMS64_17630 545dc08c34fe12046804507321350a44 668 Gene3D G3DSA:3.30.470.90 69 316 2.5E-96 T 11-10-2018 AMS64_17630 545dc08c34fe12046804507321350a44 668 Gene3D G3DSA:2.40.50.140 317 389 3.1E-34 T 11-10-2018 AMS64_17630 545dc08c34fe12046804507321350a44 668 Gene3D G3DSA:1.10.287.610 1 68 1.1E-24 T 11-10-2018 AMS64_17630 545dc08c34fe12046804507321350a44 668 Pfam PF14520 Helix-hairpin-helix domain 446 498 1.2E-4 T 11-10-2018 AMS64_17630 545dc08c34fe12046804507321350a44 668 SMART SM00292 592 668 2.3E-12 T 11-10-2018 IPR001357 BRCT domain AMS64_17630 545dc08c34fe12046804507321350a44 668 Gene3D G3DSA:2.20.70.80 390 430 2.6E-18 T 11-10-2018 AMS64_17630 545dc08c34fe12046804507321350a44 668 SUPERFAMILY SSF52113 591 666 6.87E-20 T 11-10-2018 IPR036420 BRCT domain superfamily AMS64_17630 545dc08c34fe12046804507321350a44 668 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 406 433 1.0E-10 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AMS64_17630 545dc08c34fe12046804507321350a44 668 Pfam PF12826 Helix-hairpin-helix motif 509 571 1.3E-21 T 11-10-2018 AMS64_17630 545dc08c34fe12046804507321350a44 668 SUPERFAMILY SSF47781 403 582 2.56E-60 T 11-10-2018 IPR010994 RuvA domain 2-like AMS64_17630 545dc08c34fe12046804507321350a44 668 Gene3D G3DSA:1.10.150.20 505 584 3.7E-29 T 11-10-2018 AMS64_17630 545dc08c34fe12046804507321350a44 668 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site AMS64_17630 545dc08c34fe12046804507321350a44 668 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 330 345 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site AMS64_17630 545dc08c34fe12046804507321350a44 668 Hamap MF_01588 DNA ligase [ligA]. 2 666 52.496 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMS64_13695 7f3df746b57134a8e1ff79056bb67c15 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.1E-61 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMS64_13695 7f3df746b57134a8e1ff79056bb67c15 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 6.9E-68 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMS64_13695 7f3df746b57134a8e1ff79056bb67c15 173 SUPERFAMILY SSF53098 3 156 5.69E-53 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_13695 7f3df746b57134a8e1ff79056bb67c15 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 5.1E-39 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMS64_13695 7f3df746b57134a8e1ff79056bb67c15 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 5.1E-39 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMS64_13695 7f3df746b57134a8e1ff79056bb67c15 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 5.1E-39 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMS64_13695 7f3df746b57134a8e1ff79056bb67c15 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 5.1E-39 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMS64_13695 7f3df746b57134a8e1ff79056bb67c15 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 5.1E-39 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMS64_13695 7f3df746b57134a8e1ff79056bb67c15 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AMS64_13695 7f3df746b57134a8e1ff79056bb67c15 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.048 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMS64_13695 7f3df746b57134a8e1ff79056bb67c15 173 Gene3D G3DSA:3.30.420.10 2 159 1.1E-50 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_04405 8819e7601465c97d01f33ffc9b65b449 119 Pfam PF17209 Hfq protein 21 80 4.9E-27 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMS64_04405 8819e7601465c97d01f33ffc9b65b449 119 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 13 79 26.125 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMS64_04405 8819e7601465c97d01f33ffc9b65b449 119 SUPERFAMILY SSF50182 19 81 1.11E-17 T 11-10-2018 IPR010920 LSM domain superfamily AMS64_04405 8819e7601465c97d01f33ffc9b65b449 119 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 20 78 1.0E-21 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMS64_04405 8819e7601465c97d01f33ffc9b65b449 119 Gene3D G3DSA:2.30.30.100 16 89 2.3E-23 T 11-10-2018 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 Pfam PF00122 E1-E2 ATPase 108 285 1.2E-30 T 11-10-2018 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 13 674 6.7E-284 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 SUPERFAMILY SSF81653 114 208 1.44E-20 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 Gene3D G3DSA:1.20.1110.10 208 318 2.0E-5 T 11-10-2018 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 11 677 38.122 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 514 533 3.5E-22 T 11-10-2018 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 155 169 3.5E-22 T 11-10-2018 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 537 549 3.5E-22 T 11-10-2018 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 306 320 3.5E-22 T 11-10-2018 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 461 471 3.5E-22 T 11-10-2018 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 308 314 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 Gene3D G3DSA:3.40.50.1000 446 561 2.8E-21 T 11-10-2018 IPR023214 HAD superfamily AMS64_00345 d705733356f49ded45156320dbf61e8f 679 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 74 325 2.5E-29 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 371 602 3.9E-43 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 SUPERFAMILY SSF81665 34 300 2.88E-9 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 Gene3D G3DSA:2.70.150.20 99 207 6.8E-24 T 11-10-2018 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 Pfam PF00702 haloacid dehalogenase-like hydrolase 302 528 5.6E-32 T 11-10-2018 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 SUPERFAMILY SSF56784 294 558 9.74E-37 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_00345 d705733356f49ded45156320dbf61e8f 679 Gene3D G3DSA:3.40.1110.10 319 445 1.1E-39 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMS64_00345 d705733356f49ded45156320dbf61e8f 679 ProSitePatterns PS01229 Hypothetical cof family signature 2. 514 536 - T 11-10-2018 AMS64_20250 5f356f3be50c09f583700fa8720420c9 224 Gene3D G3DSA:3.40.600.10 1 222 1.6E-53 T 11-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 AMS64_20250 5f356f3be50c09f583700fa8720420c9 224 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 3.1E-33 T 11-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AMS64_20250 5f356f3be50c09f583700fa8720420c9 224 SMART SM00927 53 151 9.4E-64 T 11-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AMS64_20250 5f356f3be50c09f583700fa8720420c9 224 SUPERFAMILY SSF52980 1 220 1.5E-79 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMS64_20250 5f356f3be50c09f583700fa8720420c9 224 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 224 148.595 T 11-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AMS64_20250 5f356f3be50c09f583700fa8720420c9 224 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 1.3E-103 T 11-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AMS64_09360 eadb60500dffa33d8206642692a6dd54 257 SUPERFAMILY SSF52467 6 234 1.31E-73 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMS64_09360 eadb60500dffa33d8206642692a6dd54 257 Pfam PF02146 Sir2 family 13 186 1.9E-50 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 AMS64_09360 eadb60500dffa33d8206642692a6dd54 257 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 58.025 T 11-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AMS64_09360 eadb60500dffa33d8206642692a6dd54 257 Gene3D G3DSA:3.40.50.1220 8 227 2.7E-79 T 11-10-2018 AMS64_09360 eadb60500dffa33d8206642692a6dd54 257 Gene3D G3DSA:3.30.1600.10 22 158 2.7E-79 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily AMS64_17960 53c4c9d97820aa36c8598c4924d83e23 316 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 148 8.2E-66 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_17960 53c4c9d97820aa36c8598c4924d83e23 316 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 316 50.914 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_17960 53c4c9d97820aa36c8598c4924d83e23 316 SUPERFAMILY SSF52096 4 315 5.55E-106 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_17960 53c4c9d97820aa36c8598c4924d83e23 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 2.8E-50 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_17960 53c4c9d97820aa36c8598c4924d83e23 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 2.8E-50 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_17960 53c4c9d97820aa36c8598c4924d83e23 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 2.8E-50 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_17960 53c4c9d97820aa36c8598c4924d83e23 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 2.8E-50 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_17960 53c4c9d97820aa36c8598c4924d83e23 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 2.8E-50 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_17960 53c4c9d97820aa36c8598c4924d83e23 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 2.8E-50 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_17960 53c4c9d97820aa36c8598c4924d83e23 316 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 3 316 1.2E-166 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_17960 53c4c9d97820aa36c8598c4924d83e23 316 Gene3D G3DSA:3.90.226.10 1 315 9.1E-122 T 11-10-2018 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 Gene3D G3DSA:1.20.1640.10 501 1003 1.7E-243 T 11-10-2018 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 SUPERFAMILY SSF82866 288 490 1.09E-36 T 11-10-2018 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 SUPERFAMILY SSF82714 183 262 2.22E-7 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 Pfam PF00873 AcrB/AcrD/AcrF family 4 1005 8.1E-186 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 Gene3D G3DSA:3.30.2090.10 698 784 1.7E-243 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.1E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.1E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.1E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.1E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.1E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.1E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 3.1E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 Gene3D G3DSA:3.30.70.1440 647 846 1.7E-243 T 11-10-2018 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 SUPERFAMILY SSF82693 40 133 1.31E-20 T 11-10-2018 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 SUPERFAMILY SSF82714 697 781 6.02E-6 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 Gene3D G3DSA:3.30.2090.10 181 269 1.7E-243 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 Gene3D G3DSA:3.30.70.1320 133 324 1.7E-243 T 11-10-2018 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 Gene3D G3DSA:3.30.70.1430 553 646 1.7E-243 T 11-10-2018 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 SUPERFAMILY SSF82866 780 1006 1.27E-41 T 11-10-2018 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 Gene3D G3DSA:3.30.70.1430 40 792 1.7E-243 T 11-10-2018 AMS64_13685 db06380a5e5fbad5dc32fa76a2469c59 1020 Gene3D G3DSA:1.20.1640.10 10 500 1.7E-243 T 11-10-2018 AMS64_12610 8722094234e1104ca190f550b942f5c9 250 PIRSF PIRSF006102 18 236 6.2E-78 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMS64_12610 8722094234e1104ca190f550b942f5c9 250 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 18 227 27.812 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 AMS64_12610 8722094234e1104ca190f550b942f5c9 250 Pfam PF02508 Rnf-Nqr subunit, membrane protein 23 217 1.2E-65 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMS64_12610 8722094234e1104ca190f550b942f5c9 250 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 23 224 3.5E-84 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 AMS64_20075 6845907283589f9b7dd5853c7baf3126 336 SUPERFAMILY SSF56784 110 320 1.9E-45 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_20075 6845907283589f9b7dd5853c7baf3126 336 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 120 288 2.9E-24 T 11-10-2018 AMS64_20075 6845907283589f9b7dd5853c7baf3126 336 Gene3D G3DSA:3.40.50.1000 85 325 1.7E-72 T 11-10-2018 IPR023214 HAD superfamily AMS64_20075 6845907283589f9b7dd5853c7baf3126 336 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 108 323 1.5E-78 T 11-10-2018 AMS64_20075 6845907283589f9b7dd5853c7baf3126 336 Pfam PF12710 haloacid dehalogenase-like hydrolase 123 288 4.3E-19 T 11-10-2018 AMS64_15875 9bbf3c4f2bc356cbacd9c7e7cb2b4de2 810 PIRSF PIRSF000379 52 810 3.7E-171 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AMS64_15875 9bbf3c4f2bc356cbacd9c7e7cb2b4de2 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 9 810 0.0 T 11-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AMS64_15875 9bbf3c4f2bc356cbacd9c7e7cb2b4de2 810 Gene3D G3DSA:3.20.70.20 10 810 2.3E-271 T 11-10-2018 AMS64_15875 9bbf3c4f2bc356cbacd9c7e7cb2b4de2 810 Pfam PF01228 Glycine radical 688 791 4.3E-29 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 AMS64_15875 9bbf3c4f2bc356cbacd9c7e7cb2b4de2 810 SUPERFAMILY SSF51998 3 809 1.59E-226 T 11-10-2018 AMS64_15875 9bbf3c4f2bc356cbacd9c7e7cb2b4de2 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AMS64_15875 9bbf3c4f2bc356cbacd9c7e7cb2b4de2 810 Pfam PF02901 Pyruvate formate lyase-like 11 671 3.2E-210 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AMS64_17940 99ab983d67897971eb66a97073d081bf 671 Pfam PF11992 Domain of unknown function (DUF3488) 13 333 5.8E-70 T 11-10-2018 IPR021878 Protein of unknown function DUF3488 AMS64_17940 99ab983d67897971eb66a97073d081bf 671 SUPERFAMILY SSF54001 284 605 2.94E-55 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMS64_17940 99ab983d67897971eb66a97073d081bf 671 Gene3D G3DSA:3.10.620.30 300 526 1.2E-19 T 11-10-2018 AMS64_17940 99ab983d67897971eb66a97073d081bf 671 Pfam PF01841 Transglutaminase-like superfamily 378 476 2.6E-20 T 11-10-2018 IPR002931 Transglutaminase-like AMS64_17940 99ab983d67897971eb66a97073d081bf 671 SMART SM00460 407 478 3.8E-20 T 11-10-2018 IPR002931 Transglutaminase-like AMS64_14095 464eb547df0596df1bc7c655bd4fb009 252 PIRSF PIRSF005902 1 244 1.2E-31 T 11-10-2018 IPR001130 TatD family GO:0016788 AMS64_14095 464eb547df0596df1bc7c655bd4fb009 252 Gene3D G3DSA:3.20.20.140 1 246 3.3E-56 T 11-10-2018 AMS64_14095 464eb547df0596df1bc7c655bd4fb009 252 SUPERFAMILY SSF51556 2 239 7.74E-41 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_14095 464eb547df0596df1bc7c655bd4fb009 252 Pfam PF01026 TatD related DNase 2 240 1.2E-34 T 11-10-2018 IPR001130 TatD family GO:0016788 AMS64_07695 a6b2be3836847c404391d1dba706b273 308 SUPERFAMILY SSF101801 151 212 2.75E-5 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_07695 a6b2be3836847c404391d1dba706b273 308 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 41 302 7.1E-57 T 11-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 AMS64_07695 a6b2be3836847c404391d1dba706b273 308 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 175 185 2.0E-10 T 11-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AMS64_07695 a6b2be3836847c404391d1dba706b273 308 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 235 247 2.0E-10 T 11-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AMS64_07695 a6b2be3836847c404391d1dba706b273 308 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 279 296 2.0E-10 T 11-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AMS64_07695 a6b2be3836847c404391d1dba706b273 308 Gene3D G3DSA:2.30.330.10 219 308 2.2E-26 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_07695 a6b2be3836847c404391d1dba706b273 308 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 233 301 4.4E-14 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AMS64_07695 a6b2be3836847c404391d1dba706b273 308 SUPERFAMILY SSF101801 232 306 9.81E-17 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 SUPERFAMILY SSF52172 16 149 1.35E-20 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 SUPERFAMILY SSF48452 178 302 5.22E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 Gene3D G3DSA:1.25.40.10 446 509 3.2E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 Gene3D G3DSA:3.40.50.2300 6 146 2.7E-19 T 11-10-2018 AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 Pfam PF14559 Tetratricopeptide repeat 251 307 4.0E-7 T 11-10-2018 AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 Pfam PF00072 Response regulator receiver domain 19 129 2.6E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 Gene3D G3DSA:1.25.40.10 149 356 2.2E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 Pfam PF13432 Tetratricopeptide repeat 179 232 0.0026 T 11-10-2018 AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 Pfam PF13432 Tetratricopeptide repeat 461 503 0.012 T 11-10-2018 AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 SMART SM00028 207 240 76.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 SMART SM00028 275 308 76.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 SMART SM00028 456 489 0.022 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 SMART SM00028 241 274 34.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_13000 2ee2abfa7eca52f1a8df231c1f40834c 548 SMART SM00448 17 133 3.0E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_10705 f9c7e204fb381f65d1ddaf5ec2eebec7 136 Pfam PF13411 MerR HTH family regulatory protein 12 77 8.5E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_10705 f9c7e204fb381f65d1ddaf5ec2eebec7 136 SUPERFAMILY SSF46955 12 124 1.36E-27 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMS64_10705 f9c7e204fb381f65d1ddaf5ec2eebec7 136 Gene3D G3DSA:1.10.1660.10 4 131 4.5E-29 T 11-10-2018 AMS64_10705 f9c7e204fb381f65d1ddaf5ec2eebec7 136 SMART SM00422 12 79 1.2E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_03330 773f83fc96005aa3869dd827c2e2aa45 291 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 30 288 3.6E-94 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AMS64_03330 773f83fc96005aa3869dd827c2e2aa45 291 Gene3D G3DSA:3.20.20.70 132 278 3.8E-120 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_03330 773f83fc96005aa3869dd827c2e2aa45 291 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 31 121 5.2E-24 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AMS64_03330 773f83fc96005aa3869dd827c2e2aa45 291 SUPERFAMILY SSF51690 123 288 3.85E-61 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AMS64_03330 773f83fc96005aa3869dd827c2e2aa45 291 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 123 287 5.2E-61 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 AMS64_03330 773f83fc96005aa3869dd827c2e2aa45 291 PIRSF PIRSF006250 1 291 1.2E-103 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AMS64_03330 773f83fc96005aa3869dd827c2e2aa45 291 SUPERFAMILY SSF54675 2 122 1.41E-28 T 11-10-2018 AMS64_03330 773f83fc96005aa3869dd827c2e2aa45 291 Gene3D G3DSA:3.90.1170.20 4 287 3.8E-120 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 Gene3D G3DSA:3.30.930.10 11 467 5.1E-244 T 11-10-2018 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 SUPERFAMILY SSF55681 10 480 9.03E-107 T 11-10-2018 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 1.5E-249 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 6.9E-27 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 SUPERFAMILY SSF52954 465 572 2.42E-34 T 11-10-2018 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 573 42.426 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 Pfam PF03129 Anticodon binding domain 477 570 2.2E-22 T 11-10-2018 IPR004154 Anticodon-binding AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.9E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.9E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.9E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.9E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 PIRSF PIRSF001535 1 574 6.3E-274 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 Gene3D G3DSA:3.40.50.800 4 557 5.1E-244 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 Gene3D G3DSA:3.90.960.10 240 391 5.1E-244 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 461 2.7E-48 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_04380 f5b1b988cc0ed70c426abc461fe3bd65 574 SUPERFAMILY SSF55826 218 392 4.58E-33 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMS64_18755 5dd01342a9fcf905043f5d1857a0334b 89 SMART SM01387 8 88 3.5E-51 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_18755 5dd01342a9fcf905043f5d1857a0334b 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-31 T 11-10-2018 AMS64_18755 5dd01342a9fcf905043f5d1857a0334b 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.7E-37 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_18755 5dd01342a9fcf905043f5d1857a0334b 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.395 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_18755 5dd01342a9fcf905043f5d1857a0334b 89 Pfam PF00312 Ribosomal protein S15 8 88 1.5E-36 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_18755 5dd01342a9fcf905043f5d1857a0334b 89 SUPERFAMILY SSF47060 3 89 1.94E-34 T 11-10-2018 IPR009068 S15/NS1, RNA-binding AMS64_18755 5dd01342a9fcf905043f5d1857a0334b 89 Gene3D G3DSA:1.10.287.10 2 89 2.6E-35 T 11-10-2018 AMS64_17620 5679b261a87136a5f6906cfb9dd2afc8 705 SUPERFAMILY SSF51998 121 686 4.27E-195 T 11-10-2018 AMS64_17620 5679b261a87136a5f6906cfb9dd2afc8 705 Gene3D G3DSA:3.20.70.20 121 686 2.2E-230 T 11-10-2018 AMS64_17620 5679b261a87136a5f6906cfb9dd2afc8 705 ProSitePatterns PS00850 Glycine radical domain signature. 675 683 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AMS64_17620 5679b261a87136a5f6906cfb9dd2afc8 705 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 704 1.5E-200 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AMS64_17620 5679b261a87136a5f6906cfb9dd2afc8 705 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 704 4.9E-180 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AMS64_17620 5679b261a87136a5f6906cfb9dd2afc8 705 Pfam PF03477 ATP cone domain 4 89 7.7E-21 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AMS64_17765 c8591c97fb1a25d280c062028cf4e7e0 444 Pfam PF13520 Amino acid permease 9 422 6.0E-33 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_17765 c8591c97fb1a25d280c062028cf4e7e0 444 Gene3D G3DSA:1.20.1740.10 4 438 2.6E-56 T 11-10-2018 AMS64_17765 c8591c97fb1a25d280c062028cf4e7e0 444 PIRSF PIRSF006060 1 441 4.1E-44 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_03885 9cf7e5100359e900b337c1afdf417f5a 585 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 22 582 34.52 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AMS64_03885 9cf7e5100359e900b337c1afdf417f5a 585 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 430 564 2.8E-6 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMS64_03885 9cf7e5100359e900b337c1afdf417f5a 585 PIRSF PIRSF004983 19 584 2.7E-169 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AMS64_03885 9cf7e5100359e900b337c1afdf417f5a 585 Gene3D G3DSA:3.40.50.970 20 209 8.0E-60 T 11-10-2018 AMS64_03885 9cf7e5100359e900b337c1afdf417f5a 585 SUPERFAMILY SSF52518 21 200 1.56E-34 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_03885 9cf7e5100359e900b337c1afdf417f5a 585 Pfam PF16582 Middle domain of thiamine pyrophosphate 205 411 8.8E-59 T 11-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AMS64_03885 9cf7e5100359e900b337c1afdf417f5a 585 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 29 160 4.0E-30 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMS64_03885 9cf7e5100359e900b337c1afdf417f5a 585 Gene3D G3DSA:3.40.50.970 393 584 5.6E-53 T 11-10-2018 AMS64_03885 9cf7e5100359e900b337c1afdf417f5a 585 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 28 454 1.7E-138 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AMS64_03885 9cf7e5100359e900b337c1afdf417f5a 585 SUPERFAMILY SSF52518 388 580 1.15E-22 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_03885 9cf7e5100359e900b337c1afdf417f5a 585 SUPERFAMILY SSF52467 242 362 2.07E-8 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMS64_03885 9cf7e5100359e900b337c1afdf417f5a 585 Gene3D G3DSA:3.40.50.1220 234 363 1.9E-39 T 11-10-2018 AMS64_03150 22ad461c0c6ab255d6b939a48fdfca6a 284 SUPERFAMILY SSF64518 1 284 7.98E-74 T 11-10-2018 AMS64_03150 22ad461c0c6ab255d6b939a48fdfca6a 284 Gene3D G3DSA:1.20.1330.10 45 177 9.4E-60 T 11-10-2018 AMS64_03150 22ad461c0c6ab255d6b939a48fdfca6a 284 PRINTS PR00207 Flagellin signature 37 54 8.3E-20 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMS64_03150 22ad461c0c6ab255d6b939a48fdfca6a 284 PRINTS PR00207 Flagellin signature 76 95 8.3E-20 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMS64_03150 22ad461c0c6ab255d6b939a48fdfca6a 284 PRINTS PR00207 Flagellin signature 111 134 8.3E-20 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMS64_03150 22ad461c0c6ab255d6b939a48fdfca6a 284 Pfam PF00700 Bacterial flagellin C-terminal helical region 201 282 2.3E-22 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMS64_03150 22ad461c0c6ab255d6b939a48fdfca6a 284 Gene3D G3DSA:1.10.8.410 231 284 3.1E-13 T 11-10-2018 AMS64_03150 22ad461c0c6ab255d6b939a48fdfca6a 284 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 4.2E-40 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMS64_03150 22ad461c0c6ab255d6b939a48fdfca6a 284 Gene3D G3DSA:1.20.58.1830 5 33 9.4E-60 T 11-10-2018 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 SUPERFAMILY SSF54292 1 77 1.62E-18 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 SUPERFAMILY SSF50692 826 900 3.16E-8 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 126 6.0E-15 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 SMART SM00926 221 275 1.9E-10 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 SUPERFAMILY SSF53706 219 690 1.69E-82 T 11-10-2018 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 SMART SM00929 88 128 1.2E-19 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 Gene3D G3DSA:2.20.25.90 221 274 1.4E-13 T 11-10-2018 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 SUPERFAMILY SSF54862 81 213 2.76E-34 T 11-10-2018 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 Gene3D G3DSA:3.40.50.740 506 694 2.7E-16 T 11-10-2018 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 603 620 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 76 6.0E-12 T 11-10-2018 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 Gene3D G3DSA:3.10.20.740 1 128 7.3E-29 T 11-10-2018 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 660 2.0E-201 T 11-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 6.1E-11 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14520 b3cfb2ad0b1eda46aaae5c7617066aff 918 Pfam PF00384 Molybdopterin oxidoreductase 473 643 5.4E-13 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_20290 d3c702556c482970f85f1dc3053c928e 426 SUPERFAMILY SSF54631 189 326 5.05E-26 T 11-10-2018 AMS64_20290 d3c702556c482970f85f1dc3053c928e 426 Gene3D G3DSA:3.30.465.10 337 415 1.0E-25 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMS64_20290 d3c702556c482970f85f1dc3053c928e 426 Gene3D G3DSA:3.10.580.10 184 335 2.5E-42 T 11-10-2018 AMS64_20290 d3c702556c482970f85f1dc3053c928e 426 Pfam PF00571 CBS domain 275 323 2.1E-4 T 11-10-2018 IPR000644 CBS domain AMS64_20290 d3c702556c482970f85f1dc3053c928e 426 SUPERFAMILY SSF56176 337 423 3.54E-21 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMS64_20290 d3c702556c482970f85f1dc3053c928e 426 SMART SM01091 339 417 1.7E-23 T 11-10-2018 IPR005170 Transporter-associated domain AMS64_20290 d3c702556c482970f85f1dc3053c928e 426 Pfam PF01595 Domain of unknown function DUF21 11 179 5.9E-50 T 11-10-2018 IPR002550 CNNM, transmembrane domain AMS64_20290 d3c702556c482970f85f1dc3053c928e 426 Pfam PF03471 Transporter associated domain 341 414 4.9E-15 T 11-10-2018 IPR005170 Transporter-associated domain AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 SUPERFAMILY SSF55874 474 635 4.45E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 SUPERFAMILY SSF52172 33 142 1.15E-7 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 Gene3D G3DSA:3.40.50.2300 10 138 6.6E-7 T 11-10-2018 AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 Pfam PF00512 His Kinase A (phospho-acceptor) domain 338 366 2.8E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 SMART SM00100 174 299 1.1E-4 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 Gene3D G3DSA:3.30.565.10 490 639 7.4E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 Pfam PF00027 Cyclic nucleotide-binding domain 200 286 4.5E-14 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 SMART SM00387 527 637 1.0E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 SUPERFAMILY SSF47384 333 368 4.32E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 Gene3D G3DSA:2.60.120.10 173 315 1.1E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 SUPERFAMILY SSF51206 199 306 2.88E-18 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 593 4.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 634 4.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 615 4.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 579 4.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_21845 56bf26a953d0766be552c67b260ce15f 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 529 636 9.5E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_09560 f42a840a0a17499215e8c4919081f561 76 SUPERFAMILY SSF52833 1 73 1.69E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_09560 f42a840a0a17499215e8c4919081f561 76 Gene3D G3DSA:3.40.30.10 1 75 8.4E-21 T 11-10-2018 AMS64_09560 f42a840a0a17499215e8c4919081f561 76 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 71 2.8E-13 T 11-10-2018 IPR008554 Glutaredoxin-like AMS64_08125 598e6e76b254329079bebb0d9c1aa065 282 Pfam PF01226 Formate/nitrite transporter 19 276 6.4E-76 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AMS64_08125 598e6e76b254329079bebb0d9c1aa065 282 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site AMS64_08125 598e6e76b254329079bebb0d9c1aa065 282 Gene3D G3DSA:1.20.1080.10 1 268 3.2E-99 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMS64_08125 598e6e76b254329079bebb0d9c1aa065 282 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site AMS64_08125 598e6e76b254329079bebb0d9c1aa065 282 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 278 2.8E-86 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AMS64_08125 598e6e76b254329079bebb0d9c1aa065 282 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 15 279 9.0E-127 T 11-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AMS64_18010 bbd862feae0471bae497b5e720bfdd3b 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 240 1.5E-36 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMS64_18010 bbd862feae0471bae497b5e720bfdd3b 398 Gene3D G3DSA:1.10.1740.10 313 398 2.4E-28 T 11-10-2018 AMS64_18010 bbd862feae0471bae497b5e720bfdd3b 398 SUPERFAMILY SSF69055 303 396 1.01E-29 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMS64_18010 bbd862feae0471bae497b5e720bfdd3b 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 272 388 1.9E-39 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMS64_18010 bbd862feae0471bae497b5e720bfdd3b 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 390 5.0E-160 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMS64_18010 bbd862feae0471bae497b5e720bfdd3b 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 393 45.885 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMS64_18010 bbd862feae0471bae497b5e720bfdd3b 398 PIRSF PIRSF006205 2 398 1.3E-148 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMS64_18010 bbd862feae0471bae497b5e720bfdd3b 398 SUPERFAMILY SSF55347 127 275 1.7E-62 T 11-10-2018 AMS64_18010 bbd862feae0471bae497b5e720bfdd3b 398 Gene3D G3DSA:3.40.50.720 1 151 1.0E-50 T 11-10-2018 AMS64_18010 bbd862feae0471bae497b5e720bfdd3b 398 SUPERFAMILY SSF51735 3 151 3.82E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_18010 bbd862feae0471bae497b5e720bfdd3b 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 133 8.1E-44 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMS64_03235 f5186bbee1d375effbf93c89202fd3ca 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.9E-5 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03235 f5186bbee1d375effbf93c89202fd3ca 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.136 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03235 f5186bbee1d375effbf93c89202fd3ca 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03235 f5186bbee1d375effbf93c89202fd3ca 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03235 f5186bbee1d375effbf93c89202fd3ca 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 2.3E-151 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03235 f5186bbee1d375effbf93c89202fd3ca 360 Pfam PF00953 Glycosyl transferase family 4 99 283 3.1E-35 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AMS64_04905 98112ccf9a8169909162f5e473f303df 456 Pfam PF08245 Mur ligase middle domain 108 292 2.5E-20 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMS64_04905 98112ccf9a8169909162f5e473f303df 456 SUPERFAMILY SSF53244 312 448 8.24E-40 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMS64_04905 98112ccf9a8169909162f5e473f303df 456 SUPERFAMILY SSF53623 94 310 2.35E-49 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMS64_04905 98112ccf9a8169909162f5e473f303df 456 Gene3D G3DSA:3.40.50.720 1 90 1.0E-37 T 11-10-2018 AMS64_04905 98112ccf9a8169909162f5e473f303df 456 SUPERFAMILY SSF51984 1 90 5.76E-25 T 11-10-2018 AMS64_04905 98112ccf9a8169909162f5e473f303df 456 Gene3D G3DSA:3.40.1190.10 93 311 2.4E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMS64_04905 98112ccf9a8169909162f5e473f303df 456 Pfam PF01225 Mur ligase family, catalytic domain 2 99 3.0E-19 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMS64_04905 98112ccf9a8169909162f5e473f303df 456 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 450 9.1E-234 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AMS64_04905 98112ccf9a8169909162f5e473f303df 456 Gene3D G3DSA:3.90.190.20 315 451 1.2E-31 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMS64_04905 98112ccf9a8169909162f5e473f303df 456 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.992 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AMS64_04905 98112ccf9a8169909162f5e473f303df 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 360 2.3E-8 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMS64_11750 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 292 1.4E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMS64_11750 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF01548 Transposase 10 149 2.7E-18 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMS64_18460 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 292 1.4E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMS64_18460 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF01548 Transposase 10 149 2.7E-18 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMS64_22560 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 292 1.4E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMS64_22560 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF01548 Transposase 10 149 2.7E-18 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMS64_04255 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 292 1.4E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMS64_04255 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF01548 Transposase 10 149 2.7E-18 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMS64_10815 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 292 1.4E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMS64_10815 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF01548 Transposase 10 149 2.7E-18 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMS64_07920 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 292 1.4E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMS64_07920 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF01548 Transposase 10 149 2.7E-18 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMS64_13895 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 292 1.4E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMS64_13895 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF01548 Transposase 10 149 2.7E-18 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMS64_14210 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 292 1.4E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMS64_14210 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF01548 Transposase 10 149 2.7E-18 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMS64_08665 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 292 1.4E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMS64_08665 ba25f25f1fc16f1273bf646c2fe959ad 347 Pfam PF01548 Transposase 10 149 2.7E-18 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 Gene3D G3DSA:3.30.450.20 881 1000 4.2E-7 T 11-10-2018 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 Gene3D G3DSA:3.30.450.20 230 372 1.5E-7 T 11-10-2018 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 SMART SM00448 736 849 1.0E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 SMART SM00304 391 444 3.5E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 SMART SM00304 983 1040 86.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 Gene3D G3DSA:1.10.287.130 444 538 6.0E-20 T 11-10-2018 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 SUPERFAMILY SSF52172 731 863 4.27E-39 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 SUPERFAMILY SSF55785 873 958 8.68E-9 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 SUPERFAMILY SSF47384 464 541 1.39E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 Gene3D G3DSA:3.30.565.10 539 698 7.7E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 Gene3D G3DSA:3.40.50.2300 736 880 1.5E-36 T 11-10-2018 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 636 2.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 692 2.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 650 2.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 673 2.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 587 694 9.7E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 SMART SM00387 586 695 4.3E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 SMART SM00091 887 953 8.1E-7 T 11-10-2018 IPR000014 PAS domain AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 SUPERFAMILY SSF158472 392 442 2.35E-9 T 11-10-2018 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 886 947 2.2E-6 T 11-10-2018 IPR000014 PAS domain AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 Pfam PF08448 PAS fold 898 989 1.3E-6 T 11-10-2018 IPR013656 PAS fold-4 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 SUPERFAMILY SSF55874 529 695 1.57E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 Pfam PF00512 His Kinase A (phospho-acceptor) domain 474 538 4.0E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 Pfam PF00072 Response regulator receiver domain 738 849 1.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 Gene3D G3DSA:1.10.8.500 390 443 2.6E-11 T 11-10-2018 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 Pfam PF02743 Cache domain 154 353 1.0E-12 T 11-10-2018 IPR033479 Double Cache domain 1 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 Pfam PF00672 HAMP domain 391 439 5.0E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_07035 ede3cee196ca7a1adffbec1718dc83ec 1145 SMART SM00388 473 540 5.1E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_17245 1f25e79cf223ff19967f4eb607ff4a17 119 SUPERFAMILY SSF54523 36 117 3.92E-26 T 11-10-2018 AMS64_17245 1f25e79cf223ff19967f4eb607ff4a17 119 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 26 6.2E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_17245 1f25e79cf223ff19967f4eb607ff4a17 119 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_17245 1f25e79cf223ff19967f4eb607ff4a17 119 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.6E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_17245 1f25e79cf223ff19967f4eb607ff4a17 119 Pfam PF02501 Type II secretion system (T2SS), protein I 39 117 3.1E-26 T 11-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AMS64_17245 1f25e79cf223ff19967f4eb607ff4a17 119 TIGRFAM TIGR01707 gspI: type II secretion system protein I 5 104 5.7E-30 T 11-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AMS64_17245 1f25e79cf223ff19967f4eb607ff4a17 119 Gene3D G3DSA:3.30.1300.30 31 119 2.4E-32 T 11-10-2018 AMS64_06175 a986e9f77b77b9d4b3572b773b2b340b 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 25.277 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 AMS64_06175 a986e9f77b77b9d4b3572b773b2b340b 87 Gene3D G3DSA:3.30.70.260 1 87 5.4E-32 T 11-10-2018 AMS64_06175 a986e9f77b77b9d4b3572b773b2b340b 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 4.2E-28 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 AMS64_06175 a986e9f77b77b9d4b3572b773b2b340b 87 SUPERFAMILY SSF117991 1 87 1.31E-30 T 11-10-2018 IPR027471 YbeD-like domain superfamily AMS64_13795 844a687fa5c4672e39b5cd74be2f7359 166 PIRSF PIRSF003165 1 160 5.7E-52 T 11-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup AMS64_13795 844a687fa5c4672e39b5cd74be2f7359 166 SUPERFAMILY SSF48452 27 139 4.17E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_13795 844a687fa5c4672e39b5cd74be2f7359 166 Pfam PF07720 Tetratricopeptide repeat 36 68 0.0036 T 11-10-2018 IPR011716 Tetratricopeptide TPR-3 AMS64_13795 844a687fa5c4672e39b5cd74be2f7359 166 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 22 45 1.6E-43 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AMS64_13795 844a687fa5c4672e39b5cd74be2f7359 166 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 47 66 1.6E-43 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AMS64_13795 844a687fa5c4672e39b5cd74be2f7359 166 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 103 125 1.6E-43 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AMS64_13795 844a687fa5c4672e39b5cd74be2f7359 166 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 71 93 1.6E-43 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AMS64_13795 844a687fa5c4672e39b5cd74be2f7359 166 Gene3D G3DSA:1.25.40.10 11 161 4.2E-54 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_13795 844a687fa5c4672e39b5cd74be2f7359 166 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 20 154 2.0E-39 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AMS64_07760 844a687fa5c4672e39b5cd74be2f7359 166 PIRSF PIRSF003165 1 160 5.7E-52 T 11-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup AMS64_07760 844a687fa5c4672e39b5cd74be2f7359 166 SUPERFAMILY SSF48452 27 139 4.17E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_07760 844a687fa5c4672e39b5cd74be2f7359 166 Pfam PF07720 Tetratricopeptide repeat 36 68 0.0036 T 11-10-2018 IPR011716 Tetratricopeptide TPR-3 AMS64_07760 844a687fa5c4672e39b5cd74be2f7359 166 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 22 45 1.6E-43 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AMS64_07760 844a687fa5c4672e39b5cd74be2f7359 166 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 47 66 1.6E-43 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AMS64_07760 844a687fa5c4672e39b5cd74be2f7359 166 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 103 125 1.6E-43 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AMS64_07760 844a687fa5c4672e39b5cd74be2f7359 166 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 71 93 1.6E-43 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AMS64_07760 844a687fa5c4672e39b5cd74be2f7359 166 Gene3D G3DSA:1.25.40.10 11 161 4.2E-54 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_07760 844a687fa5c4672e39b5cd74be2f7359 166 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 20 154 2.0E-39 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AMS64_06850 2a0d09499a380cda2485fb3f57498dbb 126 Gene3D G3DSA:3.20.70.20 8 126 2.2E-24 T 11-10-2018 AMS64_06850 2a0d09499a380cda2485fb3f57498dbb 126 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 126 8.6E-69 T 11-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AMS64_06850 2a0d09499a380cda2485fb3f57498dbb 126 ProSitePatterns PS00850 Glycine radical domain signature. 96 104 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AMS64_06850 2a0d09499a380cda2485fb3f57498dbb 126 SUPERFAMILY SSF51998 66 125 1.97E-22 T 11-10-2018 AMS64_06850 2a0d09499a380cda2485fb3f57498dbb 126 Pfam PF01228 Glycine radical 10 107 8.0E-23 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 AMS64_06850 2a0d09499a380cda2485fb3f57498dbb 126 PIRSF PIRSF000378 2 126 1.1E-51 T 11-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AMS64_21625 e8e779cd5896fe211a81548f32948dc3 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.1E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_21625 e8e779cd5896fe211a81548f32948dc3 300 Pfam PF03466 LysR substrate binding domain 87 290 4.3E-46 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_21625 e8e779cd5896fe211a81548f32948dc3 300 SUPERFAMILY SSF46785 1 86 1.33E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_21625 e8e779cd5896fe211a81548f32948dc3 300 SUPERFAMILY SSF53850 87 295 1.57E-47 T 11-10-2018 AMS64_21625 e8e779cd5896fe211a81548f32948dc3 300 Gene3D G3DSA:1.10.10.10 1 89 1.6E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_21625 e8e779cd5896fe211a81548f32948dc3 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.9E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_21625 e8e779cd5896fe211a81548f32948dc3 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.9E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_21625 e8e779cd5896fe211a81548f32948dc3 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.9E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_21625 e8e779cd5896fe211a81548f32948dc3 300 Gene3D G3DSA:3.40.190.290 90 290 3.5E-65 T 11-10-2018 AMS64_15745 3cc5570c4bef38c1dc922e6359d81343 496 PIRSF PIRSF001267 1 495 1.2E-188 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AMS64_15745 3cc5570c4bef38c1dc922e6359d81343 496 Gene3D G3DSA:3.30.420.150 110 288 8.2E-90 T 11-10-2018 AMS64_15745 3cc5570c4bef38c1dc922e6359d81343 496 SUPERFAMILY SSF53067 5 125 2.69E-37 T 11-10-2018 AMS64_15745 3cc5570c4bef38c1dc922e6359d81343 496 Gene3D G3DSA:1.10.3210.10 303 495 7.3E-62 T 11-10-2018 AMS64_15745 3cc5570c4bef38c1dc922e6359d81343 496 SUPERFAMILY SSF109604 306 494 5.34E-49 T 11-10-2018 AMS64_15745 3cc5570c4bef38c1dc922e6359d81343 496 SUPERFAMILY SSF53067 130 304 2.78E-44 T 11-10-2018 AMS64_15745 3cc5570c4bef38c1dc922e6359d81343 496 Pfam PF02541 Ppx/GppA phosphatase family 19 300 6.6E-83 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AMS64_15745 3cc5570c4bef38c1dc922e6359d81343 496 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 6 298 1.0E-99 T 11-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AMS64_15745 3cc5570c4bef38c1dc922e6359d81343 496 Gene3D G3DSA:3.30.420.40 7 296 8.2E-90 T 11-10-2018 AMS64_13940 de90583d4027b34b0ecf72999c60b797 678 SUPERFAMILY SSF56935 34 677 1.12E-121 T 11-10-2018 AMS64_13940 de90583d4027b34b0ecf72999c60b797 678 Gene3D G3DSA:2.170.130.10 48 172 2.8E-37 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMS64_13940 de90583d4027b34b0ecf72999c60b797 678 Pfam PF00593 TonB dependent receptor 273 676 2.1E-44 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMS64_13940 de90583d4027b34b0ecf72999c60b797 678 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 162 2.2E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMS64_13940 de90583d4027b34b0ecf72999c60b797 678 Gene3D G3DSA:2.40.170.20 173 677 3.3E-94 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMS64_13940 de90583d4027b34b0ecf72999c60b797 678 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 677 8.9E-91 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AMS64_18560 27210211d938dc4aaed0488bc5422f78 444 SUPERFAMILY SSF56349 107 412 1.85E-50 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_18560 27210211d938dc4aaed0488bc5422f78 444 Gene3D G3DSA:3.30.160.390 19 106 9.5E-19 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AMS64_18560 27210211d938dc4aaed0488bc5422f78 444 Gene3D G3DSA:1.10.443.10 216 416 4.5E-21 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_18560 27210211d938dc4aaed0488bc5422f78 444 Pfam PF13356 Arm DNA-binding domain 30 94 9.3E-14 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AMS64_18560 27210211d938dc4aaed0488bc5422f78 444 Gene3D G3DSA:1.10.150.130 107 206 6.2E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_18560 27210211d938dc4aaed0488bc5422f78 444 Pfam PF00589 Phage integrase family 252 401 1.6E-11 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_19970 925a4871ecc1d50b182dab6db11d1417 596 Gene3D G3DSA:3.40.50.12780 1 318 2.8E-54 T 11-10-2018 AMS64_19970 925a4871ecc1d50b182dab6db11d1417 596 Gene3D G3DSA:3.40.50.12780 319 454 1.0E-30 T 11-10-2018 AMS64_19970 925a4871ecc1d50b182dab6db11d1417 596 Pfam PF00501 AMP-binding enzyme 12 464 3.1E-90 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMS64_19970 925a4871ecc1d50b182dab6db11d1417 596 SUPERFAMILY SSF56801 5 594 9.94E-106 T 11-10-2018 AMS64_19970 925a4871ecc1d50b182dab6db11d1417 596 ProSitePatterns PS00455 Putative AMP-binding domain signature. 181 192 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMS64_08305 7c0a60f9c629864c182b431095de010b 235 SMART SM00345 9 68 2.0E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_08305 7c0a60f9c629864c182b431095de010b 235 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 4 234 6.6E-123 T 11-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR AMS64_08305 7c0a60f9c629864c182b431095de010b 235 SUPERFAMILY SSF46785 3 78 1.6E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_08305 7c0a60f9c629864c182b431095de010b 235 Gene3D G3DSA:3.40.1410.10 74 233 5.9E-34 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMS64_08305 7c0a60f9c629864c182b431095de010b 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 2.2E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_08305 7c0a60f9c629864c182b431095de010b 235 SMART SM00866 89 228 1.2E-34 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMS64_08305 7c0a60f9c629864c182b431095de010b 235 SUPERFAMILY SSF64288 56 232 1.44E-42 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMS64_08305 7c0a60f9c629864c182b431095de010b 235 Gene3D G3DSA:1.10.10.10 1 73 1.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_08305 7c0a60f9c629864c182b431095de010b 235 Pfam PF07702 UTRA domain 89 226 5.6E-34 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMS64_08305 7c0a60f9c629864c182b431095de010b 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 4.0E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_08305 7c0a60f9c629864c182b431095de010b 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 4.0E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_10700 4068c32183f9a3c13ec1e8d754016a82 322 SUPERFAMILY SSF51569 9 293 2.78E-69 T 11-10-2018 AMS64_10700 4068c32183f9a3c13ec1e8d754016a82 322 Gene3D G3DSA:3.20.20.70 8 305 2.0E-123 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_10700 4068c32183f9a3c13ec1e8d754016a82 322 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 238 247 - T 11-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 AMS64_10700 4068c32183f9a3c13ec1e8d754016a82 322 Pfam PF00682 HMGL-like 12 285 1.0E-50 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMS64_06315 1c895a73d68a102ade96e875b4b4441c 477 Gene3D G3DSA:3.40.50.12160 3 135 2.5E-34 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMS64_06315 1c895a73d68a102ade96e875b4b4441c 477 Pfam PF04055 Radical SAM superfamily 151 325 1.5E-27 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_06315 1c895a73d68a102ade96e875b4b4441c 477 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 2.8E-153 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AMS64_06315 1c895a73d68a102ade96e875b4b4441c 477 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.9E-30 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AMS64_06315 1c895a73d68a102ade96e875b4b4441c 477 Gene3D G3DSA:3.80.30.20 145 376 1.6E-83 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMS64_06315 1c895a73d68a102ade96e875b4b4441c 477 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMS64_06315 1c895a73d68a102ade96e875b4b4441c 477 SUPERFAMILY SSF102114 129 372 1.96E-64 T 11-10-2018 AMS64_06315 1c895a73d68a102ade96e875b4b4441c 477 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 74.727 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AMS64_06315 1c895a73d68a102ade96e875b4b4441c 477 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 439 1.5E-199 T 11-10-2018 AMS64_06315 1c895a73d68a102ade96e875b4b4441c 477 SMART SM00729 147 367 2.7E-66 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMS64_06315 1c895a73d68a102ade96e875b4b4441c 477 Pfam PF01938 TRAM domain 378 439 6.0E-17 T 11-10-2018 IPR002792 TRAM domain AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 Gene3D G3DSA:3.40.190.10 47 354 2.2E-130 T 11-10-2018 AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 148 167 4.1E-64 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 354 373 4.1E-64 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 230 249 4.1E-64 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 127 146 4.1E-64 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 168 187 4.1E-64 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 296 317 4.1E-64 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 67 85 4.1E-64 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 33 51 4.1E-64 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 Pfam PF13416 Bacterial extracellular solute-binding protein 47 341 4.7E-43 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 SUPERFAMILY SSF53850 25 391 2.17E-91 T 11-10-2018 AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 130 147 - T 11-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 AMS64_14800 0567e3d5c48d1bdd7e59e932835b9e00 393 Gene3D G3DSA:3.40.190.10 135 384 2.2E-130 T 11-10-2018 AMS64_03255 da1f088714a3be38127001a5980aebc9 484 SUPERFAMILY SSF53244 323 470 2.38E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMS64_03255 da1f088714a3be38127001a5980aebc9 484 Pfam PF02875 Mur ligase family, glutamate ligase domain 324 414 5.0E-21 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMS64_03255 da1f088714a3be38127001a5980aebc9 484 Gene3D G3DSA:3.40.1190.10 108 321 1.6E-80 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMS64_03255 da1f088714a3be38127001a5980aebc9 484 SUPERFAMILY SSF53623 105 322 1.26E-73 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMS64_03255 da1f088714a3be38127001a5980aebc9 484 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 476 43.591 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_03255 da1f088714a3be38127001a5980aebc9 484 Gene3D G3DSA:3.90.190.20 322 481 2.5E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMS64_03255 da1f088714a3be38127001a5980aebc9 484 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 469 2.5E-177 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_03255 da1f088714a3be38127001a5980aebc9 484 Pfam PF08245 Mur ligase middle domain 124 304 2.6E-28 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMS64_03255 da1f088714a3be38127001a5980aebc9 484 SUPERFAMILY SSF51984 14 106 6.54E-30 T 11-10-2018 AMS64_03255 da1f088714a3be38127001a5980aebc9 484 Pfam PF01225 Mur ligase family, catalytic domain 21 118 6.0E-29 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMS64_03255 da1f088714a3be38127001a5980aebc9 484 Gene3D G3DSA:3.40.50.720 20 107 2.1E-33 T 11-10-2018 AMS64_01825 1cd098f4ff2fb9b95471cf2c6c590865 302 Pfam PF00583 Acetyltransferase (GNAT) family 33 121 4.7E-15 T 11-10-2018 IPR000182 GNAT domain AMS64_01825 1cd098f4ff2fb9b95471cf2c6c590865 302 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 156 295 7.3E-45 T 11-10-2018 IPR012660 Thioesterase, putative AMS64_01825 1cd098f4ff2fb9b95471cf2c6c590865 302 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 163 295 4.4E-37 T 11-10-2018 IPR012660 Thioesterase, putative AMS64_01825 1cd098f4ff2fb9b95471cf2c6c590865 302 Gene3D G3DSA:3.10.129.10 146 296 8.5E-40 T 11-10-2018 AMS64_01825 1cd098f4ff2fb9b95471cf2c6c590865 302 SUPERFAMILY SSF55729 2 146 6.48E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_01825 1cd098f4ff2fb9b95471cf2c6c590865 302 Gene3D G3DSA:3.40.630.30 3 142 1.3E-28 T 11-10-2018 AMS64_01825 1cd098f4ff2fb9b95471cf2c6c590865 302 SUPERFAMILY SSF54637 153 294 1.44E-32 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_17570 cdc07b391f6011c2f1245957cdf613dc 522 SMART SM00387 409 520 1.7E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_17570 cdc07b391f6011c2f1245957cdf613dc 522 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 516 1.9E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_17570 cdc07b391f6011c2f1245957cdf613dc 522 Gene3D G3DSA:3.30.565.10 381 521 2.8E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_17570 cdc07b391f6011c2f1245957cdf613dc 522 SUPERFAMILY SSF55874 384 516 1.3E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_17570 cdc07b391f6011c2f1245957cdf613dc 522 SUPERFAMILY SSF103190 32 161 2.31E-30 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMS64_17570 cdc07b391f6011c2f1245957cdf613dc 522 Pfam PF17203 Single cache domain 3 34 160 4.9E-24 T 11-10-2018 IPR033463 Single cache domain 3 AMS64_17570 cdc07b391f6011c2f1245957cdf613dc 522 Gene3D G3DSA:3.30.450.20 29 159 4.6E-35 T 11-10-2018 AMS64_17570 cdc07b391f6011c2f1245957cdf613dc 522 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 313 370 1.8E-10 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain AMS64_17570 cdc07b391f6011c2f1245957cdf613dc 522 Gene3D G3DSA:3.30.450.20 195 303 1.4E-5 T 11-10-2018 AMS64_17570 cdc07b391f6011c2f1245957cdf613dc 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 2.7E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_17570 cdc07b391f6011c2f1245957cdf613dc 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 2.7E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_17570 cdc07b391f6011c2f1245957cdf613dc 522 SUPERFAMILY SSF55890 315 398 1.03E-9 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AMS64_18270 1711cca8fbd4bb7d3c0906b880dce0bb 345 PIRSF PIRSF006268 1 344 7.2E-110 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AMS64_18270 1711cca8fbd4bb7d3c0906b880dce0bb 345 Gene3D G3DSA:3.10.520.20 21 345 3.3E-118 T 11-10-2018 AMS64_18270 1711cca8fbd4bb7d3c0906b880dce0bb 345 SUPERFAMILY SSF143631 31 342 7.06E-104 T 11-10-2018 IPR003374 ApbE-like superfamily AMS64_18270 1711cca8fbd4bb7d3c0906b880dce0bb 345 Pfam PF02424 ApbE family 38 318 2.0E-87 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 7.2E-34 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 Gene3D G3DSA:3.40.220.10 1 159 7.6E-60 T 11-10-2018 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 SUPERFAMILY SSF52949 1 184 2.18E-52 T 11-10-2018 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 495 41.197 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 347 354 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 486 5.6E-126 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 PRINTS PR00481 Cytosol aminopeptidase signature 262 279 1.6E-56 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 PRINTS PR00481 Cytosol aminopeptidase signature 371 386 1.6E-56 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 PRINTS PR00481 Cytosol aminopeptidase signature 284 305 1.6E-56 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 PRINTS PR00481 Cytosol aminopeptidase signature 343 363 1.6E-56 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 PRINTS PR00481 Cytosol aminopeptidase signature 321 342 1.6E-56 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 Gene3D G3DSA:3.40.630.10 181 495 2.1E-140 T 11-10-2018 AMS64_02350 de5194ce2e9eb4c7aa395b3ebd39bece 502 SUPERFAMILY SSF53187 179 493 3.77E-126 T 11-10-2018 AMS64_05350 1a81c7680fb9020c4acf2c28a451fadb 201 Pfam PF08239 Bacterial SH3 domain 30 80 7.0E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type AMS64_05350 1a81c7680fb9020c4acf2c28a451fadb 201 SMART SM00287 18 83 6.8E-6 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type AMS64_05350 1a81c7680fb9020c4acf2c28a451fadb 201 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 22 199 5.6E-54 T 11-10-2018 IPR016476 SH3 domain protein AMS64_05350 1a81c7680fb9020c4acf2c28a451fadb 201 PIRSF PIRSF006158 2 200 1.1E-55 T 11-10-2018 IPR016476 SH3 domain protein AMS64_05350 1a81c7680fb9020c4acf2c28a451fadb 201 Gene3D G3DSA:2.30.30.40 17 82 1.9E-7 T 11-10-2018 AMS64_09680 35da366abed211fcacf76977caf76665 213 Pfam PF13972 Bacterial transcriptional repressor 62 202 1.7E-39 T 11-10-2018 IPR025722 Bacterial transcriptional repressor TetR AMS64_09680 35da366abed211fcacf76977caf76665 213 Gene3D G3DSA:1.10.357.10 6 213 3.3E-63 T 11-10-2018 AMS64_09680 35da366abed211fcacf76977caf76665 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 6.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_09680 35da366abed211fcacf76977caf76665 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 6.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_09680 35da366abed211fcacf76977caf76665 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 3.2E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_09680 35da366abed211fcacf76977caf76665 213 SUPERFAMILY SSF46689 4 82 5.08E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_01885 e9765646a30c1558b21fb55399750471 143 Pfam PF00581 Rhodanese-like domain 48 134 4.4E-17 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_01885 e9765646a30c1558b21fb55399750471 143 SMART SM00450 40 138 5.4E-23 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_01885 e9765646a30c1558b21fb55399750471 143 SUPERFAMILY SSF52821 20 141 7.73E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_01885 e9765646a30c1558b21fb55399750471 143 Gene3D G3DSA:3.40.250.10 42 143 6.3E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_10290 e9e94e904818dbce4bd69e3468acd88f 627 SUPERFAMILY SSF46785 419 467 4.05E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_10290 e9e94e904818dbce4bd69e3468acd88f 627 Pfam PF09107 Elongation factor SelB, winged helix 576 613 3.2E-7 T 11-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AMS64_10290 e9e94e904818dbce4bd69e3468acd88f 627 Pfam PF03144 Elongation factor Tu domain 2 198 264 9.9E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMS64_10290 e9e94e904818dbce4bd69e3468acd88f 627 Gene3D G3DSA:1.10.10.10 557 615 3.4E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_10290 e9e94e904818dbce4bd69e3468acd88f 627 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 161 5.1E-18 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_10290 e9e94e904818dbce4bd69e3468acd88f 627 Gene3D G3DSA:2.40.30.10 181 295 1.0E-22 T 11-10-2018 AMS64_10290 e9e94e904818dbce4bd69e3468acd88f 627 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 7 363 3.7E-76 T 11-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AMS64_10290 e9e94e904818dbce4bd69e3468acd88f 627 SUPERFAMILY SSF52540 6 199 1.01E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10290 e9e94e904818dbce4bd69e3468acd88f 627 SUPERFAMILY SSF46785 572 613 1.17E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_10290 e9e94e904818dbce4bd69e3468acd88f 627 Gene3D G3DSA:3.40.50.300 2 173 2.3E-42 T 11-10-2018 AMS64_10290 e9e94e904818dbce4bd69e3468acd88f 627 Pfam PF00009 Elongation factor Tu GTP binding domain 8 169 1.8E-28 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_10290 e9e94e904818dbce4bd69e3468acd88f 627 SUPERFAMILY SSF50447 182 266 1.59E-19 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMS64_03170 3daa3cde94e6d060cc918dc5a27c141f 360 Gene3D G3DSA:3.30.750.140 222 334 8.2E-22 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily AMS64_03170 3daa3cde94e6d060cc918dc5a27c141f 360 Pfam PF02120 Flagellar hook-length control protein FliK 243 326 1.1E-18 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AMS64_04600 bd5e8719680375ad30f1a8777a193009 207 SUPERFAMILY SSF46785 6 184 7.49E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_04600 bd5e8719680375ad30f1a8777a193009 207 Gene3D G3DSA:1.10.10.10 2 79 2.3E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_07820 69b2407e26deb0e722fef695dbb011c5 85 Gene3D G3DSA:1.20.58.90 7 85 3.1E-13 T 11-10-2018 AMS64_07820 69b2407e26deb0e722fef695dbb011c5 85 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 15 85 1.3E-24 T 11-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 AMS64_07820 69b2407e26deb0e722fef695dbb011c5 85 SUPERFAMILY SSF140129 7 81 9.68E-27 T 11-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 AMS64_07820 69b2407e26deb0e722fef695dbb011c5 85 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 15 85 2.0E-27 T 11-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 AMS64_13735 69b2407e26deb0e722fef695dbb011c5 85 Gene3D G3DSA:1.20.58.90 7 85 3.1E-13 T 11-10-2018 AMS64_13735 69b2407e26deb0e722fef695dbb011c5 85 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 15 85 1.3E-24 T 11-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 AMS64_13735 69b2407e26deb0e722fef695dbb011c5 85 SUPERFAMILY SSF140129 7 81 9.68E-27 T 11-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 AMS64_13735 69b2407e26deb0e722fef695dbb011c5 85 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 15 85 2.0E-27 T 11-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 AMS64_16175 4ec100e39ea76c6186c866c899588cf6 479 Gene3D G3DSA:3.40.710.10 264 470 4.8E-58 T 11-10-2018 AMS64_16175 4ec100e39ea76c6186c866c899588cf6 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 276 298 3.8E-27 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_16175 4ec100e39ea76c6186c866c899588cf6 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 50 69 3.8E-27 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_16175 4ec100e39ea76c6186c866c899588cf6 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 349 363 3.8E-27 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_16175 4ec100e39ea76c6186c866c899588cf6 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 334 348 3.8E-27 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_16175 4ec100e39ea76c6186c866c899588cf6 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 413 426 3.8E-27 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_16175 4ec100e39ea76c6186c866c899588cf6 479 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 43 433 4.7E-94 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_16175 4ec100e39ea76c6186c866c899588cf6 479 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 27 441 4.8E-95 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_16175 4ec100e39ea76c6186c866c899588cf6 479 SUPERFAMILY SSF56601 24 458 9.56E-81 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMS64_16175 4ec100e39ea76c6186c866c899588cf6 479 Gene3D G3DSA:3.50.80.20 74 173 1.5E-9 T 11-10-2018 AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 Gene3D G3DSA:1.10.10.1100 415 484 9.4E-19 T 11-10-2018 AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 7 532 1.5E-258 T 11-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 Pfam PF04324 BFD-like [2Fe-2S] binding domain 426 479 1.6E-9 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 SUPERFAMILY SSF51905 6 316 2.19E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 Gene3D G3DSA:3.30.9.10 83 315 6.4E-75 T 11-10-2018 AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 6 18 8.6E-19 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 308 314 8.6E-19 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 344 356 8.6E-19 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 47 8.6E-19 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 29 8.6E-19 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 349 359 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 Pfam PF01266 FAD dependent oxidoreductase 8 356 6.5E-51 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMS64_08385 4c0fd913667e3d7795c1509862b30409 557 Gene3D G3DSA:3.50.50.60 8 363 6.4E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_19325 c282a4e3f81b674ad289a5b06b716bff 432 Pfam PF00639 PPIC-type PPIASE domain 181 273 4.8E-20 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AMS64_19325 c282a4e3f81b674ad289a5b06b716bff 432 Gene3D G3DSA:1.10.4030.30 29 281 2.5E-78 T 11-10-2018 AMS64_19325 c282a4e3f81b674ad289a5b06b716bff 432 SUPERFAMILY SSF109998 29 205 3.53E-42 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AMS64_19325 c282a4e3f81b674ad289a5b06b716bff 432 Gene3D G3DSA:3.10.50.40 175 277 2.5E-78 T 11-10-2018 AMS64_19325 c282a4e3f81b674ad289a5b06b716bff 432 Pfam PF09312 SurA N-terminal domain 28 145 3.2E-39 T 11-10-2018 IPR015391 SurA N-terminal AMS64_19325 c282a4e3f81b674ad289a5b06b716bff 432 SUPERFAMILY SSF54534 176 278 1.18E-26 T 11-10-2018 AMS64_19325 c282a4e3f81b674ad289a5b06b716bff 432 SUPERFAMILY SSF54534 283 386 1.57E-32 T 11-10-2018 AMS64_19325 c282a4e3f81b674ad289a5b06b716bff 432 Gene3D G3DSA:3.10.50.40 283 382 3.0E-35 T 11-10-2018 AMS64_19325 c282a4e3f81b674ad289a5b06b716bff 432 Hamap MF_01183 Chaperone SurA [surA]. 4 430 33.964 T 11-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 AMS64_19325 c282a4e3f81b674ad289a5b06b716bff 432 Pfam PF13616 PPIC-type PPIASE domain 282 385 3.8E-26 T 11-10-2018 AMS64_19325 c282a4e3f81b674ad289a5b06b716bff 432 Gene3D G3DSA:1.10.4030.30 383 429 1.3E-5 T 11-10-2018 AMS64_19060 c39d65e43ccf09f869b849f2cb1f194e 306 SUPERFAMILY SSF141523 93 232 1.7E-26 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMS64_19060 c39d65e43ccf09f869b849f2cb1f194e 306 Pfam PF03734 L,D-transpeptidase catalytic domain 99 230 7.8E-17 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMS64_19060 c39d65e43ccf09f869b849f2cb1f194e 306 Gene3D G3DSA:2.40.440.10 22 305 5.7E-87 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMS64_19060 c39d65e43ccf09f869b849f2cb1f194e 306 Pfam PF01476 LysM domain 52 87 1.3E-4 T 11-10-2018 IPR018392 LysM domain AMS64_06295 3fbd838a0556616814b9efaf33ffc7d4 514 Gene3D G3DSA:3.60.110.10 204 482 1.5E-15 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMS64_06295 3fbd838a0556616814b9efaf33ffc7d4 514 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 62 455 1.9E-96 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AMS64_06295 3fbd838a0556616814b9efaf33ffc7d4 514 Pfam PF00795 Carbon-nitrogen hydrolase 220 473 2.5E-34 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMS64_06295 3fbd838a0556616814b9efaf33ffc7d4 514 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 9 493 24.394 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AMS64_06295 3fbd838a0556616814b9efaf33ffc7d4 514 SUPERFAMILY SSF56317 217 489 3.27E-42 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMS64_06860 c91a545098867c118c11b7a279622a8e 225 SMART SM00987 46 207 8.5E-41 T 11-10-2018 AMS64_06860 c91a545098867c118c11b7a279622a8e 225 Pfam PF03167 Uracil DNA glycosylase superfamily 51 206 5.9E-26 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMS64_06860 c91a545098867c118c11b7a279622a8e 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 3 211 9.6E-86 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMS64_06860 c91a545098867c118c11b7a279622a8e 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 54 63 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMS64_06860 c91a545098867c118c11b7a279622a8e 225 SMART SM00986 46 207 8.5E-41 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMS64_06860 c91a545098867c118c11b7a279622a8e 225 SUPERFAMILY SSF52141 3 218 3.92E-94 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMS64_06860 c91a545098867c118c11b7a279622a8e 225 Gene3D G3DSA:3.40.470.10 1 222 3.6E-103 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMS64_06860 c91a545098867c118c11b7a279622a8e 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 1 218 39.36 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMS64_02795 1168ae95db38be774288ac96fdf26921 266 SUPERFAMILY SSF52540 9 238 7.43E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_02795 1168ae95db38be774288ac96fdf26921 266 Pfam PF00005 ABC transporter 26 173 1.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_02795 1168ae95db38be774288ac96fdf26921 266 Gene3D G3DSA:3.40.50.300 7 252 1.7E-65 T 11-10-2018 AMS64_02795 1168ae95db38be774288ac96fdf26921 266 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_02795 1168ae95db38be774288ac96fdf26921 266 SMART SM00382 34 231 2.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 SUPERFAMILY SSF88659 514 616 9.16E-26 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 Pfam PF04542 Sigma-70 region 2 384 453 1.7E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 Pfam PF00140 Sigma-70 factor, region 1.2 97 127 1.8E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 PRINTS PR00046 Major sigma-70 factor signature 432 440 6.6E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 PRINTS PR00046 Major sigma-70 factor signature 592 603 6.6E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 PRINTS PR00046 Major sigma-70 factor signature 556 568 6.6E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 PRINTS PR00046 Major sigma-70 factor signature 577 592 6.6E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 PRINTS PR00046 Major sigma-70 factor signature 408 421 6.6E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 SUPERFAMILY SSF88659 457 530 1.14E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 617 46.563 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 Gene3D G3DSA:1.10.601.10 112 453 4.3E-143 T 11-10-2018 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 Pfam PF04545 Sigma-70, region 4 552 605 1.0E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 Pfam PF03979 Sigma-70 factor, region 1.1 5 80 5.8E-30 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 380 616 4.5E-121 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 408 421 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 SUPERFAMILY SSF88946 114 451 8.11E-100 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 Gene3D G3DSA:1.10.10.10 457 533 8.3E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 Gene3D G3DSA:1.10.10.10 534 618 3.4E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 577 603 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 Gene3D G3DSA:1.10.220.120 1 64 8.8E-31 T 11-10-2018 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 Pfam PF04546 Sigma-70, non-essential region 138 353 7.3E-70 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 380 605 1.6E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMS64_19830 42f93b3c750fc947b4406983b7c42826 618 Pfam PF04539 Sigma-70 region 3 463 539 4.3E-29 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMS64_02545 6e57c219b34d842d9fe2c989fd06dc92 88 Pfam PF01381 Helix-turn-helix 15 65 9.4E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_02545 6e57c219b34d842d9fe2c989fd06dc92 88 Gene3D G3DSA:1.10.260.40 7 88 6.1E-16 T 11-10-2018 AMS64_02545 6e57c219b34d842d9fe2c989fd06dc92 88 SUPERFAMILY SSF47413 11 65 3.1E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_02545 6e57c219b34d842d9fe2c989fd06dc92 88 SMART SM00530 14 69 1.2E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_10710 c9dc041fb357003b980801140bd783a2 253 Gene3D G3DSA:3.40.190.10 27 245 1.3E-12 T 11-10-2018 AMS64_10710 c9dc041fb357003b980801140bd783a2 253 Gene3D G3DSA:3.40.190.10 106 204 1.3E-12 T 11-10-2018 AMS64_10710 c9dc041fb357003b980801140bd783a2 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 246 6.2E-14 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_10710 c9dc041fb357003b980801140bd783a2 253 SUPERFAMILY SSF53850 19 245 6.04E-24 T 11-10-2018 AMS64_10710 c9dc041fb357003b980801140bd783a2 253 SMART SM00062 20 249 8.2E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_19930 63c35b3a069f385578be2480a8614447 528 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 3 526 52.268 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AMS64_19930 63c35b3a069f385578be2480a8614447 528 PRINTS PR00315 GTP-binding elongation factor signature 136 145 6.6E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_19930 63c35b3a069f385578be2480a8614447 528 PRINTS PR00315 GTP-binding elongation factor signature 100 111 6.6E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_19930 63c35b3a069f385578be2480a8614447 528 PRINTS PR00315 GTP-binding elongation factor signature 84 94 6.6E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_19930 63c35b3a069f385578be2480a8614447 528 PRINTS PR00315 GTP-binding elongation factor signature 64 72 6.6E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_19930 63c35b3a069f385578be2480a8614447 528 PRINTS PR00315 GTP-binding elongation factor signature 14 27 6.6E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_19930 63c35b3a069f385578be2480a8614447 528 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 166 6.4E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_19930 63c35b3a069f385578be2480a8614447 528 Gene3D G3DSA:3.40.50.300 71 378 2.0E-118 T 11-10-2018 AMS64_19930 63c35b3a069f385578be2480a8614447 528 Pfam PF03144 Elongation factor Tu domain 2 313 379 2.8E-10 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMS64_19930 63c35b3a069f385578be2480a8614447 528 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 528 0.0 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AMS64_19930 63c35b3a069f385578be2480a8614447 528 SUPERFAMILY SSF52540 9 277 1.28E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19930 63c35b3a069f385578be2480a8614447 528 SUPERFAMILY SSF54980 392 467 3.17E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like AMS64_19930 63c35b3a069f385578be2480a8614447 528 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMS64_19930 63c35b3a069f385578be2480a8614447 528 Gene3D G3DSA:3.30.70.3280 389 528 5.4E-51 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AMS64_19930 63c35b3a069f385578be2480a8614447 528 SUPERFAMILY SSF50447 261 392 1.77E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMS64_19930 63c35b3a069f385578be2480a8614447 528 Pfam PF00009 Elongation factor Tu GTP binding domain 12 276 7.3E-46 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_19930 63c35b3a069f385578be2480a8614447 528 Pfam PF16658 Class II release factor RF3, C-terminal domain 386 513 7.7E-46 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal AMS64_19930 63c35b3a069f385578be2480a8614447 528 Gene3D G3DSA:3.40.50.300 109 274 2.0E-118 T 11-10-2018 AMS64_20425 adf8b2aa90cd9c30fb574382668ed5e7 311 Pfam PF03466 LysR substrate binding domain 82 288 7.0E-48 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_20425 adf8b2aa90cd9c30fb574382668ed5e7 311 Gene3D G3DSA:1.10.10.10 1 83 2.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_20425 adf8b2aa90cd9c30fb574382668ed5e7 311 Gene3D G3DSA:3.40.190.10 85 285 1.2E-63 T 11-10-2018 AMS64_20425 adf8b2aa90cd9c30fb574382668ed5e7 311 SUPERFAMILY SSF53850 83 292 3.62E-50 T 11-10-2018 AMS64_20425 adf8b2aa90cd9c30fb574382668ed5e7 311 Gene3D G3DSA:3.40.190.10 157 259 1.2E-63 T 11-10-2018 AMS64_20425 adf8b2aa90cd9c30fb574382668ed5e7 311 SUPERFAMILY SSF46785 2 105 2.81E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_20425 adf8b2aa90cd9c30fb574382668ed5e7 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 57 6.7E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06705 a148d0ed30e966826d2f68f156fb7740 108 PIRSF PIRSF029143 4 108 2.1E-40 T 11-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 AMS64_06705 a148d0ed30e966826d2f68f156fb7740 108 Pfam PF04266 ASCH domain 10 106 6.3E-16 T 11-10-2018 IPR007374 ASCH domain AMS64_06705 a148d0ed30e966826d2f68f156fb7740 108 Gene3D G3DSA:2.30.130.30 5 106 7.6E-41 T 11-10-2018 AMS64_06705 a148d0ed30e966826d2f68f156fb7740 108 SUPERFAMILY SSF88697 6 105 2.24E-33 T 11-10-2018 IPR015947 PUA-like superfamily AMS64_06705 a148d0ed30e966826d2f68f156fb7740 108 SMART SM01022 9 107 5.7E-32 T 11-10-2018 IPR007374 ASCH domain AMS64_07480 305f5248a4ca11521929e5b97034f740 194 Gene3D G3DSA:1.10.287.990 20 82 4.2E-26 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_07480 305f5248a4ca11521929e5b97034f740 194 SUPERFAMILY SSF54719 84 193 4.45E-43 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_07480 305f5248a4ca11521929e5b97034f740 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 7.7E-35 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_07480 305f5248a4ca11521929e5b97034f740 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 4.4E-37 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_07480 305f5248a4ca11521929e5b97034f740 194 Gene3D G3DSA:2.40.500.20 83 194 4.5E-41 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_07480 305f5248a4ca11521929e5b97034f740 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_07480 305f5248a4ca11521929e5b97034f740 194 SUPERFAMILY SSF46609 1 84 1.44E-35 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_07480 305f5248a4ca11521929e5b97034f740 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.7E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_07480 305f5248a4ca11521929e5b97034f740 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.7E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_07480 305f5248a4ca11521929e5b97034f740 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.7E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_07480 305f5248a4ca11521929e5b97034f740 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.7E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_07480 305f5248a4ca11521929e5b97034f740 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.7E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_07480 305f5248a4ca11521929e5b97034f740 194 PIRSF PIRSF000349 1 194 6.7E-84 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 Hamap MF_00318 Enolase [eno]. 2 417 44.467 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 SUPERFAMILY SSF54826 3 138 7.28E-56 T 11-10-2018 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 SUPERFAMILY SSF51604 144 430 1.41E-127 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 Gene3D G3DSA:3.30.390.10 1 127 6.2E-55 T 11-10-2018 IPR029017 Enolase-like, N-terminal AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 SMART SM01193 4 134 9.3E-93 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 431 1.4E-207 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 Gene3D G3DSA:3.20.20.120 128 433 6.7E-133 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 Pfam PF03952 Enolase, N-terminal domain 4 134 8.4E-58 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 SMART SM01192 143 431 1.9E-213 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 PIRSF PIRSF001400 1 431 2.6E-192 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_04970 58245a22211df4fa0f67a4abfa679782 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 431 9.1E-138 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_02725 5aef8aed1c5986e6751a07c55ea0805e 325 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 25 315 56.003 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AMS64_02725 5aef8aed1c5986e6751a07c55ea0805e 325 Gene3D G3DSA:1.10.150.130 24 118 2.1E-17 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_02725 5aef8aed1c5986e6751a07c55ea0805e 325 Gene3D G3DSA:1.10.443.10 130 309 5.8E-60 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_02725 5aef8aed1c5986e6751a07c55ea0805e 325 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 29 317 2.8E-108 T 11-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 AMS64_02725 5aef8aed1c5986e6751a07c55ea0805e 325 SUPERFAMILY SSF56349 127 313 4.71E-53 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_02725 5aef8aed1c5986e6751a07c55ea0805e 325 SUPERFAMILY SSF47823 27 118 9.81E-9 T 11-10-2018 AMS64_02725 5aef8aed1c5986e6751a07c55ea0805e 325 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 27 110 8.2E-17 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMS64_02725 5aef8aed1c5986e6751a07c55ea0805e 325 Pfam PF00589 Phage integrase family 132 301 3.4E-50 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_02030 9348d0c39db3f4db860c757cada8b632 130 Pfam PF00410 Ribosomal protein S8 5 129 2.2E-47 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02030 9348d0c39db3f4db860c757cada8b632 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.688 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02030 9348d0c39db3f4db860c757cada8b632 130 Gene3D G3DSA:3.30.1370.30 2 72 6.5E-28 T 11-10-2018 AMS64_02030 9348d0c39db3f4db860c757cada8b632 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02030 9348d0c39db3f4db860c757cada8b632 130 Gene3D G3DSA:3.30.1490.10 74 130 5.2E-24 T 11-10-2018 AMS64_02030 9348d0c39db3f4db860c757cada8b632 130 SUPERFAMILY SSF56047 5 129 7.19E-46 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 Gene3D G3DSA:1.10.520.10 27 431 1.3E-215 T 11-10-2018 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 10 727 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 Gene3D G3DSA:1.10.420.20 190 396 1.3E-215 T 11-10-2018 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 Pfam PF00141 Peroxidase 404 701 2.7E-36 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 Pfam PF00141 Peroxidase 69 397 4.9E-52 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 480 506 9.4E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 25 47 9.4E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 51 64 9.4E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 66 91 9.4E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 266 289 9.4E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 Gene3D G3DSA:1.10.420.10 582 703 3.4E-137 T 11-10-2018 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 ProSitePatterns PS00436 Peroxidases active site signature. 89 100 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 Hamap MF_01961 Catalase-peroxidase [katG]. 6 728 39.438 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 Gene3D G3DSA:1.10.520.10 433 727 3.4E-137 T 11-10-2018 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 SUPERFAMILY SSF48113 18 431 5.16E-154 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 SUPERFAMILY SSF48113 436 727 2.95E-104 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 PRINTS PR00458 Haem peroxidase superfamily signature 317 332 5.4E-19 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 PRINTS PR00458 Haem peroxidase superfamily signature 258 273 5.4E-19 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 PRINTS PR00458 Haem peroxidase superfamily signature 149 166 5.4E-19 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 PRINTS PR00458 Haem peroxidase superfamily signature 167 179 5.4E-19 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_13970 e4187bd4d50d3070672bc42fb32741d8 728 PRINTS PR00458 Haem peroxidase superfamily signature 89 103 5.4E-19 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMS64_21700 81ba7e60d5ab6eaebe99bc07a6604b4d 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.5E-70 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMS64_21700 81ba7e60d5ab6eaebe99bc07a6604b4d 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.4E-67 T 11-10-2018 IPR023798 Ribosomal protein S7 domain AMS64_21700 81ba7e60d5ab6eaebe99bc07a6604b4d 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_21700 81ba7e60d5ab6eaebe99bc07a6604b4d 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.149 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMS64_21700 81ba7e60d5ab6eaebe99bc07a6604b4d 156 Gene3D G3DSA:1.10.455.10 2 155 5.3E-63 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AMS64_21700 81ba7e60d5ab6eaebe99bc07a6604b4d 156 SUPERFAMILY SSF47973 6 149 4.19E-61 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AMS64_21700 81ba7e60d5ab6eaebe99bc07a6604b4d 156 PIRSF PIRSF002122 3 156 6.0E-62 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AMS64_15370 3ebed9d5d913976bcdae47e387566443 247 PIRSF PIRSF039085 5 247 5.2E-107 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMS64_15370 3ebed9d5d913976bcdae47e387566443 247 Gene3D G3DSA:3.40.50.300 5 247 2.8E-75 T 11-10-2018 AMS64_15370 3ebed9d5d913976bcdae47e387566443 247 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_15370 3ebed9d5d913976bcdae47e387566443 247 SUPERFAMILY SSF52540 8 242 1.36E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_15370 3ebed9d5d913976bcdae47e387566443 247 Pfam PF00005 ABC transporter 25 172 3.6E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_15370 3ebed9d5d913976bcdae47e387566443 247 SMART SM00382 34 220 1.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_04620 eca705f6c9621604c8ac850e8561f726 151 Pfam PF00293 NUDIX domain 7 127 1.8E-25 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_04620 eca705f6c9621604c8ac850e8561f726 151 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.4E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMS64_04620 eca705f6c9621604c8ac850e8561f726 151 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.4E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMS64_04620 eca705f6c9621604c8ac850e8561f726 151 SUPERFAMILY SSF55811 5 141 5.28E-32 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_04620 eca705f6c9621604c8ac850e8561f726 151 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMS64_04620 eca705f6c9621604c8ac850e8561f726 151 Gene3D G3DSA:3.90.79.10 2 131 2.9E-38 T 11-10-2018 AMS64_01360 99f56beeb53b2d3b37a2851f3d7c2ea2 342 SMART SM00829 12 338 8.3E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMS64_01360 99f56beeb53b2d3b37a2851f3d7c2ea2 342 SUPERFAMILY SSF51735 141 305 2.29E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_01360 99f56beeb53b2d3b37a2851f3d7c2ea2 342 SUPERFAMILY SSF50129 1 173 2.74E-54 T 11-10-2018 IPR011032 GroES-like superfamily AMS64_01360 99f56beeb53b2d3b37a2851f3d7c2ea2 342 Gene3D G3DSA:3.40.50.720 153 286 1.6E-120 T 11-10-2018 AMS64_01360 99f56beeb53b2d3b37a2851f3d7c2ea2 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMS64_01360 99f56beeb53b2d3b37a2851f3d7c2ea2 342 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 2.4E-180 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 AMS64_01360 99f56beeb53b2d3b37a2851f3d7c2ea2 342 Pfam PF00107 Zinc-binding dehydrogenase 174 301 5.5E-27 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMS64_01360 99f56beeb53b2d3b37a2851f3d7c2ea2 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 3.9E-32 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMS64_01360 99f56beeb53b2d3b37a2851f3d7c2ea2 342 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.669 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 AMS64_01360 99f56beeb53b2d3b37a2851f3d7c2ea2 342 Gene3D G3DSA:3.90.180.10 21 328 1.6E-120 T 11-10-2018 AMS64_18920 836df11deef21f2789f0eccc7bf7e962 369 PIRSF PIRSF006769 1 369 2.6E-121 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AMS64_18920 836df11deef21f2789f0eccc7bf7e962 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 91 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMS64_18920 836df11deef21f2789f0eccc7bf7e962 369 Gene3D G3DSA:3.40.430.10 144 368 3.3E-70 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMS64_18920 836df11deef21f2789f0eccc7bf7e962 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 149 367 2.0E-58 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AMS64_18920 836df11deef21f2789f0eccc7bf7e962 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 364 4.1E-125 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AMS64_18920 836df11deef21f2789f0eccc7bf7e962 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 102 8.9E-20 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AMS64_18920 836df11deef21f2789f0eccc7bf7e962 369 SUPERFAMILY SSF53927 6 147 9.7E-48 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMS64_18920 836df11deef21f2789f0eccc7bf7e962 369 SUPERFAMILY SSF53597 149 365 3.27E-55 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMS64_18920 836df11deef21f2789f0eccc7bf7e962 369 Gene3D G3DSA:3.40.140.10 2 143 3.2E-46 T 11-10-2018 AMS64_18920 836df11deef21f2789f0eccc7bf7e962 369 Pfam PF01872 RibD C-terminal domain 150 362 1.4E-49 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMS64_12340 878973986612078dd1cb245ae2e77a56 249 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.13 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AMS64_12340 878973986612078dd1cb245ae2e77a56 249 Gene3D G3DSA:3.90.550.10 1 248 4.1E-97 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_12340 878973986612078dd1cb245ae2e77a56 249 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 4.4E-119 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AMS64_12340 878973986612078dd1cb245ae2e77a56 249 SUPERFAMILY SSF53448 3 247 1.69E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_12340 878973986612078dd1cb245ae2e77a56 249 Pfam PF02348 Cytidylyltransferase 4 221 4.4E-67 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 322 1.1E-50 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 Gene3D G3DSA:1.10.1040.10 192 334 9.0E-52 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 59 86 2.2E-44 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 135 155 2.2E-44 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 9 26 2.2E-44 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 2.2E-44 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 2.2E-44 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 2.2E-44 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 325 37.358 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 SUPERFAMILY SSF48179 183 334 3.06E-55 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 PIRSF PIRSF000114 1 334 4.6E-98 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 Gene3D G3DSA:3.40.50.720 2 190 3.9E-52 T 11-10-2018 AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 SUPERFAMILY SSF51735 6 181 2.66E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_01895 856ad3df5dc0e9ca95e6b486b7db23be 334 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 162 6.4E-47 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMS64_06360 96959637db7256c14f3580604ffe09ff 516 SUPERFAMILY SSF55073 366 512 3.69E-33 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_06360 96959637db7256c14f3580604ffe09ff 516 Gene3D G3DSA:3.30.450.20 98 191 4.5E-14 T 11-10-2018 AMS64_06360 96959637db7256c14f3580604ffe09ff 516 SMART SM00267 350 511 3.5E-35 T 11-10-2018 IPR000160 GGDEF domain AMS64_06360 96959637db7256c14f3580604ffe09ff 516 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 508 4.6E-28 T 11-10-2018 IPR000160 GGDEF domain AMS64_06360 96959637db7256c14f3580604ffe09ff 516 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 506 1.0E-30 T 11-10-2018 IPR000160 GGDEF domain AMS64_06360 96959637db7256c14f3580604ffe09ff 516 Gene3D G3DSA:3.30.70.270 362 516 6.3E-38 T 11-10-2018 AMS64_06360 96959637db7256c14f3580604ffe09ff 516 Pfam PF02743 Cache domain 108 231 3.5E-15 T 11-10-2018 IPR033479 Double Cache domain 1 AMS64_05985 82fe1e41ec54b6a90bf665b0a357d221 203 SUPERFAMILY SSF52266 23 201 7.02E-48 T 11-10-2018 AMS64_05985 82fe1e41ec54b6a90bf665b0a357d221 203 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 185 7.5E-25 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMS64_05985 82fe1e41ec54b6a90bf665b0a357d221 203 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 24 34 - T 11-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AMS64_05985 82fe1e41ec54b6a90bf665b0a357d221 203 Gene3D G3DSA:3.40.50.1110 22 203 2.1E-65 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AMS64_01520 8fe6e9e18b1e0f4544c2d4be553c3c35 270 Gene3D G3DSA:1.20.1080.10 1 257 6.8E-90 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMS64_01520 8fe6e9e18b1e0f4544c2d4be553c3c35 270 Pfam PF01226 Formate/nitrite transporter 26 246 7.6E-61 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AMS64_01520 8fe6e9e18b1e0f4544c2d4be553c3c35 270 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 249 3.5E-79 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AMS64_01520 8fe6e9e18b1e0f4544c2d4be553c3c35 270 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 156 166 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site AMS64_01520 8fe6e9e18b1e0f4544c2d4be553c3c35 270 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site AMS64_16360 0df82a9309656eb1e7fb73ecf2eff32f 311 SUPERFAMILY SSF53590 4 308 4.58E-106 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like AMS64_16360 0df82a9309656eb1e7fb73ecf2eff32f 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 300 3.4E-92 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMS64_16360 0df82a9309656eb1e7fb73ecf2eff32f 311 Gene3D G3DSA:3.90.245.10 1 311 8.0E-131 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like AMS64_16360 0df82a9309656eb1e7fb73ecf2eff32f 311 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 11-10-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 AMS64_11610 b89339dcc3ff9d7e4439cc463f985a1f 367 SUPERFAMILY SSF102114 102 306 1.83E-14 T 11-10-2018 AMS64_11610 b89339dcc3ff9d7e4439cc463f985a1f 367 Gene3D G3DSA:1.10.150.530 5 66 5.6E-27 T 11-10-2018 AMS64_11610 b89339dcc3ff9d7e4439cc463f985a1f 367 PIRSF PIRSF006004 3 360 2.6E-145 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 AMS64_11610 b89339dcc3ff9d7e4439cc463f985a1f 367 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 352 9.1E-164 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AMS64_11610 b89339dcc3ff9d7e4439cc463f985a1f 367 Gene3D G3DSA:3.20.20.70 67 332 7.8E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_11610 b89339dcc3ff9d7e4439cc463f985a1f 367 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 347 73.675 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AMS64_11610 b89339dcc3ff9d7e4439cc463f985a1f 367 Pfam PF04055 Radical SAM superfamily 108 275 2.5E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_14685 53525a75f73cff3faf980e7c325b6f64 231 Gene3D G3DSA:1.20.1440.100 38 108 2.8E-9 T 11-10-2018 AMS64_14685 53525a75f73cff3faf980e7c325b6f64 231 Pfam PF12710 haloacid dehalogenase-like hydrolase 27 198 6.1E-17 T 11-10-2018 AMS64_14685 53525a75f73cff3faf980e7c325b6f64 231 SUPERFAMILY SSF56784 24 200 1.18E-7 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_14685 53525a75f73cff3faf980e7c325b6f64 231 Gene3D G3DSA:3.40.50.1000 30 220 2.8E-9 T 11-10-2018 IPR023214 HAD superfamily AMS64_02470 b386953db03a6a47610f3a1d105c246c 374 Pfam PF10758 Protein of unknown function (DUF2586) 2 366 2.4E-161 T 11-10-2018 IPR019694 Bacteriophage HP1, Orf23 AMS64_14820 67849bd57ae22097d33e9a294f8c55af 261 Gene3D G3DSA:3.40.190.10 37 252 4.7E-83 T 11-10-2018 AMS64_14820 67849bd57ae22097d33e9a294f8c55af 261 Pfam PF03180 NLPA lipoprotein 23 256 5.2E-75 T 11-10-2018 IPR004872 Lipoprotein NlpA family AMS64_14820 67849bd57ae22097d33e9a294f8c55af 261 SUPERFAMILY SSF53850 22 256 3.04E-65 T 11-10-2018 AMS64_14820 67849bd57ae22097d33e9a294f8c55af 261 Gene3D G3DSA:3.40.190.10 102 210 4.7E-83 T 11-10-2018 AMS64_10180 904b56b2be019973da47c0e57899d2e1 294 Gene3D G3DSA:3.40.140.10 180 291 7.0E-26 T 11-10-2018 AMS64_10180 904b56b2be019973da47c0e57899d2e1 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMS64_10180 904b56b2be019973da47c0e57899d2e1 294 PIRSF PIRSF006334 14 294 1.3E-99 T 11-10-2018 AMS64_10180 904b56b2be019973da47c0e57899d2e1 294 SUPERFAMILY SSF53927 1 146 1.19E-39 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMS64_10180 904b56b2be019973da47c0e57899d2e1 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 156 277 4.5E-42 T 11-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AMS64_10180 904b56b2be019973da47c0e57899d2e1 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 45.058 T 11-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AMS64_10180 904b56b2be019973da47c0e57899d2e1 294 SUPERFAMILY SSF53927 153 292 2.37E-36 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMS64_10180 904b56b2be019973da47c0e57899d2e1 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 291 1.6E-84 T 11-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AMS64_10180 904b56b2be019973da47c0e57899d2e1 294 Gene3D G3DSA:3.40.140.10 29 178 1.1E-37 T 11-10-2018 AMS64_10180 904b56b2be019973da47c0e57899d2e1 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 61 144 5.5E-11 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AMS64_20590 3ad28f77c1045f5fb2ac7195c465913f 652 Pfam PF01522 Polysaccharide deacetylase 86 251 4.2E-25 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMS64_20590 3ad28f77c1045f5fb2ac7195c465913f 652 Gene3D G3DSA:3.20.20.370 24 287 2.9E-69 T 11-10-2018 AMS64_20590 3ad28f77c1045f5fb2ac7195c465913f 652 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 28 624 2.4E-242 T 11-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 AMS64_20590 3ad28f77c1045f5fb2ac7195c465913f 652 SUPERFAMILY SSF88713 50 334 2.11E-35 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMS64_20590 3ad28f77c1045f5fb2ac7195c465913f 652 Gene3D G3DSA:3.20.20.80 289 631 1.3E-126 T 11-10-2018 AMS64_20590 3ad28f77c1045f5fb2ac7195c465913f 652 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 301 604 2.6E-119 T 11-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal AMS64_14325 44ab2f9d88e20bfd8c1a8dee6673acdc 184 SUPERFAMILY SSF54593 7 167 2.64E-29 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_14325 44ab2f9d88e20bfd8c1a8dee6673acdc 184 Pfam PF06185 YecM protein 15 121 2.0E-24 T 11-10-2018 IPR010393 Protein of unknown function DUF991 AMS64_14325 44ab2f9d88e20bfd8c1a8dee6673acdc 184 Gene3D G3DSA:3.10.180.10 3 169 1.0E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_08640 8f0f7682860f44d31bb07401d9a8a211 526 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 513 4.6E-285 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AMS64_08640 8f0f7682860f44d31bb07401d9a8a211 526 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 513 9.9E-282 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AMS64_08640 8f0f7682860f44d31bb07401d9a8a211 526 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 526 365.023 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AMS64_13260 154c21dbb1fb6a45bbee4a2b8c94a3ed 404 Gene3D G3DSA:3.40.640.10 53 294 1.7E-141 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_13260 154c21dbb1fb6a45bbee4a2b8c94a3ed 404 Pfam PF00155 Aminotransferase class I and II 36 395 1.1E-46 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMS64_13260 154c21dbb1fb6a45bbee4a2b8c94a3ed 404 Gene3D G3DSA:3.90.1150.10 22 398 1.7E-141 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_13260 154c21dbb1fb6a45bbee4a2b8c94a3ed 404 SUPERFAMILY SSF53383 5 400 9.93E-97 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 SUPERFAMILY SSF118215 9 400 5.49E-120 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 425 38.11 T 11-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 Pfam PF00375 Sodium:dicarboxylate symporter family 9 400 2.2E-110 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 1.5E-36 T 11-10-2018 AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.5E-36 T 11-10-2018 AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 1.5E-36 T 11-10-2018 AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 1.5E-36 T 11-10-2018 AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 1.5E-36 T 11-10-2018 AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 1.5E-36 T 11-10-2018 AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 1.5E-36 T 11-10-2018 AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AMS64_06845 ce9b5d7d190282be6bcbe9a8a53471f7 426 Gene3D G3DSA:1.10.3860.10 1 414 1.1E-119 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_06340 2860dd92beef8a0db006f3c564ec8b63 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 7.6E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06340 2860dd92beef8a0db006f3c564ec8b63 302 Gene3D G3DSA:3.40.190.10 162 267 3.7E-33 T 11-10-2018 AMS64_06340 2860dd92beef8a0db006f3c564ec8b63 302 Gene3D G3DSA:1.10.10.10 1 86 1.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_06340 2860dd92beef8a0db006f3c564ec8b63 302 Pfam PF03466 LysR substrate binding domain 89 287 4.3E-21 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_06340 2860dd92beef8a0db006f3c564ec8b63 302 SUPERFAMILY SSF53850 90 290 6.84E-21 T 11-10-2018 AMS64_06340 2860dd92beef8a0db006f3c564ec8b63 302 Gene3D G3DSA:3.40.190.10 90 285 3.7E-33 T 11-10-2018 AMS64_06340 2860dd92beef8a0db006f3c564ec8b63 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06340 2860dd92beef8a0db006f3c564ec8b63 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06340 2860dd92beef8a0db006f3c564ec8b63 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06340 2860dd92beef8a0db006f3c564ec8b63 302 SUPERFAMILY SSF46785 2 81 1.03E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_21600 4c77b664c725443d88ec5b5cf5e39c88 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_21600 4c77b664c725443d88ec5b5cf5e39c88 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_21600 4c77b664c725443d88ec5b5cf5e39c88 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_21600 4c77b664c725443d88ec5b5cf5e39c88 322 Pfam PF03466 LysR substrate binding domain 98 307 9.4E-20 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_21600 4c77b664c725443d88ec5b5cf5e39c88 322 Gene3D G3DSA:3.40.190.10 182 281 1.1E-55 T 11-10-2018 AMS64_21600 4c77b664c725443d88ec5b5cf5e39c88 322 SUPERFAMILY SSF53850 92 308 1.99E-39 T 11-10-2018 AMS64_21600 4c77b664c725443d88ec5b5cf5e39c88 322 Gene3D G3DSA:1.10.10.10 2 89 5.2E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_21600 4c77b664c725443d88ec5b5cf5e39c88 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 9.5E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_21600 4c77b664c725443d88ec5b5cf5e39c88 322 SUPERFAMILY SSF46785 8 88 3.95E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_21600 4c77b664c725443d88ec5b5cf5e39c88 322 Gene3D G3DSA:3.40.190.10 92 305 1.1E-55 T 11-10-2018 AMS64_06520 a7a98e03b7e9cd39bcf0edc0ba124bd5 1093 SUPERFAMILY SSF50182 925 990 7.19E-17 T 11-10-2018 IPR010920 LSM domain superfamily AMS64_06520 a7a98e03b7e9cd39bcf0edc0ba124bd5 1093 SUPERFAMILY SSF82861 840 923 7.98E-7 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMS64_06520 a7a98e03b7e9cd39bcf0edc0ba124bd5 1093 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 954 988 - T 11-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AMS64_06520 a7a98e03b7e9cd39bcf0edc0ba124bd5 1093 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 488 821 3.5E-93 T 11-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AMS64_06520 a7a98e03b7e9cd39bcf0edc0ba124bd5 1093 SUPERFAMILY SSF82689 993 1091 5.36E-17 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMS64_06520 a7a98e03b7e9cd39bcf0edc0ba124bd5 1093 Pfam PF12795 Mechanosensitive ion channel porin domain 38 264 1.0E-33 T 11-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain AMS64_06520 a7a98e03b7e9cd39bcf0edc0ba124bd5 1093 Gene3D G3DSA:3.30.70.100 993 1085 1.2E-11 T 11-10-2018 AMS64_06520 a7a98e03b7e9cd39bcf0edc0ba124bd5 1093 Pfam PF00924 Mechanosensitive ion channel 883 1079 2.9E-50 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMS64_06520 a7a98e03b7e9cd39bcf0edc0ba124bd5 1093 Gene3D G3DSA:2.30.30.60 940 989 8.4E-11 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMS64_15065 375e08e627f95a0475c27c0dd70bbbba 212 SUPERFAMILY SSF53328 22 161 1.96E-20 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMS64_15065 375e08e627f95a0475c27c0dd70bbbba 212 SUPERFAMILY SSF50486 164 202 2.51E-5 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AMS64_15065 375e08e627f95a0475c27c0dd70bbbba 212 Pfam PF00551 Formyl transferase 23 140 9.9E-7 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMS64_15065 375e08e627f95a0475c27c0dd70bbbba 212 Gene3D G3DSA:3.40.50.12230 1 212 5.4E-28 T 11-10-2018 AMS64_10330 dd639917e655a6257c25bc7bcf161154 213 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_10330 dd639917e655a6257c25bc7bcf161154 213 SMART SM00382 26 213 9.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_10330 dd639917e655a6257c25bc7bcf161154 213 SUPERFAMILY SSF52540 2 199 3.08E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10330 dd639917e655a6257c25bc7bcf161154 213 Pfam PF00005 ABC transporter 18 153 9.3E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_10330 dd639917e655a6257c25bc7bcf161154 213 Gene3D G3DSA:3.40.50.300 1 209 1.8E-42 T 11-10-2018 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 Gene3D G3DSA:3.40.50.20 2 95 3.4E-37 T 11-10-2018 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.8E-82 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 Gene3D G3DSA:3.90.600.10 330 428 9.5E-33 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 Gene3D G3DSA:3.30.470.20 191 329 9.3E-58 T 11-10-2018 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 1.6E-28 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 SUPERFAMILY SSF56059 104 320 2.83E-66 T 11-10-2018 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 SUPERFAMILY SSF52440 1 103 1.19E-35 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 Gene3D G3DSA:3.30.1490.20 121 190 1.7E-28 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 SMART SM01210 330 423 1.4E-51 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 SUPERFAMILY SSF51246 329 424 9.42E-32 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 42.891 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 SMART SM01209 103 296 2.4E-138 T 11-10-2018 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.8E-35 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_19850 3148e1f16f033b60357f6c868cce7472 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 3.3E-180 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_04075 4e2a1ce2261d6f4e482134ac31565e2b 247 SUPERFAMILY SSF52833 76 240 2.48E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_04075 4e2a1ce2261d6f4e482134ac31565e2b 247 ProSitePatterns PS00194 Thioredoxin family active site. 99 117 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMS64_04075 4e2a1ce2261d6f4e482134ac31565e2b 247 Pfam PF13462 Thioredoxin 85 240 2.1E-21 T 11-10-2018 IPR012336 Thioredoxin-like fold AMS64_04075 4e2a1ce2261d6f4e482134ac31565e2b 247 Gene3D G3DSA:3.40.30.10 77 246 1.1E-41 T 11-10-2018 AMS64_11140 ea5f91cc3b507e340c4ef3e3c326f02d 838 Gene3D G3DSA:3.40.50.300 450 752 1.5E-121 T 11-10-2018 AMS64_11140 ea5f91cc3b507e340c4ef3e3c326f02d 838 SMART SM00843 770 835 7.7E-42 T 11-10-2018 IPR018541 FtsK gamma domain AMS64_11140 ea5f91cc3b507e340c4ef3e3c326f02d 838 Pfam PF09397 Ftsk gamma domain 772 832 1.4E-27 T 11-10-2018 IPR018541 FtsK gamma domain AMS64_11140 ea5f91cc3b507e340c4ef3e3c326f02d 838 SUPERFAMILY SSF52540 427 737 8.1E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11140 ea5f91cc3b507e340c4ef3e3c326f02d 838 Pfam PF01580 FtsK/SpoIIIE family 453 666 3.1E-69 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMS64_11140 ea5f91cc3b507e340c4ef3e3c326f02d 838 Gene3D G3DSA:3.30.980.40 345 449 7.0E-35 T 11-10-2018 AMS64_11140 ea5f91cc3b507e340c4ef3e3c326f02d 838 Gene3D G3DSA:1.10.10.10 774 837 8.0E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_11140 ea5f91cc3b507e340c4ef3e3c326f02d 838 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 15 185 4.2E-39 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region AMS64_11140 ea5f91cc3b507e340c4ef3e3c326f02d 838 SUPERFAMILY SSF46785 770 834 9.52E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_19040 d71ffa4c8653f5cd4582addfec37ca54 184 Gene3D G3DSA:2.160.10.10 1 182 1.6E-63 T 11-10-2018 AMS64_19040 d71ffa4c8653f5cd4582addfec37ca54 184 SUPERFAMILY SSF51161 2 178 9.16E-48 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_19040 d71ffa4c8653f5cd4582addfec37ca54 184 Pfam PF12464 Maltose acetyltransferase 6 53 4.5E-10 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMS64_19040 d71ffa4c8653f5cd4582addfec37ca54 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 128 162 7.3E-11 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_19040 d71ffa4c8653f5cd4582addfec37ca54 184 SMART SM01266 4 56 1.8E-12 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMS64_19040 d71ffa4c8653f5cd4582addfec37ca54 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMS64_07295 1d5587185517428ff687967778d1aaec 353 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 21 351 7.8E-98 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_07295 1d5587185517428ff687967778d1aaec 353 Gene3D G3DSA:1.10.220.30 215 353 6.5E-43 T 11-10-2018 AMS64_07295 1d5587185517428ff687967778d1aaec 353 Gene3D G3DSA:1.10.220.30 109 213 7.9E-30 T 11-10-2018 AMS64_07295 1d5587185517428ff687967778d1aaec 353 SUPERFAMILY SSF48029 24 136 1.83E-21 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMS64_07295 1d5587185517428ff687967778d1aaec 353 PIRSF PIRSF003161 19 353 8.6E-116 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_07295 1d5587185517428ff687967778d1aaec 353 Gene3D G3DSA:1.10.220.30 20 104 5.0E-17 T 11-10-2018 AMS64_07295 1d5587185517428ff687967778d1aaec 353 Pfam PF14841 FliG middle domain 136 206 3.7E-27 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AMS64_07295 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 292 318 5.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_07295 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 5.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_07295 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 54 80 5.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_07295 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 25 41 5.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_07295 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 134 157 5.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_07295 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 268 288 5.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_07295 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 215 240 5.8E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_07295 1d5587185517428ff687967778d1aaec 353 Pfam PF14842 FliG N-terminal domain 24 124 2.1E-28 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AMS64_07295 1d5587185517428ff687967778d1aaec 353 Pfam PF01706 FliG C-terminal domain 238 344 7.3E-41 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AMS64_07295 1d5587185517428ff687967778d1aaec 353 SUPERFAMILY SSF48029 134 344 3.4E-69 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMS64_01645 15ed19d8d58620fb36a099c0c5adf146 276 Gene3D G3DSA:1.10.3210.10 2 274 8.4E-72 T 11-10-2018 AMS64_01645 15ed19d8d58620fb36a099c0c5adf146 276 SUPERFAMILY SSF109604 4 269 1.22E-69 T 11-10-2018 AMS64_01645 15ed19d8d58620fb36a099c0c5adf146 276 Pfam PF08668 HDOD domain 13 204 4.8E-57 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AMS64_04140 7fd6b06eb700ff27b90e58732e404e6b 259 Gene3D G3DSA:1.10.3470.10 28 259 4.2E-10 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_04140 7fd6b06eb700ff27b90e58732e404e6b 259 Pfam PF00950 ABC 3 transport family 3 256 4.2E-76 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AMS64_04140 7fd6b06eb700ff27b90e58732e404e6b 259 SUPERFAMILY SSF81345 3 257 3.27E-40 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_00610 e26a15deb23543ece391e55183116559 253 PIRSF PIRSF028069 2 251 1.6E-71 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AMS64_00610 e26a15deb23543ece391e55183116559 253 Pfam PF11932 Protein of unknown function (DUF3450) 13 243 2.2E-69 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 Gene3D G3DSA:1.10.1240.10 656 744 2.6E-40 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 SMART SM01018 664 747 2.7E-45 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 SUPERFAMILY SSF52242 749 901 5.49E-44 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 SUPERFAMILY SSF56507 910 1231 6.28E-129 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 Pfam PF02574 Homocysteine S-methyltransferase 25 333 4.9E-79 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 Gene3D G3DSA:1.10.288.10 944 1100 1.2E-144 T 11-10-2018 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 Pfam PF02607 B12 binding domain 668 739 3.7E-25 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 TIGRFAM TIGR02082 metH: methionine synthase 21 1200 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 SUPERFAMILY SSF82282 15 407 1.83E-116 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 Gene3D G3DSA:3.10.196.10 915 1231 1.2E-144 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 Gene3D G3DSA:3.20.20.20 348 650 2.4E-131 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 Pfam PF00809 Pterin binding enzyme 368 606 2.1E-60 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 Gene3D G3DSA:3.40.50.280 751 902 3.6E-56 T 11-10-2018 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 946 1216 2.6E-124 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 Pfam PF02310 B12 binding domain 755 848 3.8E-18 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 PIRSF PIRSF000381 9 1203 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 SUPERFAMILY SSF51717 364 638 1.44E-88 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 SUPERFAMILY SSF47644 659 746 7.59E-29 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_21200 579152824bd1182b9ae5dec6d314ee3c 1231 Gene3D G3DSA:3.20.20.330 9 347 3.6E-123 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AMS64_22440 02272e4359a1b8a1172d5843974822ae 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_22440 02272e4359a1b8a1172d5843974822ae 443 SUPERFAMILY SSF53383 16 440 6.05E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_22440 02272e4359a1b8a1172d5843974822ae 443 Pfam PF00202 Aminotransferase class-III 29 439 6.1E-93 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_22440 02272e4359a1b8a1172d5843974822ae 443 Gene3D G3DSA:3.40.640.10 65 345 3.0E-150 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_22440 02272e4359a1b8a1172d5843974822ae 443 Gene3D G3DSA:3.90.1150.10 29 433 3.0E-150 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_21040 a9a711e9ad02c50f898dfacced4277d1 132 PIRSF PIRSF016821 8 132 2.6E-42 T 11-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AMS64_21040 a9a711e9ad02c50f898dfacced4277d1 132 SMART SM00363 11 76 1.0E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_21040 a9a711e9ad02c50f898dfacced4277d1 132 Gene3D G3DSA:3.10.290.10 4 110 3.7E-37 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMS64_21040 a9a711e9ad02c50f898dfacced4277d1 132 SUPERFAMILY SSF55174 8 106 3.27E-30 T 11-10-2018 AMS64_21040 a9a711e9ad02c50f898dfacced4277d1 132 Pfam PF01479 S4 domain 11 57 5.7E-13 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_13835 ccbe9f29287e076028fbd3b852fe9e68 93 Gene3D G3DSA:1.20.1280.80 1 91 8.2E-33 T 11-10-2018 IPR038347 TyeA superfamily AMS64_13835 ccbe9f29287e076028fbd3b852fe9e68 93 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 90 2.0E-44 T 11-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA AMS64_13835 ccbe9f29287e076028fbd3b852fe9e68 93 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 4 84 9.7E-26 T 11-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related AMS64_13835 ccbe9f29287e076028fbd3b852fe9e68 93 Pfam PF09059 TyeA 6 86 2.2E-29 T 11-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA AMS64_13835 ccbe9f29287e076028fbd3b852fe9e68 93 SUPERFAMILY SSF140591 2 90 2.63E-28 T 11-10-2018 AMS64_07720 ccbe9f29287e076028fbd3b852fe9e68 93 Gene3D G3DSA:1.20.1280.80 1 91 8.2E-33 T 11-10-2018 IPR038347 TyeA superfamily AMS64_07720 ccbe9f29287e076028fbd3b852fe9e68 93 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 90 2.0E-44 T 11-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA AMS64_07720 ccbe9f29287e076028fbd3b852fe9e68 93 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 4 84 9.7E-26 T 11-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related AMS64_07720 ccbe9f29287e076028fbd3b852fe9e68 93 Pfam PF09059 TyeA 6 86 2.2E-29 T 11-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA AMS64_07720 ccbe9f29287e076028fbd3b852fe9e68 93 SUPERFAMILY SSF140591 2 90 2.63E-28 T 11-10-2018 AMS64_03225 7ab854b0a3c25e4bbb0e1ab94474b559 510 Gene3D G3DSA:3.40.1190.10 117 352 2.3E-81 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMS64_03225 7ab854b0a3c25e4bbb0e1ab94474b559 510 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 37 502 2.7E-170 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AMS64_03225 7ab854b0a3c25e4bbb0e1ab94474b559 510 Gene3D G3DSA:3.90.190.20 353 506 4.5E-56 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMS64_03225 7ab854b0a3c25e4bbb0e1ab94474b559 510 SUPERFAMILY SSF53244 350 504 2.29E-49 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMS64_03225 7ab854b0a3c25e4bbb0e1ab94474b559 510 SUPERFAMILY SSF63418 22 115 5.23E-23 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AMS64_03225 7ab854b0a3c25e4bbb0e1ab94474b559 510 Pfam PF08245 Mur ligase middle domain 126 329 2.1E-48 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMS64_03225 7ab854b0a3c25e4bbb0e1ab94474b559 510 Pfam PF02875 Mur ligase family, glutamate ligase domain 350 435 1.9E-23 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMS64_03225 7ab854b0a3c25e4bbb0e1ab94474b559 510 Gene3D G3DSA:3.40.1390.10 18 116 4.3E-26 T 11-10-2018 AMS64_03225 7ab854b0a3c25e4bbb0e1ab94474b559 510 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 11 502 34.217 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AMS64_03225 7ab854b0a3c25e4bbb0e1ab94474b559 510 Pfam PF01225 Mur ligase family, catalytic domain 39 114 2.1E-12 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMS64_03225 7ab854b0a3c25e4bbb0e1ab94474b559 510 SUPERFAMILY SSF53623 117 349 2.49E-74 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMS64_10010 200f5dfde63b3b2d2841c7b8b014ebc7 316 Gene3D G3DSA:3.40.50.300 17 183 1.0E-44 T 11-10-2018 AMS64_10010 200f5dfde63b3b2d2841c7b8b014ebc7 316 SUPERFAMILY SSF52540 6 288 3.93E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10010 200f5dfde63b3b2d2841c7b8b014ebc7 316 PIRSF PIRSF002849 1 316 3.2E-118 T 11-10-2018 AMS64_10010 200f5dfde63b3b2d2841c7b8b014ebc7 316 Gene3D G3DSA:1.10.8.300 197 313 4.7E-30 T 11-10-2018 AMS64_10010 200f5dfde63b3b2d2841c7b8b014ebc7 316 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.1E-60 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMS64_09070 854cbe39ad6dc2a92a14d81f87aaaf82 346 Pfam PF13551 Winged helix-turn helix 10 74 2.4E-7 T 11-10-2018 AMS64_09070 854cbe39ad6dc2a92a14d81f87aaaf82 346 SUPERFAMILY SSF53098 164 330 4.17E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_09070 854cbe39ad6dc2a92a14d81f87aaaf82 346 Pfam PF00665 Integrase core domain 162 282 2.0E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_09070 854cbe39ad6dc2a92a14d81f87aaaf82 346 Gene3D G3DSA:3.30.420.10 160 327 2.8E-15 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_09070 854cbe39ad6dc2a92a14d81f87aaaf82 346 SUPERFAMILY SSF46689 12 114 3.94E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_05765 cc98b4158edfc8deb3846a15938beedb 114 Pfam PF11169 Protein of unknown function (DUF2956) 8 110 2.2E-40 T 11-10-2018 IPR021339 Protein of unknown function DUF2956 AMS64_06835 1410be961322ee1581140ca267b85041 266 Pfam PF13369 Transglutaminase-like superfamily 52 182 3.2E-38 T 11-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AMS64_06835 1410be961322ee1581140ca267b85041 266 SUPERFAMILY SSF48452 187 248 1.52E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_06835 1410be961322ee1581140ca267b85041 266 Pfam PF13371 Tetratricopeptide repeat 185 256 4.1E-25 T 11-10-2018 AMS64_07965 c114e3fdc6c8106de7849ef70a010fb4 531 PIRSF PIRSF002741 11 531 4.3E-104 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMS64_07965 c114e3fdc6c8106de7849ef70a010fb4 531 Gene3D G3DSA:3.90.76.10 37 209 4.7E-158 T 11-10-2018 AMS64_07965 c114e3fdc6c8106de7849ef70a010fb4 531 SUPERFAMILY SSF53850 27 528 7.6E-141 T 11-10-2018 AMS64_07965 c114e3fdc6c8106de7849ef70a010fb4 531 Gene3D G3DSA:3.10.105.10 289 507 4.7E-158 T 11-10-2018 AMS64_07965 c114e3fdc6c8106de7849ef70a010fb4 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 448 1.9E-91 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AMS64_07965 c114e3fdc6c8106de7849ef70a010fb4 531 Gene3D G3DSA:3.40.190.10 210 519 4.7E-158 T 11-10-2018 AMS64_08465 e453d788af162a20bc7de39587f1b215 499 SUPERFAMILY SSF53187 171 484 2.09E-95 T 11-10-2018 AMS64_08465 e453d788af162a20bc7de39587f1b215 499 Gene3D G3DSA:3.40.630.10 160 487 2.5E-108 T 11-10-2018 AMS64_08465 e453d788af162a20bc7de39587f1b215 499 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 174 478 4.6E-100 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMS64_08465 e453d788af162a20bc7de39587f1b215 499 PRINTS PR00481 Cytosol aminopeptidase signature 250 267 4.0E-41 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_08465 e453d788af162a20bc7de39587f1b215 499 PRINTS PR00481 Cytosol aminopeptidase signature 309 330 4.0E-41 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_08465 e453d788af162a20bc7de39587f1b215 499 PRINTS PR00481 Cytosol aminopeptidase signature 331 351 4.0E-41 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_08465 e453d788af162a20bc7de39587f1b215 499 PRINTS PR00481 Cytosol aminopeptidase signature 359 374 4.0E-41 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_08465 e453d788af162a20bc7de39587f1b215 499 PRINTS PR00481 Cytosol aminopeptidase signature 272 293 4.0E-41 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_02835 65d72b93c865dabfcbf6860984dfa8e7 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMS64_02835 65d72b93c865dabfcbf6860984dfa8e7 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 4.7E-33 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMS64_02835 65d72b93c865dabfcbf6860984dfa8e7 148 SUPERFAMILY SSF55804 1 146 1.96E-39 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_02835 65d72b93c865dabfcbf6860984dfa8e7 148 Gene3D G3DSA:3.40.930.10 1 148 1.2E-53 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_02835 65d72b93c865dabfcbf6860984dfa8e7 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 146 4.0E-50 T 11-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 AMS64_22330 8d7272c76061a008a04ed97cd4052603 157 Hamap MF_00598 Protein Smg [smg]. 1 157 32.204 T 11-10-2018 IPR007456 Smg AMS64_22330 8d7272c76061a008a04ed97cd4052603 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 1.6E-60 T 11-10-2018 IPR007456 Smg AMS64_21565 53dc96cefef898376cfbc8e6bc44c48b 717 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 38 436 1.6E-104 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMS64_21565 53dc96cefef898376cfbc8e6bc44c48b 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 567 587 2.0E-54 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMS64_21565 53dc96cefef898376cfbc8e6bc44c48b 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 509 533 2.0E-54 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMS64_21565 53dc96cefef898376cfbc8e6bc44c48b 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 537 556 2.0E-54 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMS64_21565 53dc96cefef898376cfbc8e6bc44c48b 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 625 640 2.0E-54 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMS64_21565 53dc96cefef898376cfbc8e6bc44c48b 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 483 501 2.0E-54 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMS64_21565 53dc96cefef898376cfbc8e6bc44c48b 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 643 665 2.0E-54 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMS64_21565 53dc96cefef898376cfbc8e6bc44c48b 717 Gene3D G3DSA:3.40.50.1820 56 711 4.1E-260 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_21565 53dc96cefef898376cfbc8e6bc44c48b 717 SUPERFAMILY SSF50993 34 439 1.12E-94 T 11-10-2018 AMS64_21565 53dc96cefef898376cfbc8e6bc44c48b 717 Pfam PF00326 Prolyl oligopeptidase family 499 711 9.7E-72 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMS64_21565 53dc96cefef898376cfbc8e6bc44c48b 717 SUPERFAMILY SSF53474 446 695 1.47E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_21565 53dc96cefef898376cfbc8e6bc44c48b 717 Gene3D G3DSA:2.130.10.120 107 437 4.1E-260 T 11-10-2018 AMS64_16375 588c67e403e8afbe976fcb37f7ab297b 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMS64_16375 588c67e403e8afbe976fcb37f7ab297b 383 Gene3D G3DSA:1.20.1090.10 186 383 7.9E-73 T 11-10-2018 AMS64_16375 588c67e403e8afbe976fcb37f7ab297b 383 SUPERFAMILY SSF56796 3 382 1.96E-133 T 11-10-2018 AMS64_16375 588c67e403e8afbe976fcb37f7ab297b 383 Gene3D G3DSA:3.40.50.1970 1 184 9.2E-61 T 11-10-2018 AMS64_16375 588c67e403e8afbe976fcb37f7ab297b 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMS64_16375 588c67e403e8afbe976fcb37f7ab297b 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 375 2.5E-126 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AMS64_06235 ba28da1184d58cda4e1d590f088ce172 164 Pfam PF07295 Zinc-ribbon containing domain 18 161 8.2E-46 T 11-10-2018 IPR009912 Zinc-ribbon containing domain AMS64_05665 4eb71e57d08c03c03505d6daec0c53aa 368 SUPERFAMILY SSF56935 22 368 3.4E-58 T 11-10-2018 AMS64_05665 4eb71e57d08c03c03505d6daec0c53aa 368 Gene3D G3DSA:2.40.160.10 22 368 1.0E-92 T 11-10-2018 IPR023614 Porin domain superfamily AMS64_05665 4eb71e57d08c03c03505d6daec0c53aa 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.9E-14 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AMS64_05665 4eb71e57d08c03c03505d6daec0c53aa 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 275 294 2.9E-14 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AMS64_05665 4eb71e57d08c03c03505d6daec0c53aa 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 247 264 2.9E-14 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AMS64_05665 4eb71e57d08c03c03505d6daec0c53aa 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 91 113 2.9E-14 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AMS64_05665 4eb71e57d08c03c03505d6daec0c53aa 368 Pfam PF00267 Gram-negative porin 29 368 1.4E-53 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AMS64_07345 ea9fdbd76b723ef94f89112601b03914 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.2E-25 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_07345 ea9fdbd76b723ef94f89112601b03914 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.0E-11 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_07345 ea9fdbd76b723ef94f89112601b03914 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.0E-11 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_07345 ea9fdbd76b723ef94f89112601b03914 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.0E-11 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_07345 ea9fdbd76b723ef94f89112601b03914 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.4E-27 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AMS64_07345 ea9fdbd76b723ef94f89112601b03914 89 PIRSF PIRSF004669 1 89 7.5E-25 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_18850 5d54e341ead351cceb7a3e8c66a3ec8a 83 SUPERFAMILY SSF116842 2 70 2.75E-20 T 11-10-2018 AMS64_18850 5d54e341ead351cceb7a3e8c66a3ec8a 83 Gene3D G3DSA:1.10.287.1040 5 83 1.2E-22 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 AMS64_18850 5d54e341ead351cceb7a3e8c66a3ec8a 83 Pfam PF02609 Exonuclease VII small subunit 11 62 1.3E-18 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMS64_18850 5d54e341ead351cceb7a3e8c66a3ec8a 83 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 2.6E-21 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMS64_18850 5d54e341ead351cceb7a3e8c66a3ec8a 83 PIRSF PIRSF006488 1 82 7.4E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMS64_18850 5d54e341ead351cceb7a3e8c66a3ec8a 83 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 51 4.0E-12 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMS64_18850 5d54e341ead351cceb7a3e8c66a3ec8a 83 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.052 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMS64_20440 94973c3524c40c657f75be34e713eeeb 377 PIRSF PIRSF006078 1 376 5.7E-135 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AMS64_20440 94973c3524c40c657f75be34e713eeeb 377 Pfam PF02595 Glycerate kinase family 3 373 9.0E-147 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AMS64_20440 94973c3524c40c657f75be34e713eeeb 377 Gene3D G3DSA:3.90.1510.10 42 276 1.3E-138 T 11-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 AMS64_20440 94973c3524c40c657f75be34e713eeeb 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 3.6E-158 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AMS64_20440 94973c3524c40c657f75be34e713eeeb 377 Gene3D G3DSA:3.40.50.10350 2 360 1.3E-138 T 11-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold AMS64_20440 94973c3524c40c657f75be34e713eeeb 377 SUPERFAMILY SSF110738 1 375 3.53E-140 T 11-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 AMS64_22550 2350e04ce4b470ee5df38ccdf98dc625 642 Pfam PF00665 Integrase core domain 245 381 1.0E-17 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_22550 2350e04ce4b470ee5df38ccdf98dc625 642 Gene3D G3DSA:3.30.420.10 243 449 1.1E-34 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_22550 2350e04ce4b470ee5df38ccdf98dc625 642 Pfam PF09299 Mu transposase, C-terminal 467 529 2.5E-9 T 11-10-2018 IPR015378 Transposase-like, Mu, C-terminal AMS64_22550 2350e04ce4b470ee5df38ccdf98dc625 642 SUPERFAMILY SSF53098 240 437 2.28E-25 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_22550 2350e04ce4b470ee5df38ccdf98dc625 642 Pfam PF13518 Helix-turn-helix domain 94 152 4.5E-7 T 11-10-2018 AMS64_21920 b80c1d978f34ad37c7d48a22e89708d4 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 215 1.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21920 b80c1d978f34ad37c7d48a22e89708d4 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 1.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21920 b80c1d978f34ad37c7d48a22e89708d4 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 1.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21920 b80c1d978f34ad37c7d48a22e89708d4 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21920 b80c1d978f34ad37c7d48a22e89708d4 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 228 1.4E-27 T 11-10-2018 AMS64_21920 b80c1d978f34ad37c7d48a22e89708d4 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_21920 b80c1d978f34ad37c7d48a22e89708d4 234 SUPERFAMILY SSF51735 2 230 2.34E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_21920 b80c1d978f34ad37c7d48a22e89708d4 234 Gene3D G3DSA:3.40.50.720 1 233 1.8E-48 T 11-10-2018 AMS64_11765 7bf486107d5e7f3db5e2ed184e913631 641 SUPERFAMILY SSF141868 410 634 5.1E-42 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_11765 7bf486107d5e7f3db5e2ed184e913631 641 Pfam PF00563 EAL domain 411 634 1.7E-42 T 11-10-2018 IPR001633 EAL domain AMS64_11765 7bf486107d5e7f3db5e2ed184e913631 641 Gene3D G3DSA:3.20.20.450 407 639 2.7E-42 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_11765 7bf486107d5e7f3db5e2ed184e913631 641 Gene3D G3DSA:3.30.70.270 191 393 2.5E-20 T 11-10-2018 AMS64_11765 7bf486107d5e7f3db5e2ed184e913631 641 Gene3D G3DSA:3.30.1040.50 102 150 3.1E-13 T 11-10-2018 AMS64_11765 7bf486107d5e7f3db5e2ed184e913631 641 SUPERFAMILY SSF55073 243 393 2.9E-16 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_11765 7bf486107d5e7f3db5e2ed184e913631 641 SMART SM00267 226 394 9.3E-8 T 11-10-2018 IPR000160 GGDEF domain AMS64_11765 7bf486107d5e7f3db5e2ed184e913631 641 Pfam PF16448 LapD/MoxY periplasmic domain 24 146 3.8E-40 T 11-10-2018 IPR032244 LapD/MoxY, periplasmic domain AMS64_11765 7bf486107d5e7f3db5e2ed184e913631 641 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 388 1.2E-12 T 11-10-2018 IPR000160 GGDEF domain AMS64_11765 7bf486107d5e7f3db5e2ed184e913631 641 SMART SM00052 403 641 3.2E-11 T 11-10-2018 IPR001633 EAL domain AMS64_06645 f0c453ae679616f822f2c0048fa1dc6a 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 3.3E-141 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AMS64_06645 f0c453ae679616f822f2c0048fa1dc6a 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 9.7E-138 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AMS64_06645 f0c453ae679616f822f2c0048fa1dc6a 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 5.4E-142 T 11-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AMS64_06645 f0c453ae679616f822f2c0048fa1dc6a 339 SUPERFAMILY SSF55729 1 338 1.38E-131 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_06645 f0c453ae679616f822f2c0048fa1dc6a 339 Gene3D G3DSA:3.40.630.30 1 273 1.0E-114 T 11-10-2018 AMS64_14525 352514b1a38abf8d80851d936fc18c9b 322 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 208 221 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14525 352514b1a38abf8d80851d936fc18c9b 322 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 53 68 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14525 352514b1a38abf8d80851d936fc18c9b 322 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 7 320 23.972 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14525 352514b1a38abf8d80851d936fc18c9b 322 Pfam PF00146 NADH dehydrogenase 15 314 4.7E-120 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_22305 32c1be32b775276cc2590ce6be51913d 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 32.06 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AMS64_22305 32c1be32b775276cc2590ce6be51913d 273 SUPERFAMILY SSF53223 1 101 1.9E-31 T 11-10-2018 AMS64_22305 32c1be32b775276cc2590ce6be51913d 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 1.3E-25 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AMS64_22305 32c1be32b775276cc2590ce6be51913d 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 270 2.5E-83 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AMS64_22305 32c1be32b775276cc2590ce6be51913d 273 SUPERFAMILY SSF51735 102 268 8.35E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_22305 32c1be32b775276cc2590ce6be51913d 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 191 3.0E-11 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMS64_22305 32c1be32b775276cc2590ce6be51913d 273 Gene3D G3DSA:3.40.50.720 115 236 3.0E-83 T 11-10-2018 AMS64_22305 32c1be32b775276cc2590ce6be51913d 273 Gene3D G3DSA:3.40.50.10860 6 257 3.0E-83 T 11-10-2018 AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 Gene3D G3DSA:3.40.50.970 168 534 1.9E-147 T 11-10-2018 AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.1E-16 T 11-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 Pfam PF02779 Transketolase, pyrimidine binding domain 594 788 2.7E-64 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 PIRSF PIRSF000157 1 935 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 SUPERFAMILY SSF52518 576 794 9.81E-53 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 933 4.4E-52 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 Gene3D G3DSA:1.10.287.1150 85 167 1.4E-27 T 11-10-2018 AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 Gene3D G3DSA:3.40.50.12470 557 803 2.4E-168 T 11-10-2018 AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 SMART SM00861 594 787 5.3E-60 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 Gene3D G3DSA:3.40.50.11610 724 930 2.4E-168 T 11-10-2018 AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 Pfam PF00676 Dehydrogenase E1 component 219 517 3.0E-52 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AMS64_08265 7c263fa858ff4e6ca5a19a3f660253ff 935 SUPERFAMILY SSF52518 156 555 2.12E-86 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_06985 6a90ac716ae9fecd3c0e245b189967e8 118 SUPERFAMILY SSF46767 15 92 1.11E-16 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AMS64_06985 6a90ac716ae9fecd3c0e245b189967e8 118 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 15 91 5.9E-17 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMS64_06985 6a90ac716ae9fecd3c0e245b189967e8 118 Gene3D G3DSA:1.10.10.10 11 112 3.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 Gene3D G3DSA:2.40.30.10 233 437 3.4E-67 T 11-10-2018 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 SUPERFAMILY SSF52218 64 210 5.52E-47 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 Gene3D G3DSA:1.20.990.10 281 381 3.4E-67 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 Pfam PF00258 Flavodoxin 67 194 1.4E-33 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PRINTS PR00369 Flavodoxin signature 146 156 1.9E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PRINTS PR00369 Flavodoxin signature 170 189 1.9E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PRINTS PR00369 Flavodoxin signature 66 79 1.9E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PRINTS PR00369 Flavodoxin signature 114 125 1.9E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 597 3.1E-245 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PIRSF PIRSF000207 1 597 9.9E-251 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 Gene3D G3DSA:3.40.50.360 58 220 7.6E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 SUPERFAMILY SSF52343 442 597 8.51E-52 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 Pfam PF00175 Oxidoreductase NAD-binding domain 455 561 5.3E-19 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 Gene3D G3DSA:3.40.50.80 443 597 5.0E-59 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 SUPERFAMILY SSF63380 230 444 3.83E-60 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 Pfam PF00667 FAD binding domain 232 299 1.5E-12 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 Pfam PF00667 FAD binding domain 333 422 1.6E-13 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 271 281 5.6E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 417 426 5.6E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 454 473 5.6E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 479 488 5.6E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 523 539 5.6E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 383 390 5.6E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 492 503 5.6E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_06080 9d0c48cff5a87c2cc0c5f88a98f099db 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 546 554 5.6E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_18205 cc213aa2ae36cad3d69a7cc109b1e3d9 160 Gene3D G3DSA:3.30.70.990 9 94 4.7E-27 T 11-10-2018 IPR035570 UPF0234, N-terminal AMS64_18205 cc213aa2ae36cad3d69a7cc109b1e3d9 160 Gene3D G3DSA:3.30.70.860 95 160 3.4E-31 T 11-10-2018 IPR035571 UPF0234-like, C-terminal AMS64_18205 cc213aa2ae36cad3d69a7cc109b1e3d9 160 SUPERFAMILY SSF89963 88 160 7.59E-30 T 11-10-2018 IPR036183 YajQ-like superfamily AMS64_18205 cc213aa2ae36cad3d69a7cc109b1e3d9 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.325 T 11-10-2018 IPR007551 Protein of unknown function DUF520 AMS64_18205 cc213aa2ae36cad3d69a7cc109b1e3d9 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 1.6E-63 T 11-10-2018 IPR007551 Protein of unknown function DUF520 AMS64_18205 cc213aa2ae36cad3d69a7cc109b1e3d9 160 SUPERFAMILY SSF89963 2 86 1.52E-29 T 11-10-2018 IPR036183 YajQ-like superfamily AMS64_11695 343adcf7668d4b8c0df07158a506c57e 122 Pfam PF00581 Rhodanese-like domain 25 115 9.4E-15 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_11695 343adcf7668d4b8c0df07158a506c57e 122 SMART SM00450 18 119 1.0E-16 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_11695 343adcf7668d4b8c0df07158a506c57e 122 Gene3D G3DSA:3.40.250.10 4 122 6.5E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_11695 343adcf7668d4b8c0df07158a506c57e 122 SUPERFAMILY SSF52821 5 122 1.31E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_05360 08a9e8fceac4bfe6ef084abb8cfca480 259 SUPERFAMILY SSF55811 83 249 2.03E-35 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_05360 08a9e8fceac4bfe6ef084abb8cfca480 259 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 97 121 2.4E-10 T 11-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AMS64_05360 08a9e8fceac4bfe6ef084abb8cfca480 259 Gene3D G3DSA:3.90.79.10 129 256 8.9E-36 T 11-10-2018 AMS64_05360 08a9e8fceac4bfe6ef084abb8cfca480 259 ProSitePatterns PS00893 Nudix box signature. 165 186 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMS64_05360 08a9e8fceac4bfe6ef084abb8cfca480 259 SUPERFAMILY SSF55811 4 100 8.92E-17 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_05360 08a9e8fceac4bfe6ef084abb8cfca480 259 Pfam PF00293 NUDIX domain 133 245 5.1E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_05360 08a9e8fceac4bfe6ef084abb8cfca480 259 Gene3D G3DSA:3.90.79.20 2 128 9.0E-31 T 11-10-2018 AMS64_14810 d6c5de4dde96cf5f57a20d563ca44e86 75 PIRSF PIRSF006188 1 71 1.5E-29 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AMS64_14810 d6c5de4dde96cf5f57a20d563ca44e86 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 68 2.7E-21 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AMS64_14810 d6c5de4dde96cf5f57a20d563ca44e86 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 68 7.0E-33 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AMS64_14810 d6c5de4dde96cf5f57a20d563ca44e86 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 70 21.583 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AMS64_14810 d6c5de4dde96cf5f57a20d563ca44e86 75 Gene3D G3DSA:1.10.3390.10 1 75 2.7E-31 T 11-10-2018 IPR023202 YejL-like superfamily AMS64_14810 d6c5de4dde96cf5f57a20d563ca44e86 75 SUPERFAMILY SSF158651 1 72 4.58E-27 T 11-10-2018 IPR023202 YejL-like superfamily AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 Gene3D G3DSA:3.30.1370.100 484 577 1.0E-30 T 11-10-2018 AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 SMART SM01340 212 330 2.1E-58 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 SUPERFAMILY SSF55874 1 208 1.03E-54 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 1.4E-37 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 124 8.4E-13 T 11-10-2018 AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 Gene3D G3DSA:2.30.42.20 441 612 1.0E-30 T 11-10-2018 AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 SUPERFAMILY SSF118116 440 598 9.29E-31 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 SMART SM00853 442 583 1.2E-14 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 SUPERFAMILY SSF54211 191 330 3.0E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 7.0E-98 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 Pfam PF08676 MutL C terminal dimerisation domain 441 572 1.0E-23 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 Gene3D G3DSA:3.30.565.10 1 216 1.6E-70 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 Gene3D G3DSA:3.30.230.10 217 329 7.4E-39 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 624 25.293 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AMS64_19425 edcab0b50e1f8500b810c219f145aecc 624 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site AMS64_08605 9d9ca5d6b6967e41a85acdef99ca2ee8 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AMS64_08605 9d9ca5d6b6967e41a85acdef99ca2ee8 403 Gene3D G3DSA:3.40.47.10 258 401 3.4E-48 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_08605 9d9ca5d6b6967e41a85acdef99ca2ee8 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 4.2E-29 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMS64_08605 9d9ca5d6b6967e41a85acdef99ca2ee8 403 SMART SM00825 Beta-ketoacyl synthase 4 403 1.5E-12 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMS64_08605 9d9ca5d6b6967e41a85acdef99ca2ee8 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 8.0E-43 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMS64_08605 9d9ca5d6b6967e41a85acdef99ca2ee8 403 SUPERFAMILY SSF53901 1 251 3.17E-65 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_08605 9d9ca5d6b6967e41a85acdef99ca2ee8 403 SUPERFAMILY SSF53901 213 400 1.07E-60 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_08605 9d9ca5d6b6967e41a85acdef99ca2ee8 403 Gene3D G3DSA:3.40.47.10 1 252 2.7E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_19690 564cf74e06d10b12286030dd3eb9987f 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 246 265 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AMS64_19690 564cf74e06d10b12286030dd3eb9987f 361 SMART SM01329 5 357 5.5E-200 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMS64_19690 564cf74e06d10b12286030dd3eb9987f 361 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 353 1.5E-163 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AMS64_19690 564cf74e06d10b12286030dd3eb9987f 361 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 361 50.586 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AMS64_19690 564cf74e06d10b12286030dd3eb9987f 361 Gene3D G3DSA:3.40.718.10 1 361 1.1E-157 T 11-10-2018 AMS64_19690 564cf74e06d10b12286030dd3eb9987f 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 357 2.3E-133 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMS64_19690 564cf74e06d10b12286030dd3eb9987f 361 SUPERFAMILY SSF53659 2 361 1.58E-122 T 11-10-2018 AMS64_01980 1b53e4d77391211c4c814f676c767017 92 PIRSF PIRSF002144 1 92 5.8E-32 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01980 1b53e4d77391211c4c814f676c767017 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.801 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01980 1b53e4d77391211c4c814f676c767017 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.3E-46 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMS64_01980 1b53e4d77391211c4c814f676c767017 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.1E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01980 1b53e4d77391211c4c814f676c767017 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.1E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01980 1b53e4d77391211c4c814f676c767017 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.1E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01980 1b53e4d77391211c4c814f676c767017 92 Gene3D G3DSA:3.30.860.10 1 92 4.9E-44 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01980 1b53e4d77391211c4c814f676c767017 92 Pfam PF00203 Ribosomal protein S19 3 83 5.9E-37 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01980 1b53e4d77391211c4c814f676c767017 92 SUPERFAMILY SSF54570 3 84 9.16E-36 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01980 1b53e4d77391211c4c814f676c767017 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 631 1.2E-243 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 541 562 1.9E-68 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 488 513 1.9E-68 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 147 162 1.9E-68 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 197 219 1.9E-68 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 90 104 1.9E-68 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 324 341 1.9E-68 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 66 81 1.9E-68 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 463 484 1.9E-68 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 173 194 1.9E-68 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PIRSF PIRSF001336 1 633 3.1E-237 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 1.4E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 240 253 1.4E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 334 353 1.4E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 541 554 1.4E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 SUPERFAMILY SSF51419 66 346 9.49E-65 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 91 344 1.9E-49 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 278 291 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 Gene3D G3DSA:2.40.37.10 13 565 2.0E-222 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 632 40.473 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 Gene3D G3DSA:3.20.20.10 67 346 2.0E-222 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_13330 5d99b710777f8332fd3beee3f2b3954a 633 Gene3D G3DSA:1.20.58.930 363 456 2.0E-222 T 11-10-2018 AMS64_06590 eeaaa6234e8bbb73eb2bfd621d1044da 742 Gene3D G3DSA:3.55.50.30 312 394 1.3E-8 T 11-10-2018 AMS64_06590 eeaaa6234e8bbb73eb2bfd621d1044da 742 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 322 738 6.5E-162 T 11-10-2018 IPR013355 Type IV pilus secretin PilQ AMS64_06590 eeaaa6234e8bbb73eb2bfd621d1044da 742 SMART SM00965 347 395 3.2E-8 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AMS64_06590 eeaaa6234e8bbb73eb2bfd621d1044da 742 PRINTS PR00811 Bacterial general secretion pathway protein D signature 485 495 7.6E-21 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_06590 eeaaa6234e8bbb73eb2bfd621d1044da 742 PRINTS PR00811 Bacterial general secretion pathway protein D signature 576 600 7.6E-21 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_06590 eeaaa6234e8bbb73eb2bfd621d1044da 742 PRINTS PR00811 Bacterial general secretion pathway protein D signature 703 721 7.6E-21 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_06590 eeaaa6234e8bbb73eb2bfd621d1044da 742 PRINTS PR00811 Bacterial general secretion pathway protein D signature 726 740 7.6E-21 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_06590 eeaaa6234e8bbb73eb2bfd621d1044da 742 PRINTS PR00811 Bacterial general secretion pathway protein D signature 611 621 7.6E-21 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_06590 eeaaa6234e8bbb73eb2bfd621d1044da 742 Gene3D G3DSA:2.60.40.3470 190 311 2.7E-22 T 11-10-2018 AMS64_06590 eeaaa6234e8bbb73eb2bfd621d1044da 742 Gene3D G3DSA:3.30.1370.120 395 486 6.7E-25 T 11-10-2018 IPR038591 NolW-like superfamily AMS64_06590 eeaaa6234e8bbb73eb2bfd621d1044da 742 Pfam PF03958 Bacterial type II/III secretion system short domain 421 485 1.4E-10 T 11-10-2018 IPR005644 NolW-like AMS64_06590 eeaaa6234e8bbb73eb2bfd621d1044da 742 Pfam PF00263 Bacterial type II and III secretion system protein 580 738 2.6E-47 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AMS64_17740 feaeeb3723c76cdd18afbdcbd106d7d4 672 Gene3D G3DSA:3.40.390.10 39 672 1.3E-244 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMS64_17740 feaeeb3723c76cdd18afbdcbd106d7d4 672 Gene3D G3DSA:1.10.1380.10 70 460 1.3E-244 T 11-10-2018 AMS64_17740 feaeeb3723c76cdd18afbdcbd106d7d4 672 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 465 477 2.4E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMS64_17740 feaeeb3723c76cdd18afbdcbd106d7d4 672 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 483 495 2.4E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMS64_17740 feaeeb3723c76cdd18afbdcbd106d7d4 672 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 570 581 2.4E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMS64_17740 feaeeb3723c76cdd18afbdcbd106d7d4 672 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 504 520 2.4E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMS64_17740 feaeeb3723c76cdd18afbdcbd106d7d4 672 SUPERFAMILY SSF55486 31 672 6.3E-216 T 11-10-2018 AMS64_17740 feaeeb3723c76cdd18afbdcbd106d7d4 672 Pfam PF01431 Peptidase family M13 473 669 1.4E-70 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMS64_17740 feaeeb3723c76cdd18afbdcbd106d7d4 672 Pfam PF05649 Peptidase family M13 44 421 1.5E-106 T 11-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AMS64_10155 715b6b0ab92d1b2a0290356a37976552 475 Gene3D G3DSA:1.20.1280.70 362 422 2.4E-24 T 11-10-2018 AMS64_10155 715b6b0ab92d1b2a0290356a37976552 475 Pfam PF08411 Exonuclease C-terminal 214 473 7.5E-101 T 11-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 AMS64_10155 715b6b0ab92d1b2a0290356a37976552 475 Gene3D G3DSA:2.30.30.450 216 355 1.9E-56 T 11-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily AMS64_10155 715b6b0ab92d1b2a0290356a37976552 475 PIRSF PIRSF000977 5 475 5.1E-198 T 11-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 AMS64_10155 715b6b0ab92d1b2a0290356a37976552 475 Pfam PF00929 Exonuclease 15 194 3.2E-25 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMS64_10155 715b6b0ab92d1b2a0290356a37976552 475 SUPERFAMILY SSF53098 12 474 6.96E-134 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_10155 715b6b0ab92d1b2a0290356a37976552 475 Gene3D G3DSA:3.30.420.10 5 203 4.5E-72 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_02050 ce4915bb1bc01c335e890fde6c334166 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 11-10-2018 IPR018038 Ribosomal protein L30, conserved site AMS64_02050 ce4915bb1bc01c335e890fde6c334166 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 58 9.9E-26 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02050 ce4915bb1bc01c335e890fde6c334166 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 21.548 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02050 ce4915bb1bc01c335e890fde6c334166 59 SUPERFAMILY SSF55129 3 58 7.46E-22 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AMS64_02050 ce4915bb1bc01c335e890fde6c334166 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 4.6E-20 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMS64_02050 ce4915bb1bc01c335e890fde6c334166 59 Gene3D G3DSA:3.30.1390.20 1 58 2.9E-27 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AMS64_02050 ce4915bb1bc01c335e890fde6c334166 59 PIRSF PIRSF002211 1 59 5.0E-28 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 Gene3D G3DSA:3.90.226.10 1 301 3.1E-102 T 11-10-2018 AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 SUPERFAMILY SSF52096 1 300 1.22E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 313 491 8.8E-53 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 711 9.7E-6 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 588 8.4E-27 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 SUPERFAMILY SSF51735 313 492 1.69E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 SUPERFAMILY SSF48179 623 715 2.13E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 Gene3D G3DSA:3.40.50.720 302 496 2.4E-58 T 11-10-2018 AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 Gene3D G3DSA:1.10.1040.50 497 710 9.0E-68 T 11-10-2018 AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 SUPERFAMILY SSF48179 494 591 1.02E-26 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 5 715 0.0 T 11-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMS64_10000 b2656b59e9f95232fb9ae2fec5dcda73 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 203 4.0E-40 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMS64_11890 af6c28046b8d6abfe7145b9441a25818 165 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AMS64_11890 af6c28046b8d6abfe7145b9441a25818 165 SUPERFAMILY SSF50891 1 163 2.34E-56 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AMS64_11890 af6c28046b8d6abfe7145b9441a25818 165 Gene3D G3DSA:2.40.100.10 1 164 4.8E-64 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AMS64_11890 af6c28046b8d6abfe7145b9441a25818 165 PIRSF PIRSF001467 1 163 1.9E-27 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AMS64_11890 af6c28046b8d6abfe7145b9441a25818 165 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 9.9E-48 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMS64_11890 af6c28046b8d6abfe7145b9441a25818 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 4.1E-11 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMS64_11890 af6c28046b8d6abfe7145b9441a25818 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 4.1E-11 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMS64_11890 af6c28046b8d6abfe7145b9441a25818 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 4.1E-11 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMS64_16565 443dbe00a0801df780c71445226fc087 364 Gene3D G3DSA:3.40.50.2000 164 347 1.1E-77 T 11-10-2018 AMS64_16565 443dbe00a0801df780c71445226fc087 364 Pfam PF00534 Glycosyl transferases group 1 176 341 6.6E-38 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMS64_16565 443dbe00a0801df780c71445226fc087 364 Gene3D G3DSA:3.40.50.2000 22 360 1.1E-77 T 11-10-2018 AMS64_16565 443dbe00a0801df780c71445226fc087 364 Pfam PF13439 Glycosyltransferase Family 4 12 168 5.3E-20 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMS64_16565 443dbe00a0801df780c71445226fc087 364 SUPERFAMILY SSF53756 3 362 4.0E-84 T 11-10-2018 AMS64_20755 61ec9f2fea39d4d549539411847af204 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 47.795 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_20755 61ec9f2fea39d4d549539411847af204 405 SUPERFAMILY SSF53448 5 357 3.52E-70 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_20755 61ec9f2fea39d4d549539411847af204 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_20755 61ec9f2fea39d4d549539411847af204 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 377 8.7E-149 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_20755 61ec9f2fea39d4d549539411847af204 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_20755 61ec9f2fea39d4d549539411847af204 405 Gene3D G3DSA:3.90.550.10 2 286 1.9E-81 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_20755 61ec9f2fea39d4d549539411847af204 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_20755 61ec9f2fea39d4d549539411847af204 405 SUPERFAMILY SSF51161 292 403 1.8E-20 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_20755 61ec9f2fea39d4d549539411847af204 405 Pfam PF00483 Nucleotidyl transferase 6 271 1.6E-62 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMS64_20755 61ec9f2fea39d4d549539411847af204 405 Gene3D G3DSA:2.160.10.10 287 403 2.9E-37 T 11-10-2018 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 SUPERFAMILY SSF50677 204 408 2.51E-52 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 859 3.8E-293 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 SUPERFAMILY SSF47323 668 944 2.8E-77 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 Pfam PF08264 Anticodon-binding domain of tRNA 701 855 1.7E-27 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 944 21.45 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 Gene3D G3DSA:3.40.50.620 25 645 7.7E-232 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 1.1E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 1.1E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.1E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 542 555 1.1E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 1.1E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 Gene3D G3DSA:3.90.740.10 195 413 7.7E-232 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 Gene3D G3DSA:1.10.730.20 656 945 4.5E-88 T 11-10-2018 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 SUPERFAMILY SSF52374 3 663 8.45E-134 T 11-10-2018 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 Pfam PF06827 Zinc finger found in FPG and IleRS 915 941 2.3E-6 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 656 1.6E-217 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_20190 3b99791ece2b2de3c79794e42741ec1c 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_13390 d7f58f9b4b8c27d1b4c99e383d1ae3c8 218 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMS64_13390 d7f58f9b4b8c27d1b4c99e383d1ae3c8 218 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMS64_13390 d7f58f9b4b8c27d1b4c99e383d1ae3c8 218 SUPERFAMILY SSF55620 22 216 1.19E-75 T 11-10-2018 AMS64_13390 d7f58f9b4b8c27d1b4c99e383d1ae3c8 218 Pfam PF01227 GTP cyclohydrolase I 38 214 1.4E-64 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMS64_13390 d7f58f9b4b8c27d1b4c99e383d1ae3c8 218 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 34.889 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMS64_13390 d7f58f9b4b8c27d1b4c99e383d1ae3c8 218 Gene3D G3DSA:3.30.1130.10 85 217 5.2E-53 T 11-10-2018 AMS64_13390 d7f58f9b4b8c27d1b4c99e383d1ae3c8 218 Gene3D G3DSA:1.10.286.10 1 84 1.1E-34 T 11-10-2018 AMS64_13390 d7f58f9b4b8c27d1b4c99e383d1ae3c8 218 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 3.4E-81 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMS64_05170 def03760b8e15577ff228c9913922eea 365 SUPERFAMILY SSF55909 4 363 1.45E-137 T 11-10-2018 AMS64_05170 def03760b8e15577ff228c9913922eea 365 Hamap MF_01841 Agmatine deiminase [aguA]. 8 363 56.502 T 11-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AMS64_05170 def03760b8e15577ff228c9913922eea 365 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 17 362 5.3E-119 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AMS64_05170 def03760b8e15577ff228c9913922eea 365 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 8 362 3.1E-170 T 11-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AMS64_05170 def03760b8e15577ff228c9913922eea 365 Gene3D G3DSA:3.75.10.10 4 365 3.2E-136 T 11-10-2018 AMS64_19660 b0d28a4e73d92557504d2685bde2eb0b 164 Pfam PF10369 Small subunit of acetolactate synthase 84 157 2.2E-23 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMS64_19660 b0d28a4e73d92557504d2685bde2eb0b 164 Pfam PF13710 ACT domain 12 73 7.4E-16 T 11-10-2018 AMS64_19660 b0d28a4e73d92557504d2685bde2eb0b 164 SUPERFAMILY SSF55021 2 76 1.04E-23 T 11-10-2018 AMS64_19660 b0d28a4e73d92557504d2685bde2eb0b 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 1.5E-64 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMS64_19660 b0d28a4e73d92557504d2685bde2eb0b 164 Gene3D G3DSA:3.30.70.260 1 78 7.3E-36 T 11-10-2018 AMS64_19660 b0d28a4e73d92557504d2685bde2eb0b 164 SUPERFAMILY SSF55021 79 162 1.64E-24 T 11-10-2018 AMS64_19660 b0d28a4e73d92557504d2685bde2eb0b 164 Gene3D G3DSA:3.30.70.1150 80 157 1.0E-25 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AMS64_19660 b0d28a4e73d92557504d2685bde2eb0b 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 3.0E-32 T 11-10-2018 AMS64_00045 379bc710706c7eb2f35dee47a5394803 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 278 3.3E-121 T 11-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AMS64_00045 379bc710706c7eb2f35dee47a5394803 278 SUPERFAMILY SSF53474 3 278 1.74E-89 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_00045 379bc710706c7eb2f35dee47a5394803 278 Pfam PF00756 Putative esterase 25 273 2.5E-65 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMS64_00045 379bc710706c7eb2f35dee47a5394803 278 Gene3D G3DSA:3.40.50.1820 3 278 3.7E-90 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_07690 ea6e4ac671414dc8a8093ebc65656ea8 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 9.5E-70 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07690 ea6e4ac671414dc8a8093ebc65656ea8 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 9.5E-70 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07690 ea6e4ac671414dc8a8093ebc65656ea8 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 9.5E-70 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07690 ea6e4ac671414dc8a8093ebc65656ea8 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 9.5E-70 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07690 ea6e4ac671414dc8a8093ebc65656ea8 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 9.5E-70 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07690 ea6e4ac671414dc8a8093ebc65656ea8 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 9.5E-70 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07690 ea6e4ac671414dc8a8093ebc65656ea8 217 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07690 ea6e4ac671414dc8a8093ebc65656ea8 217 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07690 ea6e4ac671414dc8a8093ebc65656ea8 217 Pfam PF00813 FliP family 14 211 2.7E-68 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07690 ea6e4ac671414dc8a8093ebc65656ea8 217 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 7.6E-93 T 11-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 AMS64_13870 ea6e4ac671414dc8a8093ebc65656ea8 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 9.5E-70 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_13870 ea6e4ac671414dc8a8093ebc65656ea8 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 9.5E-70 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_13870 ea6e4ac671414dc8a8093ebc65656ea8 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 9.5E-70 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_13870 ea6e4ac671414dc8a8093ebc65656ea8 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 9.5E-70 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_13870 ea6e4ac671414dc8a8093ebc65656ea8 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 9.5E-70 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_13870 ea6e4ac671414dc8a8093ebc65656ea8 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 9.5E-70 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_13870 ea6e4ac671414dc8a8093ebc65656ea8 217 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_13870 ea6e4ac671414dc8a8093ebc65656ea8 217 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_13870 ea6e4ac671414dc8a8093ebc65656ea8 217 Pfam PF00813 FliP family 14 211 2.7E-68 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_13870 ea6e4ac671414dc8a8093ebc65656ea8 217 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 7.6E-93 T 11-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 AMS64_01345 f8c92e3bdf499d30bd133eb6c901ca99 670 Gene3D G3DSA:1.10.486.10 377 540 2.5E-127 T 11-10-2018 AMS64_01345 f8c92e3bdf499d30bd133eb6c901ca99 670 Gene3D G3DSA:1.10.10.160 108 181 1.9E-97 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AMS64_01345 f8c92e3bdf499d30bd133eb6c901ca99 670 SUPERFAMILY SSF52540 1 640 1.46E-158 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01345 f8c92e3bdf499d30bd133eb6c901ca99 670 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AMS64_01345 f8c92e3bdf499d30bd133eb6c901ca99 670 Gene3D G3DSA:3.40.50.300 274 633 2.5E-127 T 11-10-2018 AMS64_01345 f8c92e3bdf499d30bd133eb6c901ca99 670 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.6E-76 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMS64_01345 f8c92e3bdf499d30bd133eb6c901ca99 670 Gene3D G3DSA:3.40.50.300 4 266 1.9E-97 T 11-10-2018 AMS64_01345 f8c92e3bdf499d30bd133eb6c901ca99 670 Pfam PF13361 UvrD-like helicase C-terminal domain 271 614 2.1E-69 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMS64_01345 f8c92e3bdf499d30bd133eb6c901ca99 670 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.532 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AMS64_09125 f275daab8b12e03fe0be0033ff4c661d 233 Gene3D G3DSA:3.30.420.40 6 221 7.4E-78 T 11-10-2018 AMS64_09125 f275daab8b12e03fe0be0033ff4c661d 233 Pfam PF00814 Glycoprotease family 31 154 7.3E-34 T 11-10-2018 IPR000905 Gcp-like domain AMS64_09125 f275daab8b12e03fe0be0033ff4c661d 233 Gene3D G3DSA:3.30.420.40 97 190 7.4E-78 T 11-10-2018 AMS64_09125 f275daab8b12e03fe0be0033ff4c661d 233 SUPERFAMILY SSF53067 112 219 2.46E-26 T 11-10-2018 AMS64_09125 f275daab8b12e03fe0be0033ff4c661d 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 6 221 1.2E-65 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AMS64_09125 f275daab8b12e03fe0be0033ff4c661d 233 SUPERFAMILY SSF53067 5 109 7.34E-32 T 11-10-2018 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 Pfam PF01588 Putative tRNA binding domain 582 674 3.1E-24 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 Pfam PF08264 Anticodon-binding domain of tRNA 417 503 2.9E-6 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 Gene3D G3DSA:2.20.28.20 142 176 2.6E-158 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 Pfam PF09334 tRNA synthetases class I (M) 8 397 4.1E-163 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 541 677 3.1E-46 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 SUPERFAMILY SSF50249 571 676 1.3E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_09190 e2d333f50eead7920344a477f0a70051 677 SUPERFAMILY SSF57770 142 176 1.57E-12 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 41.173 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 Gene3D G3DSA:1.10.730.10 390 527 1.8E-33 T 11-10-2018 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 252 263 1.2E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.2E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.2E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 1.2E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.2E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 1.2E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 Gene3D G3DSA:3.40.50.620 8 385 2.6E-158 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_09190 e2d333f50eead7920344a477f0a70051 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 536 3.0E-198 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 SUPERFAMILY SSF52374 4 388 3.33E-101 T 11-10-2018 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 SUPERFAMILY SSF47323 390 548 7.66E-46 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_09190 e2d333f50eead7920344a477f0a70051 677 Gene3D G3DSA:2.40.50.140 566 677 3.2E-35 T 11-10-2018 AMS64_15285 a3d44eaa93e1168dcbb8ae64c472e102 375 SUPERFAMILY SSF48600 12 181 6.32E-37 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMS64_15285 a3d44eaa93e1168dcbb8ae64c472e102 375 Pfam PF01817 Chorismate mutase type II 9 87 1.4E-20 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMS64_15285 a3d44eaa93e1168dcbb8ae64c472e102 375 Gene3D G3DSA:1.10.3660.10 248 374 2.0E-48 T 11-10-2018 AMS64_15285 a3d44eaa93e1168dcbb8ae64c472e102 375 PIRSF PIRSF001499 1 374 2.8E-164 T 11-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AMS64_15285 a3d44eaa93e1168dcbb8ae64c472e102 375 Pfam PF02153 Prephenate dehydrogenase 140 344 5.8E-27 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AMS64_15285 a3d44eaa93e1168dcbb8ae64c472e102 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 4.6E-41 T 11-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AMS64_15285 a3d44eaa93e1168dcbb8ae64c472e102 375 SUPERFAMILY SSF48179 242 365 5.78E-40 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_15285 a3d44eaa93e1168dcbb8ae64c472e102 375 Gene3D G3DSA:3.40.50.720 82 246 1.8E-39 T 11-10-2018 AMS64_15285 a3d44eaa93e1168dcbb8ae64c472e102 375 SMART SM00830 9 89 2.0E-31 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMS64_15285 a3d44eaa93e1168dcbb8ae64c472e102 375 Gene3D G3DSA:1.20.59.10 1 81 2.3E-17 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMS64_16740 8691e284df4862fc2254bee90120e640 193 Gene3D G3DSA:3.30.420.130 15 110 4.3E-11 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily AMS64_16740 8691e284df4862fc2254bee90120e640 193 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 22 97 2.1E-11 T 11-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AMS64_16740 8691e284df4862fc2254bee90120e640 193 SUPERFAMILY SSF53146 19 128 7.06E-17 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily AMS64_10875 9e98db69b9a91a927f99c10d556d5fbb 232 Gene3D G3DSA:3.40.50.300 8 231 3.1E-62 T 11-10-2018 AMS64_10875 9e98db69b9a91a927f99c10d556d5fbb 232 SUPERFAMILY SSF52540 10 228 1.08E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10875 9e98db69b9a91a927f99c10d556d5fbb 232 SMART SM00382 39 227 2.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_10875 9e98db69b9a91a927f99c10d556d5fbb 232 Pfam PF00005 ABC transporter 30 178 4.7E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_10875 9e98db69b9a91a927f99c10d556d5fbb 232 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_10875 9e98db69b9a91a927f99c10d556d5fbb 232 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 10 228 7.3E-98 T 11-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 AMS64_18915 47c33d19ff3d8bb31f68a8ddf8c6c887 217 Gene3D G3DSA:2.40.30.20 1 89 7.3E-26 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_18915 47c33d19ff3d8bb31f68a8ddf8c6c887 217 PIRSF PIRSF000498 1 211 2.6E-76 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_18915 47c33d19ff3d8bb31f68a8ddf8c6c887 217 Gene3D G3DSA:2.40.30.20 102 205 7.8E-35 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_18915 47c33d19ff3d8bb31f68a8ddf8c6c887 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 195 3.4E-62 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_18915 47c33d19ff3d8bb31f68a8ddf8c6c887 217 SUPERFAMILY SSF63380 1 89 5.1E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_18915 47c33d19ff3d8bb31f68a8ddf8c6c887 217 Pfam PF00677 Lumazine binding domain 100 184 6.3E-26 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_18915 47c33d19ff3d8bb31f68a8ddf8c6c887 217 Pfam PF00677 Lumazine binding domain 3 87 1.8E-20 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_18915 47c33d19ff3d8bb31f68a8ddf8c6c887 217 SUPERFAMILY SSF63380 93 195 3.15E-33 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_21195 d50115bb9649f6872ddeae8263b5d352 298 SUPERFAMILY SSF56059 98 287 7.58E-49 T 11-10-2018 AMS64_21195 d50115bb9649f6872ddeae8263b5d352 298 Gene3D G3DSA:3.30.470.80 182 295 1.3E-42 T 11-10-2018 AMS64_21195 d50115bb9649f6872ddeae8263b5d352 298 Gene3D G3DSA:3.30.1490.20 115 181 4.3E-24 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMS64_21195 d50115bb9649f6872ddeae8263b5d352 298 Gene3D G3DSA:3.40.50.20 1 114 2.5E-38 T 11-10-2018 AMS64_21195 d50115bb9649f6872ddeae8263b5d352 298 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 284 1.1E-83 T 11-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 AMS64_21195 d50115bb9649f6872ddeae8263b5d352 298 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 51.771 T 11-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AMS64_21195 d50115bb9649f6872ddeae8263b5d352 298 Pfam PF08443 RimK-like ATP-grasp domain 98 285 2.0E-69 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AMS64_20395 01f06311295dcefefea61ee328651d55 233 SUPERFAMILY SSF51419 1 228 3.66E-77 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_20395 01f06311295dcefefea61ee328651d55 233 Pfam PF01168 Alanine racemase, N-terminal domain 11 230 5.8E-31 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_20395 01f06311295dcefefea61ee328651d55 233 Gene3D G3DSA:3.20.20.10 1 233 1.2E-83 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_20395 01f06311295dcefefea61ee328651d55 233 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 4.4E-75 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMS64_20395 01f06311295dcefefea61ee328651d55 233 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 32.065 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMS64_20395 01f06311295dcefefea61ee328651d55 233 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMS64_20395 01f06311295dcefefea61ee328651d55 233 PIRSF PIRSF004848 1 233 1.0E-75 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 Pfam PF09371 Tex-like protein N-terminal domain 9 192 1.0E-67 T 11-10-2018 IPR018974 Tex-like protein, N-terminal AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 Gene3D G3DSA:1.10.150.310 496 627 2.2E-52 T 11-10-2018 AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 SUPERFAMILY SSF47781 557 629 1.56E-20 T 11-10-2018 IPR010994 RuvA domain 2-like AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 Pfam PF12836 Helix-hairpin-helix motif 488 552 1.6E-30 T 11-10-2018 AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 SMART SM00732 322 421 6.7E-34 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 Gene3D G3DSA:2.40.50.140 628 721 1.2E-28 T 11-10-2018 AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 SUPERFAMILY SSF47781 467 555 2.89E-29 T 11-10-2018 IPR010994 RuvA domain 2-like AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 SMART SM00316 646 717 9.3E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 Gene3D G3DSA:1.10.3500.10 112 495 1.1E-154 T 11-10-2018 IPR023323 Tex-like domain superfamily AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 Gene3D G3DSA:1.10.10.650 2 109 2.9E-40 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 SUPERFAMILY SSF53098 318 466 9.1E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 SUPERFAMILY SSF158832 1 317 2.09E-119 T 11-10-2018 AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 Pfam PF16921 Tex protein YqgF-like domain 323 448 2.7E-53 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 Gene3D G3DSA:3.30.420.140 321 448 1.1E-154 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 Pfam PF00575 S1 RNA binding domain 649 717 2.7E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMS64_01930 f9de7bfeb99e09fba8a4b1390e887192 769 SUPERFAMILY SSF50249 635 720 1.94E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_04385 2d113f41b3958859c92cc8cfcfb4a6d7 450 Gene3D G3DSA:2.40.50.140 4 77 2.2E-15 T 11-10-2018 AMS64_04385 2d113f41b3958859c92cc8cfcfb4a6d7 450 Pfam PF01938 TRAM domain 4 57 1.9E-7 T 11-10-2018 IPR002792 TRAM domain AMS64_04385 2d113f41b3958859c92cc8cfcfb4a6d7 450 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 377 408 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AMS64_04385 2d113f41b3958859c92cc8cfcfb4a6d7 450 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 15 439 6.4E-130 T 11-10-2018 AMS64_04385 2d113f41b3958859c92cc8cfcfb4a6d7 450 Gene3D G3DSA:3.40.1350.30 125 278 1.6E-111 T 11-10-2018 AMS64_04385 2d113f41b3958859c92cc8cfcfb4a6d7 450 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 429 439 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site AMS64_04385 2d113f41b3958859c92cc8cfcfb4a6d7 450 SUPERFAMILY SSF53335 75 444 1.59E-78 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_04385 2d113f41b3958859c92cc8cfcfb4a6d7 450 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 269 441 5.5E-16 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AMS64_04385 2d113f41b3958859c92cc8cfcfb4a6d7 450 SUPERFAMILY SSF50249 4 58 3.37E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_04385 2d113f41b3958859c92cc8cfcfb4a6d7 450 Gene3D G3DSA:3.40.50.150 79 441 1.6E-111 T 11-10-2018 AMS64_15765 3ca8b4424c17d8576d17b11541bf8354 357 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 210 345 1.8E-20 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AMS64_15765 3ca8b4424c17d8576d17b11541bf8354 357 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 15 346 4.4E-83 T 11-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AMS64_15765 3ca8b4424c17d8576d17b11541bf8354 357 SMART SM00047 189 353 4.5E-37 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AMS64_15765 3ca8b4424c17d8576d17b11541bf8354 357 Pfam PF10135 Rod binding protein 55 105 7.7E-13 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal AMS64_15765 3ca8b4424c17d8576d17b11541bf8354 357 Gene3D G3DSA:2.10.70.40 238 290 6.6E-46 T 11-10-2018 AMS64_15765 3ca8b4424c17d8576d17b11541bf8354 357 Gene3D G3DSA:1.10.530.10 204 343 6.6E-46 T 11-10-2018 AMS64_11590 680fb2a60459ce3ada17e8bc3f599aff 425 Pfam PF13393 Histidyl-tRNA synthetase 10 312 8.8E-47 T 11-10-2018 AMS64_11590 680fb2a60459ce3ada17e8bc3f599aff 425 Gene3D G3DSA:3.40.50.800 326 422 7.8E-23 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AMS64_11590 680fb2a60459ce3ada17e8bc3f599aff 425 PIRSF PIRSF001549 2 424 4.3E-121 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AMS64_11590 680fb2a60459ce3ada17e8bc3f599aff 425 SUPERFAMILY SSF52954 328 421 2.45E-21 T 11-10-2018 AMS64_11590 680fb2a60459ce3ada17e8bc3f599aff 425 Gene3D G3DSA:3.30.930.10 2 324 4.7E-117 T 11-10-2018 AMS64_11590 680fb2a60459ce3ada17e8bc3f599aff 425 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 422 33.115 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AMS64_11590 680fb2a60459ce3ada17e8bc3f599aff 425 Pfam PF03129 Anticodon binding domain 331 422 5.5E-9 T 11-10-2018 IPR004154 Anticodon-binding AMS64_11590 680fb2a60459ce3ada17e8bc3f599aff 425 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 7.7E-155 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AMS64_11590 680fb2a60459ce3ada17e8bc3f599aff 425 SUPERFAMILY SSF55681 5 319 7.17E-101 T 11-10-2018 AMS64_17450 add562e48d3fec6d520cd0e9f16945b6 465 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 374 394 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AMS64_17450 add562e48d3fec6d520cd0e9f16945b6 465 TIGRFAM TIGR03173 pbuX: xanthine permease 40 458 3.3E-135 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 AMS64_17450 add562e48d3fec6d520cd0e9f16945b6 465 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 31 456 8.4E-122 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AMS64_17450 add562e48d3fec6d520cd0e9f16945b6 465 Pfam PF00860 Permease family 35 426 6.2E-96 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 Gene3D G3DSA:3.20.20.60 4 332 2.0E-146 T 11-10-2018 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 2.9E-186 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 2.3E-25 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 Gene3D G3DSA:2.40.33.10 71 167 2.0E-146 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 6.2E-151 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 SUPERFAMILY SSF51621 1 339 6.98E-101 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 SUPERFAMILY SSF50800 70 167 2.79E-29 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 SUPERFAMILY SSF52935 323 469 1.1E-33 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.3E-77 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.3E-77 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.3E-77 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.3E-77 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.3E-77 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.3E-77 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.3E-77 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_17140 735c172192906c4ed2d53ad56ee75189 470 Gene3D G3DSA:3.40.1380.20 336 467 8.5E-41 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_15865 346bc60290a7febb786a5ed2f8b839a8 217 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 1.6E-79 T 11-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMS64_15865 346bc60290a7febb786a5ed2f8b839a8 217 SUPERFAMILY SSF51569 1 215 8.06E-61 T 11-10-2018 AMS64_15865 346bc60290a7febb786a5ed2f8b839a8 217 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMS64_15865 346bc60290a7febb786a5ed2f8b839a8 217 Gene3D G3DSA:3.20.20.70 1 217 1.3E-74 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_15865 346bc60290a7febb786a5ed2f8b839a8 217 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 206 1.9E-37 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMS64_21945 4ed7d9fe297304eb872d2d69e9c37357 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 329 1.2E-176 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AMS64_21945 4ed7d9fe297304eb872d2d69e9c37357 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 44.77 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AMS64_21945 4ed7d9fe297304eb872d2d69e9c37357 330 PIRSF PIRSF001555 1 329 2.2E-148 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AMS64_21945 4ed7d9fe297304eb872d2d69e9c37357 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 2.5E-94 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AMS64_21945 4ed7d9fe297304eb872d2d69e9c37357 330 SUPERFAMILY SSF55681 8 329 2.22E-97 T 11-10-2018 AMS64_21945 4ed7d9fe297304eb872d2d69e9c37357 330 Gene3D G3DSA:3.30.930.10 1 330 7.0E-140 T 11-10-2018 AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 163 0.0046 T 11-10-2018 AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 Pfam PF00106 short chain dehydrogenase 6 188 3.0E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 6.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 6.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 6.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 6.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 SUPERFAMILY SSF51735 3 224 2.64E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 6.7E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 6.7E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 6.7E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_21550 b1cf4ca872f660e67d361f96e45009dc 240 Gene3D G3DSA:3.40.50.720 1 240 3.6E-71 T 11-10-2018 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 Gene3D G3DSA:3.10.20.310 177 266 2.6E-23 T 11-10-2018 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 Gene3D G3DSA:3.10.20.310 350 427 4.5E-25 T 11-10-2018 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 8 843 25.342 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 Pfam PF01103 Surface antigen 450 843 1.8E-84 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 Gene3D G3DSA:3.10.20.310 94 174 3.9E-16 T 11-10-2018 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 Pfam PF07244 Surface antigen variable number repeat 94 174 2.6E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 Pfam PF07244 Surface antigen variable number repeat 349 423 3.2E-16 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 Pfam PF07244 Surface antigen variable number repeat 178 265 1.9E-14 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 Pfam PF07244 Surface antigen variable number repeat 268 346 5.6E-7 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 Gene3D G3DSA:3.10.20.310 22 93 2.7E-18 T 11-10-2018 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 PIRSF PIRSF006076 1 843 4.3E-245 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 Gene3D G3DSA:3.10.20.310 267 348 6.2E-11 T 11-10-2018 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 26 843 1.7E-272 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMS64_18000 7b1950c66959a9b8ffc0dd9837fd9c0e 843 Gene3D G3DSA:2.40.160.50 428 843 7.9E-119 T 11-10-2018 AMS64_05815 f8048b4787e515c7efd51c32798b9892 343 Pfam PF01032 FecCD transport family 17 338 2.7E-90 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMS64_05815 f8048b4787e515c7efd51c32798b9892 343 Gene3D G3DSA:1.10.3470.10 4 343 2.0E-102 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_05815 f8048b4787e515c7efd51c32798b9892 343 SUPERFAMILY SSF81345 4 338 5.23E-81 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 260 5.4E-16 T 11-10-2018 IPR000014 PAS domain AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 Gene3D G3DSA:3.30.70.270 257 429 8.9E-56 T 11-10-2018 AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 SUPERFAMILY SSF55785 28 132 8.76E-8 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 Pfam PF08448 PAS fold 14 126 2.1E-6 T 11-10-2018 IPR013656 PAS fold-4 AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 423 3.5E-54 T 11-10-2018 IPR000160 GGDEF domain AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 SUPERFAMILY SSF55785 122 251 4.95E-18 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 Gene3D G3DSA:3.30.450.20 3 134 3.9E-15 T 11-10-2018 AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 Pfam PF00990 Diguanylate cyclase, GGDEF domain 264 421 7.1E-48 T 11-10-2018 IPR000160 GGDEF domain AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 SMART SM00091 137 201 1.4E-4 T 11-10-2018 IPR000014 PAS domain AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 SMART SM00091 12 78 190.0 T 11-10-2018 IPR000014 PAS domain AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 SUPERFAMILY SSF55073 269 424 2.59E-48 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 Gene3D G3DSA:3.30.450.20 135 254 3.3E-25 T 11-10-2018 AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 SMART SM00267 253 426 1.4E-62 T 11-10-2018 IPR000160 GGDEF domain AMS64_09925 cf28a2d1da1d6b02b2378cc364a14f3b 431 Pfam PF13188 PAS domain 137 190 1.8E-7 T 11-10-2018 IPR000014 PAS domain AMS64_06170 881a109ea078ae41f314a172800c9fe0 225 SUPERFAMILY SSF55681 9 216 3.65E-68 T 11-10-2018 AMS64_06170 881a109ea078ae41f314a172800c9fe0 225 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 76 91 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMS64_06170 881a109ea078ae41f314a172800c9fe0 225 Hamap MF_00013 Octanoyltransferase [lipB]. 10 216 37.086 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMS64_06170 881a109ea078ae41f314a172800c9fe0 225 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 80 133 1.0E-16 T 11-10-2018 AMS64_06170 881a109ea078ae41f314a172800c9fe0 225 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 32 212 8.7E-64 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMS64_06170 881a109ea078ae41f314a172800c9fe0 225 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 169 2.5E-7 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMS64_06170 881a109ea078ae41f314a172800c9fe0 225 Gene3D G3DSA:3.30.930.10 6 213 3.6E-61 T 11-10-2018 AMS64_06170 881a109ea078ae41f314a172800c9fe0 225 PIRSF PIRSF016262 7 225 1.3E-59 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMS64_22435 24c33ae1eba1e473daeb0184735ff88b 498 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 482 8.8E-206 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 AMS64_22435 24c33ae1eba1e473daeb0184735ff88b 498 Gene3D G3DSA:3.40.309.10 250 451 8.8E-150 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMS64_22435 24c33ae1eba1e473daeb0184735ff88b 498 Pfam PF00171 Aldehyde dehydrogenase family 18 478 2.3E-139 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMS64_22435 24c33ae1eba1e473daeb0184735ff88b 498 SUPERFAMILY SSF53720 2 484 9.95E-147 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMS64_22435 24c33ae1eba1e473daeb0184735ff88b 498 Gene3D G3DSA:3.40.605.10 25 459 8.8E-150 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMS64_22435 24c33ae1eba1e473daeb0184735ff88b 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMS64_16140 60cf5973609cf1e14508bef87f1eb2ae 411 SUPERFAMILY SSF109604 157 326 7.54E-33 T 11-10-2018 AMS64_16140 60cf5973609cf1e14508bef87f1eb2ae 411 SMART SM00471 160 296 1.0E-6 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_16140 60cf5973609cf1e14508bef87f1eb2ae 411 TIGRFAM TIGR00277 HDIG: HDIG domain 164 255 1.0E-8 T 11-10-2018 IPR006675 HDIG domain AMS64_16140 60cf5973609cf1e14508bef87f1eb2ae 411 Pfam PF13487 HD domain 215 278 1.2E-17 T 11-10-2018 AMS64_16140 60cf5973609cf1e14508bef87f1eb2ae 411 Gene3D G3DSA:1.10.3210.10 32 328 1.2E-49 T 11-10-2018 AMS64_16140 60cf5973609cf1e14508bef87f1eb2ae 411 Pfam PF11871 Domain of unknown function (DUF3391) 5 126 1.0E-16 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 AMS64_09950 f0096619ec78ccd9e37a9517d1ecda1e 508 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 489 2.4E-50 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMS64_09950 f0096619ec78ccd9e37a9517d1ecda1e 508 Pfam PF05681 Fumarate hydratase (Fumerase) 11 284 3.4E-99 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AMS64_09950 f0096619ec78ccd9e37a9517d1ecda1e 508 Pfam PF05683 Fumarase C-terminus 288 490 1.0E-83 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMS64_09950 f0096619ec78ccd9e37a9517d1ecda1e 508 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 282 2.6E-64 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AMS64_09950 f0096619ec78ccd9e37a9517d1ecda1e 508 Gene3D G3DSA:3.20.130.10 312 490 1.1E-61 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AMS64_09950 f0096619ec78ccd9e37a9517d1ecda1e 508 SUPERFAMILY SSF117457 315 489 8.11E-64 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AMS64_09950 f0096619ec78ccd9e37a9517d1ecda1e 508 PIRSF PIRSF001394 1 506 8.3E-218 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AMS64_14335 8c9f6baa2f51d2cd32b4b0b9cf8e523d 241 PIRSF PIRSF005426 1 241 3.5E-89 T 11-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 AMS64_14335 8c9f6baa2f51d2cd32b4b0b9cf8e523d 241 Pfam PF00881 Nitroreductase family 8 159 1.6E-18 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMS64_14335 8c9f6baa2f51d2cd32b4b0b9cf8e523d 241 SUPERFAMILY SSF55469 1 241 4.71E-75 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMS64_14335 8c9f6baa2f51d2cd32b4b0b9cf8e523d 241 Gene3D G3DSA:3.40.109.10 1 240 2.4E-75 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMS64_05460 ae0f83ba45fafa7550ae2a02d6d99381 200 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 78 1.2E-28 T 11-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AMS64_05460 ae0f83ba45fafa7550ae2a02d6d99381 200 PIRSF PIRSF016938 1 198 1.8E-37 T 11-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 AMS64_05460 ae0f83ba45fafa7550ae2a02d6d99381 200 Gene3D G3DSA:1.10.10.880 2 67 2.0E-26 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 AMS64_05460 ae0f83ba45fafa7550ae2a02d6d99381 200 SUPERFAMILY SSF89069 4 67 1.57E-20 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 AMS64_05460 ae0f83ba45fafa7550ae2a02d6d99381 200 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 135 192 5.9E-22 T 11-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 Gene3D G3DSA:3.30.420.40 3 315 1.5E-130 T 11-10-2018 AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 SUPERFAMILY SSF53067 101 309 1.32E-43 T 11-10-2018 AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 1.1E-124 T 11-10-2018 IPR017861 Kae1/TsaD family AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 SUPERFAMILY SSF53067 3 122 1.42E-30 T 11-10-2018 AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 Pfam PF00814 Glycoprotease family 24 307 5.4E-100 T 11-10-2018 IPR000905 Gcp-like domain AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.6E-135 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 62.905 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.4E-51 T 11-10-2018 IPR017861 Kae1/TsaD family AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.4E-51 T 11-10-2018 IPR017861 Kae1/TsaD family AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.4E-51 T 11-10-2018 IPR017861 Kae1/TsaD family AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.4E-51 T 11-10-2018 IPR017861 Kae1/TsaD family AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.4E-51 T 11-10-2018 IPR017861 Kae1/TsaD family AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.4E-51 T 11-10-2018 IPR017861 Kae1/TsaD family AMS64_19810 7f6caa8bdb68164195dec7d59aaf773c 337 Gene3D G3DSA:3.30.420.40 129 293 1.5E-130 T 11-10-2018 AMS64_13085 a8cf1ac1c74f7e189e268e7cc569caae 505 SUPERFAMILY SSF52172 22 179 7.26E-12 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_13085 a8cf1ac1c74f7e189e268e7cc569caae 505 Pfam PF11849 Domain of unknown function (DUF3369) 146 301 5.9E-33 T 11-10-2018 IPR021800 Domain of unknown function DUF3369 AMS64_13085 a8cf1ac1c74f7e189e268e7cc569caae 505 SMART SM00471 320 457 4.2E-9 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_13085 a8cf1ac1c74f7e189e268e7cc569caae 505 SUPERFAMILY SSF109604 316 487 5.65E-39 T 11-10-2018 AMS64_13085 a8cf1ac1c74f7e189e268e7cc569caae 505 Gene3D G3DSA:3.40.50.2300 16 167 1.2E-13 T 11-10-2018 AMS64_13085 a8cf1ac1c74f7e189e268e7cc569caae 505 Pfam PF00072 Response regulator receiver domain 25 134 8.0E-5 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_13085 a8cf1ac1c74f7e189e268e7cc569caae 505 Gene3D G3DSA:1.10.3210.10 300 501 7.2E-71 T 11-10-2018 AMS64_13085 a8cf1ac1c74f7e189e268e7cc569caae 505 Pfam PF01966 HD domain 327 447 5.0E-20 T 11-10-2018 IPR006674 HD domain AMS64_22620 f098576ea54e145411d61b94813fb4fa 87 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 86 5.0E-31 T 11-10-2018 IPR009383 Protein of unknown function DUF1040 AMS64_22620 f098576ea54e145411d61b94813fb4fa 87 Gene3D G3DSA:1.10.1580.20 1 87 1.9E-41 T 11-10-2018 IPR038134 YihD-like superfamily AMS64_22620 f098576ea54e145411d61b94813fb4fa 87 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 2.4E-44 T 11-10-2018 IPR009383 Protein of unknown function DUF1040 AMS64_08155 de277ee5b339bbd2b5857dcf127fdbee 824 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 662 674 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AMS64_08155 de277ee5b339bbd2b5857dcf127fdbee 824 Pfam PF00343 Carbohydrate phosphorylase 104 817 0.0 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AMS64_08155 de277ee5b339bbd2b5857dcf127fdbee 824 PIRSF PIRSF000460 1 824 2.4E-221 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AMS64_08155 de277ee5b339bbd2b5857dcf127fdbee 824 SUPERFAMILY SSF53756 11 822 0.0 T 11-10-2018 AMS64_08155 de277ee5b339bbd2b5857dcf127fdbee 824 Gene3D G3DSA:3.40.50.2000 2 478 1.1E-197 T 11-10-2018 AMS64_08155 de277ee5b339bbd2b5857dcf127fdbee 824 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 818 0.0 T 11-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AMS64_08155 de277ee5b339bbd2b5857dcf127fdbee 824 Gene3D G3DSA:3.40.50.2000 479 803 6.2E-136 T 11-10-2018 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 Gene3D G3DSA:2.60.40.10 626 734 1.2E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 Pfam PF16353 Domain of unknown function(DUF4981) 640 728 3.2E-14 T 11-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 SUPERFAMILY SSF49785 9 221 9.21E-63 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 SUPERFAMILY SSF49303 224 334 1.67E-24 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 Gene3D G3DSA:3.20.20.80 335 625 7.7E-123 T 11-10-2018 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 Pfam PF02929 Beta galactosidase small chain 754 1018 1.2E-60 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 Gene3D G3DSA:2.60.40.10 223 334 2.8E-27 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 Pfam PF00703 Glycosyl hydrolases family 2 224 334 6.3E-14 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 Hamap MF_01687 Beta-galactosidase [lacZ]. 1 1019 16.733 T 11-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 SUPERFAMILY SSF74650 736 1018 1.13E-84 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 49 221 1.5E-60 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 336 629 2.5E-105 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 386 411 - T 11-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 PRINTS PR00132 Glycosyl hydrolase family 2 signature 149 164 2.3E-34 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 PRINTS PR00132 Glycosyl hydrolase family 2 signature 448 463 2.3E-34 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 PRINTS PR00132 Glycosyl hydrolase family 2 signature 345 359 2.3E-34 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 PRINTS PR00132 Glycosyl hydrolase family 2 signature 376 394 2.3E-34 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 PRINTS PR00132 Glycosyl hydrolase family 2 signature 532 547 2.3E-34 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 SUPERFAMILY SSF51445 336 625 1.25E-98 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 Gene3D G3DSA:2.70.98.10 735 1018 6.3E-81 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 SMART SM01038 750 1019 3.4E-107 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 Gene3D G3DSA:2.60.120.260 2 221 4.2E-73 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AMS64_01600 87263588ca7d7612d1c9ce75dd9264a0 1019 SUPERFAMILY SSF49303 622 731 4.17E-24 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMS64_11595 b9c5f80055eb27e83727e55975e42471 371 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 10 350 1.1E-127 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMS64_11595 b9c5f80055eb27e83727e55975e42471 371 Gene3D G3DSA:3.30.413.10 263 360 7.2E-25 T 11-10-2018 AMS64_11595 b9c5f80055eb27e83727e55975e42471 371 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 8 358 34.787 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMS64_11595 b9c5f80055eb27e83727e55975e42471 371 SUPERFAMILY SSF56014 266 354 1.33E-12 T 11-10-2018 AMS64_11595 b9c5f80055eb27e83727e55975e42471 371 PIRSF PIRSF004640 2 363 5.0E-146 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMS64_11595 b9c5f80055eb27e83727e55975e42471 371 SUPERFAMILY SSF51604 23 140 3.88E-10 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMS64_11595 b9c5f80055eb27e83727e55975e42471 371 Gene3D G3DSA:3.20.20.20 1 262 1.8E-104 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_11595 b9c5f80055eb27e83727e55975e42471 371 Pfam PF04551 GcpE protein 14 354 2.6E-133 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMS64_17475 8074331e4bd8dbb6f5096336b5be6a6d 157 Pfam PF08534 Redoxin 4 154 1.0E-32 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMS64_17475 8074331e4bd8dbb6f5096336b5be6a6d 157 Gene3D G3DSA:3.40.30.10 1 157 1.2E-53 T 11-10-2018 AMS64_17475 8074331e4bd8dbb6f5096336b5be6a6d 157 SUPERFAMILY SSF52833 1 156 1.29E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_06610 3b6ee64a879a8a8e23e0c8dfcebbb40b 290 PIRSF PIRSF000398 1 272 1.7E-66 T 11-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AMS64_06610 3b6ee64a879a8a8e23e0c8dfcebbb40b 290 SUPERFAMILY SSF53335 5 268 9.08E-77 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_06610 3b6ee64a879a8a8e23e0c8dfcebbb40b 290 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 1.4E-93 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMS64_06610 3b6ee64a879a8a8e23e0c8dfcebbb40b 290 Gene3D G3DSA:3.40.50.150 7 239 3.7E-84 T 11-10-2018 AMS64_06610 3b6ee64a879a8a8e23e0c8dfcebbb40b 290 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMS64_06610 3b6ee64a879a8a8e23e0c8dfcebbb40b 290 Gene3D G3DSA:1.10.1020.10 57 156 3.7E-84 T 11-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AMS64_06610 3b6ee64a879a8a8e23e0c8dfcebbb40b 290 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 244 4.5E-67 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMS64_06610 3b6ee64a879a8a8e23e0c8dfcebbb40b 290 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 9.7E-18 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMS64_06610 3b6ee64a879a8a8e23e0c8dfcebbb40b 290 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 9.7E-18 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMS64_06610 3b6ee64a879a8a8e23e0c8dfcebbb40b 290 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 9.7E-18 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMS64_06610 3b6ee64a879a8a8e23e0c8dfcebbb40b 290 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 9.7E-18 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMS64_18035 da47fcc36b815dac1c32236522c564be 293 Gene3D G3DSA:1.10.286.20 194 233 7.2E-23 T 11-10-2018 AMS64_18035 da47fcc36b815dac1c32236522c564be 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 287 81.446 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMS64_18035 da47fcc36b815dac1c32236522c564be 293 SUPERFAMILY SSF46934 4 55 9.59E-18 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 AMS64_18035 da47fcc36b815dac1c32236522c564be 293 Pfam PF00889 Elongation factor TS 71 270 1.8E-68 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 AMS64_18035 da47fcc36b815dac1c32236522c564be 293 Gene3D G3DSA:1.10.8.10 1 56 1.2E-25 T 11-10-2018 AMS64_18035 da47fcc36b815dac1c32236522c564be 293 SUPERFAMILY SSF54713 56 146 4.14E-20 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMS64_18035 da47fcc36b815dac1c32236522c564be 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 287 7.4E-113 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMS64_18035 da47fcc36b815dac1c32236522c564be 293 SUPERFAMILY SSF54713 150 287 3.66E-53 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMS64_18035 da47fcc36b815dac1c32236522c564be 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMS64_18035 da47fcc36b815dac1c32236522c564be 293 Gene3D G3DSA:3.30.479.20 57 148 3.3E-25 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMS64_07145 35560c3500778e7afb27f4605a7e07e0 285 PIRSF PIRSF015626 2 270 1.3E-89 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMS64_07145 35560c3500778e7afb27f4605a7e07e0 285 Gene3D G3DSA:3.10.20.10 35 117 9.5E-11 T 11-10-2018 AMS64_07145 35560c3500778e7afb27f4605a7e07e0 285 Gene3D G3DSA:3.40.140.10 122 271 2.7E-41 T 11-10-2018 AMS64_07145 35560c3500778e7afb27f4605a7e07e0 285 SUPERFAMILY SSF53927 15 265 2.02E-71 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMS64_07145 35560c3500778e7afb27f4605a7e07e0 285 Pfam PF02634 FdhD/NarQ family 34 265 2.2E-74 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMS64_07145 35560c3500778e7afb27f4605a7e07e0 285 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 9 266 26.925 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMS64_09140 6ea7671e9bb7f7011bb75e17e48871b8 563 Gene3D G3DSA:3.30.300.310 463 562 3.6E-32 T 11-10-2018 AMS64_09140 6ea7671e9bb7f7011bb75e17e48871b8 563 Gene3D G3DSA:3.40.50.12780 18 462 2.7E-114 T 11-10-2018 AMS64_09140 6ea7671e9bb7f7011bb75e17e48871b8 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 216 227 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMS64_09140 6ea7671e9bb7f7011bb75e17e48871b8 563 SUPERFAMILY SSF56801 22 559 1.57E-148 T 11-10-2018 AMS64_09140 6ea7671e9bb7f7011bb75e17e48871b8 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 475 549 7.7E-20 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMS64_09140 6ea7671e9bb7f7011bb75e17e48871b8 563 Pfam PF00501 AMP-binding enzyme 34 466 7.2E-106 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMS64_16170 30b65d7239a7533660b08e2a82d0197b 586 SUPERFAMILY SSF52540 49 358 8.47E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_16170 30b65d7239a7533660b08e2a82d0197b 586 SUPERFAMILY SSF57829 426 466 2.01E-7 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMS64_16170 30b65d7239a7533660b08e2a82d0197b 586 Gene3D G3DSA:3.40.50.300 222 368 2.4E-33 T 11-10-2018 AMS64_16170 30b65d7239a7533660b08e2a82d0197b 586 SMART SM00487 1 191 2.9E-17 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_16170 30b65d7239a7533660b08e2a82d0197b 586 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 4.3E-24 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMS64_16170 30b65d7239a7533660b08e2a82d0197b 586 Pfam PF00271 Helicase conserved C-terminal domain 240 344 4.0E-14 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_16170 30b65d7239a7533660b08e2a82d0197b 586 SMART SM00490 265 346 6.1E-13 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_16170 30b65d7239a7533660b08e2a82d0197b 586 Gene3D G3DSA:3.40.50.300 1 165 2.5E-30 T 11-10-2018 AMS64_04890 383c70b5905c57757cb2657689e005b8 176 Gene3D G3DSA:3.40.50.2020 1 176 6.0E-64 T 11-10-2018 AMS64_04890 383c70b5905c57757cb2657689e005b8 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 3.4E-70 T 11-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 AMS64_04890 383c70b5905c57757cb2657689e005b8 176 Pfam PF00156 Phosphoribosyl transferase domain 13 159 6.4E-21 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMS64_04890 383c70b5905c57757cb2657689e005b8 176 SUPERFAMILY SSF53271 3 175 3.15E-52 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMS64_19475 eb9ee2471b10d0e23bb1ec7ba1be0e65 266 Pfam PF03180 NLPA lipoprotein 30 266 1.4E-97 T 11-10-2018 IPR004872 Lipoprotein NlpA family AMS64_19475 eb9ee2471b10d0e23bb1ec7ba1be0e65 266 Gene3D G3DSA:3.40.190.10 112 216 6.6E-95 T 11-10-2018 AMS64_19475 eb9ee2471b10d0e23bb1ec7ba1be0e65 266 SUPERFAMILY SSF53850 30 266 1.63E-81 T 11-10-2018 AMS64_19475 eb9ee2471b10d0e23bb1ec7ba1be0e65 266 Gene3D G3DSA:3.40.190.10 31 259 6.6E-95 T 11-10-2018 AMS64_19475 eb9ee2471b10d0e23bb1ec7ba1be0e65 266 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 12 266 1.3E-119 T 11-10-2018 IPR004872 Lipoprotein NlpA family AMS64_19475 eb9ee2471b10d0e23bb1ec7ba1be0e65 266 PIRSF PIRSF002854 1 266 1.1E-98 T 11-10-2018 IPR004872 Lipoprotein NlpA family AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 Gene3D G3DSA:2.20.28.60 1 50 5.5E-26 T 11-10-2018 AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 Gene3D G3DSA:1.10.230.10 268 376 3.8E-147 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 SUPERFAMILY SSF48256 6 428 6.41E-168 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 PRINTS PR00143 Citrate synthase signature 165 178 2.0E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 PRINTS PR00143 Citrate synthase signature 241 269 2.0E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 PRINTS PR00143 Citrate synthase signature 359 375 2.0E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 PRINTS PR00143 Citrate synthase signature 379 393 2.0E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 PRINTS PR00143 Citrate synthase signature 296 316 2.0E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 PRINTS PR00143 Citrate synthase signature 219 234 2.0E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 421 1.7E-232 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 Gene3D G3DSA:1.10.580.10 57 411 3.8E-147 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 7.6E-133 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMS64_08240 81bf87ea9f0af7e55b0d25fb5228a614 428 PIRSF PIRSF001369 38 428 1.1E-168 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type AMS64_19575 88f988396b29fa22ced0bfc6e93a1628 726 Pfam PF13500 AAA domain 9 240 3.0E-43 T 11-10-2018 AMS64_19575 88f988396b29fa22ced0bfc6e93a1628 726 SUPERFAMILY SSF52540 9 249 1.1E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19575 88f988396b29fa22ced0bfc6e93a1628 726 PIRSF PIRSF006107 7 724 0.0 T 11-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMS64_19575 88f988396b29fa22ced0bfc6e93a1628 726 Pfam PF07085 DRTGG domain 243 354 1.9E-30 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMS64_19575 88f988396b29fa22ced0bfc6e93a1628 726 Gene3D G3DSA:3.40.50.300 6 205 3.1E-14 T 11-10-2018 AMS64_19575 88f988396b29fa22ced0bfc6e93a1628 726 Gene3D G3DSA:3.40.1390.20 233 375 2.7E-20 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AMS64_19575 88f988396b29fa22ced0bfc6e93a1628 726 Pfam PF01515 Phosphate acetyl/butaryl transferase 401 715 5.0E-127 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMS64_19575 88f988396b29fa22ced0bfc6e93a1628 726 SUPERFAMILY SSF53659 402 720 5.76E-96 T 11-10-2018 AMS64_19575 88f988396b29fa22ced0bfc6e93a1628 726 Gene3D G3DSA:3.40.50.10950 408 719 1.3E-135 T 11-10-2018 AMS64_19575 88f988396b29fa22ced0bfc6e93a1628 726 Gene3D G3DSA:3.40.50.10750 539 692 1.3E-135 T 11-10-2018 AMS64_19575 88f988396b29fa22ced0bfc6e93a1628 726 SUPERFAMILY SSF75138 239 360 1.44E-26 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AMS64_19575 88f988396b29fa22ced0bfc6e93a1628 726 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 416 715 6.6E-135 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMS64_06700 712ac72bbbfe6459981f50576428571a 306 Gene3D G3DSA:3.40.50.1820 2 306 1.9E-83 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_06700 712ac72bbbfe6459981f50576428571a 306 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 150 162 - T 11-10-2018 IPR033140 Lipase, GDXG, putative serine active site AMS64_06700 712ac72bbbfe6459981f50576428571a 306 Pfam PF07859 alpha/beta hydrolase fold 78 282 3.0E-66 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMS64_06700 712ac72bbbfe6459981f50576428571a 306 SUPERFAMILY SSF53474 59 305 7.44E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 Gene3D G3DSA:3.20.20.70 1 292 1.2E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 5.9E-103 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 7.4E-108 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 SMART SM01130 1 290 2.7E-136 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 63.197 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.9E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.9E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.9E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.9E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 PIRSF PIRSF001365 1 294 1.5E-89 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AMS64_19545 bf3c9c78ebcc0904efc0ed50334f68a7 295 SUPERFAMILY SSF51569 1 290 9.21E-98 T 11-10-2018 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 407 420 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 Pfam PF00158 Sigma-54 interaction domain 383 550 8.0E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 469 484 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 SMART SM00065 42 180 0.77 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 SMART SM00065 208 359 3.0E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 Gene3D G3DSA:3.40.50.300 370 553 3.3E-65 T 11-10-2018 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 Gene3D G3DSA:3.30.450.40 194 360 1.5E-12 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 Gene3D G3DSA:1.10.8.60 554 620 8.4E-25 T 11-10-2018 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 SUPERFAMILY SSF46689 636 697 2.78E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 SUPERFAMILY SSF55781 23 174 3.27E-7 T 11-10-2018 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 Gene3D G3DSA:3.30.450.40 20 184 4.0E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 Gene3D G3DSA:1.10.10.60 655 697 1.2E-9 T 11-10-2018 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 SUPERFAMILY SSF55781 194 357 6.54E-13 T 11-10-2018 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 SMART SM00382 403 547 2.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 Pfam PF13185 GAF domain 289 349 2.0E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 Pfam PF02954 Bacterial regulatory protein, Fis family 656 695 1.1E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_10210 45a989b0dd96fe43bae0e5411edfcc0b 710 SUPERFAMILY SSF52540 382 619 3.84E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_04065 e3f418a2193a573f750ca5f53b7e6ec7 274 Gene3D G3DSA:1.10.10.10 1 88 1.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_04065 e3f418a2193a573f750ca5f53b7e6ec7 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.6E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04065 e3f418a2193a573f750ca5f53b7e6ec7 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.6E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04065 e3f418a2193a573f750ca5f53b7e6ec7 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.6E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04065 e3f418a2193a573f750ca5f53b7e6ec7 274 Pfam PF03466 LysR substrate binding domain 144 268 7.5E-23 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_04065 e3f418a2193a573f750ca5f53b7e6ec7 274 SUPERFAMILY SSF46785 1 85 1.49E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_04065 e3f418a2193a573f750ca5f53b7e6ec7 274 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 5.5E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04065 e3f418a2193a573f750ca5f53b7e6ec7 274 Gene3D G3DSA:3.40.190.290 128 271 1.6E-20 T 11-10-2018 AMS64_04065 e3f418a2193a573f750ca5f53b7e6ec7 274 SUPERFAMILY SSF53850 139 269 3.62E-22 T 11-10-2018 AMS64_09840 6e32e465147c46984170cfc7f3450fbb 193 SUPERFAMILY SSF52972 3 186 1.57E-57 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMS64_09840 6e32e465147c46984170cfc7f3450fbb 193 Pfam PF02545 Maf-like protein 5 187 6.6E-46 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMS64_09840 6e32e465147c46984170cfc7f3450fbb 193 Hamap MF_00528 Septum formation protein Maf [maf]. 4 192 29.229 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMS64_09840 6e32e465147c46984170cfc7f3450fbb 193 Gene3D G3DSA:3.90.950.10 3 192 1.2E-61 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMS64_09840 6e32e465147c46984170cfc7f3450fbb 193 PIRSF PIRSF006305 1 192 4.7E-46 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMS64_09840 6e32e465147c46984170cfc7f3450fbb 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 185 7.3E-55 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMS64_20355 1480ab35c9bca1fff11c86a37a089294 336 Pfam PF13343 Bacterial extracellular solute-binding protein 72 299 1.8E-22 T 11-10-2018 AMS64_20355 1480ab35c9bca1fff11c86a37a089294 336 SUPERFAMILY SSF53850 24 331 1.65E-77 T 11-10-2018 AMS64_20355 1480ab35c9bca1fff11c86a37a089294 336 Gene3D G3DSA:3.40.190.10 25 296 2.6E-127 T 11-10-2018 AMS64_20355 1480ab35c9bca1fff11c86a37a089294 336 Gene3D G3DSA:3.40.190.10 120 326 2.6E-127 T 11-10-2018 AMS64_20355 1480ab35c9bca1fff11c86a37a089294 336 PIRSF PIRSF002825 1 336 8.5E-96 T 11-10-2018 IPR026045 Ferric binding protein AMS64_10260 b4c8f3b561d2762540a04b3ba676bef2 572 Gene3D G3DSA:1.10.645.20 184 540 1.5E-111 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10260 b4c8f3b561d2762540a04b3ba676bef2 572 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 461 540 6.8E-13 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10260 b4c8f3b561d2762540a04b3ba676bef2 572 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 299 464 1.3E-35 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10260 b4c8f3b561d2762540a04b3ba676bef2 572 Gene3D G3DSA:3.30.460.80 13 137 1.4E-11 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10260 b4c8f3b561d2762540a04b3ba676bef2 572 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 39 155 1.0E-23 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10260 b4c8f3b561d2762540a04b3ba676bef2 572 SUPERFAMILY SSF143243 12 197 4.71E-43 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10260 b4c8f3b561d2762540a04b3ba676bef2 572 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 90 154 1.0E-25 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10260 b4c8f3b561d2762540a04b3ba676bef2 572 SUPERFAMILY SSF56762 196 540 1.23E-107 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10260 b4c8f3b561d2762540a04b3ba676bef2 572 Pfam PF00374 Nickel-dependent hydrogenase 221 289 1.8E-13 T 11-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 AMS64_10260 b4c8f3b561d2762540a04b3ba676bef2 572 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 219 230 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14475 4efd9a42070a504446a13140ad9cd7cd 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 582 597 2.6E-35 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMS64_14475 4efd9a42070a504446a13140ad9cd7cd 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 524 544 2.6E-35 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMS64_14475 4efd9a42070a504446a13140ad9cd7cd 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 600 622 2.6E-35 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMS64_14475 4efd9a42070a504446a13140ad9cd7cd 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 439 457 2.6E-35 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMS64_14475 4efd9a42070a504446a13140ad9cd7cd 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 465 489 2.6E-35 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMS64_14475 4efd9a42070a504446a13140ad9cd7cd 668 SUPERFAMILY SSF53474 410 649 1.03E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_14475 4efd9a42070a504446a13140ad9cd7cd 668 SUPERFAMILY SSF50993 35 396 3.66E-41 T 11-10-2018 AMS64_14475 4efd9a42070a504446a13140ad9cd7cd 668 Gene3D G3DSA:3.40.50.1820 41 659 8.8E-145 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_14475 4efd9a42070a504446a13140ad9cd7cd 668 Pfam PF00326 Prolyl oligopeptidase family 457 657 2.4E-54 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMS64_14475 4efd9a42070a504446a13140ad9cd7cd 668 Gene3D G3DSA:2.130.10.120 92 401 8.8E-145 T 11-10-2018 AMS64_14475 4efd9a42070a504446a13140ad9cd7cd 668 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 132 384 6.1E-17 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMS64_14475 4efd9a42070a504446a13140ad9cd7cd 668 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 37 87 4.1E-6 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMS64_03980 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.14 T 11-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 AMS64_03980 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 Gene3D G3DSA:3.40.50.620 318 474 1.9E-38 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_03980 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMS64_03980 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 SUPERFAMILY SSF53613 11 309 7.64E-58 T 11-10-2018 IPR029056 Ribokinase-like AMS64_03980 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 2.9E-17 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMS64_03980 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 6.4E-125 T 11-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 AMS64_03980 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 9.9E-62 T 11-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 AMS64_03980 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 Gene3D G3DSA:3.40.1190.20 2 310 4.8E-110 T 11-10-2018 IPR029056 Ribokinase-like AMS64_03980 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 SUPERFAMILY SSF52374 340 471 1.72E-22 T 11-10-2018 AMS64_03980 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 Pfam PF00294 pfkB family carbohydrate kinase 11 305 4.3E-46 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AMS64_03980 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 Pfam PF01467 Cytidylyltransferase-like 345 442 3.8E-14 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 433 450 1.1E-36 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 500 518 1.1E-36 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 327 344 1.1E-36 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 750 767 1.1E-36 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 732 748 1.1E-36 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 294 314 1.1E-36 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 356 377 1.1E-36 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 527 540 1.1E-36 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 809 883 2.7E-28 T 11-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 SUPERFAMILY SSF51445 333 772 3.61E-134 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 Gene3D G3DSA:3.20.20.80 331 821 6.1E-153 T 11-10-2018 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 SUPERFAMILY SSF81296 784 885 1.15E-36 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 SMART SM01081 36 198 8.6E-96 T 11-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 333 768 4.9E-112 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 Gene3D G3DSA:2.60.40.10 823 886 1.4E-23 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 217 330 3.9E-12 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 Pfam PF03173 Putative carbohydrate binding domain 37 196 3.0E-62 T 11-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 Gene3D G3DSA:3.30.379.10 210 330 3.5E-17 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 SUPERFAMILY SSF49384 28 200 7.11E-63 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 SUPERFAMILY SSF55545 205 332 5.89E-21 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMS64_16110 e9b0005563db0c4c5e7b1aee90a70e05 887 Gene3D G3DSA:2.60.40.290 27 168 2.8E-51 T 11-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMS64_08220 c444b672dc1aa234e1d589d504f91dc9 195 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 10 138 6.0E-9 T 11-10-2018 AMS64_08220 c444b672dc1aa234e1d589d504f91dc9 195 Gene3D G3DSA:2.40.320.10 1 186 1.3E-45 T 11-10-2018 AMS64_08220 c444b672dc1aa234e1d589d504f91dc9 195 Pfam PF01928 CYTH domain 11 174 4.8E-24 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AMS64_08220 c444b672dc1aa234e1d589d504f91dc9 195 SMART SM01118 9 180 2.3E-21 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AMS64_08220 c444b672dc1aa234e1d589d504f91dc9 195 SUPERFAMILY SSF55154 7 177 7.85E-37 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 AMS64_01835 c40985f5a2aad7401f315d245bb15bc5 689 Gene3D G3DSA:3.40.50.300 454 626 4.0E-51 T 11-10-2018 AMS64_01835 c40985f5a2aad7401f315d245bb15bc5 689 SMART SM00487 262 456 6.9E-29 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_01835 c40985f5a2aad7401f315d245bb15bc5 689 Pfam PF17191 RecG wedge domain 11 168 1.5E-19 T 11-10-2018 IPR033454 RecG, wedge domain AMS64_01835 c40985f5a2aad7401f315d245bb15bc5 689 SUPERFAMILY SSF52540 289 649 6.6E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01835 c40985f5a2aad7401f315d245bb15bc5 689 SUPERFAMILY SSF52540 214 450 1.26E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01835 c40985f5a2aad7401f315d245bb15bc5 689 Pfam PF00270 DEAD/DEAH box helicase 288 404 1.4E-16 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_01835 c40985f5a2aad7401f315d245bb15bc5 689 Gene3D G3DSA:2.40.50.140 44 139 2.9E-11 T 11-10-2018 AMS64_01835 c40985f5a2aad7401f315d245bb15bc5 689 Pfam PF00271 Helicase conserved C-terminal domain 477 584 8.5E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_01835 c40985f5a2aad7401f315d245bb15bc5 689 SUPERFAMILY SSF50249 6 172 5.14E-39 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_01835 c40985f5a2aad7401f315d245bb15bc5 689 SMART SM00490 501 585 3.8E-22 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_01835 c40985f5a2aad7401f315d245bb15bc5 689 Gene3D G3DSA:3.40.50.300 206 447 5.2E-83 T 11-10-2018 AMS64_01835 c40985f5a2aad7401f315d245bb15bc5 689 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 25 660 7.3E-227 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AMS64_05875 71923c3eaecce5955cc5f9bfb4d06c45 155 Pfam PF00182 Chitinase class I 52 101 6.6E-10 T 11-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMS64_05875 71923c3eaecce5955cc5f9bfb4d06c45 155 SUPERFAMILY SSF53955 1 140 1.27E-23 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_05875 71923c3eaecce5955cc5f9bfb4d06c45 155 Gene3D G3DSA:1.10.530.70 1 147 9.0E-15 T 11-10-2018 AMS64_13205 ceb2f499fb866aed82c5810501b6e8bb 282 Gene3D G3DSA:3.40.30.10 1 110 1.4E-16 T 11-10-2018 AMS64_13205 ceb2f499fb866aed82c5810501b6e8bb 282 SUPERFAMILY SSF52833 2 111 1.46E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_13205 ceb2f499fb866aed82c5810501b6e8bb 282 Pfam PF14559 Tetratricopeptide repeat 125 188 3.0E-7 T 11-10-2018 AMS64_13205 ceb2f499fb866aed82c5810501b6e8bb 282 Gene3D G3DSA:1.25.40.10 111 197 2.3E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_13205 ceb2f499fb866aed82c5810501b6e8bb 282 Pfam PF00085 Thioredoxin 3 106 1.1E-12 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMS64_13205 ceb2f499fb866aed82c5810501b6e8bb 282 Gene3D G3DSA:1.25.40.10 198 282 2.4E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_13205 ceb2f499fb866aed82c5810501b6e8bb 282 Pfam PF14561 Tetratricopeptide repeat 196 282 5.6E-25 T 11-10-2018 AMS64_16245 14ace9d5d85c25cd49713cd40f92db39 271 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 8 269 28.918 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 AMS64_16245 14ace9d5d85c25cd49713cd40f92db39 271 SUPERFAMILY SSF53335 15 205 3.44E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_16245 14ace9d5d85c25cd49713cd40f92db39 271 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 16 267 8.4E-62 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 AMS64_16245 14ace9d5d85c25cd49713cd40f92db39 271 Pfam PF08241 Methyltransferase domain 56 147 3.5E-28 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMS64_16245 14ace9d5d85c25cd49713cd40f92db39 271 Gene3D G3DSA:3.40.50.150 16 213 4.7E-39 T 11-10-2018 AMS64_12465 f1212dc369b7a7d501e2aebdb566821c 267 PIRSF PIRSF000097 1 266 1.8E-60 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMS64_12465 f1212dc369b7a7d501e2aebdb566821c 267 Gene3D G3DSA:3.20.20.100 1 267 1.0E-86 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMS64_12465 f1212dc369b7a7d501e2aebdb566821c 267 SUPERFAMILY SSF51430 3 261 8.51E-79 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMS64_12465 f1212dc369b7a7d501e2aebdb566821c 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 30 47 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMS64_12465 f1212dc369b7a7d501e2aebdb566821c 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 115 132 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMS64_12465 f1212dc369b7a7d501e2aebdb566821c 267 Pfam PF00248 Aldo/keto reductase family 6 250 1.1E-45 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMS64_12465 f1212dc369b7a7d501e2aebdb566821c 267 PRINTS PR00069 Aldo-keto reductase signature 115 132 6.2E-45 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMS64_12465 f1212dc369b7a7d501e2aebdb566821c 267 PRINTS PR00069 Aldo-keto reductase signature 187 211 6.2E-45 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMS64_12465 f1212dc369b7a7d501e2aebdb566821c 267 PRINTS PR00069 Aldo-keto reductase signature 82 100 6.2E-45 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMS64_12465 f1212dc369b7a7d501e2aebdb566821c 267 PRINTS PR00069 Aldo-keto reductase signature 26 50 6.2E-45 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMS64_12465 f1212dc369b7a7d501e2aebdb566821c 267 PRINTS PR00069 Aldo-keto reductase signature 150 179 6.2E-45 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMS64_08000 fc3917523588047b1238e1e49a0b53e4 264 Gene3D G3DSA:1.10.800.10 1 263 3.8E-99 T 11-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 AMS64_08000 fc3917523588047b1238e1e49a0b53e4 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 116 127 - T 11-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 AMS64_08000 fc3917523588047b1238e1e49a0b53e4 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 15 229 4.0E-47 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMS64_08000 fc3917523588047b1238e1e49a0b53e4 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 73 95 5.9E-10 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMS64_08000 fc3917523588047b1238e1e49a0b53e4 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 5.9E-10 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMS64_08000 fc3917523588047b1238e1e49a0b53e4 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 177 195 5.9E-10 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMS64_08000 fc3917523588047b1238e1e49a0b53e4 264 SUPERFAMILY SSF56534 5 247 1.44E-98 T 11-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily AMS64_08000 fc3917523588047b1238e1e49a0b53e4 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 9 252 1.1E-103 T 11-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 AMS64_16390 f0f4ddb3f43d2027689d3059e27e597d 564 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 104 468 9.9E-22 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AMS64_16390 f0f4ddb3f43d2027689d3059e27e597d 564 SUPERFAMILY SSF53383 88 563 1.29E-64 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_16390 f0f4ddb3f43d2027689d3059e27e597d 564 Gene3D G3DSA:3.40.640.10 127 447 2.8E-57 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_02740 2c4679b10300f3c0d82638e5b2b8f0c1 508 SUPERFAMILY SSF51206 347 479 6.15E-30 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMS64_02740 2c4679b10300f3c0d82638e5b2b8f0c1 508 Gene3D G3DSA:2.60.120.10 344 485 1.1E-30 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_02740 2c4679b10300f3c0d82638e5b2b8f0c1 508 PRINTS PR00103 cAMP-dependent protein kinase signature 419 428 4.4E-5 T 11-10-2018 AMS64_02740 2c4679b10300f3c0d82638e5b2b8f0c1 508 PRINTS PR00103 cAMP-dependent protein kinase signature 431 442 4.4E-5 T 11-10-2018 AMS64_02740 2c4679b10300f3c0d82638e5b2b8f0c1 508 PRINTS PR00103 cAMP-dependent protein kinase signature 375 389 4.4E-5 T 11-10-2018 AMS64_02740 2c4679b10300f3c0d82638e5b2b8f0c1 508 PRINTS PR00103 cAMP-dependent protein kinase signature 390 404 4.4E-5 T 11-10-2018 AMS64_02740 2c4679b10300f3c0d82638e5b2b8f0c1 508 SMART SM00100 354 474 1.2E-16 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_02740 2c4679b10300f3c0d82638e5b2b8f0c1 508 SUPERFAMILY SSF50182 156 218 9.48E-14 T 11-10-2018 IPR010920 LSM domain superfamily AMS64_02740 2c4679b10300f3c0d82638e5b2b8f0c1 508 Gene3D G3DSA:2.30.30.60 173 219 3.5E-7 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMS64_02740 2c4679b10300f3c0d82638e5b2b8f0c1 508 Pfam PF00924 Mechanosensitive ion channel 129 315 3.5E-27 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMS64_02740 2c4679b10300f3c0d82638e5b2b8f0c1 508 Pfam PF00027 Cyclic nucleotide-binding domain 375 458 7.2E-19 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_11100 fb72494e02d90d0503346d2b2759f37e 324 Gene3D G3DSA:3.40.50.1400 4 322 1.5E-97 T 11-10-2018 AMS64_11100 fb72494e02d90d0503346d2b2759f37e 324 TIGRFAM TIGR00109 hemH: ferrochelatase 3 322 3.5E-106 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMS64_11100 fb72494e02d90d0503346d2b2759f37e 324 Pfam PF00762 Ferrochelatase 4 322 4.3E-117 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMS64_11100 fb72494e02d90d0503346d2b2759f37e 324 SUPERFAMILY SSF53800 3 323 7.33E-105 T 11-10-2018 AMS64_11100 fb72494e02d90d0503346d2b2759f37e 324 ProSitePatterns PS00534 Ferrochelatase signature. 192 210 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMS64_11100 fb72494e02d90d0503346d2b2759f37e 324 Gene3D G3DSA:3.40.50.1400 166 304 1.5E-97 T 11-10-2018 AMS64_11100 fb72494e02d90d0503346d2b2759f37e 324 Hamap MF_00323 Ferrochelatase [hemH]. 3 323 37.54 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMS64_03520 352b4c5a3407d670750c0ce64fad46c9 154 Gene3D G3DSA:3.90.960.10 1 153 1.1E-49 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMS64_03520 352b4c5a3407d670750c0ce64fad46c9 154 PIRSF PIRSF006181 1 154 4.2E-52 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMS64_03520 352b4c5a3407d670750c0ce64fad46c9 154 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 150 4.4E-53 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMS64_03520 352b4c5a3407d670750c0ce64fad46c9 154 Pfam PF04073 Aminoacyl-tRNA editing domain 31 142 2.7E-25 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMS64_03520 352b4c5a3407d670750c0ce64fad46c9 154 SUPERFAMILY SSF55826 2 151 7.46E-38 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMS64_20915 51b21332c9e53fa1e5bd86ee777ac3b9 204 Pfam PF03922 OmpW family 22 204 8.5E-57 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AMS64_20915 51b21332c9e53fa1e5bd86ee777ac3b9 204 Gene3D G3DSA:2.40.160.20 21 204 1.0E-69 T 11-10-2018 AMS64_20915 51b21332c9e53fa1e5bd86ee777ac3b9 204 SUPERFAMILY SSF56925 22 204 1.7E-31 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMS64_20915 51b21332c9e53fa1e5bd86ee777ac3b9 204 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 196 204 - T 11-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 SMART SM00958 228 358 2.3E-81 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 339 361 1.7E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 101 115 1.7E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 413 426 1.7E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 63 87 1.7E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 376 393 1.7E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 170 190 1.7E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 117 127 1.7E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 SUPERFAMILY SSF81767 227 368 6.28E-43 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 Gene3D G3DSA:1.10.3060.10 621 833 8.1E-79 T 11-10-2018 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.025 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 Pfam PF01043 SecA preprotein cross-linking domain 232 358 8.5E-37 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 SMART SM00957 6 402 0.0 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 SUPERFAMILY SSF52540 417 618 6.19E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 ProSitePatterns PS01312 SecA family signature. 500 515 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 SUPERFAMILY SSF81886 620 894 1.24E-83 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 Pfam PF07516 SecA Wing and Scaffold domain 617 830 3.5E-70 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 Pfam PF07517 SecA DEAD-like domain 7 402 1.8E-133 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 Gene3D G3DSA:3.40.50.300 22 415 3.8E-176 T 11-10-2018 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 Gene3D G3DSA:3.40.50.300 417 620 9.0E-90 T 11-10-2018 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 Gene3D G3DSA:3.90.1440.10 229 368 3.8E-176 T 11-10-2018 AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 Pfam PF02810 SEC-C motif 886 904 1.1E-10 T 11-10-2018 IPR004027 SEC-C motif AMS64_03285 ef54b6931250641c5d3c70de691cda1b 906 SUPERFAMILY SSF52540 6 415 1.28E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09110 9c70e8495a654a1338aba4a956c21aa3 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.6 T 11-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AMS64_09110 9c70e8495a654a1338aba4a956c21aa3 298 Pfam PF08029 HisG, C-terminal domain 222 295 9.4E-25 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMS64_09110 9c70e8495a654a1338aba4a956c21aa3 298 SUPERFAMILY SSF53850 5 222 2.68E-69 T 11-10-2018 AMS64_09110 9c70e8495a654a1338aba4a956c21aa3 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 1.4E-49 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMS64_09110 9c70e8495a654a1338aba4a956c21aa3 298 SUPERFAMILY SSF54913 225 297 6.34E-22 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMS64_09110 9c70e8495a654a1338aba4a956c21aa3 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AMS64_09110 9c70e8495a654a1338aba4a956c21aa3 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 195 8.3E-58 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMS64_09110 9c70e8495a654a1338aba4a956c21aa3 298 Gene3D G3DSA:3.40.190.10 102 191 3.8E-72 T 11-10-2018 AMS64_09110 9c70e8495a654a1338aba4a956c21aa3 298 Gene3D G3DSA:3.40.190.10 6 219 3.8E-72 T 11-10-2018 AMS64_09110 9c70e8495a654a1338aba4a956c21aa3 298 Gene3D G3DSA:3.30.70.120 225 298 1.5E-34 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMS64_09110 9c70e8495a654a1338aba4a956c21aa3 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 201 297 3.9E-30 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMS64_10225 247b263b47804a629159e707174e2318 139 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 24 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AMS64_10225 247b263b47804a629159e707174e2318 139 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 9.2E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10225 247b263b47804a629159e707174e2318 139 Gene3D G3DSA:2.20.25.90 1 55 3.3E-19 T 11-10-2018 AMS64_10225 247b263b47804a629159e707174e2318 139 SMART SM00926 1 54 2.6E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10225 247b263b47804a629159e707174e2318 139 Gene3D G3DSA:3.40.50.740 61 139 1.9E-30 T 11-10-2018 AMS64_10225 247b263b47804a629159e707174e2318 139 SUPERFAMILY SSF53706 1 139 3.4E-49 T 11-10-2018 AMS64_10225 247b263b47804a629159e707174e2318 139 Pfam PF00384 Molybdopterin oxidoreductase 61 138 5.0E-17 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_04985 e4dee909171ca045ef6c5c06c092ed19 346 Gene3D G3DSA:3.30.420.10 160 327 2.2E-15 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_04985 e4dee909171ca045ef6c5c06c092ed19 346 Pfam PF13551 Winged helix-turn helix 10 74 2.4E-7 T 11-10-2018 AMS64_04985 e4dee909171ca045ef6c5c06c092ed19 346 SUPERFAMILY SSF53098 164 330 7.59E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_04985 e4dee909171ca045ef6c5c06c092ed19 346 Pfam PF00665 Integrase core domain 162 282 2.0E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_04985 e4dee909171ca045ef6c5c06c092ed19 346 SUPERFAMILY SSF46689 12 114 3.94E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_09175 ba9b0ac6a5a57e106ff99c15f543ee63 476 Gene3D G3DSA:1.10.287.950 147 476 5.6E-68 T 11-10-2018 AMS64_09175 ba9b0ac6a5a57e106ff99c15f543ee63 476 SMART SM00283 214 475 3.0E-64 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_09175 ba9b0ac6a5a57e106ff99c15f543ee63 476 SUPERFAMILY SSF58104 166 475 3.92E-70 T 11-10-2018 AMS64_09175 ba9b0ac6a5a57e106ff99c15f543ee63 476 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 261 440 2.4E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_09175 ba9b0ac6a5a57e106ff99c15f543ee63 476 SMART SM00304 146 199 0.38 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_09175 ba9b0ac6a5a57e106ff99c15f543ee63 476 SMART SM00304 234 308 28.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_17215 5f3b79b6caa018055603b95b29fec9e6 288 PRINTS PR00810 Bacterial general secretion pathway protein C signature 240 250 7.1E-6 T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AMS64_17215 5f3b79b6caa018055603b95b29fec9e6 288 PRINTS PR00810 Bacterial general secretion pathway protein C signature 108 117 7.1E-6 T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AMS64_17215 5f3b79b6caa018055603b95b29fec9e6 288 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 29 286 3.4E-70 T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AMS64_17215 5f3b79b6caa018055603b95b29fec9e6 288 SUPERFAMILY SSF50156 189 286 5.26E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMS64_17215 5f3b79b6caa018055603b95b29fec9e6 288 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 224 250 - T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AMS64_17215 5f3b79b6caa018055603b95b29fec9e6 288 Gene3D G3DSA:2.30.42.10 184 285 2.4E-22 T 11-10-2018 AMS64_17215 5f3b79b6caa018055603b95b29fec9e6 288 Pfam PF11356 Type II secretion system protein C 32 171 2.6E-40 T 11-10-2018 IPR024961 Type II secretion system protein C, N-terminal AMS64_17215 5f3b79b6caa018055603b95b29fec9e6 288 Gene3D G3DSA:2.30.30.830 105 172 2.2E-26 T 11-10-2018 AMS64_07230 f9ba18a5133b63966fb6c4b1012f787d 508 SMART SM00304 234 284 94.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_07230 f9ba18a5133b63966fb6c4b1012f787d 508 SMART SM00304 177 231 8.4E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_07230 f9ba18a5133b63966fb6c4b1012f787d 508 Gene3D G3DSA:1.10.287.950 177 508 8.1E-71 T 11-10-2018 AMS64_07230 f9ba18a5133b63966fb6c4b1012f787d 508 SMART SM00283 246 507 6.4E-66 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_07230 f9ba18a5133b63966fb6c4b1012f787d 508 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 309 473 2.0E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_07230 f9ba18a5133b63966fb6c4b1012f787d 508 SUPERFAMILY SSF58104 199 508 1.1E-72 T 11-10-2018 AMS64_07230 f9ba18a5133b63966fb6c4b1012f787d 508 Pfam PF00672 HAMP domain 177 228 1.2E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_09130 eb36451e60d32b44e2d2b9766678ea68 171 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 2 165 3.6E-30 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AMS64_09130 eb36451e60d32b44e2d2b9766678ea68 171 PIRSF PIRSF004982 1 171 1.8E-54 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AMS64_09130 eb36451e60d32b44e2d2b9766678ea68 171 Pfam PF03843 Outer membrane lipoprotein Slp family 15 162 8.6E-44 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AMS64_10780 44227819b568c4dc6c97423b7134182b 208 SUPERFAMILY SSF53098 29 197 7.21E-33 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_10780 44227819b568c4dc6c97423b7134182b 208 Gene3D G3DSA:3.30.420.10 28 200 6.7E-32 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_10780 44227819b568c4dc6c97423b7134182b 208 SMART SM00479 30 203 1.5E-22 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMS64_10780 44227819b568c4dc6c97423b7134182b 208 Pfam PF00929 Exonuclease 32 194 8.5E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMS64_12985 d3eee6b8ae0adf18b988fbecdfc440a4 185 Gene3D G3DSA:2.60.120.10 7 173 3.6E-36 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_12985 d3eee6b8ae0adf18b988fbecdfc440a4 185 Pfam PF05962 HutD 8 177 2.9E-42 T 11-10-2018 IPR010282 Uncharacterised protein family HutD/Ves AMS64_12985 d3eee6b8ae0adf18b988fbecdfc440a4 185 Gene3D G3DSA:2.60.120.10 11 111 3.6E-36 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_12985 d3eee6b8ae0adf18b988fbecdfc440a4 185 SUPERFAMILY SSF51182 2 182 5.34E-41 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_18610 b76b6c4d533b0d8667429c7732d0b73e 275 Pfam PF00106 short chain dehydrogenase 4 189 1.3E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_18610 b76b6c4d533b0d8667429c7732d0b73e 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_18610 b76b6c4d533b0d8667429c7732d0b73e 275 Gene3D G3DSA:3.40.50.720 3 259 1.5E-58 T 11-10-2018 AMS64_18610 b76b6c4d533b0d8667429c7732d0b73e 275 SUPERFAMILY SSF51735 2 270 1.23E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_18610 b76b6c4d533b0d8667429c7732d0b73e 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.9E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_18610 b76b6c4d533b0d8667429c7732d0b73e 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.9E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_18610 b76b6c4d533b0d8667429c7732d0b73e 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.9E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_18610 b76b6c4d533b0d8667429c7732d0b73e 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.9E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_18610 b76b6c4d533b0d8667429c7732d0b73e 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.9E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_01155 6464f20aa5c76e21da2940c2cce7b6b9 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 4.0E-75 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AMS64_01155 6464f20aa5c76e21da2940c2cce7b6b9 224 Pfam PF04002 RadC-like JAB domain 104 222 8.4E-43 T 11-10-2018 IPR025657 RadC-like JAB domain AMS64_01155 6464f20aa5c76e21da2940c2cce7b6b9 224 SUPERFAMILY SSF47781 18 90 2.11E-11 T 11-10-2018 IPR010994 RuvA domain 2-like AMS64_01155 6464f20aa5c76e21da2940c2cce7b6b9 224 SUPERFAMILY SSF102712 114 191 3.79E-7 T 11-10-2018 AMS64_01155 6464f20aa5c76e21da2940c2cce7b6b9 224 Gene3D G3DSA:1.10.150.20 34 87 3.9E-5 T 11-10-2018 AMS64_01155 6464f20aa5c76e21da2940c2cce7b6b9 224 Gene3D G3DSA:3.40.140.10 102 224 1.8E-41 T 11-10-2018 AMS64_01155 6464f20aa5c76e21da2940c2cce7b6b9 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 Gene3D G3DSA:3.30.1360.40 236 333 2.5E-236 T 11-10-2018 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 2.2E-156 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 Gene3D G3DSA:3.90.199.10 33 521 2.5E-236 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 SUPERFAMILY SSF101904 747 888 2.88E-40 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 Gene3D G3DSA:1.10.268.10 370 493 2.5E-236 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 SUPERFAMILY SSF56719 30 521 1.11E-186 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 879 24.717 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 SMART SM00434 11 499 9.1E-301 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 713 0.0 T 11-10-2018 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 831 876 2.0E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 8.9E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 638 2.9E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 3.7E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 749 775 1.0E-5 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 708 1.0 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 782 827 2.5E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMS64_09290 2b72b81f61d5940e4b70f8b795b9cfe3 915 SUPERFAMILY SSF101904 533 709 1.19E-65 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMS64_06210 9e52d96a2434b010fb5aa74922e1144a 113 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 6.5E-38 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMS64_06210 9e52d96a2434b010fb5aa74922e1144a 113 SUPERFAMILY SSF81301 3 111 1.96E-38 T 11-10-2018 AMS64_06210 9e52d96a2434b010fb5aa74922e1144a 113 Gene3D G3DSA:3.30.460.10 2 113 3.3E-37 T 11-10-2018 AMS64_06210 9e52d96a2434b010fb5aa74922e1144a 113 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.423 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMS64_06210 9e52d96a2434b010fb5aa74922e1144a 113 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.0E-27 T 11-10-2018 AMS64_12300 7d20bc80b16f63aa0691f72f65590446 175 SUPERFAMILY SSF50249 4 162 1.51E-59 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_12300 7d20bc80b16f63aa0691f72f65590446 175 Pfam PF00436 Single-strand binding protein family 6 107 2.2E-42 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AMS64_12300 7d20bc80b16f63aa0691f72f65590446 175 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 162 3.9E-58 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMS64_12300 7d20bc80b16f63aa0691f72f65590446 175 Gene3D G3DSA:2.40.50.140 2 151 7.0E-50 T 11-10-2018 AMS64_12300 7d20bc80b16f63aa0691f72f65590446 175 PIRSF PIRSF002070 2 161 1.5E-40 T 11-10-2018 AMS64_12300 7d20bc80b16f63aa0691f72f65590446 175 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 38.51 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMS64_09685 7f102bf8e3bb8be95d297ccf9ea41857 262 Gene3D G3DSA:1.25.40.10 14 260 3.9E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_09685 7f102bf8e3bb8be95d297ccf9ea41857 262 SUPERFAMILY SSF48452 92 174 4.74E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_09685 7f102bf8e3bb8be95d297ccf9ea41857 262 SUPERFAMILY SSF48452 150 247 8.34E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_01355 c6bbe36fed8f2b0d14155ccd4e28d1c5 151 Gene3D G3DSA:1.10.760.10 65 151 2.1E-34 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_01355 c6bbe36fed8f2b0d14155ccd4e28d1c5 151 PRINTS PR00607 Class IE cytochrome C signature 122 134 3.7E-13 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AMS64_01355 c6bbe36fed8f2b0d14155ccd4e28d1c5 151 PRINTS PR00607 Class IE cytochrome C signature 137 148 3.7E-13 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AMS64_01355 c6bbe36fed8f2b0d14155ccd4e28d1c5 151 PRINTS PR00607 Class IE cytochrome C signature 90 100 3.7E-13 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AMS64_01355 c6bbe36fed8f2b0d14155ccd4e28d1c5 151 PRINTS PR00607 Class IE cytochrome C signature 79 90 3.7E-13 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AMS64_01355 c6bbe36fed8f2b0d14155ccd4e28d1c5 151 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 70 147 2.8E-16 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_01355 c6bbe36fed8f2b0d14155ccd4e28d1c5 151 SUPERFAMILY SSF46626 53 147 5.3E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_12400 51534a62c4c5d22efb7040e9a95c480f 362 SUPERFAMILY SSF51695 29 354 1.33E-92 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMS64_12400 51534a62c4c5d22efb7040e9a95c480f 362 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 33 349 4.8E-68 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMS64_12400 51534a62c4c5d22efb7040e9a95c480f 362 Gene3D G3DSA:3.20.20.190 27 355 8.6E-125 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMS64_21475 6559d54033051cf016ee07e20585cef3 314 Pfam PF00491 Arginase family 43 310 3.3E-61 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AMS64_21475 6559d54033051cf016ee07e20585cef3 314 PIRSF PIRSF036979 26 313 7.8E-25 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AMS64_21475 6559d54033051cf016ee07e20585cef3 314 SUPERFAMILY SSF52768 11 310 8.1E-81 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AMS64_21475 6559d54033051cf016ee07e20585cef3 314 PRINTS PR00116 Arginase signature 123 138 2.0E-5 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AMS64_21475 6559d54033051cf016ee07e20585cef3 314 PRINTS PR00116 Arginase signature 240 269 2.0E-5 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AMS64_21475 6559d54033051cf016ee07e20585cef3 314 PRINTS PR00116 Arginase signature 275 289 2.0E-5 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AMS64_21475 6559d54033051cf016ee07e20585cef3 314 Hamap MF_00737 Formimidoylglutamase [hutG]. 7 314 42.357 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AMS64_21475 6559d54033051cf016ee07e20585cef3 314 Gene3D G3DSA:3.40.800.10 4 314 5.8E-113 T 11-10-2018 AMS64_21475 6559d54033051cf016ee07e20585cef3 314 TIGRFAM TIGR01227 hutG: formimidoylglutamase 12 311 3.3E-98 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AMS64_10185 631e4f2f0c37e4d4dabb871d2e6dc171 461 Pfam PF01212 Beta-eliminating lyase 46 427 6.0E-95 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AMS64_10185 631e4f2f0c37e4d4dabb871d2e6dc171 461 SUPERFAMILY SSF53383 2 461 1.38E-137 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_10185 631e4f2f0c37e4d4dabb871d2e6dc171 461 PIRSF PIRSF001386 1 461 3.9E-219 T 11-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 AMS64_10185 631e4f2f0c37e4d4dabb871d2e6dc171 461 Gene3D G3DSA:3.90.1150.10 6 456 2.3E-207 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_10185 631e4f2f0c37e4d4dabb871d2e6dc171 461 Hamap MF_00544 Tryptophanase [tnaA]. 1 461 106.063 T 11-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 AMS64_10185 631e4f2f0c37e4d4dabb871d2e6dc171 461 Gene3D G3DSA:3.40.640.10 58 322 2.3E-207 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_10305 84269609660c39e228a2bf49c7ccaa6a 372 Pfam PF01924 Hydrogenase formation hypA family 16 366 1.0E-150 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 AMS64_10305 84269609660c39e228a2bf49c7ccaa6a 372 Gene3D G3DSA:3.40.50.11740 66 304 3.7E-105 T 11-10-2018 AMS64_10305 84269609660c39e228a2bf49c7ccaa6a 372 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 9 369 4.0E-151 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 AMS64_10305 84269609660c39e228a2bf49c7ccaa6a 372 Gene3D G3DSA:1.10.10.2140 318 369 6.7E-24 T 11-10-2018 AMS64_10305 84269609660c39e228a2bf49c7ccaa6a 372 PIRSF PIRSF005622 5 372 7.2E-157 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 AMS64_10305 84269609660c39e228a2bf49c7ccaa6a 372 Gene3D G3DSA:3.40.50.11750 22 263 3.7E-105 T 11-10-2018 AMS64_18125 268c92e7e444599768265c69d396f744 282 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 24 133 1.3E-48 T 11-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMS64_18125 268c92e7e444599768265c69d396f744 282 Pfam PF14489 QueF-like protein 196 269 3.1E-25 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMS64_18125 268c92e7e444599768265c69d396f744 282 SUPERFAMILY SSF55620 186 266 8.15E-9 T 11-10-2018 AMS64_18125 268c92e7e444599768265c69d396f744 282 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 282 163.157 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMS64_18125 268c92e7e444599768265c69d396f744 282 TIGRFAM TIGR03138 QueF: queuine synthase 15 282 1.7E-126 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMS64_18125 268c92e7e444599768265c69d396f744 282 Gene3D G3DSA:3.30.1130.10 145 282 5.9E-60 T 11-10-2018 AMS64_18125 268c92e7e444599768265c69d396f744 282 Gene3D G3DSA:3.30.1130.10 24 140 2.0E-45 T 11-10-2018 AMS64_18125 268c92e7e444599768265c69d396f744 282 PIRSF PIRSF004750 10 282 3.5E-126 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 SMART SM00382 153 366 1.9E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 SMART SM00760 364 433 7.4E-45 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 ProSitePatterns PS01008 DnaA protein signature. 414 433 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 Gene3D G3DSA:3.30.300.180 2 113 2.1E-35 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 SUPERFAMILY SSF48295 353 455 2.2E-37 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 Gene3D G3DSA:3.40.50.300 120 286 6.8E-51 T 11-10-2018 AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 365 433 3.8E-32 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 Gene3D G3DSA:1.10.1750.10 363 456 4.0E-39 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 SUPERFAMILY SSF52540 121 332 1.84E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 414 433 1.3E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 252 279 1.3E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 218 232 1.3E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 186 200 1.3E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 154 174 1.3E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 Pfam PF00308 Bacterial dnaA protein 122 338 2.4E-99 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 Pfam PF11638 DnaA N-terminal domain 4 62 1.3E-19 T 11-10-2018 IPR024633 DnaA N-terminal domain AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 Gene3D G3DSA:1.10.8.60 287 357 2.3E-24 T 11-10-2018 AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 454 2.2E-186 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMS64_00430 6c7511607c8cfe7017ef9c7670d35ce6 456 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 455 34.419 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMS64_01010 335c3f7fadeefd12b71558d7baef62e9 493 SUPERFAMILY SSF51735 28 209 3.95E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_01010 335c3f7fadeefd12b71558d7baef62e9 493 SUPERFAMILY SSF48179 348 486 4.08E-40 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_01010 335c3f7fadeefd12b71558d7baef62e9 493 Gene3D G3DSA:3.40.50.720 1 208 1.3E-85 T 11-10-2018 AMS64_01010 335c3f7fadeefd12b71558d7baef62e9 493 SUPERFAMILY SSF48179 210 370 6.63E-41 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_01010 335c3f7fadeefd12b71558d7baef62e9 493 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 1.0E-129 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMS64_01010 335c3f7fadeefd12b71558d7baef62e9 493 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 34 204 1.9E-58 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMS64_01010 335c3f7fadeefd12b71558d7baef62e9 493 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 3.3E-26 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMS64_01010 335c3f7fadeefd12b71558d7baef62e9 493 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 352 484 4.5E-20 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMS64_01010 335c3f7fadeefd12b71558d7baef62e9 493 Gene3D G3DSA:1.10.1040.10 209 493 7.9E-119 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMS64_01010 335c3f7fadeefd12b71558d7baef62e9 493 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 487 38.019 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMS64_14655 01f5d40fd3c2ce676281dd0e1abf947a 554 SUPERFAMILY SSF56235 1 196 2.06E-56 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_14655 01f5d40fd3c2ce676281dd0e1abf947a 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 374 2.5E-118 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AMS64_14655 01f5d40fd3c2ce676281dd0e1abf947a 554 Gene3D G3DSA:3.60.20.10 2 193 2.1E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_14655 01f5d40fd3c2ce676281dd0e1abf947a 554 Gene3D G3DSA:3.40.50.620 194 514 2.6E-113 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_14655 01f5d40fd3c2ce676281dd0e1abf947a 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 2.6E-40 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AMS64_14655 01f5d40fd3c2ce676281dd0e1abf947a 554 PIRSF PIRSF001589 363 507 2.2E-29 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AMS64_14655 01f5d40fd3c2ce676281dd0e1abf947a 554 PIRSF PIRSF001589 1 367 3.1E-107 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AMS64_14655 01f5d40fd3c2ce676281dd0e1abf947a 554 SUPERFAMILY SSF52402 211 478 5.24E-74 T 11-10-2018 AMS64_14655 01f5d40fd3c2ce676281dd0e1abf947a 554 Pfam PF00733 Asparagine synthase 211 366 1.3E-57 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AMS64_03080 6a56445d3a5a3db09dd4203027909b99 246 Pfam PF13144 Chaperone for flagella basal body P-ring formation 45 243 2.0E-41 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AMS64_03080 6a56445d3a5a3db09dd4203027909b99 246 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 109 244 2.4E-36 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AMS64_03080 6a56445d3a5a3db09dd4203027909b99 246 Gene3D G3DSA:2.30.30.760 185 246 4.7E-12 T 11-10-2018 AMS64_03080 6a56445d3a5a3db09dd4203027909b99 246 SMART SM00858 121 183 1.9E-7 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMS64_01065 0b1c853d8421159331658dfdbb9007c2 443 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 77 274 2.1E-21 T 11-10-2018 IPR000477 Reverse transcriptase domain AMS64_01065 0b1c853d8421159331658dfdbb9007c2 443 SUPERFAMILY SSF56672 20 306 1.13E-21 T 11-10-2018 AMS64_17985 2ca1843afcbc0b7f02cb028140470fa2 153 SUPERFAMILY SSF54637 8 149 5.45E-49 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_17985 2ca1843afcbc0b7f02cb028140470fa2 153 Pfam PF07977 FabA-like domain 17 145 2.0E-38 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_17985 2ca1843afcbc0b7f02cb028140470fa2 153 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 152 36.314 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_17985 2ca1843afcbc0b7f02cb028140470fa2 153 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 9 149 5.2E-59 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_17985 2ca1843afcbc0b7f02cb028140470fa2 153 Gene3D G3DSA:3.10.129.10 5 151 6.3E-61 T 11-10-2018 AMS64_19310 aa99f1caa5291dd4a324495a1e945960 222 Pfam PF00483 Nucleotidyl transferase 2 121 1.1E-20 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMS64_19310 aa99f1caa5291dd4a324495a1e945960 222 Gene3D G3DSA:3.90.550.10 1 222 5.9E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_19310 aa99f1caa5291dd4a324495a1e945960 222 SUPERFAMILY SSF53448 1 217 3.15E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_21360 ae5f864785b114c7515a3b927a799998 1234 SUPERFAMILY SSF51126 163 279 1.13E-5 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AMS64_21360 ae5f864785b114c7515a3b927a799998 1234 Gene3D G3DSA:2.60.120.200 302 541 3.0E-8 T 11-10-2018 AMS64_21360 ae5f864785b114c7515a3b927a799998 1234 SUPERFAMILY SSF49899 285 539 4.49E-25 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMS64_01560 2d8ec66ddd1b7e2efacd8c9cfe78fbbb 189 SUPERFAMILY SSF88659 124 184 6.73E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_01560 2d8ec66ddd1b7e2efacd8c9cfe78fbbb 189 Pfam PF04545 Sigma-70, region 4 134 182 1.2E-13 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMS64_01560 2d8ec66ddd1b7e2efacd8c9cfe78fbbb 189 Pfam PF04542 Sigma-70 region 2 27 94 9.4E-19 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_01560 2d8ec66ddd1b7e2efacd8c9cfe78fbbb 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 183 7.3E-30 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMS64_01560 2d8ec66ddd1b7e2efacd8c9cfe78fbbb 189 SUPERFAMILY SSF88946 9 108 9.1E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_01560 2d8ec66ddd1b7e2efacd8c9cfe78fbbb 189 Gene3D G3DSA:1.10.10.10 94 186 9.9E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_01560 2d8ec66ddd1b7e2efacd8c9cfe78fbbb 189 Gene3D G3DSA:1.10.1740.10 7 91 3.7E-26 T 11-10-2018 AMS64_14015 879f24dce3d9846ed8110e0b4c06f3ee 141 Gene3D G3DSA:3.10.450.430 2 140 1.5E-35 T 11-10-2018 AMS64_14015 879f24dce3d9846ed8110e0b4c06f3ee 141 Pfam PF10980 Protein of unknown function (DUF2787) 21 139 5.5E-33 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AMS64_07825 27d3620799a6613bd5c1c03cba87ccad 117 Gene3D G3DSA:1.25.40.10 2 117 8.5E-48 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_07825 27d3620799a6613bd5c1c03cba87ccad 117 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 2 115 3.5E-42 T 11-10-2018 IPR013348 Type III secretion system YscG GO:0009405 AMS64_07825 27d3620799a6613bd5c1c03cba87ccad 117 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 2 116 1.7E-59 T 11-10-2018 IPR013348 Type III secretion system YscG GO:0009405 AMS64_13730 27d3620799a6613bd5c1c03cba87ccad 117 Gene3D G3DSA:1.25.40.10 2 117 8.5E-48 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_13730 27d3620799a6613bd5c1c03cba87ccad 117 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 2 115 3.5E-42 T 11-10-2018 IPR013348 Type III secretion system YscG GO:0009405 AMS64_13730 27d3620799a6613bd5c1c03cba87ccad 117 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 2 116 1.7E-59 T 11-10-2018 IPR013348 Type III secretion system YscG GO:0009405 AMS64_19105 5e508a761c230c7765ca9224b012101e 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 342 3.3E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_19105 5e508a761c230c7765ca9224b012101e 347 Gene3D G3DSA:1.10.3720.10 133 339 7.0E-15 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_19105 5e508a761c230c7765ca9224b012101e 347 SUPERFAMILY SSF161098 139 325 4.06E-17 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_18140 5cfcbda9410f07d3c83f480350795d8d 451 Gene3D G3DSA:3.30.1850.10 1 118 1.5E-54 T 11-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AMS64_18140 5cfcbda9410f07d3c83f480350795d8d 451 SUPERFAMILY SSF102405 120 327 1.6E-40 T 11-10-2018 AMS64_18140 5cfcbda9410f07d3c83f480350795d8d 451 Gene3D G3DSA:3.40.50.450 119 449 8.8E-121 T 11-10-2018 AMS64_18140 5cfcbda9410f07d3c83f480350795d8d 451 Pfam PF03641 Possible lysine decarboxylase 187 325 3.1E-32 T 11-10-2018 IPR031100 LOG family AMS64_18140 5cfcbda9410f07d3c83f480350795d8d 451 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 2.8E-58 T 11-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AMS64_18140 5cfcbda9410f07d3c83f480350795d8d 451 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 1.3E-50 T 11-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AMS64_14260 a684571ea17d43fd736920bb76ebef0d 235 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 1.0E-84 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AMS64_14260 a684571ea17d43fd736920bb76ebef0d 235 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.188 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AMS64_14260 a684571ea17d43fd736920bb76ebef0d 235 PIRSF PIRSF006293 1 222 9.1E-83 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AMS64_14260 a684571ea17d43fd736920bb76ebef0d 235 Gene3D G3DSA:3.40.50.620 1 230 2.5E-79 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_14260 a684571ea17d43fd736920bb76ebef0d 235 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.2E-83 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AMS64_14260 a684571ea17d43fd736920bb76ebef0d 235 SUPERFAMILY SSF52402 1 212 4.41E-67 T 11-10-2018 AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 Gene3D G3DSA:3.40.50.720 376 668 4.5E-116 T 11-10-2018 AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 648 1.4E-23 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 Gene3D G3DSA:3.20.20.70 3 369 7.0E-125 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 Gene3D G3DSA:3.50.50.60 472 628 4.5E-116 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 SUPERFAMILY SSF51905 373 608 2.07E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 496 520 2.5E-6 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 377 399 2.5E-6 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 2.3E-85 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 SUPERFAMILY SSF51395 3 363 2.59E-113 T 11-10-2018 AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 621 637 3.4E-17 T 11-10-2018 AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 3.4E-17 T 11-10-2018 AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 460 478 3.4E-17 T 11-10-2018 AMS64_19050 e6cacea05906cd898ad5b1fe415f60c9 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 500 518 3.4E-17 T 11-10-2018 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 Pfam PF00750 tRNA synthetases class I (R) 102 450 1.4E-157 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 157 170 2.4E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 133 149 2.4E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 118 133 2.4E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 307 328 2.4E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 SMART SM01016 3 91 1.2E-39 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 Gene3D G3DSA:1.10.730.10 458 581 8.1E-35 T 11-10-2018 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 24 581 1.6E-183 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 Gene3D G3DSA:3.30.1360.70 2 109 1.1E-29 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 SUPERFAMILY SSF47323 458 581 2.94E-34 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 581 27.314 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 SUPERFAMILY SSF55190 8 103 3.66E-25 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 SUPERFAMILY SSF52374 114 457 1.92E-90 T 11-10-2018 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 Gene3D G3DSA:3.40.50.620 112 457 1.6E-106 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 SMART SM00836 464 581 7.5E-38 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 91 2.7E-25 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMS64_01550 65478841c1442a48b2ef36e4d36f0aee 581 Pfam PF05746 DALR anticodon binding domain 464 581 6.3E-32 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMS64_20540 ec17c41ca553261ae43f84c985d14c82 295 Gene3D G3DSA:3.20.20.70 9 53 2.6E-12 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_20540 ec17c41ca553261ae43f84c985d14c82 295 Pfam PF13353 4Fe-4S single cluster domain 21 143 3.2E-10 T 11-10-2018 AMS64_20540 ec17c41ca553261ae43f84c985d14c82 295 Pfam PF04055 Radical SAM superfamily 30 224 2.5E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_20540 ec17c41ca553261ae43f84c985d14c82 295 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 288 3.5E-104 T 11-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW AMS64_20540 ec17c41ca553261ae43f84c985d14c82 295 SUPERFAMILY SSF54862 50 132 7.95E-14 T 11-10-2018 AMS64_20540 ec17c41ca553261ae43f84c985d14c82 295 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AMS64_20540 ec17c41ca553261ae43f84c985d14c82 295 SUPERFAMILY SSF102114 90 280 3.14E-10 T 11-10-2018 AMS64_20540 ec17c41ca553261ae43f84c985d14c82 295 Gene3D G3DSA:3.80.30.10 117 277 2.2E-19 T 11-10-2018 AMS64_20540 ec17c41ca553261ae43f84c985d14c82 295 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 80 91 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_20540 ec17c41ca553261ae43f84c985d14c82 295 PIRSF PIRSF000371 2 285 4.9E-71 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AMS64_20540 ec17c41ca553261ae43f84c985d14c82 295 Gene3D G3DSA:3.30.70.20 54 95 1.5E-10 T 11-10-2018 AMS64_21405 12b172ba5da7537a4f61a1c524bfe041 569 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 384 398 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_21405 12b172ba5da7537a4f61a1c524bfe041 569 Gene3D G3DSA:3.30.300.160 64 146 5.6E-9 T 11-10-2018 AMS64_21405 12b172ba5da7537a4f61a1c524bfe041 569 Gene3D G3DSA:3.30.450.90 153 289 3.4E-42 T 11-10-2018 AMS64_21405 12b172ba5da7537a4f61a1c524bfe041 569 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 43 149 2.7E-24 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal AMS64_21405 12b172ba5da7537a4f61a1c524bfe041 569 Gene3D G3DSA:3.40.50.300 291 568 1.7E-100 T 11-10-2018 AMS64_21405 12b172ba5da7537a4f61a1c524bfe041 569 Pfam PF00437 Type II/IV secretion system protein 195 456 1.9E-77 T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_21405 12b172ba5da7537a4f61a1c524bfe041 569 SMART SM00382 317 438 7.3E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_21405 12b172ba5da7537a4f61a1c524bfe041 569 SUPERFAMILY SSF160246 2 146 5.1E-39 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AMS64_21405 12b172ba5da7537a4f61a1c524bfe041 569 SUPERFAMILY SSF52540 176 563 1.88E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_03500 457d9d84fe4beb5e94840641a981f704 259 PIRSF PIRSF000728 1 258 6.0E-68 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMS64_03500 457d9d84fe4beb5e94840641a981f704 259 Pfam PF00696 Amino acid kinase family 5 236 2.9E-41 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMS64_03500 457d9d84fe4beb5e94840641a981f704 259 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 234 8.8E-64 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMS64_03500 457d9d84fe4beb5e94840641a981f704 259 SUPERFAMILY SSF53633 4 257 3.93E-62 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_03500 457d9d84fe4beb5e94840641a981f704 259 Hamap MF_00082 Acetylglutamate kinase [argB]. 3 252 41.908 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMS64_03500 457d9d84fe4beb5e94840641a981f704 259 Gene3D G3DSA:3.40.1160.10 1 259 2.6E-71 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_14345 affb2076295aeeca58b50f173ffb84d1 650 Gene3D G3DSA:3.30.70.270 213 389 5.8E-53 T 11-10-2018 AMS64_14345 affb2076295aeeca58b50f173ffb84d1 650 SMART SM00267 205 376 1.6E-50 T 11-10-2018 IPR000160 GGDEF domain AMS64_14345 affb2076295aeeca58b50f173ffb84d1 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 218 370 8.7E-40 T 11-10-2018 IPR000160 GGDEF domain AMS64_14345 affb2076295aeeca58b50f173ffb84d1 650 Gene3D G3DSA:3.20.20.450 390 631 1.0E-83 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_14345 affb2076295aeeca58b50f173ffb84d1 650 Pfam PF00563 EAL domain 395 621 1.5E-64 T 11-10-2018 IPR001633 EAL domain AMS64_14345 affb2076295aeeca58b50f173ffb84d1 650 SMART SM00052 386 626 2.9E-90 T 11-10-2018 IPR001633 EAL domain AMS64_14345 affb2076295aeeca58b50f173ffb84d1 650 SUPERFAMILY SSF55073 223 378 2.16E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_14345 affb2076295aeeca58b50f173ffb84d1 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 216 372 1.1E-34 T 11-10-2018 IPR000160 GGDEF domain AMS64_14345 affb2076295aeeca58b50f173ffb84d1 650 SUPERFAMILY SSF141868 393 628 9.29E-76 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_14365 7b72d9792181f933120d505367114a53 339 Pfam PF01212 Beta-eliminating lyase 5 286 1.4E-94 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AMS64_14365 7b72d9792181f933120d505367114a53 339 Gene3D G3DSA:3.90.1150.10 247 338 1.3E-31 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_14365 7b72d9792181f933120d505367114a53 339 SUPERFAMILY SSF53383 3 336 3.59E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_14365 7b72d9792181f933120d505367114a53 339 Gene3D G3DSA:3.40.640.10 1 246 3.9E-98 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_14365 7b72d9792181f933120d505367114a53 339 PIRSF PIRSF017617 1 339 1.1E-132 T 11-10-2018 IPR023603 Threonine aldolase AMS64_18500 29e22a4bed9bd7b5708883c1783a6374 396 Pfam PF14072 DNA-sulfur modification-associated 24 203 2.5E-20 T 11-10-2018 IPR017642 DNA sulphur modification protein DndB AMS64_18500 29e22a4bed9bd7b5708883c1783a6374 396 TIGRFAM TIGR03187 DGQHR: DGQHR domain 16 339 3.9E-61 T 11-10-2018 IPR017601 DGQHR-containing domain AMS64_11000 7bfa73944edb2dcf9f2012e00f180242 467 SMART SM00490 257 338 3.0E-32 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_11000 7bfa73944edb2dcf9f2012e00f180242 467 Pfam PF00270 DEAD/DEAH box helicase 25 194 1.3E-50 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_11000 7bfa73944edb2dcf9f2012e00f180242 467 SMART SM00487 20 221 8.1E-65 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_11000 7bfa73944edb2dcf9f2012e00f180242 467 Pfam PF00271 Helicase conserved C-terminal domain 239 338 1.1E-26 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_11000 7bfa73944edb2dcf9f2012e00f180242 467 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMS64_11000 7bfa73944edb2dcf9f2012e00f180242 467 SUPERFAMILY SSF52540 73 358 2.04E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11000 7bfa73944edb2dcf9f2012e00f180242 467 Gene3D G3DSA:3.40.50.300 1 209 1.2E-79 T 11-10-2018 AMS64_11000 7bfa73944edb2dcf9f2012e00f180242 467 Gene3D G3DSA:3.40.50.300 212 378 4.9E-49 T 11-10-2018 AMS64_05745 70cefac30438ce5e6bbadf7e7fdfa377 267 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 41 161 8.2E-36 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AMS64_05745 70cefac30438ce5e6bbadf7e7fdfa377 267 SUPERFAMILY SSF54534 52 257 7.66E-64 T 11-10-2018 AMS64_05745 70cefac30438ce5e6bbadf7e7fdfa377 267 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 169 255 1.4E-27 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMS64_05745 70cefac30438ce5e6bbadf7e7fdfa377 267 Gene3D G3DSA:1.10.287.460 34 149 6.2E-32 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AMS64_05745 70cefac30438ce5e6bbadf7e7fdfa377 267 Gene3D G3DSA:3.10.50.40 150 256 6.8E-42 T 11-10-2018 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.4E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 9.4E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 9.4E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 9.4E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.4E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 9.4E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 9.4E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.4E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 9.4E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 Gene3D G3DSA:1.20.1640.10 504 1005 0.0 T 11-10-2018 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 Pfam PF00873 AcrB/AcrD/AcrF family 4 1007 1.3E-284 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 SUPERFAMILY SSF82693 554 656 1.39E-17 T 11-10-2018 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 Gene3D G3DSA:3.30.70.1440 656 845 0.0 T 11-10-2018 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 SUPERFAMILY SSF82714 703 787 4.97E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 Gene3D G3DSA:3.30.70.1430 40 800 0.0 T 11-10-2018 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 SUPERFAMILY SSF82866 291 491 3.27E-48 T 11-10-2018 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 Gene3D G3DSA:3.30.70.1320 134 324 0.0 T 11-10-2018 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 Gene3D G3DSA:3.30.70.1430 558 655 0.0 T 11-10-2018 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 Gene3D G3DSA:1.20.1640.10 10 503 0.0 T 11-10-2018 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 SUPERFAMILY SSF82693 139 324 4.97E-21 T 11-10-2018 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 SUPERFAMILY SSF82866 790 1009 3.01E-49 T 11-10-2018 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 Gene3D G3DSA:3.30.2090.10 704 792 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 SUPERFAMILY SSF82693 40 133 3.14E-26 T 11-10-2018 AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 SUPERFAMILY SSF82714 183 265 4.19E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_17345 f5c5458bd165a4537d56f561656c46e2 1038 Gene3D G3DSA:3.30.2090.10 179 271 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_18945 4b0d0c2a5228fa0435a76fdd9e2795ba 348 Gene3D G3DSA:3.40.50.2300 156 288 2.7E-98 T 11-10-2018 AMS64_18945 4b0d0c2a5228fa0435a76fdd9e2795ba 348 SUPERFAMILY SSF53822 52 311 5.07E-31 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_18945 4b0d0c2a5228fa0435a76fdd9e2795ba 348 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 55 347 1.1E-100 T 11-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT AMS64_18945 4b0d0c2a5228fa0435a76fdd9e2795ba 348 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 54 300 1.3E-18 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AMS64_18945 4b0d0c2a5228fa0435a76fdd9e2795ba 348 Gene3D G3DSA:3.40.50.2300 55 323 2.7E-98 T 11-10-2018 AMS64_03865 7cd884f699f7a24d783df659a3ebb5c2 474 Gene3D G3DSA:3.40.50.12780 7 370 3.4E-67 T 11-10-2018 AMS64_03865 7cd884f699f7a24d783df659a3ebb5c2 474 Pfam PF13193 AMP-binding enzyme C-terminal domain 382 441 1.1E-10 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMS64_03865 7cd884f699f7a24d783df659a3ebb5c2 474 Pfam PF00501 AMP-binding enzyme 16 372 1.3E-47 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMS64_03865 7cd884f699f7a24d783df659a3ebb5c2 474 ProSitePatterns PS00455 Putative AMP-binding domain signature. 147 158 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMS64_03865 7cd884f699f7a24d783df659a3ebb5c2 474 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 34 465 3.5E-101 T 11-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 AMS64_03865 7cd884f699f7a24d783df659a3ebb5c2 474 Gene3D G3DSA:3.30.300.30 371 473 1.7E-18 T 11-10-2018 AMS64_03865 7cd884f699f7a24d783df659a3ebb5c2 474 SUPERFAMILY SSF56801 14 463 1.13E-92 T 11-10-2018 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 1.6E-225 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 PIRSF PIRSF000429 1 387 1.3E-131 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 Gene3D G3DSA:3.40.47.10 134 381 6.0E-151 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 Pfam PF00108 Thiolase, N-terminal domain 4 253 1.7E-80 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 SUPERFAMILY SSF53901 262 386 3.68E-43 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 SUPERFAMILY SSF53901 1 258 1.0E-77 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 Gene3D G3DSA:3.40.47.10 4 267 6.0E-151 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 62.705 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 8.4E-141 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMS64_00930 60192ac73538229c34cd72d458bf33a6 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 1.6E-49 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMS64_19165 3ae8e3ff881f7e619c4d0b95bcc8e0f4 191 SUPERFAMILY SSF51206 31 143 2.09E-15 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMS64_19165 3ae8e3ff881f7e619c4d0b95bcc8e0f4 191 Pfam PF00027 Cyclic nucleotide-binding domain 34 113 2.0E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_19165 3ae8e3ff881f7e619c4d0b95bcc8e0f4 191 Gene3D G3DSA:2.60.120.10 11 141 5.8E-16 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_22205 a0f9f9f9ce265b90ac07c3f19a570c26 165 TIGRFAM TIGR03645 glyox_marine: lactoylglutathione lyase family protein 3 163 9.3E-96 T 11-10-2018 IPR019883 Lactoylglutathione lyase AMS64_22205 a0f9f9f9ce265b90ac07c3f19a570c26 165 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 149 1.7E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMS64_22205 a0f9f9f9ce265b90ac07c3f19a570c26 165 Gene3D G3DSA:3.10.180.10 2 152 3.9E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_22205 a0f9f9f9ce265b90ac07c3f19a570c26 165 SUPERFAMILY SSF54593 5 154 4.83E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_20020 37f9d409b9714dee64b145f41be08c7d 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.0E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20020 37f9d409b9714dee64b145f41be08c7d 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.0E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20020 37f9d409b9714dee64b145f41be08c7d 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.0E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20020 37f9d409b9714dee64b145f41be08c7d 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.0E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20020 37f9d409b9714dee64b145f41be08c7d 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20020 37f9d409b9714dee64b145f41be08c7d 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 1.9E-37 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20020 37f9d409b9714dee64b145f41be08c7d 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.004 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20020 37f9d409b9714dee64b145f41be08c7d 76 Gene3D G3DSA:4.10.640.10 1 75 2.8E-28 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20020 37f9d409b9714dee64b145f41be08c7d 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 72 3.0E-22 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20020 37f9d409b9714dee64b145f41be08c7d 76 Pfam PF01084 Ribosomal protein S18 18 68 1.4E-25 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20020 37f9d409b9714dee64b145f41be08c7d 76 SUPERFAMILY SSF46911 3 72 9.81E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_16495 8e95ee6818f66e718de794923f059e55 380 Pfam PF01556 DnaJ C terminal domain 122 334 1.4E-45 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal AMS64_16495 8e95ee6818f66e718de794923f059e55 380 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site AMS64_16495 8e95ee6818f66e718de794923f059e55 380 SUPERFAMILY SSF57938 135 211 7.85E-23 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AMS64_16495 8e95ee6818f66e718de794923f059e55 380 Gene3D G3DSA:1.10.287.110 1 113 5.8E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMS64_16495 8e95ee6818f66e718de794923f059e55 380 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 374 41.886 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMS64_16495 8e95ee6818f66e718de794923f059e55 380 PRINTS PR00625 DnaJ domain signature 25 40 1.2E-29 T 11-10-2018 IPR001623 DnaJ domain AMS64_16495 8e95ee6818f66e718de794923f059e55 380 PRINTS PR00625 DnaJ domain signature 62 81 1.2E-29 T 11-10-2018 IPR001623 DnaJ domain AMS64_16495 8e95ee6818f66e718de794923f059e55 380 PRINTS PR00625 DnaJ domain signature 7 25 1.2E-29 T 11-10-2018 IPR001623 DnaJ domain AMS64_16495 8e95ee6818f66e718de794923f059e55 380 PRINTS PR00625 DnaJ domain signature 42 62 1.2E-29 T 11-10-2018 IPR001623 DnaJ domain AMS64_16495 8e95ee6818f66e718de794923f059e55 380 Gene3D G3DSA:2.60.260.20 257 365 2.9E-28 T 11-10-2018 AMS64_16495 8e95ee6818f66e718de794923f059e55 380 Pfam PF00684 DnaJ central domain 148 208 2.0E-15 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMS64_16495 8e95ee6818f66e718de794923f059e55 380 Gene3D G3DSA:2.10.230.10 140 210 1.6E-26 T 11-10-2018 AMS64_16495 8e95ee6818f66e718de794923f059e55 380 Pfam PF00226 DnaJ domain 5 67 8.4E-27 T 11-10-2018 IPR001623 DnaJ domain AMS64_16495 8e95ee6818f66e718de794923f059e55 380 SUPERFAMILY SSF49493 114 261 1.83E-20 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMS64_16495 8e95ee6818f66e718de794923f059e55 380 SMART SM00271 4 62 2.5E-30 T 11-10-2018 IPR001623 DnaJ domain AMS64_16495 8e95ee6818f66e718de794923f059e55 380 SUPERFAMILY SSF49493 260 345 5.89E-22 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMS64_16495 8e95ee6818f66e718de794923f059e55 380 SUPERFAMILY SSF46565 1 109 7.85E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMS64_16495 8e95ee6818f66e718de794923f059e55 380 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 2.1E-139 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMS64_17730 8c8a9274542d44e314854e91f047d299 300 SMART SM00267 133 299 1.2E-41 T 11-10-2018 IPR000160 GGDEF domain AMS64_17730 8c8a9274542d44e314854e91f047d299 300 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 296 1.0E-34 T 11-10-2018 IPR000160 GGDEF domain AMS64_17730 8c8a9274542d44e314854e91f047d299 300 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 295 4.5E-39 T 11-10-2018 IPR000160 GGDEF domain AMS64_17730 8c8a9274542d44e314854e91f047d299 300 Gene3D G3DSA:3.30.70.270 135 298 7.8E-44 T 11-10-2018 AMS64_17730 8c8a9274542d44e314854e91f047d299 300 SUPERFAMILY SSF55073 149 295 1.1E-38 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_20895 492e02aa209ba6decd83e8993249cbef 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.3E-102 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AMS64_20895 492e02aa209ba6decd83e8993249cbef 296 Gene3D G3DSA:3.20.20.220 1 296 2.0E-111 T 11-10-2018 AMS64_20895 492e02aa209ba6decd83e8993249cbef 296 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 3.2E-103 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AMS64_20895 492e02aa209ba6decd83e8993249cbef 296 SUPERFAMILY SSF51730 22 294 1.59E-95 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AMS64_17535 c4705c67f745834477d179cc8669de90 229 Gene3D G3DSA:1.10.10.10 128 229 2.6E-41 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_17535 c4705c67f745834477d179cc8669de90 229 SUPERFAMILY SSF52172 3 125 1.42E-43 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_17535 c4705c67f745834477d179cc8669de90 229 SUPERFAMILY SSF46894 129 226 4.54E-32 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_17535 c4705c67f745834477d179cc8669de90 229 Pfam PF00072 Response regulator receiver domain 5 116 5.1E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_17535 c4705c67f745834477d179cc8669de90 229 SMART SM00448 3 116 3.8E-47 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_17535 c4705c67f745834477d179cc8669de90 229 SMART SM00862 150 225 1.4E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_17535 c4705c67f745834477d179cc8669de90 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 1.0E-111 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AMS64_17535 c4705c67f745834477d179cc8669de90 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.0E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_17535 c4705c67f745834477d179cc8669de90 229 Gene3D G3DSA:3.40.50.2300 1 127 3.2E-40 T 11-10-2018 AMS64_19035 aa55626d9514afbd023e0cd1792a3eaa 292 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 290 1.1E-97 T 11-10-2018 AMS64_19035 aa55626d9514afbd023e0cd1792a3eaa 292 SUPERFAMILY SSF53335 46 283 1.96E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_19035 aa55626d9514afbd023e0cd1792a3eaa 292 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 290 32.572 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMS64_19035 aa55626d9514afbd023e0cd1792a3eaa 292 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 284 5.2E-101 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMS64_19035 aa55626d9514afbd023e0cd1792a3eaa 292 Gene3D G3DSA:3.40.50.150 99 291 5.1E-59 T 11-10-2018 AMS64_19035 aa55626d9514afbd023e0cd1792a3eaa 292 PIRSF PIRSF000401 1 292 4.0E-93 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 SUPERFAMILY SSF55073 518 672 2.17E-54 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 Gene3D G3DSA:1.20.120.50 679 811 3.5E-22 T 11-10-2018 IPR035938 Hemerythrin-like superfamily AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 Gene3D G3DSA:3.40.190.10 117 213 7.5E-61 T 11-10-2018 AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 Gene3D G3DSA:3.30.70.270 508 678 5.9E-66 T 11-10-2018 AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 683 806 1.1E-23 T 11-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 SMART SM00091 380 447 1.8E-6 T 11-10-2018 IPR000014 PAS domain AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 Pfam PF00989 PAS fold 380 499 1.5E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 Pfam PF09084 NMT1/THI5 like 47 251 1.1E-42 T 11-10-2018 IPR015168 SsuA/THI5-like AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 Gene3D G3DSA:3.40.190.10 39 300 7.5E-61 T 11-10-2018 AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 SUPERFAMILY SSF47188 680 805 6.41E-22 T 11-10-2018 IPR035938 Hemerythrin-like superfamily AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 Gene3D G3DSA:3.30.450.20 366 500 3.9E-19 T 11-10-2018 AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 Pfam PF00990 Diguanylate cyclase, GGDEF domain 513 665 2.4E-55 T 11-10-2018 IPR000160 GGDEF domain AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 377 508 6.1E-17 T 11-10-2018 IPR000014 PAS domain AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 511 668 1.3E-46 T 11-10-2018 IPR000160 GGDEF domain AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 SUPERFAMILY SSF53850 39 260 5.85E-28 T 11-10-2018 AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 Pfam PF01814 Hemerythrin HHE cation binding domain 693 806 4.3E-7 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 SUPERFAMILY SSF55785 367 500 1.21E-16 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 SMART SM00267 502 670 4.3E-73 T 11-10-2018 IPR000160 GGDEF domain AMS64_16400 1264af7a414fe7528f9256f6d0db5217 820 ProSitePatterns PS00550 Hemerythrin family signature. 736 759 - T 11-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 AMS64_06495 2627e28079714ceface496d46ef3955d 132 Gene3D G3DSA:1.20.1300.10 5 132 1.1E-50 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06495 2627e28079714ceface496d46ef3955d 132 PIRSF PIRSF000180 5 132 2.2E-40 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AMS64_06495 2627e28079714ceface496d46ef3955d 132 SUPERFAMILY SSF81343 6 131 4.58E-43 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06495 2627e28079714ceface496d46ef3955d 132 Pfam PF02300 Fumarate reductase subunit C 6 131 2.0E-50 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AMS64_06495 2627e28079714ceface496d46ef3955d 132 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 109 3.0E-18 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AMS64_10200 5e5ce806e7639b035559e0f658207577 370 Gene3D G3DSA:3.40.50.720 4 357 1.8E-145 T 11-10-2018 AMS64_10200 5e5ce806e7639b035559e0f658207577 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 122 1.5E-23 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMS64_10200 5e5ce806e7639b035559e0f658207577 370 SUPERFAMILY SSF55347 134 355 3.74E-77 T 11-10-2018 AMS64_10200 5e5ce806e7639b035559e0f658207577 370 SUPERFAMILY SSF51735 1 147 8.6E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_10200 5e5ce806e7639b035559e0f658207577 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_10200 5e5ce806e7639b035559e0f658207577 370 SMART SM00859 3 122 8.9E-28 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMS64_10200 5e5ce806e7639b035559e0f658207577 370 PIRSF PIRSF000148 1 370 5.3E-68 T 11-10-2018 AMS64_10200 5e5ce806e7639b035559e0f658207577 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.2 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_10200 5e5ce806e7639b035559e0f658207577 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 354 6.1E-59 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMS64_10200 5e5ce806e7639b035559e0f658207577 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 4.9E-204 T 11-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_10200 5e5ce806e7639b035559e0f658207577 370 Gene3D G3DSA:3.30.360.10 135 351 1.8E-145 T 11-10-2018 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 TIGRFAM TIGR01391 dnaG: DNA primase 4 418 3.6E-145 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 Hamap MF_00974 DNA primase [dnaG]. 4 583 29.229 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 Gene3D G3DSA:1.10.860.10 438 587 2.3E-31 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 Pfam PF01807 CHC2 zinc finger 6 101 2.0E-40 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 Pfam PF08278 DNA primase DnaG DnaB-binding 454 581 1.3E-25 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 Gene3D G3DSA:3.40.1360.10 241 367 1.5E-41 T 11-10-2018 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 SUPERFAMILY SSF57783 4 100 4.42E-37 T 11-10-2018 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 Gene3D G3DSA:3.90.580.10 1 102 1.6E-39 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 Gene3D G3DSA:3.90.980.10 116 240 1.1E-43 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 SUPERFAMILY SSF117023 449 584 3.66E-32 T 11-10-2018 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 SMART SM00766 452 582 4.6E-25 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 SUPERFAMILY SSF56731 117 424 9.59E-106 T 11-10-2018 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 251 7.8E-40 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 PIRSF PIRSF002811 2 593 3.2E-141 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 SMART SM00493 259 330 3.4E-14 T 11-10-2018 IPR006171 TOPRIM domain AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 Pfam PF10410 DnaB-helicase binding domain of primase 370 423 5.7E-8 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 SMART SM00400 36 90 9.9E-37 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMS64_19825 2ecc4f72e2139375217facfa1656517e 595 Pfam PF13662 Toprim domain 260 325 2.6E-13 T 11-10-2018 IPR006171 TOPRIM domain AMS64_09395 be30d7c496b519e73441026d54b95b5d 509 Pfam PF00005 ABC transporter 27 175 6.6E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_09395 be30d7c496b519e73441026d54b95b5d 509 SUPERFAMILY SSF52540 272 487 3.48E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09395 be30d7c496b519e73441026d54b95b5d 509 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_09395 be30d7c496b519e73441026d54b95b5d 509 Gene3D G3DSA:3.40.50.300 261 509 2.5E-48 T 11-10-2018 AMS64_09395 be30d7c496b519e73441026d54b95b5d 509 SMART SM00382 283 477 3.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_09395 be30d7c496b519e73441026d54b95b5d 509 SMART SM00382 35 224 4.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_09395 be30d7c496b519e73441026d54b95b5d 509 Gene3D G3DSA:3.40.50.300 2 254 5.4E-59 T 11-10-2018 AMS64_09395 be30d7c496b519e73441026d54b95b5d 509 SUPERFAMILY SSF52540 9 235 1.17E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09395 be30d7c496b519e73441026d54b95b5d 509 Pfam PF00005 ABC transporter 275 428 8.1E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_00595 ba2d89fb2b87d0cc05117eb52eec6835 257 SUPERFAMILY SSF100950 76 233 1.3E-31 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AMS64_00595 ba2d89fb2b87d0cc05117eb52eec6835 257 Gene3D G3DSA:1.10.10.10 5 100 4.0E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_00595 ba2d89fb2b87d0cc05117eb52eec6835 257 SUPERFAMILY SSF46785 7 66 1.21E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_00595 ba2d89fb2b87d0cc05117eb52eec6835 257 Pfam PF08220 DeoR-like helix-turn-helix domain 9 60 3.5E-15 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_00595 ba2d89fb2b87d0cc05117eb52eec6835 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 1.7E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_00595 ba2d89fb2b87d0cc05117eb52eec6835 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 1.7E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_00595 ba2d89fb2b87d0cc05117eb52eec6835 257 Pfam PF00455 DeoR C terminal sensor domain 77 233 1.1E-43 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AMS64_00595 ba2d89fb2b87d0cc05117eb52eec6835 257 SMART SM01134 73 234 1.3E-61 T 11-10-2018 AMS64_00595 ba2d89fb2b87d0cc05117eb52eec6835 257 SMART SM00420 9 61 9.4E-15 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_00595 ba2d89fb2b87d0cc05117eb52eec6835 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMS64_08470 dba44ff2f031307f87500e4c6a4b2925 226 Gene3D G3DSA:3.40.50.1000 8 218 2.3E-55 T 11-10-2018 IPR023214 HAD superfamily AMS64_08470 dba44ff2f031307f87500e4c6a4b2925 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 192 1.2E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_08470 dba44ff2f031307f87500e4c6a4b2925 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 109 122 5.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_08470 dba44ff2f031307f87500e4c6a4b2925 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 5.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_08470 dba44ff2f031307f87500e4c6a4b2925 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 5.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_08470 dba44ff2f031307f87500e4c6a4b2925 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 5.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_08470 dba44ff2f031307f87500e4c6a4b2925 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 198 6.4E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_08470 dba44ff2f031307f87500e4c6a4b2925 226 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 6 222 1.2E-52 T 11-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 AMS64_08470 dba44ff2f031307f87500e4c6a4b2925 226 SUPERFAMILY SSF56784 6 223 2.76E-44 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_08470 dba44ff2f031307f87500e4c6a4b2925 226 Gene3D G3DSA:1.10.150.240 19 98 2.3E-55 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMS64_08470 dba44ff2f031307f87500e4c6a4b2925 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 197 6.0E-20 T 11-10-2018 AMS64_09975 adecef423e8c88cb8d4495c9a1b9c720 416 Gene3D G3DSA:1.10.3860.10 7 407 2.5E-68 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_09975 adecef423e8c88cb8d4495c9a1b9c720 416 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 8.1E-15 T 11-10-2018 AMS64_09975 adecef423e8c88cb8d4495c9a1b9c720 416 PRINTS PR00173 Glutamate-aspartate symporter signature 186 205 8.1E-15 T 11-10-2018 AMS64_09975 adecef423e8c88cb8d4495c9a1b9c720 416 PRINTS PR00173 Glutamate-aspartate symporter signature 288 314 8.1E-15 T 11-10-2018 AMS64_09975 adecef423e8c88cb8d4495c9a1b9c720 416 PRINTS PR00173 Glutamate-aspartate symporter signature 323 342 8.1E-15 T 11-10-2018 AMS64_09975 adecef423e8c88cb8d4495c9a1b9c720 416 PRINTS PR00173 Glutamate-aspartate symporter signature 42 67 8.1E-15 T 11-10-2018 AMS64_09975 adecef423e8c88cb8d4495c9a1b9c720 416 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 4 405 36.683 T 11-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AMS64_09975 adecef423e8c88cb8d4495c9a1b9c720 416 Pfam PF00375 Sodium:dicarboxylate symporter family 16 395 1.2E-61 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMS64_09975 adecef423e8c88cb8d4495c9a1b9c720 416 SUPERFAMILY SSF118215 16 397 2.62E-95 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_22115 5599bef0482094bdc3f6f2f5c63e60f4 87 Pfam PF10963 Phage tail assembly chaperone 6 87 1.5E-34 T 11-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 AMS64_22115 5599bef0482094bdc3f6f2f5c63e60f4 87 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 6 86 9.0E-23 T 11-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 AMS64_15525 5599bef0482094bdc3f6f2f5c63e60f4 87 Pfam PF10963 Phage tail assembly chaperone 6 87 1.5E-34 T 11-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 AMS64_15525 5599bef0482094bdc3f6f2f5c63e60f4 87 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 6 86 9.0E-23 T 11-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 AMS64_11515 4036e5c2558d59a7019d5bc3d1a2a083 419 Pfam PF08245 Mur ligase middle domain 54 190 3.4E-6 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMS64_11515 4036e5c2558d59a7019d5bc3d1a2a083 419 Pfam PF02875 Mur ligase family, glutamate ligase domain 286 337 7.6E-6 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMS64_11515 4036e5c2558d59a7019d5bc3d1a2a083 419 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 2.0E-99 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AMS64_11515 4036e5c2558d59a7019d5bc3d1a2a083 419 SUPERFAMILY SSF53623 11 284 3.53E-87 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMS64_11515 4036e5c2558d59a7019d5bc3d1a2a083 419 Gene3D G3DSA:3.40.1190.10 1 286 9.0E-92 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMS64_11515 4036e5c2558d59a7019d5bc3d1a2a083 419 SUPERFAMILY SSF53244 286 416 6.78E-29 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMS64_11515 4036e5c2558d59a7019d5bc3d1a2a083 419 Gene3D G3DSA:3.90.190.20 287 418 9.1E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMS64_11515 4036e5c2558d59a7019d5bc3d1a2a083 419 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AMS64_11515 4036e5c2558d59a7019d5bc3d1a2a083 419 PIRSF PIRSF001563 5 419 6.3E-105 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AMS64_12355 636136a3faebbf3187cc1b2efd258ef3 587 Gene3D G3DSA:3.40.50.300 329 581 1.1E-96 T 11-10-2018 AMS64_12355 636136a3faebbf3187cc1b2efd258ef3 587 Gene3D G3DSA:1.20.1560.10 1 328 6.8E-82 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_12355 636136a3faebbf3187cc1b2efd258ef3 587 SMART SM00382 368 555 4.7E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_12355 636136a3faebbf3187cc1b2efd258ef3 587 SUPERFAMILY SSF90123 11 327 3.79E-74 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_12355 636136a3faebbf3187cc1b2efd258ef3 587 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_12355 636136a3faebbf3187cc1b2efd258ef3 587 Pfam PF00664 ABC transporter transmembrane region 38 297 2.2E-53 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMS64_12355 636136a3faebbf3187cc1b2efd258ef3 587 SUPERFAMILY SSF52540 332 579 3.15E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_12355 636136a3faebbf3187cc1b2efd258ef3 587 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 13 581 3.3E-239 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AMS64_12355 636136a3faebbf3187cc1b2efd258ef3 587 Pfam PF00005 ABC transporter 359 509 9.1E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_12550 fd52d56ab97106a0c567e1b48eacb2f2 338 Pfam PF00849 RNA pseudouridylate synthase 69 195 1.4E-14 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_12550 fd52d56ab97106a0c567e1b48eacb2f2 338 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 1.0E-53 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMS64_12550 fd52d56ab97106a0c567e1b48eacb2f2 338 Gene3D G3DSA:3.30.70.1560 134 207 7.6E-57 T 11-10-2018 AMS64_12550 fd52d56ab97106a0c567e1b48eacb2f2 338 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMS64_12550 fd52d56ab97106a0c567e1b48eacb2f2 338 Gene3D G3DSA:3.30.70.580 70 229 7.6E-57 T 11-10-2018 AMS64_12550 fd52d56ab97106a0c567e1b48eacb2f2 338 Gene3D G3DSA:3.10.290.10 1 62 5.5E-24 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMS64_12550 fd52d56ab97106a0c567e1b48eacb2f2 338 SUPERFAMILY SSF55174 7 62 3.97E-14 T 11-10-2018 AMS64_12550 fd52d56ab97106a0c567e1b48eacb2f2 338 SMART SM00363 7 63 9.6E-14 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_12550 fd52d56ab97106a0c567e1b48eacb2f2 338 Pfam PF01479 S4 domain 7 52 1.7E-13 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_12550 fd52d56ab97106a0c567e1b48eacb2f2 338 SUPERFAMILY SSF55120 69 229 4.32E-38 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_17610 33c969f231e1389baf617f3f27730c34 130 Gene3D G3DSA:3.30.1150.10 37 128 8.2E-10 T 11-10-2018 AMS64_17610 33c969f231e1389baf617f3f27730c34 130 SUPERFAMILY SSF74653 63 123 3.79E-10 T 11-10-2018 AMS64_17610 33c969f231e1389baf617f3f27730c34 130 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 64 126 9.6E-11 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMS64_17610 33c969f231e1389baf617f3f27730c34 130 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 61 127 1.7E-7 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AMS64_09330 c179251ca13d2acacdf8b4badddcc2a2 327 SUPERFAMILY SSF55681 92 327 1.18E-82 T 11-10-2018 AMS64_09330 c179251ca13d2acacdf8b4badddcc2a2 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 327 2.8E-115 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AMS64_09330 c179251ca13d2acacdf8b4badddcc2a2 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.492 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AMS64_09330 c179251ca13d2acacdf8b4badddcc2a2 327 SUPERFAMILY SSF46589 14 99 4.45E-23 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AMS64_09330 c179251ca13d2acacdf8b4badddcc2a2 327 Gene3D G3DSA:3.30.930.10 8 327 8.9E-125 T 11-10-2018 AMS64_09330 c179251ca13d2acacdf8b4badddcc2a2 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 5.9E-107 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AMS64_09330 c179251ca13d2acacdf8b4badddcc2a2 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.5E-26 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMS64_05165 394dd0ce445d57b705937e186b3849dc 317 Gene3D G3DSA:3.40.190.10 90 305 3.2E-55 T 11-10-2018 AMS64_05165 394dd0ce445d57b705937e186b3849dc 317 Gene3D G3DSA:1.10.10.10 1 89 2.0E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_05165 394dd0ce445d57b705937e186b3849dc 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 4.4E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_05165 394dd0ce445d57b705937e186b3849dc 317 SUPERFAMILY SSF46785 2 84 1.03E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_05165 394dd0ce445d57b705937e186b3849dc 317 Pfam PF03466 LysR substrate binding domain 95 313 2.5E-22 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_05165 394dd0ce445d57b705937e186b3849dc 317 SUPERFAMILY SSF53850 90 313 1.59E-34 T 11-10-2018 AMS64_05165 394dd0ce445d57b705937e186b3849dc 317 Gene3D G3DSA:3.40.190.10 173 285 3.2E-55 T 11-10-2018 AMS64_05165 394dd0ce445d57b705937e186b3849dc 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_05165 394dd0ce445d57b705937e186b3849dc 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_05165 394dd0ce445d57b705937e186b3849dc 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_14940 314499a405b47c4628d06b32c37d430d 511 SMART SM00382 34 176 2.9E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_14940 314499a405b47c4628d06b32c37d430d 511 SUPERFAMILY SSF52540 8 264 3.22E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_14940 314499a405b47c4628d06b32c37d430d 511 Gene3D G3DSA:3.40.50.300 1 216 3.4E-52 T 11-10-2018 AMS64_14940 314499a405b47c4628d06b32c37d430d 511 Pfam PF07728 AAA domain (dynein-related subfamily) 38 166 7.0E-22 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMS64_14940 314499a405b47c4628d06b32c37d430d 511 Gene3D G3DSA:1.10.8.300 217 282 9.4E-21 T 11-10-2018 AMS64_01450 47a2e6289429fad06107dfff59b66a32 170 Gene3D G3DSA:2.60.120.10 9 150 1.2E-29 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_01450 47a2e6289429fad06107dfff59b66a32 170 SUPERFAMILY SSF51182 31 163 2.01E-21 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_01450 47a2e6289429fad06107dfff59b66a32 170 Pfam PF07883 Cupin domain 48 118 2.5E-17 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AMS64_05480 523d9c40fa48cc06e2ee82bcb6be78e1 307 SUPERFAMILY SSF51306 78 305 3.14E-74 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMS64_05480 523d9c40fa48cc06e2ee82bcb6be78e1 307 Gene3D G3DSA:2.170.230.10 155 239 1.0E-77 T 11-10-2018 AMS64_05480 523d9c40fa48cc06e2ee82bcb6be78e1 307 Gene3D G3DSA:2.10.109.10 78 280 1.0E-77 T 11-10-2018 AMS64_05480 523d9c40fa48cc06e2ee82bcb6be78e1 307 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AMS64_05480 523d9c40fa48cc06e2ee82bcb6be78e1 307 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 67 280 2.3E-47 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMS64_05480 523d9c40fa48cc06e2ee82bcb6be78e1 307 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AMS64_05480 523d9c40fa48cc06e2ee82bcb6be78e1 307 Pfam PF00717 Peptidase S24-like 86 166 1.5E-21 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMS64_05480 523d9c40fa48cc06e2ee82bcb6be78e1 307 Pfam PF10502 Signal peptidase, peptidase S26 237 277 1.7E-6 T 11-10-2018 IPR019533 Peptidase S26 AMS64_05480 523d9c40fa48cc06e2ee82bcb6be78e1 307 ProSitePatterns PS00761 Signal peptidases I signature 3. 245 258 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AMS64_05480 523d9c40fa48cc06e2ee82bcb6be78e1 307 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 1.3E-26 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMS64_05480 523d9c40fa48cc06e2ee82bcb6be78e1 307 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 1.3E-26 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMS64_05480 523d9c40fa48cc06e2ee82bcb6be78e1 307 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 240 259 1.3E-26 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMS64_04820 621147da5a8e28d1c24c2cf1fcd19751 488 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 230 291 2.6E-22 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AMS64_04820 621147da5a8e28d1c24c2cf1fcd19751 488 SUPERFAMILY SSF81301 44 200 1.04E-39 T 11-10-2018 AMS64_04820 621147da5a8e28d1c24c2cf1fcd19751 488 SUPERFAMILY SSF81891 202 435 6.93E-48 T 11-10-2018 AMS64_04820 621147da5a8e28d1c24c2cf1fcd19751 488 Pfam PF01743 Poly A polymerase head domain 72 202 3.2E-37 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AMS64_04820 621147da5a8e28d1c24c2cf1fcd19751 488 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 29 483 37.867 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AMS64_04820 621147da5a8e28d1c24c2cf1fcd19751 488 Gene3D G3DSA:3.30.460.10 39 199 2.7E-61 T 11-10-2018 AMS64_04820 621147da5a8e28d1c24c2cf1fcd19751 488 Pfam PF12626 Polymerase A arginine-rich C-terminus 348 482 2.7E-40 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AMS64_04820 621147da5a8e28d1c24c2cf1fcd19751 488 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 43 472 6.4E-159 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AMS64_04820 621147da5a8e28d1c24c2cf1fcd19751 488 Gene3D G3DSA:1.10.3090.10 202 449 1.2E-92 T 11-10-2018 AMS64_16870 3e99a1253d75aa474aa8598054303092 293 Gene3D G3DSA:1.10.150.650 98 169 7.2E-83 T 11-10-2018 AMS64_16870 3e99a1253d75aa474aa8598054303092 293 SUPERFAMILY SSF89550 1 267 4.05E-52 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMS64_16870 3e99a1253d75aa474aa8598054303092 293 Gene3D G3DSA:3.20.20.140 4 250 7.2E-83 T 11-10-2018 AMS64_16870 3e99a1253d75aa474aa8598054303092 293 SMART SM00481 3 70 3.0E-20 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMS64_16870 3e99a1253d75aa474aa8598054303092 293 Pfam PF02811 PHP domain 4 183 2.0E-8 T 11-10-2018 IPR004013 PHP domain GO:0003824 AMS64_11115 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 Gene3D G3DSA:3.40.50.2020 278 442 5.8E-159 T 11-10-2018 AMS64_11115 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 Gene3D G3DSA:3.60.20.10 2 413 5.8E-159 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_11115 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 Pfam PF13522 Glutamine amidotransferase domain 64 201 4.4E-16 T 11-10-2018 AMS64_11115 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 465 44.994 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AMS64_11115 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 Pfam PF00156 Phosphoribosyl transferase domain 280 393 1.6E-8 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMS64_11115 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 PIRSF PIRSF000485 1 482 9.4E-167 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AMS64_11115 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 SUPERFAMILY SSF56235 2 258 4.46E-73 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_11115 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 465 6.0E-162 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AMS64_11115 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 SUPERFAMILY SSF53271 252 484 2.1E-71 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMS64_06320 0f8a93f5c922a2a7a29324a8d526e3ff 387 SUPERFAMILY SSF51905 4 378 1.51E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_06320 0f8a93f5c922a2a7a29324a8d526e3ff 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 7.0E-20 T 11-10-2018 AMS64_06320 0f8a93f5c922a2a7a29324a8d526e3ff 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 7.0E-20 T 11-10-2018 AMS64_06320 0f8a93f5c922a2a7a29324a8d526e3ff 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 7.0E-20 T 11-10-2018 AMS64_06320 0f8a93f5c922a2a7a29324a8d526e3ff 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 7.0E-20 T 11-10-2018 AMS64_06320 0f8a93f5c922a2a7a29324a8d526e3ff 387 Pfam PF01494 FAD binding domain 4 335 4.6E-34 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AMS64_06320 0f8a93f5c922a2a7a29324a8d526e3ff 387 Gene3D G3DSA:3.50.50.60 2 250 8.0E-66 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_06320 0f8a93f5c922a2a7a29324a8d526e3ff 387 Gene3D G3DSA:3.50.50.60 251 387 1.9E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_06320 0f8a93f5c922a2a7a29324a8d526e3ff 387 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 385 4.5E-114 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AMS64_00425 0a46b3fc674aa1862ee0608f96adc493 367 Gene3D G3DSA:3.10.150.10 125 248 3.4E-35 T 11-10-2018 AMS64_00425 0a46b3fc674aa1862ee0608f96adc493 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 244 4.0E-34 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMS64_00425 0a46b3fc674aa1862ee0608f96adc493 367 SUPERFAMILY SSF55979 1 118 4.83E-28 T 11-10-2018 AMS64_00425 0a46b3fc674aa1862ee0608f96adc493 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 5.2E-107 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMS64_00425 0a46b3fc674aa1862ee0608f96adc493 367 SUPERFAMILY SSF55979 127 245 4.28E-27 T 11-10-2018 AMS64_00425 0a46b3fc674aa1862ee0608f96adc493 367 Gene3D G3DSA:3.10.150.10 1 123 2.3E-40 T 11-10-2018 AMS64_00425 0a46b3fc674aa1862ee0608f96adc493 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 366 8.1E-41 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMS64_00425 0a46b3fc674aa1862ee0608f96adc493 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.1E-35 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMS64_00425 0a46b3fc674aa1862ee0608f96adc493 367 SUPERFAMILY SSF55979 246 367 9.95E-38 T 11-10-2018 AMS64_00425 0a46b3fc674aa1862ee0608f96adc493 367 PIRSF PIRSF000804 1 367 2.4E-113 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMS64_00425 0a46b3fc674aa1862ee0608f96adc493 367 Gene3D G3DSA:3.10.150.10 249 367 3.6E-40 T 11-10-2018 AMS64_00425 0a46b3fc674aa1862ee0608f96adc493 367 SMART SM00480 17 363 3.7E-144 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMS64_15295 76b4b80ccb075d275dff82bf184dca47 690 SUPERFAMILY SSF52540 17 665 1.46E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_15295 76b4b80ccb075d275dff82bf184dca47 690 Pfam PF06733 DEAD_2 195 266 1.9E-5 T 11-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AMS64_15295 76b4b80ccb075d275dff82bf184dca47 690 Gene3D G3DSA:3.40.50.300 25 318 4.8E-40 T 11-10-2018 AMS64_15295 76b4b80ccb075d275dff82bf184dca47 690 SMART SM00491 539 671 2.4E-29 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMS64_15295 76b4b80ccb075d275dff82bf184dca47 690 Pfam PF13307 Helicase C-terminal domain 530 684 2.7E-32 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMS64_15295 76b4b80ccb075d275dff82bf184dca47 690 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.137 T 11-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 AMS64_15295 76b4b80ccb075d275dff82bf184dca47 690 Gene3D G3DSA:3.40.50.300 504 687 2.4E-31 T 11-10-2018 AMS64_08165 cc2e0ca06efe75dc09c17b14e69aaf9b 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 1.2E-34 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMS64_08165 cc2e0ca06efe75dc09c17b14e69aaf9b 144 Pfam PF00085 Thioredoxin 44 139 2.5E-29 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMS64_08165 cc2e0ca06efe75dc09c17b14e69aaf9b 144 Gene3D G3DSA:2.20.28.140 2 37 1.9E-13 T 11-10-2018 AMS64_08165 cc2e0ca06efe75dc09c17b14e69aaf9b 144 SUPERFAMILY SSF52833 28 141 5.28E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_08165 cc2e0ca06efe75dc09c17b14e69aaf9b 144 ProSitePatterns PS00194 Thioredoxin family active site. 59 77 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMS64_08165 cc2e0ca06efe75dc09c17b14e69aaf9b 144 PRINTS PR00421 Thioredoxin family signature 106 117 6.8E-8 T 11-10-2018 AMS64_08165 cc2e0ca06efe75dc09c17b14e69aaf9b 144 PRINTS PR00421 Thioredoxin family signature 66 75 6.8E-8 T 11-10-2018 AMS64_08165 cc2e0ca06efe75dc09c17b14e69aaf9b 144 PRINTS PR00421 Thioredoxin family signature 58 66 6.8E-8 T 11-10-2018 AMS64_08165 cc2e0ca06efe75dc09c17b14e69aaf9b 144 PIRSF PIRSF000077 15 44 500.0 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMS64_08165 cc2e0ca06efe75dc09c17b14e69aaf9b 144 PIRSF PIRSF000077 37 142 2.3E-32 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMS64_08165 cc2e0ca06efe75dc09c17b14e69aaf9b 144 Gene3D G3DSA:3.40.30.10 43 143 1.2E-32 T 11-10-2018 AMS64_13845 533ba424fb3fa38dfb67dbb5ed848f1d 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 22 439 3.9E-197 T 11-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_13845 533ba424fb3fa38dfb67dbb5ed848f1d 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_13845 533ba424fb3fa38dfb67dbb5ed848f1d 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 12 439 3.7E-170 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_13845 533ba424fb3fa38dfb67dbb5ed848f1d 440 SMART SM00382 162 344 6.8E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_13845 533ba424fb3fa38dfb67dbb5ed848f1d 440 Gene3D G3DSA:3.40.50.12240 18 440 2.1E-150 T 11-10-2018 AMS64_13845 533ba424fb3fa38dfb67dbb5ed848f1d 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 93 9.1E-10 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_13845 533ba424fb3fa38dfb67dbb5ed848f1d 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 8.1E-78 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_13845 533ba424fb3fa38dfb67dbb5ed848f1d 440 SUPERFAMILY SSF52540 96 365 2.17E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_03915 621f88416a6102c64a11dbaf14981867 459 SMART SM00487 23 220 3.2E-51 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_03915 621f88416a6102c64a11dbaf14981867 459 SUPERFAMILY SSF52540 73 358 1.35E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_03915 621f88416a6102c64a11dbaf14981867 459 SMART SM00490 256 337 1.4E-27 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_03915 621f88416a6102c64a11dbaf14981867 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMS64_03915 621f88416a6102c64a11dbaf14981867 459 Gene3D G3DSA:3.30.70.330 388 458 7.5E-22 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMS64_03915 621f88416a6102c64a11dbaf14981867 459 Pfam PF00270 DEAD/DEAH box helicase 28 192 1.4E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_03915 621f88416a6102c64a11dbaf14981867 459 Gene3D G3DSA:3.40.50.300 215 387 5.3E-46 T 11-10-2018 AMS64_03915 621f88416a6102c64a11dbaf14981867 459 Pfam PF03880 DbpA RNA binding domain 386 456 2.8E-23 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AMS64_03915 621f88416a6102c64a11dbaf14981867 459 Pfam PF00271 Helicase conserved C-terminal domain 231 337 3.3E-26 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_03915 621f88416a6102c64a11dbaf14981867 459 Gene3D G3DSA:3.40.50.300 4 210 9.8E-72 T 11-10-2018 AMS64_02065 ddc5a89c6de6f65618ebfab94d181e55 118 Gene3D G3DSA:4.10.910.10 72 118 7.2E-26 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02065 ddc5a89c6de6f65618ebfab94d181e55 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.7E-32 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02065 ddc5a89c6de6f65618ebfab94d181e55 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.897 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02065 ddc5a89c6de6f65618ebfab94d181e55 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.0E-53 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_02065 ddc5a89c6de6f65618ebfab94d181e55 118 PIRSF PIRSF002134 1 118 4.7E-42 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02065 ddc5a89c6de6f65618ebfab94d181e55 118 Gene3D G3DSA:1.10.8.50 1 71 3.9E-27 T 11-10-2018 AMS64_02065 ddc5a89c6de6f65618ebfab94d181e55 118 SUPERFAMILY SSF46946 2 114 2.5E-46 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMS64_02065 ddc5a89c6de6f65618ebfab94d181e55 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 SUPERFAMILY SSF52317 8 241 3.48E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 Pfam PF02540 NAD synthase 227 292 6.5E-7 T 11-10-2018 IPR022310 NAD/GMP synthase AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 209 1.7E-81 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 Pfam PF00958 GMP synthase C terminal domain 437 528 7.1E-44 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 SUPERFAMILY SSF54810 409 529 1.44E-51 T 11-10-2018 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 Gene3D G3DSA:3.30.300.10 410 529 1.3E-51 T 11-10-2018 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 Gene3D G3DSA:3.40.50.620 213 409 1.8E-75 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 SUPERFAMILY SSF52402 201 424 1.7E-59 T 11-10-2018 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00097 Anthranilate synthase component II signature 81 92 4.5E-6 T 11-10-2018 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00097 Anthranilate synthase component II signature 181 194 4.5E-6 T 11-10-2018 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00097 Anthranilate synthase component II signature 54 63 4.5E-6 T 11-10-2018 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 Gene3D G3DSA:3.40.50.880 9 210 1.3E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 529 56.81 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.7E-6 T 11-10-2018 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.7E-6 T 11-10-2018 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.7E-6 T 11-10-2018 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 Pfam PF00117 Glutamine amidotransferase class-I 12 203 2.0E-40 T 11-10-2018 IPR017926 Glutamine amidotransferase AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.4E-7 T 11-10-2018 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 181 194 1.4E-7 T 11-10-2018 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.4E-7 T 11-10-2018 AMS64_10950 8166eb2d9729a04684571e59e83f6788 529 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 217 529 1.4E-157 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AMS64_15360 5143b1b8d20cc0a96c97d1adbbc969d4 266 Gene3D G3DSA:3.40.190.10 121 218 1.9E-77 T 11-10-2018 AMS64_15360 5143b1b8d20cc0a96c97d1adbbc969d4 266 SMART SM00079 36 258 1.0E-4 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AMS64_15360 5143b1b8d20cc0a96c97d1adbbc969d4 266 SUPERFAMILY SSF53850 6 258 2.12E-74 T 11-10-2018 AMS64_15360 5143b1b8d20cc0a96c97d1adbbc969d4 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 257 2.7E-67 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_15360 5143b1b8d20cc0a96c97d1adbbc969d4 266 Gene3D G3DSA:3.40.190.10 37 256 1.9E-77 T 11-10-2018 AMS64_15360 5143b1b8d20cc0a96c97d1adbbc969d4 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AMS64_15360 5143b1b8d20cc0a96c97d1adbbc969d4 266 SMART SM00062 36 259 2.4E-67 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 Pfam PF00154 recA bacterial DNA recombination protein 7 268 1.4E-145 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 Gene3D G3DSA:3.40.50.300 26 267 2.3E-83 T 11-10-2018 AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 SMART SM00382 57 228 1.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 SUPERFAMILY SSF54752 268 324 1.15E-18 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 ProSitePatterns PS00321 recA signature. 213 221 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 Hamap MF_00268 Protein RecA [recA]. 5 329 50.94 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.3E-171 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 SUPERFAMILY SSF52540 4 267 5.58E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 PRINTS PR00142 RecA protein signature 165 194 2.4E-80 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 PRINTS PR00142 RecA protein signature 210 238 2.4E-80 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 PRINTS PR00142 RecA protein signature 297 314 2.4E-80 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 PRINTS PR00142 RecA protein signature 93 122 2.4E-80 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 PRINTS PR00142 RecA protein signature 243 272 2.4E-80 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 PRINTS PR00142 RecA protein signature 127 156 2.4E-80 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMS64_03570 1f8feb018800daa0d9b02e3caca73f5d 354 Gene3D G3DSA:3.30.250.10 268 344 1.1E-22 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AMS64_03735 a5795364bfa0d6831088f4959706a01c 315 SUPERFAMILY SSF52317 17 297 4.01E-101 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_03735 a5795364bfa0d6831088f4959706a01c 315 Pfam PF04204 Homoserine O-succinyltransferase 2 299 5.6E-134 T 11-10-2018 IPR033752 MetA family AMS64_03735 a5795364bfa0d6831088f4959706a01c 315 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-102 T 11-10-2018 AMS64_03735 a5795364bfa0d6831088f4959706a01c 315 Gene3D G3DSA:3.40.50.880 1 301 1.9E-121 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_03735 a5795364bfa0d6831088f4959706a01c 315 PIRSF PIRSF000450 1 309 5.2E-144 T 11-10-2018 IPR033752 MetA family AMS64_03735 a5795364bfa0d6831088f4959706a01c 315 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.7E-150 T 11-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 AMS64_03735 a5795364bfa0d6831088f4959706a01c 315 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.02 T 11-10-2018 IPR033752 MetA family AMS64_20485 e99d1d641df2b9beff7e81f9933feb9b 406 Gene3D G3DSA:3.40.50.300 1 203 1.4E-66 T 11-10-2018 AMS64_20485 e99d1d641df2b9beff7e81f9933feb9b 406 Gene3D G3DSA:3.40.50.300 208 361 8.1E-43 T 11-10-2018 AMS64_20485 e99d1d641df2b9beff7e81f9933feb9b 406 Pfam PF00270 DEAD/DEAH box helicase 24 188 4.3E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_20485 e99d1d641df2b9beff7e81f9933feb9b 406 SUPERFAMILY SSF52540 69 353 4.5E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_20485 e99d1d641df2b9beff7e81f9933feb9b 406 SMART SM00490 252 333 2.3E-27 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_20485 e99d1d641df2b9beff7e81f9933feb9b 406 SMART SM00487 19 216 5.8E-51 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_20485 e99d1d641df2b9beff7e81f9933feb9b 406 Pfam PF00271 Helicase conserved C-terminal domain 225 333 4.7E-24 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_20485 e99d1d641df2b9beff7e81f9933feb9b 406 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 147 155 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMS64_04050 db871369229cbbff44d3551872deb6be 94 SUPERFAMILY SSF46565 2 71 1.31E-23 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMS64_04050 db871369229cbbff44d3551872deb6be 94 Pfam PF00226 DnaJ domain 3 69 1.2E-20 T 11-10-2018 IPR001623 DnaJ domain AMS64_04050 db871369229cbbff44d3551872deb6be 94 Gene3D G3DSA:1.10.287.110 1 90 2.3E-24 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMS64_04050 db871369229cbbff44d3551872deb6be 94 SMART SM00271 2 65 7.8E-24 T 11-10-2018 IPR001623 DnaJ domain AMS64_04050 db871369229cbbff44d3551872deb6be 94 PRINTS PR00625 DnaJ domain signature 45 65 1.5E-16 T 11-10-2018 IPR001623 DnaJ domain AMS64_04050 db871369229cbbff44d3551872deb6be 94 PRINTS PR00625 DnaJ domain signature 23 38 1.5E-16 T 11-10-2018 IPR001623 DnaJ domain AMS64_04050 db871369229cbbff44d3551872deb6be 94 PRINTS PR00625 DnaJ domain signature 5 23 1.5E-16 T 11-10-2018 IPR001623 DnaJ domain AMS64_20630 eeb1325a849381164b523802319ccb1d 473 Gene3D G3DSA:2.70.50.50 24 192 1.2E-72 T 11-10-2018 AMS64_20630 eeb1325a849381164b523802319ccb1d 473 SUPERFAMILY SSF81296 25 192 3.22E-63 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_20630 eeb1325a849381164b523802319ccb1d 473 Gene3D G3DSA:3.30.70.2150 199 307 3.4E-37 T 11-10-2018 AMS64_20630 eeb1325a849381164b523802319ccb1d 473 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 25 188 1.0E-38 T 11-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AMS64_20630 eeb1325a849381164b523802319ccb1d 473 Gene3D G3DSA:2.60.40.2550 309 404 5.7E-24 T 11-10-2018 AMS64_16510 cbef8a99db899f96388baa9bc5bda8cd 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.845 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMS64_16510 cbef8a99db899f96388baa9bc5bda8cd 294 Pfam PF01513 ATP-NAD kinase 8 273 1.1E-67 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMS64_16510 cbef8a99db899f96388baa9bc5bda8cd 294 SUPERFAMILY SSF111331 7 291 3.66E-91 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMS64_16510 cbef8a99db899f96388baa9bc5bda8cd 294 Gene3D G3DSA:2.60.200.30 128 266 5.0E-93 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMS64_16510 cbef8a99db899f96388baa9bc5bda8cd 294 Gene3D G3DSA:3.40.50.10330 26 289 5.0E-93 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMS64_15775 d0c7929a5c670c5ee7d07029f6cc3ae5 223 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 26.321 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_15775 d0c7929a5c670c5ee7d07029f6cc3ae5 223 Pfam PF02107 Flagellar L-ring protein 43 222 5.3E-61 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_15775 d0c7929a5c670c5ee7d07029f6cc3ae5 223 PRINTS PR01008 Flagellar L-ring protein signature 136 151 2.2E-23 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_15775 d0c7929a5c670c5ee7d07029f6cc3ae5 223 PRINTS PR01008 Flagellar L-ring protein signature 162 178 2.2E-23 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_15775 d0c7929a5c670c5ee7d07029f6cc3ae5 223 PRINTS PR01008 Flagellar L-ring protein signature 199 213 2.2E-23 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_15775 d0c7929a5c670c5ee7d07029f6cc3ae5 223 PRINTS PR01008 Flagellar L-ring protein signature 64 76 2.2E-23 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_15775 d0c7929a5c670c5ee7d07029f6cc3ae5 223 PRINTS PR01008 Flagellar L-ring protein signature 183 197 2.2E-23 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 Gene3D G3DSA:3.30.360.10 287 452 2.7E-115 T 11-10-2018 AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 1.8E-113 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 5.3E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 5.3E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 5.3E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 5.3E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 Gene3D G3DSA:3.40.50.720 129 463 2.7E-115 T 11-10-2018 AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 7.1E-47 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 SMART SM00846 127 288 2.8E-52 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 SUPERFAMILY SSF55347 288 451 2.03E-53 T 11-10-2018 AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 SUPERFAMILY SSF51735 127 314 4.68E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_06120 6e67da01d39c07bb5e3f83f3c9c3a74b 477 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 1.3E-20 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 SUPERFAMILY SSF55874 336 506 4.32E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 SMART SM00388 282 347 5.1E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 Pfam PF00072 Response regulator receiver domain 526 635 2.8E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 SUPERFAMILY SSF55785 140 267 8.03E-21 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 7.6E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 464 7.6E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 7.6E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 7.6E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 SMART SM00448 524 636 1.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 PIRSF PIRSF003182 1 770 0.0 T 11-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 Gene3D G3DSA:1.10.287.970 1 89 6.8E-36 T 11-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 Gene3D G3DSA:3.30.565.10 348 510 3.7E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 SMART SM00091 155 221 3.1E-5 T 11-10-2018 IPR000014 PAS domain AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 1.4E-16 T 11-10-2018 IPR000014 PAS domain AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 Pfam PF01627 Hpt domain 682 753 1.1E-10 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 Gene3D G3DSA:3.30.450.20 152 267 6.7E-20 T 11-10-2018 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 SUPERFAMILY SSF52172 521 641 1.71E-27 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 4.8E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 Gene3D G3DSA:1.20.120.160 651 770 1.6E-25 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 SUPERFAMILY SSF47384 269 347 2.35E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 SMART SM00387 394 509 5.6E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 SUPERFAMILY SSF47226 658 768 8.37E-25 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 Pfam PF08448 PAS fold 164 271 1.4E-15 T 11-10-2018 IPR013656 PAS fold-4 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 506 1.7E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 SMART SM00073 671 768 2.2E-6 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 Gene3D G3DSA:3.40.50.2300 511 639 4.2E-29 T 11-10-2018 AMS64_19500 fac63030ab44a7ca00f0887645d30194 770 Gene3D G3DSA:1.10.287.130 268 345 1.4E-21 T 11-10-2018 AMS64_20640 b93966a16bc231d7eae19dd63c0bfdd8 355 Gene3D G3DSA:3.40.50.300 2 258 2.0E-81 T 11-10-2018 AMS64_20640 b93966a16bc231d7eae19dd63c0bfdd8 355 Pfam PF00005 ABC transporter 18 164 4.9E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_20640 b93966a16bc231d7eae19dd63c0bfdd8 355 SUPERFAMILY SSF52540 3 246 5.72E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_20640 b93966a16bc231d7eae19dd63c0bfdd8 355 Pfam PF12857 TOBE-like domain 288 345 8.8E-9 T 11-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 AMS64_20640 b93966a16bc231d7eae19dd63c0bfdd8 355 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_20640 b93966a16bc231d7eae19dd63c0bfdd8 355 SMART SM00382 27 214 5.9E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_20640 b93966a16bc231d7eae19dd63c0bfdd8 355 SUPERFAMILY SSF50331 240 344 7.94E-9 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMS64_20640 b93966a16bc231d7eae19dd63c0bfdd8 355 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 4.0E-119 T 11-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 AMS64_04990 630e30c1bbdd20d2acea9b74edf97584 391 SUPERFAMILY SSF50156 340 389 1.33E-5 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMS64_04990 630e30c1bbdd20d2acea9b74edf97584 391 Gene3D G3DSA:2.40.70.10 43 175 2.0E-18 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMS64_04990 630e30c1bbdd20d2acea9b74edf97584 391 Pfam PF13650 Aspartyl protease 46 152 1.2E-11 T 11-10-2018 AMS64_04990 630e30c1bbdd20d2acea9b74edf97584 391 Gene3D G3DSA:2.40.70.10 186 304 5.3E-6 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMS64_04990 630e30c1bbdd20d2acea9b74edf97584 391 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 57 68 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AMS64_04990 630e30c1bbdd20d2acea9b74edf97584 391 SUPERFAMILY SSF50630 38 160 2.82E-10 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMS64_12670 372d9b7bd1ba3db24a2f2ce8d5f6e8c8 326 Pfam PF12146 Serine aminopeptidase, S33 78 190 2.2E-20 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AMS64_12670 372d9b7bd1ba3db24a2f2ce8d5f6e8c8 326 SUPERFAMILY SSF53474 52 319 2.1E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_12670 372d9b7bd1ba3db24a2f2ce8d5f6e8c8 326 Gene3D G3DSA:3.40.50.1820 51 322 2.0E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_10680 0819ed4b3f8f128e7304d3f6e29857fd 380 Gene3D G3DSA:1.20.140.10 232 377 4.0E-50 T 11-10-2018 AMS64_10680 0819ed4b3f8f128e7304d3f6e29857fd 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 375 1.5E-44 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMS64_10680 0819ed4b3f8f128e7304d3f6e29857fd 380 PIRSF PIRSF016578 128 380 2.7E-12 T 11-10-2018 AMS64_10680 0819ed4b3f8f128e7304d3f6e29857fd 380 PIRSF PIRSF016578 1 103 0.035 T 11-10-2018 AMS64_10680 0819ed4b3f8f128e7304d3f6e29857fd 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMS64_10680 0819ed4b3f8f128e7304d3f6e29857fd 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 1.2E-27 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMS64_10680 0819ed4b3f8f128e7304d3f6e29857fd 380 Gene3D G3DSA:1.10.540.10 1 118 2.1E-42 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMS64_10680 0819ed4b3f8f128e7304d3f6e29857fd 380 SUPERFAMILY SSF56645 2 240 7.2E-87 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMS64_10680 0819ed4b3f8f128e7304d3f6e29857fd 380 Gene3D G3DSA:2.40.110.10 119 231 9.6E-47 T 11-10-2018 AMS64_10680 0819ed4b3f8f128e7304d3f6e29857fd 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 116 7.3E-35 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMS64_10680 0819ed4b3f8f128e7304d3f6e29857fd 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMS64_10680 0819ed4b3f8f128e7304d3f6e29857fd 380 SUPERFAMILY SSF47203 227 378 7.73E-50 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 SUPERFAMILY SSF47323 642 897 1.25E-68 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 SUPERFAMILY SSF50677 191 363 2.09E-57 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 SUPERFAMILY SSF52374 1 641 2.79E-136 T 11-10-2018 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 948 16.005 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 2.7E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 2.7E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 2.7E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 2.7E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 2.7E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 Gene3D G3DSA:1.10.730.10 575 817 4.6E-70 T 11-10-2018 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 SUPERFAMILY SSF46589 883 947 1.2E-16 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.1E-225 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 Gene3D G3DSA:3.40.50.620 2 196 1.2E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 Pfam PF08264 Anticodon-binding domain of tRNA 674 825 1.8E-40 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 Gene3D G3DSA:3.90.740.10 197 357 1.6E-48 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 Gene3D G3DSA:3.40.50.620 358 547 1.7E-42 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 883 946 2.5E-16 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 Gene3D G3DSA:1.10.287.380 876 948 1.5E-17 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AMS64_02340 128c7f91fe5a9daa78bf5d6812b13c46 950 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 931 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMS64_00690 2337304c9f37f3da76ce37e89c5dbffc 546 Pfam PF03109 ABC1 family 113 230 7.8E-35 T 11-10-2018 IPR004147 UbiB domain AMS64_00690 2337304c9f37f3da76ce37e89c5dbffc 546 SUPERFAMILY SSF56112 94 436 3.07E-46 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMS64_00690 2337304c9f37f3da76ce37e89c5dbffc 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 1.9E-180 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AMS64_00690 2337304c9f37f3da76ce37e89c5dbffc 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 540 57.447 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AMS64_14300 280609cdaa60535006fb9d5c8bd7b8bc 230 Pfam PF02224 Cytidylate kinase 9 221 8.2E-82 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AMS64_14300 280609cdaa60535006fb9d5c8bd7b8bc 230 Gene3D G3DSA:3.40.50.300 2 228 2.9E-84 T 11-10-2018 AMS64_14300 280609cdaa60535006fb9d5c8bd7b8bc 230 SUPERFAMILY SSF52540 5 223 7.55E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_14300 280609cdaa60535006fb9d5c8bd7b8bc 230 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 219 6.2E-90 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AMS64_14300 280609cdaa60535006fb9d5c8bd7b8bc 230 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 35.09 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AMS64_01870 a233ade1172a488494e886e18566666e 216 Pfam PF13599 Pentapeptide repeats (9 copies) 98 171 7.5E-10 T 11-10-2018 IPR001646 Pentapeptide repeat AMS64_01870 a233ade1172a488494e886e18566666e 216 Pfam PF13599 Pentapeptide repeats (9 copies) 7 74 1.3E-6 T 11-10-2018 IPR001646 Pentapeptide repeat AMS64_01870 a233ade1172a488494e886e18566666e 216 SUPERFAMILY SSF141571 13 198 1.57E-36 T 11-10-2018 AMS64_01870 a233ade1172a488494e886e18566666e 216 Gene3D G3DSA:2.160.20.80 1 216 1.8E-85 T 11-10-2018 AMS64_01870 a233ade1172a488494e886e18566666e 216 Pfam PF00805 Pentapeptide repeats (8 copies) 173 198 5.8E-5 T 11-10-2018 IPR001646 Pentapeptide repeat AMS64_12680 67a6eca930243a2b1a127add9dae008d 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 8 191 1.7E-45 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMS64_12680 67a6eca930243a2b1a127add9dae008d 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 8 191 2.1E-53 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMS64_12680 67a6eca930243a2b1a127add9dae008d 198 Gene3D G3DSA:3.40.50.10420 1 196 1.5E-56 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AMS64_12680 67a6eca930243a2b1a127add9dae008d 198 SUPERFAMILY SSF100950 7 197 4.19E-58 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AMS64_12680 67a6eca930243a2b1a127add9dae008d 198 PIRSF PIRSF006806 5 194 8.1E-37 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMS64_07430 00df2a201a7261add096023c3d4e43c1 214 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 3 200 7.0E-79 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 AMS64_07430 00df2a201a7261add096023c3d4e43c1 214 SUPERFAMILY SSF52540 2 195 1.54E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07430 00df2a201a7261add096023c3d4e43c1 214 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_07430 00df2a201a7261add096023c3d4e43c1 214 Gene3D G3DSA:3.40.50.300 1 203 3.0E-46 T 11-10-2018 AMS64_07430 00df2a201a7261add096023c3d4e43c1 214 SMART SM00382 27 210 5.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_07430 00df2a201a7261add096023c3d4e43c1 214 Pfam PF00005 ABC transporter 19 160 1.1E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_00515 2fb64ae270c5911cb54821a1dc0ece76 302 Pfam PF02195 ParB-like nuclease domain 48 136 1.2E-26 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AMS64_00515 2fb64ae270c5911cb54821a1dc0ece76 302 SUPERFAMILY SSF110849 45 181 5.23E-36 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AMS64_00515 2fb64ae270c5911cb54821a1dc0ece76 302 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 43 218 1.8E-56 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AMS64_00515 2fb64ae270c5911cb54821a1dc0ece76 302 Gene3D G3DSA:1.10.10.2830 123 236 9.3E-36 T 11-10-2018 AMS64_00515 2fb64ae270c5911cb54821a1dc0ece76 302 Gene3D G3DSA:3.90.1530.30 59 122 1.3E-27 T 11-10-2018 AMS64_00515 2fb64ae270c5911cb54821a1dc0ece76 302 SMART SM00470 46 136 6.4E-33 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AMS64_14350 440c79739da9be77cd53aa7c95ac109e 312 SUPERFAMILY SSF46785 5 112 1.36E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_14350 440c79739da9be77cd53aa7c95ac109e 312 Gene3D G3DSA:1.10.10.10 3 89 2.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_14350 440c79739da9be77cd53aa7c95ac109e 312 Pfam PF03466 LysR substrate binding domain 90 287 2.1E-28 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_14350 440c79739da9be77cd53aa7c95ac109e 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.1E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_14350 440c79739da9be77cd53aa7c95ac109e 312 Gene3D G3DSA:3.40.190.290 91 290 5.7E-48 T 11-10-2018 AMS64_14350 440c79739da9be77cd53aa7c95ac109e 312 SUPERFAMILY SSF53850 90 293 5.25E-32 T 11-10-2018 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.7E-40 T 11-10-2018 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.7E-40 T 11-10-2018 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.7E-40 T 11-10-2018 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.7E-40 T 11-10-2018 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.437 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 Gene3D G3DSA:3.40.50.261 124 288 4.3E-77 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 SUPERFAMILY SSF51735 1 122 2.73E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 Gene3D G3DSA:3.40.50.720 1 123 8.4E-52 T 11-10-2018 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 PIRSF PIRSF001553 1 289 3.8E-136 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 Pfam PF02629 CoA binding domain 6 99 2.5E-31 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 Pfam PF00549 CoA-ligase 151 270 1.0E-21 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 SUPERFAMILY SSF52210 123 286 3.53E-58 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 4.1E-146 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AMS64_08280 e850a28d2dc6f2c3edf603bbaf2ab35a 290 SMART SM00881 4 100 2.2E-36 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 39 510 4.5E-174 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 397 412 2.6E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 283 303 2.6E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 488 507 2.6E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 363 382 2.6E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 199 216 2.6E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 Pfam PF03958 Bacterial type II/III secretion system short domain 115 175 2.4E-6 T 11-10-2018 IPR005644 NolW-like AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 Pfam PF03958 Bacterial type II/III secretion system short domain 188 280 1.4E-18 T 11-10-2018 IPR005644 NolW-like AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 Gene3D G3DSA:3.30.1370.120 186 280 7.0E-11 T 11-10-2018 IPR038591 NolW-like superfamily AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 Pfam PF00263 Bacterial type II and III secretion system protein 350 510 5.3E-42 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 Gene3D G3DSA:3.55.50.30 26 110 1.6E-27 T 11-10-2018 AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 Gene3D G3DSA:3.30.1370.120 111 181 1.2E-15 T 11-10-2018 IPR038591 NolW-like superfamily AMS64_07805 00ad5e0bdec940cd40f9ca0fff602528 612 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 455 488 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 39 510 4.5E-174 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 397 412 2.6E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 283 303 2.6E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 488 507 2.6E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 363 382 2.6E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 199 216 2.6E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 Pfam PF03958 Bacterial type II/III secretion system short domain 115 175 2.4E-6 T 11-10-2018 IPR005644 NolW-like AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 Pfam PF03958 Bacterial type II/III secretion system short domain 188 280 1.4E-18 T 11-10-2018 IPR005644 NolW-like AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 Gene3D G3DSA:3.30.1370.120 186 280 7.0E-11 T 11-10-2018 IPR038591 NolW-like superfamily AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 Pfam PF00263 Bacterial type II and III secretion system protein 350 510 5.3E-42 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 Gene3D G3DSA:3.55.50.30 26 110 1.6E-27 T 11-10-2018 AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 Gene3D G3DSA:3.30.1370.120 111 181 1.2E-15 T 11-10-2018 IPR038591 NolW-like superfamily AMS64_13750 00ad5e0bdec940cd40f9ca0fff602528 612 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 455 488 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AMS64_06790 30c92318976f14a508ffeb6b8441c890 662 PRINTS PR01607 Apyrase family signature 257 280 1.6E-22 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_06790 30c92318976f14a508ffeb6b8441c890 662 PRINTS PR01607 Apyrase family signature 469 492 1.6E-22 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_06790 30c92318976f14a508ffeb6b8441c890 662 PRINTS PR01607 Apyrase family signature 551 570 1.6E-22 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_06790 30c92318976f14a508ffeb6b8441c890 662 PRINTS PR01607 Apyrase family signature 28 46 1.6E-22 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_06790 30c92318976f14a508ffeb6b8441c890 662 PRINTS PR01607 Apyrase family signature 238 255 1.6E-22 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_06790 30c92318976f14a508ffeb6b8441c890 662 PRINTS PR01607 Apyrase family signature 303 323 1.6E-22 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_06790 30c92318976f14a508ffeb6b8441c890 662 Gene3D G3DSA:3.60.21.10 20 396 2.9E-94 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMS64_06790 30c92318976f14a508ffeb6b8441c890 662 Gene3D G3DSA:3.90.780.10 397 604 6.0E-34 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_06790 30c92318976f14a508ffeb6b8441c890 662 SUPERFAMILY SSF55816 399 604 3.53E-26 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_06790 30c92318976f14a508ffeb6b8441c890 662 SUPERFAMILY SSF56300 25 359 2.68E-72 T 11-10-2018 AMS64_06790 30c92318976f14a508ffeb6b8441c890 662 Pfam PF00149 Calcineurin-like phosphoesterase 31 274 1.4E-9 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMS64_06790 30c92318976f14a508ffeb6b8441c890 662 Pfam PF02872 5'-nucleotidase, C-terminal domain 420 577 1.4E-21 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 Gene3D G3DSA:3.30.390.30 581 703 6.6E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 272 282 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 SUPERFAMILY SSF51905 233 604 1.94E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 Pfam PF09335 SNARE associated Golgi protein 67 184 5.2E-20 T 11-10-2018 IPR032816 SNARE associated Golgi protein AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 Gene3D G3DSA:3.50.50.60 238 565 1.1E-96 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 582 686 3.6E-25 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 239 559 3.4E-53 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 SUPERFAMILY SSF55424 578 693 1.65E-32 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 Gene3D G3DSA:3.50.50.60 377 503 1.1E-96 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 259 6.4E-27 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 404 422 6.4E-27 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 496 512 6.4E-27 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 365 383 6.4E-27 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 525 547 6.4E-27 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 404 429 1.7E-52 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 578 599 1.7E-52 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 261 1.7E-52 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 497 511 1.7E-52 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 540 547 1.7E-52 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 368 377 1.7E-52 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 665 685 1.7E-52 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 643 658 1.7E-52 T 11-10-2018 AMS64_16035 e6849908d25cd7f455d71033b2ae3a1a 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 286 1.7E-52 T 11-10-2018 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 706 732 1.6E-64 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.6E-64 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.6E-64 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 532 552 1.6E-64 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 383 403 1.6E-64 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 574 603 1.6E-64 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.6E-64 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 534 546 - T 11-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 SUPERFAMILY SSF51621 6 877 0.0 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 11-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 18.305 T 11-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 128 877 2.0E-280 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMS64_03515 a98a2612b04e1c2d1965239a75e49923 877 Gene3D G3DSA:1.20.1440.90 273 386 1.0E-25 T 11-10-2018 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 SUPERFAMILY SSF46589 1 112 1.15E-25 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.2E-28 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 429 39.744 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 Gene3D G3DSA:1.10.287.40 1 104 5.0E-19 T 11-10-2018 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 Gene3D G3DSA:3.30.930.10 105 430 1.3E-116 T 11-10-2018 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 233 407 7.2E-34 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 SUPERFAMILY SSF55681 116 427 4.15E-97 T 11-10-2018 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 PIRSF PIRSF001529 1 431 1.4E-174 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 PRINTS PR00981 Seryl-tRNA synthetase signature 342 358 1.3E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 PRINTS PR00981 Seryl-tRNA synthetase signature 273 285 1.3E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 PRINTS PR00981 Seryl-tRNA synthetase signature 285 298 1.3E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 PRINTS PR00981 Seryl-tRNA synthetase signature 360 376 1.3E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 PRINTS PR00981 Seryl-tRNA synthetase signature 325 338 1.3E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMS64_11125 33ee438942ac453f78753c7b47dfa453 431 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 424 4.5E-166 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMS64_00825 52837d4d78dbbd5317e2d995b6fe2d96 257 Gene3D G3DSA:3.40.50.300 3 257 6.2E-60 T 11-10-2018 AMS64_00825 52837d4d78dbbd5317e2d995b6fe2d96 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 255 2.5E-11 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMS64_00825 52837d4d78dbbd5317e2d995b6fe2d96 257 SUPERFAMILY SSF52540 7 255 2.88E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00825 52837d4d78dbbd5317e2d995b6fe2d96 257 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_00825 52837d4d78dbbd5317e2d995b6fe2d96 257 Pfam PF00005 ABC transporter 24 183 4.8E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_00825 52837d4d78dbbd5317e2d995b6fe2d96 257 SMART SM00382 32 233 9.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 Gene3D G3DSA:3.30.420.40 198 399 8.8E-86 T 11-10-2018 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 189.272 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 SUPERFAMILY SSF53067 159 398 2.67E-85 T 11-10-2018 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 TIGRFAM TIGR00016 ackA: acetate kinase 2 397 1.4E-172 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 PRINTS PR00471 Acetate kinase family signature 205 226 3.9E-48 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 PRINTS PR00471 Acetate kinase family signature 5 16 3.9E-48 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 PRINTS PR00471 Acetate kinase family signature 301 314 3.9E-48 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 PRINTS PR00471 Acetate kinase family signature 324 340 3.9E-48 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 PRINTS PR00471 Acetate kinase family signature 175 188 3.9E-48 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 PRINTS PR00471 Acetate kinase family signature 379 391 3.9E-48 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 205 222 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 SUPERFAMILY SSF53067 3 198 1.92E-62 T 11-10-2018 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 PIRSF PIRSF000722 1 400 3.3E-143 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 Pfam PF00871 Acetokinase family 5 391 3.7E-164 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_19570 d7f571dd3d25a50abc46ad6afaa2bf36 400 Gene3D G3DSA:3.30.420.40 2 197 1.4E-72 T 11-10-2018 AMS64_14105 c4e6a185027ef984b3080143c6d8aa17 578 SUPERFAMILY SSF52091 461 568 3.73E-14 T 11-10-2018 IPR036513 STAS domain superfamily AMS64_14105 c4e6a185027ef984b3080143c6d8aa17 578 Pfam PF01740 STAS domain 465 566 2.3E-11 T 11-10-2018 IPR002645 STAS domain AMS64_14105 c4e6a185027ef984b3080143c6d8aa17 578 Pfam PF00916 Sulfate permease family 31 417 1.2E-75 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMS64_14105 c4e6a185027ef984b3080143c6d8aa17 578 Gene3D G3DSA:3.30.750.24 453 568 2.3E-23 T 11-10-2018 IPR036513 STAS domain superfamily AMS64_14105 c4e6a185027ef984b3080143c6d8aa17 578 TIGRFAM TIGR00815 sulP: sulfate permease 23 566 8.1E-121 T 11-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 AMS64_11965 c5cb6ec4ac669593fb6ca408ddd5070d 464 SUPERFAMILY SSF46785 364 461 2.99E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_11965 c5cb6ec4ac669593fb6ca408ddd5070d 464 Pfam PF03288 Poxvirus D5 protein-like 363 459 4.2E-13 T 11-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal AMS64_11965 c5cb6ec4ac669593fb6ca408ddd5070d 464 Gene3D G3DSA:3.40.50.300 154 321 4.0E-13 T 11-10-2018 AMS64_11965 c5cb6ec4ac669593fb6ca408ddd5070d 464 Pfam PF08706 D5 N terminal like 65 140 8.0E-5 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal AMS64_11965 c5cb6ec4ac669593fb6ca408ddd5070d 464 Gene3D G3DSA:1.10.10.10 364 462 1.6E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_11965 c5cb6ec4ac669593fb6ca408ddd5070d 464 SMART SM00885 29 156 1.6E-5 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal AMS64_11965 c5cb6ec4ac669593fb6ca408ddd5070d 464 SUPERFAMILY SSF52540 172 310 1.3E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_15135 c759097f05f4ce579454f6f62e98aa3c 1627 Pfam PF01835 MG2 domain 375 467 1.1E-16 T 11-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 AMS64_15135 c759097f05f4ce579454f6f62e98aa3c 1627 Pfam PF00207 Alpha-2-macroglobulin family 952 1037 1.0E-6 T 11-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AMS64_15135 c759097f05f4ce579454f6f62e98aa3c 1627 SUPERFAMILY SSF48239 1155 1408 5.06E-32 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AMS64_15135 c759097f05f4ce579454f6f62e98aa3c 1627 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 735 889 5.1E-9 T 11-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AMS64_15135 c759097f05f4ce579454f6f62e98aa3c 1627 Gene3D G3DSA:1.50.10.20 1150 1414 2.9E-20 T 11-10-2018 AMS64_15135 c759097f05f4ce579454f6f62e98aa3c 1627 Gene3D G3DSA:2.60.40.1930 377 471 8.1E-6 T 11-10-2018 AMS64_15135 c759097f05f4ce579454f6f62e98aa3c 1627 SMART SM01360 951 1040 7.2E-20 T 11-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AMS64_15135 c759097f05f4ce579454f6f62e98aa3c 1627 PIRSF PIRSF038980 37 1626 0.0 T 11-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria AMS64_15135 c759097f05f4ce579454f6f62e98aa3c 1627 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 276 369 4.7E-23 T 11-10-2018 AMS64_15135 c759097f05f4ce579454f6f62e98aa3c 1627 SMART SM01359 734 889 1.7E-25 T 11-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AMS64_03180 433bc00956fc9b2e6677ddaf8bfa067e 238 Pfam PF04542 Sigma-70 region 2 27 99 3.4E-14 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_03180 433bc00956fc9b2e6677ddaf8bfa067e 238 SUPERFAMILY SSF88946 25 98 2.09E-20 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_03180 433bc00956fc9b2e6677ddaf8bfa067e 238 Pfam PF04545 Sigma-70, region 4 183 232 6.8E-12 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMS64_03180 433bc00956fc9b2e6677ddaf8bfa067e 238 Gene3D G3DSA:1.20.140.160 97 236 4.9E-35 T 11-10-2018 AMS64_03180 433bc00956fc9b2e6677ddaf8bfa067e 238 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 204 230 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_03180 433bc00956fc9b2e6677ddaf8bfa067e 238 Gene3D G3DSA:1.10.1740.10 13 96 9.5E-23 T 11-10-2018 AMS64_03180 433bc00956fc9b2e6677ddaf8bfa067e 238 SUPERFAMILY SSF88659 157 236 4.86E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_03180 433bc00956fc9b2e6677ddaf8bfa067e 238 SUPERFAMILY SSF88659 100 166 4.8E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_03180 433bc00956fc9b2e6677ddaf8bfa067e 238 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 234 8.9E-30 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMS64_03180 433bc00956fc9b2e6677ddaf8bfa067e 238 Pfam PF04539 Sigma-70 region 3 111 172 1.4E-9 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMS64_03180 433bc00956fc9b2e6677ddaf8bfa067e 238 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 27 234 5.0E-80 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMS64_01890 c88e82d4173782ab870157fad253bc4e 156 Pfam PF02556 Preprotein translocase subunit SecB 8 146 9.0E-59 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMS64_01890 c88e82d4173782ab870157fad253bc4e 156 Gene3D G3DSA:3.10.420.10 1 156 4.1E-61 T 11-10-2018 IPR035958 SecB-like superfamily AMS64_01890 c88e82d4173782ab870157fad253bc4e 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 16 33 1.3E-40 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMS64_01890 c88e82d4173782ab870157fad253bc4e 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 76 96 1.3E-40 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMS64_01890 c88e82d4173782ab870157fad253bc4e 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 126 144 1.3E-40 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMS64_01890 c88e82d4173782ab870157fad253bc4e 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 100 122 1.3E-40 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMS64_01890 c88e82d4173782ab870157fad253bc4e 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 148 34.009 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMS64_01890 c88e82d4173782ab870157fad253bc4e 156 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 9 143 1.3E-61 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMS64_01890 c88e82d4173782ab870157fad253bc4e 156 SUPERFAMILY SSF54611 4 144 6.54E-56 T 11-10-2018 IPR035958 SecB-like superfamily AMS64_05250 4bff68107a6284f8dcf5a4eb203540b9 1012 SUPERFAMILY SSF49373 808 856 1.06E-6 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments AMS64_05250 4bff68107a6284f8dcf5a4eb203540b9 1012 Gene3D G3DSA:2.60.40.1080 772 858 1.7E-11 T 11-10-2018 AMS64_05250 4bff68107a6284f8dcf5a4eb203540b9 1012 SUPERFAMILY SSF46626 577 745 6.06E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_05250 4bff68107a6284f8dcf5a4eb203540b9 1012 Pfam PF03150 Di-haem cytochrome c peroxidase 445 592 2.9E-53 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AMS64_05250 4bff68107a6284f8dcf5a4eb203540b9 1012 Pfam PF02368 Bacterial Ig-like domain (group 2) 776 852 1.7E-5 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 AMS64_05250 4bff68107a6284f8dcf5a4eb203540b9 1012 Gene3D G3DSA:1.10.760.10 436 578 1.4E-89 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_05250 4bff68107a6284f8dcf5a4eb203540b9 1012 SUPERFAMILY SSF46626 431 579 1.36E-51 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_05250 4bff68107a6284f8dcf5a4eb203540b9 1012 SMART SM00635 774 855 5.5E-4 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 AMS64_05250 4bff68107a6284f8dcf5a4eb203540b9 1012 Gene3D G3DSA:1.10.760.10 579 684 1.4E-89 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_05250 4bff68107a6284f8dcf5a4eb203540b9 1012 ProSitePatterns PS00018 EF-hand calcium-binding domain. 159 171 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMS64_05250 4bff68107a6284f8dcf5a4eb203540b9 1012 Pfam PF07603 Protein of unknown function (DUF1566) 918 1010 2.3E-9 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 Gene3D G3DSA:3.50.50.60 256 444 6.6E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_16215 e30326590f19564118b10525de4c3bcc 548 Gene3D G3DSA:3.50.50.60 123 247 2.9E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_16215 e30326590f19564118b10525de4c3bcc 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 146 1.8E-17 T 11-10-2018 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 278 1.8E-17 T 11-10-2018 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 401 1.8E-17 T 11-10-2018 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 351 367 1.8E-17 T 11-10-2018 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 524 535 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_16215 e30326590f19564118b10525de4c3bcc 548 Gene3D G3DSA:3.30.70.20 491 540 3.4E-8 T 11-10-2018 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 Pfam PF00037 4Fe-4S binding domain 517 539 1.3E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_16215 e30326590f19564118b10525de4c3bcc 548 SUPERFAMILY SSF46548 413 541 3.77E-17 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 SUPERFAMILY SSF46548 33 134 8.89E-23 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 34 112 1.0E-17 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 125 413 9.3E-31 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 256 280 1.9E-12 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 148 1.9E-12 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 389 407 1.9E-12 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 Gene3D G3DSA:1.10.1060.10 24 122 4.9E-23 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_16215 e30326590f19564118b10525de4c3bcc 548 SUPERFAMILY SSF51971 124 360 1.24E-53 T 11-10-2018 AMS64_19030 67bb60c0c6b533773c6d920730ee72dc 338 Gene3D G3DSA:3.40.50.720 128 272 5.2E-97 T 11-10-2018 AMS64_19030 67bb60c0c6b533773c6d920730ee72dc 338 SUPERFAMILY SSF51735 117 284 5.23E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_19030 67bb60c0c6b533773c6d920730ee72dc 338 Gene3D G3DSA:3.90.180.10 25 330 5.2E-97 T 11-10-2018 AMS64_19030 67bb60c0c6b533773c6d920730ee72dc 338 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 332 2.5E-119 T 11-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 AMS64_19030 67bb60c0c6b533773c6d920730ee72dc 338 Pfam PF13602 Zinc-binding dehydrogenase 191 331 2.8E-18 T 11-10-2018 AMS64_19030 67bb60c0c6b533773c6d920730ee72dc 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 89 2.7E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMS64_19030 67bb60c0c6b533773c6d920730ee72dc 338 SUPERFAMILY SSF50129 13 149 5.02E-31 T 11-10-2018 IPR011032 GroES-like superfamily AMS64_19030 67bb60c0c6b533773c6d920730ee72dc 338 SMART SM00829 13 331 4.2E-11 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMS64_00255 e06c2003cd5bcea475995dda208c5f20 208 ProSitePatterns PS00856 Guanylate kinase-like signature. 42 59 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMS64_00255 e06c2003cd5bcea475995dda208c5f20 208 Hamap MF_00328 Guanylate kinase [gmk]. 3 188 37.12 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AMS64_00255 e06c2003cd5bcea475995dda208c5f20 208 SMART SM00072 4 188 3.2E-69 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMS64_00255 e06c2003cd5bcea475995dda208c5f20 208 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 185 1.4E-72 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AMS64_00255 e06c2003cd5bcea475995dda208c5f20 208 Gene3D G3DSA:3.30.63.10 39 98 5.8E-69 T 11-10-2018 AMS64_00255 e06c2003cd5bcea475995dda208c5f20 208 Gene3D G3DSA:3.40.50.300 9 184 5.8E-69 T 11-10-2018 AMS64_00255 e06c2003cd5bcea475995dda208c5f20 208 SUPERFAMILY SSF52540 3 191 6.79E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00255 e06c2003cd5bcea475995dda208c5f20 208 Pfam PF00625 Guanylate kinase 6 185 3.9E-58 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMS64_01220 12b03151fac6ccd14584633973f165ac 144 Pfam PF03748 Flagellar basal body-associated protein FliL 42 144 3.1E-19 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AMS64_06185 0fd4c79d8c133edb3b4f280343e74854 321 Pfam PF03330 Lytic transglycolase 83 170 2.5E-18 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMS64_06185 0fd4c79d8c133edb3b4f280343e74854 321 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 84 176 3.3E-37 T 11-10-2018 IPR012997 Rare lipoprotein A AMS64_06185 0fd4c79d8c133edb3b4f280343e74854 321 Gene3D G3DSA:2.40.40.10 81 175 8.1E-30 T 11-10-2018 IPR036908 RlpA-like domain superfamily AMS64_06185 0fd4c79d8c133edb3b4f280343e74854 321 SUPERFAMILY SSF110997 249 320 6.54E-8 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMS64_06185 0fd4c79d8c133edb3b4f280343e74854 321 SUPERFAMILY SSF50685 87 170 2.3E-7 T 11-10-2018 IPR036908 RlpA-like domain superfamily AMS64_06185 0fd4c79d8c133edb3b4f280343e74854 321 Pfam PF05036 Sporulation related domain 254 318 8.4E-6 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AMS64_06185 0fd4c79d8c133edb3b4f280343e74854 321 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 13 174 21.553 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AMS64_02425 f4603e9be59eb22966468ca07292d01f 395 Pfam PF04865 Baseplate J-like protein 83 307 2.2E-20 T 11-10-2018 IPR006949 Baseplate protein J-like AMS64_21375 ebc07bb684da332eb04cf56cc8fa4053 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 6.1E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_21375 ebc07bb684da332eb04cf56cc8fa4053 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 9.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_21375 ebc07bb684da332eb04cf56cc8fa4053 186 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 Gene3D G3DSA:3.40.50.720 6 259 4.6E-108 T 11-10-2018 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.865 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 Gene3D G3DSA:3.40.50.10860 8 276 4.6E-108 T 11-10-2018 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 2.2E-41 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 SUPERFAMILY SSF51735 123 279 1.24E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 SUPERFAMILY SSF53223 1 122 1.92E-41 T 11-10-2018 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMS64_11200 6c475f3e114400a5774be9dc9be38209 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 1.4E-67 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMS64_17895 0766d0655c0b3ad9dd723792f0240465 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 242 1.2E-80 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AMS64_17895 0766d0655c0b3ad9dd723792f0240465 243 Pfam PF04452 RNA methyltransferase 20 236 1.6E-70 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AMS64_17895 0766d0655c0b3ad9dd723792f0240465 243 SUPERFAMILY SSF88697 2 68 1.66E-17 T 11-10-2018 IPR015947 PUA-like superfamily AMS64_17895 0766d0655c0b3ad9dd723792f0240465 243 Gene3D G3DSA:2.40.240.20 1 69 4.7E-24 T 11-10-2018 AMS64_17895 0766d0655c0b3ad9dd723792f0240465 243 Gene3D G3DSA:3.40.1280.10 74 243 1.4E-62 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMS64_17895 0766d0655c0b3ad9dd723792f0240465 243 PIRSF PIRSF015601 3 242 7.4E-53 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AMS64_17895 0766d0655c0b3ad9dd723792f0240465 243 SUPERFAMILY SSF75217 75 242 2.67E-50 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 Gene3D G3DSA:3.30.70.1440 665 862 7.1E-270 T 11-10-2018 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 Gene3D G3DSA:3.30.70.1430 42 812 7.1E-270 T 11-10-2018 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 SUPERFAMILY SSF82693 46 128 1.12E-19 T 11-10-2018 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 Gene3D G3DSA:1.20.1640.10 509 1025 7.1E-270 T 11-10-2018 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 Gene3D G3DSA:1.20.1640.10 15 508 7.1E-270 T 11-10-2018 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 SUPERFAMILY SSF82714 716 800 7.06E-19 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1034 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 Pfam PF00873 AcrB/AcrD/AcrF family 6 1027 7.9E-241 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 SUPERFAMILY SSF82714 185 269 4.05E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 SUPERFAMILY SSF82866 801 1031 5.49E-48 T 11-10-2018 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.6E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.6E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.6E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.6E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.6E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.6E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.6E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 Gene3D G3DSA:3.30.70.1430 562 664 7.1E-270 T 11-10-2018 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 Gene3D G3DSA:3.30.70.1320 135 328 7.1E-270 T 11-10-2018 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 SUPERFAMILY SSF82693 137 328 4.19E-23 T 11-10-2018 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 SUPERFAMILY SSF82866 294 498 4.97E-41 T 11-10-2018 AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 Gene3D G3DSA:3.30.2090.10 182 274 7.1E-270 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_13050 d71c6cafd6bb26ba8379acaa41ef172e 1042 Gene3D G3DSA:3.30.2090.10 716 804 7.1E-270 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_01575 56a88c1b865677eb9ac3b76b23a52995 329 PIRSF PIRSF005096 2 329 2.5E-98 T 11-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AMS64_01575 56a88c1b865677eb9ac3b76b23a52995 329 Pfam PF01263 Aldose 1-epimerase 9 325 9.0E-68 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AMS64_01575 56a88c1b865677eb9ac3b76b23a52995 329 Gene3D G3DSA:2.70.98.10 1 327 6.1E-99 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMS64_01575 56a88c1b865677eb9ac3b76b23a52995 329 SUPERFAMILY SSF74650 6 326 6.03E-89 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMS64_01575 56a88c1b865677eb9ac3b76b23a52995 329 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 3 326 7.4E-125 T 11-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AMS64_21570 6c79ad4495ede38c9b2051bccb2518e8 323 Gene3D G3DSA:3.40.190.10 32 321 2.6E-97 T 11-10-2018 AMS64_21570 6c79ad4495ede38c9b2051bccb2518e8 323 SUPERFAMILY SSF53850 28 322 4.43E-76 T 11-10-2018 AMS64_21570 6c79ad4495ede38c9b2051bccb2518e8 323 Gene3D G3DSA:3.40.190.10 119 257 2.6E-97 T 11-10-2018 AMS64_21570 6c79ad4495ede38c9b2051bccb2518e8 323 Pfam PF16868 NMT1-like family 32 321 5.3E-88 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AMS64_21570 6c79ad4495ede38c9b2051bccb2518e8 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 321 1.8E-96 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AMS64_16655 6503ec141dce964783cd08c521f4c4b6 357 Gene3D G3DSA:1.10.40.60 232 270 1.1E-7 T 11-10-2018 IPR038072 GspK, central domain superfamily AMS64_16655 6503ec141dce964783cd08c521f4c4b6 357 Pfam PF03934 Type II secretion system (T2SS), protein K 142 276 8.2E-13 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AMS64_16655 6503ec141dce964783cd08c521f4c4b6 357 SUPERFAMILY SSF158544 144 227 3.14E-8 T 11-10-2018 IPR038072 GspK, central domain superfamily AMS64_16655 6503ec141dce964783cd08c521f4c4b6 357 Gene3D G3DSA:1.10.40.60 145 231 1.1E-7 T 11-10-2018 IPR038072 GspK, central domain superfamily AMS64_03260 80462f1e268e50d3fa1a426d4ab53a06 250 Pfam PF08478 POTRA domain, FtsQ-type 45 114 5.2E-17 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type AMS64_03260 80462f1e268e50d3fa1a426d4ab53a06 250 Pfam PF03799 Cell division protein FtsQ 118 228 1.3E-18 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB AMS64_03260 80462f1e268e50d3fa1a426d4ab53a06 250 Gene3D G3DSA:3.10.20.310 46 114 1.8E-23 T 11-10-2018 AMS64_03260 80462f1e268e50d3fa1a426d4ab53a06 250 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 11 236 19.738 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 AMS64_03260 80462f1e268e50d3fa1a426d4ab53a06 250 Gene3D G3DSA:3.40.50.11690 116 241 7.0E-36 T 11-10-2018 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 SMART SM01086 766 855 1.9E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMS64_21950 86b63551b12d353c965c44b39ca65683 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 Gene3D G3DSA:1.10.8.60 766 857 8.3E-26 T 11-10-2018 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 320 4.4E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 5.3E-13 T 11-10-2018 IPR004176 Clp, N-terminal AMS64_21950 86b63551b12d353c965c44b39ca65683 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.5E-11 T 11-10-2018 IPR004176 Clp, N-terminal AMS64_21950 86b63551b12d353c965c44b39ca65683 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 SUPERFAMILY SSF52540 546 843 1.96E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_21950 86b63551b12d353c965c44b39ca65683 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 SUPERFAMILY SSF81923 4 156 3.53E-41 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 SMART SM00382 597 758 5.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_21950 86b63551b12d353c965c44b39ca65683 857 SMART SM00382 198 343 2.7E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_21950 86b63551b12d353c965c44b39ca65683 857 Gene3D G3DSA:3.40.50.300 343 544 5.0E-67 T 11-10-2018 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 6.4E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 6.4E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 6.4E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 6.4E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 3.4E-56 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 844 1.2E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMS64_21950 86b63551b12d353c965c44b39ca65683 857 Gene3D G3DSA:1.10.1780.10 1 147 5.7E-32 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 SUPERFAMILY SSF52540 159 545 8.5E-97 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_21950 86b63551b12d353c965c44b39ca65683 857 Gene3D G3DSA:3.40.50.300 550 764 3.2E-90 T 11-10-2018 AMS64_21950 86b63551b12d353c965c44b39ca65683 857 Gene3D G3DSA:3.40.50.300 148 342 1.3E-73 T 11-10-2018 AMS64_06580 cfa52722323c63a9a47123aca9cb1020 199 Pfam PF04350 Pilus assembly protein, PilO 49 191 1.2E-48 T 11-10-2018 IPR007445 Pilus assembly protein, PilO AMS64_06580 cfa52722323c63a9a47123aca9cb1020 199 Gene3D G3DSA:3.30.70.60 94 198 1.0E-30 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMS64_06580 cfa52722323c63a9a47123aca9cb1020 199 PIRSF PIRSF016482 1 198 2.0E-53 T 11-10-2018 IPR007445 Pilus assembly protein, PilO AMS64_06580 cfa52722323c63a9a47123aca9cb1020 199 Gene3D G3DSA:1.10.287.540 57 93 1.5E-7 T 11-10-2018 AMS64_21250 427eee0e08fae00b2f50813a20b054ac 392 SUPERFAMILY SSF116734 3 201 3.11E-35 T 11-10-2018 AMS64_21250 427eee0e08fae00b2f50813a20b054ac 392 Gene3D G3DSA:3.90.220.20 1 200 1.7E-33 T 11-10-2018 AMS64_21250 427eee0e08fae00b2f50813a20b054ac 392 Gene3D G3DSA:3.90.220.20 201 392 1.3E-21 T 11-10-2018 AMS64_21250 427eee0e08fae00b2f50813a20b054ac 392 Pfam PF01420 Type I restriction modification DNA specificity domain 2 182 2.7E-17 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AMS64_21250 427eee0e08fae00b2f50813a20b054ac 392 SUPERFAMILY SSF116734 206 392 2.78E-21 T 11-10-2018 AMS64_22095 4b2c7aba0b7cff2d3471086b1fa37396 69 SUPERFAMILY SSF57716 35 67 1.71E-7 T 11-10-2018 AMS64_22095 4b2c7aba0b7cff2d3471086b1fa37396 69 Gene3D G3DSA:1.20.120.910 1 67 2.3E-17 T 11-10-2018 AMS64_22095 4b2c7aba0b7cff2d3471086b1fa37396 69 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 2 65 1.3E-19 T 11-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AMS64_22095 4b2c7aba0b7cff2d3471086b1fa37396 69 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 36 60 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMS64_22095 4b2c7aba0b7cff2d3471086b1fa37396 69 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 66 3.3E-12 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMS64_15545 4b2c7aba0b7cff2d3471086b1fa37396 69 SUPERFAMILY SSF57716 35 67 1.71E-7 T 11-10-2018 AMS64_15545 4b2c7aba0b7cff2d3471086b1fa37396 69 Gene3D G3DSA:1.20.120.910 1 67 2.3E-17 T 11-10-2018 AMS64_15545 4b2c7aba0b7cff2d3471086b1fa37396 69 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 2 65 1.3E-19 T 11-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AMS64_15545 4b2c7aba0b7cff2d3471086b1fa37396 69 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 36 60 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMS64_15545 4b2c7aba0b7cff2d3471086b1fa37396 69 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 66 3.3E-12 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMS64_20400 bb35b2547caa9ccb06096ed4faaf9afe 274 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 101 1.2E-21 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMS64_20400 bb35b2547caa9ccb06096ed4faaf9afe 274 Gene3D G3DSA:3.40.50.720 2 166 1.7E-47 T 11-10-2018 AMS64_20400 bb35b2547caa9ccb06096ed4faaf9afe 274 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 270 25.114 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMS64_20400 bb35b2547caa9ccb06096ed4faaf9afe 274 SUPERFAMILY SSF51735 4 162 2.08E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_20400 bb35b2547caa9ccb06096ed4faaf9afe 274 Gene3D G3DSA:1.10.3730.10 167 274 2.5E-32 T 11-10-2018 AMS64_20400 bb35b2547caa9ccb06096ed4faaf9afe 274 PIRSF PIRSF000193 3 272 3.5E-70 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMS64_20400 bb35b2547caa9ccb06096ed4faaf9afe 274 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 225 248 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMS64_20400 bb35b2547caa9ccb06096ed4faaf9afe 274 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 270 1.2E-66 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMS64_20400 bb35b2547caa9ccb06096ed4faaf9afe 274 SUPERFAMILY SSF48179 165 271 2.72E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_20400 bb35b2547caa9ccb06096ed4faaf9afe 274 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 165 270 1.1E-28 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMS64_00785 f083e4c0f9b2f5af106efeecbeeeabae 489 SUPERFAMILY SSF143968 323 485 1.05E-67 T 11-10-2018 AMS64_00785 f083e4c0f9b2f5af106efeecbeeeabae 489 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 7.3E-172 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AMS64_00785 f083e4c0f9b2f5af106efeecbeeeabae 489 Gene3D G3DSA:3.40.1670.10 337 454 4.6E-51 T 11-10-2018 AMS64_00785 f083e4c0f9b2f5af106efeecbeeeabae 489 Gene3D G3DSA:1.20.5.570 455 489 5.7E-16 T 11-10-2018 AMS64_00785 f083e4c0f9b2f5af106efeecbeeeabae 489 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 3.0E-166 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AMS64_00785 f083e4c0f9b2f5af106efeecbeeeabae 489 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 72.964 T 11-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AMS64_00785 f083e4c0f9b2f5af106efeecbeeeabae 489 SUPERFAMILY SSF50475 3 322 2.35E-122 T 11-10-2018 AMS64_04700 79105fca685638c983e7bd0155af7741 196 Gene3D G3DSA:3.40.50.300 1 196 2.0E-80 T 11-10-2018 AMS64_04700 79105fca685638c983e7bd0155af7741 196 SUPERFAMILY SSF52540 18 192 5.31E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_04700 79105fca685638c983e7bd0155af7741 196 Pfam PF01583 Adenylylsulphate kinase 24 175 2.1E-72 T 11-10-2018 AMS64_04700 79105fca685638c983e7bd0155af7741 196 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 22 194 38.092 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AMS64_04700 79105fca685638c983e7bd0155af7741 196 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 6 189 2.2E-80 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AMS64_17585 be40681b8d039336d285bbff240539d9 170 Pfam PF01047 MarR family 36 94 7.0E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_17585 be40681b8d039336d285bbff240539d9 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMS64_17585 be40681b8d039336d285bbff240539d9 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 2.9E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_17585 be40681b8d039336d285bbff240539d9 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 2.9E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_17585 be40681b8d039336d285bbff240539d9 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 2.9E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_17585 be40681b8d039336d285bbff240539d9 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 2.9E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_17585 be40681b8d039336d285bbff240539d9 170 SMART SM00347 29 130 3.8E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_17585 be40681b8d039336d285bbff240539d9 170 SUPERFAMILY SSF46785 9 146 4.4E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_17585 be40681b8d039336d285bbff240539d9 170 Gene3D G3DSA:1.10.10.10 9 146 7.4E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 Gene3D G3DSA:3.10.20.30 1 77 2.2E-5 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 TIGRFAM TIGR03313 Se_sel_red_Mo: probable selenate reductase, molybdenum-binding subunit 5 957 0.0 T 11-10-2018 IPR017699 Molybdenum-binding protein YgfN/XdhD AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 PIRSF PIRSF000127 140 346 1.7E-15 T 11-10-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 PIRSF PIRSF000127 355 949 2.5E-71 T 11-10-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 PIRSF PIRSF000127 52 161 0.012 T 11-10-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 361 895 1.2E-149 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 Gene3D G3DSA:1.10.150.120 80 152 2.8E-11 T 11-10-2018 AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 Pfam PF01799 [2Fe-2S] binding domain 74 146 1.6E-11 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 SUPERFAMILY SSF56003 303 958 7.59E-166 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 SUPERFAMILY SSF54665 163 318 6.02E-46 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 188 299 2.3E-28 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 SUPERFAMILY SSF47741 85 189 3.27E-18 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AMS64_09000 93520c634fa44b2c18088a80b39ff101 964 SMART SM01008 187 299 3.6E-37 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMS64_11070 d2adf41c4c0cc631ed201bf7423ed9bf 424 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 24 43 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_11070 d2adf41c4c0cc631ed201bf7423ed9bf 424 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 209 219 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_11070 d2adf41c4c0cc631ed201bf7423ed9bf 424 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 19 395 4.0E-153 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_11070 d2adf41c4c0cc631ed201bf7423ed9bf 424 Pfam PF00483 Nucleotidyl transferase 20 289 3.7E-68 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMS64_11070 d2adf41c4c0cc631ed201bf7423ed9bf 424 Gene3D G3DSA:2.160.10.10 299 424 1.6E-36 T 11-10-2018 AMS64_11070 d2adf41c4c0cc631ed201bf7423ed9bf 424 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 111 119 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_11070 d2adf41c4c0cc631ed201bf7423ed9bf 424 Gene3D G3DSA:3.90.550.10 9 298 5.2E-90 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_11070 d2adf41c4c0cc631ed201bf7423ed9bf 424 SUPERFAMILY SSF51161 309 409 5.41E-17 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_11070 d2adf41c4c0cc631ed201bf7423ed9bf 424 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 15 421 51.316 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_11070 d2adf41c4c0cc631ed201bf7423ed9bf 424 SUPERFAMILY SSF53448 19 375 1.6E-76 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_00145 9c32c1c52399bc93395b1ba089969789 621 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 145 4.0E-28 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMS64_00145 9c32c1c52399bc93395b1ba089969789 621 Gene3D G3DSA:2.170.130.10 24 150 4.7E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMS64_00145 9c32c1c52399bc93395b1ba089969789 621 SUPERFAMILY SSF56935 27 620 2.2E-117 T 11-10-2018 AMS64_00145 9c32c1c52399bc93395b1ba089969789 621 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 621 33.959 T 11-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 AMS64_00145 9c32c1c52399bc93395b1ba089969789 621 Gene3D G3DSA:2.40.170.20 153 621 4.5E-122 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMS64_00145 9c32c1c52399bc93395b1ba089969789 621 Pfam PF00593 TonB dependent receptor 228 620 1.7E-53 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMS64_09220 9d5c463e8a1ba933bcc017366bba77d3 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 3.1E-15 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_09220 9d5c463e8a1ba933bcc017366bba77d3 335 Gene3D G3DSA:1.10.260.40 1 61 2.2E-22 T 11-10-2018 AMS64_09220 9d5c463e8a1ba933bcc017366bba77d3 335 SMART SM00354 3 73 1.2E-24 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_09220 9d5c463e8a1ba933bcc017366bba77d3 335 Gene3D G3DSA:3.40.50.2300 163 329 3.3E-75 T 11-10-2018 AMS64_09220 9d5c463e8a1ba933bcc017366bba77d3 335 SUPERFAMILY SSF47413 2 61 1.75E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_09220 9d5c463e8a1ba933bcc017366bba77d3 335 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 321 1.4E-38 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AMS64_09220 9d5c463e8a1ba933bcc017366bba77d3 335 Gene3D G3DSA:3.40.50.2300 64 324 3.3E-75 T 11-10-2018 AMS64_09220 9d5c463e8a1ba933bcc017366bba77d3 335 SUPERFAMILY SSF53822 64 333 7.26E-71 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_14960 80f6480b5e1b647e5f6f8719b23cee7e 958 Gene3D G3DSA:3.90.1150.10 765 898 1.4E-40 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_14960 80f6480b5e1b647e5f6f8719b23cee7e 958 SUPERFAMILY SSF53383 17 437 1.54E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_14960 80f6480b5e1b647e5f6f8719b23cee7e 958 Gene3D G3DSA:3.40.640.10 95 353 1.6E-102 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_14960 80f6480b5e1b647e5f6f8719b23cee7e 958 Gene3D G3DSA:3.40.640.10 523 754 5.2E-59 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_14960 80f6480b5e1b647e5f6f8719b23cee7e 958 SUPERFAMILY SSF53383 474 951 1.2E-97 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_14960 80f6480b5e1b647e5f6f8719b23cee7e 958 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.383 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMS64_14960 80f6480b5e1b647e5f6f8719b23cee7e 958 Pfam PF02347 Glycine cleavage system P-protein 16 438 3.5E-178 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMS64_14960 80f6480b5e1b647e5f6f8719b23cee7e 958 Pfam PF02347 Glycine cleavage system P-protein 612 738 8.4E-7 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMS64_14960 80f6480b5e1b647e5f6f8719b23cee7e 958 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMS64_07140 a00540097029e3e0de0831c2c1e27c59 292 SUPERFAMILY SSF53850 90 277 7.44E-8 T 11-10-2018 AMS64_07140 a00540097029e3e0de0831c2c1e27c59 292 Pfam PF12727 PBP superfamily domain 88 264 8.4E-39 T 11-10-2018 IPR024370 PBP domain AMS64_07140 a00540097029e3e0de0831c2c1e27c59 292 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 4 50 4.8E-9 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 AMS64_07140 a00540097029e3e0de0831c2c1e27c59 292 Pfam PF12728 Helix-turn-helix domain 4 51 2.5E-12 T 11-10-2018 AMS64_04200 cbbb0e3cadef4a5258536d3014a345ca 412 Gene3D G3DSA:1.10.3090.10 122 409 4.8E-46 T 11-10-2018 AMS64_04200 cbbb0e3cadef4a5258536d3014a345ca 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.201 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AMS64_04200 cbbb0e3cadef4a5258536d3014a345ca 412 Pfam PF01966 HD domain 229 327 1.3E-10 T 11-10-2018 IPR006674 HD domain AMS64_04200 cbbb0e3cadef4a5258536d3014a345ca 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.852 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AMS64_04200 cbbb0e3cadef4a5258536d3014a345ca 412 Pfam PF01743 Poly A polymerase head domain 3 122 4.7E-18 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AMS64_04200 cbbb0e3cadef4a5258536d3014a345ca 412 SMART SM00471 224 338 2.3E-5 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_04200 cbbb0e3cadef4a5258536d3014a345ca 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.1E-17 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AMS64_04200 cbbb0e3cadef4a5258536d3014a345ca 412 Gene3D G3DSA:3.30.460.10 1 121 1.2E-27 T 11-10-2018 AMS64_04200 cbbb0e3cadef4a5258536d3014a345ca 412 SUPERFAMILY SSF81301 2 119 1.42E-29 T 11-10-2018 AMS64_04200 cbbb0e3cadef4a5258536d3014a345ca 412 PIRSF PIRSF000813 1 408 6.2E-192 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AMS64_04200 cbbb0e3cadef4a5258536d3014a345ca 412 SUPERFAMILY SSF81891 120 397 3.14E-56 T 11-10-2018 AMS64_14255 6c01257248f8413aa4a7422b8d6c8c1d 223 Pfam PF13394 4Fe-4S single cluster domain 24 129 6.3E-13 T 11-10-2018 AMS64_14255 6c01257248f8413aa4a7422b8d6c8c1d 223 Pfam PF04055 Radical SAM superfamily 26 136 5.9E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_14255 6c01257248f8413aa4a7422b8d6c8c1d 223 PIRSF PIRSF000370 1 223 4.1E-66 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AMS64_14255 6c01257248f8413aa4a7422b8d6c8c1d 223 Gene3D G3DSA:3.20.20.70 2 223 1.7E-53 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_14255 6c01257248f8413aa4a7422b8d6c8c1d 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 1.6E-106 T 11-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AMS64_14255 6c01257248f8413aa4a7422b8d6c8c1d 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 35.927 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AMS64_14255 6c01257248f8413aa4a7422b8d6c8c1d 223 SUPERFAMILY SSF102114 24 119 2.49E-7 T 11-10-2018 AMS64_15355 054850f6a2c24397963c17a4b69e6ba1 378 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 370 2.8E-30 T 11-10-2018 IPR000160 GGDEF domain AMS64_15355 054850f6a2c24397963c17a4b69e6ba1 378 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 372 2.7E-30 T 11-10-2018 IPR000160 GGDEF domain AMS64_15355 054850f6a2c24397963c17a4b69e6ba1 378 SUPERFAMILY SSF55073 231 373 1.02E-33 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_15355 054850f6a2c24397963c17a4b69e6ba1 378 SMART SM00267 215 374 2.4E-41 T 11-10-2018 IPR000160 GGDEF domain AMS64_15355 054850f6a2c24397963c17a4b69e6ba1 378 Gene3D G3DSA:3.30.70.270 219 375 1.1E-41 T 11-10-2018 AMS64_06410 78f6489471a9f247a09a581efe501dee 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 474 2.2E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_06410 78f6489471a9f247a09a581efe501dee 480 SUPERFAMILY SSF47384 241 323 1.37E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_06410 78f6489471a9f247a09a581efe501dee 480 Gene3D G3DSA:1.10.287.130 209 325 1.2E-16 T 11-10-2018 AMS64_06410 78f6489471a9f247a09a581efe501dee 480 SMART SM00388 258 323 8.1E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_06410 78f6489471a9f247a09a581efe501dee 480 Pfam PF08521 Two-component sensor kinase N-terminal 22 180 1.8E-8 T 11-10-2018 IPR013727 Two-component sensor kinase, N-terminal AMS64_06410 78f6489471a9f247a09a581efe501dee 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 432 1.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_06410 78f6489471a9f247a09a581efe501dee 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 473 1.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_06410 78f6489471a9f247a09a581efe501dee 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 418 1.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_06410 78f6489471a9f247a09a581efe501dee 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 1.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_06410 78f6489471a9f247a09a581efe501dee 480 Gene3D G3DSA:3.30.565.10 329 479 7.7E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_06410 78f6489471a9f247a09a581efe501dee 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 322 9.2E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_06410 78f6489471a9f247a09a581efe501dee 480 SUPERFAMILY SSF55874 313 476 5.24E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_06410 78f6489471a9f247a09a581efe501dee 480 SMART SM00387 367 476 1.3E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_07185 83368b5f5ae0679e51035000e97ee4d0 323 Gene3D G3DSA:1.20.950.20 104 319 6.3E-61 T 11-10-2018 AMS64_07185 83368b5f5ae0679e51035000e97ee4d0 323 SUPERFAMILY SSF81342 105 312 4.94E-44 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMS64_07185 83368b5f5ae0679e51035000e97ee4d0 323 Pfam PF01292 Prokaryotic cytochrome b561 111 292 3.5E-21 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMS64_07185 83368b5f5ae0679e51035000e97ee4d0 323 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 108 312 2.6E-68 T 11-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AMS64_19820 6b41774a22899c020f3e9187d45fee4a 147 SUPERFAMILY SSF89095 2 146 5.23E-41 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AMS64_19820 6b41774a22899c020f3e9187d45fee4a 147 Gene3D G3DSA:1.10.10.410 91 147 6.0E-19 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AMS64_19820 6b41774a22899c020f3e9187d45fee4a 147 Pfam PF09424 Yqey-like protein 4 146 4.1E-55 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 AMS64_19820 6b41774a22899c020f3e9187d45fee4a 147 Gene3D G3DSA:1.10.1510.10 1 90 8.0E-28 T 11-10-2018 AMS64_14675 7c6fce1d2df6f0bb9270aad6c2f757eb 383 SUPERFAMILY SSF51182 81 376 3.62E-87 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_14675 7c6fce1d2df6f0bb9270aad6c2f757eb 383 Pfam PF04209 homogentisate 1,2-dioxygenase 105 375 2.0E-17 T 11-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AMS64_14675 7c6fce1d2df6f0bb9270aad6c2f757eb 383 Gene3D G3DSA:2.60.120.10 66 166 3.2E-11 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_19250 2282ce1b49828cbd0c099b755abe00af 344 SUPERFAMILY SSF52540 111 334 3.02E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19250 2282ce1b49828cbd0c099b755abe00af 344 Pfam PF03193 RsgA GTPase 97 272 5.3E-58 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AMS64_19250 2282ce1b49828cbd0c099b755abe00af 344 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 336 37.585 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AMS64_19250 2282ce1b49828cbd0c099b755abe00af 344 Gene3D G3DSA:3.40.50.300 100 271 1.0E-51 T 11-10-2018 AMS64_19250 2282ce1b49828cbd0c099b755abe00af 344 Gene3D G3DSA:1.10.40.50 272 343 4.5E-24 T 11-10-2018 AMS64_19250 2282ce1b49828cbd0c099b755abe00af 344 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 330 6.3E-87 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AMS64_19250 2282ce1b49828cbd0c099b755abe00af 344 Gene3D G3DSA:2.40.50.140 35 99 1.1E-19 T 11-10-2018 AMS64_13570 67b32889248c79b7589363e562520f31 115 SUPERFAMILY SSF54285 4 79 1.15E-24 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMS64_13570 67b32889248c79b7589363e562520f31 115 Gene3D G3DSA:3.10.20.280 1 89 6.7E-33 T 11-10-2018 IPR037021 RnfH superfamily AMS64_13570 67b32889248c79b7589363e562520f31 115 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 24.005 T 11-10-2018 IPR005346 RnfH protein AMS64_13570 67b32889248c79b7589363e562520f31 115 Pfam PF03658 RnfH family Ubiquitin 6 87 2.3E-33 T 11-10-2018 IPR005346 RnfH protein AMS64_05865 6f86bb0e2041e6ae838e7befa6c36364 693 Pfam PF05954 Phage late control gene D protein (GPD) 30 327 1.7E-88 T 11-10-2018 AMS64_05865 6f86bb0e2041e6ae838e7befa6c36364 693 SUPERFAMILY SSF69255 367 454 2.46E-33 T 11-10-2018 AMS64_05865 6f86bb0e2041e6ae838e7befa6c36364 693 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 524 1.5E-206 T 11-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AMS64_05865 6f86bb0e2041e6ae838e7befa6c36364 693 Gene3D G3DSA:3.55.50.10 98 189 5.1E-93 T 11-10-2018 AMS64_05865 6f86bb0e2041e6ae838e7befa6c36364 693 SUPERFAMILY SSF69279 14 185 1.53E-55 T 11-10-2018 AMS64_05865 6f86bb0e2041e6ae838e7befa6c36364 693 Gene3D G3DSA:2.40.50.230 359 459 1.0E-41 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AMS64_05865 6f86bb0e2041e6ae838e7befa6c36364 693 SUPERFAMILY SSF69279 197 359 2.72E-43 T 11-10-2018 AMS64_05865 6f86bb0e2041e6ae838e7befa6c36364 693 Gene3D G3DSA:2.30.110.50 21 329 5.1E-93 T 11-10-2018 AMS64_05865 6f86bb0e2041e6ae838e7befa6c36364 693 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 7.1E-148 T 11-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AMS64_05865 6f86bb0e2041e6ae838e7befa6c36364 693 SUPERFAMILY SSF69349 445 638 1.96E-45 T 11-10-2018 AMS64_05865 6f86bb0e2041e6ae838e7befa6c36364 693 Gene3D G3DSA:3.30.1920.30 221 284 5.1E-93 T 11-10-2018 AMS64_04295 ce3849444c2b64358fdf2180e370da0d 236 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 137 161 1.3E-5 T 11-10-2018 AMS64_04295 ce3849444c2b64358fdf2180e370da0d 236 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 107 119 1.3E-5 T 11-10-2018 AMS64_04295 ce3849444c2b64358fdf2180e370da0d 236 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 42 56 1.3E-5 T 11-10-2018 AMS64_04295 ce3849444c2b64358fdf2180e370da0d 236 Gene3D G3DSA:3.40.50.150 3 231 2.3E-59 T 11-10-2018 AMS64_04295 ce3849444c2b64358fdf2180e370da0d 236 Pfam PF05175 Methyltransferase small domain 37 132 2.0E-13 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AMS64_04295 ce3849444c2b64358fdf2180e370da0d 236 SUPERFAMILY SSF53335 5 169 1.66E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_04295 ce3849444c2b64358fdf2180e370da0d 236 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 110 116 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMS64_04295 ce3849444c2b64358fdf2180e370da0d 236 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 5 236 54.125 T 11-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 AMS64_15270 37eece2cdb5af2a762d0136a19e6179c 302 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 95 273 1.2E-49 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMS64_15270 37eece2cdb5af2a762d0136a19e6179c 302 Gene3D G3DSA:1.20.1640.10 97 296 1.4E-11 T 11-10-2018 AMS64_15270 37eece2cdb5af2a762d0136a19e6179c 302 PRINTS PR01755 Bacterial translocase SecF protein signature 32 47 8.2E-24 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMS64_15270 37eece2cdb5af2a762d0136a19e6179c 302 PRINTS PR01755 Bacterial translocase SecF protein signature 224 239 8.2E-24 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMS64_15270 37eece2cdb5af2a762d0136a19e6179c 302 PRINTS PR01755 Bacterial translocase SecF protein signature 192 210 8.2E-24 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMS64_15270 37eece2cdb5af2a762d0136a19e6179c 302 PRINTS PR01755 Bacterial translocase SecF protein signature 144 158 8.2E-24 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMS64_15270 37eece2cdb5af2a762d0136a19e6179c 302 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 5 287 21.734 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMS64_15270 37eece2cdb5af2a762d0136a19e6179c 302 SUPERFAMILY SSF82866 118 283 8.89E-33 T 11-10-2018 AMS64_15270 37eece2cdb5af2a762d0136a19e6179c 302 Pfam PF07549 SecD/SecF GG Motif 28 48 7.1E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMS64_15270 37eece2cdb5af2a762d0136a19e6179c 302 Pfam PF02355 Protein export membrane protein 105 280 1.1E-53 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMS64_15270 37eece2cdb5af2a762d0136a19e6179c 302 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 33 276 1.6E-59 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMS64_05650 d98755027ee8ce6ec089e3f83c698220 247 SUPERFAMILY SSF53850 23 233 4.45E-19 T 11-10-2018 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 Gene3D G3DSA:3.40.50.300 571 782 1.4E-60 T 11-10-2018 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 SMART SM00382 618 754 1.0E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 SMART SM00382 217 363 1.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 Gene3D G3DSA:3.40.50.300 367 565 1.1E-45 T 11-10-2018 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 SUPERFAMILY SSF52540 180 565 5.42E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 729 743 7.7E-29 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 696 714 7.7E-29 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 667 685 7.7E-29 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 622 640 7.7E-29 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 Gene3D G3DSA:1.10.8.60 784 879 4.1E-7 T 11-10-2018 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 SMART SM01086 784 876 7.5E-8 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 SUPERFAMILY SSF52540 567 848 3.89E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 Pfam PF07724 AAA domain (Cdc48 subfamily) 617 778 6.1E-37 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 Gene3D G3DSA:3.40.50.300 177 366 1.6E-57 T 11-10-2018 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 SUPERFAMILY SSF81923 11 125 5.23E-12 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 Gene3D G3DSA:1.10.1780.10 5 159 1.8E-37 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 868 0.0 T 11-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 652 670 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 318 1.7E-7 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_11280 b73565f9fa0c907ee699254863b240ac 880 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 784 857 1.2E-8 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMS64_07155 d46a53d5c37f3a476a8fd50d70abc9af 197 Pfam PF11748 Protein of unknown function (DUF3306) 3 117 8.8E-17 T 11-10-2018 IPR021735 Protein of unknown function DUF3306 AMS64_17845 68e8781bfd37e0276fd9d1e912c59106 421 Pfam PF01042 Endoribonuclease L-PSP 312 410 5.2E-23 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMS64_17845 68e8781bfd37e0276fd9d1e912c59106 421 Pfam PF01042 Endoribonuclease L-PSP 14 128 3.9E-25 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMS64_17845 68e8781bfd37e0276fd9d1e912c59106 421 Pfam PF01042 Endoribonuclease L-PSP 173 272 8.2E-22 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMS64_17845 68e8781bfd37e0276fd9d1e912c59106 421 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 11 129 5.8E-32 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 AMS64_17845 68e8781bfd37e0276fd9d1e912c59106 421 SUPERFAMILY SSF55298 8 137 5.18E-37 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_17845 68e8781bfd37e0276fd9d1e912c59106 421 Gene3D G3DSA:3.30.1330.40 2 133 6.6E-38 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_17845 68e8781bfd37e0276fd9d1e912c59106 421 Gene3D G3DSA:3.30.1330.40 289 417 2.6E-33 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_17845 68e8781bfd37e0276fd9d1e912c59106 421 SUPERFAMILY SSF55298 145 280 6.91E-30 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_17845 68e8781bfd37e0276fd9d1e912c59106 421 SUPERFAMILY SSF55298 290 415 5.34E-32 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_17845 68e8781bfd37e0276fd9d1e912c59106 421 Gene3D G3DSA:3.30.1330.40 145 273 1.5E-30 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_22235 89eacb010764a1216e32e501a6ea542b 163 SUPERFAMILY SSF55252 90 154 3.14E-15 T 11-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 AMS64_22235 89eacb010764a1216e32e501a6ea542b 163 SUPERFAMILY SSF46785 16 80 4.53E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_22235 89eacb010764a1216e32e501a6ea542b 163 Pfam PF01316 Arginine repressor, DNA binding domain 21 80 1.4E-14 T 11-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AMS64_22235 89eacb010764a1216e32e501a6ea542b 163 PRINTS PR01467 Bacterial arginine repressor signature 98 111 3.5E-16 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMS64_22235 89eacb010764a1216e32e501a6ea542b 163 PRINTS PR01467 Bacterial arginine repressor signature 128 143 3.5E-16 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMS64_22235 89eacb010764a1216e32e501a6ea542b 163 PRINTS PR01467 Bacterial arginine repressor signature 49 64 3.5E-16 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMS64_22235 89eacb010764a1216e32e501a6ea542b 163 PRINTS PR01467 Bacterial arginine repressor signature 32 45 3.5E-16 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMS64_22235 89eacb010764a1216e32e501a6ea542b 163 Gene3D G3DSA:1.10.10.10 9 82 1.2E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_22235 89eacb010764a1216e32e501a6ea542b 163 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 97 159 3.0E-7 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AMS64_22235 89eacb010764a1216e32e501a6ea542b 163 Pfam PF02863 Arginine repressor, C-terminal domain 91 149 1.3E-16 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AMS64_22235 89eacb010764a1216e32e501a6ea542b 163 Gene3D G3DSA:3.30.1360.40 83 162 2.5E-22 T 11-10-2018 AMS64_22235 89eacb010764a1216e32e501a6ea542b 163 Hamap MF_00173 Arginine repressor [argR]. 1 162 40.455 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMS64_08090 b187c128b9d246ea79857ebd7a168efd 268 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 237 257 1.4E-5 T 11-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 AMS64_08090 b187c128b9d246ea79857ebd7a168efd 268 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 28 257 4.9E-79 T 11-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family AMS64_02815 fdc7fc6e363319a940e6f1e7f40f4566 175 Pfam PF03968 OstA-like protein 29 139 4.9E-26 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AMS64_02815 fdc7fc6e363319a940e6f1e7f40f4566 175 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 159 20.616 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AMS64_02815 fdc7fc6e363319a940e6f1e7f40f4566 175 Gene3D G3DSA:2.60.450.10 19 156 1.3E-37 T 11-10-2018 AMS64_02815 fdc7fc6e363319a940e6f1e7f40f4566 175 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 19 158 2.9E-44 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AMS64_14275 4c8e1ba5834aca34171ebdb207faed21 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 39.921 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_14275 4c8e1ba5834aca34171ebdb207faed21 233 SMART SM00934 5 226 1.5E-96 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_14275 4c8e1ba5834aca34171ebdb207faed21 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 223 2.4E-51 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_14275 4c8e1ba5834aca34171ebdb207faed21 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 226 2.0E-59 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_14275 4c8e1ba5834aca34171ebdb207faed21 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_14275 4c8e1ba5834aca34171ebdb207faed21 233 SUPERFAMILY SSF51366 3 229 1.64E-76 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMS64_14275 4c8e1ba5834aca34171ebdb207faed21 233 Gene3D G3DSA:3.20.20.70 1 232 3.1E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_11815 7465cea7529d87e2911ada59fa1f4fc0 431 SMART SM00487 20 229 2.8E-59 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_11815 7465cea7529d87e2911ada59fa1f4fc0 431 Pfam PF00270 DEAD/DEAH box helicase 25 196 8.6E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_11815 7465cea7529d87e2911ada59fa1f4fc0 431 Gene3D G3DSA:3.40.50.300 1 211 2.1E-76 T 11-10-2018 AMS64_11815 7465cea7529d87e2911ada59fa1f4fc0 431 Pfam PF00271 Helicase conserved C-terminal domain 232 339 1.2E-28 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_11815 7465cea7529d87e2911ada59fa1f4fc0 431 SUPERFAMILY SSF52540 74 358 1.57E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11815 7465cea7529d87e2911ada59fa1f4fc0 431 SMART SM00490 258 339 1.4E-31 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_11815 7465cea7529d87e2911ada59fa1f4fc0 431 Gene3D G3DSA:3.40.50.300 214 428 1.6E-49 T 11-10-2018 AMS64_11815 7465cea7529d87e2911ada59fa1f4fc0 431 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 Pfam PF00270 DEAD/DEAH box helicase 77 228 1.5E-9 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 Gene3D G3DSA:3.40.50.300 248 423 1.8E-53 T 11-10-2018 AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 SMART SM00490 306 406 6.9E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 SMART SM00847 466 565 7.4E-34 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 Pfam PF04408 Helicase associated domain (HA2) 469 563 8.5E-16 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 SUPERFAMILY SSF52540 69 573 4.8E-111 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 Pfam PF00271 Helicase conserved C-terminal domain 288 405 5.9E-12 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 Gene3D G3DSA:1.20.120.1080 450 559 1.9E-16 T 11-10-2018 AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 SMART SM00487 70 254 3.4E-32 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 629 705 4.9E-19 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 10 1302 0.0 T 11-10-2018 IPR010222 RNA helicase HrpA GO:0004004 AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 SMART SM00382 87 372 2.1E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 Pfam PF11898 Domain of unknown function (DUF3418) 718 1302 9.2E-234 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal AMS64_10085 859d77ee5100ce1dd28e2edc4baadd26 1304 Gene3D G3DSA:3.40.50.300 55 247 1.4E-76 T 11-10-2018 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 Gene3D G3DSA:2.40.50.180 604 665 4.3E-37 T 11-10-2018 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 559 3.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 499 3.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 535 3.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 3.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 Gene3D G3DSA:1.10.287.560 336 395 9.4E-9 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 SUPERFAMILY SSF47384 336 396 2.9E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 Gene3D G3DSA:3.30.565.10 396 580 2.8E-58 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 Gene3D G3DSA:1.20.120.160 1 137 1.2E-37 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 SMART SM00260 573 710 9.4E-29 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 SMART SM01231 335 395 6.3E-14 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 Pfam PF01627 Hpt domain 8 99 1.1E-18 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 443 580 1.1E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 SUPERFAMILY SSF55874 397 579 2.36E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 SUPERFAMILY SSF50341 580 710 3.79E-32 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 337 391 4.7E-8 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 SMART SM00387 440 581 5.3E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 SUPERFAMILY SSF47226 4 110 2.75E-29 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 SMART SM00073 4 102 3.5E-30 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 Pfam PF01584 CheW-like domain 586 712 9.0E-25 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_18715 b5fccc0679dbe88a57641c64989b1c42 736 Gene3D G3DSA:2.30.30.40 581 706 4.3E-37 T 11-10-2018 AMS64_06950 29a9db6a8d9649a5f43dcf2483599f5b 453 Pfam PF01136 Peptidase family U32 75 343 1.3E-96 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AMS64_06950 29a9db6a8d9649a5f43dcf2483599f5b 453 Gene3D G3DSA:2.40.30.10 354 439 2.8E-10 T 11-10-2018 AMS64_06950 29a9db6a8d9649a5f43dcf2483599f5b 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AMS64_06950 29a9db6a8d9649a5f43dcf2483599f5b 453 Pfam PF16325 Peptidase family U32 C-terminal domain 358 438 1.0E-21 T 11-10-2018 IPR032525 Peptidase family U32, C-terminal AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 SUPERFAMILY SSF63737 9 196 3.01E-46 T 11-10-2018 AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 551 873 1.0E-111 T 11-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 Gene3D G3DSA:1.10.1740.60 198 282 7.9E-39 T 11-10-2018 AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 Gene3D G3DSA:1.25.50.10 549 873 2.9E-111 T 11-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 Gene3D G3DSA:2.60.40.1730 18 197 9.2E-70 T 11-10-2018 AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 Pfam PF01433 Peptidase family M1 domain 211 442 8.4E-58 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 447 548 1.7E-33 T 11-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 129 144 2.7E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 179 194 2.7E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 316 328 2.7E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 297 312 2.7E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 261 271 2.7E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 Gene3D G3DSA:1.10.390.10 284 446 3.8E-64 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 SUPERFAMILY SSF55486 207 453 7.51E-75 T 11-10-2018 AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 15 872 0.0 T 11-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AMS64_09520 d792b231f50150345128bf3ffd2d0363 874 Gene3D G3DSA:2.60.40.1840 447 548 3.0E-34 T 11-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily AMS64_19785 6ce99dfed6da441221c0c1f4c61b3ff4 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.117 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMS64_19785 6ce99dfed6da441221c0c1f4c61b3ff4 97 Gene3D G3DSA:2.30.33.40 1 97 1.6E-35 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 AMS64_19785 6ce99dfed6da441221c0c1f4c61b3ff4 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AMS64_19785 6ce99dfed6da441221c0c1f4c61b3ff4 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 2.1E-29 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMS64_19785 6ce99dfed6da441221c0c1f4c61b3ff4 97 SMART SM00883 2 95 2.0E-48 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMS64_19785 6ce99dfed6da441221c0c1f4c61b3ff4 97 SUPERFAMILY SSF50129 1 96 1.88E-30 T 11-10-2018 IPR011032 GroES-like superfamily AMS64_19785 6ce99dfed6da441221c0c1f4c61b3ff4 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.3E-28 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMS64_19785 6ce99dfed6da441221c0c1f4c61b3ff4 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.3E-28 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMS64_19785 6ce99dfed6da441221c0c1f4c61b3ff4 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.3E-28 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMS64_19785 6ce99dfed6da441221c0c1f4c61b3ff4 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.3E-28 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 113.49 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 Gene3D G3DSA:2.40.30.10 304 410 1.4E-45 T 11-10-2018 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 Pfam PF03764 Elongation factor G, domain IV 485 605 1.2E-47 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 SUPERFAMILY SSF54980 610 697 4.6E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 Gene3D G3DSA:3.40.50.300 1 303 1.7E-114 T 11-10-2018 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 Gene3D G3DSA:3.30.70.240 611 681 2.2E-87 T 11-10-2018 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 SUPERFAMILY SSF54211 485 606 1.09E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 SUPERFAMILY SSF50447 271 410 4.42E-36 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 SMART SM00838 607 694 7.9E-57 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 SUPERFAMILY SSF52540 6 287 1.06E-105 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 Gene3D G3DSA:3.30.230.10 490 694 2.2E-87 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 6.9E-66 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 699 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 Pfam PF00679 Elongation factor G C-terminus 607 692 4.7E-30 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 Gene3D G3DSA:3.30.70.870 411 489 2.9E-32 T 11-10-2018 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 2.5E-32 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 SUPERFAMILY SSF54980 410 487 4.68E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 Pfam PF03144 Elongation factor Tu domain 2 330 397 5.0E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 Pfam PF14492 Elongation Factor G, domain II 410 484 8.1E-34 T 11-10-2018 AMS64_21695 262b79ad571992c5fe0ff2ca3c711969 701 SMART SM00889 486 605 6.8E-72 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 Pfam PF01189 16S rRNA methyltransferase RsmB/F 237 427 9.2E-72 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 Gene3D G3DSA:3.30.70.1170 170 227 5.6E-18 T 11-10-2018 AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 429 8.1E-154 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 Gene3D G3DSA:3.40.50.150 228 430 1.9E-69 T 11-10-2018 AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 Gene3D G3DSA:1.10.940.10 1 137 1.0E-44 T 11-10-2018 IPR035926 NusB-like superfamily AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 SUPERFAMILY SSF48013 1 146 4.19E-37 T 11-10-2018 IPR035926 NusB-like superfamily AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 SUPERFAMILY SSF53335 137 429 4.97E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 315 327 2.3E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.3E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 365 381 2.3E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 2.3E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 412 429 2.3E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 Pfam PF01029 NusB family 1 123 2.5E-27 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 Gene3D G3DSA:1.10.287.730 143 169 1.3E-10 T 11-10-2018 AMS64_22355 861cf53c7fe8c7c214593b9e6ae8bb04 430 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 314 325 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 AMS64_06305 550289fcebf6d9457ddfa5a9bf8883c4 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.869 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMS64_06305 550289fcebf6d9457ddfa5a9bf8883c4 154 SUPERFAMILY SSF55486 10 149 1.15E-48 T 11-10-2018 AMS64_06305 550289fcebf6d9457ddfa5a9bf8883c4 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 144 6.4E-37 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMS64_06305 550289fcebf6d9457ddfa5a9bf8883c4 154 Pfam PF02130 Uncharacterized protein family UPF0054 35 143 1.3E-38 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMS64_06305 550289fcebf6d9457ddfa5a9bf8883c4 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site AMS64_06305 550289fcebf6d9457ddfa5a9bf8883c4 154 Gene3D G3DSA:3.40.390.30 1 154 1.4E-59 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 AMS64_08885 a9bd3225f5d33135462b4426eae87ee5 444 Pfam PF17192 MukF middle domain 125 284 3.3E-73 T 11-10-2018 IPR033440 Chromosome partition protein MukF, middle domain AMS64_08885 a9bd3225f5d33135462b4426eae87ee5 444 SUPERFAMILY SSF140570 122 284 2.09E-68 T 11-10-2018 IPR036141 MukF, middle domain superfamily AMS64_08885 a9bd3225f5d33135462b4426eae87ee5 444 Pfam PF17193 MukF C-terminal domain 286 444 2.9E-72 T 11-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain AMS64_08885 a9bd3225f5d33135462b4426eae87ee5 444 Gene3D G3DSA:1.10.225.40 356 444 2.2E-26 T 11-10-2018 IPR038198 MukF, C-terminal domain superfamily AMS64_08885 a9bd3225f5d33135462b4426eae87ee5 444 Gene3D G3DSA:1.10.10.10 29 121 9.3E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_08885 a9bd3225f5d33135462b4426eae87ee5 444 Pfam PF03882 MukF winged-helix domain 11 120 2.4E-48 T 11-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain AMS64_08885 a9bd3225f5d33135462b4426eae87ee5 444 Gene3D G3DSA:1.20.58.590 122 314 1.8E-62 T 11-10-2018 IPR036141 MukF, middle domain superfamily AMS64_08885 a9bd3225f5d33135462b4426eae87ee5 444 SUPERFAMILY SSF46785 14 121 2.01E-38 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_15795 1a92bd7f3a9abf3378d8da30a1e5d146 246 Pfam PF13860 FlgD Ig-like domain 116 180 5.1E-15 T 11-10-2018 IPR025965 FlgD Ig-like domain AMS64_15795 1a92bd7f3a9abf3378d8da30a1e5d146 246 Gene3D G3DSA:2.30.30.910 87 218 1.3E-35 T 11-10-2018 AMS64_15795 1a92bd7f3a9abf3378d8da30a1e5d146 246 Pfam PF03963 Flagellar hook capping protein - N-terminal region 12 77 2.2E-19 T 11-10-2018 IPR005648 Flagellar hook capping protein AMS64_15795 1a92bd7f3a9abf3378d8da30a1e5d146 246 Pfam PF13861 FlgD Tudor-like domain 86 218 5.2E-13 T 11-10-2018 IPR025963 FlgD Tudor-like domain AMS64_15795 1a92bd7f3a9abf3378d8da30a1e5d146 246 Gene3D G3DSA:2.60.40.4070 103 191 1.3E-35 T 11-10-2018 AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 Gene3D G3DSA:3.30.1490.20 131 198 2.0E-78 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 328 6.1E-90 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 Pfam PF07478 D-ala D-ala ligase C-terminus 124 325 5.9E-52 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 SUPERFAMILY SSF56059 115 326 2.16E-45 T 11-10-2018 AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 Pfam PF01820 D-ala D-ala ligase N-terminus 6 105 2.1E-14 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 SUPERFAMILY SSF52440 4 114 6.62E-24 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 271 299 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 PIRSF PIRSF039102 38 329 4.3E-72 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 PIRSF PIRSF039102 1 63 4.8E-4 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 329 32.709 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 Gene3D G3DSA:3.40.50.20 19 325 2.0E-78 T 11-10-2018 AMS64_10985 9bdeb200061c403bfedafb83cab94bad 329 Gene3D G3DSA:3.30.470.20 104 319 2.0E-78 T 11-10-2018 AMS64_10205 9e13ac87db47f6abfe1935abb286aa27 277 SUPERFAMILY SSF53927 24 274 3.91E-74 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMS64_10205 9e13ac87db47f6abfe1935abb286aa27 277 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 275 32.372 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMS64_10205 9e13ac87db47f6abfe1935abb286aa27 277 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 38 274 2.8E-71 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMS64_10205 9e13ac87db47f6abfe1935abb286aa27 277 Gene3D G3DSA:3.40.140.10 131 277 4.7E-45 T 11-10-2018 AMS64_10205 9e13ac87db47f6abfe1935abb286aa27 277 Pfam PF02634 FdhD/NarQ family 40 274 1.4E-71 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMS64_10205 9e13ac87db47f6abfe1935abb286aa27 277 Gene3D G3DSA:3.10.20.10 41 126 3.2E-9 T 11-10-2018 AMS64_10205 9e13ac87db47f6abfe1935abb286aa27 277 PIRSF PIRSF015626 8 277 8.2E-77 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMS64_20450 4c5b1b3075d54f29969d1e342f5e5814 371 Pfam PF05651 Putative sugar diacid recognition 3 136 4.0E-53 T 11-10-2018 IPR008599 Putative sugar diacid recognition AMS64_20450 4c5b1b3075d54f29969d1e342f5e5814 371 Pfam PF13556 PucR C-terminal helix-turn-helix domain 311 368 2.9E-20 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain AMS64_20450 4c5b1b3075d54f29969d1e342f5e5814 371 Gene3D G3DSA:1.10.10.2840 244 371 2.0E-24 T 11-10-2018 AMS64_10980 f5c0ad67018e1ff59580256fe78cb1d4 884 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 6 266 1.0E-39 T 11-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 AMS64_10980 f5c0ad67018e1ff59580256fe78cb1d4 884 Gene3D G3DSA:1.20.1270.50 282 380 4.6E-30 T 11-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 AMS64_10980 f5c0ad67018e1ff59580256fe78cb1d4 884 SUPERFAMILY SSF74650 391 854 1.6E-71 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMS64_10980 f5c0ad67018e1ff59580256fe78cb1d4 884 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 392 831 9.6E-31 T 11-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 AMS64_10980 f5c0ad67018e1ff59580256fe78cb1d4 884 Gene3D G3DSA:2.70.98.30 488 769 2.6E-74 T 11-10-2018 AMS64_10980 f5c0ad67018e1ff59580256fe78cb1d4 884 SUPERFAMILY SSF88688 284 377 2.42E-7 T 11-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily AMS64_10980 f5c0ad67018e1ff59580256fe78cb1d4 884 SUPERFAMILY SSF88713 5 271 9.64E-51 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMS64_10980 f5c0ad67018e1ff59580256fe78cb1d4 884 Gene3D G3DSA:3.20.110.10 1 275 1.2E-99 T 11-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily AMS64_10980 f5c0ad67018e1ff59580256fe78cb1d4 884 Pfam PF09261 Alpha mannosidase middle domain 279 355 4.6E-7 T 11-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 AMS64_10980 f5c0ad67018e1ff59580256fe78cb1d4 884 SMART SM00872 278 356 1.9E-14 T 11-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 AMS64_14620 08b6d885e56c48a29044da2f1fca02c4 511 SUPERFAMILY SSF56176 425 508 9.82E-18 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMS64_14620 08b6d885e56c48a29044da2f1fca02c4 511 Pfam PF03471 Transporter associated domain 431 507 1.4E-17 T 11-10-2018 IPR005170 Transporter-associated domain AMS64_14620 08b6d885e56c48a29044da2f1fca02c4 511 Gene3D G3DSA:3.30.465.10 432 509 4.6E-17 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMS64_14620 08b6d885e56c48a29044da2f1fca02c4 511 Gene3D G3DSA:3.10.580.10 279 431 1.1E-45 T 11-10-2018 AMS64_14620 08b6d885e56c48a29044da2f1fca02c4 511 SMART SM01091 429 510 2.1E-22 T 11-10-2018 IPR005170 Transporter-associated domain AMS64_14620 08b6d885e56c48a29044da2f1fca02c4 511 Pfam PF00571 CBS domain 369 417 0.004 T 11-10-2018 IPR000644 CBS domain AMS64_14620 08b6d885e56c48a29044da2f1fca02c4 511 Pfam PF03741 Integral membrane protein TerC family 14 203 1.9E-47 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AMS64_14620 08b6d885e56c48a29044da2f1fca02c4 511 SMART SM00116 369 417 1.2 T 11-10-2018 IPR000644 CBS domain AMS64_14620 08b6d885e56c48a29044da2f1fca02c4 511 SMART SM00116 307 356 9.0 T 11-10-2018 IPR000644 CBS domain AMS64_14620 08b6d885e56c48a29044da2f1fca02c4 511 SUPERFAMILY SSF54631 286 420 3.54E-25 T 11-10-2018 AMS64_02925 4b202a8358e043bf59c462c378ff04d8 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 4.3E-74 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AMS64_02925 4b202a8358e043bf59c462c378ff04d8 196 SUPERFAMILY SSF50022 30 193 2.62E-45 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMS64_02925 4b202a8358e043bf59c462c378ff04d8 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 9.2E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMS64_02925 4b202a8358e043bf59c462c378ff04d8 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 9.2E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMS64_02925 4b202a8358e043bf59c462c378ff04d8 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 9.2E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMS64_02925 4b202a8358e043bf59c462c378ff04d8 196 Pfam PF00355 Rieske [2Fe-2S] domain 59 176 3.4E-11 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMS64_02925 4b202a8358e043bf59c462c378ff04d8 196 Gene3D G3DSA:2.102.10.10 43 190 7.6E-50 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMS64_02925 4b202a8358e043bf59c462c378ff04d8 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 3 40 4.4E-15 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 SUPERFAMILY SSF52540 152 337 1.34E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 Pfam PF01926 50S ribosome-binding GTPase 161 284 3.1E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.079 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 Pfam PF01018 GTP1/OBG 4 156 7.0E-59 T 11-10-2018 IPR006169 GTP1/OBG domain AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.4E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.4E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.4E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.4E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 Gene3D G3DSA:2.70.210.12 1 158 3.4E-62 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 Gene3D G3DSA:3.40.50.300 159 336 3.1E-51 T 11-10-2018 AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 SUPERFAMILY SSF82051 2 157 5.49E-57 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 PIRSF PIRSF002401 1 375 1.7E-140 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type AMS64_19375 f4ce8a1789e4c0b5408b778c67b29403 400 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 6.0E-146 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMS64_07425 7cee3fd49073864c3078dbdef4603774 125 Pfam PF10975 Protein of unknown function (DUF2802) 55 122 4.7E-25 T 11-10-2018 IPR021244 Protein of unknown function DUF2802 AMS64_17755 0ac06a2b8852cf2900166826f311db73 286 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 51.472 T 11-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AMS64_17755 0ac06a2b8852cf2900166826f311db73 286 SUPERFAMILY SSF53613 1 277 1.29E-69 T 11-10-2018 IPR029056 Ribokinase-like AMS64_17755 0ac06a2b8852cf2900166826f311db73 286 Gene3D G3DSA:3.40.1190.20 1 286 3.4E-85 T 11-10-2018 IPR029056 Ribokinase-like AMS64_17755 0ac06a2b8852cf2900166826f311db73 286 Pfam PF08543 Phosphomethylpyrimidine kinase 76 259 2.3E-15 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AMS64_17755 0ac06a2b8852cf2900166826f311db73 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 3.1E-110 T 11-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AMS64_13470 6acc00448aa90c4571c3a70509000337 168 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 11 152 5.6E-30 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_13470 6acc00448aa90c4571c3a70509000337 168 SMART SM00852 14 158 1.1E-21 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_13470 6acc00448aa90c4571c3a70509000337 168 SUPERFAMILY SSF53218 4 167 4.19E-40 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMS64_13470 6acc00448aa90c4571c3a70509000337 168 Gene3D G3DSA:3.40.980.10 2 168 1.0E-44 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMS64_13470 6acc00448aa90c4571c3a70509000337 168 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 8 168 3.2E-72 T 11-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AMS64_13470 6acc00448aa90c4571c3a70509000337 168 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.6E-26 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_13470 6acc00448aa90c4571c3a70509000337 168 PIRSF PIRSF006443 1 166 7.1E-56 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 SUPERFAMILY SSF53697 5 547 1.7E-227 T 11-10-2018 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 8.0E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 8.0E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 8.0E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 8.0E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 8.0E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 8.0E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 Pfam PF00342 Phosphoglucose isomerase 52 541 9.6E-255 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 Gene3D G3DSA:3.40.50.10490 103 289 2.7E-90 T 11-10-2018 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.557 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 Gene3D G3DSA:3.40.50.10490 1 102 2.8E-35 T 11-10-2018 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 Gene3D G3DSA:1.10.1390.10 507 547 1.4E-18 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_01015 49a844b23e4d06568060074a1ed7f298 549 Gene3D G3DSA:3.40.50.10490 290 506 2.9E-111 T 11-10-2018 AMS64_13380 366676b1119566e4ea6cb4a2551f3dbb 551 SMART SM00304 275 327 74.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13380 366676b1119566e4ea6cb4a2551f3dbb 551 SMART SM00304 215 274 1.9E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13380 366676b1119566e4ea6cb4a2551f3dbb 551 Gene3D G3DSA:1.10.287.950 214 551 6.6E-76 T 11-10-2018 AMS64_13380 366676b1119566e4ea6cb4a2551f3dbb 551 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 184 1.1E-17 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMS64_13380 366676b1119566e4ea6cb4a2551f3dbb 551 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 515 8.9E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_13380 366676b1119566e4ea6cb4a2551f3dbb 551 SMART SM00283 289 550 3.3E-79 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_13380 366676b1119566e4ea6cb4a2551f3dbb 551 SUPERFAMILY SSF58104 250 551 8.63E-76 T 11-10-2018 AMS64_13380 366676b1119566e4ea6cb4a2551f3dbb 551 Pfam PF00672 HAMP domain 215 270 5.1E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 551 580 7.2E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 549 7.2E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 7.2E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 496 651 4.3E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 SMART SM00304 355 409 3.4E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 SMART SM00304 444 511 90.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 Pfam PF02743 Cache domain 40 305 2.8E-16 T 11-10-2018 IPR033479 Double Cache domain 1 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 Gene3D G3DSA:3.30.450.20 63 219 9.1E-43 T 11-10-2018 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 SUPERFAMILY SSF58104 377 686 1.31E-73 T 11-10-2018 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 Pfam PF00672 HAMP domain 356 406 3.9E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 Gene3D G3DSA:3.30.450.20 53 288 9.1E-43 T 11-10-2018 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 SMART SM00283 424 685 5.6E-63 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_13385 fd28bf93778c92148d41a66ea92bfb39 686 Gene3D G3DSA:1.10.287.950 355 686 7.3E-70 T 11-10-2018 AMS64_17435 0d7315c86bf75e8b3fc7a66cf41c337c 459 PIRSF PIRSF006603 8 458 3.5E-62 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_17435 0d7315c86bf75e8b3fc7a66cf41c337c 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 422 1.7E-56 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_17435 0d7315c86bf75e8b3fc7a66cf41c337c 459 Pfam PF01554 MatE 26 185 4.9E-27 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_17435 0d7315c86bf75e8b3fc7a66cf41c337c 459 Pfam PF01554 MatE 253 416 2.0E-17 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_13025 01183b9a256663527bd44ef2d111df94 361 Gene3D G3DSA:1.10.287.470 101 204 9.2E-22 T 11-10-2018 AMS64_13025 01183b9a256663527bd44ef2d111df94 361 Pfam PF13437 HlyD family secretion protein 204 279 1.1E-4 T 11-10-2018 AMS64_13025 01183b9a256663527bd44ef2d111df94 361 Gene3D G3DSA:2.40.50.100 78 234 9.2E-22 T 11-10-2018 AMS64_13025 01183b9a256663527bd44ef2d111df94 361 Gene3D G3DSA:2.40.30.170 236 282 9.2E-22 T 11-10-2018 AMS64_07560 6e8c8d6ef706326812a12563c3720190 546 SUPERFAMILY SSF55729 143 283 2.2E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_07560 6e8c8d6ef706326812a12563c3720190 546 Pfam PF13302 Acetyltransferase (GNAT) domain 144 279 1.6E-24 T 11-10-2018 IPR000182 GNAT domain AMS64_07560 6e8c8d6ef706326812a12563c3720190 546 Gene3D G3DSA:3.40.630.30 139 296 7.9E-28 T 11-10-2018 AMS64_18330 7646f92231beede9432ef1e2ec1c29ca 295 SMART SM00422 17 86 1.5E-20 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_18330 7646f92231beede9432ef1e2ec1c29ca 295 Gene3D G3DSA:1.10.1660.10 11 84 1.1E-25 T 11-10-2018 AMS64_18330 7646f92231beede9432ef1e2ec1c29ca 295 SUPERFAMILY SSF46955 17 105 1.33E-19 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMS64_18330 7646f92231beede9432ef1e2ec1c29ca 295 Pfam PF13411 MerR HTH family regulatory protein 17 85 4.4E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_22610 295b8eb04df1a463eb3eafcc9a1adde5 329 Pfam PF01636 Phosphotransferase enzyme family 36 257 3.0E-44 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AMS64_22610 295b8eb04df1a463eb3eafcc9a1adde5 329 Gene3D G3DSA:3.30.200.70 14 109 1.8E-128 T 11-10-2018 AMS64_22610 295b8eb04df1a463eb3eafcc9a1adde5 329 Hamap MF_01497 Stress response kinase A [srkA]. 5 319 47.758 T 11-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 AMS64_22610 295b8eb04df1a463eb3eafcc9a1adde5 329 Gene3D G3DSA:1.20.1270.170 150 308 1.8E-128 T 11-10-2018 AMS64_22610 295b8eb04df1a463eb3eafcc9a1adde5 329 Gene3D G3DSA:1.10.510.10 61 259 1.8E-128 T 11-10-2018 AMS64_22610 295b8eb04df1a463eb3eafcc9a1adde5 329 SUPERFAMILY SSF56112 5 329 3.79E-91 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMS64_20195 46b27be6c8eb5a326e0993dc64a407f4 324 Pfam PF06574 FAD synthetase 12 166 8.2E-54 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AMS64_20195 46b27be6c8eb5a326e0993dc64a407f4 324 PIRSF PIRSF004491 1 310 8.6E-105 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AMS64_20195 46b27be6c8eb5a326e0993dc64a407f4 324 SUPERFAMILY SSF52374 15 175 1.9E-32 T 11-10-2018 AMS64_20195 46b27be6c8eb5a326e0993dc64a407f4 324 Gene3D G3DSA:2.40.30.30 188 305 3.6E-40 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AMS64_20195 46b27be6c8eb5a326e0993dc64a407f4 324 Gene3D G3DSA:3.40.50.620 1 186 1.7E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_20195 46b27be6c8eb5a326e0993dc64a407f4 324 SUPERFAMILY SSF82114 174 308 3.49E-46 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AMS64_20195 46b27be6c8eb5a326e0993dc64a407f4 324 Pfam PF01687 Riboflavin kinase 184 305 2.6E-37 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AMS64_20195 46b27be6c8eb5a326e0993dc64a407f4 324 SMART SM00904 183 306 3.9E-64 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AMS64_20195 46b27be6c8eb5a326e0993dc64a407f4 324 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 305 1.9E-101 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AMS64_00545 87f263a3e91d47a269d78f40dba9d6cd 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 1.3E-15 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_00545 87f263a3e91d47a269d78f40dba9d6cd 513 SUPERFAMILY SSF50615 10 94 2.88E-26 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_00545 87f263a3e91d47a269d78f40dba9d6cd 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.003 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00545 87f263a3e91d47a269d78f40dba9d6cd 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 5.5E-44 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00545 87f263a3e91d47a269d78f40dba9d6cd 513 SUPERFAMILY SSF47917 383 511 4.97E-44 T 11-10-2018 AMS64_00545 87f263a3e91d47a269d78f40dba9d6cd 513 SUPERFAMILY SSF52540 96 381 3.72E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00545 87f263a3e91d47a269d78f40dba9d6cd 513 Gene3D G3DSA:3.40.50.300 94 382 1.1E-133 T 11-10-2018 AMS64_00545 87f263a3e91d47a269d78f40dba9d6cd 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.8E-74 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_00545 87f263a3e91d47a269d78f40dba9d6cd 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.0E-254 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00545 87f263a3e91d47a269d78f40dba9d6cd 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_00545 87f263a3e91d47a269d78f40dba9d6cd 513 Gene3D G3DSA:2.40.30.20 1 93 2.3E-30 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_00545 87f263a3e91d47a269d78f40dba9d6cd 513 Gene3D G3DSA:1.20.150.20 383 513 1.0E-46 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00670 b5de1a15a053bbc924bc20e492fe1f59 421 Gene3D G3DSA:3.20.20.140 51 358 2.9E-178 T 11-10-2018 AMS64_00670 b5de1a15a053bbc924bc20e492fe1f59 421 Pfam PF07969 Amidohydrolase family 38 399 8.9E-54 T 11-10-2018 IPR013108 Amidohydrolase 3 AMS64_00670 b5de1a15a053bbc924bc20e492fe1f59 421 Gene3D G3DSA:2.30.40.10 6 405 2.9E-178 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_00670 b5de1a15a053bbc924bc20e492fe1f59 421 SUPERFAMILY SSF51556 50 370 1.05E-107 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_00670 b5de1a15a053bbc924bc20e492fe1f59 421 SUPERFAMILY SSF51338 10 405 9.81E-6 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_09380 0d3bda1256848540be2c20fc8602ba59 310 Gene3D G3DSA:3.40.1190.20 1 310 1.7E-104 T 11-10-2018 IPR029056 Ribokinase-like AMS64_09380 0d3bda1256848540be2c20fc8602ba59 310 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.047 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AMS64_09380 0d3bda1256848540be2c20fc8602ba59 310 Pfam PF00294 pfkB family carbohydrate kinase 1 292 5.2E-73 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AMS64_09380 0d3bda1256848540be2c20fc8602ba59 310 PRINTS PR00990 Ribokinase signature 173 188 8.0E-36 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMS64_09380 0d3bda1256848540be2c20fc8602ba59 310 PRINTS PR00990 Ribokinase signature 105 118 8.0E-36 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMS64_09380 0d3bda1256848540be2c20fc8602ba59 310 PRINTS PR00990 Ribokinase signature 217 228 8.0E-36 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMS64_09380 0d3bda1256848540be2c20fc8602ba59 310 PRINTS PR00990 Ribokinase signature 33 52 8.0E-36 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMS64_09380 0d3bda1256848540be2c20fc8602ba59 310 PRINTS PR00990 Ribokinase signature 6 27 8.0E-36 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMS64_09380 0d3bda1256848540be2c20fc8602ba59 310 SUPERFAMILY SSF53613 1 302 7.95E-86 T 11-10-2018 IPR029056 Ribokinase-like AMS64_09380 0d3bda1256848540be2c20fc8602ba59 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMS64_09380 0d3bda1256848540be2c20fc8602ba59 310 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 1.1E-111 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AMS64_21245 8857da179568199a1b3cf06c7270aefb 546 Pfam PF02384 N-6 DNA Methylase 137 516 1.5E-53 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AMS64_21245 8857da179568199a1b3cf06c7270aefb 546 Gene3D G3DSA:1.20.1260.30 1 160 5.2E-21 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AMS64_21245 8857da179568199a1b3cf06c7270aefb 546 Gene3D G3DSA:3.40.50.150 161 525 7.4E-72 T 11-10-2018 AMS64_21245 8857da179568199a1b3cf06c7270aefb 546 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 299 305 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMS64_21245 8857da179568199a1b3cf06c7270aefb 546 Pfam PF12161 HsdM N-terminal domain 6 129 2.4E-13 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AMS64_21245 8857da179568199a1b3cf06c7270aefb 546 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 296 308 1.1E-17 T 11-10-2018 AMS64_21245 8857da179568199a1b3cf06c7270aefb 546 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 184 198 1.1E-17 T 11-10-2018 AMS64_21245 8857da179568199a1b3cf06c7270aefb 546 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 326 350 1.1E-17 T 11-10-2018 AMS64_21245 8857da179568199a1b3cf06c7270aefb 546 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 158 174 1.1E-17 T 11-10-2018 AMS64_21245 8857da179568199a1b3cf06c7270aefb 546 SUPERFAMILY SSF53335 5 546 3.4E-113 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_09195 f95a4c05360ffca137f1deac50e5eca3 360 Hamap MF_02040 Iron-sulfur cluster carrier protein. 87 339 36.075 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein AMS64_09195 f95a4c05360ffca137f1deac50e5eca3 360 SUPERFAMILY SSF52540 89 320 2.11E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09195 f95a4c05360ffca137f1deac50e5eca3 360 SUPERFAMILY SSF117916 4 73 2.19E-5 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMS64_09195 f95a4c05360ffca137f1deac50e5eca3 360 Gene3D G3DSA:3.40.50.300 86 333 1.4E-81 T 11-10-2018 AMS64_09195 f95a4c05360ffca137f1deac50e5eca3 360 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 95 338 1.1E-99 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AMS64_09195 f95a4c05360ffca137f1deac50e5eca3 360 ProSitePatterns PS01215 Mrp family signature. 202 218 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 AMS64_04730 37501df842d117efb983a11eb5f0e3c0 229 Gene3D G3DSA:3.40.50.300 3 218 1.1E-54 T 11-10-2018 AMS64_04730 37501df842d117efb983a11eb5f0e3c0 229 SMART SM00382 31 224 7.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_04730 37501df842d117efb983a11eb5f0e3c0 229 Pfam PF00005 ABC transporter 26 176 6.6E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_04730 37501df842d117efb983a11eb5f0e3c0 229 SUPERFAMILY SSF52540 27 211 1.89E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09835 b0e0e335975883d21975e47042fd0321 173 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 7.1E-17 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AMS64_02890 3653ea55a5df9e6dc2c5661505c50d4e 119 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 3 111 2.6E-44 T 11-10-2018 IPR020044 PRD domain protein, EF0829/AHA3910 AMS64_02890 3653ea55a5df9e6dc2c5661505c50d4e 119 SUPERFAMILY SSF63520 22 111 1.57E-7 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 AMS64_02890 3653ea55a5df9e6dc2c5661505c50d4e 119 Gene3D G3DSA:1.10.1790.10 1 112 1.6E-33 T 11-10-2018 AMS64_03105 3600a644dd87761ccd6b9965f03cc711 244 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 220 1.6E-56 T 11-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 AMS64_03105 3600a644dd87761ccd6b9965f03cc711 244 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 1.5E-34 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMS64_03105 3600a644dd87761ccd6b9965f03cc711 244 Pfam PF00460 Flagella basal body rod protein 5 35 4.7E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMS64_03105 3600a644dd87761ccd6b9965f03cc711 244 SUPERFAMILY SSF117143 78 199 1.06E-16 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMS64_03105 3600a644dd87761ccd6b9965f03cc711 244 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 168 236 1.8E-17 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMS64_17710 e7615e4971b5c65e21476d16c4fdfc6c 198 SUPERFAMILY SSF46689 3 70 1.12E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_17710 e7615e4971b5c65e21476d16c4fdfc6c 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_17710 e7615e4971b5c65e21476d16c4fdfc6c 198 Gene3D G3DSA:1.10.10.60 1 47 1.8E-19 T 11-10-2018 AMS64_17710 e7615e4971b5c65e21476d16c4fdfc6c 198 Gene3D G3DSA:1.10.357.10 49 196 1.1E-18 T 11-10-2018 AMS64_17710 e7615e4971b5c65e21476d16c4fdfc6c 198 SUPERFAMILY SSF48498 81 176 1.27E-12 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMS64_04705 a280ba5a43aa03d1633868ca2a2000a5 285 Pfam PF10987 Protein of unknown function (DUF2806) 65 273 6.9E-44 T 11-10-2018 IPR021254 Protein of unknown function DUF2806 AMS64_15845 7390b1e02a87015d55b1a9884985d5ca 299 Pfam PF00892 EamA-like transporter family 155 294 8.6E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_15845 7390b1e02a87015d55b1a9884985d5ca 299 Pfam PF00892 EamA-like transporter family 4 135 1.7E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_15845 7390b1e02a87015d55b1a9884985d5ca 299 SUPERFAMILY SSF103481 36 140 1.96E-12 T 11-10-2018 AMS64_15845 7390b1e02a87015d55b1a9884985d5ca 299 SUPERFAMILY SSF103481 208 297 8.89E-12 T 11-10-2018 AMS64_17505 1eb32adad39227dda89162df05d2b72c 241 SUPERFAMILY SSF110395 4 239 8.63E-71 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 AMS64_17505 1eb32adad39227dda89162df05d2b72c 241 Gene3D G3DSA:3.20.20.380 2 241 1.1E-82 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 AMS64_17505 1eb32adad39227dda89162df05d2b72c 241 Pfam PF03932 CutC family 4 201 2.4E-74 T 11-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AMS64_17505 1eb32adad39227dda89162df05d2b72c 241 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 204 29.185 T 11-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 AMS64_08055 01a8340d9746ca6b8c4d37fd48e59514 345 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 177 273 1.2E-19 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMS64_08055 01a8340d9746ca6b8c4d37fd48e59514 345 SUPERFAMILY SSF51197 3 283 6.11E-77 T 11-10-2018 AMS64_08055 01a8340d9746ca6b8c4d37fd48e59514 345 Gene3D G3DSA:2.60.120.330 5 304 4.9E-76 T 11-10-2018 IPR027443 Isopenicillin N synthase-like AMS64_08055 01a8340d9746ca6b8c4d37fd48e59514 345 PRINTS PR00682 Isopenicillin N synthase signature 234 260 2.7E-10 T 11-10-2018 AMS64_08055 01a8340d9746ca6b8c4d37fd48e59514 345 PRINTS PR00682 Isopenicillin N synthase signature 28 45 2.7E-10 T 11-10-2018 AMS64_08055 01a8340d9746ca6b8c4d37fd48e59514 345 PRINTS PR00682 Isopenicillin N synthase signature 199 220 2.7E-10 T 11-10-2018 AMS64_08055 01a8340d9746ca6b8c4d37fd48e59514 345 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 6 129 8.6E-31 T 11-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain AMS64_05310 01056acb0c8620c06377e37f7a91f97c 215 Pfam PF00072 Response regulator receiver domain 4 111 1.1E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_05310 01056acb0c8620c06377e37f7a91f97c 215 SMART SM00448 2 110 8.3E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_05310 01056acb0c8620c06377e37f7a91f97c 215 Gene3D G3DSA:3.40.50.2300 1 119 4.6E-31 T 11-10-2018 AMS64_05310 01056acb0c8620c06377e37f7a91f97c 215 SUPERFAMILY SSF52172 1 170 7.26E-33 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_05310 01056acb0c8620c06377e37f7a91f97c 215 Gene3D G3DSA:1.10.10.10 120 215 4.8E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_05310 01056acb0c8620c06377e37f7a91f97c 215 SMART SM00862 140 211 1.9E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_05310 01056acb0c8620c06377e37f7a91f97c 215 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 211 8.5E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_21815 06660e75b2d491357f09601b6c304bc5 451 Pfam PF02386 Cation transport protein 44 431 8.6E-56 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AMS64_21815 06660e75b2d491357f09601b6c304bc5 451 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 45 423 1.3E-113 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AMS64_09430 734bf32ee3b7bc980a0d1abbfa6591ef 366 SMART SM00382 32 215 6.7E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_09430 734bf32ee3b7bc980a0d1abbfa6591ef 366 SUPERFAMILY SSF50331 240 361 2.78E-9 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMS64_09430 734bf32ee3b7bc980a0d1abbfa6591ef 366 Pfam PF08402 TOBE domain 282 361 4.1E-11 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AMS64_09430 734bf32ee3b7bc980a0d1abbfa6591ef 366 Gene3D G3DSA:2.40.50.940 226 288 3.3E-9 T 11-10-2018 AMS64_09430 734bf32ee3b7bc980a0d1abbfa6591ef 366 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_09430 734bf32ee3b7bc980a0d1abbfa6591ef 366 Gene3D G3DSA:2.40.50.140 289 321 3.3E-9 T 11-10-2018 AMS64_09430 734bf32ee3b7bc980a0d1abbfa6591ef 366 Gene3D G3DSA:3.40.50.300 7 225 7.5E-71 T 11-10-2018 AMS64_09430 734bf32ee3b7bc980a0d1abbfa6591ef 366 SUPERFAMILY SSF52540 8 246 4.23E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09430 734bf32ee3b7bc980a0d1abbfa6591ef 366 Pfam PF00005 ABC transporter 23 164 5.1E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_09430 734bf32ee3b7bc980a0d1abbfa6591ef 366 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 38 361 4.9E-144 T 11-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AMS64_12535 77fd1d8b2b87b4ffef26be2adaf049a5 155 Pfam PF03061 Thioesterase superfamily 20 94 2.8E-20 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMS64_12535 77fd1d8b2b87b4ffef26be2adaf049a5 155 SUPERFAMILY SSF54637 2 151 1.73E-42 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_12535 77fd1d8b2b87b4ffef26be2adaf049a5 155 Gene3D G3DSA:3.10.129.10 1 152 5.8E-45 T 11-10-2018 AMS64_20690 43a5941d5098d328319ac1fde12bffc0 202 SUPERFAMILY SSF55811 18 198 8.8E-38 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_20690 43a5941d5098d328319ac1fde12bffc0 202 Pfam PF00293 NUDIX domain 63 146 3.8E-12 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_20690 43a5941d5098d328319ac1fde12bffc0 202 Gene3D G3DSA:3.90.79.10 24 202 3.7E-45 T 11-10-2018 AMS64_07520 4d166da04eca1bc3bc682eea1630af6e 656 Gene3D G3DSA:3.40.390.10 174 396 9.9E-18 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMS64_07520 4d166da04eca1bc3bc682eea1630af6e 656 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 182 374 4.4E-31 T 11-10-2018 AMS64_07520 4d166da04eca1bc3bc682eea1630af6e 656 SUPERFAMILY SSF55486 187 391 3.29E-25 T 11-10-2018 AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 Gene3D G3DSA:1.10.10.10 190 274 6.2E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 SUPERFAMILY SSF53155 109 187 2.94E-14 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 191 266 4.0E-29 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 Pfam PF12833 Helix-turn-helix domain 27 105 2.9E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 193 270 9.7E-28 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 SUPERFAMILY SSF46689 59 106 5.82E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 SMART SM00342 21 103 4.1E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 Gene3D G3DSA:3.30.160.70 102 189 4.6E-12 T 11-10-2018 AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 Gene3D G3DSA:1.10.10.60 2 57 1.8E-15 T 11-10-2018 AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 SUPERFAMILY SSF46689 4 55 1.08E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 241 247 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 Gene3D G3DSA:1.10.10.60 58 101 8.1E-6 T 11-10-2018 AMS64_10940 f8d2049ad9197d2274119dd4f55abad6 275 SUPERFAMILY SSF46767 190 271 5.1E-28 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 Pfam PF00072 Response regulator receiver domain 14 122 1.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 SUPERFAMILY SSF52172 11 195 1.71E-40 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 Gene3D G3DSA:1.10.10.60 398 447 3.6E-12 T 11-10-2018 AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 SUPERFAMILY SSF52540 150 379 8.91E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 174 187 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 Gene3D G3DSA:3.40.50.2300 10 143 1.2E-31 T 11-10-2018 AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 362 371 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 Gene3D G3DSA:1.10.8.60 320 384 1.0E-18 T 11-10-2018 AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 Pfam PF02954 Bacterial regulatory protein, Fis family 408 448 1.0E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 Pfam PF00158 Sigma-54 interaction domain 150 315 1.9E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 Gene3D G3DSA:3.40.50.300 144 319 9.4E-60 T 11-10-2018 AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 SUPERFAMILY SSF46689 361 450 6.45E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 SMART SM00382 170 312 2.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_07130 f4e51dc4f0d72f6c94c41e0531624a31 451 SMART SM00448 11 122 2.6E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_01585 77d3417ddde34feb16fc2f9ac489ac06 352 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 181 344 1.5E-65 T 11-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMS64_01585 77d3417ddde34feb16fc2f9ac489ac06 352 SUPERFAMILY SSF54197 2 175 2.84E-69 T 11-10-2018 IPR036265 HIT-like superfamily AMS64_01585 77d3417ddde34feb16fc2f9ac489ac06 352 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 149 166 - T 11-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMS64_01585 77d3417ddde34feb16fc2f9ac489ac06 352 Gene3D G3DSA:3.30.428.10 174 352 2.6E-69 T 11-10-2018 IPR036265 HIT-like superfamily AMS64_01585 77d3417ddde34feb16fc2f9ac489ac06 352 PIRSF PIRSF000808 1 339 1.6E-119 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMS64_01585 77d3417ddde34feb16fc2f9ac489ac06 352 SUPERFAMILY SSF54197 177 343 1.18E-52 T 11-10-2018 IPR036265 HIT-like superfamily AMS64_01585 77d3417ddde34feb16fc2f9ac489ac06 352 Gene3D G3DSA:3.30.428.10 43 173 1.0E-52 T 11-10-2018 IPR036265 HIT-like superfamily AMS64_01585 77d3417ddde34feb16fc2f9ac489ac06 352 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 2 345 5.7E-180 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMS64_01585 77d3417ddde34feb16fc2f9ac489ac06 352 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 174 1.2E-66 T 11-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMS64_06390 95fc5246182c4804574f43231136f7ad 347 PIRSF PIRSF000235 1 347 2.6E-193 T 11-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AMS64_06390 95fc5246182c4804574f43231136f7ad 347 SUPERFAMILY SSF51412 6 336 4.32E-99 T 11-10-2018 AMS64_06390 95fc5246182c4804574f43231136f7ad 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.714 T 11-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AMS64_06390 95fc5246182c4804574f43231136f7ad 347 Gene3D G3DSA:3.20.20.70 1 345 2.4E-117 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_06390 95fc5246182c4804574f43231136f7ad 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 337 4.8E-78 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AMS64_06390 95fc5246182c4804574f43231136f7ad 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 8.6E-190 T 11-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AMS64_06390 95fc5246182c4804574f43231136f7ad 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AMS64_06390 95fc5246182c4804574f43231136f7ad 347 SMART SM01240 7 344 1.3E-135 T 11-10-2018 AMS64_22605 12f00d7527739472be5956bb6759647e 202 Gene3D G3DSA:3.40.30.10 19 200 3.7E-50 T 11-10-2018 AMS64_22605 12f00d7527739472be5956bb6759647e 202 PIRSF PIRSF001488 1 201 8.2E-61 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AMS64_22605 12f00d7527739472be5956bb6759647e 202 SUPERFAMILY SSF52833 21 199 6.46E-43 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_22605 12f00d7527739472be5956bb6759647e 202 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMS64_22605 12f00d7527739472be5956bb6759647e 202 Pfam PF01323 DSBA-like thioredoxin domain 42 179 3.1E-22 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AMS64_13100 4bb90e4933a66b701e9fc1c6ced6e261 154 Gene3D G3DSA:3.30.420.10 1 153 5.7E-58 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_13100 4bb90e4933a66b701e9fc1c6ced6e261 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 35.695 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 AMS64_13100 4bb90e4933a66b701e9fc1c6ced6e261 154 SUPERFAMILY SSF53098 4 141 3.92E-57 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_13100 4bb90e4933a66b701e9fc1c6ced6e261 154 Pfam PF00075 RNase H 4 141 1.4E-50 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 9 254 9.9E-91 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 Gene3D G3DSA:3.40.50.720 3 254 3.5E-71 T 11-10-2018 AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 1.4E-51 T 11-10-2018 AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.4E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 6.4E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 6.4E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 6.4E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 6.4E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.4E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 2.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 2.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_15940 ecde6737406b65ad2f101d7d9d5116d1 255 SUPERFAMILY SSF51735 5 253 3.78E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_20990 3a36368c0f169baf81b61844f3289e08 452 Pfam PF00860 Permease family 30 412 1.0E-72 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AMS64_03340 a2136e8812807bf402ebb71f1889bd0a 191 Gene3D G3DSA:3.40.80.10 12 191 2.1E-59 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMS64_03340 a2136e8812807bf402ebb71f1889bd0a 191 SMART SM00644 26 177 1.3E-51 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMS64_03340 a2136e8812807bf402ebb71f1889bd0a 191 SUPERFAMILY SSF55846 14 189 1.7E-67 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMS64_03340 a2136e8812807bf402ebb71f1889bd0a 191 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 62 177 2.0E-26 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMS64_07960 e6db935bf62069290c579061da7e5f82 319 SUPERFAMILY SSF161098 67 294 1.31E-18 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_07960 e6db935bf62069290c579061da7e5f82 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 311 1.3E-40 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_18745 e471866e278156a93bd30793af3208e4 352 Gene3D G3DSA:3.40.50.180 160 352 1.9E-72 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AMS64_18745 e471866e278156a93bd30793af3208e4 352 Pfam PF00072 Response regulator receiver domain 6 109 1.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_18745 e471866e278156a93bd30793af3208e4 352 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 352 39.1 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMS64_18745 e471866e278156a93bd30793af3208e4 352 SMART SM00448 4 120 2.6E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_18745 e471866e278156a93bd30793af3208e4 352 Gene3D G3DSA:3.40.50.2300 2 138 1.1E-31 T 11-10-2018 AMS64_18745 e471866e278156a93bd30793af3208e4 352 SUPERFAMILY SSF52172 1 109 1.11E-28 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_18745 e471866e278156a93bd30793af3208e4 352 PIRSF PIRSF000876 1 352 3.5E-132 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMS64_18745 e471866e278156a93bd30793af3208e4 352 Pfam PF01339 CheB methylesterase 171 347 6.8E-60 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMS64_18745 e471866e278156a93bd30793af3208e4 352 SUPERFAMILY SSF52738 166 350 5.1E-70 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AMS64_10790 cfbb7df9c95aaa0f80ba5f058bff3e7f 550 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 63 467 1.8E-60 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMS64_10790 cfbb7df9c95aaa0f80ba5f058bff3e7f 550 Gene3D G3DSA:1.20.1730.10 50 546 1.8E-57 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AMS64_10790 cfbb7df9c95aaa0f80ba5f058bff3e7f 550 Pfam PF00474 Sodium:solute symporter family 63 469 8.6E-124 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMS64_10790 cfbb7df9c95aaa0f80ba5f058bff3e7f 550 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AMS64_10790 cfbb7df9c95aaa0f80ba5f058bff3e7f 550 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 451 471 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AMS64_03985 2a774eae8365a458dd5e1ca92cc79da7 439 SUPERFAMILY SSF56954 1 418 1.26E-88 T 11-10-2018 AMS64_03985 2a774eae8365a458dd5e1ca92cc79da7 439 Gene3D G3DSA:1.20.1600.10 21 437 3.5E-118 T 11-10-2018 AMS64_03985 2a774eae8365a458dd5e1ca92cc79da7 439 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 19 428 3.9E-113 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AMS64_03985 2a774eae8365a458dd5e1ca92cc79da7 439 Pfam PF02321 Outer membrane efflux protein 24 205 2.3E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMS64_03985 2a774eae8365a458dd5e1ca92cc79da7 439 Pfam PF02321 Outer membrane efflux protein 229 416 9.3E-34 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 8.6E-20 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 46.842 T 11-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 SUPERFAMILY SSF54680 337 438 9.29E-31 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 6.6E-45 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 Gene3D G3DSA:3.90.1170.30 337 433 4.6E-30 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 3.2E-22 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 Gene3D G3DSA:1.20.970.10 7 195 1.1E-125 T 11-10-2018 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 2.8E-160 T 11-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 11-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 Gene3D G3DSA:3.40.1030.10 70 322 1.1E-125 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 SUPERFAMILY SSF47648 2 70 1.7E-22 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 SUPERFAMILY SSF52418 72 333 3.66E-88 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 1.0E-220 T 11-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 SMART SM00941 350 424 1.3E-28 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20095 f7ca717392f86f9050e8a05df2da0ef6 443 PIRSF PIRSF000478 1 439 3.2E-150 T 11-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 SUPERFAMILY SSF58104 227 536 2.62E-71 T 11-10-2018 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 Gene3D G3DSA:3.30.450.20 37 181 1.4E-31 T 11-10-2018 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 Gene3D G3DSA:1.10.287.950 206 537 1.6E-71 T 11-10-2018 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 Pfam PF00672 HAMP domain 207 245 9.8E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 Pfam PF17200 Single Cache domain 2 39 181 1.6E-27 T 11-10-2018 IPR033480 Single Cache domain 2 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 SMART SM00283 274 535 4.6E-70 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 346 501 3.2E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 SMART SM01049 36 126 3.3E-22 T 11-10-2018 IPR033480 Single Cache domain 2 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 3.9E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 3.9E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 11 36 3.9E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 SMART SM00304 260 312 55.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_20625 77e14aeee801e743095e294314bc34d3 560 SMART SM00304 207 259 3.4E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_19455 4c674746cb7f3c51cfc5b795c6bc3911 246 Gene3D G3DSA:3.30.420.40 1 104 1.2E-24 T 11-10-2018 AMS64_19455 4c674746cb7f3c51cfc5b795c6bc3911 246 Pfam PF00480 ROK family 4 165 5.3E-22 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMS64_19455 4c674746cb7f3c51cfc5b795c6bc3911 246 Gene3D G3DSA:3.30.420.40 105 245 1.9E-37 T 11-10-2018 AMS64_19455 4c674746cb7f3c51cfc5b795c6bc3911 246 SUPERFAMILY SSF53067 1 244 1.95E-37 T 11-10-2018 AMS64_04285 deb2438b7ef0bb336543aae40300752e 151 Pfam PF13673 Acetyltransferase (GNAT) domain 52 148 3.0E-12 T 11-10-2018 IPR000182 GNAT domain AMS64_04285 deb2438b7ef0bb336543aae40300752e 151 Gene3D G3DSA:3.40.630.30 1 149 1.3E-40 T 11-10-2018 AMS64_04285 deb2438b7ef0bb336543aae40300752e 151 SUPERFAMILY SSF55729 1 149 7.09E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_15120 1efdd3d084da6e12feb36f0f614c3006 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 218.576 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 AMS64_15120 1efdd3d084da6e12feb36f0f614c3006 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 176 369 2.0E-70 T 11-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 AMS64_15120 1efdd3d084da6e12feb36f0f614c3006 482 SUPERFAMILY SSF143437 1 173 3.66E-48 T 11-10-2018 AMS64_15120 1efdd3d084da6e12feb36f0f614c3006 482 Gene3D G3DSA:3.30.2130.30 1 174 1.0E-34 T 11-10-2018 AMS64_15120 1efdd3d084da6e12feb36f0f614c3006 482 SUPERFAMILY SSF52402 176 372 1.65E-40 T 11-10-2018 AMS64_15120 1efdd3d084da6e12feb36f0f614c3006 482 Pfam PF02926 THUMP domain 28 161 7.9E-24 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AMS64_15120 1efdd3d084da6e12feb36f0f614c3006 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 2.6E-114 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 AMS64_15120 1efdd3d084da6e12feb36f0f614c3006 482 SUPERFAMILY SSF52821 395 481 1.17E-12 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_15120 1efdd3d084da6e12feb36f0f614c3006 482 SMART SM00981 75 165 2.5E-26 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AMS64_15120 1efdd3d084da6e12feb36f0f614c3006 482 Gene3D G3DSA:3.40.250.10 392 482 4.1E-11 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_15120 1efdd3d084da6e12feb36f0f614c3006 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 4.6E-40 T 11-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 AMS64_15120 1efdd3d084da6e12feb36f0f614c3006 482 Gene3D G3DSA:3.40.50.620 175 383 1.3E-48 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_12950 7f8a9b5a91c0fa00233c735eccea6361 607 Pfam PF00916 Sulfate permease family 26 391 1.9E-85 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMS64_12950 7f8a9b5a91c0fa00233c735eccea6361 607 Gene3D G3DSA:3.30.750.24 437 561 2.5E-19 T 11-10-2018 IPR036513 STAS domain superfamily AMS64_12950 7f8a9b5a91c0fa00233c735eccea6361 607 Pfam PF01740 STAS domain 444 537 2.5E-14 T 11-10-2018 IPR002645 STAS domain AMS64_12950 7f8a9b5a91c0fa00233c735eccea6361 607 SUPERFAMILY SSF52091 447 537 9.22E-10 T 11-10-2018 IPR036513 STAS domain superfamily AMS64_10865 c7ce1da6ef21b53ca6ba9fbddb04a6a3 196 SMART SM00471 26 151 5.8E-8 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_10865 c7ce1da6ef21b53ca6ba9fbddb04a6a3 196 Gene3D G3DSA:1.10.3210.10 1 196 7.2E-79 T 11-10-2018 AMS64_10865 c7ce1da6ef21b53ca6ba9fbddb04a6a3 196 SUPERFAMILY SSF109604 3 193 6.28E-46 T 11-10-2018 AMS64_10865 c7ce1da6ef21b53ca6ba9fbddb04a6a3 196 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 183 9.0E-32 T 11-10-2018 AMS64_10865 c7ce1da6ef21b53ca6ba9fbddb04a6a3 196 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 41.865 T 11-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 AMS64_10865 c7ce1da6ef21b53ca6ba9fbddb04a6a3 196 Pfam PF13023 HD domain 11 160 6.2E-17 T 11-10-2018 IPR006674 HD domain AMS64_01080 2cbd8dfe7c779bbf83ec01f4ef1cca6c 135 Gene3D G3DSA:1.10.287.1050 1 83 9.1E-30 T 11-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 AMS64_01080 2cbd8dfe7c779bbf83ec01f4ef1cca6c 135 Gene3D G3DSA:4.10.430.10 93 135 6.1E-20 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 AMS64_01080 2cbd8dfe7c779bbf83ec01f4ef1cca6c 135 SUPERFAMILY SSF81273 2 58 2.55E-15 T 11-10-2018 AMS64_01080 2cbd8dfe7c779bbf83ec01f4ef1cca6c 135 SUPERFAMILY SSF81273 94 135 9.02E-10 T 11-10-2018 AMS64_01080 2cbd8dfe7c779bbf83ec01f4ef1cca6c 135 Pfam PF00816 H-NS histone family 32 128 2.3E-18 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AMS64_01080 2cbd8dfe7c779bbf83ec01f4ef1cca6c 135 SMART SM00528 89 135 2.4E-19 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AMS64_01080 2cbd8dfe7c779bbf83ec01f4ef1cca6c 135 PIRSF PIRSF002096 1 135 1.1E-52 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AMS64_10770 219af70d9ad6b89495ef6c2b763cc3a7 268 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 240 6.8E-40 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMS64_10770 219af70d9ad6b89495ef6c2b763cc3a7 268 Gene3D G3DSA:1.10.12.10 207 253 1.3E-9 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMS64_10770 219af70d9ad6b89495ef6c2b763cc3a7 268 Gene3D G3DSA:3.90.226.10 2 206 5.1E-63 T 11-10-2018 AMS64_10770 219af70d9ad6b89495ef6c2b763cc3a7 268 SUPERFAMILY SSF52096 4 248 5.41E-64 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_06400 70ec3b3668509e0f18e0835847ae375c 163 Pfam PF05932 Tir chaperone protein (CesT) family 22 132 1.8E-11 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AMS64_06400 70ec3b3668509e0f18e0835847ae375c 163 Gene3D G3DSA:3.30.1460.10 9 142 1.1E-13 T 11-10-2018 AMS64_06400 70ec3b3668509e0f18e0835847ae375c 163 SUPERFAMILY SSF69635 13 147 2.77E-12 T 11-10-2018 AMS64_09850 55c03d8297d094834f1e45681f36048a 327 Gene3D G3DSA:3.30.2350.10 105 326 1.3E-84 T 11-10-2018 AMS64_09850 55c03d8297d094834f1e45681f36048a 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 152 166 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_09850 55c03d8297d094834f1e45681f36048a 327 Pfam PF01479 S4 domain 33 79 2.5E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_09850 55c03d8297d094834f1e45681f36048a 327 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 29 323 2.3E-93 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_09850 55c03d8297d094834f1e45681f36048a 327 Pfam PF00849 RNA pseudouridylate synthase 114 260 6.1E-33 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_09850 55c03d8297d094834f1e45681f36048a 327 SUPERFAMILY SSF55174 32 83 5.0E-9 T 11-10-2018 AMS64_09850 55c03d8297d094834f1e45681f36048a 327 Gene3D G3DSA:3.10.290.10 18 85 2.6E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMS64_09850 55c03d8297d094834f1e45681f36048a 327 SMART SM00363 33 92 1.6E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_09850 55c03d8297d094834f1e45681f36048a 327 SUPERFAMILY SSF55120 106 323 9.6E-66 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_11275 874afb753619c7c82e7b76c158e32a72 512 Gene3D G3DSA:1.10.8.60 369 435 5.1E-18 T 11-10-2018 AMS64_11275 874afb753619c7c82e7b76c158e32a72 512 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 284 299 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMS64_11275 874afb753619c7c82e7b76c158e32a72 512 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 222 235 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMS64_11275 874afb753619c7c82e7b76c158e32a72 512 SUPERFAMILY SSF46689 412 511 4.48E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_11275 874afb753619c7c82e7b76c158e32a72 512 Gene3D G3DSA:3.40.50.300 184 368 2.1E-61 T 11-10-2018 AMS64_11275 874afb753619c7c82e7b76c158e32a72 512 Pfam PF00158 Sigma-54 interaction domain 198 361 8.6E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_11275 874afb753619c7c82e7b76c158e32a72 512 SUPERFAMILY SSF52540 198 441 1.0E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11275 874afb753619c7c82e7b76c158e32a72 512 SMART SM00382 218 361 1.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_11275 874afb753619c7c82e7b76c158e32a72 512 Gene3D G3DSA:1.10.10.60 456 512 4.5E-6 T 11-10-2018 AMS64_11275 874afb753619c7c82e7b76c158e32a72 512 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 411 420 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.0E-171 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 SUPERFAMILY SSF81271 279 359 5.01E-36 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.3E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.3E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.3E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.3E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.525 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 Gene3D G3DSA:3.40.50.300 4 278 6.7E-151 T 11-10-2018 AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.4E-39 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 SUPERFAMILY SSF52540 3 301 3.17E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 PIRSF PIRSF006641 1 363 2.9E-156 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 Gene3D G3DSA:3.10.20.30 48 362 6.7E-151 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 Gene3D G3DSA:1.10.150.300 120 200 6.7E-151 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 AMS64_06780 fe9d6961e3d1320f87ada0940651b04e 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 3.3E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_09400 0011122d03d0255e8f115e91abac231e 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 31.081 T 11-10-2018 IPR023064 D-ribose pyranase GO:0016872 AMS64_09400 0011122d03d0255e8f115e91abac231e 139 Pfam PF05025 RbsD / FucU transport protein family 1 137 3.5E-43 T 11-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AMS64_09400 0011122d03d0255e8f115e91abac231e 139 Gene3D G3DSA:3.40.1650.10 8 136 2.5E-37 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AMS64_09400 0011122d03d0255e8f115e91abac231e 139 SUPERFAMILY SSF102546 1 139 3.14E-40 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AMS64_15400 d28edc8c2fa7e305e0cff51f7b024b4c 439 SMART SM01091 348 428 2.1E-30 T 11-10-2018 IPR005170 Transporter-associated domain AMS64_15400 d28edc8c2fa7e305e0cff51f7b024b4c 439 Pfam PF00571 CBS domain 287 334 1.6E-4 T 11-10-2018 IPR000644 CBS domain AMS64_15400 d28edc8c2fa7e305e0cff51f7b024b4c 439 Gene3D G3DSA:3.30.465.10 349 428 7.2E-31 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMS64_15400 d28edc8c2fa7e305e0cff51f7b024b4c 439 SUPERFAMILY SSF54631 202 337 5.78E-20 T 11-10-2018 AMS64_15400 d28edc8c2fa7e305e0cff51f7b024b4c 439 Pfam PF03471 Transporter associated domain 349 427 5.3E-23 T 11-10-2018 IPR005170 Transporter-associated domain AMS64_15400 d28edc8c2fa7e305e0cff51f7b024b4c 439 Pfam PF01595 Domain of unknown function DUF21 9 199 1.1E-39 T 11-10-2018 IPR002550 CNNM, transmembrane domain AMS64_15400 d28edc8c2fa7e305e0cff51f7b024b4c 439 Gene3D G3DSA:3.10.580.10 195 348 5.3E-30 T 11-10-2018 AMS64_15400 d28edc8c2fa7e305e0cff51f7b024b4c 439 SUPERFAMILY SSF56176 346 433 1.28E-24 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMS64_18025 11a8bc8dc9e1edeb42e9f38aa61605dc 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.002 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AMS64_18025 11a8bc8dc9e1edeb42e9f38aa61605dc 185 Pfam PF01765 Ribosome recycling factor 20 183 1.2E-64 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AMS64_18025 11a8bc8dc9e1edeb42e9f38aa61605dc 185 Gene3D G3DSA:1.10.132.20 102 185 1.5E-25 T 11-10-2018 AMS64_18025 11a8bc8dc9e1edeb42e9f38aa61605dc 185 Gene3D G3DSA:3.30.1360.40 36 101 3.3E-31 T 11-10-2018 AMS64_18025 11a8bc8dc9e1edeb42e9f38aa61605dc 185 SUPERFAMILY SSF55194 2 184 1.83E-71 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 AMS64_18025 11a8bc8dc9e1edeb42e9f38aa61605dc 185 Gene3D G3DSA:1.10.132.20 1 35 3.8E-7 T 11-10-2018 AMS64_18025 11a8bc8dc9e1edeb42e9f38aa61605dc 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.1E-76 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AMS64_13295 a5a2e6ac36fcf2c26def9d2ac7f46d2d 127 SUPERFAMILY SSF55298 1 125 1.52E-42 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_13295 a5a2e6ac36fcf2c26def9d2ac7f46d2d 127 Pfam PF01042 Endoribonuclease L-PSP 9 124 3.2E-39 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMS64_13295 a5a2e6ac36fcf2c26def9d2ac7f46d2d 127 Gene3D G3DSA:3.30.1330.40 1 126 8.6E-50 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_13295 a5a2e6ac36fcf2c26def9d2ac7f46d2d 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 123 3.0E-46 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 AMS64_04830 0765a2734187d65c255b7a426dc40926 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 6.9E-109 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMS64_04830 0765a2734187d65c255b7a426dc40926 264 PIRSF PIRSF000388 1 264 2.3E-99 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMS64_04830 0765a2734187d65c255b7a426dc40926 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 263 3.8E-110 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMS64_04830 0765a2734187d65c255b7a426dc40926 264 SUPERFAMILY SSF51621 3 263 2.16E-105 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMS64_04830 0765a2734187d65c255b7a426dc40926 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.999 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMS64_04830 0765a2734187d65c255b7a426dc40926 264 Gene3D G3DSA:3.20.20.60 1 264 5.9E-108 T 11-10-2018 AMS64_14585 48152c0578b57b4a361a91cf95b0a9c7 233 Pfam PF00665 Integrase core domain 76 189 1.0E-22 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_14585 48152c0578b57b4a361a91cf95b0a9c7 233 Gene3D G3DSA:3.30.420.10 71 229 7.2E-14 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_14585 48152c0578b57b4a361a91cf95b0a9c7 233 SUPERFAMILY SSF53098 76 227 2.88E-35 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_10455 f16cd0c7d89dae78c963565b3784a89e 362 Gene3D G3DSA:3.40.50.2000 54 360 4.0E-57 T 11-10-2018 AMS64_10455 f16cd0c7d89dae78c963565b3784a89e 362 Pfam PF00534 Glycosyl transferases group 1 186 327 3.1E-30 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMS64_10455 f16cd0c7d89dae78c963565b3784a89e 362 Pfam PF13439 Glycosyltransferase Family 4 17 176 4.3E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMS64_10455 f16cd0c7d89dae78c963565b3784a89e 362 Gene3D G3DSA:3.40.50.2000 172 347 4.0E-57 T 11-10-2018 AMS64_10455 f16cd0c7d89dae78c963565b3784a89e 362 SUPERFAMILY SSF53756 9 361 2.04E-67 T 11-10-2018 AMS64_19380 0e0a8c6aa87db3136e1dba0493d240f3 85 SUPERFAMILY SSF110324 2 82 6.98E-33 T 11-10-2018 AMS64_19380 0e0a8c6aa87db3136e1dba0493d240f3 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.4E-40 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19380 0e0a8c6aa87db3136e1dba0493d240f3 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-15 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19380 0e0a8c6aa87db3136e1dba0493d240f3 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_19380 0e0a8c6aa87db3136e1dba0493d240f3 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 7.5E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19380 0e0a8c6aa87db3136e1dba0493d240f3 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 7.5E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19380 0e0a8c6aa87db3136e1dba0493d240f3 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 7.5E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19380 0e0a8c6aa87db3136e1dba0493d240f3 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.491 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19380 0e0a8c6aa87db3136e1dba0493d240f3 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.5E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19380 0e0a8c6aa87db3136e1dba0493d240f3 85 Gene3D G3DSA:2.40.50.100 21 85 9.9E-28 T 11-10-2018 AMS64_03940 3c1921480445ba017394debac45f2816 170 Pfam PF00924 Mechanosensitive ion channel 46 157 1.7E-13 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMS64_03940 3c1921480445ba017394debac45f2816 170 SUPERFAMILY SSF50182 91 157 4.58E-12 T 11-10-2018 IPR010920 LSM domain superfamily AMS64_03370 6dc86ec0d9929629ce4ff77ac5aa0ee4 636 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 420 603 1.1E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_03370 6dc86ec0d9929629ce4ff77ac5aa0ee4 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 501 530 2.7E-7 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_03370 6dc86ec0d9929629ce4ff77ac5aa0ee4 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 388 417 2.7E-7 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_03370 6dc86ec0d9929629ce4ff77ac5aa0ee4 636 Pfam PF02743 Cache domain 43 267 1.6E-13 T 11-10-2018 IPR033479 Double Cache domain 1 AMS64_03370 6dc86ec0d9929629ce4ff77ac5aa0ee4 636 SMART SM00304 305 359 4.8E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_03370 6dc86ec0d9929629ce4ff77ac5aa0ee4 636 Gene3D G3DSA:1.10.287.950 305 636 2.6E-75 T 11-10-2018 AMS64_03370 6dc86ec0d9929629ce4ff77ac5aa0ee4 636 SUPERFAMILY SSF58104 327 636 3.27E-76 T 11-10-2018 AMS64_03370 6dc86ec0d9929629ce4ff77ac5aa0ee4 636 Gene3D G3DSA:3.30.450.20 157 284 6.2E-16 T 11-10-2018 AMS64_03370 6dc86ec0d9929629ce4ff77ac5aa0ee4 636 SMART SM00283 374 635 1.6E-86 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_03370 6dc86ec0d9929629ce4ff77ac5aa0ee4 636 Pfam PF00672 HAMP domain 306 355 7.9E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_00260 38fc38892be77fd5a28f7f84f8f7e59c 91 SUPERFAMILY SSF63562 1 78 3.53E-24 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMS64_00260 38fc38892be77fd5a28f7f84f8f7e59c 91 Pfam PF01192 RNA polymerase Rpb6 10 59 1.9E-16 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMS64_00260 38fc38892be77fd5a28f7f84f8f7e59c 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.65 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_00260 38fc38892be77fd5a28f7f84f8f7e59c 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.4E-27 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_00260 38fc38892be77fd5a28f7f84f8f7e59c 91 Gene3D G3DSA:3.90.940.10 1 91 1.2E-28 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMS64_00260 38fc38892be77fd5a28f7f84f8f7e59c 91 SMART SM01409 8 61 1.4E-14 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMS64_17090 c4ad4b02a404565e401160cf0718fd5a 448 Gene3D G3DSA:1.20.1740.10 8 439 4.0E-62 T 11-10-2018 AMS64_17090 c4ad4b02a404565e401160cf0718fd5a 448 Pfam PF13520 Amino acid permease 47 406 1.2E-33 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_17090 c4ad4b02a404565e401160cf0718fd5a 448 PIRSF PIRSF006060 1 448 2.1E-67 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_16395 0591ea4924fa872e4630e0e4973b9443 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 1.5E-7 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMS64_16395 0591ea4924fa872e4630e0e4973b9443 338 Gene3D G3DSA:3.30.930.10 2 249 5.6E-87 T 11-10-2018 AMS64_16395 0591ea4924fa872e4630e0e4973b9443 338 SUPERFAMILY SSF82649 249 336 5.23E-24 T 11-10-2018 AMS64_16395 0591ea4924fa872e4630e0e4973b9443 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 333 3.4E-18 T 11-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 AMS64_16395 0591ea4924fa872e4630e0e4973b9443 338 Gene3D G3DSA:3.30.390.50 250 338 1.1E-28 T 11-10-2018 AMS64_16395 0591ea4924fa872e4630e0e4973b9443 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 326 1.2E-116 T 11-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 AMS64_16395 0591ea4924fa872e4630e0e4973b9443 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 56.523 T 11-10-2018 IPR023741 Lipoate-protein ligase A GO:0009249|GO:0016979 KEGG: 00785+6.3.1.20 AMS64_16395 0591ea4924fa872e4630e0e4973b9443 338 SUPERFAMILY SSF55681 4 247 6.96E-80 T 11-10-2018 AMS64_18700 4da83faa45c5ec53d0bcb90f808208e8 404 SUPERFAMILY SSF58104 108 350 1.24E-34 T 11-10-2018 AMS64_18700 4da83faa45c5ec53d0bcb90f808208e8 404 SMART SM00283 102 326 2.1E-4 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_18700 4da83faa45c5ec53d0bcb90f808208e8 404 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 36 56 6.2E-18 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_18700 4da83faa45c5ec53d0bcb90f808208e8 404 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 227 256 6.2E-18 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_18700 4da83faa45c5ec53d0bcb90f808208e8 404 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 198 225 6.2E-18 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_18700 4da83faa45c5ec53d0bcb90f808208e8 404 Gene3D G3DSA:1.10.287.950 66 368 4.2E-36 T 11-10-2018 AMS64_18700 4da83faa45c5ec53d0bcb90f808208e8 404 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 177 320 2.4E-23 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 Pfam PF03949 Malic enzyme, NAD binding domain 278 537 2.6E-93 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 SUPERFAMILY SSF53223 9 277 4.17E-101 T 11-10-2018 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 PRINTS PR00072 Malic enzyme signature 154 183 4.1E-70 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 PRINTS PR00072 Malic enzyme signature 249 267 4.1E-70 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 PRINTS PR00072 Malic enzyme signature 190 212 4.1E-70 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 PRINTS PR00072 Malic enzyme signature 274 290 4.1E-70 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 PRINTS PR00072 Malic enzyme signature 305 321 4.1E-70 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 PRINTS PR00072 Malic enzyme signature 416 432 4.1E-70 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 PRINTS PR00072 Malic enzyme signature 94 118 4.1E-70 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 Gene3D G3DSA:3.40.50.10380 22 275 4.1E-104 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 PIRSF PIRSF000106 1 571 4.4E-217 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 SMART SM01274 88 268 3.0E-96 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 ProSitePatterns PS00331 Malic enzymes signature. 274 290 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 Pfam PF00390 Malic enzyme, N-terminal domain 88 268 7.2E-70 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 Gene3D G3DSA:3.40.50.720 276 570 7.8E-102 T 11-10-2018 AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 SUPERFAMILY SSF51735 278 570 5.25E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_07200 cb836cc281b9a1de9e5956cb107ed2b8 571 SMART SM00919 278 539 2.4E-111 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMS64_03280 b0e5e7c288399a19d88f837536501ffc 301 Gene3D G3DSA:2.70.70.10 135 300 7.6E-44 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_03280 b0e5e7c288399a19d88f837536501ffc 301 SUPERFAMILY SSF51261 138 296 5.75E-53 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_03280 b0e5e7c288399a19d88f837536501ffc 301 Pfam PF01551 Peptidase family M23 198 292 2.6E-30 T 11-10-2018 IPR016047 Peptidase M23 AMS64_08645 a348d0ea27c88e60ab5fe69ac2dd869a 237 Gene3D G3DSA:1.20.120.530 80 237 1.6E-42 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMS64_08645 a348d0ea27c88e60ab5fe69ac2dd869a 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.2E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_08645 a348d0ea27c88e60ab5fe69ac2dd869a 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_08645 a348d0ea27c88e60ab5fe69ac2dd869a 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_08645 a348d0ea27c88e60ab5fe69ac2dd869a 237 Gene3D G3DSA:1.10.10.10 1 79 6.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_08645 a348d0ea27c88e60ab5fe69ac2dd869a 237 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 237 160.643 T 11-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AMS64_08645 a348d0ea27c88e60ab5fe69ac2dd869a 237 SUPERFAMILY SSF48008 79 230 3.01E-59 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMS64_08645 a348d0ea27c88e60ab5fe69ac2dd869a 237 SMART SM00345 12 71 1.0E-22 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_08645 a348d0ea27c88e60ab5fe69ac2dd869a 237 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 5.4E-119 T 11-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AMS64_08645 a348d0ea27c88e60ab5fe69ac2dd869a 237 Pfam PF07840 FadR C-terminal domain 72 234 1.3E-72 T 11-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 AMS64_08645 a348d0ea27c88e60ab5fe69ac2dd869a 237 SUPERFAMILY SSF46785 11 75 2.73E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_04765 627a2580d12f9a54c9eeafd6fdd9e8f9 526 SUPERFAMILY SSF109604 328 518 1.86E-33 T 11-10-2018 AMS64_04765 627a2580d12f9a54c9eeafd6fdd9e8f9 526 Pfam PF00072 Response regulator receiver domain 35 145 2.3E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_04765 627a2580d12f9a54c9eeafd6fdd9e8f9 526 SMART SM00471 337 487 7.4E-8 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_04765 627a2580d12f9a54c9eeafd6fdd9e8f9 526 Pfam PF01966 HD domain 342 477 6.8E-18 T 11-10-2018 IPR006674 HD domain AMS64_04765 627a2580d12f9a54c9eeafd6fdd9e8f9 526 SUPERFAMILY SSF52172 28 166 4.13E-14 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_04765 627a2580d12f9a54c9eeafd6fdd9e8f9 526 Pfam PF11849 Domain of unknown function (DUF3369) 155 319 1.9E-42 T 11-10-2018 IPR021800 Domain of unknown function DUF3369 AMS64_04765 627a2580d12f9a54c9eeafd6fdd9e8f9 526 Gene3D G3DSA:1.10.3210.10 317 522 1.8E-71 T 11-10-2018 AMS64_04765 627a2580d12f9a54c9eeafd6fdd9e8f9 526 SMART SM00448 33 155 0.0058 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_04765 627a2580d12f9a54c9eeafd6fdd9e8f9 526 Gene3D G3DSA:3.40.50.2300 27 161 2.6E-14 T 11-10-2018 AMS64_20055 3443b7c5be9b60ae20293cee106ef89a 126 Gene3D G3DSA:2.40.10.220 1 123 8.5E-37 T 11-10-2018 AMS64_20055 3443b7c5be9b60ae20293cee106ef89a 126 PIRSF PIRSF028141 1 120 9.7E-50 T 11-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type AMS64_20055 3443b7c5be9b60ae20293cee106ef89a 126 Pfam PF07238 PilZ domain 3 100 8.7E-11 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AMS64_20055 3443b7c5be9b60ae20293cee106ef89a 126 SUPERFAMILY SSF141371 1 118 1.96E-33 T 11-10-2018 AMS64_06350 b41c0ff240dad8ec4af3bf07a5752158 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 11 180 1.8E-16 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_06350 b41c0ff240dad8ec4af3bf07a5752158 215 SUPERFAMILY SSF56784 9 199 5.11E-39 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_06350 b41c0ff240dad8ec4af3bf07a5752158 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 180 3.7E-17 T 11-10-2018 AMS64_06350 b41c0ff240dad8ec4af3bf07a5752158 215 Gene3D G3DSA:3.40.50.1000 9 182 8.1E-48 T 11-10-2018 IPR023214 HAD superfamily AMS64_06350 b41c0ff240dad8ec4af3bf07a5752158 215 Gene3D G3DSA:1.10.150.240 23 81 8.1E-48 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMS64_07180 e324be559d12dc9ab392ee3af915ff13 208 Gene3D G3DSA:3.30.70.20 63 120 1.4E-33 T 11-10-2018 AMS64_07180 e324be559d12dc9ab392ee3af915ff13 208 Pfam PF13247 4Fe-4S dicluster domain 54 166 4.2E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_07180 e324be559d12dc9ab392ee3af915ff13 208 SUPERFAMILY SSF54862 1 182 9.73E-48 T 11-10-2018 AMS64_07180 e324be559d12dc9ab392ee3af915ff13 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_07180 e324be559d12dc9ab392ee3af915ff13 208 PRINTS PR00354 7Fe ferredoxin signature 67 77 9.9E-5 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AMS64_07180 e324be559d12dc9ab392ee3af915ff13 208 PRINTS PR00354 7Fe ferredoxin signature 84 101 9.9E-5 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AMS64_07180 e324be559d12dc9ab392ee3af915ff13 208 PRINTS PR00354 7Fe ferredoxin signature 57 67 9.9E-5 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AMS64_07180 e324be559d12dc9ab392ee3af915ff13 208 Gene3D G3DSA:3.30.70.20 5 176 1.4E-33 T 11-10-2018 AMS64_17930 68b595050c8374ba7f70ea3e9ba16e1a 306 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 37 166 1.7E-60 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMS64_17930 68b595050c8374ba7f70ea3e9ba16e1a 306 Gene3D G3DSA:3.40.50.300 1 193 3.4E-42 T 11-10-2018 AMS64_17930 68b595050c8374ba7f70ea3e9ba16e1a 306 Gene3D G3DSA:1.10.8.300 195 297 2.3E-18 T 11-10-2018 AMS64_17930 68b595050c8374ba7f70ea3e9ba16e1a 306 PIRSF PIRSF002849 1 303 1.7E-107 T 11-10-2018 AMS64_17930 68b595050c8374ba7f70ea3e9ba16e1a 306 SUPERFAMILY SSF52540 18 278 2.53E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_12775 15abd930bd135f7e843c8902c82165a0 888 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 630 658 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMS64_12775 15abd930bd135f7e843c8902c82165a0 888 Pfam PF00171 Aldehyde dehydrogenase family 6 401 4.1E-29 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMS64_12775 15abd930bd135f7e843c8902c82165a0 888 Gene3D G3DSA:3.40.605.10 10 444 1.1E-178 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMS64_12775 15abd930bd135f7e843c8902c82165a0 888 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 718 738 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMS64_12775 15abd930bd135f7e843c8902c82165a0 888 PIRSF PIRSF000111 1 864 0.0 T 11-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 AMS64_12775 15abd930bd135f7e843c8902c82165a0 888 Gene3D G3DSA:3.40.50.1970 450 641 2.7E-56 T 11-10-2018 AMS64_12775 15abd930bd135f7e843c8902c82165a0 888 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 848 2.8E-112 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AMS64_12775 15abd930bd135f7e843c8902c82165a0 888 Gene3D G3DSA:3.40.309.10 218 404 1.1E-178 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMS64_12775 15abd930bd135f7e843c8902c82165a0 888 Gene3D G3DSA:1.20.1090.10 643 863 5.1E-62 T 11-10-2018 AMS64_12775 15abd930bd135f7e843c8902c82165a0 888 SUPERFAMILY SSF53720 6 453 9.95E-85 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMS64_12775 15abd930bd135f7e843c8902c82165a0 888 SUPERFAMILY SSF56796 451 862 6.41E-114 T 11-10-2018 AMS64_01880 fa9b8be20cb49e249a7f68a6aae43206 509 Gene3D G3DSA:3.40.1450.10 79 308 1.7E-212 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_01880 fa9b8be20cb49e249a7f68a6aae43206 509 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 295 9.0E-80 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_01880 fa9b8be20cb49e249a7f68a6aae43206 509 SUPERFAMILY SSF53649 5 505 1.11E-77 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMS64_01880 fa9b8be20cb49e249a7f68a6aae43206 509 Gene3D G3DSA:3.40.720.10 7 504 1.7E-212 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMS64_01880 fa9b8be20cb49e249a7f68a6aae43206 509 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 507 49.521 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_01880 fa9b8be20cb49e249a7f68a6aae43206 509 SUPERFAMILY SSF64158 79 306 6.28E-84 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_01880 fa9b8be20cb49e249a7f68a6aae43206 509 PIRSF PIRSF001492 1 509 1.3E-204 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_01880 fa9b8be20cb49e249a7f68a6aae43206 509 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 506 2.3E-227 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMS64_01880 fa9b8be20cb49e249a7f68a6aae43206 509 Pfam PF01676 Metalloenzyme superfamily 6 494 4.2E-78 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AMS64_21240 8c96962367e2c7c19f90f33a1189fe26 1134 SUPERFAMILY SSF52540 475 728 9.31E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_21240 8c96962367e2c7c19f90f33a1189fe26 1134 Gene3D G3DSA:3.40.50.300 536 769 1.3E-56 T 11-10-2018 AMS64_21240 8c96962367e2c7c19f90f33a1189fe26 1134 Pfam PF08463 EcoEI R protein C-terminal 976 1114 1.1E-17 T 11-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 AMS64_21240 8c96962367e2c7c19f90f33a1189fe26 1134 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 168 319 4.8E-7 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AMS64_21240 8c96962367e2c7c19f90f33a1189fe26 1134 Pfam PF13643 Domain of unknown function (DUF4145) 25 111 1.1E-7 T 11-10-2018 IPR025285 Domain of unknown function DUF4145 AMS64_21240 8c96962367e2c7c19f90f33a1189fe26 1134 Pfam PF04851 Type III restriction enzyme, res subunit 367 513 2.8E-31 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMS64_21240 8c96962367e2c7c19f90f33a1189fe26 1134 Pfam PF00271 Helicase conserved C-terminal domain 622 724 1.2E-5 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_21240 8c96962367e2c7c19f90f33a1189fe26 1134 Gene3D G3DSA:3.40.50.300 346 529 2.8E-44 T 11-10-2018 AMS64_21240 8c96962367e2c7c19f90f33a1189fe26 1134 SUPERFAMILY SSF52540 325 560 1.71E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_21240 8c96962367e2c7c19f90f33a1189fe26 1134 Gene3D G3DSA:3.90.1570.30 188 345 4.0E-28 T 11-10-2018 AMS64_21240 8c96962367e2c7c19f90f33a1189fe26 1134 SMART SM00487 362 545 7.3E-15 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_00555 1436a4d11c0f17a97c415951323d3f98 462 Gene3D G3DSA:2.40.10.170 2 77 1.9E-25 T 11-10-2018 AMS64_00555 1436a4d11c0f17a97c415951323d3f98 462 Gene3D G3DSA:3.40.50.300 78 346 2.3E-112 T 11-10-2018 AMS64_00555 1436a4d11c0f17a97c415951323d3f98 462 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 335 344 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_00555 1436a4d11c0f17a97c415951323d3f98 462 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 75 2.6E-15 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_00555 1436a4d11c0f17a97c415951323d3f98 462 SMART SM00382 144 329 0.0037 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_00555 1436a4d11c0f17a97c415951323d3f98 462 SUPERFAMILY SSF47917 347 461 2.38E-54 T 11-10-2018 AMS64_00555 1436a4d11c0f17a97c415951323d3f98 462 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 462 56.341 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AMS64_00555 1436a4d11c0f17a97c415951323d3f98 462 SUPERFAMILY SSF50615 1 76 6.02E-23 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_00555 1436a4d11c0f17a97c415951323d3f98 462 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 344 1.3E-63 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_00555 1436a4d11c0f17a97c415951323d3f98 462 SUPERFAMILY SSF52540 79 350 2.57E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00555 1436a4d11c0f17a97c415951323d3f98 462 Gene3D G3DSA:1.10.1140.10 347 462 2.1E-60 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_00555 1436a4d11c0f17a97c415951323d3f98 462 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 462 5.7E-258 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AMS64_15970 9eb5a6979baa255c9530f823dbeddd0d 332 SUPERFAMILY SSF47413 2 60 6.0E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_15970 9eb5a6979baa255c9530f823dbeddd0d 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_15970 9eb5a6979baa255c9530f823dbeddd0d 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_15970 9eb5a6979baa255c9530f823dbeddd0d 332 Gene3D G3DSA:3.40.50.2300 161 291 6.0E-75 T 11-10-2018 AMS64_15970 9eb5a6979baa255c9530f823dbeddd0d 332 SMART SM00354 1 71 2.4E-30 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_15970 9eb5a6979baa255c9530f823dbeddd0d 332 Gene3D G3DSA:3.40.50.2300 62 309 6.0E-75 T 11-10-2018 AMS64_15970 9eb5a6979baa255c9530f823dbeddd0d 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.0E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_15970 9eb5a6979baa255c9530f823dbeddd0d 332 SUPERFAMILY SSF53822 61 332 3.14E-77 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_15970 9eb5a6979baa255c9530f823dbeddd0d 332 Gene3D G3DSA:1.10.260.40 1 60 1.7E-22 T 11-10-2018 AMS64_15970 9eb5a6979baa255c9530f823dbeddd0d 332 Pfam PF13377 Periplasmic binding protein-like domain 170 331 1.0E-36 T 11-10-2018 AMS64_06975 0888d30ef43639047e769ead21b8fdb7 445 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 445 60.635 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AMS64_06975 0888d30ef43639047e769ead21b8fdb7 445 Pfam PF04996 Succinylarginine dihydrolase 3 444 4.1E-227 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AMS64_06975 0888d30ef43639047e769ead21b8fdb7 445 SUPERFAMILY SSF55909 3 445 3.63E-210 T 11-10-2018 AMS64_06975 0888d30ef43639047e769ead21b8fdb7 445 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 444 2.1E-224 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AMS64_06975 0888d30ef43639047e769ead21b8fdb7 445 Gene3D G3DSA:3.75.10.20 1 445 2.4E-209 T 11-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AMS64_06640 dc7f3572ceb3ea1ad240199ba372a8f0 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 2.6E-216 T 11-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AMS64_06640 dc7f3572ceb3ea1ad240199ba372a8f0 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_06640 dc7f3572ceb3ea1ad240199ba372a8f0 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.059 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMS64_06640 dc7f3572ceb3ea1ad240199ba372a8f0 405 Pfam PF00202 Aminotransferase class-III 19 399 1.3E-129 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_06640 dc7f3572ceb3ea1ad240199ba372a8f0 405 Gene3D G3DSA:3.40.640.10 59 304 2.4E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_06640 dc7f3572ceb3ea1ad240199ba372a8f0 405 PIRSF PIRSF000521 173 402 6.5E-35 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_06640 dc7f3572ceb3ea1ad240199ba372a8f0 405 PIRSF PIRSF000521 28 156 1.5E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_06640 dc7f3572ceb3ea1ad240199ba372a8f0 405 SUPERFAMILY SSF53383 16 400 6.97E-127 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_06640 dc7f3572ceb3ea1ad240199ba372a8f0 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 3.4E-151 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMS64_06640 dc7f3572ceb3ea1ad240199ba372a8f0 405 Gene3D G3DSA:3.90.1150.10 29 392 2.4E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_06665 b5712f373b5e4c7eda918801ee30adb7 200 SUPERFAMILY SSF56784 12 195 8.14E-53 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_06665 b5712f373b5e4c7eda918801ee30adb7 200 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 12 192 1.9E-50 T 11-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase AMS64_06665 b5712f373b5e4c7eda918801ee30adb7 200 Gene3D G3DSA:3.40.50.1000 14 195 1.1E-51 T 11-10-2018 IPR023214 HAD superfamily AMS64_06665 b5712f373b5e4c7eda918801ee30adb7 200 Gene3D G3DSA:1.10.150.240 25 95 1.1E-51 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMS64_06665 b5712f373b5e4c7eda918801ee30adb7 200 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 192 7.1E-16 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_06665 b5712f373b5e4c7eda918801ee30adb7 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 192 5.4E-34 T 11-10-2018 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 Pfam PF00800 Prephenate dehydratase 104 285 6.4E-55 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 Gene3D G3DSA:1.20.59.10 1 105 3.1E-31 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 5 86 2.7E-26 T 11-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 SUPERFAMILY SSF53850 103 287 9.77E-51 T 11-10-2018 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 SMART SM00830 8 88 3.9E-24 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 Gene3D G3DSA:3.40.190.10 106 279 1.0E-50 T 11-10-2018 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 SUPERFAMILY SSF48600 3 90 4.03E-20 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 SUPERFAMILY SSF55021 278 375 1.14E-24 T 11-10-2018 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 Gene3D G3DSA:3.40.190.10 187 272 1.0E-50 T 11-10-2018 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 323 330 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 PIRSF PIRSF001500 1 378 5.1E-127 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 Gene3D G3DSA:3.30.70.260 290 377 4.5E-25 T 11-10-2018 AMS64_18365 e87f9f5389fb58f2534d2831c7616eb5 390 Pfam PF01817 Chorismate mutase type II 8 86 2.7E-16 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMS64_02145 9c4df8d10bb0a513b94a47471936e1e4 304 Pfam PF03466 LysR substrate binding domain 102 291 6.4E-19 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_02145 9c4df8d10bb0a513b94a47471936e1e4 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 3.1E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_02145 9c4df8d10bb0a513b94a47471936e1e4 304 Gene3D G3DSA:1.10.10.10 10 97 4.8E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_02145 9c4df8d10bb0a513b94a47471936e1e4 304 SUPERFAMILY SSF53850 99 299 9.59E-23 T 11-10-2018 AMS64_02145 9c4df8d10bb0a513b94a47471936e1e4 304 Gene3D G3DSA:3.40.190.290 102 291 1.3E-15 T 11-10-2018 AMS64_02145 9c4df8d10bb0a513b94a47471936e1e4 304 SUPERFAMILY SSF46785 6 92 1.43E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_17830 8a82ca7ea2e89de1249bacd28f89ecc7 441 Pfam PF04225 Opacity-associated protein A LysM-like domain 81 140 1.3E-6 T 11-10-2018 IPR007340 Opacity-associated protein A AMS64_17830 8a82ca7ea2e89de1249bacd28f89ecc7 441 Pfam PF01551 Peptidase family M23 300 393 6.1E-31 T 11-10-2018 IPR016047 Peptidase M23 AMS64_17830 8a82ca7ea2e89de1249bacd28f89ecc7 441 SUPERFAMILY SSF51261 153 395 5.75E-70 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_17830 8a82ca7ea2e89de1249bacd28f89ecc7 441 Gene3D G3DSA:2.70.70.10 271 400 1.6E-81 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_17830 8a82ca7ea2e89de1249bacd28f89ecc7 441 Gene3D G3DSA:3.10.450.350 74 160 2.5E-11 T 11-10-2018 AMS64_17830 8a82ca7ea2e89de1249bacd28f89ecc7 441 Gene3D G3DSA:3.10.450.350 178 415 1.6E-81 T 11-10-2018 AMS64_17830 8a82ca7ea2e89de1249bacd28f89ecc7 441 Pfam PF08525 Opacity-associated protein A N-terminal motif 7 33 7.5E-7 T 11-10-2018 IPR013731 Opacity-associated protein A, N-terminal AMS64_18840 5cb757e86d4f181ba5ed4095fe4c52ff 297 Gene3D G3DSA:3.30.1330.60 134 282 8.4E-46 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_18840 5cb757e86d4f181ba5ed4095fe4c52ff 297 SUPERFAMILY SSF103088 163 280 5.49E-31 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_18840 5cb757e86d4f181ba5ed4095fe4c52ff 297 Pfam PF00691 OmpA family 176 274 1.8E-15 T 11-10-2018 IPR006665 OmpA-like domain AMS64_18840 5cb757e86d4f181ba5ed4095fe4c52ff 297 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 54 6.2E-17 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain AMS64_01260 0a91e9c68de8c535ee71122e539bb178 154 SUPERFAMILY SSF75217 2 152 1.37E-43 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMS64_01260 0a91e9c68de8c535ee71122e539bb178 154 Gene3D G3DSA:3.40.1280.10 1 154 4.4E-66 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMS64_01260 0a91e9c68de8c535ee71122e539bb178 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 1.9E-33 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMS64_01260 0a91e9c68de8c535ee71122e539bb178 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.447 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AMS64_01260 0a91e9c68de8c535ee71122e539bb178 154 PIRSF PIRSF029256 1 154 1.6E-65 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AMS64_01260 0a91e9c68de8c535ee71122e539bb178 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 5.9E-63 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AMS64_14970 6367fb6ae1410962a06b049de2253c7a 365 Gene3D G3DSA:2.40.30.110 278 365 1.4E-33 T 11-10-2018 AMS64_14970 6367fb6ae1410962a06b049de2253c7a 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 354 1.4E-19 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMS64_14970 6367fb6ae1410962a06b049de2253c7a 365 Gene3D G3DSA:4.10.1250.10 232 275 1.1E-24 T 11-10-2018 AMS64_14970 6367fb6ae1410962a06b049de2253c7a 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 360 2.2E-148 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AMS64_14970 6367fb6ae1410962a06b049de2253c7a 365 SUPERFAMILY SSF103025 2 277 2.35E-89 T 11-10-2018 AMS64_14970 6367fb6ae1410962a06b049de2253c7a 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 253 2.5E-84 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AMS64_14970 6367fb6ae1410962a06b049de2253c7a 365 Gene3D G3DSA:3.30.1360.120 7 231 2.9E-85 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMS64_14970 6367fb6ae1410962a06b049de2253c7a 365 SUPERFAMILY SSF101790 270 362 2.45E-26 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMS64_14970 6367fb6ae1410962a06b049de2253c7a 365 Gene3D G3DSA:3.30.70.1400 51 138 2.9E-85 T 11-10-2018 AMS64_14970 6367fb6ae1410962a06b049de2253c7a 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 360 43.452 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMS64_14970 6367fb6ae1410962a06b049de2253c7a 365 PIRSF PIRSF006487 1 364 1.7E-81 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AMS64_10100 601a73831225f8c85fbbb136b8e4f32e 521 SUPERFAMILY SSF53649 24 470 1.12E-118 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMS64_10100 601a73831225f8c85fbbb136b8e4f32e 521 Gene3D G3DSA:3.40.720.10 24 430 2.8E-98 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMS64_10100 601a73831225f8c85fbbb136b8e4f32e 521 Pfam PF00884 Sulfatase 27 353 4.9E-66 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 Pfam PF03104 DNA polymerase family B, exonuclease domain 192 320 3.2E-13 T 11-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 439 452 1.7E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 511 523 1.7E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 563 571 1.7E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 Gene3D G3DSA:3.90.1600.10 481 657 8.8E-53 T 11-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 Gene3D G3DSA:3.90.1600.10 372 469 1.1E-30 T 11-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 Gene3D G3DSA:3.30.70.2250 57 124 1.2E-33 T 11-10-2018 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 SUPERFAMILY SSF56672 409 802 8.9E-117 T 11-10-2018 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 SMART SM00486 172 577 5.7E-69 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 Pfam PF00136 DNA polymerase family B 402 760 3.7E-41 T 11-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 ProSitePatterns PS00116 DNA polymerase family B signature. 565 573 - T 11-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 Gene3D G3DSA:1.10.132.60 664 808 9.2E-59 T 11-10-2018 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 Gene3D G3DSA:2.40.50.590 16 165 1.2E-33 T 11-10-2018 AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 SUPERFAMILY SSF53098 15 413 2.63E-80 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_08555 0e65f05c6c7d2356be4846b18c656056 808 Gene3D G3DSA:3.30.420.10 175 370 1.4E-66 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_19090 850c4133601ea899975b1a7746a17148 254 Pfam PF11932 Protein of unknown function (DUF3450) 10 248 1.1E-89 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AMS64_19090 850c4133601ea899975b1a7746a17148 254 PIRSF PIRSF028069 2 254 2.5E-87 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AMS64_19085 4ed1134607398f24023a3c5db532c944 457 PIRSF PIRSF037714 2 457 4.7E-159 T 11-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AMS64_19085 4ed1134607398f24023a3c5db532c944 457 Pfam PF01618 MotA/TolQ/ExbB proton channel family 330 436 4.4E-29 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMS64_10135 4b45a40d62eeb2b0083b9f6bb02e3523 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 2.5E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_10135 4b45a40d62eeb2b0083b9f6bb02e3523 311 SUPERFAMILY SSF53850 91 298 1.07E-37 T 11-10-2018 AMS64_10135 4b45a40d62eeb2b0083b9f6bb02e3523 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 4.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_10135 4b45a40d62eeb2b0083b9f6bb02e3523 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 4.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_10135 4b45a40d62eeb2b0083b9f6bb02e3523 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 4.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_10135 4b45a40d62eeb2b0083b9f6bb02e3523 311 Pfam PF03466 LysR substrate binding domain 96 298 1.3E-19 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_10135 4b45a40d62eeb2b0083b9f6bb02e3523 311 SUPERFAMILY SSF46785 5 85 3.63E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_10135 4b45a40d62eeb2b0083b9f6bb02e3523 311 Gene3D G3DSA:1.10.10.10 2 90 1.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_10135 4b45a40d62eeb2b0083b9f6bb02e3523 311 Gene3D G3DSA:3.40.190.10 91 294 6.8E-48 T 11-10-2018 AMS64_10135 4b45a40d62eeb2b0083b9f6bb02e3523 311 Gene3D G3DSA:3.40.190.10 172 270 6.8E-48 T 11-10-2018 AMS64_02570 b6f0b683634776691656667f5f6fe17b 216 SUPERFAMILY SSF51306 82 208 1.22E-21 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMS64_02570 b6f0b683634776691656667f5f6fe17b 216 SMART SM00530 5 60 3.5E-20 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_02570 b6f0b683634776691656667f5f6fe17b 216 Pfam PF00717 Peptidase S24-like 127 176 7.2E-13 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMS64_02570 b6f0b683634776691656667f5f6fe17b 216 SUPERFAMILY SSF47413 3 66 1.45E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_02570 b6f0b683634776691656667f5f6fe17b 216 Pfam PF01381 Helix-turn-helix 6 60 1.3E-18 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_02570 b6f0b683634776691656667f5f6fe17b 216 Gene3D G3DSA:1.10.260.40 2 64 3.1E-24 T 11-10-2018 AMS64_02570 b6f0b683634776691656667f5f6fe17b 216 Gene3D G3DSA:2.10.109.10 79 214 1.6E-38 T 11-10-2018 AMS64_00420 c3bc15b0461d8412005fb634401d3af7 367 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AMS64_00420 c3bc15b0461d8412005fb634401d3af7 367 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AMS64_00420 c3bc15b0461d8412005fb634401d3af7 367 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 3 356 3.0E-115 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMS64_00420 c3bc15b0461d8412005fb634401d3af7 367 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 367 95.56 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMS64_00420 c3bc15b0461d8412005fb634401d3af7 367 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 352 5.2E-32 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMS64_00420 c3bc15b0461d8412005fb634401d3af7 367 SUPERFAMILY SSF52540 3 359 1.71E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00420 c3bc15b0461d8412005fb634401d3af7 367 Gene3D G3DSA:3.40.50.300 6 332 8.2E-83 T 11-10-2018 AMS64_00420 c3bc15b0461d8412005fb634401d3af7 367 Gene3D G3DSA:1.20.1050.90 120 297 8.2E-83 T 11-10-2018 AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 SMART SM01185 67 122 4.8E-18 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 122 1.9E-15 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 SUPERFAMILY SSF50249 130 187 9.42E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 Gene3D G3DSA:2.30.30.30 1 62 1.0E-18 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 187 1.2E-58 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 PIRSF PIRSF005901 1 188 2.6E-53 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 Pfam PF09285 Elongation factor P, C-terminal 130 186 2.8E-18 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 Hamap MF_00141 Elongation factor P [efp]. 1 187 45.538 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 SUPERFAMILY SSF50249 65 128 8.57E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 SMART SM00841 130 186 2.3E-19 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 Gene3D G3DSA:2.40.50.140 129 188 1.7E-22 T 11-10-2018 AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 SUPERFAMILY SSF50104 1 63 3.86E-17 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 Gene3D G3DSA:2.40.50.140 64 128 9.3E-23 T 11-10-2018 AMS64_06380 b823c38c0ba4420b32c865a6b39f841b 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 2.4E-19 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like AMS64_06815 f26aeb44d8eaf240059183c0315ecf20 419 SUPERFAMILY SSF69742 1 156 1.83E-47 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMS64_06815 f26aeb44d8eaf240059183c0315ecf20 419 Gene3D G3DSA:3.40.50.720 159 311 1.9E-43 T 11-10-2018 AMS64_06815 f26aeb44d8eaf240059183c0315ecf20 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMS64_06815 f26aeb44d8eaf240059183c0315ecf20 419 SUPERFAMILY SSF51735 160 313 1.03E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_06815 f26aeb44d8eaf240059183c0315ecf20 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 31.353 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMS64_06815 f26aeb44d8eaf240059183c0315ecf20 419 Gene3D G3DSA:3.30.460.30 1 156 2.1E-57 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMS64_06815 f26aeb44d8eaf240059183c0315ecf20 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.0E-49 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMS64_06815 f26aeb44d8eaf240059183c0315ecf20 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 409 9.7E-25 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMS64_06815 f26aeb44d8eaf240059183c0315ecf20 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 8.4E-49 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMS64_06815 f26aeb44d8eaf240059183c0315ecf20 419 SUPERFAMILY SSF69075 315 415 1.31E-28 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMS64_06815 f26aeb44d8eaf240059183c0315ecf20 419 PIRSF PIRSF000445 1 419 4.3E-154 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMS64_06815 f26aeb44d8eaf240059183c0315ecf20 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 414 1.1E-143 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMS64_12350 cc6218ff5c884784870a3c8fbd2f83a9 331 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 319 9.8E-86 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AMS64_12350 cc6218ff5c884784870a3c8fbd2f83a9 331 SUPERFAMILY SSF52540 48 177 7.59E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_12350 cc6218ff5c884784870a3c8fbd2f83a9 331 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 12 318 2.7E-110 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AMS64_12350 cc6218ff5c884784870a3c8fbd2f83a9 331 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 41.747 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AMS64_19515 4ca9b0f65846c846fd8e09040469bd48 148 PIRSF PIRSF000714 1 139 5.8E-52 T 11-10-2018 IPR026026 Histidine triad hydrolase, Hint-type AMS64_19515 4ca9b0f65846c846fd8e09040469bd48 148 Pfam PF01230 HIT domain 9 97 4.1E-15 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AMS64_19515 4ca9b0f65846c846fd8e09040469bd48 148 Gene3D G3DSA:3.30.428.10 1 145 1.3E-41 T 11-10-2018 IPR036265 HIT-like superfamily AMS64_19515 4ca9b0f65846c846fd8e09040469bd48 148 SUPERFAMILY SSF54197 1 134 1.3E-34 T 11-10-2018 IPR036265 HIT-like superfamily AMS64_03045 8357051f8c6caa1fad69f5e7660507e3 566 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 10 561 2.5E-74 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_03045 8357051f8c6caa1fad69f5e7660507e3 566 PRINTS PR01009 Flagellar M-ring protein signature 117 135 2.4E-29 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_03045 8357051f8c6caa1fad69f5e7660507e3 566 PRINTS PR01009 Flagellar M-ring protein signature 149 163 2.4E-29 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_03045 8357051f8c6caa1fad69f5e7660507e3 566 PRINTS PR01009 Flagellar M-ring protein signature 265 283 2.4E-29 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_03045 8357051f8c6caa1fad69f5e7660507e3 566 PRINTS PR01009 Flagellar M-ring protein signature 193 211 2.4E-29 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_03045 8357051f8c6caa1fad69f5e7660507e3 566 PRINTS PR01009 Flagellar M-ring protein signature 349 373 2.4E-29 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_03045 8357051f8c6caa1fad69f5e7660507e3 566 PIRSF PIRSF004862 2 565 8.5E-120 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_03045 8357051f8c6caa1fad69f5e7660507e3 566 Pfam PF08345 Flagellar M-ring protein C-terminal 252 418 1.1E-35 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal AMS64_03045 8357051f8c6caa1fad69f5e7660507e3 566 Gene3D G3DSA:3.30.300.30 116 218 3.1E-14 T 11-10-2018 AMS64_03045 8357051f8c6caa1fad69f5e7660507e3 566 Pfam PF01514 Secretory protein of YscJ/FliF family 26 217 1.7E-63 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF AMS64_01475 35754ca61cbe5456b059e355f05b4ef3 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 3.8E-72 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMS64_01475 35754ca61cbe5456b059e355f05b4ef3 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 721 0.0 T 11-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AMS64_01475 35754ca61cbe5456b059e355f05b4ef3 723 Gene3D G3DSA:1.10.486.10 382 538 3.7E-131 T 11-10-2018 AMS64_01475 35754ca61cbe5456b059e355f05b4ef3 723 Gene3D G3DSA:1.10.10.160 114 187 1.9E-99 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AMS64_01475 35754ca61cbe5456b059e355f05b4ef3 723 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 3.3E-77 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMS64_01475 35754ca61cbe5456b059e355f05b4ef3 723 Gene3D G3DSA:3.40.50.300 281 636 3.7E-131 T 11-10-2018 AMS64_01475 35754ca61cbe5456b059e355f05b4ef3 723 Gene3D G3DSA:3.40.50.300 10 273 1.9E-99 T 11-10-2018 AMS64_01475 35754ca61cbe5456b059e355f05b4ef3 723 SUPERFAMILY SSF52540 6 642 1.0E-178 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_17400 18e8bdd6e82ff1a044c5dfd22f9084f2 88 SUPERFAMILY SSF47413 4 64 5.63E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_17400 18e8bdd6e82ff1a044c5dfd22f9084f2 88 Pfam PF01381 Helix-turn-helix 12 58 5.0E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_17400 18e8bdd6e82ff1a044c5dfd22f9084f2 88 SMART SM00530 11 68 1.1E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_17400 18e8bdd6e82ff1a044c5dfd22f9084f2 88 Gene3D G3DSA:1.10.260.40 4 87 9.8E-23 T 11-10-2018 AMS64_08535 74e4e2a8d7db30e69f64542b44202b0d 286 Gene3D G3DSA:3.30.200.20 16 126 6.1E-5 T 11-10-2018 AMS64_08535 74e4e2a8d7db30e69f64542b44202b0d 286 Pfam PF01163 RIO1 family 30 221 3.1E-42 T 11-10-2018 AMS64_08535 74e4e2a8d7db30e69f64542b44202b0d 286 SMART SM00090 7 228 3.3E-11 T 11-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 AMS64_08535 74e4e2a8d7db30e69f64542b44202b0d 286 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 11-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 AMS64_08535 74e4e2a8d7db30e69f64542b44202b0d 286 Gene3D G3DSA:1.10.510.10 141 223 3.4E-19 T 11-10-2018 AMS64_08535 74e4e2a8d7db30e69f64542b44202b0d 286 SUPERFAMILY SSF56112 18 225 2.5E-21 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 Gene3D G3DSA:1.20.120.1080 370 459 4.6E-9 T 11-10-2018 AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 Pfam PF00270 DEAD/DEAH box helicase 19 162 1.6E-7 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 Pfam PF04408 Helicase associated domain (HA2) 388 452 1.6E-11 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 Pfam PF00271 Helicase conserved C-terminal domain 208 328 1.7E-12 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 PIRSF PIRSF005496 1 814 1.2E-301 T 11-10-2018 AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 Gene3D G3DSA:3.40.50.300 180 348 2.1E-52 T 11-10-2018 AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 SMART SM00490 226 328 1.9E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 Gene3D G3DSA:3.40.50.300 1 179 7.4E-50 T 11-10-2018 AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 SMART SM00847 387 498 5.2E-11 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 SMART SM00487 2 188 2.5E-16 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 Pfam PF08482 ATP-dependent helicase C-terminal 668 800 1.4E-51 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 812 0.0 T 11-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 AMS64_04795 782a8151fcb02011de8c32fff2ec6444 815 SUPERFAMILY SSF52540 16 339 3.53E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09875 bc4a875e78b2c0cd8c2f8cbc240ee2a3 328 Gene3D G3DSA:3.40.50.2300 156 328 6.2E-27 T 11-10-2018 AMS64_09875 bc4a875e78b2c0cd8c2f8cbc240ee2a3 328 SUPERFAMILY SSF53822 61 315 2.36E-40 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_09875 bc4a875e78b2c0cd8c2f8cbc240ee2a3 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AMS64_09875 bc4a875e78b2c0cd8c2f8cbc240ee2a3 328 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 3 327 9.3E-123 T 11-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AMS64_09875 bc4a875e78b2c0cd8c2f8cbc240ee2a3 328 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 247 6.3E-12 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AMS64_09875 bc4a875e78b2c0cd8c2f8cbc240ee2a3 328 SMART SM00354 1 74 4.3E-29 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_09875 bc4a875e78b2c0cd8c2f8cbc240ee2a3 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 51 3.6E-16 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_09875 bc4a875e78b2c0cd8c2f8cbc240ee2a3 328 Gene3D G3DSA:3.40.50.2300 63 153 1.3E-20 T 11-10-2018 AMS64_09875 bc4a875e78b2c0cd8c2f8cbc240ee2a3 328 SUPERFAMILY SSF47413 3 59 8.66E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_09875 bc4a875e78b2c0cd8c2f8cbc240ee2a3 328 Gene3D G3DSA:1.10.260.40 2 62 1.9E-24 T 11-10-2018 AMS64_19395 742e6e211f6be90e43112cecdc55a730 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 6 60 9.3E-19 T 11-10-2018 IPR019201 Protein of unknown function DUF2065 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 Pfam PF02872 5'-nucleotidase, C-terminal domain 380 528 4.5E-31 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 SUPERFAMILY SSF55816 380 555 8.76E-41 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 Pfam PF00149 Calcineurin-like phosphoesterase 39 260 5.3E-19 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 Gene3D G3DSA:3.90.780.10 380 564 9.9E-46 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 SUPERFAMILY SSF56300 35 357 1.39E-86 T 11-10-2018 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 ProSitePatterns PS00785 5'-nucleotidase signature 1. 39 51 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 Gene3D G3DSA:3.60.21.10 33 379 2.3E-110 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 PRINTS PR01607 Apyrase family signature 434 457 5.9E-46 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 PRINTS PR01607 Apyrase family signature 503 522 5.9E-46 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 PRINTS PR01607 Apyrase family signature 244 267 5.9E-46 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 PRINTS PR01607 Apyrase family signature 37 55 5.9E-46 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 PRINTS PR01607 Apyrase family signature 213 230 5.9E-46 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_05770 b126b802e05af0881a286a5bfee7ca73 574 PRINTS PR01607 Apyrase family signature 290 310 5.9E-46 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_09775 e249958ff57fae035363f654d63840f6 259 PIRSF PIRSF005902 1 259 1.9E-81 T 11-10-2018 IPR001130 TatD family GO:0016788 AMS64_09775 e249958ff57fae035363f654d63840f6 259 SUPERFAMILY SSF51556 1 257 6.81E-87 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_09775 e249958ff57fae035363f654d63840f6 259 Pfam PF01026 TatD related DNase 4 255 2.2E-77 T 11-10-2018 IPR001130 TatD family GO:0016788 AMS64_09775 e249958ff57fae035363f654d63840f6 259 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMS64_09775 e249958ff57fae035363f654d63840f6 259 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 255 2.3E-89 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AMS64_09775 e249958ff57fae035363f654d63840f6 259 Gene3D G3DSA:3.20.20.140 1 259 4.1E-96 T 11-10-2018 AMS64_09775 e249958ff57fae035363f654d63840f6 259 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMS64_04775 df255cecd3260abc2a19ec8d9cbff657 128 SUPERFAMILY SSF103481 12 114 4.84E-13 T 11-10-2018 AMS64_04775 df255cecd3260abc2a19ec8d9cbff657 128 Pfam PF00893 Small Multidrug Resistance protein 11 100 1.5E-15 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AMS64_04775 df255cecd3260abc2a19ec8d9cbff657 128 Gene3D G3DSA:1.10.3730.20 9 115 1.1E-24 T 11-10-2018 AMS64_10300 b59955b0079008bb613bdd01c1a22597 83 Gene3D G3DSA:2.40.50.970 1 80 1.9E-28 T 11-10-2018 IPR037254 HupF/HypC superfamily AMS64_10300 b59955b0079008bb613bdd01c1a22597 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 59 71 1.1E-15 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AMS64_10300 b59955b0079008bb613bdd01c1a22597 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.1E-15 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AMS64_10300 b59955b0079008bb613bdd01c1a22597 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 41 57 1.1E-15 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AMS64_10300 b59955b0079008bb613bdd01c1a22597 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 19 35 1.1E-15 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AMS64_10300 b59955b0079008bb613bdd01c1a22597 83 SUPERFAMILY SSF159127 1 79 4.19E-24 T 11-10-2018 IPR037254 HupF/HypC superfamily AMS64_10300 b59955b0079008bb613bdd01c1a22597 83 Pfam PF01455 HupF/HypC family 1 67 3.1E-23 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AMS64_10300 b59955b0079008bb613bdd01c1a22597 83 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 79 9.8E-25 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AMS64_18910 b298710bf55a7883441b78d2b7dc2117 369 Gene3D G3DSA:3.40.50.10990 206 368 8.2E-29 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMS64_18910 b298710bf55a7883441b78d2b7dc2117 369 PIRSF PIRSF001259 1 368 3.7E-129 T 11-10-2018 AMS64_18910 b298710bf55a7883441b78d2b7dc2117 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 199 2.1E-74 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_18910 b298710bf55a7883441b78d2b7dc2117 369 SUPERFAMILY SSF142695 205 367 2.22E-47 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMS64_18910 b298710bf55a7883441b78d2b7dc2117 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 2.9E-83 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_18910 b298710bf55a7883441b78d2b7dc2117 369 SUPERFAMILY SSF55821 3 203 1.44E-86 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMS64_18910 b298710bf55a7883441b78d2b7dc2117 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.638 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_18910 b298710bf55a7883441b78d2b7dc2117 369 Gene3D G3DSA:3.90.870.10 1 205 4.8E-87 T 11-10-2018 AMS64_18910 b298710bf55a7883441b78d2b7dc2117 369 Pfam PF00925 GTP cyclohydrolase II 208 367 2.4E-37 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMS64_07085 c585374749917977f875b05476096a61 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 256 1.3E-13 T 11-10-2018 IPR000014 PAS domain AMS64_07085 c585374749917977f875b05476096a61 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 31 135 2.2E-12 T 11-10-2018 IPR000014 PAS domain AMS64_07085 c585374749917977f875b05476096a61 431 SMART SM00091 139 207 17.0 T 11-10-2018 IPR000014 PAS domain AMS64_07085 c585374749917977f875b05476096a61 431 SMART SM00091 18 91 2.1 T 11-10-2018 IPR000014 PAS domain AMS64_07085 c585374749917977f875b05476096a61 431 SUPERFAMILY SSF55785 30 131 4.89E-19 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_07085 c585374749917977f875b05476096a61 431 Gene3D G3DSA:3.30.450.20 124 244 2.0E-15 T 11-10-2018 AMS64_07085 c585374749917977f875b05476096a61 431 Gene3D G3DSA:3.30.450.20 5 123 1.8E-16 T 11-10-2018 AMS64_07085 c585374749917977f875b05476096a61 431 SUPERFAMILY SSF58104 246 430 6.41E-52 T 11-10-2018 AMS64_07085 c585374749917977f875b05476096a61 431 SMART SM00086 212 254 0.018 T 11-10-2018 IPR001610 PAC motif AMS64_07085 c585374749917977f875b05476096a61 431 SMART SM00086 93 134 0.93 T 11-10-2018 IPR001610 PAC motif AMS64_07085 c585374749917977f875b05476096a61 431 Gene3D G3DSA:1.10.287.950 245 431 1.4E-41 T 11-10-2018 AMS64_07085 c585374749917977f875b05476096a61 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 323 350 3.4E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_07085 c585374749917977f875b05476096a61 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 352 381 3.4E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_07085 c585374749917977f875b05476096a61 431 Pfam PF13426 PAS domain 34 133 3.0E-11 T 11-10-2018 IPR000014 PAS domain AMS64_07085 c585374749917977f875b05476096a61 431 Pfam PF13426 PAS domain 158 253 4.2E-9 T 11-10-2018 IPR000014 PAS domain AMS64_07085 c585374749917977f875b05476096a61 431 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 300 430 1.7E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_07085 c585374749917977f875b05476096a61 431 SUPERFAMILY SSF55785 152 254 7.68E-19 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_07085 c585374749917977f875b05476096a61 431 SMART SM00283 236 430 1.1E-13 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_12500 0637ea70f286e08b9d7bc6663bec77d7 321 SUPERFAMILY SSF56281 39 310 5.15E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_12500 0637ea70f286e08b9d7bc6663bec77d7 321 Pfam PF12706 Beta-lactamase superfamily domain 67 278 3.0E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_12500 0637ea70f286e08b9d7bc6663bec77d7 321 Gene3D G3DSA:3.60.15.10 38 320 3.0E-42 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_08485 9d2fafa38bf2a9afb1bfd886e3bf0883 314 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMS64_08485 9d2fafa38bf2a9afb1bfd886e3bf0883 314 SUPERFAMILY SSF51395 1 308 1.08E-71 T 11-10-2018 AMS64_08485 9d2fafa38bf2a9afb1bfd886e3bf0883 314 PIRSF PIRSF006621 1 314 3.9E-78 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMS64_08485 9d2fafa38bf2a9afb1bfd886e3bf0883 314 Gene3D G3DSA:3.20.20.70 1 240 2.7E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_08485 9d2fafa38bf2a9afb1bfd886e3bf0883 314 Pfam PF01207 Dihydrouridine synthase (Dus) 4 281 3.2E-78 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMS64_08485 9d2fafa38bf2a9afb1bfd886e3bf0883 314 Gene3D G3DSA:1.20.225.30 242 311 2.0E-20 T 11-10-2018 AMS64_08485 9d2fafa38bf2a9afb1bfd886e3bf0883 314 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 309 53.345 T 11-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AMS64_02820 b67ded534646b30145517a2b01507dde 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 5.3E-120 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AMS64_02820 b67ded534646b30145517a2b01507dde 241 SMART SM00382 28 202 5.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_02820 b67ded534646b30145517a2b01507dde 241 Gene3D G3DSA:3.40.50.300 2 241 1.2E-67 T 11-10-2018 AMS64_02820 b67ded534646b30145517a2b01507dde 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_02820 b67ded534646b30145517a2b01507dde 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 4.2E-8 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMS64_02820 b67ded534646b30145517a2b01507dde 241 Pfam PF00005 ABC transporter 20 166 1.4E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_02820 b67ded534646b30145517a2b01507dde 241 SUPERFAMILY SSF52540 3 236 5.58E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_03615 4de6160fd4037dc305ddb8f0b0ca8a84 275 Gene3D G3DSA:3.40.710.10 20 275 6.8E-73 T 11-10-2018 AMS64_03615 4de6160fd4037dc305ddb8f0b0ca8a84 275 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 256 2.0E-65 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMS64_03615 4de6160fd4037dc305ddb8f0b0ca8a84 275 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 2.6E-12 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMS64_03615 4de6160fd4037dc305ddb8f0b0ca8a84 275 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 139 152 2.6E-12 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMS64_03615 4de6160fd4037dc305ddb8f0b0ca8a84 275 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 112 129 2.6E-12 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMS64_03615 4de6160fd4037dc305ddb8f0b0ca8a84 275 SUPERFAMILY SSF56601 9 274 1.24E-65 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMS64_02055 d665b7c8aa5fea48d54f397197c98b9a 145 Gene3D G3DSA:3.100.10.10 71 145 1.8E-11 T 11-10-2018 AMS64_02055 d665b7c8aa5fea48d54f397197c98b9a 145 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 1.0E-26 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P AMS64_02055 d665b7c8aa5fea48d54f397197c98b9a 145 SUPERFAMILY SSF52080 4 144 5.1E-41 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily AMS64_02055 d665b7c8aa5fea48d54f397197c98b9a 145 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 1.7E-42 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02055 d665b7c8aa5fea48d54f397197c98b9a 145 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02055 d665b7c8aa5fea48d54f397197c98b9a 145 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 17.506 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 Gene3D G3DSA:3.30.70.890 187 296 1.8E-84 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 Pfam PF00288 GHMP kinases N terminal domain 103 169 1.9E-12 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 SUPERFAMILY SSF54211 17 204 1.21E-27 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 109 120 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 Hamap MF_00384 Homoserine kinase [thrB]. 18 327 27.533 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 Gene3D G3DSA:3.30.230.10 19 186 1.8E-84 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 PRINTS PR00958 Homoserine kinase signature 273 288 5.2E-30 T 11-10-2018 AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 PRINTS PR00958 Homoserine kinase signature 23 38 5.2E-30 T 11-10-2018 AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 PRINTS PR00958 Homoserine kinase signature 116 131 5.2E-30 T 11-10-2018 AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 PRINTS PR00958 Homoserine kinase signature 156 169 5.2E-30 T 11-10-2018 AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 PRINTS PR00958 Homoserine kinase signature 194 211 5.2E-30 T 11-10-2018 AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 Pfam PF08544 GHMP kinases C terminal 246 307 3.6E-8 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 TIGRFAM TIGR00191 thrB: homoserine kinase 18 327 8.4E-93 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 PIRSF PIRSF000676 13 329 1.3E-76 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AMS64_16820 14d6ce0f17d1a244423ce19f05d1e0eb 331 SUPERFAMILY SSF55060 191 307 2.19E-27 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMS64_21185 6ef5c61ad16f4fede68d5efed8d134ec 222 Pfam PF00072 Response regulator receiver domain 3 112 1.4E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_21185 6ef5c61ad16f4fede68d5efed8d134ec 222 Gene3D G3DSA:1.10.10.10 125 222 2.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_21185 6ef5c61ad16f4fede68d5efed8d134ec 222 SMART SM00448 1 112 5.6E-42 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_21185 6ef5c61ad16f4fede68d5efed8d134ec 222 Gene3D G3DSA:3.40.50.2300 1 120 4.0E-37 T 11-10-2018 AMS64_21185 6ef5c61ad16f4fede68d5efed8d134ec 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 219 1.4E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_21185 6ef5c61ad16f4fede68d5efed8d134ec 222 SMART SM00862 145 219 4.3E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_21185 6ef5c61ad16f4fede68d5efed8d134ec 222 SUPERFAMILY SSF52172 1 115 7.97E-39 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_21185 6ef5c61ad16f4fede68d5efed8d134ec 222 SUPERFAMILY SSF46894 123 220 1.45E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_18490 ab55c06a485690f13e4c577faa4f7121 670 Gene3D G3DSA:3.40.50.300 378 632 1.3E-10 T 11-10-2018 AMS64_18490 ab55c06a485690f13e4c577faa4f7121 670 Gene3D G3DSA:3.40.50.300 1 280 3.3E-23 T 11-10-2018 AMS64_18490 ab55c06a485690f13e4c577faa4f7121 670 Pfam PF13476 AAA domain 5 228 5.9E-12 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain AMS64_18490 ab55c06a485690f13e4c577faa4f7121 670 SUPERFAMILY SSF52540 1 623 4.6E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_18490 ab55c06a485690f13e4c577faa4f7121 670 TIGRFAM TIGR03185 DNA_S_dndD: DNA sulfur modification protein DndD 1 658 6.2E-144 T 11-10-2018 IPR017599 DNA sulphur modification protein DndD AMS64_04130 0bdbd05890150af1d72f8af3b61716db 285 SUPERFAMILY SSF103481 40 138 1.01E-14 T 11-10-2018 AMS64_04130 0bdbd05890150af1d72f8af3b61716db 285 SUPERFAMILY SSF103481 179 276 1.07E-11 T 11-10-2018 AMS64_04130 0bdbd05890150af1d72f8af3b61716db 285 Pfam PF00892 EamA-like transporter family 143 270 6.5E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_04130 0bdbd05890150af1d72f8af3b61716db 285 Pfam PF00892 EamA-like transporter family 6 136 1.2E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_13465 57f208f2a4320d5136dca4cb020ada29 174 Pfam PF01967 MoaC family 24 159 2.6E-56 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_13465 57f208f2a4320d5136dca4cb020ada29 174 Gene3D G3DSA:3.30.70.640 11 169 2.0E-72 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_13465 57f208f2a4320d5136dca4cb020ada29 174 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 13 161 8.6E-70 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_13465 57f208f2a4320d5136dca4cb020ada29 174 SUPERFAMILY SSF55040 20 164 6.93E-62 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_13465 57f208f2a4320d5136dca4cb020ada29 174 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 11 167 36.729 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMS64_14630 6497661a4ae5cdba28b04f9cf9de52ce 328 SMART SM00829 13 325 4.0E-12 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMS64_14630 6497661a4ae5cdba28b04f9cf9de52ce 328 Gene3D G3DSA:3.90.180.10 9 295 1.5E-89 T 11-10-2018 AMS64_14630 6497661a4ae5cdba28b04f9cf9de52ce 328 Gene3D G3DSA:3.40.50.720 125 261 1.5E-89 T 11-10-2018 AMS64_14630 6497661a4ae5cdba28b04f9cf9de52ce 328 Pfam PF00107 Zinc-binding dehydrogenase 156 244 4.7E-9 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMS64_14630 6497661a4ae5cdba28b04f9cf9de52ce 328 SUPERFAMILY SSF50129 4 151 6.54E-33 T 11-10-2018 IPR011032 GroES-like superfamily AMS64_14630 6497661a4ae5cdba28b04f9cf9de52ce 328 SUPERFAMILY SSF51735 117 265 3.08E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_14630 6497661a4ae5cdba28b04f9cf9de52ce 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 90 8.7E-5 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMS64_01340 ae82815c0748b2f509d522eb6c1df8f5 406 Gene3D G3DSA:3.40.640.10 37 297 2.5E-169 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_01340 ae82815c0748b2f509d522eb6c1df8f5 406 Gene3D G3DSA:3.90.1150.10 10 399 2.5E-169 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_01340 ae82815c0748b2f509d522eb6c1df8f5 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 218 237 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMS64_01340 ae82815c0748b2f509d522eb6c1df8f5 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 8 406 9.1E-171 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AMS64_01340 ae82815c0748b2f509d522eb6c1df8f5 406 Pfam PF00266 Aminotransferase class-V 26 395 4.9E-148 T 11-10-2018 IPR000192 Aminotransferase class V domain AMS64_01340 ae82815c0748b2f509d522eb6c1df8f5 406 PIRSF PIRSF005572 23 404 2.1E-50 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AMS64_01340 ae82815c0748b2f509d522eb6c1df8f5 406 SUPERFAMILY SSF53383 6 402 6.05E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 SUPERFAMILY SSF81271 395 461 5.01E-21 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 Pfam PF13291 ACT domain 660 736 1.9E-17 T 11-10-2018 IPR002912 ACT domain AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 Pfam PF13328 HD domain 49 187 6.7E-37 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 Gene3D G3DSA:3.30.70.260 660 737 6.4E-17 T 11-10-2018 AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 SMART SM00954 247 357 6.7E-65 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 SUPERFAMILY SSF109604 51 203 3.77E-42 T 11-10-2018 AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 58 736 6.3E-186 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 Gene3D G3DSA:3.30.460.10 205 337 1.9E-49 T 11-10-2018 AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 Gene3D G3DSA:1.10.3210.10 25 203 1.6E-38 T 11-10-2018 AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 Gene3D G3DSA:3.10.20.30 396 469 3.0E-32 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 SUPERFAMILY SSF55021 664 736 4.93E-12 T 11-10-2018 AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 Pfam PF02824 TGS domain 402 461 9.5E-20 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 Pfam PF04607 Region found in RelA / SpoT proteins 247 356 1.7E-37 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AMS64_04955 7549d8ec7b92d21a209e0ad20a75bda2 737 SUPERFAMILY SSF81301 192 406 1.96E-64 T 11-10-2018 AMS64_06605 270d3f21326219d0b2f2c4169f2e9dba 526 Gene3D G3DSA:3.30.70.1070 430 525 4.4E-27 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMS64_06605 270d3f21326219d0b2f2c4169f2e9dba 526 SUPERFAMILY SSF52540 8 223 6.4E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_06605 270d3f21326219d0b2f2c4169f2e9dba 526 Pfam PF05036 Sporulation related domain 441 512 5.3E-7 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AMS64_18890 469e3665286bd64e814bd8d92c836982 319 Gene3D G3DSA:3.30.1330.10 1 141 6.6E-48 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMS64_18890 469e3665286bd64e814bd8d92c836982 319 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 133 3.5E-23 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AMS64_18890 469e3665286bd64e814bd8d92c836982 319 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 318 29.133 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AMS64_18890 469e3665286bd64e814bd8d92c836982 319 SUPERFAMILY SSF55326 1 133 1.05E-36 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMS64_18890 469e3665286bd64e814bd8d92c836982 319 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 318 1.6E-108 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AMS64_18890 469e3665286bd64e814bd8d92c836982 319 Gene3D G3DSA:3.90.650.10 142 319 2.6E-56 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMS64_18890 469e3665286bd64e814bd8d92c836982 319 SUPERFAMILY SSF56042 140 299 1.11E-38 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMS64_18890 469e3665286bd64e814bd8d92c836982 319 Pfam PF02769 AIR synthase related protein, C-terminal domain 147 296 2.6E-10 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AMS64_18890 469e3665286bd64e814bd8d92c836982 319 PIRSF PIRSF005303 1 318 1.5E-84 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AMS64_17255 2c1c1ad2f7ad7add2ca82c34b66d3910 320 SUPERFAMILY SSF158544 212 262 1.8E-12 T 11-10-2018 IPR038072 GspK, central domain superfamily AMS64_17255 2c1c1ad2f7ad7add2ca82c34b66d3910 320 Gene3D G3DSA:1.10.40.60 213 278 2.6E-85 T 11-10-2018 IPR038072 GspK, central domain superfamily AMS64_17255 2c1c1ad2f7ad7add2ca82c34b66d3910 320 Gene3D G3DSA:1.10.40.60 93 212 2.6E-85 T 11-10-2018 IPR038072 GspK, central domain superfamily AMS64_17255 2c1c1ad2f7ad7add2ca82c34b66d3910 320 Pfam PF03934 Type II secretion system (T2SS), protein K 23 309 2.6E-89 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AMS64_17255 2c1c1ad2f7ad7add2ca82c34b66d3910 320 Gene3D G3DSA:3.30.1300.30 38 303 2.6E-85 T 11-10-2018 AMS64_17255 2c1c1ad2f7ad7add2ca82c34b66d3910 320 SUPERFAMILY SSF54523 29 314 2.82E-28 T 11-10-2018 AMS64_17255 2c1c1ad2f7ad7add2ca82c34b66d3910 320 SUPERFAMILY SSF158544 95 210 4.97E-33 T 11-10-2018 IPR038072 GspK, central domain superfamily AMS64_17255 2c1c1ad2f7ad7add2ca82c34b66d3910 320 PIRSF PIRSF002786 1 320 4.6E-70 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AMS64_10450 eabc8313532533d700560b573a90d967 471 Pfam PF02706 Chain length determinant protein 9 94 8.7E-6 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AMS64_10450 eabc8313532533d700560b573a90d967 471 Pfam PF13807 G-rich domain on putative tyrosine kinase 334 416 8.6E-8 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain AMS64_14540 6ae7dceb4ec850e52742572f86d70608 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 95 2.2E-22 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AMS64_14540 6ae7dceb4ec850e52742572f86d70608 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 19.302 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 Gene3D G3DSA:1.10.579.10 294 473 1.1E-80 T 11-10-2018 AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 Gene3D G3DSA:3.40.50.620 3 205 1.3E-78 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 Pfam PF03441 FAD binding domain of DNA photolyase 276 469 3.5E-83 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 SUPERFAMILY SSF52425 2 189 5.63E-51 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 PRINTS PR00147 DNA photolyase signature 326 342 2.0E-28 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 PRINTS PR00147 DNA photolyase signature 385 399 2.0E-28 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 PRINTS PR00147 DNA photolyase signature 346 364 2.0E-28 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 PRINTS PR00147 DNA photolyase signature 142 158 2.0E-28 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 326 338 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 SUPERFAMILY SSF48173 201 471 6.8E-109 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 Gene3D G3DSA:1.25.40.80 131 290 1.3E-78 T 11-10-2018 AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 Pfam PF00875 DNA photolyase 3 169 1.6E-47 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AMS64_18325 2f098d6ba3efeb3782e421992bcba7fb 473 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 346 365 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMS64_02700 1fb09719490eefa0cd6219753f2ff14c 217 Gene3D G3DSA:3.40.50.1820 1 214 2.6E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_02700 1fb09719490eefa0cd6219753f2ff14c 217 SUPERFAMILY SSF53474 6 215 1.89E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_02700 1fb09719490eefa0cd6219753f2ff14c 217 Pfam PF02230 Phospholipase/Carboxylesterase 9 211 5.1E-38 T 11-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AMS64_05725 7608cd600c24e8f74c92dc25decf0e1a 67 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 5 62 1.0E-21 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AMS64_05725 7608cd600c24e8f74c92dc25decf0e1a 67 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 60 2.9E-15 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AMS64_07790 354002140c4e5df8927fe3fbc25be8da 271 Pfam PF12833 Helix-turn-helix domain 191 267 6.1E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_07790 354002140c4e5df8927fe3fbc25be8da 271 SUPERFAMILY SSF46689 220 268 1.36E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_07790 354002140c4e5df8927fe3fbc25be8da 271 SUPERFAMILY SSF51215 27 149 6.8E-7 T 11-10-2018 IPR037923 Transcription regulator HTH-like AMS64_07790 354002140c4e5df8927fe3fbc25be8da 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 9.5E-8 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_07790 354002140c4e5df8927fe3fbc25be8da 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 9.5E-8 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_07790 354002140c4e5df8927fe3fbc25be8da 271 SMART SM00342 184 267 4.8E-30 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_07790 354002140c4e5df8927fe3fbc25be8da 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_07790 354002140c4e5df8927fe3fbc25be8da 271 Gene3D G3DSA:1.10.10.60 163 270 1.3E-27 T 11-10-2018 AMS64_07790 354002140c4e5df8927fe3fbc25be8da 271 SUPERFAMILY SSF46689 167 217 1.73E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_13765 354002140c4e5df8927fe3fbc25be8da 271 Pfam PF12833 Helix-turn-helix domain 191 267 6.1E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_13765 354002140c4e5df8927fe3fbc25be8da 271 SUPERFAMILY SSF46689 220 268 1.36E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_13765 354002140c4e5df8927fe3fbc25be8da 271 SUPERFAMILY SSF51215 27 149 6.8E-7 T 11-10-2018 IPR037923 Transcription regulator HTH-like AMS64_13765 354002140c4e5df8927fe3fbc25be8da 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 9.5E-8 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_13765 354002140c4e5df8927fe3fbc25be8da 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 9.5E-8 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_13765 354002140c4e5df8927fe3fbc25be8da 271 SMART SM00342 184 267 4.8E-30 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_13765 354002140c4e5df8927fe3fbc25be8da 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_13765 354002140c4e5df8927fe3fbc25be8da 271 Gene3D G3DSA:1.10.10.60 163 270 1.3E-27 T 11-10-2018 AMS64_13765 354002140c4e5df8927fe3fbc25be8da 271 SUPERFAMILY SSF46689 167 217 1.73E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_06265 41bcda72a8464f1e6d7d1d5512fccb17 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 9.7E-12 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMS64_06265 41bcda72a8464f1e6d7d1d5512fccb17 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 9.7E-12 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMS64_06265 41bcda72a8464f1e6d7d1d5512fccb17 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 9.7E-12 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMS64_06265 41bcda72a8464f1e6d7d1d5512fccb17 136 SUPERFAMILY SSF81330 13 127 1.57E-35 T 11-10-2018 IPR036019 Gated mechanosensitive channel AMS64_06265 41bcda72a8464f1e6d7d1d5512fccb17 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 132 24.215 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMS64_06265 41bcda72a8464f1e6d7d1d5512fccb17 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 7.8E-46 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L AMS64_06265 41bcda72a8464f1e6d7d1d5512fccb17 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 6.9E-52 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMS64_06265 41bcda72a8464f1e6d7d1d5512fccb17 136 Gene3D G3DSA:1.10.1200.120 3 134 9.8E-44 T 11-10-2018 IPR036019 Gated mechanosensitive channel AMS64_06265 41bcda72a8464f1e6d7d1d5512fccb17 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 11-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site AMS64_05790 f0e8236348484ae886305ccea63645e8 357 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 7.7E-66 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 PRINTS PR00992 Alanine racemase signature 155 166 1.7E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 PRINTS PR00992 Alanine racemase signature 120 132 1.7E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 PRINTS PR00992 Alanine racemase signature 60 78 1.7E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 PRINTS PR00992 Alanine racemase signature 287 304 1.7E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 PRINTS PR00992 Alanine racemase signature 249 264 1.7E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 PRINTS PR00992 Alanine racemase signature 192 219 1.7E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 PRINTS PR00992 Alanine racemase signature 266 281 1.7E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 PRINTS PR00992 Alanine racemase signature 339 352 1.7E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 PRINTS PR00992 Alanine racemase signature 26 42 1.7E-71 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 Gene3D G3DSA:3.20.20.10 10 217 8.2E-131 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_05790 f0e8236348484ae886305ccea63645e8 357 Pfam PF00842 Alanine racemase, C-terminal domain 233 354 1.1E-40 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 Gene3D G3DSA:2.40.37.10 8 352 8.2E-131 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 SUPERFAMILY SSF50621 226 357 3.84E-46 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 SMART SM01005 233 357 5.6E-65 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 TIGRFAM TIGR00492 alr: alanine racemase 3 357 2.4E-125 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 Hamap MF_01201 Alanine racemase. 1 357 35.295 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_05790 f0e8236348484ae886305ccea63645e8 357 SUPERFAMILY SSF51419 8 234 1.16E-68 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_05790 f0e8236348484ae886305ccea63645e8 357 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_08830 951220c10c6f433f7f8552c0831b5b27 270 Gene3D G3DSA:3.40.50.300 1 260 5.9E-77 T 11-10-2018 AMS64_08830 951220c10c6f433f7f8552c0831b5b27 270 PIRSF PIRSF003092 1 270 1.2E-97 T 11-10-2018 IPR025501 ATP binding protein MinD AMS64_08830 951220c10c6f433f7f8552c0831b5b27 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.7E-112 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AMS64_08830 951220c10c6f433f7f8552c0831b5b27 270 Pfam PF13614 AAA domain 3 157 9.4E-22 T 11-10-2018 IPR025669 AAA domain AMS64_08830 951220c10c6f433f7f8552c0831b5b27 270 SUPERFAMILY SSF52540 1 268 1.49E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_14785 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 Gene3D G3DSA:2.40.50.940 231 363 7.3E-36 T 11-10-2018 AMS64_14785 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_14785 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 Gene3D G3DSA:3.40.50.300 4 230 1.0E-62 T 11-10-2018 AMS64_14785 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 Pfam PF08402 TOBE domain 290 362 1.4E-9 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AMS64_14785 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 Pfam PF00005 ABC transporter 22 164 8.2E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_14785 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 Gene3D G3DSA:2.40.50.140 297 354 7.3E-36 T 11-10-2018 AMS64_14785 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 SMART SM00382 31 214 6.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_14785 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 SUPERFAMILY SSF52540 5 250 4.29E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_14785 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 SUPERFAMILY SSF50331 245 369 3.19E-28 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMS64_08440 95268580b880e5eb6df220dc046ce659 687 SUPERFAMILY SSF51011 580 681 2.81E-18 T 11-10-2018 AMS64_08440 95268580b880e5eb6df220dc046ce659 687 Gene3D G3DSA:3.20.20.80 132 564 5.7E-172 T 11-10-2018 AMS64_08440 95268580b880e5eb6df220dc046ce659 687 SUPERFAMILY SSF81296 6 144 1.43E-36 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_08440 95268580b880e5eb6df220dc046ce659 687 Gene3D G3DSA:2.60.40.10 1 130 5.5E-35 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_08440 95268580b880e5eb6df220dc046ce659 687 SUPERFAMILY SSF51445 130 560 2.28E-125 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_08440 95268580b880e5eb6df220dc046ce659 687 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 101 5.9E-15 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMS64_08440 95268580b880e5eb6df220dc046ce659 687 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 6 651 9.5E-204 T 11-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AMS64_08440 95268580b880e5eb6df220dc046ce659 687 Gene3D G3DSA:2.60.40.1180 581 675 9.2E-16 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMS64_08440 95268580b880e5eb6df220dc046ce659 687 Pfam PF00128 Alpha amylase, catalytic domain 175 296 7.4E-14 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_08440 95268580b880e5eb6df220dc046ce659 687 SMART SM00642 155 558 1.5E-10 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_07650 ebc2e28621cddb0a8fe066cbfaca29af 396 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 7 392 1.3E-107 T 11-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 AMS64_07650 ebc2e28621cddb0a8fe066cbfaca29af 396 SUPERFAMILY SSF53383 5 393 3.9E-84 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_07650 ebc2e28621cddb0a8fe066cbfaca29af 396 Gene3D G3DSA:3.40.640.10 45 286 5.9E-116 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_07650 ebc2e28621cddb0a8fe066cbfaca29af 396 Gene3D G3DSA:3.90.1150.10 35 385 5.9E-116 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_07650 ebc2e28621cddb0a8fe066cbfaca29af 396 Pfam PF00155 Aminotransferase class I and II 33 388 1.1E-41 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 SUPERFAMILY SSF53784 3 320 2.88E-117 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 2.1E-86 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 97 113 2.1E-86 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 162 178 2.1E-86 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 180 197 2.1E-86 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 142 160 2.1E-86 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 243 265 2.1E-86 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 124 141 2.1E-86 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 216 228 2.1E-86 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 2.1E-86 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 Pfam PF00365 Phosphofructokinase 7 278 1.3E-109 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 PIRSF PIRSF000532 4 322 2.8E-127 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 7 303 1.3E-130 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 Gene3D G3DSA:3.40.50.460 146 255 4.9E-118 T 11-10-2018 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 ProSitePatterns PS00433 Phosphofructokinase signature. 247 265 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 Gene3D G3DSA:3.40.50.450 7 290 4.9E-118 T 11-10-2018 AMS64_08865 644f17f3f369f855814945b12c1f47f7 323 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 5 323 47.372 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AMS64_19180 516777dd050731437e746596ef5ce97d 447 PIRSF PIRSF005353 7 446 4.3E-172 T 11-10-2018 IPR026033 Purine permease PbuG-like AMS64_19180 516777dd050731437e746596ef5ce97d 447 Pfam PF00860 Permease family 33 406 7.6E-43 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AMS64_03275 105568d5645b3ee0c6dacdcaa7459dc7 307 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 281 45.776 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AMS64_03275 105568d5645b3ee0c6dacdcaa7459dc7 307 Gene3D G3DSA:3.30.1700.10 129 307 1.4E-66 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AMS64_03275 105568d5645b3ee0c6dacdcaa7459dc7 307 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 277 3.5E-108 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AMS64_03275 105568d5645b3ee0c6dacdcaa7459dc7 307 SUPERFAMILY SSF54211 134 279 2.73E-51 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_03275 105568d5645b3ee0c6dacdcaa7459dc7 307 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 293 2.4E-132 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AMS64_03275 105568d5645b3ee0c6dacdcaa7459dc7 307 Gene3D G3DSA:3.30.230.20 1 128 1.8E-51 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AMS64_03275 105568d5645b3ee0c6dacdcaa7459dc7 307 SUPERFAMILY SSF54211 3 125 2.81E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_12705 504cf3988027bb6315a4299708e4cff6 265 Pfam PF00005 ABC transporter 32 178 4.6E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_12705 504cf3988027bb6315a4299708e4cff6 265 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_12705 504cf3988027bb6315a4299708e4cff6 265 SMART SM00382 38 227 1.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_12705 504cf3988027bb6315a4299708e4cff6 265 Gene3D G3DSA:3.40.50.300 27 262 5.5E-55 T 11-10-2018 AMS64_12705 504cf3988027bb6315a4299708e4cff6 265 SUPERFAMILY SSF52540 29 235 1.01E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00385 2b99fdc0eba2e9ad906a47150ba12e47 137 Pfam PF00011 Hsp20/alpha crystallin family 44 136 3.7E-18 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AMS64_00385 2b99fdc0eba2e9ad906a47150ba12e47 137 Gene3D G3DSA:2.60.40.790 33 136 1.4E-20 T 11-10-2018 IPR008978 HSP20-like chaperone AMS64_00385 2b99fdc0eba2e9ad906a47150ba12e47 137 SUPERFAMILY SSF49764 31 136 1.01E-21 T 11-10-2018 IPR008978 HSP20-like chaperone AMS64_16280 43b68c15ba5dbc3800199a26388855d2 251 SUPERFAMILY SSF53850 19 239 2.61E-23 T 11-10-2018 AMS64_16280 43b68c15ba5dbc3800199a26388855d2 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 117 231 9.8E-8 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_16280 43b68c15ba5dbc3800199a26388855d2 251 Gene3D G3DSA:3.40.190.10 206 230 3.6E-9 T 11-10-2018 AMS64_16280 43b68c15ba5dbc3800199a26388855d2 251 Gene3D G3DSA:3.40.190.10 109 205 3.6E-9 T 11-10-2018 AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.951 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 Gene3D G3DSA:3.40.50.300 616 936 3.4E-140 T 11-10-2018 AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 Pfam PF00005 ABC transporter 623 860 1.6E-10 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 Gene3D G3DSA:3.40.50.300 5 596 1.1E-244 T 11-10-2018 AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 SUPERFAMILY SSF52540 613 913 3.97E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 Gene3D G3DSA:1.10.8.280 288 404 1.1E-244 T 11-10-2018 AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 Gene3D G3DSA:1.20.1580.10 692 830 3.4E-140 T 11-10-2018 AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 Gene3D G3DSA:1.20.1580.10 90 493 1.1E-244 T 11-10-2018 AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 SUPERFAMILY SSF52540 5 570 8.5E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 Gene3D G3DSA:3.30.190.20 130 239 1.1E-244 T 11-10-2018 AMS64_20925 3cd5803c4beb8cfab89a075de09ce8ed 942 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 Gene3D G3DSA:3.30.2090.10 707 800 9.4E-217 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 SUPERFAMILY SSF82866 795 1021 4.97E-36 T 11-10-2018 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 Pfam PF00873 AcrB/AcrD/AcrF family 11 1015 1.7E-133 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 Gene3D G3DSA:1.20.1640.10 13 499 9.4E-217 T 11-10-2018 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 Gene3D G3DSA:1.20.1640.10 500 1013 9.4E-217 T 11-10-2018 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 Gene3D G3DSA:3.30.70.1440 659 856 9.4E-217 T 11-10-2018 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 Gene3D G3DSA:3.30.70.1430 38 808 9.4E-217 T 11-10-2018 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 SUPERFAMILY SSF82714 706 779 1.83E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 Gene3D G3DSA:3.30.70.1430 556 658 9.4E-217 T 11-10-2018 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 SUPERFAMILY SSF82714 184 265 6.67E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 Gene3D G3DSA:3.30.70.1320 133 325 9.4E-217 T 11-10-2018 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 SUPERFAMILY SSF82693 141 324 1.31E-7 T 11-10-2018 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.1E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.1E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.1E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.1E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 3.1E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.1E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 Gene3D G3DSA:3.30.2090.10 179 272 9.4E-217 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 SUPERFAMILY SSF82693 40 128 4.88E-17 T 11-10-2018 AMS64_03400 43a6fa80fff5e6080e6d838d089740ec 1035 SUPERFAMILY SSF82866 301 489 3.01E-35 T 11-10-2018 AMS64_14825 97cba2112f208490855fddea18f8ffe2 624 Pfam PF01483 Proprotein convertase P-domain 496 586 7.5E-16 T 11-10-2018 IPR002884 P domain GO:0004252|GO:0006508 AMS64_14825 97cba2112f208490855fddea18f8ffe2 624 SUPERFAMILY SSF49785 468 621 2.0E-22 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AMS64_14825 97cba2112f208490855fddea18f8ffe2 624 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 98 109 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMS64_14825 97cba2112f208490855fddea18f8ffe2 624 Pfam PF00082 Subtilase family 93 399 1.4E-30 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMS64_14825 97cba2112f208490855fddea18f8ffe2 624 Gene3D G3DSA:2.60.120.260 456 624 6.5E-66 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AMS64_14825 97cba2112f208490855fddea18f8ffe2 624 SUPERFAMILY SSF52743 52 451 1.7E-59 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMS64_14825 97cba2112f208490855fddea18f8ffe2 624 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 358 368 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMS64_14825 97cba2112f208490855fddea18f8ffe2 624 PRINTS PR00723 Subtilisin serine protease family (S8) signature 93 112 1.6E-15 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AMS64_14825 97cba2112f208490855fddea18f8ffe2 624 PRINTS PR00723 Subtilisin serine protease family (S8) signature 135 148 1.6E-15 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AMS64_14825 97cba2112f208490855fddea18f8ffe2 624 PRINTS PR00723 Subtilisin serine protease family (S8) signature 357 373 1.6E-15 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AMS64_14825 97cba2112f208490855fddea18f8ffe2 624 Gene3D G3DSA:3.40.50.200 45 455 2.8E-129 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMS64_14825 97cba2112f208490855fddea18f8ffe2 624 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 139 149 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMS64_00275 0f1cb30514079e5dac52692a14db7930 219 SUPERFAMILY SSF51161 44 216 4.99E-45 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_00275 0f1cb30514079e5dac52692a14db7930 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMS64_00275 0f1cb30514079e5dac52692a14db7930 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 154 1.3E-9 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_00275 0f1cb30514079e5dac52692a14db7930 219 Gene3D G3DSA:2.160.10.10 1 219 9.4E-67 T 11-10-2018 AMS64_13520 469eab2b18725602c4965aa1beabee54 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_13520 469eab2b18725602c4965aa1beabee54 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 3.3E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_13520 469eab2b18725602c4965aa1beabee54 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 3.3E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_13520 469eab2b18725602c4965aa1beabee54 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 3.3E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_13520 469eab2b18725602c4965aa1beabee54 212 SMART SM00421 150 207 1.4E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_13520 469eab2b18725602c4965aa1beabee54 212 Pfam PF00072 Response regulator receiver domain 8 119 4.9E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_13520 469eab2b18725602c4965aa1beabee54 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 1.9E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_13520 469eab2b18725602c4965aa1beabee54 212 SUPERFAMILY SSF46894 141 209 8.16E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_13520 469eab2b18725602c4965aa1beabee54 212 SUPERFAMILY SSF52172 4 135 1.05E-33 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_13520 469eab2b18725602c4965aa1beabee54 212 Gene3D G3DSA:3.40.50.12740 7 211 2.5E-61 T 11-10-2018 AMS64_13520 469eab2b18725602c4965aa1beabee54 212 SMART SM00448 6 119 3.1E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_18900 fa943063068cdc7f1c1838fb470152d2 156 SUPERFAMILY SSF52121 3 154 3.01E-60 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_18900 fa943063068cdc7f1c1838fb470152d2 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 4.0E-56 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_18900 fa943063068cdc7f1c1838fb470152d2 156 Gene3D G3DSA:3.40.50.960 1 156 1.8E-63 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_18900 fa943063068cdc7f1c1838fb470152d2 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.927 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_18900 fa943063068cdc7f1c1838fb470152d2 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.8E-55 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 Pfam PF00672 HAMP domain 163 212 2.7E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 SUPERFAMILY SSF47384 200 277 2.16E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 Gene3D G3DSA:1.10.287.130 212 278 7.3E-15 T 11-10-2018 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 SUPERFAMILY SSF55874 269 430 4.71E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 Gene3D G3DSA:3.30.565.10 286 430 9.4E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 Gene3D G3DSA:1.10.8.500 164 211 1.1E-16 T 11-10-2018 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 SMART SM00388 217 279 8.7E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 SMART SM00304 163 216 3.2E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 SUPERFAMILY SSF158472 163 215 1.57E-12 T 11-10-2018 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 1.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 1.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 1.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 1.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 429 2.9E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 218 277 3.1E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_01265 4a85f1215ad9818b6b49e2bf0ab58553 431 SMART SM00387 322 430 1.2E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_22580 5de7c61d9d550351626f716ac839fad2 321 Pfam PF01553 Acyltransferase 76 214 5.5E-14 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMS64_22580 5de7c61d9d550351626f716ac839fad2 321 SMART SM00563 89 231 2.5E-21 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMS64_22580 5de7c61d9d550351626f716ac839fad2 321 SUPERFAMILY SSF69593 21 288 1.96E-30 T 11-10-2018 AMS64_05365 3b3625e65d48e7f2cb20599104b51a58 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMS64_05365 3b3625e65d48e7f2cb20599104b51a58 355 SUPERFAMILY SSF51726 3 353 9.24E-126 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMS64_05365 3b3625e65d48e7f2cb20599104b51a58 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 1.7E-138 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMS64_05365 3b3625e65d48e7f2cb20599104b51a58 355 Gene3D G3DSA:3.20.20.210 1 354 1.3E-164 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMS64_05365 3b3625e65d48e7f2cb20599104b51a58 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 2.4E-143 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMS64_05365 3b3625e65d48e7f2cb20599104b51a58 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.565 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMS64_05365 3b3625e65d48e7f2cb20599104b51a58 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMS64_08285 d64431bd9c7f9efb5dada0722eb1c301 468 Gene3D G3DSA:3.50.50.60 30 395 2.6E-65 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_08285 d64431bd9c7f9efb5dada0722eb1c301 468 Pfam PF01266 FAD dependent oxidoreductase 30 393 5.7E-52 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMS64_08285 d64431bd9c7f9efb5dada0722eb1c301 468 SUPERFAMILY SSF51905 29 410 4.92E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_08285 d64431bd9c7f9efb5dada0722eb1c301 468 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 468 5.0E-249 T 11-10-2018 IPR017715 Putative aminophosphonate oxidoreductase AMS64_08285 d64431bd9c7f9efb5dada0722eb1c301 468 Gene3D G3DSA:3.30.9.10 124 354 2.6E-65 T 11-10-2018 AMS64_20125 cdc7369984926a6169b87ebad64572e4 169 PIRSF PIRSF006160 1 162 6.5E-64 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMS64_20125 cdc7369984926a6169b87ebad64572e4 169 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 5.9E-60 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMS64_20125 cdc7369984926a6169b87ebad64572e4 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.6E-49 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMS64_20125 cdc7369984926a6169b87ebad64572e4 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.6E-49 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMS64_20125 cdc7369984926a6169b87ebad64572e4 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.6E-49 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMS64_20125 cdc7369984926a6169b87ebad64572e4 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.6E-49 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMS64_20125 cdc7369984926a6169b87ebad64572e4 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.6E-49 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMS64_20125 cdc7369984926a6169b87ebad64572e4 169 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 2.0E-68 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMS64_20125 cdc7369984926a6169b87ebad64572e4 169 SUPERFAMILY SSF63411 4 162 1.37E-64 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMS64_20125 cdc7369984926a6169b87ebad64572e4 169 Gene3D G3DSA:3.30.1360.80 1 169 8.1E-70 T 11-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMS64_20125 cdc7369984926a6169b87ebad64572e4 169 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.607 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 Gene3D G3DSA:3.30.420.10 319 533 3.2E-72 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 Pfam PF01612 3'-5' exonuclease 322 509 2.0E-39 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 805 816 1.0E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 670 685 1.0E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 647 669 1.0E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 868 881 1.0E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 692 715 1.0E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 722 735 1.0E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 746 771 1.0E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 783 794 1.0E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 837 853 1.0E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 Gene3D G3DSA:1.20.1060.10 536 650 3.7E-41 T 11-10-2018 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 ProSitePatterns PS00447 DNA polymerase family A signature. 746 765 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 Gene3D G3DSA:3.30.70.370 656 917 6.9E-114 T 11-10-2018 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 Gene3D G3DSA:1.10.150.20 701 844 6.9E-114 T 11-10-2018 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 TIGRFAM TIGR00593 pola: DNA polymerase I 7 921 6.4E-285 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 Gene3D G3DSA:3.40.50.1010 7 283 9.6E-91 T 11-10-2018 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 SUPERFAMILY SSF88723 5 170 1.35E-53 T 11-10-2018 IPR029060 PIN-like domain superfamily AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 1.5E-28 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 Pfam PF00476 DNA polymerase family A 544 918 2.0E-156 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 SUPERFAMILY SSF53098 325 509 2.02E-59 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 SUPERFAMILY SSF47807 171 292 3.44E-29 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 SMART SM00475 5 268 7.6E-117 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 SMART SM00474 322 509 1.2E-40 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 SUPERFAMILY SSF56672 514 921 1.89E-158 T 11-10-2018 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 Gene3D G3DSA:1.10.150.20 174 253 9.6E-91 T 11-10-2018 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 SMART SM00482 678 885 4.8E-121 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 SMART SM00279 173 208 1.9E-11 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AMS64_01300 c97cfd9810730ea5dd0150e54fb484ba 921 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 170 5.2E-52 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 SUPERFAMILY SSF51569 2 288 2.3E-101 T 11-10-2018 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 Gene3D G3DSA:3.20.20.70 1 290 4.3E-114 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 SMART SM01130 1 288 9.1E-140 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 5.2E-29 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 5.2E-29 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 5.2E-29 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 5.2E-29 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 7.0E-88 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 286 9.5E-94 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 PIRSF PIRSF001365 1 290 2.1E-92 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 286 62.225 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_20745 51b7246683778e99da5cc51aadc63852 290 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AMS64_00010 2ed4a4e29e6eea0645366fd88c7fa0ab 129 SMART SM00422 1 70 7.0E-32 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_00010 2ed4a4e29e6eea0645366fd88c7fa0ab 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 8.6E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_00010 2ed4a4e29e6eea0645366fd88c7fa0ab 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 8.6E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_00010 2ed4a4e29e6eea0645366fd88c7fa0ab 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 8.6E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_00010 2ed4a4e29e6eea0645366fd88c7fa0ab 129 Pfam PF00376 MerR family regulatory protein 2 39 1.4E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_00010 2ed4a4e29e6eea0645366fd88c7fa0ab 129 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.7E-51 T 11-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AMS64_00010 2ed4a4e29e6eea0645366fd88c7fa0ab 129 Pfam PF09278 MerR, DNA binding 44 108 6.0E-18 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AMS64_00010 2ed4a4e29e6eea0645366fd88c7fa0ab 129 SUPERFAMILY SSF46955 1 126 4.03E-38 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMS64_00010 2ed4a4e29e6eea0645366fd88c7fa0ab 129 Gene3D G3DSA:1.10.1660.10 1 125 7.3E-36 T 11-10-2018 AMS64_00010 2ed4a4e29e6eea0645366fd88c7fa0ab 129 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 Pfam PF00072 Response regulator receiver domain 34 129 4.4E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 Gene3D G3DSA:1.10.10.60 384 455 5.9E-9 T 11-10-2018 AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 Gene3D G3DSA:3.40.50.2300 30 135 1.3E-11 T 11-10-2018 AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 SUPERFAMILY SSF52172 21 186 2.13E-19 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 SUPERFAMILY SSF52540 141 375 1.94E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 Pfam PF00158 Sigma-54 interaction domain 142 307 1.3E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 SMART SM00382 161 304 2.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 Pfam PF02954 Bacterial regulatory protein, Fis family 409 444 4.8E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 Gene3D G3DSA:3.40.50.300 136 311 4.2E-61 T 11-10-2018 AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 SUPERFAMILY SSF46689 351 444 5.82E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 Gene3D G3DSA:1.10.8.60 312 383 4.0E-22 T 11-10-2018 AMS64_03035 00d3e38e8471828e0eaae3a098d69481 461 SMART SM00448 21 128 2.5E-6 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_20200 a4afa46b2af905991f36aa89b3d68708 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.249 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMS64_20200 a4afa46b2af905991f36aa89b3d68708 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 510 6.0E-132 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMS64_20200 a4afa46b2af905991f36aa89b3d68708 520 PRINTS PR01806 Virulence factor MviN signature 142 166 4.8E-73 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMS64_20200 a4afa46b2af905991f36aa89b3d68708 520 PRINTS PR01806 Virulence factor MviN signature 418 435 4.8E-73 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMS64_20200 a4afa46b2af905991f36aa89b3d68708 520 PRINTS PR01806 Virulence factor MviN signature 366 385 4.8E-73 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMS64_20200 a4afa46b2af905991f36aa89b3d68708 520 PRINTS PR01806 Virulence factor MviN signature 54 70 4.8E-73 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMS64_20200 a4afa46b2af905991f36aa89b3d68708 520 PRINTS PR01806 Virulence factor MviN signature 268 294 4.8E-73 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMS64_20200 a4afa46b2af905991f36aa89b3d68708 520 PRINTS PR01806 Virulence factor MviN signature 35 54 4.8E-73 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMS64_20200 a4afa46b2af905991f36aa89b3d68708 520 PRINTS PR01806 Virulence factor MviN signature 166 187 4.8E-73 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMS64_20200 a4afa46b2af905991f36aa89b3d68708 520 PIRSF PIRSF002869 1 518 1.2E-150 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMS64_20200 a4afa46b2af905991f36aa89b3d68708 520 Pfam PF03023 MviN-like protein 30 482 1.7E-140 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 Pfam PF00710 Asparaginase, N-terminal 5 187 2.0E-66 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 Gene3D G3DSA:3.40.50.40 208 335 2.0E-44 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 SUPERFAMILY SSF53774 2 334 1.06E-110 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 2 334 7.8E-116 T 11-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 Gene3D G3DSA:3.40.50.1170 1 207 4.2E-87 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 83 93 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 SMART SM00870 4 322 4.5E-140 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 PIRSF PIRSF500176 1 331 2.1E-109 T 11-10-2018 AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 PIRSF PIRSF001220 1 333 1.0E-93 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 PRINTS PR00139 Asparaginase/glutaminase family signature 259 277 1.1E-15 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 1.1E-15 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMS64_06110 1be9c3fc3ba418c621eef0ac91cb8849 335 PRINTS PR00139 Asparaginase/glutaminase family signature 82 100 1.1E-15 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMS64_16070 9aab785b4180ce9cc9b24d45e35e0d53 169 Gene3D G3DSA:1.10.1220.10 1 40 3.0E-23 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AMS64_16070 9aab785b4180ce9cc9b24d45e35e0d53 169 Pfam PF17206 SeqA protein N-terminal domain 1 34 4.7E-21 T 11-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal AMS64_16070 9aab785b4180ce9cc9b24d45e35e0d53 169 PIRSF PIRSF019401 1 59 7.3E-17 T 11-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AMS64_16070 9aab785b4180ce9cc9b24d45e35e0d53 169 PIRSF PIRSF019401 37 169 7.3E-36 T 11-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AMS64_16070 9aab785b4180ce9cc9b24d45e35e0d53 169 Gene3D G3DSA:1.20.1380.10 56 169 5.1E-45 T 11-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 AMS64_16070 9aab785b4180ce9cc9b24d45e35e0d53 169 SUPERFAMILY SSF82808 58 169 6.67E-40 T 11-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 AMS64_16070 9aab785b4180ce9cc9b24d45e35e0d53 169 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 169 42.421 T 11-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AMS64_16070 9aab785b4180ce9cc9b24d45e35e0d53 169 Pfam PF03925 SeqA protein C-terminal domain 60 167 7.3E-41 T 11-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AMS64_16070 9aab785b4180ce9cc9b24d45e35e0d53 169 SUPERFAMILY SSF47598 1 34 2.67E-13 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMS64_13500 d4bb619c44f81317ccd71dd0304cc63e 84 Pfam PF03927 NapD protein 6 80 7.4E-28 T 11-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly AMS64_13500 d4bb619c44f81317ccd71dd0304cc63e 84 Gene3D G3DSA:3.30.70.920 5 74 1.5E-20 T 11-10-2018 AMS64_13500 d4bb619c44f81317ccd71dd0304cc63e 84 Hamap MF_02200 Chaperone NapD [napD]. 5 81 19.016 T 11-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly AMS64_15275 41e1bf9691d168cd6abe26b779214c6a 433 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 24 43 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_15275 41e1bf9691d168cd6abe26b779214c6a 433 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 15 421 51.886 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_15275 41e1bf9691d168cd6abe26b779214c6a 433 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 209 219 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_15275 41e1bf9691d168cd6abe26b779214c6a 433 Gene3D G3DSA:2.160.10.10 299 429 6.8E-37 T 11-10-2018 AMS64_15275 41e1bf9691d168cd6abe26b779214c6a 433 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 19 395 6.8E-156 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_15275 41e1bf9691d168cd6abe26b779214c6a 433 SUPERFAMILY SSF51161 310 409 1.94E-16 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_15275 41e1bf9691d168cd6abe26b779214c6a 433 Pfam PF00483 Nucleotidyl transferase 20 289 1.8E-68 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMS64_15275 41e1bf9691d168cd6abe26b779214c6a 433 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 111 119 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMS64_15275 41e1bf9691d168cd6abe26b779214c6a 433 SUPERFAMILY SSF53448 18 375 6.08E-78 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_15275 41e1bf9691d168cd6abe26b779214c6a 433 Gene3D G3DSA:3.90.550.10 4 298 2.0E-91 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_11920 72ed0f6186cac55232b566fab338f662 224 SUPERFAMILY SSF46894 118 217 3.12E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_11920 72ed0f6186cac55232b566fab338f662 224 Gene3D G3DSA:1.10.10.10 123 223 1.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_11920 72ed0f6186cac55232b566fab338f662 224 SMART SM00448 1 112 5.5E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_11920 72ed0f6186cac55232b566fab338f662 224 Pfam PF00072 Response regulator receiver domain 4 112 1.0E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_11920 72ed0f6186cac55232b566fab338f662 224 SUPERFAMILY SSF52172 1 120 4.13E-36 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_11920 72ed0f6186cac55232b566fab338f662 224 SMART SM00862 143 216 4.2E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_11920 72ed0f6186cac55232b566fab338f662 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.6E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_11920 72ed0f6186cac55232b566fab338f662 224 Gene3D G3DSA:3.40.50.2300 1 122 1.2E-36 T 11-10-2018 AMS64_07415 d82443b0889dc25f5cef114dadd7fe1b 290 PIRSF PIRSF020479 18 289 7.0E-74 T 11-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like AMS64_07415 d82443b0889dc25f5cef114dadd7fe1b 290 Gene3D G3DSA:2.40.50.180 170 235 1.7E-5 T 11-10-2018 AMS64_07415 d82443b0889dc25f5cef114dadd7fe1b 290 SMART SM00260 147 278 2.4E-5 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_07415 d82443b0889dc25f5cef114dadd7fe1b 290 Pfam PF01584 CheW-like domain 151 278 1.1E-14 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_07415 d82443b0889dc25f5cef114dadd7fe1b 290 SUPERFAMILY SSF50341 147 278 2.88E-16 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMS64_07415 d82443b0889dc25f5cef114dadd7fe1b 290 Gene3D G3DSA:2.30.30.40 154 265 1.7E-5 T 11-10-2018 AMS64_09260 5d570e8a19d9f63694531f2650ad2370 383 Gene3D G3DSA:2.40.240.50 142 280 5.5E-134 T 11-10-2018 AMS64_09260 5d570e8a19d9f63694531f2650ad2370 383 SMART SM00925 142 275 3.8E-69 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AMS64_09260 5d570e8a19d9f63694531f2650ad2370 383 Pfam PF06725 3D domain 295 371 2.6E-19 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AMS64_09260 5d570e8a19d9f63694531f2650ad2370 383 Pfam PF03562 MltA specific insert domain 132 162 5.3E-7 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AMS64_09260 5d570e8a19d9f63694531f2650ad2370 383 Pfam PF03562 MltA specific insert domain 168 275 1.4E-33 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AMS64_09260 5d570e8a19d9f63694531f2650ad2370 383 Gene3D G3DSA:2.40.40.10 74 371 5.5E-134 T 11-10-2018 IPR036908 RlpA-like domain superfamily AMS64_09260 5d570e8a19d9f63694531f2650ad2370 383 SUPERFAMILY SSF50685 50 372 2.09E-103 T 11-10-2018 IPR036908 RlpA-like domain superfamily AMS64_09260 5d570e8a19d9f63694531f2650ad2370 383 PIRSF PIRSF019422 1 163 1.8E-10 T 11-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A AMS64_09260 5d570e8a19d9f63694531f2650ad2370 383 PIRSF PIRSF019422 165 380 1.3E-65 T 11-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A AMS64_11615 c18c642cbbb4d57c2cabb9112750b35c 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.053 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMS64_11615 c18c642cbbb4d57c2cabb9112750b35c 142 Gene3D G3DSA:3.30.70.141 1 142 1.8E-58 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMS64_11615 c18c642cbbb4d57c2cabb9112750b35c 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.5E-56 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMS64_11615 c18c642cbbb4d57c2cabb9112750b35c 142 SUPERFAMILY SSF54919 1 140 3.4E-59 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMS64_11615 c18c642cbbb4d57c2cabb9112750b35c 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_11615 c18c642cbbb4d57c2cabb9112750b35c 142 SMART SM00562 3 140 2.0E-88 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMS64_11615 c18c642cbbb4d57c2cabb9112750b35c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 6.6E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMS64_11615 c18c642cbbb4d57c2cabb9112750b35c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 6.6E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMS64_11615 c18c642cbbb4d57c2cabb9112750b35c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 6.6E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMS64_11615 c18c642cbbb4d57c2cabb9112750b35c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 6.6E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMS64_11615 c18c642cbbb4d57c2cabb9112750b35c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 6.6E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMS64_05890 f32459e872dc7f78a0859ff3456cf5ba 384 PIRSF PIRSF004925 1 383 1.0E-103 T 11-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter AMS64_05890 f32459e872dc7f78a0859ff3456cf5ba 384 SUPERFAMILY SSF103473 4 371 4.58E-32 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_05890 f32459e872dc7f78a0859ff3456cf5ba 384 Gene3D G3DSA:1.20.1250.20 1 190 1.5E-15 T 11-10-2018 AMS64_05890 f32459e872dc7f78a0859ff3456cf5ba 384 Pfam PF12832 MFS_1 like family 10 357 1.8E-42 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain AMS64_05890 f32459e872dc7f78a0859ff3456cf5ba 384 Gene3D G3DSA:1.20.1250.20 191 375 1.8E-31 T 11-10-2018 AMS64_11525 cc9a62c1bb89f58718ae1895d78f83b1 269 PIRSF PIRSF001430 1 252 2.5E-78 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_11525 cc9a62c1bb89f58718ae1895d78f83b1 269 Pfam PF01416 tRNA pseudouridine synthase 8 102 1.4E-9 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_11525 cc9a62c1bb89f58718ae1895d78f83b1 269 Pfam PF01416 tRNA pseudouridine synthase 144 244 3.5E-29 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_11525 cc9a62c1bb89f58718ae1895d78f83b1 269 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 1.1E-75 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_11525 cc9a62c1bb89f58718ae1895d78f83b1 269 Gene3D G3DSA:3.30.70.580 1 104 6.8E-41 T 11-10-2018 AMS64_11525 cc9a62c1bb89f58718ae1895d78f83b1 269 SUPERFAMILY SSF55120 1 256 1.4E-92 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_11525 cc9a62c1bb89f58718ae1895d78f83b1 269 Gene3D G3DSA:3.30.70.660 105 242 2.5E-48 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 AMS64_11525 cc9a62c1bb89f58718ae1895d78f83b1 269 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 35.289 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_03730 42c464ae041e60a5486be32056e949fa 412 Gene3D G3DSA:1.10.3210.10 16 325 2.5E-52 T 11-10-2018 AMS64_03730 42c464ae041e60a5486be32056e949fa 412 SUPERFAMILY SSF109604 164 324 1.01E-25 T 11-10-2018 AMS64_03730 42c464ae041e60a5486be32056e949fa 412 Pfam PF13487 HD domain 219 276 1.2E-11 T 11-10-2018 AMS64_03730 42c464ae041e60a5486be32056e949fa 412 Pfam PF11871 Domain of unknown function (DUF3391) 4 135 2.3E-32 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 AMS64_04915 7b0b733bd46d03d9c4479972f0b3baaf 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 9.3E-59 T 11-10-2018 IPR016040 NAD(P)-binding domain AMS64_04915 7b0b733bd46d03d9c4479972f0b3baaf 337 SUPERFAMILY SSF51735 1 336 7.12E-98 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_04915 7b0b733bd46d03d9c4479972f0b3baaf 337 Gene3D G3DSA:3.90.25.10 193 328 8.7E-142 T 11-10-2018 AMS64_04915 7b0b733bd46d03d9c4479972f0b3baaf 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 334 1.1E-141 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AMS64_04915 7b0b733bd46d03d9c4479972f0b3baaf 337 Gene3D G3DSA:3.40.50.720 3 273 8.7E-142 T 11-10-2018 AMS64_11915 f525190d342dc39af2869b8c64f89bdc 467 SUPERFAMILY SSF47384 225 307 2.16E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_11915 f525190d342dc39af2869b8c64f89bdc 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 464 3.3E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_11915 f525190d342dc39af2869b8c64f89bdc 467 SMART SM00387 355 466 9.8E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_11915 f525190d342dc39af2869b8c64f89bdc 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 6.1E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_11915 f525190d342dc39af2869b8c64f89bdc 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 420 6.1E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_11915 f525190d342dc39af2869b8c64f89bdc 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 6.1E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_11915 f525190d342dc39af2869b8c64f89bdc 467 Gene3D G3DSA:1.10.287.130 193 308 2.7E-17 T 11-10-2018 AMS64_11915 f525190d342dc39af2869b8c64f89bdc 467 Gene3D G3DSA:3.30.565.10 314 466 2.4E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_11915 f525190d342dc39af2869b8c64f89bdc 467 SMART SM00388 242 307 2.9E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_11915 f525190d342dc39af2869b8c64f89bdc 467 SUPERFAMILY SSF55874 311 464 2.88E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_11915 f525190d342dc39af2869b8c64f89bdc 467 Pfam PF08521 Two-component sensor kinase N-terminal 17 165 1.2E-38 T 11-10-2018 IPR013727 Two-component sensor kinase, N-terminal AMS64_11915 f525190d342dc39af2869b8c64f89bdc 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 305 1.4E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_21190 d865e6262e69c8603eddd9370049ef60 414 SMART SM00388 212 278 1.3E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_21190 d865e6262e69c8603eddd9370049ef60 414 SUPERFAMILY SSF47384 200 276 7.65E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_21190 d865e6262e69c8603eddd9370049ef60 414 Gene3D G3DSA:3.30.565.10 276 345 1.2E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_21190 d865e6262e69c8603eddd9370049ef60 414 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 277 1.9E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_21190 d865e6262e69c8603eddd9370049ef60 414 Gene3D G3DSA:1.10.287.130 220 275 1.2E-12 T 11-10-2018 AMS64_21190 d865e6262e69c8603eddd9370049ef60 414 SUPERFAMILY SSF55874 285 389 4.07E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_11015 586b0f0d2ea950945812057aea1556a8 351 PIRSF PIRSF001361 1 351 5.4E-163 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMS64_11015 586b0f0d2ea950945812057aea1556a8 351 Pfam PF00793 DAHP synthetase I family 41 337 1.6E-106 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMS64_11015 586b0f0d2ea950945812057aea1556a8 351 Gene3D G3DSA:3.20.20.70 1 350 1.1E-166 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_11015 586b0f0d2ea950945812057aea1556a8 351 SUPERFAMILY SSF51569 7 347 3.14E-140 T 11-10-2018 AMS64_11015 586b0f0d2ea950945812057aea1556a8 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 6.8E-170 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMS64_11530 f2221a1043a232f8c47334c8d2cc624e 734 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 87 160 2.1E-24 T 11-10-2018 IPR020012 Motility protein FimV, N-terminal AMS64_11530 f2221a1043a232f8c47334c8d2cc624e 734 Gene3D G3DSA:1.20.58.2200 672 733 1.3E-18 T 11-10-2018 IPR038440 FimV, C-terminal domain superfamily AMS64_11530 f2221a1043a232f8c47334c8d2cc624e 734 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 690 733 8.6E-18 T 11-10-2018 IPR020011 Motility protein FimV, C-terminal AMS64_05410 8565320c933f75aa512afb331a80de2a 599 SUPERFAMILY SSF74863 43 155 1.96E-35 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AMS64_05410 8565320c933f75aa512afb331a80de2a 599 ProSitePatterns PS00194 Thioredoxin family active site. 504 522 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMS64_05410 8565320c933f75aa512afb331a80de2a 599 Pfam PF13899 Thioredoxin-like 493 568 8.7E-13 T 11-10-2018 AMS64_05410 8565320c933f75aa512afb331a80de2a 599 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 7 596 36.032 T 11-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AMS64_05410 8565320c933f75aa512afb331a80de2a 599 Gene3D G3DSA:2.60.40.1250 37 172 2.4E-39 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AMS64_05410 8565320c933f75aa512afb331a80de2a 599 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 200 404 3.4E-16 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AMS64_05410 8565320c933f75aa512afb331a80de2a 599 SUPERFAMILY SSF52833 476 588 6.42E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_05410 8565320c933f75aa512afb331a80de2a 599 Gene3D G3DSA:3.40.30.10 471 599 4.3E-34 T 11-10-2018 AMS64_05410 8565320c933f75aa512afb331a80de2a 599 Pfam PF11412 Disulphide bond corrector protein DsbC 45 155 3.5E-30 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AMS64_20320 f68e0bfd6d002cb08b362c8484f26227 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 3 106 1.4E-16 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMS64_20320 f68e0bfd6d002cb08b362c8484f26227 216 Gene3D G3DSA:1.10.3720.10 1 214 3.0E-46 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_20320 f68e0bfd6d002cb08b362c8484f26227 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 201 1.4E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_20320 f68e0bfd6d002cb08b362c8484f26227 216 SUPERFAMILY SSF161098 4 197 2.22E-38 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_15705 cbb4f29b1a6af8cbcbef05c57724ed54 328 SUPERFAMILY SSF56349 60 315 1.29E-41 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_15705 cbb4f29b1a6af8cbcbef05c57724ed54 328 Pfam PF00589 Phage integrase family 163 307 5.6E-20 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_15705 cbb4f29b1a6af8cbcbef05c57724ed54 328 Gene3D G3DSA:1.10.443.10 162 324 1.4E-41 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_20815 612ad6d4ea295cf6ff4099d2cf15a91c 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AMS64_20815 612ad6d4ea295cf6ff4099d2cf15a91c 116 Gene3D G3DSA:2.60.300.12 10 116 8.5E-36 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMS64_20815 612ad6d4ea295cf6ff4099d2cf15a91c 116 SUPERFAMILY SSF89360 10 105 6.54E-32 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMS64_20815 612ad6d4ea295cf6ff4099d2cf15a91c 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 11 115 3.2E-40 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AMS64_20815 612ad6d4ea295cf6ff4099d2cf15a91c 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 36.974 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AMS64_20815 612ad6d4ea295cf6ff4099d2cf15a91c 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 11 111 3.0E-22 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AMS64_09325 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 Gene3D G3DSA:1.10.1900.20 56 118 2.7E-29 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09325 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 Pfam PF00453 Ribosomal protein L20 3 109 3.0E-49 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09325 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09325 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09325 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09325 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 7.5E-52 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09325 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09325 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 SUPERFAMILY SSF74731 2 117 2.09E-50 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09325 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 Gene3D G3DSA:1.10.720.90 2 55 1.9E-24 T 11-10-2018 AMS64_09325 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.654 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09325 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-14 T 11-10-2018 AMS64_20225 a4dfb23ca5e0252756186fbd9f28f0fb 396 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 379 5.4E-170 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMS64_20225 a4dfb23ca5e0252756186fbd9f28f0fb 396 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 386 23.432 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMS64_20225 a4dfb23ca5e0252756186fbd9f28f0fb 396 Pfam PF06965 Na+/H+ antiporter 1 7 380 3.0E-148 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMS64_20225 a4dfb23ca5e0252756186fbd9f28f0fb 396 Gene3D G3DSA:1.20.1530.10 3 387 2.6E-150 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily AMS64_19635 af68947b7a6dba8dabb14c37b5263184 321 Gene3D G3DSA:3.20.20.70 6 248 1.5E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_19635 af68947b7a6dba8dabb14c37b5263184 321 SUPERFAMILY SSF51395 11 318 4.76E-89 T 11-10-2018 AMS64_19635 af68947b7a6dba8dabb14c37b5263184 321 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 3.2E-105 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMS64_19635 af68947b7a6dba8dabb14c37b5263184 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMS64_19635 af68947b7a6dba8dabb14c37b5263184 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.279 T 11-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AMS64_19635 af68947b7a6dba8dabb14c37b5263184 321 PIRSF PIRSF006621 1 320 2.4E-103 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMS64_19635 af68947b7a6dba8dabb14c37b5263184 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 317 1.7E-125 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AMS64_14510 cf941bebbacd2f2d433227be449c3d13 180 Gene3D G3DSA:1.10.10.1590 27 97 5.4E-16 T 11-10-2018 AMS64_14510 cf941bebbacd2f2d433227be449c3d13 180 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 36 179 5.0E-47 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14510 cf941bebbacd2f2d433227be449c3d13 180 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 137 155 - T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14510 cf941bebbacd2f2d433227be449c3d13 180 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 38 179 4.0E-48 T 11-10-2018 AMS64_14510 cf941bebbacd2f2d433227be449c3d13 180 SUPERFAMILY SSF52833 29 179 2.35E-47 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_14510 cf941bebbacd2f2d433227be449c3d13 180 PIRSF PIRSF000216 9 180 3.9E-50 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14510 cf941bebbacd2f2d433227be449c3d13 180 Gene3D G3DSA:3.40.30.10 98 180 1.3E-21 T 11-10-2018 AMS64_16010 c1aedc8322058a34ccea02499b273e3c 591 Gene3D G3DSA:3.10.20.310 41 118 5.4E-13 T 11-10-2018 AMS64_16010 c1aedc8322058a34ccea02499b273e3c 591 Pfam PF17243 POTRA domain TamA domain 1 46 116 1.4E-15 T 11-10-2018 IPR035243 TamA, POTRA domain 1 AMS64_16010 c1aedc8322058a34ccea02499b273e3c 591 Pfam PF07244 Surface antigen variable number repeat 141 194 1.7E-4 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMS64_16010 c1aedc8322058a34ccea02499b273e3c 591 Gene3D G3DSA:2.40.160.50 282 591 6.7E-99 T 11-10-2018 AMS64_16010 c1aedc8322058a34ccea02499b273e3c 591 Gene3D G3DSA:3.10.20.310 119 206 2.0E-24 T 11-10-2018 AMS64_16010 c1aedc8322058a34ccea02499b273e3c 591 Gene3D G3DSA:3.10.20.310 207 281 3.0E-12 T 11-10-2018 AMS64_16010 c1aedc8322058a34ccea02499b273e3c 591 Pfam PF01103 Surface antigen 302 588 4.0E-28 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 638 8.5E-126 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.2E-54 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 2.2E-54 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 2.2E-54 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 2.2E-54 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 2.2E-54 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 2.2E-54 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.2E-54 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 3.8E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 3.8E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 3.8E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 3.8E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.8E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 3.8E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 3.8E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 3.8E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 Pfam PF01578 Cytochrome C assembly protein 89 296 9.4E-54 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMS64_07455 432fdb06f4441312c9b5892bf69f4da4 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 2.6E-256 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_13450 61a4bf432203a6b18022eee1cbf27169 242 Gene3D G3DSA:3.40.190.10 31 238 2.4E-60 T 11-10-2018 AMS64_13450 61a4bf432203a6b18022eee1cbf27169 242 SUPERFAMILY SSF53850 25 240 7.67E-44 T 11-10-2018 AMS64_13450 61a4bf432203a6b18022eee1cbf27169 242 Gene3D G3DSA:3.40.190.10 104 204 2.4E-60 T 11-10-2018 AMS64_13450 61a4bf432203a6b18022eee1cbf27169 242 Pfam PF13531 Bacterial extracellular solute-binding protein 28 238 2.3E-29 T 11-10-2018 AMS64_13450 61a4bf432203a6b18022eee1cbf27169 242 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 32 231 4.3E-44 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AMS64_13450 61a4bf432203a6b18022eee1cbf27169 242 PIRSF PIRSF004846 1 242 1.4E-34 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AMS64_10120 a935a8a8dfc598584c80c9645e4c2be8 347 SMART SM00327 97 286 2.5E-20 T 11-10-2018 IPR002035 von Willebrand factor, type A AMS64_10120 a935a8a8dfc598584c80c9645e4c2be8 347 Pfam PF00092 von Willebrand factor type A domain 99 289 8.4E-24 T 11-10-2018 IPR002035 von Willebrand factor, type A AMS64_10120 a935a8a8dfc598584c80c9645e4c2be8 347 SUPERFAMILY SSF53300 95 293 5.19E-34 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_10120 a935a8a8dfc598584c80c9645e4c2be8 347 Gene3D G3DSA:3.40.50.410 97 298 4.6E-50 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_22545 651703403abf3e595fe6b244b6e3cefc 296 SUPERFAMILY SSF52540 54 282 7.38E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_22545 651703403abf3e595fe6b244b6e3cefc 296 Pfam PF05621 Bacterial TniB protein 22 274 4.4E-96 T 11-10-2018 IPR008868 Bacterial TniB AMS64_22545 651703403abf3e595fe6b244b6e3cefc 296 Gene3D G3DSA:3.40.50.300 36 207 4.9E-18 T 11-10-2018 AMS64_07980 47dad43506d5c3cdf5619b56f1928014 78 Pfam PF06667 Phage shock protein B 7 76 4.8E-29 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AMS64_07980 47dad43506d5c3cdf5619b56f1928014 78 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 7 77 1.6E-25 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AMS64_19615 04a05f947ad052600e6e93bb4b24bf27 398 Pfam PF12698 ABC-2 family transporter protein 23 373 1.0E-41 T 11-10-2018 AMS64_18570 a9403b8572643d781dd27e2377846fb2 307 Gene3D G3DSA:1.25.40.10 24 302 3.9E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_18570 a9403b8572643d781dd27e2377846fb2 307 SUPERFAMILY SSF81901 46 220 6.8E-10 T 11-10-2018 AMS64_14670 a33231043e774463a2976cef382f7383 331 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 4.5E-37 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AMS64_14670 a33231043e774463a2976cef382f7383 331 Gene3D G3DSA:3.90.850.10 1 327 5.6E-133 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMS64_14670 a33231043e774463a2976cef382f7383 331 SUPERFAMILY SSF56529 77 325 1.01E-57 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMS64_13675 eaf0b77210d538f10ce2377c88384d94 217 SUPERFAMILY SSF48498 79 210 9.34E-40 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMS64_13675 eaf0b77210d538f10ce2377c88384d94 217 SUPERFAMILY SSF46689 4 72 4.82E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_13675 eaf0b77210d538f10ce2377c88384d94 217 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMS64_13675 eaf0b77210d538f10ce2377c88384d94 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 3.0E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_13675 eaf0b77210d538f10ce2377c88384d94 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 4.8E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_13675 eaf0b77210d538f10ce2377c88384d94 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 4.8E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_13675 eaf0b77210d538f10ce2377c88384d94 217 Gene3D G3DSA:1.10.357.10 1 209 3.3E-62 T 11-10-2018 AMS64_10355 d9c14c7cabeefb934ef8307232ae1554 171 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 26 163 3.1E-44 T 11-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE AMS64_10355 d9c14c7cabeefb934ef8307232ae1554 171 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 28 150 2.0E-31 T 11-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE AMS64_10355 d9c14c7cabeefb934ef8307232ae1554 171 Gene3D G3DSA:3.30.1460.40 12 145 4.2E-38 T 11-10-2018 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily AMS64_10355 d9c14c7cabeefb934ef8307232ae1554 171 Pfam PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE 21 163 8.9E-38 T 11-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE AMS64_13075 fac656c08c4dabbdc17d2b153ce7a174 338 Pfam PF01032 FecCD transport family 15 328 1.7E-82 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMS64_13075 fac656c08c4dabbdc17d2b153ce7a174 338 Gene3D G3DSA:1.10.3470.10 3 331 1.5E-79 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_13075 fac656c08c4dabbdc17d2b153ce7a174 338 SUPERFAMILY SSF81345 4 328 3.79E-67 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_12080 8615d30e4a1180df75ced82865089a1d 428 Gene3D G3DSA:3.30.2400.10 185 406 1.4E-12 T 11-10-2018 AMS64_12080 8615d30e4a1180df75ced82865089a1d 428 Pfam PF05065 Phage capsid family 136 423 2.5E-48 T 11-10-2018 IPR024455 Phage capsid AMS64_12080 8615d30e4a1180df75ced82865089a1d 428 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 11 424 5.6E-55 T 11-10-2018 IPR024455 Phage capsid AMS64_12080 8615d30e4a1180df75ced82865089a1d 428 SUPERFAMILY SSF56563 133 425 7.98E-57 T 11-10-2018 AMS64_12080 8615d30e4a1180df75ced82865089a1d 428 Gene3D G3DSA:3.30.2320.10 265 368 1.4E-12 T 11-10-2018 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 Pfam PF04542 Sigma-70 region 2 54 123 1.7E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 282 7.5E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 Pfam PF00140 Sigma-70 factor, region 1.2 20 45 1.1E-6 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 PIRSF PIRSF000770 18 284 5.7E-36 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 Pfam PF04545 Sigma-70, region 4 228 279 2.0E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 Gene3D G3DSA:1.10.10.10 213 284 1.5E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 283 5.3E-128 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 SUPERFAMILY SSF88659 197 283 3.36E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 7.3E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 7.3E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 7.3E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 PRINTS PR00046 Major sigma-70 factor signature 78 91 7.3E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 3 284 53.234 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 SUPERFAMILY SSF88946 14 123 2.62E-40 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 Gene3D G3DSA:1.20.120.1810 6 123 6.3E-29 T 11-10-2018 AMS64_21495 9d566738f84ab7b32afbdb1586d80345 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_10850 98378ca6ae6c71901cc48251ed75ad4a 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 11-10-2018 IPR033135 ClpP, histidine active site AMS64_10850 98378ca6ae6c71901cc48251ed75ad4a 207 Gene3D G3DSA:3.90.226.10 3 207 3.0E-84 T 11-10-2018 AMS64_10850 98378ca6ae6c71901cc48251ed75ad4a 207 Pfam PF00574 Clp protease 26 205 1.1E-88 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMS64_10850 98378ca6ae6c71901cc48251ed75ad4a 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 43.568 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMS64_10850 98378ca6ae6c71901cc48251ed75ad4a 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 11-10-2018 IPR018215 ClpP, Ser active site AMS64_10850 98378ca6ae6c71901cc48251ed75ad4a 207 SUPERFAMILY SSF52096 24 205 1.49E-74 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_10850 98378ca6ae6c71901cc48251ed75ad4a 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 204 1.9E-107 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMS64_10850 98378ca6ae6c71901cc48251ed75ad4a 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 3.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMS64_10850 98378ca6ae6c71901cc48251ed75ad4a 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 3.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMS64_10850 98378ca6ae6c71901cc48251ed75ad4a 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 3.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMS64_10850 98378ca6ae6c71901cc48251ed75ad4a 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 3.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMS64_10850 98378ca6ae6c71901cc48251ed75ad4a 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 3.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMS64_17510 aafca75cde479d470f79134e07c6f33a 300 SUPERFAMILY SSF53067 1 298 1.61E-53 T 11-10-2018 AMS64_17510 aafca75cde479d470f79134e07c6f33a 300 ProSitePatterns PS01125 ROK family signature. 130 157 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMS64_17510 aafca75cde479d470f79134e07c6f33a 300 Gene3D G3DSA:3.30.420.40 119 289 1.8E-84 T 11-10-2018 AMS64_17510 aafca75cde479d470f79134e07c6f33a 300 Pfam PF00480 ROK family 2 298 6.5E-64 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMS64_17510 aafca75cde479d470f79134e07c6f33a 300 Gene3D G3DSA:3.30.420.40 4 296 1.8E-84 T 11-10-2018 AMS64_17990 cd1162b99fd7d617bebfaf90c4649e8a 339 SUPERFAMILY SSF51161 31 315 6.27E-87 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_17990 cd1162b99fd7d617bebfaf90c4649e8a 339 Gene3D G3DSA:2.160.10.10 99 307 8.0E-63 T 11-10-2018 AMS64_17990 cd1162b99fd7d617bebfaf90c4649e8a 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 144 178 1.6E-5 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_17990 cd1162b99fd7d617bebfaf90c4649e8a 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 6.1E-9 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_17990 cd1162b99fd7d617bebfaf90c4649e8a 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 221 253 1.8E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_17990 cd1162b99fd7d617bebfaf90c4649e8a 339 Gene3D G3DSA:3.40.1390.10 1 98 1.3E-35 T 11-10-2018 AMS64_17990 cd1162b99fd7d617bebfaf90c4649e8a 339 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 105 133 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMS64_17990 cd1162b99fd7d617bebfaf90c4649e8a 339 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 328 2.1E-117 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AMS64_17990 cd1162b99fd7d617bebfaf90c4649e8a 339 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 1.7E-24 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AMS64_17990 cd1162b99fd7d617bebfaf90c4649e8a 339 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 325 35.053 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AMS64_21515 720cb9be32114bca1ced9990d3a95af3 209 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 136 142 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMS64_21515 720cb9be32114bca1ced9990d3a95af3 209 PIRSF PIRSF004553 23 203 3.1E-56 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AMS64_21515 720cb9be32114bca1ced9990d3a95af3 209 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 20 201 8.0E-62 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AMS64_21515 720cb9be32114bca1ced9990d3a95af3 209 Gene3D G3DSA:3.40.50.150 16 208 2.2E-64 T 11-10-2018 AMS64_21515 720cb9be32114bca1ced9990d3a95af3 209 Pfam PF03602 Conserved hypothetical protein 95 24 199 5.8E-62 T 11-10-2018 AMS64_21515 720cb9be32114bca1ced9990d3a95af3 209 SUPERFAMILY SSF53335 24 200 3.23E-54 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_00290 f2c70e6e96f05ad4b36b03a7491cf800 171 SUPERFAMILY SSF50370 52 153 2.93E-17 T 11-10-2018 IPR035992 Ricin B-like lectins AMS64_00290 f2c70e6e96f05ad4b36b03a7491cf800 171 SMART SM00458 46 155 1.3E-9 T 11-10-2018 IPR000772 Ricin B, lectin domain AMS64_00290 f2c70e6e96f05ad4b36b03a7491cf800 171 Gene3D G3DSA:2.80.10.50 48 121 7.5E-8 T 11-10-2018 AMS64_00290 f2c70e6e96f05ad4b36b03a7491cf800 171 Pfam PF00652 Ricin-type beta-trefoil lectin domain 55 152 3.9E-12 T 11-10-2018 IPR000772 Ricin B, lectin domain AMS64_00290 f2c70e6e96f05ad4b36b03a7491cf800 171 Gene3D G3DSA:2.80.10.50 122 169 2.8E-6 T 11-10-2018 AMS64_04330 302c7e992d4f9df0fb7bad7034d385df 519 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 108 3.8E-10 T 11-10-2018 IPR000014 PAS domain AMS64_04330 302c7e992d4f9df0fb7bad7034d385df 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 485 3.5E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_04330 302c7e992d4f9df0fb7bad7034d385df 519 Gene3D G3DSA:3.30.450.20 2 115 1.4E-22 T 11-10-2018 AMS64_04330 302c7e992d4f9df0fb7bad7034d385df 519 SUPERFAMILY SSF55785 19 113 1.36E-23 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_04330 302c7e992d4f9df0fb7bad7034d385df 519 SMART SM00283 257 518 1.0E-60 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_04330 302c7e992d4f9df0fb7bad7034d385df 519 SUPERFAMILY SSF58104 239 519 1.31E-63 T 11-10-2018 AMS64_04330 302c7e992d4f9df0fb7bad7034d385df 519 Gene3D G3DSA:1.10.287.950 192 518 1.7E-58 T 11-10-2018 AMS64_04330 302c7e992d4f9df0fb7bad7034d385df 519 Pfam PF08447 PAS fold 29 113 2.9E-12 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AMS64_10665 ef0dee1547859936b4d0bc28e1b2c573 370 Pfam PF16113 Enoyl-CoA hydratase/isomerase 18 344 4.3E-110 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AMS64_10665 ef0dee1547859936b4d0bc28e1b2c573 370 Gene3D G3DSA:3.90.226.10 5 359 2.0E-116 T 11-10-2018 AMS64_10665 ef0dee1547859936b4d0bc28e1b2c573 370 SUPERFAMILY SSF52096 14 344 9.64E-65 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_00925 c30702bc4e614365dbdf177f45b3c8a1 240 SMART SM00448 5 115 4.0E-49 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_00925 c30702bc4e614365dbdf177f45b3c8a1 240 SMART SM00862 156 232 2.6E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_00925 c30702bc4e614365dbdf177f45b3c8a1 240 Gene3D G3DSA:1.10.10.10 124 238 1.1E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_00925 c30702bc4e614365dbdf177f45b3c8a1 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 232 2.4E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_00925 c30702bc4e614365dbdf177f45b3c8a1 240 SUPERFAMILY SSF46894 137 234 8.22E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_00925 c30702bc4e614365dbdf177f45b3c8a1 240 Gene3D G3DSA:3.40.50.2300 2 123 3.8E-42 T 11-10-2018 AMS64_00925 c30702bc4e614365dbdf177f45b3c8a1 240 Pfam PF00072 Response regulator receiver domain 8 116 2.6E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_00925 c30702bc4e614365dbdf177f45b3c8a1 240 SUPERFAMILY SSF52172 2 129 8.11E-46 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_13960 fe398d8072f1147b2c54f6d1966f3d00 609 Pfam PF06276 Ferric iron reductase FhuF-like transporter 430 588 1.1E-26 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain AMS64_13960 fe398d8072f1147b2c54f6d1966f3d00 609 Gene3D G3DSA:3.10.450.440 45 111 3.4E-6 T 11-10-2018 AMS64_13960 fe398d8072f1147b2c54f6d1966f3d00 609 Pfam PF04183 IucA / IucC family 163 383 5.1E-49 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AMS64_13960 fe398d8072f1147b2c54f6d1966f3d00 609 Gene3D G3DSA:1.10.510.40 392 565 1.5E-17 T 11-10-2018 AMS64_13960 fe398d8072f1147b2c54f6d1966f3d00 609 Gene3D G3DSA:1.10.150.640 26 149 3.4E-6 T 11-10-2018 AMS64_02480 197e4cef98a25ab3041dbfde33ff7c91 153 Pfam PF05926 Phage head completion protein (GPL) 14 153 3.7E-37 T 11-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 AMS64_19980 4f77be9ce224f5117c1f731c16dd537f 937 Gene3D G3DSA:3.30.830.10 510 711 1.0E-38 T 11-10-2018 AMS64_19980 4f77be9ce224f5117c1f731c16dd537f 937 Gene3D G3DSA:3.30.830.10 263 459 2.2E-36 T 11-10-2018 AMS64_19980 4f77be9ce224f5117c1f731c16dd537f 937 SUPERFAMILY SSF63411 263 454 2.83E-35 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMS64_19980 4f77be9ce224f5117c1f731c16dd537f 937 SUPERFAMILY SSF63411 734 927 1.83E-38 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMS64_19980 4f77be9ce224f5117c1f731c16dd537f 937 Pfam PF05193 Peptidase M16 inactive domain 206 383 3.6E-26 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AMS64_19980 4f77be9ce224f5117c1f731c16dd537f 937 Pfam PF05193 Peptidase M16 inactive domain 672 847 7.0E-25 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AMS64_19980 4f77be9ce224f5117c1f731c16dd537f 937 SUPERFAMILY SSF63411 36 245 3.67E-55 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMS64_19980 4f77be9ce224f5117c1f731c16dd537f 937 Gene3D G3DSA:3.30.830.10 727 925 2.1E-41 T 11-10-2018 AMS64_19980 4f77be9ce224f5117c1f731c16dd537f 937 SUPERFAMILY SSF63411 505 708 3.67E-43 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMS64_19980 4f77be9ce224f5117c1f731c16dd537f 937 Gene3D G3DSA:3.30.830.10 34 260 2.3E-66 T 11-10-2018 AMS64_19980 4f77be9ce224f5117c1f731c16dd537f 937 Pfam PF00675 Insulinase (Peptidase family M16) 526 641 2.0E-11 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AMS64_19980 4f77be9ce224f5117c1f731c16dd537f 937 Pfam PF00675 Insulinase (Peptidase family M16) 49 184 1.3E-17 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AMS64_09455 ddb8e328a9f4e60ddd8c420ef8b91b0f 251 Gene3D G3DSA:2.60.120.10 43 164 1.1E-47 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_09455 ddb8e328a9f4e60ddd8c420ef8b91b0f 251 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.5E-14 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_09455 ddb8e328a9f4e60ddd8c420ef8b91b0f 251 SMART SM00419 187 235 1.6E-17 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMS64_09455 ddb8e328a9f4e60ddd8c420ef8b91b0f 251 Gene3D G3DSA:1.10.10.10 165 247 8.4E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_09455 ddb8e328a9f4e60ddd8c420ef8b91b0f 251 SUPERFAMILY SSF46785 165 242 8.73E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_09455 ddb8e328a9f4e60ddd8c420ef8b91b0f 251 Pfam PF13545 Crp-like helix-turn-helix domain 168 239 3.3E-17 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMS64_09455 ddb8e328a9f4e60ddd8c420ef8b91b0f 251 SUPERFAMILY SSF51206 23 162 9.82E-31 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMS64_09455 ddb8e328a9f4e60ddd8c420ef8b91b0f 251 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AMS64_09455 ddb8e328a9f4e60ddd8c420ef8b91b0f 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 6.0E-13 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMS64_09455 ddb8e328a9f4e60ddd8c420ef8b91b0f 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 6.0E-13 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMS64_09455 ddb8e328a9f4e60ddd8c420ef8b91b0f 251 SMART SM00100 30 151 1.8E-19 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_13110 0675d04e5ee21ab874305da4a4c36114 254 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 254 44.599 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AMS64_13110 0675d04e5ee21ab874305da4a4c36114 254 PIRSF PIRSF005457 1 254 5.7E-93 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AMS64_13110 0675d04e5ee21ab874305da4a4c36114 254 SUPERFAMILY SSF56281 5 254 2.1E-69 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_13110 0675d04e5ee21ab874305da4a4c36114 254 Gene3D G3DSA:3.60.15.10 1 254 5.4E-92 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_13110 0675d04e5ee21ab874305da4a4c36114 254 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 3.6E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_13110 0675d04e5ee21ab874305da4a4c36114 254 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 254 4.8E-101 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AMS64_13110 0675d04e5ee21ab874305da4a4c36114 254 SMART SM00849 12 166 8.0E-34 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_13110 0675d04e5ee21ab874305da4a4c36114 254 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 254 2.2E-23 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AMS64_17120 7629aa1fc99c32ef8cc9e08af4fd962f 408 Pfam PF00149 Calcineurin-like phosphoesterase 1 232 2.3E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMS64_17120 7629aa1fc99c32ef8cc9e08af4fd962f 408 Gene3D G3DSA:3.60.21.10 1 281 6.2E-76 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMS64_17120 7629aa1fc99c32ef8cc9e08af4fd962f 408 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 283 383 1.1E-12 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AMS64_17120 7629aa1fc99c32ef8cc9e08af4fd962f 408 SUPERFAMILY SSF56300 1 344 2.37E-49 T 11-10-2018 AMS64_17120 7629aa1fc99c32ef8cc9e08af4fd962f 408 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 1.3E-57 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AMS64_21855 53b5a3f6c75cb1369dc9fd2fe5e65728 826 Gene3D G3DSA:2.40.40.20 657 820 5.4E-48 T 11-10-2018 AMS64_21855 53b5a3f6c75cb1369dc9fd2fe5e65728 826 Gene3D G3DSA:3.40.228.10 198 649 3.2E-235 T 11-10-2018 AMS64_21855 53b5a3f6c75cb1369dc9fd2fe5e65728 826 Gene3D G3DSA:3.90.55.10 61 623 3.2E-235 T 11-10-2018 AMS64_21855 53b5a3f6c75cb1369dc9fd2fe5e65728 826 Gene3D G3DSA:3.40.50.740 105 572 3.2E-235 T 11-10-2018 AMS64_21855 53b5a3f6c75cb1369dc9fd2fe5e65728 826 SUPERFAMILY SSF50692 676 820 9.27E-39 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMS64_21855 53b5a3f6c75cb1369dc9fd2fe5e65728 826 SUPERFAMILY SSF53706 63 683 3.66E-170 T 11-10-2018 AMS64_21855 53b5a3f6c75cb1369dc9fd2fe5e65728 826 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 34 1.8E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMS64_21855 53b5a3f6c75cb1369dc9fd2fe5e65728 826 Pfam PF01568 Molydopterin dinucleotide binding domain 683 798 3.0E-23 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMS64_21855 53b5a3f6c75cb1369dc9fd2fe5e65728 826 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 62 822 0.0 T 11-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 AMS64_21855 53b5a3f6c75cb1369dc9fd2fe5e65728 826 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 506 523 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AMS64_21855 53b5a3f6c75cb1369dc9fd2fe5e65728 826 Pfam PF00384 Molybdopterin oxidoreductase 105 563 1.5E-92 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_11660 5d06db7081cb2b28f00659c86a2b0149 167 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 5.2E-47 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AMS64_11660 5d06db7081cb2b28f00659c86a2b0149 167 SUPERFAMILY SSF46785 2 133 1.03E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_11660 5d06db7081cb2b28f00659c86a2b0149 167 Pfam PF02082 Transcriptional regulator 1 83 5.5E-28 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AMS64_11660 5d06db7081cb2b28f00659c86a2b0149 167 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 7.4E-65 T 11-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AMS64_11660 5d06db7081cb2b28f00659c86a2b0149 167 Gene3D G3DSA:1.10.10.10 1 144 4.2E-54 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_11660 5d06db7081cb2b28f00659c86a2b0149 167 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AMS64_11945 06e5386887930471b59b25f3d7235cdc 1400 SUPERFAMILY SSF52540 797 1191 3.1E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11945 06e5386887930471b59b25f3d7235cdc 1400 Pfam PF00271 Helicase conserved C-terminal domain 1124 1182 1.2E-6 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_11945 06e5386887930471b59b25f3d7235cdc 1400 SUPERFAMILY SSF52540 591 1219 2.6E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11945 06e5386887930471b59b25f3d7235cdc 1400 Gene3D G3DSA:3.40.50.300 1043 1210 1.0E-7 T 11-10-2018 AMS64_11945 06e5386887930471b59b25f3d7235cdc 1400 SMART SM00490 1085 1183 0.0064 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_01955 c8000855ba156733468f3259ae764120 103 SUPERFAMILY SSF54999 5 101 1.23E-36 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AMS64_01955 c8000855ba156733468f3259ae764120 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.412 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01955 c8000855ba156733468f3259ae764120 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01955 c8000855ba156733468f3259ae764120 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01955 c8000855ba156733468f3259ae764120 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01955 c8000855ba156733468f3259ae764120 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 3.0E-35 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AMS64_01955 c8000855ba156733468f3259ae764120 103 SMART SM01403 7 101 9.2E-57 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AMS64_01955 c8000855ba156733468f3259ae764120 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.3E-46 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01955 c8000855ba156733468f3259ae764120 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01955 c8000855ba156733468f3259ae764120 103 Gene3D G3DSA:3.30.70.600 1 103 4.0E-38 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AMS64_03335 ac9d8dc299b761ed0a78a5b5c116d1d1 156 Pfam PF13975 gag-polyprotein putative aspartyl protease 51 139 1.8E-20 T 11-10-2018 AMS64_03335 ac9d8dc299b761ed0a78a5b5c116d1d1 156 Gene3D G3DSA:2.40.70.10 31 152 1.0E-26 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMS64_03335 ac9d8dc299b761ed0a78a5b5c116d1d1 156 SUPERFAMILY SSF50630 41 142 7.29E-17 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMS64_03335 ac9d8dc299b761ed0a78a5b5c116d1d1 156 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 39 152 2.0E-23 T 11-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal AMS64_03335 ac9d8dc299b761ed0a78a5b5c116d1d1 156 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 61 72 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AMS64_06570 56efcc70a8cf9a1506a104a8a8639d01 353 Pfam PF11104 Type IV pilus assembly protein PilM; 15 348 1.1E-99 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AMS64_06570 56efcc70a8cf9a1506a104a8a8639d01 353 SUPERFAMILY SSF53067 189 348 6.25E-22 T 11-10-2018 AMS64_06570 56efcc70a8cf9a1506a104a8a8639d01 353 SMART SM00842 13 179 0.0017 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AMS64_06570 56efcc70a8cf9a1506a104a8a8639d01 353 Gene3D G3DSA:3.30.420.40 188 315 3.0E-72 T 11-10-2018 AMS64_06570 56efcc70a8cf9a1506a104a8a8639d01 353 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 13 348 2.0E-80 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AMS64_06570 56efcc70a8cf9a1506a104a8a8639d01 353 Gene3D G3DSA:3.30.1490.300 89 147 3.0E-72 T 11-10-2018 AMS64_06570 56efcc70a8cf9a1506a104a8a8639d01 353 SUPERFAMILY SSF53067 63 175 5.18E-9 T 11-10-2018 AMS64_06570 56efcc70a8cf9a1506a104a8a8639d01 353 PIRSF PIRSF019169 4 349 1.2E-91 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AMS64_06570 56efcc70a8cf9a1506a104a8a8639d01 353 Gene3D G3DSA:3.30.420.40 14 346 3.0E-72 T 11-10-2018 AMS64_10835 580864ae959bea7412f6c8785584c716 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.6E-33 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_10835 580864ae959bea7412f6c8785584c716 90 SMART SM00411 1 90 1.6E-44 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_10835 580864ae959bea7412f6c8785584c716 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 9.2E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_10835 580864ae959bea7412f6c8785584c716 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 9.2E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_10835 580864ae959bea7412f6c8785584c716 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 9.2E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_10835 580864ae959bea7412f6c8785584c716 90 SUPERFAMILY SSF47729 1 90 3.53E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMS64_10835 580864ae959bea7412f6c8785584c716 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMS64_10835 580864ae959bea7412f6c8785584c716 90 Gene3D G3DSA:4.10.520.10 1 90 3.6E-36 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMS64_08520 0c81f1e983df86b15c17a33092de9bf7 330 Pfam PF03595 Voltage-dependent anion channel 21 306 3.8E-31 T 11-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AMS64_08520 0c81f1e983df86b15c17a33092de9bf7 330 Gene3D G3DSA:1.50.10.150 6 315 1.2E-44 T 11-10-2018 IPR038665 Voltage-dependent anion channel superfamily AMS64_00055 88dba2e1cb2263fcf44da2b6792e9b91 716 SUPERFAMILY SSF56436 208 462 3.3E-54 T 11-10-2018 IPR016187 C-type lectin fold AMS64_00055 88dba2e1cb2263fcf44da2b6792e9b91 716 Pfam PF08241 Methyltransferase domain 518 642 1.3E-10 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMS64_00055 88dba2e1cb2263fcf44da2b6792e9b91 716 Pfam PF12867 DinB superfamily 44 174 2.3E-8 T 11-10-2018 IPR024775 DinB-like domain AMS64_00055 88dba2e1cb2263fcf44da2b6792e9b91 716 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 475 715 4.5E-97 T 11-10-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain AMS64_00055 88dba2e1cb2263fcf44da2b6792e9b91 716 Gene3D G3DSA:3.40.50.150 480 654 2.8E-27 T 11-10-2018 AMS64_00055 88dba2e1cb2263fcf44da2b6792e9b91 716 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 20 461 6.0E-204 T 11-10-2018 IPR027577 5-histidylcysteine sulfoxide synthase AMS64_00055 88dba2e1cb2263fcf44da2b6792e9b91 716 Pfam PF03781 Sulfatase-modifying factor enzyme 1 210 460 4.5E-26 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AMS64_00055 88dba2e1cb2263fcf44da2b6792e9b91 716 Gene3D G3DSA:3.90.1580.10 196 470 1.9E-25 T 11-10-2018 AMS64_00055 88dba2e1cb2263fcf44da2b6792e9b91 716 SUPERFAMILY SSF53335 475 668 1.07E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_11430 147e2cf74877c11510147c502cf03a4f 127 Gene3D G3DSA:3.90.1150.30 1 125 1.1E-42 T 11-10-2018 IPR038056 YjbR-like superfamily AMS64_11430 147e2cf74877c11510147c502cf03a4f 127 SUPERFAMILY SSF142906 1 113 1.01E-37 T 11-10-2018 IPR038056 YjbR-like superfamily AMS64_11430 147e2cf74877c11510147c502cf03a4f 127 Pfam PF04237 YjbR 11 101 7.5E-28 T 11-10-2018 IPR007351 Uncharacterised protein YjbR AMS64_06940 d7826403cab86141786c51d3b1bf6ec5 130 Pfam PF06476 Protein of unknown function (DUF1090) 13 113 3.8E-28 T 11-10-2018 IPR009468 Protein of unknown function DUF1090 AMS64_03575 018f1c632268d23ba82faf448850106a 166 Pfam PF02631 RecX family 43 159 2.2E-24 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AMS64_03575 018f1c632268d23ba82faf448850106a 166 Hamap MF_01114 Regulatory protein RecX [recX]. 7 165 13.905 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AMS64_03575 018f1c632268d23ba82faf448850106a 166 Gene3D G3DSA:1.10.10.10 68 111 8.3E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_03575 018f1c632268d23ba82faf448850106a 166 Gene3D G3DSA:1.10.10.10 20 65 1.5E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_03575 018f1c632268d23ba82faf448850106a 166 Gene3D G3DSA:1.10.10.10 113 162 8.6E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_00410 4bed4f82a16c106a28a9cf74b0fa9999 254 Gene3D G3DSA:3.40.630.30 109 239 4.1E-10 T 11-10-2018 AMS64_00410 4bed4f82a16c106a28a9cf74b0fa9999 254 SUPERFAMILY SSF55729 135 231 4.77E-10 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_00410 4bed4f82a16c106a28a9cf74b0fa9999 254 Pfam PF00583 Acetyltransferase (GNAT) family 139 222 6.2E-6 T 11-10-2018 IPR000182 GNAT domain AMS64_17195 158c9ab0d877757df1d23e53eeadd297 373 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 147 163 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AMS64_17195 158c9ab0d877757df1d23e53eeadd297 373 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 282 370 7.4E-21 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMS64_17195 158c9ab0d877757df1d23e53eeadd297 373 Gene3D G3DSA:3.40.47.10 1 214 1.4E-57 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_17195 158c9ab0d877757df1d23e53eeadd297 373 Gene3D G3DSA:3.40.47.10 219 371 1.7E-36 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_17195 158c9ab0d877757df1d23e53eeadd297 373 SUPERFAMILY SSF53901 3 371 3.89E-52 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_17195 158c9ab0d877757df1d23e53eeadd297 373 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 150 215 4.7E-19 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMS64_01115 ae37d608b6524435060fc65d3730df3f 953 Gene3D G3DSA:3.40.50.300 644 839 3.8E-24 T 11-10-2018 AMS64_01115 ae37d608b6524435060fc65d3730df3f 953 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 912 936 1.6E-6 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMS64_01115 ae37d608b6524435060fc65d3730df3f 953 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 849 872 0.14 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMS64_01115 ae37d608b6524435060fc65d3730df3f 953 SUPERFAMILY SSF52540 190 828 3.33E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01115 ae37d608b6524435060fc65d3730df3f 953 Gene3D G3DSA:3.40.50.300 438 639 2.5E-25 T 11-10-2018 AMS64_01115 ae37d608b6524435060fc65d3730df3f 953 Pfam PF00580 UvrD/REP helicase N-terminal domain 191 630 2.0E-41 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMS64_01115 ae37d608b6524435060fc65d3730df3f 953 Gene3D G3DSA:3.40.50.300 187 330 5.2E-22 T 11-10-2018 AMS64_01115 ae37d608b6524435060fc65d3730df3f 953 SUPERFAMILY SSF57783 912 936 9.01E-6 T 11-10-2018 AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 SMART SM00388 255 320 1.0E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 SUPERFAMILY SSF47384 254 321 4.9E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 SUPERFAMILY SSF103190 77 176 7.85E-10 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 SMART SM00387 364 473 7.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 Gene3D G3DSA:3.30.565.10 318 472 8.7E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 1.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 1.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 1.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 1.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 SUPERFAMILY SSF55874 310 472 3.8E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 Gene3D G3DSA:1.10.287.130 260 317 9.3E-14 T 11-10-2018 AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 472 2.0E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00585 197454c9106b04b82f573a45164a2fe9 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 320 1.3E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_13285 bd65e93d8de359eca9f75900b70e28d8 217 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 12 129 6.0E-54 T 11-10-2018 IPR013559 YheO-like AMS64_13285 bd65e93d8de359eca9f75900b70e28d8 217 Pfam PF08348 YheO-like PAS domain 14 119 3.7E-34 T 11-10-2018 IPR013559 YheO-like AMS64_13285 bd65e93d8de359eca9f75900b70e28d8 217 Pfam PF13309 HTH domain 155 212 1.6E-14 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain AMS64_20685 2aedd2bc3df092957d8e8f5740cc8825 226 SUPERFAMILY SSF56784 10 221 1.33E-44 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_20685 2aedd2bc3df092957d8e8f5740cc8825 226 Pfam PF00702 haloacid dehalogenase-like hydrolase 14 188 5.8E-11 T 11-10-2018 AMS64_20685 2aedd2bc3df092957d8e8f5740cc8825 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 14 25 1.2E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_20685 2aedd2bc3df092957d8e8f5740cc8825 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 1.2E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_20685 2aedd2bc3df092957d8e8f5740cc8825 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 158 178 1.2E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_20685 2aedd2bc3df092957d8e8f5740cc8825 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 109 122 1.2E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_20685 2aedd2bc3df092957d8e8f5740cc8825 226 Gene3D G3DSA:3.40.50.1000 13 203 1.8E-25 T 11-10-2018 IPR023214 HAD superfamily AMS64_20685 2aedd2bc3df092957d8e8f5740cc8825 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 193 3.0E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_10900 380fcf3f8e428d31318041828b65702b 538 Gene3D G3DSA:3.40.190.10 38 519 5.6E-187 T 11-10-2018 AMS64_10900 380fcf3f8e428d31318041828b65702b 538 SUPERFAMILY SSF53850 33 526 4.09E-141 T 11-10-2018 AMS64_10900 380fcf3f8e428d31318041828b65702b 538 Gene3D G3DSA:3.10.105.10 292 507 5.6E-187 T 11-10-2018 AMS64_10900 380fcf3f8e428d31318041828b65702b 538 Gene3D G3DSA:3.90.76.10 67 191 5.6E-187 T 11-10-2018 AMS64_10900 380fcf3f8e428d31318041828b65702b 538 PIRSF PIRSF002741 2 538 5.1E-106 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMS64_10900 380fcf3f8e428d31318041828b65702b 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 458 7.5E-89 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AMS64_21795 8b8f5dfde03a9f9343797bcacf5809c0 312 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 7 312 1.5E-155 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AMS64_21795 8b8f5dfde03a9f9343797bcacf5809c0 312 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 86 240 6.6E-15 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AMS64_21795 8b8f5dfde03a9f9343797bcacf5809c0 312 Hamap MF_00215 Pantothenate kinase [coaA]. 1 312 183.448 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AMS64_21795 8b8f5dfde03a9f9343797bcacf5809c0 312 Gene3D G3DSA:3.40.50.300 1 312 1.2E-95 T 11-10-2018 AMS64_21795 8b8f5dfde03a9f9343797bcacf5809c0 312 SUPERFAMILY SSF52540 3 312 2.17E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_21795 8b8f5dfde03a9f9343797bcacf5809c0 312 PIRSF PIRSF000545 1 312 9.7E-148 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AMS64_05545 921543523431aadc5138b74e0433409e 651 SMART SM00052 399 644 1.4E-102 T 11-10-2018 IPR001633 EAL domain AMS64_05545 921543523431aadc5138b74e0433409e 651 Gene3D G3DSA:3.20.20.450 402 650 9.2E-93 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_05545 921543523431aadc5138b74e0433409e 651 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 259 383 7.7E-15 T 11-10-2018 IPR000160 GGDEF domain AMS64_05545 921543523431aadc5138b74e0433409e 651 SMART SM00091 129 196 1.1 T 11-10-2018 IPR000014 PAS domain AMS64_05545 921543523431aadc5138b74e0433409e 651 SMART SM00091 5 77 0.14 T 11-10-2018 IPR000014 PAS domain AMS64_05545 921543523431aadc5138b74e0433409e 651 SMART SM00267 228 388 5.4E-17 T 11-10-2018 IPR000160 GGDEF domain AMS64_05545 921543523431aadc5138b74e0433409e 651 SUPERFAMILY SSF55073 244 387 4.63E-23 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_05545 921543523431aadc5138b74e0433409e 651 SUPERFAMILY SSF141868 406 647 8.24E-85 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_05545 921543523431aadc5138b74e0433409e 651 Gene3D G3DSA:3.30.450.20 4 129 2.9E-16 T 11-10-2018 AMS64_05545 921543523431aadc5138b74e0433409e 651 Pfam PF08448 PAS fold 12 118 4.8E-15 T 11-10-2018 IPR013656 PAS fold-4 AMS64_05545 921543523431aadc5138b74e0433409e 651 Pfam PF00990 Diguanylate cyclase, GGDEF domain 240 384 9.7E-23 T 11-10-2018 IPR000160 GGDEF domain AMS64_05545 921543523431aadc5138b74e0433409e 651 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 122 4.2E-8 T 11-10-2018 IPR000014 PAS domain AMS64_05545 921543523431aadc5138b74e0433409e 651 SUPERFAMILY SSF55785 114 226 5.06E-15 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_05545 921543523431aadc5138b74e0433409e 651 Gene3D G3DSA:3.30.70.270 237 401 1.8E-28 T 11-10-2018 AMS64_05545 921543523431aadc5138b74e0433409e 651 Pfam PF13188 PAS domain 133 174 2.5E-4 T 11-10-2018 IPR000014 PAS domain AMS64_05545 921543523431aadc5138b74e0433409e 651 Gene3D G3DSA:3.30.450.20 136 236 3.0E-7 T 11-10-2018 AMS64_05545 921543523431aadc5138b74e0433409e 651 SUPERFAMILY SSF55785 7 110 1.66E-13 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_05545 921543523431aadc5138b74e0433409e 651 Pfam PF00563 EAL domain 406 639 1.7E-71 T 11-10-2018 IPR001633 EAL domain AMS64_07665 eefe8413cc3aade1db65885e261d4b61 140 SUPERFAMILY SSF69635 3 107 2.51E-5 T 11-10-2018 AMS64_07665 eefe8413cc3aade1db65885e261d4b61 140 Gene3D G3DSA:3.30.1460.10 1 124 5.1E-8 T 11-10-2018 AMS64_16750 f0ce0a38b9d86fac07e8c106af37a0a1 374 Gene3D G3DSA:1.10.3210.10 154 361 5.5E-68 T 11-10-2018 AMS64_16750 f0ce0a38b9d86fac07e8c106af37a0a1 374 SMART SM00471 169 317 3.6E-6 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_16750 f0ce0a38b9d86fac07e8c106af37a0a1 374 Pfam PF01966 HD domain 174 307 9.0E-17 T 11-10-2018 IPR006674 HD domain AMS64_16750 f0ce0a38b9d86fac07e8c106af37a0a1 374 SUPERFAMILY SSF55781 9 145 2.31E-13 T 11-10-2018 AMS64_16750 f0ce0a38b9d86fac07e8c106af37a0a1 374 Gene3D G3DSA:3.30.450.40 2 148 1.5E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_16750 f0ce0a38b9d86fac07e8c106af37a0a1 374 SUPERFAMILY SSF109604 167 344 9.42E-39 T 11-10-2018 AMS64_21255 1f0ba6607183ba2e71d0ffceb9f5d2db 490 Gene3D G3DSA:3.40.50.300 1 80 3.8E-8 T 11-10-2018 AMS64_21255 1f0ba6607183ba2e71d0ffceb9f5d2db 490 Pfam PF13175 AAA ATPase domain 1 50 5.2E-9 T 11-10-2018 AMS64_21255 1f0ba6607183ba2e71d0ffceb9f5d2db 490 SUPERFAMILY SSF52540 1 117 2.01E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_22495 1a2fe692328ff5c6d1210cba2d5f74d9 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 321 2.4E-43 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMS64_22495 1a2fe692328ff5c6d1210cba2d5f74d9 548 Gene3D G3DSA:3.40.50.970 344 522 5.5E-119 T 11-10-2018 AMS64_22495 1a2fe692328ff5c6d1210cba2d5f74d9 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 3.6E-47 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMS64_22495 1a2fe692328ff5c6d1210cba2d5f74d9 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 4.2E-211 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMS64_22495 1a2fe692328ff5c6d1210cba2d5f74d9 548 Gene3D G3DSA:3.40.50.970 1 178 7.9E-69 T 11-10-2018 AMS64_22495 1a2fe692328ff5c6d1210cba2d5f74d9 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AMS64_22495 1a2fe692328ff5c6d1210cba2d5f74d9 548 SUPERFAMILY SSF52518 1 175 1.67E-62 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_22495 1a2fe692328ff5c6d1210cba2d5f74d9 548 SUPERFAMILY SSF52467 182 341 1.47E-55 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMS64_22495 1a2fe692328ff5c6d1210cba2d5f74d9 548 SUPERFAMILY SSF52518 356 546 4.95E-61 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_22495 1a2fe692328ff5c6d1210cba2d5f74d9 548 Gene3D G3DSA:3.40.50.1220 187 343 5.5E-119 T 11-10-2018 AMS64_22495 1a2fe692328ff5c6d1210cba2d5f74d9 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 168 9.1E-57 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.2E-23 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 Gene3D G3DSA:3.30.1360.10 17 228 1.5E-83 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 7.6E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 11-10-2018 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 SMART SM00662 23 234 4.8E-103 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 Gene3D G3DSA:1.10.150.20 244 329 9.7E-39 T 11-10-2018 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 Gene3D G3DSA:2.170.120.12 53 177 1.5E-83 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 SUPERFAMILY SSF56553 53 178 6.98E-41 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 SUPERFAMILY SSF55257 7 233 7.85E-29 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 9.2E-111 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_02080 0678c5d2e02d6a6231f23763a0577406 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.607 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_16080 9a0ed0c6983ef286d72a4b9fb115011e 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 8.2E-20 T 11-10-2018 IPR021249 Protein of unknown function DUF2788 AMS64_00455 e899a5ad7d355d623f7dcf631b708d4e 119 SUPERFAMILY SSF54211 6 118 3.54E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_00455 e899a5ad7d355d623f7dcf631b708d4e 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AMS64_00455 e899a5ad7d355d623f7dcf631b708d4e 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 7 116 17.854 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMS64_00455 e899a5ad7d355d623f7dcf631b708d4e 119 Gene3D G3DSA:3.30.230.10 3 119 2.6E-41 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_00455 e899a5ad7d355d623f7dcf631b708d4e 119 Pfam PF00825 Ribonuclease P 7 113 4.3E-33 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMS64_00455 e899a5ad7d355d623f7dcf631b708d4e 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 7 114 7.3E-30 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMS64_00455 e899a5ad7d355d623f7dcf631b708d4e 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 106 2.0E-27 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMS64_21090 f6c550a17fcf66cf8b9c9326c1526374 206 Pfam PF13505 Outer membrane protein beta-barrel domain 45 206 1.6E-7 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AMS64_21090 f6c550a17fcf66cf8b9c9326c1526374 206 Gene3D G3DSA:2.40.160.20 24 206 3.7E-10 T 11-10-2018 AMS64_21090 f6c550a17fcf66cf8b9c9326c1526374 206 SUPERFAMILY SSF56925 26 206 2.62E-11 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMS64_19715 9712a413b81f57e369cd8e9ee7c97aaf 326 Gene3D G3DSA:3.40.190.10 23 296 6.5E-114 T 11-10-2018 AMS64_19715 9712a413b81f57e369cd8e9ee7c97aaf 326 Pfam PF13343 Bacterial extracellular solute-binding protein 74 286 6.5E-20 T 11-10-2018 AMS64_19715 9712a413b81f57e369cd8e9ee7c97aaf 326 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 320 2.4E-135 T 11-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 AMS64_19715 9712a413b81f57e369cd8e9ee7c97aaf 326 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 13 326 4.4E-145 T 11-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 AMS64_19715 9712a413b81f57e369cd8e9ee7c97aaf 326 Gene3D G3DSA:3.40.190.10 123 320 6.5E-114 T 11-10-2018 AMS64_19715 9712a413b81f57e369cd8e9ee7c97aaf 326 SUPERFAMILY SSF53850 21 320 4.91E-64 T 11-10-2018 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 Pfam PF10509 Galactokinase galactose-binding signature 11 57 8.4E-23 T 11-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 PIRSF PIRSF000530 1 382 4.9E-121 T 11-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 8.5E-45 T 11-10-2018 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 8.5E-45 T 11-10-2018 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 8.5E-45 T 11-10-2018 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 8.5E-45 T 11-10-2018 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 SUPERFAMILY SSF54211 4 203 2.2E-65 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 SUPERFAMILY SSF55060 204 381 1.02E-48 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 PRINTS PR00473 Galactokinase signature 92 103 2.6E-29 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 PRINTS PR00473 Galactokinase signature 263 277 2.6E-29 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 PRINTS PR00473 Galactokinase signature 27 45 2.6E-29 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 PRINTS PR00473 Galactokinase signature 112 130 2.6E-29 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 TIGRFAM TIGR00131 gal_kin: galactokinase 5 381 5.1E-140 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 Hamap MF_00246 Galactokinase [galK]. 25 381 42.378 T 11-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 11-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 Gene3D G3DSA:3.30.230.10 22 201 1.3E-129 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 Gene3D G3DSA:3.30.70.890 202 357 1.3E-129 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 Pfam PF00288 GHMP kinases N terminal domain 114 181 4.6E-13 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMS64_01580 02cbab2ff6286ab9aeac4ecca49f2be2 382 Pfam PF08544 GHMP kinases C terminal 279 361 1.0E-11 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AMS64_06490 5c7acd840a27536b6fd5366921f72d96 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 2 109 3.0E-29 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AMS64_06490 5c7acd840a27536b6fd5366921f72d96 118 PIRSF PIRSF000179 1 116 1.7E-46 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AMS64_06490 5c7acd840a27536b6fd5366921f72d96 118 Gene3D G3DSA:1.20.1300.10 1 115 3.2E-44 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06490 5c7acd840a27536b6fd5366921f72d96 118 SUPERFAMILY SSF81343 2 113 4.91E-41 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06490 5c7acd840a27536b6fd5366921f72d96 118 Pfam PF02313 Fumarate reductase subunit D 1 112 2.5E-47 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AMS64_16100 6ebc733c06baf5169edb050c35d575a5 142 Pfam PF01475 Ferric uptake regulator family 10 130 8.2E-46 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMS64_16100 6ebc733c06baf5169edb050c35d575a5 142 Gene3D G3DSA:3.30.1490.190 85 142 5.8E-23 T 11-10-2018 AMS64_16100 6ebc733c06baf5169edb050c35d575a5 142 Gene3D G3DSA:1.10.10.10 1 84 5.7E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_16100 6ebc733c06baf5169edb050c35d575a5 142 SUPERFAMILY SSF46785 5 134 3.83E-43 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 33.176 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 SUPERFAMILY SSF48163 299 461 4.32E-47 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 4.5E-118 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 Gene3D G3DSA:1.10.10.350 366 470 3.7E-24 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.2E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 2.2E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.2E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 2.2E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.2E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 459 1.6E-198 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 SUPERFAMILY SSF52374 2 298 1.77E-113 T 11-10-2018 AMS64_19190 ff4b96d85a80e41025d3f7ee37c5a3fd 471 Gene3D G3DSA:3.40.50.620 1 314 3.4E-137 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_06005 078ced6aa8564c15794fd28a6025bd10 509 SMART SM00052 256 502 6.6E-96 T 11-10-2018 IPR001633 EAL domain AMS64_06005 078ced6aa8564c15794fd28a6025bd10 509 Pfam PF12792 CSS motif domain associated with EAL 43 230 1.6E-29 T 11-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AMS64_06005 078ced6aa8564c15794fd28a6025bd10 509 Gene3D G3DSA:3.20.20.450 256 508 8.7E-81 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_06005 078ced6aa8564c15794fd28a6025bd10 509 SUPERFAMILY SSF141868 262 507 3.92E-74 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_06005 078ced6aa8564c15794fd28a6025bd10 509 Pfam PF00563 EAL domain 262 497 8.5E-63 T 11-10-2018 IPR001633 EAL domain AMS64_07645 ed4be2f2cb1e5b7cb6ff170f9af02f83 523 Pfam PF02378 Phosphotransferase system, EIIC 18 358 5.8E-80 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMS64_07645 ed4be2f2cb1e5b7cb6ff170f9af02f83 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 460 477 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMS64_07645 ed4be2f2cb1e5b7cb6ff170f9af02f83 523 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 7 521 6.3E-272 T 11-10-2018 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 KEGG: 00500+2.7.1.208 AMS64_07645 ed4be2f2cb1e5b7cb6ff170f9af02f83 523 SUPERFAMILY SSF55604 450 522 4.18E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AMS64_07645 ed4be2f2cb1e5b7cb6ff170f9af02f83 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 418 507 1.8E-22 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMS64_07645 ed4be2f2cb1e5b7cb6ff170f9af02f83 523 Pfam PF00367 phosphotransferase system, EIIB 451 482 1.4E-12 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMS64_07645 ed4be2f2cb1e5b7cb6ff170f9af02f83 523 Gene3D G3DSA:3.30.1360.60 448 521 4.1E-24 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AMS64_14535 d36594ca6aa4776b4ac264a9f430dbc7 183 Gene3D G3DSA:1.20.120.1200 1 159 1.5E-43 T 11-10-2018 AMS64_14535 d36594ca6aa4776b4ac264a9f430dbc7 183 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 157 5.8E-30 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_06805 4fd4651512ce1d0de726f022df150d46 282 Gene3D G3DSA:3.30.230.10 1 160 7.0E-55 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_06805 4fd4651512ce1d0de726f022df150d46 282 Gene3D G3DSA:3.30.70.890 161 279 1.8E-28 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMS64_06805 4fd4651512ce1d0de726f022df150d46 282 SUPERFAMILY SSF55060 161 277 4.8E-34 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMS64_06805 4fd4651512ce1d0de726f022df150d46 282 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 279 5.3E-95 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AMS64_06805 4fd4651512ce1d0de726f022df150d46 282 PIRSF PIRSF010376 2 278 5.5E-85 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AMS64_06805 4fd4651512ce1d0de726f022df150d46 282 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 271 32.852 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AMS64_06805 4fd4651512ce1d0de726f022df150d46 282 Pfam PF08544 GHMP kinases C terminal 208 257 5.2E-5 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AMS64_06805 4fd4651512ce1d0de726f022df150d46 282 Pfam PF00288 GHMP kinases N terminal domain 87 144 2.0E-10 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMS64_06805 4fd4651512ce1d0de726f022df150d46 282 SUPERFAMILY SSF54211 4 158 1.52E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_07435 ab7d9d2ba12c0f869f82b322e18acf93 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 9.0E-70 T 11-10-2018 AMS64_07435 ab7d9d2ba12c0f869f82b322e18acf93 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 9.0E-70 T 11-10-2018 AMS64_07435 ab7d9d2ba12c0f869f82b322e18acf93 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 9.0E-70 T 11-10-2018 AMS64_07435 ab7d9d2ba12c0f869f82b322e18acf93 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 9.0E-70 T 11-10-2018 AMS64_07435 ab7d9d2ba12c0f869f82b322e18acf93 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 9.0E-70 T 11-10-2018 AMS64_07435 ab7d9d2ba12c0f869f82b322e18acf93 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 9.0E-70 T 11-10-2018 AMS64_07435 ab7d9d2ba12c0f869f82b322e18acf93 222 PIRSF PIRSF002764 1 222 1.9E-84 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AMS64_07435 ab7d9d2ba12c0f869f82b322e18acf93 222 Pfam PF03379 CcmB protein 6 219 8.3E-88 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07435 ab7d9d2ba12c0f869f82b322e18acf93 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 1.6E-88 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AMS64_04250 9a62ebdc6217b62fdd29ac2f046aa859 275 Gene3D G3DSA:3.30.420.10 106 254 5.5E-15 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_04250 9a62ebdc6217b62fdd29ac2f046aa859 275 Pfam PF13276 HTH-like domain 33 83 1.6E-8 T 11-10-2018 IPR025948 HTH-like domain AMS64_04250 9a62ebdc6217b62fdd29ac2f046aa859 275 SUPERFAMILY SSF53098 102 262 4.86E-42 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_04250 9a62ebdc6217b62fdd29ac2f046aa859 275 Pfam PF00665 Integrase core domain 108 223 1.1E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_09245 2198703b40bbda873c02ca291edeee08 282 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 18 282 1.7E-90 T 11-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AMS64_03185 27ca5380ca372febea1367fa146e7ba9 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 236 6.8E-13 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMS64_03185 27ca5380ca372febea1367fa146e7ba9 286 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 282 5.0E-116 T 11-10-2018 IPR022522 Flagellar motor stator, MotA AMS64_03185 27ca5380ca372febea1367fa146e7ba9 286 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 206 223 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site AMS64_04740 ff99857a7cbe5af04c7f2454ef16eb35 99 Pfam PF10795 Protein of unknown function (DUF2607) 11 90 2.0E-4 T 11-10-2018 IPR019731 Protein of unknown function DUF2607 AMS64_16445 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 Gene3D G3DSA:1.10.10.10 3 103 6.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_16445 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 SMART SM00418 16 94 3.7E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_16445 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 SUPERFAMILY SSF46785 7 98 4.96E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_16445 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 2.3E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_16445 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 2.3E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_16445 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 2.3E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_16445 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 Pfam PF01022 Bacterial regulatory protein, arsR family 23 69 4.6E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_10825 5a9090619a58087cf8791e0f60ab0961 530 Gene3D G3DSA:3.40.50.300 3 278 9.6E-57 T 11-10-2018 AMS64_10825 5a9090619a58087cf8791e0f60ab0961 530 SUPERFAMILY SSF52540 6 237 4.78E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10825 5a9090619a58087cf8791e0f60ab0961 530 Gene3D G3DSA:3.40.50.300 282 528 9.2E-57 T 11-10-2018 AMS64_10825 5a9090619a58087cf8791e0f60ab0961 530 Pfam PF00005 ABC transporter 336 467 4.4E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_10825 5a9090619a58087cf8791e0f60ab0961 530 SMART SM00382 26 238 2.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_10825 5a9090619a58087cf8791e0f60ab0961 530 SMART SM00382 344 512 7.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_10825 5a9090619a58087cf8791e0f60ab0961 530 Pfam PF00005 ABC transporter 18 184 1.9E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_10825 5a9090619a58087cf8791e0f60ab0961 530 Pfam PF12848 ABC transporter 224 309 5.4E-21 T 11-10-2018 IPR032781 ABC-transporter extension domain AMS64_10825 5a9090619a58087cf8791e0f60ab0961 530 SUPERFAMILY SSF52540 297 524 2.94E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_13375 d192fbe432eb5e8900f59a5e70f2b6ed 576 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 340 351 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AMS64_13375 d192fbe432eb5e8900f59a5e70f2b6ed 576 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 576 42.441 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AMS64_13375 d192fbe432eb5e8900f59a5e70f2b6ed 576 Pfam PF01268 Formate--tetrahydrofolate ligase 3 575 6.4E-238 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AMS64_13375 d192fbe432eb5e8900f59a5e70f2b6ed 576 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 102 112 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AMS64_13375 d192fbe432eb5e8900f59a5e70f2b6ed 576 Gene3D G3DSA:3.10.410.10 463 552 5.2E-29 T 11-10-2018 AMS64_13375 d192fbe432eb5e8900f59a5e70f2b6ed 576 SUPERFAMILY SSF52540 4 574 2.66E-213 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_13375 d192fbe432eb5e8900f59a5e70f2b6ed 576 Gene3D G3DSA:3.30.1510.10 128 259 3.6E-183 T 11-10-2018 AMS64_13375 d192fbe432eb5e8900f59a5e70f2b6ed 576 Gene3D G3DSA:3.40.50.300 6 458 3.6E-183 T 11-10-2018 AMS64_16305 675b2e81f073107a4817317201f6d05f 375 Gene3D G3DSA:3.30.70.360 179 292 4.0E-129 T 11-10-2018 AMS64_16305 675b2e81f073107a4817317201f6d05f 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMS64_16305 675b2e81f073107a4817317201f6d05f 375 Gene3D G3DSA:3.40.630.10 7 362 4.0E-129 T 11-10-2018 AMS64_16305 675b2e81f073107a4817317201f6d05f 375 SUPERFAMILY SSF55031 179 288 3.74E-29 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMS64_16305 675b2e81f073107a4817317201f6d05f 375 SUPERFAMILY SSF53187 2 374 4.19E-66 T 11-10-2018 AMS64_16305 675b2e81f073107a4817317201f6d05f 375 Pfam PF07687 Peptidase dimerisation domain 175 282 6.8E-25 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AMS64_16305 675b2e81f073107a4817317201f6d05f 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 1.7E-176 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AMS64_16305 675b2e81f073107a4817317201f6d05f 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 53.357 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AMS64_16305 675b2e81f073107a4817317201f6d05f 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 1.3E-43 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMS64_11790 e721d375ea005247502ecf951a63fbdb 309 Gene3D G3DSA:3.80.30.20 9 276 1.9E-17 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMS64_11790 e721d375ea005247502ecf951a63fbdb 309 Pfam PF16199 Radical_SAM C-terminal domain 208 283 2.8E-20 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 AMS64_11790 e721d375ea005247502ecf951a63fbdb 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 1.3E-127 T 11-10-2018 IPR005911 Protein YhcC-like GO:0051536 AMS64_11790 e721d375ea005247502ecf951a63fbdb 309 SUPERFAMILY SSF102114 13 262 2.62E-46 T 11-10-2018 AMS64_11790 e721d375ea005247502ecf951a63fbdb 309 SMART SM00729 23 247 1.7E-41 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMS64_11790 e721d375ea005247502ecf951a63fbdb 309 Pfam PF04055 Radical SAM superfamily 43 195 3.7E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_13840 da3a2db6d240aff43d04733d6d200a5e 292 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 40 280 6.3E-51 T 11-10-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 AMS64_13840 da3a2db6d240aff43d04733d6d200a5e 292 Pfam PF07201 HrpJ-like domain 59 222 1.2E-38 T 11-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 AMS64_13840 da3a2db6d240aff43d04733d6d200a5e 292 SUPERFAMILY SSF140591 73 268 7.85E-59 T 11-10-2018 AMS64_07715 da3a2db6d240aff43d04733d6d200a5e 292 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 40 280 6.3E-51 T 11-10-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 AMS64_07715 da3a2db6d240aff43d04733d6d200a5e 292 Pfam PF07201 HrpJ-like domain 59 222 1.2E-38 T 11-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 AMS64_07715 da3a2db6d240aff43d04733d6d200a5e 292 SUPERFAMILY SSF140591 73 268 7.85E-59 T 11-10-2018 AMS64_09505 60527c742e47169bc2c9933a728e9033 152 Pfam PF13185 GAF domain 34 144 2.0E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_09505 60527c742e47169bc2c9933a728e9033 152 SUPERFAMILY SSF55781 4 148 2.94E-42 T 11-10-2018 AMS64_09505 60527c742e47169bc2c9933a728e9033 152 Gene3D G3DSA:3.30.450.40 2 152 4.0E-67 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_09505 60527c742e47169bc2c9933a728e9033 152 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 91 108 - T 11-10-2018 IPR000614 Free Met sulfoxide reductase conserved site AMS64_06225 f7b865603c5ee30dc139b881051e2de8 160 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 6 160 22.079 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AMS64_06225 f7b865603c5ee30dc139b881051e2de8 160 Gene3D G3DSA:3.30.160.150 18 160 3.3E-36 T 11-10-2018 AMS64_06225 f7b865603c5ee30dc139b881051e2de8 160 Pfam PF04390 Lipopolysaccharide-assembly 44 155 1.8E-7 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AMS64_17115 4f1a3d9affef0e4aa44d3906ba314a5e 142 Pfam PF13508 Acetyltransferase (GNAT) domain 47 120 2.7E-15 T 11-10-2018 IPR000182 GNAT domain AMS64_17115 4f1a3d9affef0e4aa44d3906ba314a5e 142 SUPERFAMILY SSF55729 1 137 5.32E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_17115 4f1a3d9affef0e4aa44d3906ba314a5e 142 Gene3D G3DSA:3.40.630.30 1 138 7.3E-33 T 11-10-2018 AMS64_04625 3a99c36b2476f9d7a43c16c7a5dd51b3 388 Pfam PF02417 Chromate transporter 221 384 1.0E-32 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AMS64_04625 3a99c36b2476f9d7a43c16c7a5dd51b3 388 Pfam PF02417 Chromate transporter 8 171 1.6E-30 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AMS64_04625 3a99c36b2476f9d7a43c16c7a5dd51b3 388 TIGRFAM TIGR00937 2A51: chromate efflux transporter 13 378 4.3E-80 T 11-10-2018 IPR014047 Chromate transporter, long chain AMS64_04625 3a99c36b2476f9d7a43c16c7a5dd51b3 388 PIRSF PIRSF004810 1 388 9.1E-103 T 11-10-2018 IPR014047 Chromate transporter, long chain AMS64_22470 fde2862bb396d357e100958e19e306af 364 Gene3D G3DSA:3.30.1330.60 231 360 1.8E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_22470 fde2862bb396d357e100958e19e306af 364 Pfam PF00691 OmpA family 245 337 2.8E-21 T 11-10-2018 IPR006665 OmpA-like domain AMS64_22470 fde2862bb396d357e100958e19e306af 364 Gene3D G3DSA:2.40.160.20 12 230 4.7E-58 T 11-10-2018 AMS64_22470 fde2862bb396d357e100958e19e306af 364 PRINTS PR01022 Outer membrane protein A signature 335 348 1.1E-21 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_22470 fde2862bb396d357e100958e19e306af 364 PRINTS PR01022 Outer membrane protein A signature 302 321 1.1E-21 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_22470 fde2862bb396d357e100958e19e306af 364 PRINTS PR01022 Outer membrane protein A signature 120 136 1.1E-21 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_22470 fde2862bb396d357e100958e19e306af 364 PRINTS PR01022 Outer membrane protein A signature 234 249 1.1E-21 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_22470 fde2862bb396d357e100958e19e306af 364 PRINTS PR01022 Outer membrane protein A signature 263 282 1.1E-21 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_22470 fde2862bb396d357e100958e19e306af 364 SUPERFAMILY SSF56925 22 211 4.45E-34 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMS64_22470 fde2862bb396d357e100958e19e306af 364 Pfam PF01389 OmpA-like transmembrane domain 24 212 6.9E-42 T 11-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AMS64_22470 fde2862bb396d357e100958e19e306af 364 SUPERFAMILY SSF103088 233 356 1.83E-31 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_22470 fde2862bb396d357e100958e19e306af 364 ProSitePatterns PS01068 OmpA-like domain. 280 324 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMS64_22470 fde2862bb396d357e100958e19e306af 364 PRINTS PR01021 OMPA domain signature 278 293 6.5E-21 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_22470 fde2862bb396d357e100958e19e306af 364 PRINTS PR01021 OMPA domain signature 246 268 6.5E-21 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_22470 fde2862bb396d357e100958e19e306af 364 PRINTS PR01021 OMPA domain signature 293 309 6.5E-21 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 SMART SM01003 4 135 4.2E-75 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 Gene3D G3DSA:3.40.50.720 135 317 3.7E-159 T 11-10-2018 AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 507 2.3E-274 T 11-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 SUPERFAMILY SSF51735 136 316 4.24E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 424 507 7.6E-37 T 11-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 134 1.7E-49 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 SMART SM01002 144 310 7.5E-84 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 139 367 4.5E-75 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 SUPERFAMILY SSF52283 1 166 7.91E-55 T 11-10-2018 AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 168 193 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 Gene3D G3DSA:3.40.50.720 3 364 3.7E-159 T 11-10-2018 AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 PIRSF PIRSF000203 1 507 5.3E-268 T 11-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AMS64_22180 5f83bc75b832b4d489e1947d730afd2b 508 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 11-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 115 1.8E-43 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 SUPERFAMILY SSF51230 568 645 1.7E-20 T 11-10-2018 IPR011053 Single hybrid motif AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 326 1.7E-68 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 SUPERFAMILY SSF56059 120 331 2.3E-64 T 11-10-2018 AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 SMART SM00878 340 443 1.0E-42 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 SMART SM01209 119 297 0.0025 T 11-10-2018 AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 158 172 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 SUPERFAMILY SSF52440 3 118 9.35E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 Gene3D G3DSA:2.40.50.100 580 646 1.2E-23 T 11-10-2018 AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 Gene3D G3DSA:3.30.470.130 1 446 2.2E-183 T 11-10-2018 AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 SUPERFAMILY SSF51246 335 442 5.23E-29 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 Pfam PF02785 Biotin carboxylase C-terminal domain 340 442 5.4E-28 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 Pfam PF00364 Biotin-requiring enzyme 583 644 1.4E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMS64_10695 ea5c63de0d324ceadfceffa04e50c6c1 656 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 602 619 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMS64_16785 088f11d34f87bca34dd826a57875d630 193 PIRSF PIRSF022704 1 193 1.2E-68 T 11-10-2018 IPR015987 Uncharacterised conserved protein UCP022704 AMS64_16785 088f11d34f87bca34dd826a57875d630 193 Pfam PF07081 Protein of unknown function (DUF1349) 9 183 7.1E-67 T 11-10-2018 IPR009784 Protein of unknown function DUF1349 AMS64_16785 088f11d34f87bca34dd826a57875d630 193 SUPERFAMILY SSF49899 5 183 8.71E-35 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMS64_16785 088f11d34f87bca34dd826a57875d630 193 Gene3D G3DSA:2.60.120.200 3 193 8.1E-63 T 11-10-2018 AMS64_00090 e720fface3449081d1fde0b85d1022ee 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.4E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_00090 e720fface3449081d1fde0b85d1022ee 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.4E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_00090 e720fface3449081d1fde0b85d1022ee 321 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AMS64_00090 e720fface3449081d1fde0b85d1022ee 321 Pfam PF13377 Periplasmic binding protein-like domain 163 320 7.4E-37 T 11-10-2018 AMS64_00090 e720fface3449081d1fde0b85d1022ee 321 SUPERFAMILY SSF47413 1 54 3.38E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_00090 e720fface3449081d1fde0b85d1022ee 321 Gene3D G3DSA:3.40.50.2300 77 312 3.0E-47 T 11-10-2018 AMS64_00090 e720fface3449081d1fde0b85d1022ee 321 SUPERFAMILY SSF53822 74 314 6.09E-46 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_00090 e720fface3449081d1fde0b85d1022ee 321 Gene3D G3DSA:3.40.50.2300 155 314 3.0E-47 T 11-10-2018 AMS64_00090 e720fface3449081d1fde0b85d1022ee 321 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 1.7E-16 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_00090 e720fface3449081d1fde0b85d1022ee 321 SMART SM00354 1 72 7.5E-15 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_00090 e720fface3449081d1fde0b85d1022ee 321 Gene3D G3DSA:1.10.260.40 1 47 1.4E-17 T 11-10-2018 AMS64_09285 5817ccd620255fce1e7332675970efbe 238 Pfam PF13489 Methyltransferase domain 52 201 3.2E-26 T 11-10-2018 AMS64_09285 5817ccd620255fce1e7332675970efbe 238 Gene3D G3DSA:3.40.50.150 11 233 2.0E-78 T 11-10-2018 AMS64_09285 5817ccd620255fce1e7332675970efbe 238 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 7.9E-87 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AMS64_09285 5817ccd620255fce1e7332675970efbe 238 SUPERFAMILY SSF53335 13 235 7.1E-48 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_09285 5817ccd620255fce1e7332675970efbe 238 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.284 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 SUPERFAMILY SSF55973 233 382 1.41E-71 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 Gene3D G3DSA:3.30.300.10 10 270 2.8E-179 T 11-10-2018 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 SUPERFAMILY SSF55973 3 108 8.63E-49 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 Gene3D G3DSA:3.30.300.10 101 373 2.8E-179 T 11-10-2018 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 381 58.83 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 115 125 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 Pfam PF02772 S-adenosylmethionine synthetase, central domain 113 231 8.2E-43 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 Gene3D G3DSA:3.30.300.10 4 233 2.8E-179 T 11-10-2018 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 SUPERFAMILY SSF55973 110 232 9.81E-49 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 PIRSF PIRSF000497 1 382 6.5E-175 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 4.3E-70 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 100 1.5E-44 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMS64_17880 0b870f5ebd61c9bf26088769970825fa 383 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 380 6.2E-195 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMS64_14910 7d5b0dcdfe74fda3dba1418041ab57ae 482 Gene3D G3DSA:3.40.50.300 100 303 2.0E-9 T 11-10-2018 AMS64_14910 7d5b0dcdfe74fda3dba1418041ab57ae 482 Pfam PF13401 AAA domain 131 281 1.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_14910 7d5b0dcdfe74fda3dba1418041ab57ae 482 SUPERFAMILY SSF52540 129 262 1.89E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 153 300 4.5E-32 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 Gene3D G3DSA:3.40.50.1370 8 301 3.1E-116 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 302 1.8E-117 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 133 144 3.3E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 3.3E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 290 3.3E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 3.3E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 261 266 2.2E-36 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 78 87 2.2E-36 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 132 149 2.2E-36 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 283 297 2.2E-36 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 2.2E-36 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 223 232 2.2E-36 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 Gene3D G3DSA:3.40.50.1370 133 289 3.1E-116 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 146 1.5E-44 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 SUPERFAMILY SSF53671 4 304 6.22E-99 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMS64_22225 d3cb3c47fba7f181c0157619bd761196 306 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 304 37.678 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_08380 fe24078629fe5a8894e1bb234c992d32 421 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 417 1.4E-168 T 11-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AMS64_08380 fe24078629fe5a8894e1bb234c992d32 421 SUPERFAMILY SSF51905 1 420 1.76E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_08380 fe24078629fe5a8894e1bb234c992d32 421 PIRSF PIRSF000141 1 421 4.7E-133 T 11-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AMS64_08380 fe24078629fe5a8894e1bb234c992d32 421 Gene3D G3DSA:3.50.50.60 261 321 1.3E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_08380 fe24078629fe5a8894e1bb234c992d32 421 Gene3D G3DSA:3.50.50.60 1 105 3.4E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_08380 fe24078629fe5a8894e1bb234c992d32 421 Pfam PF00890 FAD binding domain 4 404 3.6E-43 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08855 2f0e59903e6a1a4a5c730b1bf258d99a 94 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 24.979 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AMS64_08855 2f0e59903e6a1a4a5c730b1bf258d99a 94 SUPERFAMILY SSF51182 1 93 2.07E-35 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_08855 2f0e59903e6a1a4a5c730b1bf258d99a 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 2.6E-34 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AMS64_08855 2f0e59903e6a1a4a5c730b1bf258d99a 94 Gene3D G3DSA:2.60.120.10 1 93 1.1E-35 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_06435 dfaaed98bc1d988904d7982c1008aaf7 487 Gene3D G3DSA:3.40.50.12780 2 377 5.3E-69 T 11-10-2018 AMS64_06435 dfaaed98bc1d988904d7982c1008aaf7 487 ProSitePatterns PS00455 Putative AMP-binding domain signature. 140 151 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMS64_06435 dfaaed98bc1d988904d7982c1008aaf7 487 Pfam PF00501 AMP-binding enzyme 9 377 3.5E-58 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMS64_06435 dfaaed98bc1d988904d7982c1008aaf7 487 Gene3D G3DSA:3.30.300.30 378 483 3.0E-6 T 11-10-2018 AMS64_06435 dfaaed98bc1d988904d7982c1008aaf7 487 SUPERFAMILY SSF56801 2 480 7.46E-89 T 11-10-2018 AMS64_19560 2581c3c59f718c45201f504ed52c8dcd 166 Gene3D G3DSA:1.10.287.680 1 53 2.9E-29 T 11-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily AMS64_19560 2581c3c59f718c45201f504ed52c8dcd 166 Gene3D G3DSA:1.10.3190.10 54 166 2.4E-28 T 11-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily AMS64_19560 2581c3c59f718c45201f504ed52c8dcd 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 4.0E-39 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AMS64_19560 2581c3c59f718c45201f504ed52c8dcd 166 SUPERFAMILY SSF116960 1 166 1.83E-57 T 11-10-2018 AMS64_19560 2581c3c59f718c45201f504ed52c8dcd 166 Pfam PF03887 YfbU domain 1 166 9.3E-63 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AMS64_14645 ca5c77a2ec335fa2d6cd6ea5d8286b6d 524 SUPERFAMILY SSF51735 388 517 9.7E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_14645 ca5c77a2ec335fa2d6cd6ea5d8286b6d 524 Pfam PF02254 TrkA-N domain 388 504 1.0E-18 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMS64_14645 ca5c77a2ec335fa2d6cd6ea5d8286b6d 524 Pfam PF00999 Sodium/hydrogen exchanger family 4 346 1.6E-37 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMS64_14645 ca5c77a2ec335fa2d6cd6ea5d8286b6d 524 Gene3D G3DSA:1.20.1530.20 3 359 6.1E-45 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMS64_14645 ca5c77a2ec335fa2d6cd6ea5d8286b6d 524 Gene3D G3DSA:3.40.50.720 380 523 2.3E-31 T 11-10-2018 AMS64_06500 a4fbe0b4578a8e5ba81ddb54d4e663a3 244 SUPERFAMILY SSF46548 106 229 5.76E-33 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_06500 a4fbe0b4578a8e5ba81ddb54d4e663a3 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 110 6.5E-37 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06500 a4fbe0b4578a8e5ba81ddb54d4e663a3 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_06500 a4fbe0b4578a8e5ba81ddb54d4e663a3 244 SUPERFAMILY SSF54292 4 105 8.38E-32 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMS64_06500 a4fbe0b4578a8e5ba81ddb54d4e663a3 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 9 228 4.2E-91 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06500 a4fbe0b4578a8e5ba81ddb54d4e663a3 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 8.5E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_06500 a4fbe0b4578a8e5ba81ddb54d4e663a3 244 Gene3D G3DSA:1.10.1060.10 106 244 4.9E-49 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_06500 a4fbe0b4578a8e5ba81ddb54d4e663a3 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 56 64 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMS64_06500 a4fbe0b4578a8e5ba81ddb54d4e663a3 244 Gene3D G3DSA:3.10.20.30 1 105 1.6E-37 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_22125 5652c6ea8d74264c89be25cf9bc5eddf 107 Pfam PF10761 Protein of unknown function (DUF2590) 7 105 2.5E-39 T 11-10-2018 IPR019697 Bacteriophage HP1, Orf28 AMS64_15515 5652c6ea8d74264c89be25cf9bc5eddf 107 Pfam PF10761 Protein of unknown function (DUF2590) 7 105 2.5E-39 T 11-10-2018 IPR019697 Bacteriophage HP1, Orf28 AMS64_21710 382caa558d73ac7d4ad94956eec68bed 92 Pfam PF04077 DsrH like protein 8 84 7.2E-19 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AMS64_21710 382caa558d73ac7d4ad94956eec68bed 92 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 90 3.2E-23 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AMS64_21710 382caa558d73ac7d4ad94956eec68bed 92 SUPERFAMILY SSF75169 1 90 1.02E-19 T 11-10-2018 IPR027396 DsrEFH-like AMS64_21710 382caa558d73ac7d4ad94956eec68bed 92 Gene3D G3DSA:3.40.1260.10 1 90 2.4E-20 T 11-10-2018 IPR027396 DsrEFH-like AMS64_20410 35846108dd8f1e3a23b4e39abd801eff 100 SMART SM01152 7 83 1.9E-37 T 11-10-2018 IPR003746 Protein of unknown function DUF167 AMS64_20410 35846108dd8f1e3a23b4e39abd801eff 100 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 4.6E-26 T 11-10-2018 IPR003746 Protein of unknown function DUF167 AMS64_20410 35846108dd8f1e3a23b4e39abd801eff 100 SUPERFAMILY SSF69786 2 97 7.72E-33 T 11-10-2018 IPR036591 YggU-like superfamily AMS64_20410 35846108dd8f1e3a23b4e39abd801eff 100 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 97 21.026 T 11-10-2018 IPR003746 Protein of unknown function DUF167 AMS64_20410 35846108dd8f1e3a23b4e39abd801eff 100 Gene3D G3DSA:3.30.1200.10 1 100 4.6E-36 T 11-10-2018 IPR036591 YggU-like superfamily AMS64_20410 35846108dd8f1e3a23b4e39abd801eff 100 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 6 90 3.0E-28 T 11-10-2018 IPR005228 Conserved hypothetical protein CHP00251 AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 11 221 6.5E-67 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 186 5.7E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 191 1.8E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 SUPERFAMILY SSF56784 8 221 8.01E-63 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 Gene3D G3DSA:3.40.50.1000 11 214 6.7E-65 T 11-10-2018 IPR023214 HAD superfamily AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 1.1E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 1.1E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 1.1E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 1.1E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 9.5E-37 T 11-10-2018 AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 93 191 1.7E-12 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 Gene3D G3DSA:1.10.150.240 23 91 6.7E-65 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMS64_06620 d9d6de37d45c484736f8d15732cfb33d 222 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 8 222 34.628 T 11-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AMS64_15460 6bf1a525eb4e78d36daf6b8a687acc08 345 SUPERFAMILY SSF55326 7 170 2.54E-53 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMS64_15460 6bf1a525eb4e78d36daf6b8a687acc08 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 47.033 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_15460 6bf1a525eb4e78d36daf6b8a687acc08 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 1.1E-15 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AMS64_15460 6bf1a525eb4e78d36daf6b8a687acc08 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 340 4.3E-38 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AMS64_15460 6bf1a525eb4e78d36daf6b8a687acc08 345 SUPERFAMILY SSF56042 171 342 1.64E-62 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMS64_15460 6bf1a525eb4e78d36daf6b8a687acc08 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 2.3E-149 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMS64_15460 6bf1a525eb4e78d36daf6b8a687acc08 345 Gene3D G3DSA:3.30.1330.10 6 170 6.2E-68 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMS64_15460 6bf1a525eb4e78d36daf6b8a687acc08 345 Gene3D G3DSA:3.90.650.10 171 345 5.4E-71 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMS64_14930 32a61f0f319536fcda9bebff429b215e 1101 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 89 748 1.8E-139 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AMS64_14930 32a61f0f319536fcda9bebff429b215e 1101 Gene3D G3DSA:3.40.50.300 511 753 2.1E-32 T 11-10-2018 AMS64_14930 32a61f0f319536fcda9bebff429b215e 1101 SUPERFAMILY SSF52540 347 733 1.15E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_14930 32a61f0f319536fcda9bebff429b215e 1101 Pfam PF04851 Type III restriction enzyme, res subunit 318 488 6.9E-20 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMS64_14930 32a61f0f319536fcda9bebff429b215e 1101 SUPERFAMILY SSF52540 282 546 1.0E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_14930 32a61f0f319536fcda9bebff429b215e 1101 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 7 229 7.2E-40 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AMS64_14930 32a61f0f319536fcda9bebff429b215e 1101 SMART SM00487 315 519 3.4E-10 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_14930 32a61f0f319536fcda9bebff429b215e 1101 Gene3D G3DSA:3.40.50.300 318 507 5.9E-48 T 11-10-2018 AMS64_14930 32a61f0f319536fcda9bebff429b215e 1101 Gene3D G3DSA:3.90.1570.50 114 315 2.2E-15 T 11-10-2018 AMS64_08515 e4045499ff1f1c439f923f3d72195e28 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.7E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08515 e4045499ff1f1c439f923f3d72195e28 301 SUPERFAMILY SSF53850 89 295 3.98E-44 T 11-10-2018 AMS64_08515 e4045499ff1f1c439f923f3d72195e28 301 Pfam PF03466 LysR substrate binding domain 88 292 8.7E-51 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_08515 e4045499ff1f1c439f923f3d72195e28 301 Gene3D G3DSA:3.40.190.290 92 298 1.5E-41 T 11-10-2018 AMS64_08515 e4045499ff1f1c439f923f3d72195e28 301 SUPERFAMILY SSF46785 3 112 1.36E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_08515 e4045499ff1f1c439f923f3d72195e28 301 Gene3D G3DSA:1.10.10.10 2 89 1.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_11045 4e656020ae3f680a8165e58de52f7282 315 Pfam PF01544 CorA-like Mg2+ transporter protein 26 311 5.5E-57 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMS64_11045 4e656020ae3f680a8165e58de52f7282 315 Gene3D G3DSA:1.20.58.340 239 315 6.9E-26 T 11-10-2018 AMS64_11045 4e656020ae3f680a8165e58de52f7282 315 SUPERFAMILY SSF144083 250 313 2.35E-20 T 11-10-2018 AMS64_11045 4e656020ae3f680a8165e58de52f7282 315 SUPERFAMILY SSF143865 1 254 1.7E-27 T 11-10-2018 AMS64_11045 4e656020ae3f680a8165e58de52f7282 315 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 25 315 4.1E-62 T 11-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 AMS64_13745 e18b57959b1b7fef71c7d0bce0a1615f 434 Gene3D G3DSA:3.30.70.1770 289 352 5.5E-18 T 11-10-2018 AMS64_13745 e18b57959b1b7fef71c7d0bce0a1615f 434 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 6 98 5.4E-19 T 11-10-2018 IPR032030 YscD, cytoplasmic domain AMS64_13745 e18b57959b1b7fef71c7d0bce0a1615f 434 Gene3D G3DSA:2.60.200.20 1 117 3.5E-18 T 11-10-2018 AMS64_13745 e18b57959b1b7fef71c7d0bce0a1615f 434 SUPERFAMILY SSF49879 10 94 9.23E-8 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AMS64_13745 e18b57959b1b7fef71c7d0bce0a1615f 434 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 3 417 4.4E-85 T 11-10-2018 IPR012843 Type III secretion system YscD/HrpQ AMS64_13745 e18b57959b1b7fef71c7d0bce0a1615f 434 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 165 417 1.4E-99 T 11-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain AMS64_07810 e18b57959b1b7fef71c7d0bce0a1615f 434 Gene3D G3DSA:3.30.70.1770 289 352 5.5E-18 T 11-10-2018 AMS64_07810 e18b57959b1b7fef71c7d0bce0a1615f 434 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 6 98 5.4E-19 T 11-10-2018 IPR032030 YscD, cytoplasmic domain AMS64_07810 e18b57959b1b7fef71c7d0bce0a1615f 434 Gene3D G3DSA:2.60.200.20 1 117 3.5E-18 T 11-10-2018 AMS64_07810 e18b57959b1b7fef71c7d0bce0a1615f 434 SUPERFAMILY SSF49879 10 94 9.23E-8 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AMS64_07810 e18b57959b1b7fef71c7d0bce0a1615f 434 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 3 417 4.4E-85 T 11-10-2018 IPR012843 Type III secretion system YscD/HrpQ AMS64_07810 e18b57959b1b7fef71c7d0bce0a1615f 434 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 165 417 1.4E-99 T 11-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 30.97 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 Gene3D G3DSA:1.10.150.20 67 143 3.5E-26 T 11-10-2018 AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.2E-14 T 11-10-2018 AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 5.0E-66 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 Gene3D G3DSA:1.10.8.10 158 204 3.1E-20 T 11-10-2018 AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 SUPERFAMILY SSF46929 159 203 1.57E-11 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 SUPERFAMILY SSF50249 2 63 2.46E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 SUPERFAMILY SSF47781 66 137 1.56E-20 T 11-10-2018 IPR010994 RuvA domain 2-like AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 Pfam PF01330 RuvA N terminal domain 2 62 6.2E-21 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 Pfam PF07499 RuvA, C-terminal domain 159 203 4.6E-16 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 SMART SM00278 73 92 1.3 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 SMART SM00278 108 127 0.051 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMS64_04455 251d91a74178cdca57c0d0c637fac9ae 204 Gene3D G3DSA:2.40.50.140 1 66 4.1E-28 T 11-10-2018 AMS64_20935 d157ed6f94f80c11df07516a5be16d0d 529 Pfam PF07012 Curlin associated repeat 230 263 9.9E-5 T 11-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AMS64_20935 d157ed6f94f80c11df07516a5be16d0d 529 Pfam PF07012 Curlin associated repeat 449 478 6.6E-5 T 11-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AMS64_20935 d157ed6f94f80c11df07516a5be16d0d 529 Pfam PF07012 Curlin associated repeat 391 433 5.6E-5 T 11-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AMS64_20935 d157ed6f94f80c11df07516a5be16d0d 529 Pfam PF07012 Curlin associated repeat 194 241 1.4E-4 T 11-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AMS64_21685 f4893b8c11d5188390ebbebeebdd2a80 180 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 3 172 4.3E-77 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AMS64_21685 f4893b8c11d5188390ebbebeebdd2a80 180 PIRSF PIRSF004682 1 180 2.4E-66 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AMS64_21685 f4893b8c11d5188390ebbebeebdd2a80 180 SUPERFAMILY SSF56784 4 172 1.22E-49 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_21685 f4893b8c11d5188390ebbebeebdd2a80 180 Pfam PF13242 HAD-hyrolase-like 102 157 1.2E-11 T 11-10-2018 AMS64_21685 f4893b8c11d5188390ebbebeebdd2a80 180 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 144 8.2E-44 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AMS64_21685 f4893b8c11d5188390ebbebeebdd2a80 180 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 143 5.9E-40 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AMS64_21685 f4893b8c11d5188390ebbebeebdd2a80 180 Gene3D G3DSA:3.40.50.1000 2 178 1.5E-59 T 11-10-2018 IPR023214 HAD superfamily AMS64_07245 68fc0deb7c27565fe3688c2eb92d8c76 139 Pfam PF13673 Acetyltransferase (GNAT) domain 38 124 2.8E-18 T 11-10-2018 IPR000182 GNAT domain AMS64_07245 68fc0deb7c27565fe3688c2eb92d8c76 139 SUPERFAMILY SSF55729 1 133 1.24E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_07245 68fc0deb7c27565fe3688c2eb92d8c76 139 Gene3D G3DSA:3.40.630.30 1 136 3.6E-27 T 11-10-2018 AMS64_09990 88efa86d0f1d6c81d1d9952f04f90491 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.168 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 AMS64_09990 88efa86d0f1d6c81d1d9952f04f90491 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 7.9E-189 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 AMS64_09990 88efa86d0f1d6c81d1d9952f04f90491 423 SUPERFAMILY SSF53300 252 419 2.43E-5 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_08880 c1abbb4bcee3e31f2c22e04c9e442dff 258 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 256 41.522 T 11-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 AMS64_08880 c1abbb4bcee3e31f2c22e04c9e442dff 258 Pfam PF13847 Methyltransferase domain 46 148 2.0E-14 T 11-10-2018 IPR025714 Methyltransferase domain AMS64_08880 c1abbb4bcee3e31f2c22e04c9e442dff 258 Gene3D G3DSA:3.40.50.150 10 258 1.7E-67 T 11-10-2018 AMS64_08880 c1abbb4bcee3e31f2c22e04c9e442dff 258 SUPERFAMILY SSF53335 4 256 2.74E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_03215 a4ee24bcbf344a8346388b19acd43546 104 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 92 2.1E-18 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AMS64_03215 a4ee24bcbf344a8346388b19acd43546 104 Pfam PF04999 Cell division protein FtsL 8 102 5.0E-29 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AMS64_03215 a4ee24bcbf344a8346388b19acd43546 104 Hamap MF_00910 Cell division protein FtsL [ftsL]. 18 101 14.29 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AMS64_00070 2ecaf81a4492bc98bf7939e9f5a6db3d 112 Gene3D G3DSA:2.40.50.140 2 112 3.9E-34 T 11-10-2018 AMS64_00070 2ecaf81a4492bc98bf7939e9f5a6db3d 112 SUPERFAMILY SSF50249 5 111 4.41E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_00070 2ecaf81a4492bc98bf7939e9f5a6db3d 112 Pfam PF01588 Putative tRNA binding domain 15 109 1.2E-28 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AMS64_00235 54a93130c5749cbdf7be98d02399b3f3 287 SMART SM00267 124 287 2.0E-12 T 11-10-2018 IPR000160 GGDEF domain AMS64_00235 54a93130c5749cbdf7be98d02399b3f3 287 Gene3D G3DSA:3.30.450.20 18 122 1.5E-13 T 11-10-2018 AMS64_00235 54a93130c5749cbdf7be98d02399b3f3 287 Gene3D G3DSA:3.30.70.270 123 286 7.4E-29 T 11-10-2018 AMS64_00235 54a93130c5749cbdf7be98d02399b3f3 287 SUPERFAMILY SSF55785 25 118 1.12E-7 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_00235 54a93130c5749cbdf7be98d02399b3f3 287 Pfam PF08447 PAS fold 43 110 1.8E-9 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AMS64_00235 54a93130c5749cbdf7be98d02399b3f3 287 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 134 268 1.4E-19 T 11-10-2018 IPR000160 GGDEF domain AMS64_00235 54a93130c5749cbdf7be98d02399b3f3 287 SUPERFAMILY SSF55073 140 283 5.81E-22 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_00235 54a93130c5749cbdf7be98d02399b3f3 287 Pfam PF00990 Diguanylate cyclase, GGDEF domain 137 282 4.0E-21 T 11-10-2018 IPR000160 GGDEF domain AMS64_20830 260f462a821f3f0b6420cfb137b26219 428 Gene3D G3DSA:3.90.1150.10 7 418 1.1E-180 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_20830 260f462a821f3f0b6420cfb137b26219 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_20830 260f462a821f3f0b6420cfb137b26219 428 Pfam PF00202 Aminotransferase class-III 33 395 4.9E-78 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_20830 260f462a821f3f0b6420cfb137b26219 428 SUPERFAMILY SSF53383 2 425 3.03E-140 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_20830 260f462a821f3f0b6420cfb137b26219 428 Gene3D G3DSA:3.40.640.10 69 317 1.1E-180 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_20830 260f462a821f3f0b6420cfb137b26219 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 4.2E-195 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AMS64_20830 260f462a821f3f0b6420cfb137b26219 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 106.002 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AMS64_03130 75612058e94507334e5ea59082d0f2ec 447 SUPERFAMILY SSF64518 160 447 5.49E-23 T 11-10-2018 AMS64_03130 75612058e94507334e5ea59082d0f2ec 447 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 383 446 2.5E-10 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMS64_03130 75612058e94507334e5ea59082d0f2ec 447 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 446 8.4E-96 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMS64_03130 75612058e94507334e5ea59082d0f2ec 447 PRINTS PR01005 Flagellar hook-associated protein signature 211 229 2.1E-18 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMS64_03130 75612058e94507334e5ea59082d0f2ec 447 PRINTS PR01005 Flagellar hook-associated protein signature 120 140 2.1E-18 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMS64_03130 75612058e94507334e5ea59082d0f2ec 447 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 2.1E-18 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMS64_03130 75612058e94507334e5ea59082d0f2ec 447 PRINTS PR01005 Flagellar hook-associated protein signature 153 177 2.1E-18 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMS64_03130 75612058e94507334e5ea59082d0f2ec 447 Pfam PF00460 Flagella basal body rod protein 4 33 1.6E-6 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 Gene3D G3DSA:3.40.50.80 258 397 1.5E-32 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 Gene3D G3DSA:1.10.490.10 1 145 5.2E-52 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 Hamap MF_01252 Flavohemoprotein [hmp]. 1 397 56.458 T 11-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 PRINTS PR00410 Phenol hydroxylase reductase family signature 359 367 1.1E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 PRINTS PR00410 Phenol hydroxylase reductase family signature 249 258 1.1E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 PRINTS PR00410 Phenol hydroxylase reductase family signature 265 284 1.1E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 1.1E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 SUPERFAMILY SSF46458 2 143 1.46E-39 T 11-10-2018 IPR009050 Globin-like superfamily AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 Gene3D G3DSA:2.40.30.10 151 256 4.1E-36 T 11-10-2018 AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 Pfam PF00970 Oxidoreductase FAD-binding domain 159 255 1.6E-10 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 Pfam PF00175 Oxidoreductase NAD-binding domain 266 373 2.4E-15 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 SUPERFAMILY SSF63380 150 255 3.4E-29 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 SUPERFAMILY SSF52343 258 394 8.64E-37 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_20300 cfd31a1071ddf633dd45864c73780e44 397 Pfam PF00042 Globin 7 102 9.1E-12 T 11-10-2018 IPR000971 Globin GO:0020037 AMS64_00140 e46ea09b7d8a1dcd39c7ec493aee31c0 267 Pfam PF01177 Asp/Glu/Hydantoin racemase 4 213 8.9E-30 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMS64_00140 e46ea09b7d8a1dcd39c7ec493aee31c0 267 Gene3D G3DSA:3.40.50.1860 6 222 1.2E-83 T 11-10-2018 AMS64_00140 e46ea09b7d8a1dcd39c7ec493aee31c0 267 SUPERFAMILY SSF53681 3 105 9.48E-31 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMS64_00140 e46ea09b7d8a1dcd39c7ec493aee31c0 267 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMS64_00140 e46ea09b7d8a1dcd39c7ec493aee31c0 267 Hamap MF_00258 Glutamate racemase [murI]. 2 261 31.965 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMS64_00140 e46ea09b7d8a1dcd39c7ec493aee31c0 267 TIGRFAM TIGR00067 glut_race: glutamate racemase 4 223 3.8E-66 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMS64_00140 e46ea09b7d8a1dcd39c7ec493aee31c0 267 SUPERFAMILY SSF53681 107 254 2.35E-30 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMS64_00140 e46ea09b7d8a1dcd39c7ec493aee31c0 267 Gene3D G3DSA:3.40.50.1860 94 206 1.2E-83 T 11-10-2018 AMS64_00140 e46ea09b7d8a1dcd39c7ec493aee31c0 267 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 69 77 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMS64_09825 825dd88a9e881d210409b81e8ebef6e1 339 PIRSF PIRSF002465 2 338 2.9E-121 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AMS64_09825 825dd88a9e881d210409b81e8ebef6e1 339 Pfam PF02504 Fatty acid synthesis protein 5 322 1.7E-103 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AMS64_09825 825dd88a9e881d210409b81e8ebef6e1 339 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 338 139.119 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AMS64_09825 825dd88a9e881d210409b81e8ebef6e1 339 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 333 3.4E-108 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AMS64_09825 825dd88a9e881d210409b81e8ebef6e1 339 SUPERFAMILY SSF53659 5 334 2.59E-102 T 11-10-2018 AMS64_09825 825dd88a9e881d210409b81e8ebef6e1 339 Gene3D G3DSA:3.40.718.10 3 338 4.0E-123 T 11-10-2018 AMS64_00900 5f4a007a4c9af17b5bb102db35f2337f 115 Pfam PF01042 Endoribonuclease L-PSP 4 114 3.0E-21 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMS64_00900 5f4a007a4c9af17b5bb102db35f2337f 115 Gene3D G3DSA:3.30.1330.40 1 115 5.9E-34 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_00900 5f4a007a4c9af17b5bb102db35f2337f 115 SUPERFAMILY SSF55298 2 114 7.07E-28 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_20305 6e85e07436d6c5da91aafb607768ecc8 203 SMART SM00671 103 138 0.0044 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_20305 6e85e07436d6c5da91aafb607768ecc8 203 SMART SM00671 67 102 0.16 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_20305 6e85e07436d6c5da91aafb607768ecc8 203 Gene3D G3DSA:1.25.40.10 27 203 1.5E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_20305 6e85e07436d6c5da91aafb607768ecc8 203 SUPERFAMILY SSF81901 65 197 1.1E-17 T 11-10-2018 AMS64_21925 3989071c64244be99f9502afe615f261 134 SUPERFAMILY SSF54631 1 128 1.39E-26 T 11-10-2018 AMS64_21925 3989071c64244be99f9502afe615f261 134 Gene3D G3DSA:3.10.580.10 1 133 3.1E-25 T 11-10-2018 AMS64_21925 3989071c64244be99f9502afe615f261 134 Pfam PF00571 CBS domain 71 124 5.7E-11 T 11-10-2018 IPR000644 CBS domain AMS64_21925 3989071c64244be99f9502afe615f261 134 Pfam PF00571 CBS domain 19 55 4.1E-4 T 11-10-2018 IPR000644 CBS domain AMS64_21925 3989071c64244be99f9502afe615f261 134 SMART SM00116 11 59 1.4 T 11-10-2018 IPR000644 CBS domain AMS64_21925 3989071c64244be99f9502afe615f261 134 SMART SM00116 78 125 0.21 T 11-10-2018 IPR000644 CBS domain AMS64_21295 c87f73fd18e7c2770b1998ccf43cc78f 224 Gene3D G3DSA:3.90.1490.10 147 221 4.0E-6 T 11-10-2018 AMS64_21295 c87f73fd18e7c2770b1998ccf43cc78f 224 Gene3D G3DSA:3.40.50.620 1 146 1.8E-26 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_21295 c87f73fd18e7c2770b1998ccf43cc78f 224 SUPERFAMILY SSF52402 1 220 1.71E-61 T 11-10-2018 AMS64_21295 c87f73fd18e7c2770b1998ccf43cc78f 224 Pfam PF01902 Diphthamide synthase 5 204 4.2E-26 T 11-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 AMS64_03935 c96f7a860438b322ebf71bab8849c385 321 Pfam PF01544 CorA-like Mg2+ transporter protein 35 316 1.5E-59 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMS64_03935 c96f7a860438b322ebf71bab8849c385 321 SUPERFAMILY SSF144083 257 318 1.31E-13 T 11-10-2018 AMS64_03935 c96f7a860438b322ebf71bab8849c385 321 Gene3D G3DSA:1.20.58.340 135 256 6.7E-37 T 11-10-2018 AMS64_03935 c96f7a860438b322ebf71bab8849c385 321 SUPERFAMILY SSF143865 8 253 6.93E-51 T 11-10-2018 AMS64_03935 c96f7a860438b322ebf71bab8849c385 321 Gene3D G3DSA:1.20.58.340 264 321 1.0E-11 T 11-10-2018 AMS64_03935 c96f7a860438b322ebf71bab8849c385 321 Gene3D G3DSA:3.30.460.20 4 133 3.9E-36 T 11-10-2018 AMS64_22590 49e17626e7ae8c51af2581d96822ffce 216 SUPERFAMILY SSF46785 139 206 2.45E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_22590 49e17626e7ae8c51af2581d96822ffce 216 Gene3D G3DSA:3.90.79.10 4 136 3.0E-23 T 11-10-2018 AMS64_22590 49e17626e7ae8c51af2581d96822ffce 216 SUPERFAMILY SSF55811 5 131 1.09E-18 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_22590 49e17626e7ae8c51af2581d96822ffce 216 Gene3D G3DSA:1.10.10.10 137 212 1.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_08945 cb3e963190f09cf31e0cb75a84fb1db7 405 SUPERFAMILY SSF53187 11 395 5.28E-53 T 11-10-2018 AMS64_08945 cb3e963190f09cf31e0cb75a84fb1db7 405 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMS64_08945 cb3e963190f09cf31e0cb75a84fb1db7 405 Pfam PF07687 Peptidase dimerisation domain 183 283 1.1E-16 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AMS64_08945 cb3e963190f09cf31e0cb75a84fb1db7 405 Gene3D G3DSA:3.30.70.360 186 300 1.3E-64 T 11-10-2018 AMS64_08945 cb3e963190f09cf31e0cb75a84fb1db7 405 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 7 400 1.5E-227 T 11-10-2018 IPR017706 Peptidase M20/DapE, YgeY AMS64_08945 cb3e963190f09cf31e0cb75a84fb1db7 405 Gene3D G3DSA:3.40.630.10 25 388 1.3E-64 T 11-10-2018 AMS64_08945 cb3e963190f09cf31e0cb75a84fb1db7 405 Pfam PF01546 Peptidase family M20/M25/M40 78 393 2.9E-24 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMS64_08945 cb3e963190f09cf31e0cb75a84fb1db7 405 SUPERFAMILY SSF55031 186 283 4.93E-13 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMS64_01455 0a76e2056c7a487c791e94bbaeadbecf 166 Gene3D G3DSA:1.20.120.450 2 161 2.2E-46 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMS64_01455 0a76e2056c7a487c791e94bbaeadbecf 166 SUPERFAMILY SSF109854 7 162 2.11E-48 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMS64_01455 0a76e2056c7a487c791e94bbaeadbecf 166 Pfam PF09351 Domain of unknown function (DUF1993) 5 160 2.8E-53 T 11-10-2018 IPR018531 Protein of unknown function DUF1993 AMS64_00205 90ca6ebee4c8c8de75a512a8a7c2797a 145 PIRSF PIRSF006276 1 145 2.1E-52 T 11-10-2018 IPR006015 Universal stress protein A AMS64_00205 90ca6ebee4c8c8de75a512a8a7c2797a 145 Gene3D G3DSA:3.40.50.620 6 145 2.0E-46 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_00205 90ca6ebee4c8c8de75a512a8a7c2797a 145 SUPERFAMILY SSF52402 7 142 7.87E-32 T 11-10-2018 AMS64_00205 90ca6ebee4c8c8de75a512a8a7c2797a 145 Pfam PF00582 Universal stress protein family 7 142 1.8E-20 T 11-10-2018 IPR006016 UspA AMS64_21770 110a32359cd9c0647e1fb1101d536db7 123 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMS64_21770 110a32359cd9c0647e1fb1101d536db7 123 Gene3D G3DSA:1.20.5.1030 64 121 4.3E-17 T 11-10-2018 IPR038379 SecE superfamily AMS64_21770 110a32359cd9c0647e1fb1101d536db7 123 Hamap MF_00422 Protein translocase subunit SecE [secE]. 65 119 13.104 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMS64_21770 110a32359cd9c0647e1fb1101d536db7 123 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 68 121 1.1E-18 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMS64_21770 110a32359cd9c0647e1fb1101d536db7 123 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 68 120 2.5E-20 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMS64_21770 110a32359cd9c0647e1fb1101d536db7 123 PRINTS PR01650 Bacterial translocase SecE signature 42 63 1.0E-30 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMS64_21770 110a32359cd9c0647e1fb1101d536db7 123 PRINTS PR01650 Bacterial translocase SecE signature 63 83 1.0E-30 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMS64_21770 110a32359cd9c0647e1fb1101d536db7 123 PRINTS PR01650 Bacterial translocase SecE signature 107 123 1.0E-30 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMS64_21770 110a32359cd9c0647e1fb1101d536db7 123 PRINTS PR01650 Bacterial translocase SecE signature 87 107 1.0E-30 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMS64_10410 37d4cb8f59e2a3e30879983ed7438ed3 251 Gene3D G3DSA:2.160.10.10 86 247 1.3E-32 T 11-10-2018 AMS64_10410 37d4cb8f59e2a3e30879983ed7438ed3 251 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 183 216 2.4E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_10410 37d4cb8f59e2a3e30879983ed7438ed3 251 SUPERFAMILY SSF51161 86 239 6.24E-31 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_10410 37d4cb8f59e2a3e30879983ed7438ed3 251 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 190 218 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMS64_00360 3a76d039f4845f9d0ebf3d28817ab419 227 Gene3D G3DSA:3.40.50.2300 1 129 8.3E-33 T 11-10-2018 AMS64_00360 3a76d039f4845f9d0ebf3d28817ab419 227 SMART SM00448 2 112 2.6E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_00360 3a76d039f4845f9d0ebf3d28817ab419 227 SUPERFAMILY SSF46894 135 224 3.4E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_00360 3a76d039f4845f9d0ebf3d28817ab419 227 Gene3D G3DSA:1.10.10.10 130 227 1.3E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_00360 3a76d039f4845f9d0ebf3d28817ab419 227 SUPERFAMILY SSF52172 1 169 6.97E-37 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_00360 3a76d039f4845f9d0ebf3d28817ab419 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 1.2E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_00360 3a76d039f4845f9d0ebf3d28817ab419 227 SMART SM00862 148 224 1.7E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_00360 3a76d039f4845f9d0ebf3d28817ab419 227 Pfam PF00072 Response regulator receiver domain 4 113 2.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_09900 52b3a04b767139546f39b0d0cc6ad2b5 466 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 462 49.996 T 11-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 AMS64_09900 52b3a04b767139546f39b0d0cc6ad2b5 466 SMART SM00490 258 339 3.7E-29 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_09900 52b3a04b767139546f39b0d0cc6ad2b5 466 Pfam PF00271 Helicase conserved C-terminal domain 231 339 4.0E-26 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_09900 52b3a04b767139546f39b0d0cc6ad2b5 466 Gene3D G3DSA:3.40.50.300 1 210 4.1E-75 T 11-10-2018 AMS64_09900 52b3a04b767139546f39b0d0cc6ad2b5 466 Gene3D G3DSA:3.40.50.300 214 403 2.8E-46 T 11-10-2018 AMS64_09900 52b3a04b767139546f39b0d0cc6ad2b5 466 Pfam PF00270 DEAD/DEAH box helicase 26 195 2.2E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_09900 52b3a04b767139546f39b0d0cc6ad2b5 466 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMS64_09900 52b3a04b767139546f39b0d0cc6ad2b5 466 SUPERFAMILY SSF52540 74 360 4.91E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09900 52b3a04b767139546f39b0d0cc6ad2b5 466 SMART SM00487 20 222 1.9E-60 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_06300 27edd324840e31c66732787108746320 294 Gene3D G3DSA:3.30.465.10 196 282 7.5E-29 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMS64_06300 27edd324840e31c66732787108746320 294 SMART SM00116 74 123 6.1 T 11-10-2018 IPR000644 CBS domain AMS64_06300 27edd324840e31c66732787108746320 294 SMART SM00116 140 188 0.028 T 11-10-2018 IPR000644 CBS domain AMS64_06300 27edd324840e31c66732787108746320 294 SMART SM01091 206 284 3.2E-28 T 11-10-2018 IPR005170 Transporter-associated domain AMS64_06300 27edd324840e31c66732787108746320 294 SUPERFAMILY SSF54631 62 201 1.01E-33 T 11-10-2018 AMS64_06300 27edd324840e31c66732787108746320 294 Pfam PF00571 CBS domain 139 188 3.4E-6 T 11-10-2018 IPR000644 CBS domain AMS64_06300 27edd324840e31c66732787108746320 294 Pfam PF00571 CBS domain 65 119 8.9E-7 T 11-10-2018 IPR000644 CBS domain AMS64_06300 27edd324840e31c66732787108746320 294 Gene3D G3DSA:3.10.580.10 47 195 1.4E-53 T 11-10-2018 AMS64_06300 27edd324840e31c66732787108746320 294 Pfam PF03471 Transporter associated domain 207 282 1.4E-20 T 11-10-2018 IPR005170 Transporter-associated domain AMS64_06300 27edd324840e31c66732787108746320 294 SUPERFAMILY SSF56176 204 288 2.45E-22 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMS64_14495 85c46ead185c6ac1295f5c0cc514fc0f 134 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 5 122 20.628 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AMS64_14495 85c46ead185c6ac1295f5c0cc514fc0f 134 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 121 4.1E-34 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14495 85c46ead185c6ac1295f5c0cc514fc0f 134 Gene3D G3DSA:1.20.58.1610 1 122 3.2E-42 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_02750 010c4e47ac323c595033ccf1881c876a 260 SUPERFAMILY SSF52317 34 256 3.19E-39 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_02750 010c4e47ac323c595033ccf1881c876a 260 Gene3D G3DSA:3.40.50.880 9 257 1.4E-64 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_02750 010c4e47ac323c595033ccf1881c876a 260 Pfam PF07722 Peptidase C26 12 230 4.5E-66 T 11-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 SMART SM00919 271 530 1.9E-134 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 Gene3D G3DSA:3.40.50.720 269 564 1.5E-106 T 11-10-2018 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 SMART SM01274 81 261 9.3E-108 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 SUPERFAMILY SSF53223 7 270 1.15E-111 T 11-10-2018 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 Gene3D G3DSA:3.40.50.10380 17 268 9.6E-117 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 Pfam PF03949 Malic enzyme, NAD binding domain 271 529 3.8E-98 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 SUPERFAMILY SSF51735 271 561 1.71E-92 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 3.5E-79 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 PIRSF PIRSF000106 2 562 1.0E-228 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 564 70.938 T 11-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 PRINTS PR00072 Malic enzyme signature 298 314 7.4E-75 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 PRINTS PR00072 Malic enzyme signature 87 111 7.4E-75 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 PRINTS PR00072 Malic enzyme signature 242 260 7.4E-75 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 PRINTS PR00072 Malic enzyme signature 407 423 7.4E-75 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 PRINTS PR00072 Malic enzyme signature 147 176 7.4E-75 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 PRINTS PR00072 Malic enzyme signature 267 283 7.4E-75 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_17425 40c83b7e1c3fa3e4a382f6bc8239ac68 564 PRINTS PR00072 Malic enzyme signature 183 205 7.4E-75 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMS64_02190 1035953becb6cc56fe779d9a081261d6 208 Pfam PF13505 Outer membrane protein beta-barrel domain 8 208 4.8E-23 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AMS64_02190 1035953becb6cc56fe779d9a081261d6 208 Gene3D G3DSA:2.40.160.20 12 208 7.4E-27 T 11-10-2018 AMS64_02190 1035953becb6cc56fe779d9a081261d6 208 SUPERFAMILY SSF56925 23 208 3.66E-25 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMS64_02190 1035953becb6cc56fe779d9a081261d6 208 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 146 208 1.0E-4 T 11-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AMS64_20365 f56d4191d1d506506a0846ca3400adb0 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMS64_20365 f56d4191d1d506506a0846ca3400adb0 138 SUPERFAMILY SSF75620 7 113 3.73E-15 T 11-10-2018 AMS64_20365 f56d4191d1d506506a0846ca3400adb0 138 Gene3D G3DSA:3.30.160.20 1 135 1.5E-33 T 11-10-2018 AMS64_20365 f56d4191d1d506506a0846ca3400adb0 138 Pfam PF00472 RF-1 domain 7 132 2.4E-24 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMS64_17200 c3f68c471f69ef5a50b41f86f6587cca 481 Gene3D G3DSA:1.20.1480.50 179 268 4.1E-5 T 11-10-2018 AMS64_17200 c3f68c471f69ef5a50b41f86f6587cca 481 SMART SM00471 287 437 1.6E-8 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_17200 c3f68c471f69ef5a50b41f86f6587cca 481 SUPERFAMILY SSF109604 267 465 5.97E-36 T 11-10-2018 AMS64_17200 c3f68c471f69ef5a50b41f86f6587cca 481 Pfam PF13487 HD domain 350 419 1.3E-17 T 11-10-2018 AMS64_17200 c3f68c471f69ef5a50b41f86f6587cca 481 Gene3D G3DSA:1.10.3210.10 269 481 2.3E-78 T 11-10-2018 AMS64_17200 c3f68c471f69ef5a50b41f86f6587cca 481 SUPERFAMILY SSF158472 221 264 1.83E-7 T 11-10-2018 AMS64_17200 c3f68c471f69ef5a50b41f86f6587cca 481 SMART SM00304 215 267 3.3E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 Gene3D G3DSA:1.10.8.210 149 211 8.3E-16 T 11-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 SUPERFAMILY SSF53790 212 456 1.57E-79 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 7.7E-16 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 Gene3D G3DSA:3.40.1010.10 213 330 3.0E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 SUPERFAMILY SSF51735 1 112 2.18E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 Gene3D G3DSA:3.30.950.10 331 457 2.2E-43 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 Pfam PF14824 Sirohaem biosynthesis protein central 119 146 3.3E-7 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 427 4.8E-47 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 Pfam PF13241 Putative NAD(P)-binding 6 115 4.2E-26 T 11-10-2018 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 SUPERFAMILY SSF75615 114 209 2.22E-24 T 11-10-2018 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 447 3.2E-90 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 PIRSF PIRSF036426 1 462 1.4E-200 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 1.7E-72 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.433 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 Gene3D G3DSA:3.30.160.110 113 148 1.5E-18 T 11-10-2018 AMS64_11495 e06a1558b651689aa8b01b85e03e1060 463 Gene3D G3DSA:3.40.50.720 1 112 7.5E-33 T 11-10-2018 AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 Pfam PF13193 AMP-binding enzyme C-terminal domain 881 956 9.0E-12 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 Pfam PF00975 Thioesterase domain 1072 1208 4.3E-28 T 11-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 Gene3D G3DSA:3.30.300.30 868 968 1.2E-32 T 11-10-2018 AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 Gene3D G3DSA:3.30.559.30 229 444 4.7E-46 T 11-10-2018 AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1005 1020 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 SUPERFAMILY SSF53474 1045 1312 1.96E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 Pfam PF00501 AMP-binding enzyme 479 873 1.9E-103 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 Gene3D G3DSA:3.40.50.12780 460 867 2.7E-138 T 11-10-2018 AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 Pfam PF00668 Condensation domain 20 434 1.1E-46 T 11-10-2018 IPR001242 Condensation domain AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 ProSitePatterns PS00455 Putative AMP-binding domain signature. 619 630 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 PRINTS PR00154 AMP-binding signature 626 634 7.0E-5 T 11-10-2018 IPR020459 AMP-binding AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 PRINTS PR00154 AMP-binding signature 614 625 7.0E-5 T 11-10-2018 IPR020459 AMP-binding AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 SUPERFAMILY SSF47336 976 1046 7.72E-18 T 11-10-2018 IPR036736 ACP-like superfamily AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 495 897 2.4E-132 T 11-10-2018 IPR010071 Amino acid adenylation domain AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 SUPERFAMILY SSF56801 452 994 4.32E-160 T 11-10-2018 AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 SUPERFAMILY SSF52777 21 182 2.0E-34 T 11-10-2018 AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 Gene3D G3DSA:3.30.559.10 21 216 7.4E-49 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 SMART SM00823 Phosphopantetheine attachment site 981 1050 1.8E-5 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 Gene3D G3DSA:3.40.50.1820 971 1315 4.0E-94 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 SUPERFAMILY SSF52777 200 435 7.11E-33 T 11-10-2018 AMS64_15935 cbfab584ff83ad1971bc77905efb3159 1329 Pfam PF00550 Phosphopantetheine attachment site 982 1046 1.3E-13 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMS64_09340 0a19500c514dcda5261ba9072480db3f 98 SUPERFAMILY SSF47729 3 94 3.97E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMS64_09340 0a19500c514dcda5261ba9072480db3f 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.708 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AMS64_09340 0a19500c514dcda5261ba9072480db3f 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 6.6E-51 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AMS64_09340 0a19500c514dcda5261ba9072480db3f 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.4E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_09340 0a19500c514dcda5261ba9072480db3f 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.4E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_09340 0a19500c514dcda5261ba9072480db3f 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.4E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_09340 0a19500c514dcda5261ba9072480db3f 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.4E-32 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_09340 0a19500c514dcda5261ba9072480db3f 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMS64_09340 0a19500c514dcda5261ba9072480db3f 98 Gene3D G3DSA:4.10.520.10 1 98 5.4E-38 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMS64_09340 0a19500c514dcda5261ba9072480db3f 98 SMART SM00411 3 92 5.7E-41 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMS64_19440 a1b767b7fe2f82869703c2fe8b63a20a 157 Gene3D G3DSA:3.40.50.300 2 154 3.0E-47 T 11-10-2018 AMS64_19440 a1b767b7fe2f82869703c2fe8b63a20a 157 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 134 2.3E-40 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMS64_19440 a1b767b7fe2f82869703c2fe8b63a20a 157 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 140 3.0E-49 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMS64_19440 a1b767b7fe2f82869703c2fe8b63a20a 157 SUPERFAMILY SSF52540 28 152 2.47E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_04965 f6992b6b2db77df17eba0316ed1772b7 545 Gene3D G3DSA:3.40.50.300 1 285 4.2E-135 T 11-10-2018 AMS64_04965 f6992b6b2db77df17eba0316ed1772b7 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 50.779 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AMS64_04965 f6992b6b2db77df17eba0316ed1772b7 545 SUPERFAMILY SSF52540 3 269 3.32E-121 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_04965 f6992b6b2db77df17eba0316ed1772b7 545 Gene3D G3DSA:3.40.50.880 286 545 5.2E-105 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_04965 f6992b6b2db77df17eba0316ed1772b7 545 Pfam PF06418 CTP synthase N-terminus 4 266 3.3E-125 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AMS64_04965 f6992b6b2db77df17eba0316ed1772b7 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 6.0E-62 T 11-10-2018 IPR017926 Glutamine amidotransferase AMS64_04965 f6992b6b2db77df17eba0316ed1772b7 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.0E-261 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AMS64_04965 f6992b6b2db77df17eba0316ed1772b7 545 SUPERFAMILY SSF52317 289 541 2.82E-88 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_06215 3e4d5dd674e0e79992c9f53053dba72c 216 Pfam PF01467 Cytidylyltransferase-like 8 185 1.7E-30 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMS64_06215 3e4d5dd674e0e79992c9f53053dba72c 216 SUPERFAMILY SSF52374 5 214 2.1E-54 T 11-10-2018 AMS64_06215 3e4d5dd674e0e79992c9f53053dba72c 216 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 4 212 31.151 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMS64_06215 3e4d5dd674e0e79992c9f53053dba72c 216 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 66 1.3E-8 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMS64_06215 3e4d5dd674e0e79992c9f53053dba72c 216 Gene3D G3DSA:3.40.50.620 5 216 5.9E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_06215 3e4d5dd674e0e79992c9f53053dba72c 216 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 8 211 1.2E-53 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMS64_13915 abd2561db4557d2db59cd228135bc82b 254 SMART SM00382 26 213 9.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_13915 abd2561db4557d2db59cd228135bc82b 254 Pfam PF00005 ABC transporter 19 165 1.8E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_13915 abd2561db4557d2db59cd228135bc82b 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_13915 abd2561db4557d2db59cd228135bc82b 254 SUPERFAMILY SSF52540 2 227 3.0E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_13915 abd2561db4557d2db59cd228135bc82b 254 Gene3D G3DSA:3.40.50.300 1 253 5.6E-70 T 11-10-2018 AMS64_05530 a15c183874f36e55535901f0b7bcb457 553 Pfam PF06826 Predicted Permease Membrane Region 11 179 5.4E-42 T 11-10-2018 IPR006512 YidE/YbjL duplication AMS64_05530 a15c183874f36e55535901f0b7bcb457 553 Pfam PF06826 Predicted Permease Membrane Region 374 546 1.0E-45 T 11-10-2018 IPR006512 YidE/YbjL duplication AMS64_05530 a15c183874f36e55535901f0b7bcb457 553 SUPERFAMILY SSF116726 203 271 4.58E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_05530 a15c183874f36e55535901f0b7bcb457 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 1.6E-45 T 11-10-2018 IPR006512 YidE/YbjL duplication AMS64_05530 a15c183874f36e55535901f0b7bcb457 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 5.5E-35 T 11-10-2018 IPR006512 YidE/YbjL duplication AMS64_05530 a15c183874f36e55535901f0b7bcb457 553 Gene3D G3DSA:3.30.70.1450 195 273 6.5E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_05530 a15c183874f36e55535901f0b7bcb457 553 Gene3D G3DSA:3.30.70.1450 281 359 3.1E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_05530 a15c183874f36e55535901f0b7bcb457 553 SUPERFAMILY SSF116726 285 360 7.19E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_05530 a15c183874f36e55535901f0b7bcb457 553 Pfam PF02080 TrkA-C domain 291 358 1.1E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMS64_05530 a15c183874f36e55535901f0b7bcb457 553 Pfam PF02080 TrkA-C domain 212 273 8.3E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMS64_05530 a15c183874f36e55535901f0b7bcb457 553 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 553 55.547 T 11-10-2018 IPR023018 Transport protein YidE, putative AMS64_08105 fc3ba94512dffbfb05eb2625d13b837f 249 SUPERFAMILY SSF53850 17 248 1.16E-31 T 11-10-2018 AMS64_08105 fc3ba94512dffbfb05eb2625d13b837f 249 Gene3D G3DSA:3.40.190.10 111 208 7.0E-24 T 11-10-2018 AMS64_08105 fc3ba94512dffbfb05eb2625d13b837f 249 Gene3D G3DSA:3.40.190.10 33 248 7.0E-24 T 11-10-2018 AMS64_08105 fc3ba94512dffbfb05eb2625d13b837f 249 SMART SM00062 26 249 0.008 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_08105 fc3ba94512dffbfb05eb2625d13b837f 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 248 1.4E-20 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_06650 0c15982b8558f97b5abe826f6ec3c946 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMS64_06650 0c15982b8558f97b5abe826f6ec3c946 489 Gene3D G3DSA:3.40.605.10 10 452 3.1E-147 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMS64_06650 0c15982b8558f97b5abe826f6ec3c946 489 Gene3D G3DSA:3.40.309.10 250 440 3.1E-147 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMS64_06650 0c15982b8558f97b5abe826f6ec3c946 489 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 6 489 1.4E-255 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AMS64_06650 0c15982b8558f97b5abe826f6ec3c946 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMS64_06650 0c15982b8558f97b5abe826f6ec3c946 489 Pfam PF00171 Aldehyde dehydrogenase family 12 463 1.2E-125 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMS64_06650 0c15982b8558f97b5abe826f6ec3c946 489 SUPERFAMILY SSF53720 6 458 4.45E-128 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMS64_06650 0c15982b8558f97b5abe826f6ec3c946 489 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 489 58.574 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AMS64_19925 f389631ca2817fcdc0f600f59dea93f1 303 Pfam PF00583 Acetyltransferase (GNAT) family 193 279 2.5E-11 T 11-10-2018 IPR000182 GNAT domain AMS64_19925 f389631ca2817fcdc0f600f59dea93f1 303 Pfam PF12802 MarR family 28 85 1.9E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_19925 f389631ca2817fcdc0f600f59dea93f1 303 Gene3D G3DSA:1.10.10.10 4 130 3.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_19925 f389631ca2817fcdc0f600f59dea93f1 303 SUPERFAMILY SSF46785 6 135 2.31E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_19925 f389631ca2817fcdc0f600f59dea93f1 303 Gene3D G3DSA:3.40.630.30 131 302 1.7E-24 T 11-10-2018 AMS64_19925 f389631ca2817fcdc0f600f59dea93f1 303 SMART SM00347 22 121 3.9E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_19925 f389631ca2817fcdc0f600f59dea93f1 303 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMS64_19925 f389631ca2817fcdc0f600f59dea93f1 303 SUPERFAMILY SSF55729 144 302 1.72E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_08080 0f12be4a416039010798105d78acf20d 299 SUPERFAMILY SSF46689 19 69 7.35E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_08080 0f12be4a416039010798105d78acf20d 299 Gene3D G3DSA:3.20.80.10 144 297 8.2E-26 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMS64_08080 0f12be4a416039010798105d78acf20d 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 102 2.1E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_08080 0f12be4a416039010798105d78acf20d 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 102 118 2.1E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_08080 0f12be4a416039010798105d78acf20d 299 Pfam PF06445 GyrI-like small molecule binding domain 145 296 3.1E-15 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain AMS64_08080 0f12be4a416039010798105d78acf20d 299 SMART SM00342 35 118 7.3E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_08080 0f12be4a416039010798105d78acf20d 299 SUPERFAMILY SSF55136 209 296 3.14E-21 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMS64_08080 0f12be4a416039010798105d78acf20d 299 Pfam PF12833 Helix-turn-helix domain 41 120 1.9E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_08080 0f12be4a416039010798105d78acf20d 299 SMART SM00871 144 297 3.3E-17 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding AMS64_08080 0f12be4a416039010798105d78acf20d 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 72 114 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_08080 0f12be4a416039010798105d78acf20d 299 SUPERFAMILY SSF46689 72 122 1.61E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_08080 0f12be4a416039010798105d78acf20d 299 Gene3D G3DSA:1.10.10.60 73 125 4.6E-14 T 11-10-2018 AMS64_08080 0f12be4a416039010798105d78acf20d 299 Gene3D G3DSA:1.10.10.60 13 72 3.9E-19 T 11-10-2018 AMS64_08295 278c0ed9ae1e10b32378ba8f3a501203 364 Gene3D G3DSA:2.40.50.940 224 279 1.4E-13 T 11-10-2018 AMS64_08295 278c0ed9ae1e10b32378ba8f3a501203 364 SUPERFAMILY SSF52540 6 243 2.05E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08295 278c0ed9ae1e10b32378ba8f3a501203 364 SMART SM00382 30 213 1.2E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_08295 278c0ed9ae1e10b32378ba8f3a501203 364 Pfam PF00005 ABC transporter 21 163 1.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_08295 278c0ed9ae1e10b32378ba8f3a501203 364 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 3 357 1.4E-147 T 11-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 AMS64_08295 278c0ed9ae1e10b32378ba8f3a501203 364 Gene3D G3DSA:3.40.50.300 5 223 1.0E-70 T 11-10-2018 AMS64_08295 278c0ed9ae1e10b32378ba8f3a501203 364 Gene3D G3DSA:2.40.50.140 280 330 1.4E-13 T 11-10-2018 AMS64_08295 278c0ed9ae1e10b32378ba8f3a501203 364 Pfam PF08402 TOBE domain 273 359 4.7E-9 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AMS64_08295 278c0ed9ae1e10b32378ba8f3a501203 364 SUPERFAMILY SSF50331 239 362 2.11E-12 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMS64_08295 278c0ed9ae1e10b32378ba8f3a501203 364 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_09385 03838d06d3a9d8652928eb458d709f5c 291 Pfam PF13407 Periplasmic binding protein domain 27 276 2.9E-57 T 11-10-2018 IPR025997 Periplasmic binding protein AMS64_09385 03838d06d3a9d8652928eb458d709f5c 291 Gene3D G3DSA:3.40.50.2300 30 276 8.7E-95 T 11-10-2018 AMS64_09385 03838d06d3a9d8652928eb458d709f5c 291 Gene3D G3DSA:3.40.50.2300 124 258 8.7E-95 T 11-10-2018 AMS64_09385 03838d06d3a9d8652928eb458d709f5c 291 SUPERFAMILY SSF53822 25 290 3.33E-82 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_09920 4f51b49eadcfbceaf48c3cbee4b804db 174 Gene3D G3DSA:3.30.1370.110 48 174 2.6E-27 T 11-10-2018 AMS64_09920 4f51b49eadcfbceaf48c3cbee4b804db 174 Pfam PF01713 Smr domain 96 170 1.3E-18 T 11-10-2018 IPR002625 Smr domain AMS64_09920 4f51b49eadcfbceaf48c3cbee4b804db 174 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 172 36.941 T 11-10-2018 IPR022990 Uncharacterised protein family UPF0115 AMS64_09920 4f51b49eadcfbceaf48c3cbee4b804db 174 SMART SM00463 93 171 3.1E-18 T 11-10-2018 IPR002625 Smr domain AMS64_09920 4f51b49eadcfbceaf48c3cbee4b804db 174 SUPERFAMILY SSF160443 93 170 3.66E-11 T 11-10-2018 IPR036063 Smr domain superfamily AMS64_00565 853bc2c4ee28a99c4eefb5ff177780c9 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.2E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_00565 853bc2c4ee28a99c4eefb5ff177780c9 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 296 2.4E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_00565 853bc2c4ee28a99c4eefb5ff177780c9 453 Gene3D G3DSA:3.90.550.10 2 224 8.7E-68 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_00565 853bc2c4ee28a99c4eefb5ff177780c9 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMS64_00565 853bc2c4ee28a99c4eefb5ff177780c9 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 271 299 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMS64_00565 853bc2c4ee28a99c4eefb5ff177780c9 453 Gene3D G3DSA:2.160.10.10 225 453 3.9E-69 T 11-10-2018 AMS64_00565 853bc2c4ee28a99c4eefb5ff177780c9 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.586 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AMS64_00565 853bc2c4ee28a99c4eefb5ff177780c9 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 9.8E-199 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AMS64_00565 853bc2c4ee28a99c4eefb5ff177780c9 453 SUPERFAMILY SSF51161 251 435 1.26E-48 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_00565 853bc2c4ee28a99c4eefb5ff177780c9 453 Pfam PF12804 MobA-like NTP transferase domain 5 128 1.9E-24 T 11-10-2018 IPR025877 MobA-like NTP transferase AMS64_00565 853bc2c4ee28a99c4eefb5ff177780c9 453 SUPERFAMILY SSF53448 1 249 7.51E-67 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_10955 22984c4887a120745125d6f30b74a28a 487 Gene3D G3DSA:3.20.20.70 1 486 8.9E-210 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_10955 22984c4887a120745125d6f30b74a28a 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.1E-196 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMS64_10955 22984c4887a120745125d6f30b74a28a 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 2.4E-161 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AMS64_10955 22984c4887a120745125d6f30b74a28a 487 Pfam PF00571 CBS domain 95 143 1.4E-8 T 11-10-2018 IPR000644 CBS domain AMS64_10955 22984c4887a120745125d6f30b74a28a 487 Pfam PF00571 CBS domain 149 202 5.5E-6 T 11-10-2018 IPR000644 CBS domain AMS64_10955 22984c4887a120745125d6f30b74a28a 487 SMART SM00116 96 144 1.8E-10 T 11-10-2018 IPR000644 CBS domain AMS64_10955 22984c4887a120745125d6f30b74a28a 487 SMART SM00116 158 206 3.5E-10 T 11-10-2018 IPR000644 CBS domain AMS64_10955 22984c4887a120745125d6f30b74a28a 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AMS64_10955 22984c4887a120745125d6f30b74a28a 487 SMART SM01240 7 473 0.0 T 11-10-2018 AMS64_10955 22984c4887a120745125d6f30b74a28a 487 SUPERFAMILY SSF51412 1 477 7.2E-127 T 11-10-2018 AMS64_10955 22984c4887a120745125d6f30b74a28a 487 SUPERFAMILY SSF54631 94 203 9.22E-28 T 11-10-2018 AMS64_10955 22984c4887a120745125d6f30b74a28a 487 PIRSF PIRSF000130 1 487 5.0E-199 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMS64_10955 22984c4887a120745125d6f30b74a28a 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.05 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMS64_10500 8b429a3b77f984bf659819892208410f 163 Pfam PF00174 Oxidoreductase molybdopterin binding domain 70 137 6.5E-6 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AMS64_10500 8b429a3b77f984bf659819892208410f 163 SUPERFAMILY SSF56524 28 162 5.49E-16 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMS64_10810 72e6f1823d2909869488cc8a98309471 191 SUPERFAMILY SSF53098 73 180 2.43E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_10810 72e6f1823d2909869488cc8a98309471 191 Pfam PF00665 Integrase core domain 79 179 6.4E-27 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_10810 72e6f1823d2909869488cc8a98309471 191 Pfam PF13276 HTH-like domain 5 53 1.0E-7 T 11-10-2018 IPR025948 HTH-like domain AMS64_10810 72e6f1823d2909869488cc8a98309471 191 Gene3D G3DSA:3.30.420.10 71 184 1.3E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_12505 89ef6b13ba2dd72bcda10da0ae2c5e2d 36 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 27 2.2E-8 T 11-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AMS64_12505 89ef6b13ba2dd72bcda10da0ae2c5e2d 36 Pfam PF08173 Membrane bound YbgT-like protein 1 27 8.2E-12 T 11-10-2018 IPR012994 Membrane bound YbgT-like AMS64_20885 e8b1f9c996f6e7fa9ed68f44c1d70d9b 391 Pfam PF03594 Benzoate membrane transport protein 3 376 5.3E-148 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AMS64_20885 e8b1f9c996f6e7fa9ed68f44c1d70d9b 391 TIGRFAM TIGR00843 benE: benzoate transporter 5 376 2.2E-127 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AMS64_18015 55a114b18d463ad0484b7d8ad7131ef8 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AMS64_18015 55a114b18d463ad0484b7d8ad7131ef8 285 Pfam PF01148 Cytidylyltransferase family 3 278 4.2E-64 T 11-10-2018 AMS64_15420 07ed331a291b99e2eb4f61a7474977cf 745 Gene3D G3DSA:1.10.3720.10 513 741 1.3E-20 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_15420 07ed331a291b99e2eb4f61a7474977cf 745 SUPERFAMILY SSF161098 514 731 3.27E-18 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_15420 07ed331a291b99e2eb4f61a7474977cf 745 SUPERFAMILY SSF50978 230 404 4.39E-9 T 11-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 AMS64_15420 07ed331a291b99e2eb4f61a7474977cf 745 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 461 739 9.4E-9 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_15420 07ed331a291b99e2eb4f61a7474977cf 745 SUPERFAMILY SSF161098 427 521 2.18E-6 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_10390 9c6a2de3b15818e8701b8ce4a2667348 378 Gene3D G3DSA:3.40.50.2000 347 359 7.5E-21 T 11-10-2018 AMS64_10390 9c6a2de3b15818e8701b8ce4a2667348 378 SUPERFAMILY SSF53756 12 366 3.57E-31 T 11-10-2018 AMS64_10390 9c6a2de3b15818e8701b8ce4a2667348 378 Gene3D G3DSA:3.40.50.2000 190 346 7.5E-21 T 11-10-2018 AMS64_10390 9c6a2de3b15818e8701b8ce4a2667348 378 Pfam PF00534 Glycosyl transferases group 1 194 343 1.3E-10 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMS64_10390 9c6a2de3b15818e8701b8ce4a2667348 378 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 127 134 - T 11-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 AMS64_09030 81ba7a0b9c7cf5c648acfdecf3f03314 292 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 170 3.7E-50 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AMS64_09030 81ba7a0b9c7cf5c648acfdecf3f03314 292 Gene3D G3DSA:3.30.390.50 179 285 1.2E-24 T 11-10-2018 AMS64_09030 81ba7a0b9c7cf5c648acfdecf3f03314 292 SUPERFAMILY SSF55447 181 286 4.06E-26 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMS64_09030 81ba7a0b9c7cf5c648acfdecf3f03314 292 SUPERFAMILY SSF56176 6 171 6.18E-50 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMS64_09030 81ba7a0b9c7cf5c648acfdecf3f03314 292 SMART SM01092 181 283 8.0E-27 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMS64_09030 81ba7a0b9c7cf5c648acfdecf3f03314 292 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 182 280 1.8E-24 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMS64_09030 81ba7a0b9c7cf5c648acfdecf3f03314 292 Gene3D G3DSA:3.30.465.10 4 173 3.6E-50 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 Gene3D G3DSA:3.40.50.300 90 285 6.5E-126 T 11-10-2018 AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.0E-181 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 Gene3D G3DSA:1.10.260.30 328 452 2.8E-43 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 Pfam PF02978 Signal peptide binding domain 329 427 7.5E-33 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.0E-22 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 SMART SM00382 99 247 6.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 Gene3D G3DSA:1.20.120.140 4 305 6.5E-126 T 11-10-2018 AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 SUPERFAMILY SSF47446 298 431 9.27E-46 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 SUPERFAMILY SSF52540 42 352 2.98E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 SMART SM00963 1 86 1.6E-37 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 34.624 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 SMART SM00962 100 296 8.1E-118 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMS64_20280 8856e89edf5a5013d4c305f354f1b9df 458 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 1.6E-76 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMS64_08980 381a021e8e051750da84d7c4abb9b26b 168 Gene3D G3DSA:3.90.550.10 1 158 6.5E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_08980 381a021e8e051750da84d7c4abb9b26b 168 SUPERFAMILY SSF53448 1 152 3.22E-17 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_08980 381a021e8e051750da84d7c4abb9b26b 168 Pfam PF12804 MobA-like NTP transferase domain 1 131 6.5E-24 T 11-10-2018 IPR025877 MobA-like NTP transferase AMS64_13080 4c75efadcaa06581af49b7ad12b4e872 267 Gene3D G3DSA:2.40.30.10 3 129 1.7E-37 T 11-10-2018 AMS64_13080 4c75efadcaa06581af49b7ad12b4e872 267 Pfam PF04954 Siderophore-interacting protein 136 251 2.1E-27 T 11-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain AMS64_13080 4c75efadcaa06581af49b7ad12b4e872 267 Gene3D G3DSA:3.40.50.80 132 267 3.5E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_13080 4c75efadcaa06581af49b7ad12b4e872 267 SUPERFAMILY SSF63380 5 133 4.48E-16 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_13080 4c75efadcaa06581af49b7ad12b4e872 267 Pfam PF08021 Siderophore-interacting FAD-binding domain 15 129 1.5E-38 T 11-10-2018 IPR013113 FAD-binding 9, siderophore-interacting AMS64_20185 39acb4b656dc7eb8d52fa760e58be707 165 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMS64_20185 39acb4b656dc7eb8d52fa760e58be707 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 4.3E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMS64_20185 39acb4b656dc7eb8d52fa760e58be707 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 4.3E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMS64_20185 39acb4b656dc7eb8d52fa760e58be707 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 4.3E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMS64_20185 39acb4b656dc7eb8d52fa760e58be707 165 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 163 17.45 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMS64_20185 39acb4b656dc7eb8d52fa760e58be707 165 Pfam PF01252 Signal peptidase (SPase) II 16 156 2.4E-39 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMS64_20185 39acb4b656dc7eb8d52fa760e58be707 165 TIGRFAM TIGR00077 lspA: signal peptidase II 5 163 2.5E-48 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMS64_04660 ee4b7aef70e5886b6fb5bd0d34874bda 357 Pfam PF02445 Quinolinate synthetase A protein 36 344 5.2E-104 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMS64_04660 ee4b7aef70e5886b6fb5bd0d34874bda 357 Gene3D G3DSA:3.40.50.10800 35 326 1.4E-96 T 11-10-2018 AMS64_04660 ee4b7aef70e5886b6fb5bd0d34874bda 357 Gene3D G3DSA:3.40.50.10800 204 299 1.4E-96 T 11-10-2018 AMS64_04660 ee4b7aef70e5886b6fb5bd0d34874bda 357 Gene3D G3DSA:3.40.50.10800 119 343 1.4E-96 T 11-10-2018 AMS64_04660 ee4b7aef70e5886b6fb5bd0d34874bda 357 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 351 66.716 T 11-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMS64_04660 ee4b7aef70e5886b6fb5bd0d34874bda 357 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 32 345 2.1E-114 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMS64_04660 ee4b7aef70e5886b6fb5bd0d34874bda 357 SUPERFAMILY SSF142754 33 345 1.83E-106 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMS64_18800 93c768eb034bb076564a8b9f9b698e48 254 SUPERFAMILY SSF51351 4 250 4.19E-83 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_18800 93c768eb034bb076564a8b9f9b698e48 254 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 240 8.2E-63 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_18800 93c768eb034bb076564a8b9f9b698e48 254 Pfam PF00121 Triosephosphate isomerase 7 247 2.5E-85 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_18800 93c768eb034bb076564a8b9f9b698e48 254 Gene3D G3DSA:3.20.20.70 1 254 7.4E-91 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_18800 93c768eb034bb076564a8b9f9b698e48 254 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_18800 93c768eb034bb076564a8b9f9b698e48 254 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 4 249 55.919 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_21010 b88278a69ffdb4be91532c2bf8bc6336 360 Gene3D G3DSA:3.40.50.1970 3 158 8.4E-44 T 11-10-2018 AMS64_21010 b88278a69ffdb4be91532c2bf8bc6336 360 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMS64_21010 b88278a69ffdb4be91532c2bf8bc6336 360 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMS64_21010 b88278a69ffdb4be91532c2bf8bc6336 360 SUPERFAMILY SSF56796 3 355 5.23E-95 T 11-10-2018 AMS64_21010 b88278a69ffdb4be91532c2bf8bc6336 360 PIRSF PIRSF000112 1 359 1.5E-96 T 11-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 AMS64_21010 b88278a69ffdb4be91532c2bf8bc6336 360 Gene3D G3DSA:1.20.1090.10 160 360 6.7E-76 T 11-10-2018 AMS64_21010 b88278a69ffdb4be91532c2bf8bc6336 360 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 1.5E-70 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AMS64_15435 97eb693ee620913dd8c2daafcd298140 535 Gene3D G3DSA:3.20.20.360 5 414 4.5E-193 T 11-10-2018 AMS64_15435 97eb693ee620913dd8c2daafcd298140 535 PIRSF PIRSF001363 5 535 1.5E-250 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMS64_15435 97eb693ee620913dd8c2daafcd298140 535 Gene3D G3DSA:1.20.1220.12 415 535 1.0E-48 T 11-10-2018 AMS64_15435 97eb693ee620913dd8c2daafcd298140 535 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 26 535 4.0E-253 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMS64_15435 97eb693ee620913dd8c2daafcd298140 535 Pfam PF01274 Malate synthase 15 535 4.5E-208 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMS64_15435 97eb693ee620913dd8c2daafcd298140 535 SUPERFAMILY SSF51645 9 534 9.68E-193 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMS64_01185 612580ad924dd69aca423ee52b7b5300 161 Gene3D G3DSA:3.40.50.620 1 161 3.2E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_01185 612580ad924dd69aca423ee52b7b5300 161 SUPERFAMILY SSF52374 4 157 5.36E-47 T 11-10-2018 AMS64_01185 612580ad924dd69aca423ee52b7b5300 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 9.4E-62 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMS64_01185 612580ad924dd69aca423ee52b7b5300 161 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 2.0E-4 T 11-10-2018 AMS64_01185 612580ad924dd69aca423ee52b7b5300 161 Pfam PF01467 Cytidylyltransferase-like 6 134 1.0E-22 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMS64_01185 612580ad924dd69aca423ee52b7b5300 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.559 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMS64_01185 612580ad924dd69aca423ee52b7b5300 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 2.8E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMS64_01185 612580ad924dd69aca423ee52b7b5300 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 2.8E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMS64_01185 612580ad924dd69aca423ee52b7b5300 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 2.8E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMS64_01185 612580ad924dd69aca423ee52b7b5300 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 2.8E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMS64_01185 612580ad924dd69aca423ee52b7b5300 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 2.8E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMS64_01185 612580ad924dd69aca423ee52b7b5300 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 61 8.8E-20 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMS64_14735 8ce818d595c31a221ebbadee52cb871d 202 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 2.0E-27 T 11-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AMS64_14735 8ce818d595c31a221ebbadee52cb871d 202 PIRSF PIRSF011489 1 196 6.6E-59 T 11-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AMS64_18480 d0150b76ea711b0f262c8a1577225fd0 361 Pfam PF14072 DNA-sulfur modification-associated 12 344 2.9E-119 T 11-10-2018 IPR017642 DNA sulphur modification protein DndB AMS64_18480 d0150b76ea711b0f262c8a1577225fd0 361 TIGRFAM TIGR03187 DGQHR: DGQHR domain 14 288 2.8E-85 T 11-10-2018 IPR017601 DGQHR-containing domain AMS64_18480 d0150b76ea711b0f262c8a1577225fd0 361 TIGRFAM TIGR03233 DNA_S_dndB: DNA sulfur modification protein DndB 8 357 4.3E-141 T 11-10-2018 IPR017642 DNA sulphur modification protein DndB AMS64_07485 df4bd682da7635e1483caf7f0f2c4df0 114 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.7E-45 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related AMS64_07485 df4bd682da7635e1483caf7f0f2c4df0 114 PIRSF PIRSF005894 1 107 1.5E-50 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AMS64_07485 df4bd682da7635e1483caf7f0f2c4df0 114 Pfam PF00462 Glutaredoxin 16 80 1.3E-17 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMS64_07485 df4bd682da7635e1483caf7f0f2c4df0 114 SUPERFAMILY SSF52833 1 103 6.66E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_07485 df4bd682da7635e1483caf7f0f2c4df0 114 Gene3D G3DSA:3.40.30.10 2 107 8.0E-31 T 11-10-2018 AMS64_08325 5dbf4abf2d7cad98727b48e5cecf17a2 150 Pfam PF00293 NUDIX domain 10 121 1.4E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_08325 5dbf4abf2d7cad98727b48e5cecf17a2 150 SUPERFAMILY SSF55811 9 137 1.49E-26 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_08325 5dbf4abf2d7cad98727b48e5cecf17a2 150 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMS64_08325 5dbf4abf2d7cad98727b48e5cecf17a2 150 Gene3D G3DSA:3.90.79.10 6 139 4.2E-24 T 11-10-2018 AMS64_13555 68fc6a0c9e181641a52c2e30525d5e61 192 Gene3D G3DSA:3.40.50.10490 1 192 1.8E-71 T 11-10-2018 AMS64_13555 68fc6a0c9e181641a52c2e30525d5e61 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 187 4.3E-82 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AMS64_13555 68fc6a0c9e181641a52c2e30525d5e61 192 SUPERFAMILY SSF53697 1 189 7.89E-53 T 11-10-2018 AMS64_13555 68fc6a0c9e181641a52c2e30525d5e61 192 Pfam PF13580 SIS domain 23 146 6.8E-31 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMS64_13555 68fc6a0c9e181641a52c2e30525d5e61 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.827 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AMS64_10190 17de1b3da5e277492e23fcf7092bd37d 506 Gene3D G3DSA:3.40.50.620 5 224 2.0E-97 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_10190 17de1b3da5e277492e23fcf7092bd37d 506 SUPERFAMILY SSF48173 223 492 1.18E-59 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AMS64_10190 17de1b3da5e277492e23fcf7092bd37d 506 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 4 217 1.5E-63 T 11-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein AMS64_10190 17de1b3da5e277492e23fcf7092bd37d 506 Gene3D G3DSA:1.25.40.80 130 315 2.0E-97 T 11-10-2018 AMS64_10190 17de1b3da5e277492e23fcf7092bd37d 506 Gene3D G3DSA:1.10.10.1710 440 506 1.6E-23 T 11-10-2018 AMS64_10190 17de1b3da5e277492e23fcf7092bd37d 506 Gene3D G3DSA:1.10.579.10 319 439 2.8E-54 T 11-10-2018 AMS64_06890 770b0785a57c542c5161bc6bb5434e37 304 SUPERFAMILY SSF53850 89 293 5.43E-28 T 11-10-2018 AMS64_06890 770b0785a57c542c5161bc6bb5434e37 304 Gene3D G3DSA:1.10.10.10 1 82 3.8E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_06890 770b0785a57c542c5161bc6bb5434e37 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06890 770b0785a57c542c5161bc6bb5434e37 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06890 770b0785a57c542c5161bc6bb5434e37 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06890 770b0785a57c542c5161bc6bb5434e37 304 Gene3D G3DSA:3.40.190.10 89 284 1.6E-24 T 11-10-2018 AMS64_06890 770b0785a57c542c5161bc6bb5434e37 304 Pfam PF03466 LysR substrate binding domain 86 290 1.0E-26 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_06890 770b0785a57c542c5161bc6bb5434e37 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.5E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06890 770b0785a57c542c5161bc6bb5434e37 304 SUPERFAMILY SSF46785 1 108 2.67E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_06890 770b0785a57c542c5161bc6bb5434e37 304 Gene3D G3DSA:3.40.190.10 160 263 1.6E-24 T 11-10-2018 AMS64_08810 dc8516c2e9ad0c83d93c98385cf16d5d 107 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 6 103 9.0E-16 T 11-10-2018 IPR007376 dsDNA mimic, putative AMS64_08810 dc8516c2e9ad0c83d93c98385cf16d5d 107 Pfam PF04269 Protein of unknown function, DUF440 4 103 4.9E-36 T 11-10-2018 IPR007376 dsDNA mimic, putative AMS64_08810 dc8516c2e9ad0c83d93c98385cf16d5d 107 SUPERFAMILY SSF102816 3 102 9.68E-24 T 11-10-2018 IPR036763 Putative dsDNA mimic superfamily AMS64_08810 dc8516c2e9ad0c83d93c98385cf16d5d 107 Gene3D G3DSA:3.10.450.140 5 103 9.6E-34 T 11-10-2018 IPR036763 Putative dsDNA mimic superfamily AMS64_05370 7ea6008d0e0c5fc1d8587c5071bfb1fd 309 Gene3D G3DSA:3.30.420.40 9 296 1.3E-83 T 11-10-2018 AMS64_05370 7ea6008d0e0c5fc1d8587c5071bfb1fd 309 SUPERFAMILY SSF53067 9 304 1.5E-63 T 11-10-2018 AMS64_05370 7ea6008d0e0c5fc1d8587c5071bfb1fd 309 Gene3D G3DSA:3.30.420.40 128 283 1.3E-83 T 11-10-2018 AMS64_05370 7ea6008d0e0c5fc1d8587c5071bfb1fd 309 Pfam PF00480 ROK family 9 300 1.2E-73 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMS64_05370 7ea6008d0e0c5fc1d8587c5071bfb1fd 309 ProSitePatterns PS01125 ROK family signature. 140 167 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMS64_08095 825d1ec954293c085719047cfe51ed45 306 SUPERFAMILY SSF46785 6 119 1.5E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_08095 825d1ec954293c085719047cfe51ed45 306 Gene3D G3DSA:3.40.190.10 170 274 1.1E-61 T 11-10-2018 AMS64_08095 825d1ec954293c085719047cfe51ed45 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08095 825d1ec954293c085719047cfe51ed45 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08095 825d1ec954293c085719047cfe51ed45 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08095 825d1ec954293c085719047cfe51ed45 306 Gene3D G3DSA:1.10.10.10 9 98 1.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_08095 825d1ec954293c085719047cfe51ed45 306 Pfam PF03466 LysR substrate binding domain 95 299 1.2E-37 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_08095 825d1ec954293c085719047cfe51ed45 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.0E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08095 825d1ec954293c085719047cfe51ed45 306 Gene3D G3DSA:3.40.190.10 99 297 1.1E-61 T 11-10-2018 AMS64_08095 825d1ec954293c085719047cfe51ed45 306 SUPERFAMILY SSF53850 96 303 5.61E-39 T 11-10-2018 AMS64_11800 4fd01333b9a4946caacc9e97d0885157 1485 Gene3D G3DSA:3.20.20.70 430 791 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_11800 4fd01333b9a4946caacc9e97d0885157 1485 SUPERFAMILY SSF56235 13 428 6.43E-148 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_11800 4fd01333b9a4946caacc9e97d0885157 1485 Pfam PF01493 GXGXG motif 1234 1418 2.7E-76 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 AMS64_11800 4fd01333b9a4946caacc9e97d0885157 1485 Gene3D G3DSA:3.20.20.70 483 1170 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_11800 4fd01333b9a4946caacc9e97d0885157 1485 Pfam PF01645 Conserved region in glutamate synthase 792 1155 3.7E-156 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AMS64_11800 4fd01333b9a4946caacc9e97d0885157 1485 Pfam PF04898 Glutamate synthase central domain 457 735 3.8E-104 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AMS64_11800 4fd01333b9a4946caacc9e97d0885157 1485 Pfam PF00310 Glutamine amidotransferases class-II 13 425 1.6E-170 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AMS64_11800 4fd01333b9a4946caacc9e97d0885157 1485 Gene3D G3DSA:2.160.20.60 1197 1467 6.5E-100 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AMS64_11800 4fd01333b9a4946caacc9e97d0885157 1485 SUPERFAMILY SSF51395 435 1189 8.96E-258 T 11-10-2018 AMS64_11800 4fd01333b9a4946caacc9e97d0885157 1485 SUPERFAMILY SSF69336 1212 1464 8.37E-89 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AMS64_11800 4fd01333b9a4946caacc9e97d0885157 1485 Gene3D G3DSA:3.60.20.10 13 545 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_13775 568e772c8c0d6fa53a544eb7622ceb56 77 Gene3D G3DSA:3.30.1490.370 15 76 7.0E-9 T 11-10-2018 AMS64_07780 568e772c8c0d6fa53a544eb7622ceb56 77 Gene3D G3DSA:3.30.1490.370 15 76 7.0E-9 T 11-10-2018 AMS64_09080 2db7f2638768327e24d65467987aaea2 257 Gene3D G3DSA:3.20.20.70 1 257 1.2E-90 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_09080 2db7f2638768327e24d65467987aaea2 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.826 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AMS64_09080 2db7f2638768327e24d65467987aaea2 257 SUPERFAMILY SSF51366 1 256 2.43E-71 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMS64_09080 2db7f2638768327e24d65467987aaea2 257 Pfam PF00977 Histidine biosynthesis protein 5 239 1.1E-75 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AMS64_09080 2db7f2638768327e24d65467987aaea2 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 4.7E-109 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AMS64_07840 67e9273d5bd4f0c9584c9feb5ebedd0b 242 Gene3D G3DSA:3.30.70.1530 15 86 2.8E-26 T 11-10-2018 AMS64_07840 67e9273d5bd4f0c9584c9feb5ebedd0b 242 Gene3D G3DSA:3.30.300.30 88 195 5.9E-40 T 11-10-2018 AMS64_07840 67e9273d5bd4f0c9584c9feb5ebedd0b 242 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 189 9.6E-72 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AMS64_07840 67e9273d5bd4f0c9584c9feb5ebedd0b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 112 125 2.2E-30 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AMS64_07840 67e9273d5bd4f0c9584c9feb5ebedd0b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 92 107 2.2E-30 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AMS64_07840 67e9273d5bd4f0c9584c9feb5ebedd0b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 161 173 2.2E-30 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AMS64_07840 67e9273d5bd4f0c9584c9feb5ebedd0b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 72 85 2.2E-30 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AMS64_07840 67e9273d5bd4f0c9584c9feb5ebedd0b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 20 30 2.2E-30 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AMS64_07840 67e9273d5bd4f0c9584c9feb5ebedd0b 242 Pfam PF01514 Secretory protein of YscJ/FliF family 5 182 6.1E-28 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF AMS64_13715 67e9273d5bd4f0c9584c9feb5ebedd0b 242 Gene3D G3DSA:3.30.70.1530 15 86 2.8E-26 T 11-10-2018 AMS64_13715 67e9273d5bd4f0c9584c9feb5ebedd0b 242 Gene3D G3DSA:3.30.300.30 88 195 5.9E-40 T 11-10-2018 AMS64_13715 67e9273d5bd4f0c9584c9feb5ebedd0b 242 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 189 9.6E-72 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AMS64_13715 67e9273d5bd4f0c9584c9feb5ebedd0b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 112 125 2.2E-30 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AMS64_13715 67e9273d5bd4f0c9584c9feb5ebedd0b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 92 107 2.2E-30 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AMS64_13715 67e9273d5bd4f0c9584c9feb5ebedd0b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 161 173 2.2E-30 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AMS64_13715 67e9273d5bd4f0c9584c9feb5ebedd0b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 72 85 2.2E-30 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AMS64_13715 67e9273d5bd4f0c9584c9feb5ebedd0b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 20 30 2.2E-30 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AMS64_13715 67e9273d5bd4f0c9584c9feb5ebedd0b 242 Pfam PF01514 Secretory protein of YscJ/FliF family 5 182 6.1E-28 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF AMS64_02965 11659812bc87e014da49d78bbd077384 595 Gene3D G3DSA:3.40.50.2300 327 548 3.0E-65 T 11-10-2018 AMS64_02965 11659812bc87e014da49d78bbd077384 595 Pfam PF04348 LppC putative lipoprotein 10 554 1.3E-115 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA AMS64_02965 11659812bc87e014da49d78bbd077384 595 Gene3D G3DSA:3.40.50.2300 228 547 3.0E-65 T 11-10-2018 AMS64_02965 11659812bc87e014da49d78bbd077384 595 SUPERFAMILY SSF53822 225 557 8.01E-68 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_02965 11659812bc87e014da49d78bbd077384 595 Gene3D G3DSA:1.25.40.10 3 113 2.1E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_02965 11659812bc87e014da49d78bbd077384 595 Gene3D G3DSA:1.25.40.650 117 223 5.6E-20 T 11-10-2018 AMS64_03950 2e2b97f71687fc40008e175f7c853bfb 190 SMART SM00271 139 189 3.2E-4 T 11-10-2018 IPR001623 DnaJ domain AMS64_03950 2e2b97f71687fc40008e175f7c853bfb 190 Pfam PF00226 DnaJ domain 146 188 2.9E-7 T 11-10-2018 IPR001623 DnaJ domain AMS64_03950 2e2b97f71687fc40008e175f7c853bfb 190 Pfam PF12339 DNA-J related protein 7 132 3.7E-36 T 11-10-2018 IPR021059 DnaJ-related protein, N-terminal AMS64_03950 2e2b97f71687fc40008e175f7c853bfb 190 Gene3D G3DSA:1.10.287.110 133 190 8.9E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMS64_03950 2e2b97f71687fc40008e175f7c853bfb 190 SUPERFAMILY SSF46565 137 188 1.96E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMS64_07510 0d3cc10d1b7037114d52204da1653c07 129 SUPERFAMILY SSF55298 1 128 1.57E-43 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_07510 0d3cc10d1b7037114d52204da1653c07 129 Gene3D G3DSA:3.30.1330.40 1 129 4.2E-48 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_07510 0d3cc10d1b7037114d52204da1653c07 129 Pfam PF01042 Endoribonuclease L-PSP 8 126 1.1E-41 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMS64_07510 0d3cc10d1b7037114d52204da1653c07 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 AMS64_07510 0d3cc10d1b7037114d52204da1653c07 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 1.3E-50 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 Gene3D G3DSA:1.10.8.540 515 603 3.5E-32 T 11-10-2018 AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 Gene3D G3DSA:3.40.30.60 369 514 5.2E-37 T 11-10-2018 AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 15 703 3.5E-302 T 11-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 Pfam PF00771 FHIPEP family 27 695 4.1E-236 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 1.2E-57 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 1.2E-57 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 152 170 1.2E-57 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 133 149 1.2E-57 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 182 199 1.2E-57 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 233 247 1.2E-57 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 PIRSF PIRSF005419 1 705 2.2E-263 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 138 161 - T 11-10-2018 IPR025505 FHIPEP conserved site AMS64_13815 17599e722a0a61f23a5048c99b1abd97 705 Gene3D G3DSA:1.10.490.80 605 703 3.2E-33 T 11-10-2018 AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 Gene3D G3DSA:1.10.8.540 515 603 3.5E-32 T 11-10-2018 AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 Gene3D G3DSA:3.40.30.60 369 514 5.2E-37 T 11-10-2018 AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 15 703 3.5E-302 T 11-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 Pfam PF00771 FHIPEP family 27 695 4.1E-236 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 1.2E-57 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 1.2E-57 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 152 170 1.2E-57 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 133 149 1.2E-57 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 182 199 1.2E-57 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 233 247 1.2E-57 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 PIRSF PIRSF005419 1 705 2.2E-263 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 138 161 - T 11-10-2018 IPR025505 FHIPEP conserved site AMS64_07740 17599e722a0a61f23a5048c99b1abd97 705 Gene3D G3DSA:1.10.490.80 605 703 3.2E-33 T 11-10-2018 AMS64_03650 9c378d08a543035d84022b51358d03cd 476 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 8 462 2.6E-208 T 11-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 AMS64_03650 9c378d08a543035d84022b51358d03cd 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 5.6E-17 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMS64_03650 9c378d08a543035d84022b51358d03cd 476 Pfam PF00367 phosphotransferase system, EIIB 12 43 1.7E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMS64_03650 9c378d08a543035d84022b51358d03cd 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMS64_03650 9c378d08a543035d84022b51358d03cd 476 Pfam PF02378 Phosphotransferase system, EIIC 112 406 1.5E-32 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMS64_03650 9c378d08a543035d84022b51358d03cd 476 SUPERFAMILY SSF55604 10 83 9.29E-21 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AMS64_03650 9c378d08a543035d84022b51358d03cd 476 Gene3D G3DSA:3.30.1360.60 2 79 8.7E-24 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AMS64_21535 6b964b05cd432c4c051dda8247bc2ff7 618 Gene3D G3DSA:1.20.1530.20 2 384 4.5E-85 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMS64_21535 6b964b05cd432c4c051dda8247bc2ff7 618 Pfam PF02254 TrkA-N domain 410 522 1.8E-21 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMS64_21535 6b964b05cd432c4c051dda8247bc2ff7 618 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 288 7.0E-81 T 11-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AMS64_21535 6b964b05cd432c4c051dda8247bc2ff7 618 SUPERFAMILY SSF51735 409 532 1.27E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_21535 6b964b05cd432c4c051dda8247bc2ff7 618 Gene3D G3DSA:3.40.50.720 407 568 8.9E-32 T 11-10-2018 AMS64_21535 6b964b05cd432c4c051dda8247bc2ff7 618 Pfam PF00999 Sodium/hydrogen exchanger family 11 377 2.0E-65 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMS64_09845 6915b917e8b97e06f414f58f1817f424 218 Gene3D G3DSA:1.10.150.240 19 89 1.7E-53 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMS64_09845 6915b917e8b97e06f414f58f1817f424 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 106 181 1.3E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_09845 6915b917e8b97e06f414f58f1817f424 218 SUPERFAMILY SSF56784 2 218 8.14E-56 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_09845 6915b917e8b97e06f414f58f1817f424 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 189 3.0E-28 T 11-10-2018 AMS64_09845 6915b917e8b97e06f414f58f1817f424 218 Gene3D G3DSA:3.40.50.1000 7 211 1.7E-53 T 11-10-2018 IPR023214 HAD superfamily AMS64_03660 45f0378ba3e194c9686d86daeb384288 199 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 143 171 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMS64_03660 45f0378ba3e194c9686d86daeb384288 199 Pfam PF12464 Maltose acetyltransferase 12 60 1.2E-14 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMS64_03660 45f0378ba3e194c9686d86daeb384288 199 SUPERFAMILY SSF51161 8 190 4.85E-52 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_03660 45f0378ba3e194c9686d86daeb384288 199 SMART SM01266 10 63 1.1E-18 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMS64_03660 45f0378ba3e194c9686d86daeb384288 199 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 134 169 1.5E-10 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_03660 45f0378ba3e194c9686d86daeb384288 199 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 98 114 0.13 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_03660 45f0378ba3e194c9686d86daeb384288 199 Gene3D G3DSA:2.160.10.10 3 192 6.6E-69 T 11-10-2018 AMS64_19480 d572e9594ce7ae89914ba72f54e69f17 166 SMART SM00738 1 100 2.3E-16 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMS64_19480 d572e9594ce7ae89914ba72f54e69f17 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 165 47.361 T 11-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AMS64_19480 d572e9594ce7ae89914ba72f54e69f17 166 SUPERFAMILY SSF82679 1 102 1.7E-27 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMS64_19480 d572e9594ce7ae89914ba72f54e69f17 166 Gene3D G3DSA:3.30.70.940 1 165 3.4E-50 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMS64_19480 d572e9594ce7ae89914ba72f54e69f17 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 161 1.7E-50 T 11-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AMS64_19480 d572e9594ce7ae89914ba72f54e69f17 166 Pfam PF02357 Transcription termination factor nusG 2 96 2.1E-19 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMS64_19480 d572e9594ce7ae89914ba72f54e69f17 166 SUPERFAMILY SSF50104 115 161 8.72E-5 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMS64_06055 10f52332a76bd2f1561ff3a9d0a11dc3 265 Pfam PF06738 Putative threonine/serine exporter 20 257 5.9E-67 T 11-10-2018 IPR010619 Putative threonine/serine exporter AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 SMART SM00636 35 318 0.0043 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 SUPERFAMILY SSF51445 33 328 1.2E-58 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 Gene3D G3DSA:3.20.20.80 28 347 2.0E-94 T 11-10-2018 AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 Gene3D G3DSA:2.60.40.10 348 426 1.0E-25 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 Gene3D G3DSA:2.60.40.10 427 507 3.8E-28 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 SUPERFAMILY SSF51055 508 557 1.02E-13 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 SMART SM00495 674 725 1.9E-8 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 SMART SM00495 511 556 1.6E-11 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 ProSitePatterns PS01095 Chitinases family 18 active site. 147 155 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 Pfam PF00704 Glycosyl hydrolases family 18 37 318 1.2E-33 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 Gene3D G3DSA:2.10.10.20 510 554 1.9E-18 T 11-10-2018 AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 Pfam PF16403 Domain of unknown function (DUF5011) 357 426 5.9E-15 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 AMS64_00725 50dd39faa83fa1a66b6b696bead6acf2 729 Pfam PF16403 Domain of unknown function (DUF5011) 434 503 1.9E-17 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 AMS64_00845 4c3e65a26b263d14beffd19a79128a03 334 Pfam PF13377 Periplasmic binding protein-like domain 169 330 3.4E-41 T 11-10-2018 AMS64_00845 4c3e65a26b263d14beffd19a79128a03 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AMS64_00845 4c3e65a26b263d14beffd19a79128a03 334 SMART SM00354 1 71 3.3E-33 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_00845 4c3e65a26b263d14beffd19a79128a03 334 SUPERFAMILY SSF47413 1 59 4.29E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_00845 4c3e65a26b263d14beffd19a79128a03 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.0E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_00845 4c3e65a26b263d14beffd19a79128a03 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.0E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_00845 4c3e65a26b263d14beffd19a79128a03 334 Gene3D G3DSA:3.40.50.2300 161 323 4.8E-90 T 11-10-2018 AMS64_00845 4c3e65a26b263d14beffd19a79128a03 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_00845 4c3e65a26b263d14beffd19a79128a03 334 Gene3D G3DSA:1.10.260.40 3 59 1.6E-23 T 11-10-2018 AMS64_00845 4c3e65a26b263d14beffd19a79128a03 334 Gene3D G3DSA:3.40.50.2300 70 322 4.8E-90 T 11-10-2018 AMS64_00845 4c3e65a26b263d14beffd19a79128a03 334 SUPERFAMILY SSF53822 60 332 1.04E-92 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_16555 600ba1ca884764dd9318ae2474afb4b6 403 Pfam PF02397 Bacterial sugar transferase 215 397 6.1E-64 T 11-10-2018 IPR003362 Bacterial sugar transferase AMS64_16555 600ba1ca884764dd9318ae2474afb4b6 403 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 161 402 5.6E-93 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMS64_04365 4054fadb539e44515359574e6f31cb77 149 Pfam PF04314 Copper chaperone PCu(A)C 26 129 7.5E-34 T 11-10-2018 IPR007410 Copper chaperone PCuAC AMS64_04365 4054fadb539e44515359574e6f31cb77 149 Gene3D G3DSA:2.60.40.1890 27 140 6.2E-37 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AMS64_04365 4054fadb539e44515359574e6f31cb77 149 SUPERFAMILY SSF110087 4 139 1.31E-41 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AMS64_08870 59150e2c8faebbc0faf6b6b0004bb695 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_08870 59150e2c8faebbc0faf6b6b0004bb695 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 57.358 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_08870 59150e2c8faebbc0faf6b6b0004bb695 251 Pfam PF00121 Triosephosphate isomerase 5 246 8.1E-86 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_08870 59150e2c8faebbc0faf6b6b0004bb695 251 Gene3D G3DSA:3.20.20.70 1 251 7.6E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_08870 59150e2c8faebbc0faf6b6b0004bb695 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 3.5E-69 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_08870 59150e2c8faebbc0faf6b6b0004bb695 251 SUPERFAMILY SSF51351 1 247 5.11E-90 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_09465 2d3541a7c9ab87f9c8cc47634a6471d1 62 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 2.3E-15 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AMS64_09465 2d3541a7c9ab87f9c8cc47634a6471d1 62 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 2.6E-19 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AMS64_18965 f7f3dc28de7dc9a28da3987bad186f30 830 SUPERFAMILY SSF53706 45 660 6.41E-163 T 11-10-2018 AMS64_18965 f7f3dc28de7dc9a28da3987bad186f30 830 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 44 819 0.0 T 11-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 AMS64_18965 f7f3dc28de7dc9a28da3987bad186f30 830 Gene3D G3DSA:3.40.228.10 180 641 5.2E-232 T 11-10-2018 AMS64_18965 f7f3dc28de7dc9a28da3987bad186f30 830 Gene3D G3DSA:3.40.50.740 87 567 5.2E-232 T 11-10-2018 AMS64_18965 f7f3dc28de7dc9a28da3987bad186f30 830 SUPERFAMILY SSF50692 669 818 2.49E-44 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMS64_18965 f7f3dc28de7dc9a28da3987bad186f30 830 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 501 518 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AMS64_18965 f7f3dc28de7dc9a28da3987bad186f30 830 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 9.6E-23 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMS64_18965 f7f3dc28de7dc9a28da3987bad186f30 830 Gene3D G3DSA:2.40.40.20 649 814 1.9E-49 T 11-10-2018 AMS64_18965 f7f3dc28de7dc9a28da3987bad186f30 830 Pfam PF00384 Molybdopterin oxidoreductase 87 558 2.6E-88 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_18965 f7f3dc28de7dc9a28da3987bad186f30 830 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 33 0.0011 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMS64_18965 f7f3dc28de7dc9a28da3987bad186f30 830 Gene3D G3DSA:3.90.55.10 80 615 5.2E-232 T 11-10-2018 AMS64_05505 7d334833b5a24efa768744d2371ac522 251 Gene3D G3DSA:3.40.190.80 152 251 5.1E-33 T 11-10-2018 AMS64_05505 7d334833b5a24efa768744d2371ac522 251 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 2.5E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_05505 7d334833b5a24efa768744d2371ac522 251 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 2.5E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_05505 7d334833b5a24efa768744d2371ac522 251 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 2.5E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_05505 7d334833b5a24efa768744d2371ac522 251 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 2.5E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_05505 7d334833b5a24efa768744d2371ac522 251 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 5 250 40.306 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AMS64_05505 7d334833b5a24efa768744d2371ac522 251 Pfam PF00459 Inositol monophosphatase family 9 243 8.9E-46 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_05505 7d334833b5a24efa768744d2371ac522 251 Gene3D G3DSA:3.30.540.10 5 151 7.6E-45 T 11-10-2018 AMS64_05505 7d334833b5a24efa768744d2371ac522 251 SUPERFAMILY SSF56655 3 248 9.16E-71 T 11-10-2018 AMS64_05505 7d334833b5a24efa768744d2371ac522 251 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AMS64_05505 7d334833b5a24efa768744d2371ac522 251 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 8 250 2.1E-89 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AMS64_01350 3042720934aaa086c5f407eafe19f774 758 SMART SM00052 501 748 6.5E-80 T 11-10-2018 IPR001633 EAL domain AMS64_01350 3042720934aaa086c5f407eafe19f774 758 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 489 9.4E-52 T 11-10-2018 IPR000160 GGDEF domain AMS64_01350 3042720934aaa086c5f407eafe19f774 758 Gene3D G3DSA:3.30.70.270 325 504 2.8E-60 T 11-10-2018 AMS64_01350 3042720934aaa086c5f407eafe19f774 758 Pfam PF00563 EAL domain 507 743 4.4E-71 T 11-10-2018 IPR001633 EAL domain AMS64_01350 3042720934aaa086c5f407eafe19f774 758 SMART SM00267 320 493 1.4E-71 T 11-10-2018 IPR000160 GGDEF domain AMS64_01350 3042720934aaa086c5f407eafe19f774 758 Gene3D G3DSA:3.20.20.450 505 757 9.4E-77 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_01350 3042720934aaa086c5f407eafe19f774 758 SUPERFAMILY SSF55073 336 495 3.06E-49 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_01350 3042720934aaa086c5f407eafe19f774 758 SUPERFAMILY SSF141868 506 754 9.15E-73 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_01350 3042720934aaa086c5f407eafe19f774 758 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 491 6.3E-47 T 11-10-2018 IPR000160 GGDEF domain AMS64_15975 320b8670ec19432879f2199ed1e3fbe4 633 SUPERFAMILY SSF53955 469 628 1.31E-48 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_15975 320b8670ec19432879f2199ed1e3fbe4 633 Gene3D G3DSA:1.10.530.10 464 633 7.7E-52 T 11-10-2018 AMS64_15975 320b8670ec19432879f2199ed1e3fbe4 633 Pfam PF14718 Soluble lytic murein transglycosylase L domain 397 462 4.0E-18 T 11-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AMS64_15975 320b8670ec19432879f2199ed1e3fbe4 633 Gene3D G3DSA:1.25.20.10 21 377 2.1E-108 T 11-10-2018 AMS64_15975 320b8670ec19432879f2199ed1e3fbe4 633 Gene3D G3DSA:1.10.1240.20 395 462 3.4E-15 T 11-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 AMS64_15975 320b8670ec19432879f2199ed1e3fbe4 633 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 491 519 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AMS64_15975 320b8670ec19432879f2199ed1e3fbe4 633 Pfam PF01464 Transglycosylase SLT domain 474 586 7.2E-31 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AMS64_15975 320b8670ec19432879f2199ed1e3fbe4 633 SUPERFAMILY SSF48435 21 467 2.62E-122 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AMS64_04340 f3e15088f08a33462da884e305f8358d 534 Gene3D G3DSA:3.40.190.10 37 515 1.1E-177 T 11-10-2018 AMS64_04340 f3e15088f08a33462da884e305f8358d 534 PIRSF PIRSF002741 5 534 5.3E-106 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMS64_04340 f3e15088f08a33462da884e305f8358d 534 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 449 3.1E-83 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AMS64_04340 f3e15088f08a33462da884e305f8358d 534 Gene3D G3DSA:3.90.76.10 63 186 1.1E-177 T 11-10-2018 AMS64_04340 f3e15088f08a33462da884e305f8358d 534 SUPERFAMILY SSF53850 26 522 6.7E-136 T 11-10-2018 AMS64_04340 f3e15088f08a33462da884e305f8358d 534 Gene3D G3DSA:3.10.105.10 288 503 1.1E-177 T 11-10-2018 AMS64_11925 d2a9907b2188266658782a2f30bcf84a 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 114 260 4.8E-17 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AMS64_11925 d2a9907b2188266658782a2f30bcf84a 328 Gene3D G3DSA:3.40.190.10 127 254 2.4E-53 T 11-10-2018 AMS64_11925 d2a9907b2188266658782a2f30bcf84a 328 Gene3D G3DSA:3.40.190.150 33 319 2.4E-53 T 11-10-2018 AMS64_11925 d2a9907b2188266658782a2f30bcf84a 328 PIRSF PIRSF017082 1 328 2.1E-77 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AMS64_11925 d2a9907b2188266658782a2f30bcf84a 328 SUPERFAMILY SSF53850 102 278 7.96E-6 T 11-10-2018 AMS64_20370 40ad7b52031a10a59a46d0ebdd2730fc 163 Gene3D G3DSA:3.30.160.70 1 69 1.5E-14 T 11-10-2018 AMS64_20370 40ad7b52031a10a59a46d0ebdd2730fc 163 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 69 4.5E-9 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMS64_20370 40ad7b52031a10a59a46d0ebdd2730fc 163 SUPERFAMILY SSF53155 1 78 3.14E-14 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMS64_20370 40ad7b52031a10a59a46d0ebdd2730fc 163 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 124 130 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMS64_20370 40ad7b52031a10a59a46d0ebdd2730fc 163 Gene3D G3DSA:1.10.10.10 73 157 5.2E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_20370 40ad7b52031a10a59a46d0ebdd2730fc 163 SUPERFAMILY SSF46767 73 154 1.83E-33 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AMS64_20370 40ad7b52031a10a59a46d0ebdd2730fc 163 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 74 153 8.9E-38 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMS64_20370 40ad7b52031a10a59a46d0ebdd2730fc 163 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 75 154 4.6E-34 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMS64_20370 40ad7b52031a10a59a46d0ebdd2730fc 163 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 154 40.614 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AMS64_15385 dcec60d37320f2177959f3d63cf9611a 471 Gene3D G3DSA:1.20.1740.10 1 444 5.5E-59 T 11-10-2018 AMS64_15385 dcec60d37320f2177959f3d63cf9611a 471 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 468 5.7E-157 T 11-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AMS64_15385 dcec60d37320f2177959f3d63cf9611a 471 PIRSF PIRSF006060 1 440 2.1E-48 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_15385 dcec60d37320f2177959f3d63cf9611a 471 Pfam PF13520 Amino acid permease 6 421 1.1E-71 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_00470 bed3b2af7b3d1a2174ec53fd5c332a68 660 Pfam PF01032 FecCD transport family 360 659 7.2E-68 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMS64_00470 bed3b2af7b3d1a2174ec53fd5c332a68 660 Pfam PF01032 FecCD transport family 21 325 1.2E-67 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMS64_00470 bed3b2af7b3d1a2174ec53fd5c332a68 660 Gene3D G3DSA:1.10.3470.10 348 660 5.3E-68 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_00470 bed3b2af7b3d1a2174ec53fd5c332a68 660 SUPERFAMILY SSF81345 347 659 3.27E-62 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_00470 bed3b2af7b3d1a2174ec53fd5c332a68 660 SUPERFAMILY SSF81345 10 327 3.27E-59 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_00470 bed3b2af7b3d1a2174ec53fd5c332a68 660 Gene3D G3DSA:1.10.3470.10 5 330 5.4E-73 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_13785 69df7c74385c4d11dc13c27212b441db 298 Pfam PF05844 YopD protein 13 297 2.4E-90 T 11-10-2018 IPR008898 YopD-like AMS64_07770 69df7c74385c4d11dc13c27212b441db 298 Pfam PF05844 YopD protein 13 297 2.4E-90 T 11-10-2018 IPR008898 YopD-like AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 SUPERFAMILY SSF53067 198 375 4.84E-47 T 11-10-2018 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 613 1.1E-266 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 330 344 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 SUPERFAMILY SSF53067 19 194 9.93E-51 T 11-10-2018 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 Gene3D G3DSA:1.20.1270.10 519 614 1.0E-23 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 Gene3D G3DSA:3.90.640.10 236 309 8.1E-108 T 11-10-2018 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 Gene3D G3DSA:2.60.34.10 377 518 5.9E-48 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 Gene3D G3DSA:3.30.420.40 192 359 8.1E-108 T 11-10-2018 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 SUPERFAMILY SSF100934 502 613 6.67E-31 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 Gene3D G3DSA:3.30.420.40 22 372 8.1E-108 T 11-10-2018 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 PRINTS PR00301 70kDa heat shock protein signature 358 378 6.4E-58 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 PRINTS PR00301 70kDa heat shock protein signature 20 33 6.4E-58 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 PRINTS PR00301 70kDa heat shock protein signature 464 480 6.4E-58 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 PRINTS PR00301 70kDa heat shock protein signature 150 170 6.4E-58 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 PRINTS PR00301 70kDa heat shock protein signature 70 78 6.4E-58 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 PRINTS PR00301 70kDa heat shock protein signature 48 60 6.4E-58 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 PRINTS PR00301 70kDa heat shock protein signature 209 219 6.4E-58 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 PRINTS PR00301 70kDa heat shock protein signature 383 402 6.4E-58 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 PRINTS PR00301 70kDa heat shock protein signature 327 343 6.4E-58 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 Pfam PF00012 Hsp70 protein 21 598 6.1E-186 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 203 216 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 SUPERFAMILY SSF100920 383 534 7.59E-48 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AMS64_11635 cd3afd6098a997bd7d0526e868ff0171 615 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 615 44.527 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AMS64_05140 20d33d7bf26c4c9c8c750d92fd1ff3c0 356 Pfam PF01476 LysM domain 60 102 2.7E-12 T 11-10-2018 IPR018392 LysM domain AMS64_05140 20d33d7bf26c4c9c8c750d92fd1ff3c0 356 Pfam PF01476 LysM domain 118 160 8.8E-13 T 11-10-2018 IPR018392 LysM domain AMS64_05140 20d33d7bf26c4c9c8c750d92fd1ff3c0 356 SUPERFAMILY SSF51261 118 353 6.28E-48 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_05140 20d33d7bf26c4c9c8c750d92fd1ff3c0 356 Pfam PF01551 Peptidase family M23 255 349 3.3E-29 T 11-10-2018 IPR016047 Peptidase M23 AMS64_05140 20d33d7bf26c4c9c8c750d92fd1ff3c0 356 SUPERFAMILY SSF54106 59 102 4.32E-10 T 11-10-2018 AMS64_05140 20d33d7bf26c4c9c8c750d92fd1ff3c0 356 Gene3D G3DSA:3.10.350.10 59 101 2.0E-14 T 11-10-2018 IPR036779 LysM domain superfamily AMS64_05140 20d33d7bf26c4c9c8c750d92fd1ff3c0 356 Gene3D G3DSA:3.10.350.10 103 167 1.1E-14 T 11-10-2018 IPR036779 LysM domain superfamily AMS64_05140 20d33d7bf26c4c9c8c750d92fd1ff3c0 356 SMART SM00257 117 161 6.6E-13 T 11-10-2018 IPR018392 LysM domain AMS64_05140 20d33d7bf26c4c9c8c750d92fd1ff3c0 356 SMART SM00257 59 103 1.3E-11 T 11-10-2018 IPR018392 LysM domain AMS64_05140 20d33d7bf26c4c9c8c750d92fd1ff3c0 356 Gene3D G3DSA:2.70.70.10 218 354 1.3E-35 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_03525 6e381e5a17353aa6a13b5e2160b9799a 263 Gene3D G3DSA:3.40.190.10 52 246 1.3E-7 T 11-10-2018 AMS64_03525 6e381e5a17353aa6a13b5e2160b9799a 263 Gene3D G3DSA:3.40.190.10 117 214 1.3E-7 T 11-10-2018 AMS64_03525 6e381e5a17353aa6a13b5e2160b9799a 263 SUPERFAMILY SSF53850 26 250 1.13E-14 T 11-10-2018 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 SUPERFAMILY SSF52935 326 478 8.37E-38 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 Gene3D G3DSA:2.40.33.10 71 169 2.6E-151 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 SUPERFAMILY SSF51621 2 342 2.87E-85 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 476 5.7E-31 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 478 6.4E-167 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 Pfam PF00224 Pyruvate kinase, barrel domain 3 341 5.5E-124 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 Gene3D G3DSA:3.40.1380.20 339 474 2.6E-151 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 SUPERFAMILY SSF50800 71 166 3.49E-23 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 Gene3D G3DSA:3.20.20.60 3 338 2.6E-151 T 11-10-2018 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 PRINTS PR01050 Pyruvate kinase family signature 316 332 8.4E-49 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 PRINTS PR01050 Pyruvate kinase family signature 60 76 8.4E-49 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 PRINTS PR01050 Pyruvate kinase family signature 272 296 8.4E-49 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 PRINTS PR01050 Pyruvate kinase family signature 220 246 8.4E-49 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 PRINTS PR01050 Pyruvate kinase family signature 187 201 8.4E-49 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 PRINTS PR01050 Pyruvate kinase family signature 297 315 8.4E-49 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_07265 45bf19adceef5ec04804cd5c19bb194f 479 PRINTS PR01050 Pyruvate kinase family signature 247 271 8.4E-49 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMS64_09445 335ee28fae63e62197fe4e74e48cb3e1 302 Pfam PF01171 PP-loop family 39 201 3.7E-14 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AMS64_09445 335ee28fae63e62197fe4e74e48cb3e1 302 Gene3D G3DSA:3.40.50.620 2 260 7.0E-48 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_09445 335ee28fae63e62197fe4e74e48cb3e1 302 SUPERFAMILY SSF52402 15 233 1.11E-53 T 11-10-2018 AMS64_09445 335ee28fae63e62197fe4e74e48cb3e1 302 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 267 58.498 T 11-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 AMS64_09445 335ee28fae63e62197fe4e74e48cb3e1 302 PIRSF PIRSF004976 2 269 1.9E-73 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AMS64_01820 549fcf819b19be118a417f382b7e16da 226 SUPERFAMILY SSF53335 2 182 7.12E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_01820 549fcf819b19be118a417f382b7e16da 226 Gene3D G3DSA:3.40.50.150 22 198 5.4E-33 T 11-10-2018 AMS64_01820 549fcf819b19be118a417f382b7e16da 226 Pfam PF13649 Methyltransferase domain 72 169 1.6E-7 T 11-10-2018 AMS64_19115 b6e871c64e46507b03b71f5060946f69 352 ProSitePatterns PS00211 ABC transporters family signature. 182 196 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_19115 b6e871c64e46507b03b71f5060946f69 352 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 260 346 6.3E-28 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_19115 b6e871c64e46507b03b71f5060946f69 352 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 261 326 2.8E-21 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_19115 b6e871c64e46507b03b71f5060946f69 352 Pfam PF00005 ABC transporter 49 209 2.6E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_19115 b6e871c64e46507b03b71f5060946f69 352 SUPERFAMILY SSF52540 58 346 1.59E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19115 b6e871c64e46507b03b71f5060946f69 352 Gene3D G3DSA:3.40.50.300 27 351 1.8E-106 T 11-10-2018 AMS64_19115 b6e871c64e46507b03b71f5060946f69 352 SMART SM00382 58 259 1.2E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_07255 7ce1eaf20fb61c8c27635db904bfba60 322 Pfam PF02685 Glucokinase 7 316 6.5E-119 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMS64_07255 7ce1eaf20fb61c8c27635db904bfba60 322 TIGRFAM TIGR00749 glk: glucokinase 7 311 3.0E-130 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMS64_07255 7ce1eaf20fb61c8c27635db904bfba60 322 SUPERFAMILY SSF53067 6 317 1.0E-63 T 11-10-2018 AMS64_07255 7ce1eaf20fb61c8c27635db904bfba60 322 Gene3D G3DSA:3.30.420.40 7 309 6.6E-115 T 11-10-2018 AMS64_07255 7ce1eaf20fb61c8c27635db904bfba60 322 Hamap MF_00524 Glucokinase [glk]. 5 317 34.862 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMS64_07255 7ce1eaf20fb61c8c27635db904bfba60 322 Gene3D G3DSA:3.40.367.20 101 300 6.6E-115 T 11-10-2018 AMS64_19805 78d8510a1f65529137c4a3bcced78cfb 439 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 438 2.8E-173 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AMS64_19805 78d8510a1f65529137c4a3bcced78cfb 439 PIRSF PIRSF004539 1 439 2.3E-165 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AMS64_19805 78d8510a1f65529137c4a3bcced78cfb 439 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 371 2.1E-144 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 1.1E-18 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 Gene3D G3DSA:2.40.30.130 466 551 1.7E-11 T 11-10-2018 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 Gene3D G3DSA:3.10.310.40 763 871 5.6E-34 T 11-10-2018 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 SUPERFAMILY SSF50447 454 551 8.12E-18 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 853 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 SMART SM00863 652 695 5.9E-23 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 1.5E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 1.5E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.5E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 1.5E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 1.5E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.8E-221 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 Gene3D G3DSA:3.30.930.10 2 250 5.5E-121 T 11-10-2018 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 Gene3D G3DSA:3.30.980.10 562 696 1.0E-50 T 11-10-2018 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 SUPERFAMILY SSF101353 254 463 9.15E-57 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 SUPERFAMILY SSF55681 3 253 6.46E-108 T 11-10-2018 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 Pfam PF02272 DHHA1 domain 731 870 8.2E-30 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 SUPERFAMILY SSF55186 551 707 2.22E-51 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 Gene3D G3DSA:3.30.54.20 623 676 1.0E-50 T 11-10-2018 AMS64_03580 2feab5a9db258d4f5c55f3076195b735 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 197.986 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AMS64_17770 d5c37a6686174adad79db41399469e5f 517 Gene3D G3DSA:1.10.10.10 4 106 6.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_17770 d5c37a6686174adad79db41399469e5f 517 SMART SM00862 24 100 5.9E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_17770 d5c37a6686174adad79db41399469e5f 517 Gene3D G3DSA:1.25.40.10 353 511 2.8E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_17770 d5c37a6686174adad79db41399469e5f 517 SUPERFAMILY SSF46894 2 102 2.61E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_17770 d5c37a6686174adad79db41399469e5f 517 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 1.6E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_08360 a0964b9cd57233de8e3c25975cfff2aa 199 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 38 180 5.8E-61 T 11-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 AMS64_08360 a0964b9cd57233de8e3c25975cfff2aa 199 Gene3D G3DSA:3.90.10.10 132 194 3.1E-6 T 11-10-2018 AMS64_08360 a0964b9cd57233de8e3c25975cfff2aa 199 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 144 180 8.3E-5 T 11-10-2018 IPR010177 Doubled CXXCH motif AMS64_08360 a0964b9cd57233de8e3c25975cfff2aa 199 Gene3D G3DSA:3.90.10.10 12 131 1.3E-5 T 11-10-2018 AMS64_08360 a0964b9cd57233de8e3c25975cfff2aa 199 SUPERFAMILY SSF48695 12 185 5.35E-26 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AMS64_08360 a0964b9cd57233de8e3c25975cfff2aa 199 Pfam PF13435 Cytochrome c554 and c-prime 45 84 0.0078 T 11-10-2018 IPR023155 Cytochrome c-552/4 AMS64_06425 50b0380b9ed6df089d4a9b577da0acb5 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06425 50b0380b9ed6df089d4a9b577da0acb5 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06425 50b0380b9ed6df089d4a9b577da0acb5 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06425 50b0380b9ed6df089d4a9b577da0acb5 289 Pfam PF00106 short chain dehydrogenase 6 191 7.3E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06425 50b0380b9ed6df089d4a9b577da0acb5 289 Gene3D G3DSA:3.40.50.720 1 260 2.0E-57 T 11-10-2018 AMS64_06425 50b0380b9ed6df089d4a9b577da0acb5 289 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_06425 50b0380b9ed6df089d4a9b577da0acb5 289 SUPERFAMILY SSF51735 1 259 1.12E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_06425 50b0380b9ed6df089d4a9b577da0acb5 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.1E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06425 50b0380b9ed6df089d4a9b577da0acb5 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.1E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06425 50b0380b9ed6df089d4a9b577da0acb5 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.1E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06425 50b0380b9ed6df089d4a9b577da0acb5 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.1E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06425 50b0380b9ed6df089d4a9b577da0acb5 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 4.1E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_05125 44ce3aa81dff771f3f9e08edaa824101 253 SUPERFAMILY SSF64167 1 249 1.57E-85 T 11-10-2018 AMS64_05125 44ce3aa81dff771f3f9e08edaa824101 253 Gene3D G3DSA:3.40.1210.10 1 252 3.4E-98 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AMS64_05125 44ce3aa81dff771f3f9e08edaa824101 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 237 1.9E-76 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AMS64_05125 44ce3aa81dff771f3f9e08edaa824101 253 Pfam PF01975 Survival protein SurE 3 186 5.1E-62 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AMS64_05125 44ce3aa81dff771f3f9e08edaa824101 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 252 41.013 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AMS64_17070 d1f804644f0d545117b544cd2db5f948 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_17070 d1f804644f0d545117b544cd2db5f948 429 Gene3D G3DSA:3.40.640.10 62 321 5.8E-163 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_17070 d1f804644f0d545117b544cd2db5f948 429 PIRSF PIRSF000521 127 427 2.2E-41 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_17070 d1f804644f0d545117b544cd2db5f948 429 PIRSF PIRSF000521 17 134 2.4E-5 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_17070 d1f804644f0d545117b544cd2db5f948 429 Gene3D G3DSA:3.90.1150.10 11 420 5.8E-163 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_17070 d1f804644f0d545117b544cd2db5f948 429 SUPERFAMILY SSF53383 25 425 1.77E-134 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_17070 d1f804644f0d545117b544cd2db5f948 429 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 13 425 6.5E-174 T 11-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 AMS64_17070 d1f804644f0d545117b544cd2db5f948 429 Pfam PF00202 Aminotransferase class-III 26 423 1.6E-130 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_11720 37845280d67fb5c8e0eec638ac15535d 350 SUPERFAMILY SSF111337 1 343 2.22E-138 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AMS64_11720 37845280d67fb5c8e0eec638ac15535d 350 Pfam PF02547 Queuosine biosynthesis protein 3 343 9.6E-134 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AMS64_11720 37845280d67fb5c8e0eec638ac15535d 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 343 4.4E-156 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AMS64_11720 37845280d67fb5c8e0eec638ac15535d 350 Gene3D G3DSA:2.40.10.240 64 161 5.6E-116 T 11-10-2018 AMS64_11720 37845280d67fb5c8e0eec638ac15535d 350 Gene3D G3DSA:3.40.1780.10 14 343 5.6E-116 T 11-10-2018 AMS64_11720 37845280d67fb5c8e0eec638ac15535d 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.379 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AMS64_03890 e6e36e6e6866c1f5afba89010d3913dd 440 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 90 438 2.6E-100 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AMS64_03890 e6e36e6e6866c1f5afba89010d3913dd 440 Gene3D G3DSA:3.60.120.10 3 440 7.0E-124 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AMS64_03890 e6e36e6e6866c1f5afba89010d3913dd 440 SUPERFAMILY SSF56322 18 440 5.36E-93 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AMS64_03890 e6e36e6e6866c1f5afba89010d3913dd 440 Pfam PF00425 chorismate binding enzyme 177 431 1.7E-64 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AMS64_03890 e6e36e6e6866c1f5afba89010d3913dd 440 Hamap MF_01935 Isochorismate synthase MenF [menF]. 2 440 29.631 T 11-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AMS64_13200 24090c4f9e2424c44e644b5bde4c1d3c 240 SUPERFAMILY SSF56214 105 209 3.66E-21 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMS64_13200 24090c4f9e2424c44e644b5bde4c1d3c 240 Gene3D G3DSA:3.90.470.20 19 105 3.1E-39 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMS64_13200 24090c4f9e2424c44e644b5bde4c1d3c 240 Gene3D G3DSA:3.90.470.20 106 202 3.1E-39 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMS64_13200 24090c4f9e2424c44e644b5bde4c1d3c 240 SUPERFAMILY SSF56214 19 97 2.56E-18 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMS64_13200 24090c4f9e2424c44e644b5bde4c1d3c 240 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 106 191 1.3E-13 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMS64_11175 c757eede13dac26ec2f1f12a43b70ab7 238 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 5 231 38.473 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AMS64_11175 c757eede13dac26ec2f1f12a43b70ab7 238 SUPERFAMILY SSF55729 81 233 1.42E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_11175 c757eede13dac26ec2f1f12a43b70ab7 238 PIRSF PIRSF037208 1 238 1.7E-84 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AMS64_11175 c757eede13dac26ec2f1f12a43b70ab7 238 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 104 225 1.5E-36 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AMS64_11175 c757eede13dac26ec2f1f12a43b70ab7 238 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 15 85 5.0E-18 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AMS64_15445 21414f7af611b016ef813ddc4eda9cca 247 Gene3D G3DSA:1.10.8.60 181 247 5.3E-26 T 11-10-2018 AMS64_15445 21414f7af611b016ef813ddc4eda9cca 247 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 57 77 9.2E-5 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMS64_15445 21414f7af611b016ef813ddc4eda9cca 247 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 145 172 9.2E-5 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMS64_15445 21414f7af611b016ef813ddc4eda9cca 247 Pfam PF00308 Bacterial dnaA protein 32 226 3.2E-14 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AMS64_15445 21414f7af611b016ef813ddc4eda9cca 247 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 20 246 9.6E-88 T 11-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 AMS64_15445 21414f7af611b016ef813ddc4eda9cca 247 Gene3D G3DSA:3.40.50.300 8 177 4.1E-34 T 11-10-2018 AMS64_15445 21414f7af611b016ef813ddc4eda9cca 247 SUPERFAMILY SSF52540 36 225 4.46E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_06445 b906072ef818e2aedcbca397b5affd57 215 SUPERFAMILY SSF53335 60 195 1.52E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_06445 b906072ef818e2aedcbca397b5affd57 215 Pfam PF13489 Methyltransferase domain 64 198 2.4E-23 T 11-10-2018 AMS64_06445 b906072ef818e2aedcbca397b5affd57 215 Gene3D G3DSA:3.40.50.150 46 201 1.3E-16 T 11-10-2018 AMS64_14380 93cd036f6289bc9362975312ad9e195f 299 SUPERFAMILY SSF51430 8 296 4.58E-74 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMS64_14380 93cd036f6289bc9362975312ad9e195f 299 Gene3D G3DSA:3.20.20.100 1 299 1.5E-107 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMS64_14380 93cd036f6289bc9362975312ad9e195f 299 Pfam PF00248 Aldo/keto reductase family 17 292 1.7E-59 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMS64_14380 93cd036f6289bc9362975312ad9e195f 299 PRINTS PR00069 Aldo-keto reductase signature 113 131 5.4E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMS64_14380 93cd036f6289bc9362975312ad9e195f 299 PRINTS PR00069 Aldo-keto reductase signature 144 161 5.4E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMS64_22200 50296bf8d8e0538b2b8f1a0c52dfe295 630 Gene3D G3DSA:3.30.450.20 64 171 8.7E-55 T 11-10-2018 AMS64_22200 50296bf8d8e0538b2b8f1a0c52dfe295 630 Gene3D G3DSA:3.30.450.20 52 272 8.7E-55 T 11-10-2018 AMS64_22200 50296bf8d8e0538b2b8f1a0c52dfe295 630 Gene3D G3DSA:1.10.287.950 300 630 2.1E-72 T 11-10-2018 AMS64_22200 50296bf8d8e0538b2b8f1a0c52dfe295 630 SUPERFAMILY SSF103190 63 178 3.77E-12 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMS64_22200 50296bf8d8e0538b2b8f1a0c52dfe295 630 SMART SM00304 299 353 2.7E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_22200 50296bf8d8e0538b2b8f1a0c52dfe295 630 Pfam PF02743 Cache domain 51 261 1.9E-29 T 11-10-2018 IPR033479 Double Cache domain 1 AMS64_22200 50296bf8d8e0538b2b8f1a0c52dfe295 630 SMART SM00283 368 629 8.0E-67 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_22200 50296bf8d8e0538b2b8f1a0c52dfe295 630 SUPERFAMILY SSF58104 321 630 3.27E-77 T 11-10-2018 AMS64_22200 50296bf8d8e0538b2b8f1a0c52dfe295 630 Pfam PF00672 HAMP domain 305 349 4.0E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_22200 50296bf8d8e0538b2b8f1a0c52dfe295 630 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 440 596 5.1E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_18160 94f3ccbeb8e13e054034b13bd475f87b 364 Pfam PF01728 FtsJ-like methyltransferase 185 256 1.1E-6 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMS64_18160 94f3ccbeb8e13e054034b13bd475f87b 364 Gene3D G3DSA:3.40.50.150 175 356 1.4E-51 T 11-10-2018 AMS64_18160 94f3ccbeb8e13e054034b13bd475f87b 364 Gene3D G3DSA:3.30.2300.20 80 174 2.1E-34 T 11-10-2018 AMS64_18160 94f3ccbeb8e13e054034b13bd475f87b 364 PIRSF PIRSF028774 1 359 1.1E-169 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AMS64_18160 94f3ccbeb8e13e054034b13bd475f87b 364 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 354 83.927 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AMS64_18160 94f3ccbeb8e13e054034b13bd475f87b 364 Gene3D G3DSA:3.30.70.2810 1 79 2.1E-31 T 11-10-2018 AMS64_18160 94f3ccbeb8e13e054034b13bd475f87b 364 SUPERFAMILY SSF53335 183 312 1.59E-11 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_18810 ae96e3baeaeb0717bf44cb81ec1f963e 281 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_18810 ae96e3baeaeb0717bf44cb81ec1f963e 281 SUPERFAMILY SSF51717 6 271 7.98E-105 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_18810 ae96e3baeaeb0717bf44cb81ec1f963e 281 Pfam PF00809 Pterin binding enzyme 18 257 7.9E-86 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_18810 ae96e3baeaeb0717bf44cb81ec1f963e 281 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 268 7.7E-101 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AMS64_18810 ae96e3baeaeb0717bf44cb81ec1f963e 281 Gene3D G3DSA:3.20.20.20 1 276 5.9E-108 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_18810 ae96e3baeaeb0717bf44cb81ec1f963e 281 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMS64_05670 1e73a2f23fa439a4f290e05bdb09f3f9 266 SUPERFAMILY SSF53335 4 248 1.29E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_05670 1e73a2f23fa439a4f290e05bdb09f3f9 266 Pfam PF13649 Methyltransferase domain 89 156 9.7E-7 T 11-10-2018 AMS64_05670 1e73a2f23fa439a4f290e05bdb09f3f9 266 Gene3D G3DSA:3.40.50.150 1 266 7.6E-44 T 11-10-2018 AMS64_05670 1e73a2f23fa439a4f290e05bdb09f3f9 266 PIRSF PIRSF018249 1 265 6.5E-47 T 11-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AMS64_19170 70831e80f81a8f5d23efdb254b08fcaf 555 Pfam PF00005 ABC transporter 22 191 6.4E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_19170 70831e80f81a8f5d23efdb254b08fcaf 555 Pfam PF00005 ABC transporter 340 473 1.2E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_19170 70831e80f81a8f5d23efdb254b08fcaf 555 SUPERFAMILY SSF52540 302 528 8.51E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19170 70831e80f81a8f5d23efdb254b08fcaf 555 SUPERFAMILY SSF52540 11 243 6.66E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19170 70831e80f81a8f5d23efdb254b08fcaf 555 Gene3D G3DSA:3.40.50.300 286 555 2.9E-77 T 11-10-2018 AMS64_19170 70831e80f81a8f5d23efdb254b08fcaf 555 Pfam PF12848 ABC transporter 230 303 1.8E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain AMS64_19170 70831e80f81a8f5d23efdb254b08fcaf 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 1.6E-296 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 AMS64_19170 70831e80f81a8f5d23efdb254b08fcaf 555 SMART SM00382 31 236 2.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_19170 70831e80f81a8f5d23efdb254b08fcaf 555 SMART SM00382 348 521 1.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_19170 70831e80f81a8f5d23efdb254b08fcaf 555 Gene3D G3DSA:3.40.50.300 1 285 3.2E-88 T 11-10-2018 AMS64_19170 70831e80f81a8f5d23efdb254b08fcaf 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_01990 7a1dc7c416a51b672568e6078ebb6f89 237 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.8E-99 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMS64_01990 7a1dc7c416a51b672568e6078ebb6f89 237 SUPERFAMILY SSF54814 2 106 1.05E-37 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMS64_01990 7a1dc7c416a51b672568e6078ebb6f89 237 Pfam PF07650 KH domain 39 111 1.5E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01990 7a1dc7c416a51b672568e6078ebb6f89 237 Gene3D G3DSA:3.30.300.20 17 107 3.8E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMS64_01990 7a1dc7c416a51b672568e6078ebb6f89 237 SUPERFAMILY SSF54821 108 206 2.35E-40 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01990 7a1dc7c416a51b672568e6078ebb6f89 237 SMART SM00322 60 125 4.4E-7 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AMS64_01990 7a1dc7c416a51b672568e6078ebb6f89 237 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01990 7a1dc7c416a51b672568e6078ebb6f89 237 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 7.7E-42 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01990 7a1dc7c416a51b672568e6078ebb6f89 237 Gene3D G3DSA:3.30.1140.32 108 208 2.3E-45 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01990 7a1dc7c416a51b672568e6078ebb6f89 237 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.143 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMS64_13935 eb2e5de46a1cf33737ed696fe8436ca0 714 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 58 - T 11-10-2018 IPR010916 TonB box, conserved site AMS64_13935 eb2e5de46a1cf33737ed696fe8436ca0 714 Pfam PF00593 TonB dependent receptor 267 713 7.2E-48 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMS64_13935 eb2e5de46a1cf33737ed696fe8436ca0 714 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 714 2.0E-156 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AMS64_13935 eb2e5de46a1cf33737ed696fe8436ca0 714 Gene3D G3DSA:2.40.170.20 199 714 1.5E-113 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMS64_13935 eb2e5de46a1cf33737ed696fe8436ca0 714 SUPERFAMILY SSF56935 41 714 2.23E-120 T 11-10-2018 AMS64_13935 eb2e5de46a1cf33737ed696fe8436ca0 714 Gene3D G3DSA:2.170.130.10 66 187 2.7E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMS64_13935 eb2e5de46a1cf33737ed696fe8436ca0 714 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 179 6.8E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMS64_10230 aeb609b0927e8ea910b0d915365c4bd9 199 Gene3D G3DSA:3.30.70.20 6 180 1.1E-28 T 11-10-2018 AMS64_10230 aeb609b0927e8ea910b0d915365c4bd9 199 Gene3D G3DSA:3.30.70.20 81 147 1.1E-28 T 11-10-2018 AMS64_10230 aeb609b0927e8ea910b0d915365c4bd9 199 Pfam PF12838 4Fe-4S dicluster domain 105 168 2.2E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_10230 aeb609b0927e8ea910b0d915365c4bd9 199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 106 117 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_10230 aeb609b0927e8ea910b0d915365c4bd9 199 SUPERFAMILY SSF54862 2 183 2.23E-42 T 11-10-2018 AMS64_19940 ef379df2079851ead9d6312a43847be3 615 SUPERFAMILY SSF48452 262 372 4.14E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_19940 ef379df2079851ead9d6312a43847be3 615 SUPERFAMILY SSF55073 460 612 2.43E-48 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_19940 ef379df2079851ead9d6312a43847be3 615 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 453 613 1.7E-48 T 11-10-2018 IPR000160 GGDEF domain AMS64_19940 ef379df2079851ead9d6312a43847be3 615 Pfam PF00990 Diguanylate cyclase, GGDEF domain 455 610 2.6E-44 T 11-10-2018 IPR000160 GGDEF domain AMS64_19940 ef379df2079851ead9d6312a43847be3 615 Gene3D G3DSA:1.25.40.10 58 427 5.5E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_19940 ef379df2079851ead9d6312a43847be3 615 Pfam PF13424 Tetratricopeptide repeat 186 255 3.2E-9 T 11-10-2018 AMS64_19940 ef379df2079851ead9d6312a43847be3 615 SUPERFAMILY SSF48452 145 295 6.83E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_19940 ef379df2079851ead9d6312a43847be3 615 SMART SM00028 344 377 130.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_19940 ef379df2079851ead9d6312a43847be3 615 SMART SM00028 104 137 34.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_19940 ef379df2079851ead9d6312a43847be3 615 SMART SM00028 184 217 49.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_19940 ef379df2079851ead9d6312a43847be3 615 SMART SM00028 144 177 200.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_19940 ef379df2079851ead9d6312a43847be3 615 SMART SM00028 224 257 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_19940 ef379df2079851ead9d6312a43847be3 615 SUPERFAMILY SSF48452 69 177 9.48E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_19940 ef379df2079851ead9d6312a43847be3 615 SMART SM00267 444 614 1.1E-57 T 11-10-2018 IPR000160 GGDEF domain AMS64_19940 ef379df2079851ead9d6312a43847be3 615 Gene3D G3DSA:3.30.70.270 443 612 4.1E-57 T 11-10-2018 AMS64_18880 e60aa5cacb7c98bdec5d5d88fc5fb373 574 SUPERFAMILY SSF52540 3 253 7.87E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_18880 e60aa5cacb7c98bdec5d5d88fc5fb373 574 ProSitePatterns PS00211 ABC transporters family signature. 456 470 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_18880 e60aa5cacb7c98bdec5d5d88fc5fb373 574 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_18880 e60aa5cacb7c98bdec5d5d88fc5fb373 574 SUPERFAMILY SSF52540 318 554 8.56E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_18880 e60aa5cacb7c98bdec5d5d88fc5fb373 574 SMART SM00382 339 539 1.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_18880 e60aa5cacb7c98bdec5d5d88fc5fb373 574 SMART SM00382 32 231 1.4E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_18880 e60aa5cacb7c98bdec5d5d88fc5fb373 574 Gene3D G3DSA:3.40.50.300 301 573 1.3E-85 T 11-10-2018 AMS64_18880 e60aa5cacb7c98bdec5d5d88fc5fb373 574 Gene3D G3DSA:3.40.50.300 1 287 5.0E-83 T 11-10-2018 AMS64_18880 e60aa5cacb7c98bdec5d5d88fc5fb373 574 Pfam PF00005 ABC transporter 24 181 3.7E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_18880 e60aa5cacb7c98bdec5d5d88fc5fb373 574 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 535 567 0.0038 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_18880 e60aa5cacb7c98bdec5d5d88fc5fb373 574 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 263 3.7E-5 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_18880 e60aa5cacb7c98bdec5d5d88fc5fb373 574 Pfam PF00005 ABC transporter 331 484 3.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_21450 b6e7236b897390494aad9a4e547c9e98 642 Pfam PF00990 Diguanylate cyclase, GGDEF domain 222 376 3.3E-18 T 11-10-2018 IPR000160 GGDEF domain AMS64_21450 b6e7236b897390494aad9a4e547c9e98 642 Gene3D G3DSA:3.20.20.450 393 638 6.5E-46 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_21450 b6e7236b897390494aad9a4e547c9e98 642 SMART SM00267 211 381 2.8E-11 T 11-10-2018 IPR000160 GGDEF domain AMS64_21450 b6e7236b897390494aad9a4e547c9e98 642 Gene3D G3DSA:3.30.70.270 205 382 9.4E-20 T 11-10-2018 AMS64_21450 b6e7236b897390494aad9a4e547c9e98 642 SUPERFAMILY SSF55073 227 383 1.02E-14 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_21450 b6e7236b897390494aad9a4e547c9e98 642 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 220 379 1.1E-11 T 11-10-2018 IPR000160 GGDEF domain AMS64_21450 b6e7236b897390494aad9a4e547c9e98 642 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 34 127 6.8E-20 T 11-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 AMS64_21450 b6e7236b897390494aad9a4e547c9e98 642 SMART SM00052 393 637 9.8E-26 T 11-10-2018 IPR001633 EAL domain AMS64_21450 b6e7236b897390494aad9a4e547c9e98 642 Pfam PF00563 EAL domain 402 632 1.2E-47 T 11-10-2018 IPR001633 EAL domain AMS64_21450 b6e7236b897390494aad9a4e547c9e98 642 SUPERFAMILY SSF141868 401 633 4.58E-47 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_16040 f0ab572d4c7559fcfe9c3eafa51bfcf4 398 Gene3D G3DSA:3.40.190.10 168 394 4.0E-19 T 11-10-2018 AMS64_16040 f0ab572d4c7559fcfe9c3eafa51bfcf4 398 Pfam PF13416 Bacterial extracellular solute-binding protein 76 354 3.3E-23 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMS64_16040 f0ab572d4c7559fcfe9c3eafa51bfcf4 398 SUPERFAMILY SSF53850 48 396 1.4E-35 T 11-10-2018 AMS64_16040 f0ab572d4c7559fcfe9c3eafa51bfcf4 398 Gene3D G3DSA:3.40.190.10 84 370 4.0E-19 T 11-10-2018 AMS64_16040 f0ab572d4c7559fcfe9c3eafa51bfcf4 398 PIRSF PIRSF029172 12 398 5.3E-148 T 11-10-2018 IPR027020 Protein ynjB AMS64_12475 f1ab57eb32955cd3e6b4a3148e0c6c06 392 Gene3D G3DSA:1.20.1250.20 2 193 1.7E-26 T 11-10-2018 AMS64_12475 f1ab57eb32955cd3e6b4a3148e0c6c06 392 Pfam PF07690 Major Facilitator Superfamily 9 319 1.6E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_12475 f1ab57eb32955cd3e6b4a3148e0c6c06 392 PRINTS PR01035 Tetracycline resistance protein signature 158 178 7.0E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMS64_12475 f1ab57eb32955cd3e6b4a3148e0c6c06 392 PRINTS PR01035 Tetracycline resistance protein signature 40 59 7.0E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMS64_12475 f1ab57eb32955cd3e6b4a3148e0c6c06 392 PRINTS PR01035 Tetracycline resistance protein signature 10 26 7.0E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMS64_12475 f1ab57eb32955cd3e6b4a3148e0c6c06 392 PRINTS PR01035 Tetracycline resistance protein signature 98 119 7.0E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMS64_12475 f1ab57eb32955cd3e6b4a3148e0c6c06 392 SUPERFAMILY SSF103473 3 379 1.12E-62 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_12475 f1ab57eb32955cd3e6b4a3148e0c6c06 392 Gene3D G3DSA:1.20.1250.20 194 385 8.8E-23 T 11-10-2018 AMS64_18825 979f92265bec0c84ab503d04129e1da2 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 7.3E-33 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 AMS64_18825 979f92265bec0c84ab503d04129e1da2 98 SUPERFAMILY SSF75471 1 95 2.62E-29 T 11-10-2018 IPR035920 YhbY-like superfamily AMS64_18825 979f92265bec0c84ab503d04129e1da2 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 8.0E-34 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AMS64_18825 979f92265bec0c84ab503d04129e1da2 98 Gene3D G3DSA:3.30.110.60 1 98 1.3E-33 T 11-10-2018 IPR035920 YhbY-like superfamily AMS64_18825 979f92265bec0c84ab503d04129e1da2 98 SMART SM01103 3 86 4.3E-38 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AMS64_18825 979f92265bec0c84ab503d04129e1da2 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 3.5E-20 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AMS64_20985 d0d2b5fb01170424e271acb2acf63e6a 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 5.1E-32 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_20985 d0d2b5fb01170424e271acb2acf63e6a 70 Gene3D G3DSA:2.40.50.140 1 68 2.1E-30 T 11-10-2018 AMS64_20985 d0d2b5fb01170424e271acb2acf63e6a 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 11-10-2018 IPR019844 Cold-shock conserved site AMS64_20985 d0d2b5fb01170424e271acb2acf63e6a 70 PRINTS PR00050 Cold shock protein signature 28 37 7.2E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_20985 d0d2b5fb01170424e271acb2acf63e6a 70 PRINTS PR00050 Cold shock protein signature 43 61 7.2E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_20985 d0d2b5fb01170424e271acb2acf63e6a 70 PRINTS PR00050 Cold shock protein signature 7 22 7.2E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_20985 d0d2b5fb01170424e271acb2acf63e6a 70 SMART SM00357 6 70 1.4E-29 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMS64_20985 d0d2b5fb01170424e271acb2acf63e6a 70 PIRSF PIRSF002599 1 70 2.3E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMS64_20985 d0d2b5fb01170424e271acb2acf63e6a 70 SUPERFAMILY SSF50249 3 68 1.7E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_17700 e5da32d45427d63760a213dc116372b8 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 80 1.2E-8 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMS64_17700 e5da32d45427d63760a213dc116372b8 208 Gene3D G3DSA:3.40.30.10 11 191 7.3E-39 T 11-10-2018 AMS64_17700 e5da32d45427d63760a213dc116372b8 208 Gene3D G3DSA:1.20.1050.10 83 186 7.3E-39 T 11-10-2018 AMS64_17700 e5da32d45427d63760a213dc116372b8 208 SUPERFAMILY SSF52833 6 91 6.73E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_17700 e5da32d45427d63760a213dc116372b8 208 SUPERFAMILY SSF47616 82 193 1.2E-7 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 Gene3D G3DSA:3.40.120.10 256 338 1.9E-64 T 11-10-2018 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 SUPERFAMILY SSF53738 257 364 2.0E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 Gene3D G3DSA:3.30.310.50 369 444 9.5E-26 T 11-10-2018 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 Gene3D G3DSA:3.40.120.10 174 361 1.9E-64 T 11-10-2018 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 SUPERFAMILY SSF53738 155 255 5.1E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 443 47.914 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 SUPERFAMILY SSF55957 356 443 6.15E-22 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 365 1.6E-32 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 441 2.5E-196 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 SUPERFAMILY SSF53738 2 180 3.45E-49 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 Gene3D G3DSA:3.40.120.10 2 153 6.6E-50 T 11-10-2018 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 3.4E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 135 7.2E-46 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 440 2.3E-14 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 6.8E-14 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 6.8E-14 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_18805 93fd4eac4ddda32f75fb6e1cfe13b386 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 6.8E-14 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_10660 4b83d54d0b1a709e61a0794b33ed937e 300 Gene3D G3DSA:1.10.1040.10 166 298 6.4E-46 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMS64_10660 4b83d54d0b1a709e61a0794b33ed937e 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 163 4.8E-51 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AMS64_10660 4b83d54d0b1a709e61a0794b33ed937e 300 SUPERFAMILY SSF51735 3 163 6.34E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_10660 4b83d54d0b1a709e61a0794b33ed937e 300 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 293 4.7E-125 T 11-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AMS64_10660 4b83d54d0b1a709e61a0794b33ed937e 300 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AMS64_10660 4b83d54d0b1a709e61a0794b33ed937e 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 293 1.7E-36 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMS64_10660 4b83d54d0b1a709e61a0794b33ed937e 300 PIRSF PIRSF000103 1 300 4.8E-77 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AMS64_10660 4b83d54d0b1a709e61a0794b33ed937e 300 Gene3D G3DSA:3.40.50.720 1 164 1.1E-54 T 11-10-2018 AMS64_10660 4b83d54d0b1a709e61a0794b33ed937e 300 SUPERFAMILY SSF48179 165 293 8.96E-41 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_05385 ab6a70f9c559c40f8f445817255a3a91 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMS64_05385 ab6a70f9c559c40f8f445817255a3a91 359 PIRSF PIRSF001359 14 359 1.7E-96 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMS64_05385 ab6a70f9c559c40f8f445817255a3a91 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 18 355 7.6E-89 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMS64_05385 ab6a70f9c559c40f8f445817255a3a91 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 15 357 1.9E-112 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMS64_05385 ab6a70f9c559c40f8f445817255a3a91 359 Gene3D G3DSA:3.20.20.70 3 359 1.2E-147 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_05385 ab6a70f9c559c40f8f445817255a3a91 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 5 358 4.8E-184 T 11-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AMS64_05385 ab6a70f9c559c40f8f445817255a3a91 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMS64_05385 ab6a70f9c559c40f8f445817255a3a91 359 SUPERFAMILY SSF51569 5 357 1.79E-129 T 11-10-2018 AMS64_18240 10fcb3ee2652b5bf83cfae22da8473a6 447 Pfam PF11973 NQRA C-terminal domain 262 311 1.4E-21 T 11-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 AMS64_18240 10fcb3ee2652b5bf83cfae22da8473a6 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 5.0E-110 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AMS64_18240 10fcb3ee2652b5bf83cfae22da8473a6 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 2.2E-183 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AMS64_18240 10fcb3ee2652b5bf83cfae22da8473a6 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 45.41 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AMS64_14760 5d240dd97e16a00e76602a943bcd8a01 77 Pfam PF01206 Sulfurtransferase TusA 3 65 4.6E-16 T 11-10-2018 IPR001455 TusA-like domain AMS64_14760 5d240dd97e16a00e76602a943bcd8a01 77 SUPERFAMILY SSF64307 1 67 2.62E-16 T 11-10-2018 IPR036868 TusA-like domain superfamily AMS64_14760 5d240dd97e16a00e76602a943bcd8a01 77 Gene3D G3DSA:3.30.110.40 1 71 1.5E-12 T 11-10-2018 IPR036868 TusA-like domain superfamily AMS64_00200 78c35fd941bf73cbc297767104568f4c 395 Gene3D G3DSA:3.40.50.720 1 392 2.2E-162 T 11-10-2018 AMS64_00200 78c35fd941bf73cbc297767104568f4c 395 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 391 50.205 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_00200 78c35fd941bf73cbc297767104568f4c 395 Pfam PF07055 Enoyl reductase FAD binding domain 323 385 2.7E-24 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_00200 78c35fd941bf73cbc297767104568f4c 395 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 78 8.8E-34 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_00200 78c35fd941bf73cbc297767104568f4c 395 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 83 315 4.8E-101 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_00200 78c35fd941bf73cbc297767104568f4c 395 SUPERFAMILY SSF51735 41 141 7.24E-5 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_14600 6a61e35e757283d22d332827a94d3d10 153 SUPERFAMILY SSF54637 15 145 1.19E-31 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_14600 6a61e35e757283d22d332827a94d3d10 153 Gene3D G3DSA:3.10.129.10 5 150 3.5E-59 T 11-10-2018 AMS64_14600 6a61e35e757283d22d332827a94d3d10 153 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 140 5.0E-39 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AMS64_14600 6a61e35e757283d22d332827a94d3d10 153 Pfam PF03061 Thioesterase superfamily 57 133 1.1E-15 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMS64_14480 69bd4e31169de6eb7d831166aadd8448 805 SUPERFAMILY SSF55486 234 516 3.11E-28 T 11-10-2018 AMS64_14480 69bd4e31169de6eb7d831166aadd8448 805 SUPERFAMILY SSF49785 657 752 2.17E-12 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AMS64_14480 69bd4e31169de6eb7d831166aadd8448 805 Pfam PF01483 Proprotein convertase P-domain 667 752 2.6E-13 T 11-10-2018 IPR002884 P domain GO:0004252|GO:0006508 AMS64_14480 69bd4e31169de6eb7d831166aadd8448 805 Gene3D G3DSA:2.60.120.260 637 767 2.9E-9 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AMS64_21755 16ab293ac98d70ccad7b66e3bd578dca 233 SUPERFAMILY SSF56808 6 225 2.22E-81 T 11-10-2018 IPR023674 Ribosomal protein L1-like AMS64_21755 16ab293ac98d70ccad7b66e3bd578dca 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.924 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMS64_21755 16ab293ac98d70ccad7b66e3bd578dca 233 Gene3D G3DSA:3.40.50.790 68 159 1.1E-79 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AMS64_21755 16ab293ac98d70ccad7b66e3bd578dca 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 3.4E-106 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMS64_21755 16ab293ac98d70ccad7b66e3bd578dca 233 Gene3D G3DSA:3.30.190.20 21 225 1.1E-79 T 11-10-2018 AMS64_21755 16ab293ac98d70ccad7b66e3bd578dca 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_21755 16ab293ac98d70ccad7b66e3bd578dca 233 PIRSF PIRSF002155 1 227 7.6E-78 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_21755 16ab293ac98d70ccad7b66e3bd578dca 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 5.9E-50 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AMS64_06010 5cf1ed5fac2ecec7d0517fecada0263b 393 SUPERFAMILY SSF53383 2 392 7.35E-109 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_06010 5cf1ed5fac2ecec7d0517fecada0263b 393 Pfam PF00155 Aminotransferase class I and II 43 385 1.5E-37 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMS64_06010 5cf1ed5fac2ecec7d0517fecada0263b 393 Gene3D G3DSA:3.90.1150.10 17 389 2.8E-134 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_06010 5cf1ed5fac2ecec7d0517fecada0263b 393 Gene3D G3DSA:3.40.640.10 64 283 2.8E-134 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 Gene3D G3DSA:3.40.50.920 539 663 8.8E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 525 2.5E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 SMART SM00861 355 526 4.1E-69 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 Gene3D G3DSA:3.40.50.970 2 326 2.2E-132 T 11-10-2018 AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 SUPERFAMILY SSF52922 534 662 5.37E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 SUPERFAMILY SSF52518 347 528 2.05E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 Pfam PF02780 Transketolase, C-terminal domain 541 656 1.9E-17 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.6E-166 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 Gene3D G3DSA:3.40.50.970 327 538 5.7E-85 T 11-10-2018 AMS64_17875 d2305d5ad595990ead9d3105de1d8071 663 SUPERFAMILY SSF52518 5 329 1.11E-121 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_00745 8e16f34f74777145b8eb191733dc40b6 246 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 99 230 1.2E-12 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_00745 8e16f34f74777145b8eb191733dc40b6 246 SUPERFAMILY SSF53850 17 232 1.19E-32 T 11-10-2018 AMS64_00745 8e16f34f74777145b8eb191733dc40b6 246 Gene3D G3DSA:3.40.190.10 194 227 1.1E-14 T 11-10-2018 AMS64_00745 8e16f34f74777145b8eb191733dc40b6 246 Gene3D G3DSA:3.40.190.10 9 85 2.1E-5 T 11-10-2018 AMS64_00745 8e16f34f74777145b8eb191733dc40b6 246 Gene3D G3DSA:3.40.190.10 100 193 1.1E-14 T 11-10-2018 AMS64_00745 8e16f34f74777145b8eb191733dc40b6 246 SMART SM00062 16 231 1.8E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_19360 862ec09b3a050414f6f0f457347b186d 329 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 7 324 5.8E-129 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 AMS64_19360 862ec09b3a050414f6f0f457347b186d 329 Gene3D G3DSA:3.20.20.30 2 328 1.2E-94 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMS64_19360 862ec09b3a050414f6f0f457347b186d 329 SUPERFAMILY SSF51679 5 324 4.0E-79 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMS64_19360 862ec09b3a050414f6f0f457347b186d 329 Pfam PF00296 Luciferase-like monooxygenase 20 301 1.5E-33 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMS64_18250 ecf325c7b56f9794091a3870dfaea81c 262 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 262 35.251 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AMS64_18250 ecf325c7b56f9794091a3870dfaea81c 262 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 253 3.7E-86 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AMS64_18250 ecf325c7b56f9794091a3870dfaea81c 262 SMART SM00900 147 245 1.0E-29 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMS64_18250 ecf325c7b56f9794091a3870dfaea81c 262 PIRSF PIRSF009437 1 260 1.4E-95 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AMS64_18250 ecf325c7b56f9794091a3870dfaea81c 262 Pfam PF04205 FMN-binding domain 147 241 4.5E-15 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMS64_22175 936f47c36abc9f7b5d9ef9636cbdd686 494 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 492 3.5E-200 T 11-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AMS64_22175 936f47c36abc9f7b5d9ef9636cbdd686 494 PIRSF PIRSF000204 1 494 3.9E-231 T 11-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AMS64_22175 936f47c36abc9f7b5d9ef9636cbdd686 494 SUPERFAMILY SSF52467 321 494 7.09E-78 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMS64_22175 936f47c36abc9f7b5d9ef9636cbdd686 494 Gene3D G3DSA:3.40.50.1220 318 494 8.7E-87 T 11-10-2018 AMS64_20960 4dc89f849d83e4b63f242373f6dbf799 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.6E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_20960 4dc89f849d83e4b63f242373f6dbf799 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.6E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_20960 4dc89f849d83e4b63f242373f6dbf799 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.6E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_20960 4dc89f849d83e4b63f242373f6dbf799 215 Gene3D G3DSA:1.10.10.10 148 208 2.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_20960 4dc89f849d83e4b63f242373f6dbf799 215 Gene3D G3DSA:3.40.50.2300 5 142 3.0E-29 T 11-10-2018 AMS64_20960 4dc89f849d83e4b63f242373f6dbf799 215 SMART SM00421 148 205 1.7E-24 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_20960 4dc89f849d83e4b63f242373f6dbf799 215 SUPERFAMILY SSF46894 133 207 2.07E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_20960 4dc89f849d83e4b63f242373f6dbf799 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 2.2E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_20960 4dc89f849d83e4b63f242373f6dbf799 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_02130 ce1baa8eb99e4bcc8ce6c488d93b37dd 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 233 3.8E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_02130 ce1baa8eb99e4bcc8ce6c488d93b37dd 240 Pfam PF00072 Response regulator receiver domain 8 117 2.7E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_02130 ce1baa8eb99e4bcc8ce6c488d93b37dd 240 SUPERFAMILY SSF52172 4 130 7.68E-44 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_02130 ce1baa8eb99e4bcc8ce6c488d93b37dd 240 SMART SM00448 6 116 3.8E-47 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_02130 ce1baa8eb99e4bcc8ce6c488d93b37dd 240 SUPERFAMILY SSF46894 138 234 1.28E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_02130 ce1baa8eb99e4bcc8ce6c488d93b37dd 240 Gene3D G3DSA:1.10.10.10 133 239 8.6E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_02130 ce1baa8eb99e4bcc8ce6c488d93b37dd 240 SMART SM00862 157 233 1.0E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_02130 ce1baa8eb99e4bcc8ce6c488d93b37dd 240 Gene3D G3DSA:3.40.50.2300 4 132 7.0E-41 T 11-10-2018 AMS64_13800 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 PRINTS PR01592 Low calcium response V antigen signature 106 124 1.5E-13 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AMS64_13800 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 PRINTS PR01592 Low calcium response V antigen signature 151 173 1.5E-13 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AMS64_13800 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 PRINTS PR01592 Low calcium response V antigen signature 32 57 1.5E-13 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AMS64_13800 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 PRINTS PR01592 Low calcium response V antigen signature 128 148 1.5E-13 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AMS64_13800 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 SUPERFAMILY SSF103388 31 360 3.53E-106 T 11-10-2018 IPR036139 Virulence-associated V antigen superfamily GO:0005576|GO:0009405 AMS64_13800 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 Pfam PF04792 V antigen (LcrV) protein 4 237 1.3E-37 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AMS64_13800 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 Pfam PF04792 V antigen (LcrV) protein 269 361 1.1E-43 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AMS64_07755 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 PRINTS PR01592 Low calcium response V antigen signature 106 124 1.5E-13 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AMS64_07755 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 PRINTS PR01592 Low calcium response V antigen signature 151 173 1.5E-13 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AMS64_07755 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 PRINTS PR01592 Low calcium response V antigen signature 32 57 1.5E-13 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AMS64_07755 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 PRINTS PR01592 Low calcium response V antigen signature 128 148 1.5E-13 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AMS64_07755 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 SUPERFAMILY SSF103388 31 360 3.53E-106 T 11-10-2018 IPR036139 Virulence-associated V antigen superfamily GO:0005576|GO:0009405 AMS64_07755 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 Pfam PF04792 V antigen (LcrV) protein 4 237 1.3E-37 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AMS64_07755 20a1f1b286ab7e7fc9a9eb04ea5ba34a 361 Pfam PF04792 V antigen (LcrV) protein 269 361 1.1E-43 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AMS64_15320 dc6405d7555cac052788026ce24b2af2 463 SMART SM00098 34 463 3.2E-99 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15320 dc6405d7555cac052788026ce24b2af2 463 PRINTS PR00113 Alkaline phosphatase signature 197 207 6.4E-41 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15320 dc6405d7555cac052788026ce24b2af2 463 PRINTS PR00113 Alkaline phosphatase signature 33 53 6.4E-41 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15320 dc6405d7555cac052788026ce24b2af2 463 PRINTS PR00113 Alkaline phosphatase signature 279 308 6.4E-41 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15320 dc6405d7555cac052788026ce24b2af2 463 PRINTS PR00113 Alkaline phosphatase signature 143 163 6.4E-41 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15320 dc6405d7555cac052788026ce24b2af2 463 Pfam PF00245 Alkaline phosphatase 33 462 1.5E-108 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15320 dc6405d7555cac052788026ce24b2af2 463 SUPERFAMILY SSF53649 12 463 4.4E-132 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMS64_15320 dc6405d7555cac052788026ce24b2af2 463 Gene3D G3DSA:3.40.720.10 14 463 2.6E-144 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMS64_00735 21fd5f2b7a490b56fa722e6123847dee 680 Pfam PF01432 Peptidase family M3 222 677 1.1E-161 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AMS64_00735 21fd5f2b7a490b56fa722e6123847dee 680 SUPERFAMILY SSF55486 1 677 9.52E-213 T 11-10-2018 AMS64_00735 21fd5f2b7a490b56fa722e6123847dee 680 Gene3D G3DSA:1.10.1370.10 140 610 5.3E-267 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMS64_00735 21fd5f2b7a490b56fa722e6123847dee 680 Gene3D G3DSA:1.10.1370.40 13 675 5.3E-267 T 11-10-2018 AMS64_13805 279a17108797a8a7e95fb8391dca5b60 94 Pfam PF07216 LcrG protein 8 94 1.9E-26 T 11-10-2018 IPR009863 Type III secretion protein, LcrG AMS64_13805 279a17108797a8a7e95fb8391dca5b60 94 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 9 94 4.0E-41 T 11-10-2018 IPR009863 Type III secretion protein, LcrG AMS64_13805 279a17108797a8a7e95fb8391dca5b60 94 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 9 94 4.3E-27 T 11-10-2018 IPR009863 Type III secretion protein, LcrG AMS64_07750 279a17108797a8a7e95fb8391dca5b60 94 Pfam PF07216 LcrG protein 8 94 1.9E-26 T 11-10-2018 IPR009863 Type III secretion protein, LcrG AMS64_07750 279a17108797a8a7e95fb8391dca5b60 94 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 9 94 4.0E-41 T 11-10-2018 IPR009863 Type III secretion protein, LcrG AMS64_07750 279a17108797a8a7e95fb8391dca5b60 94 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 9 94 4.3E-27 T 11-10-2018 IPR009863 Type III secretion protein, LcrG AMS64_16675 19a862e4540a52b07b5735d3f7146111 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 32 4.5E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_16675 19a862e4540a52b07b5735d3f7146111 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 12 141 1.7E-52 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AMS64_16675 19a862e4540a52b07b5735d3f7146111 144 SUPERFAMILY SSF54523 39 141 2.2E-31 T 11-10-2018 AMS64_16675 19a862e4540a52b07b5735d3f7146111 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_16675 19a862e4540a52b07b5735d3f7146111 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 3.3E-15 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AMS64_16675 19a862e4540a52b07b5735d3f7146111 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 3.3E-15 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AMS64_16675 19a862e4540a52b07b5735d3f7146111 144 Pfam PF08334 Type II secretion system (T2SS), protein G 35 140 3.5E-40 T 11-10-2018 IPR013545 Type II secretion system protein G AMS64_16675 19a862e4540a52b07b5735d3f7146111 144 Gene3D G3DSA:3.30.700.10 36 141 3.5E-34 T 11-10-2018 AMS64_16675 19a862e4540a52b07b5735d3f7146111 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 6.2E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_21615 ba5cdb333192bd1327cc960fb1f1fe7f 427 Gene3D G3DSA:1.10.3860.10 9 421 4.9E-132 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_21615 ba5cdb333192bd1327cc960fb1f1fe7f 427 SUPERFAMILY SSF118215 19 404 6.02E-112 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_21615 ba5cdb333192bd1327cc960fb1f1fe7f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 7.1E-39 T 11-10-2018 AMS64_21615 ba5cdb333192bd1327cc960fb1f1fe7f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 7.1E-39 T 11-10-2018 AMS64_21615 ba5cdb333192bd1327cc960fb1f1fe7f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 7.1E-39 T 11-10-2018 AMS64_21615 ba5cdb333192bd1327cc960fb1f1fe7f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 7.1E-39 T 11-10-2018 AMS64_21615 ba5cdb333192bd1327cc960fb1f1fe7f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 7.1E-39 T 11-10-2018 AMS64_21615 ba5cdb333192bd1327cc960fb1f1fe7f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 84 109 7.1E-39 T 11-10-2018 AMS64_21615 ba5cdb333192bd1327cc960fb1f1fe7f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 229 248 7.1E-39 T 11-10-2018 AMS64_21615 ba5cdb333192bd1327cc960fb1f1fe7f 427 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 299 322 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AMS64_21615 ba5cdb333192bd1327cc960fb1f1fe7f 427 Pfam PF00375 Sodium:dicarboxylate symporter family 19 403 2.4E-126 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMS64_10470 62b2fb073034c8ce5363c79f63d543b7 333 Pfam PF00534 Glycosyl transferases group 1 169 312 1.1E-21 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMS64_10470 62b2fb073034c8ce5363c79f63d543b7 333 Pfam PF13439 Glycosyltransferase Family 4 16 156 2.1E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMS64_10470 62b2fb073034c8ce5363c79f63d543b7 333 SUPERFAMILY SSF53756 13 331 6.28E-57 T 11-10-2018 AMS64_10470 62b2fb073034c8ce5363c79f63d543b7 333 Gene3D G3DSA:3.40.50.2000 10 167 2.2E-17 T 11-10-2018 AMS64_10470 62b2fb073034c8ce5363c79f63d543b7 333 Gene3D G3DSA:3.40.50.2000 168 318 2.6E-30 T 11-10-2018 AMS64_00960 976b09c359f1a5ab7a805d3bb2426450 174 SUPERFAMILY SSF52218 3 166 4.19E-30 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_00960 976b09c359f1a5ab7a805d3bb2426450 174 Gene3D G3DSA:3.40.50.360 4 111 1.1E-9 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_00960 976b09c359f1a5ab7a805d3bb2426450 174 Pfam PF12724 Flavodoxin domain 5 151 2.3E-45 T 11-10-2018 IPR026816 Flavodoxin domain AMS64_19055 f7c593c9a698035e15c26c5d1e8f53a2 614 PIRSF PIRSF001217 8 614 3.6E-205 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMS64_19055 f7c593c9a698035e15c26c5d1e8f53a2 614 Gene3D G3DSA:3.90.226.10 313 539 1.9E-160 T 11-10-2018 AMS64_19055 f7c593c9a698035e15c26c5d1e8f53a2 614 Pfam PF01343 Peptidase family S49 136 288 1.4E-32 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMS64_19055 f7c593c9a698035e15c26c5d1e8f53a2 614 Pfam PF01343 Peptidase family S49 390 541 3.5E-46 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMS64_19055 f7c593c9a698035e15c26c5d1e8f53a2 614 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 15 607 8.6E-188 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMS64_19055 f7c593c9a698035e15c26c5d1e8f53a2 614 Gene3D G3DSA:3.90.226.10 92 312 1.9E-160 T 11-10-2018 AMS64_19055 f7c593c9a698035e15c26c5d1e8f53a2 614 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 348 538 1.4E-52 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AMS64_19055 f7c593c9a698035e15c26c5d1e8f53a2 614 Gene3D G3DSA:3.40.1750.10 184 496 1.9E-160 T 11-10-2018 AMS64_19055 f7c593c9a698035e15c26c5d1e8f53a2 614 SUPERFAMILY SSF52096 30 284 9.95E-24 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_19055 f7c593c9a698035e15c26c5d1e8f53a2 614 SUPERFAMILY SSF52096 315 527 2.68E-42 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_03880 30d12dfaf885e3c8ef4ae89f75170410 265 Gene3D G3DSA:3.40.50.1820 11 256 1.0E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_03880 30d12dfaf885e3c8ef4ae89f75170410 265 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 18 256 1.4E-78 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AMS64_03880 30d12dfaf885e3c8ef4ae89f75170410 265 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 16 257 31.894 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AMS64_03880 30d12dfaf885e3c8ef4ae89f75170410 265 SUPERFAMILY SSF53474 4 258 5.86E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_03880 30d12dfaf885e3c8ef4ae89f75170410 265 Pfam PF12697 Alpha/beta hydrolase family 20 250 6.6E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_15425 a20a77f0e4e63f8c157358287bb8b803 181 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 104 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMS64_15425 a20a77f0e4e63f8c157358287bb8b803 181 SUPERFAMILY SSF53927 14 167 5.02E-58 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMS64_15425 a20a77f0e4e63f8c157358287bb8b803 181 Pfam PF14437 MafB19-like deaminase 17 163 2.6E-32 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AMS64_15425 a20a77f0e4e63f8c157358287bb8b803 181 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 22 163 45.849 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AMS64_15425 a20a77f0e4e63f8c157358287bb8b803 181 Gene3D G3DSA:3.40.140.10 11 177 8.8E-64 T 11-10-2018 AMS64_22315 6e4a216d30695fa8c5f91c96120585cc 186 SUPERFAMILY SSF55821 3 183 1.04E-53 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMS64_22315 6e4a216d30695fa8c5f91c96120585cc 186 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 2 184 40.806 T 11-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AMS64_22315 6e4a216d30695fa8c5f91c96120585cc 186 Gene3D G3DSA:3.90.870.10 2 184 5.2E-59 T 11-10-2018 AMS64_22315 6e4a216d30695fa8c5f91c96120585cc 186 Pfam PF01300 Telomere recombination 11 184 1.3E-43 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AMS64_16930 8df4fed38c9b4ac25ba84b4ac4a26455 146 Pfam PF03960 ArsC family 12 119 4.8E-19 T 11-10-2018 IPR006660 Arsenate reductase-like AMS64_16930 8df4fed38c9b4ac25ba84b4ac4a26455 146 Gene3D G3DSA:3.40.30.10 6 146 6.7E-61 T 11-10-2018 AMS64_16930 8df4fed38c9b4ac25ba84b4ac4a26455 146 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 9 121 1.2E-39 T 11-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AMS64_16930 8df4fed38c9b4ac25ba84b4ac4a26455 146 SUPERFAMILY SSF52833 9 142 6.72E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_20420 0dfb6d61837474294289056edb5f9be7 398 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 395 1.5E-70 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AMS64_20420 0dfb6d61837474294289056edb5f9be7 398 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 5.2E-135 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AMS64_20420 0dfb6d61837474294289056edb5f9be7 398 Pfam PF07670 Nucleoside recognition 89 184 4.8E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AMS64_20420 0dfb6d61837474294289056edb5f9be7 398 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 1.2E-22 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AMS64_14790 2d014c4d164dc1f37e6d94e9c81816c4 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 5.4E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_14790 2d014c4d164dc1f37e6d94e9c81816c4 296 SUPERFAMILY SSF161098 10 296 4.71E-67 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_14790 2d014c4d164dc1f37e6d94e9c81816c4 296 Gene3D G3DSA:1.10.3720.10 1 283 2.5E-72 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_01540 fa4489e4221fbb1180b507a7ae68fd2f 177 Pfam PF00227 Proteasome subunit 2 171 9.2E-24 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 AMS64_01540 fa4489e4221fbb1180b507a7ae68fd2f 177 SUPERFAMILY SSF56235 2 172 6.51E-58 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_01540 fa4489e4221fbb1180b507a7ae68fd2f 177 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 40.548 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMS64_01540 fa4489e4221fbb1180b507a7ae68fd2f 177 PIRSF PIRSF039093 1 174 3.1E-86 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMS64_01540 fa4489e4221fbb1180b507a7ae68fd2f 177 Gene3D G3DSA:3.60.20.10 1 173 3.9E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_01540 fa4489e4221fbb1180b507a7ae68fd2f 177 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 171 2.2E-84 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMS64_11265 e967e3b09b1ccb69c3c7bf420b9da02a 475 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 7 470 1.8E-152 T 11-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 AMS64_11265 e967e3b09b1ccb69c3c7bf420b9da02a 475 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 226 467 3.8E-76 T 11-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 AMS64_11265 e967e3b09b1ccb69c3c7bf420b9da02a 475 Pfam PF06812 ImpA, N-terminal, type VI secretion system 13 111 2.1E-14 T 11-10-2018 IPR010657 ImpA, N-terminal AMS64_18640 5b418d35e46c398d87a1bdc78304ab23 133 Gene3D G3DSA:3.10.180.10 9 126 4.9E-6 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_18640 5b418d35e46c398d87a1bdc78304ab23 133 SUPERFAMILY SSF54593 11 127 4.77E-10 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_05905 107e97889950596e7cad55b60087da1e 182 Pfam PF11188 Protein of unknown function (DUF2975) 67 182 6.6E-16 T 11-10-2018 IPR021354 Protein of unknown function DUF2975 AMS64_08800 8d458bd263b741dd9847ab640958868b 292 PIRSF PIRSF012524 6 282 4.2E-76 T 11-10-2018 IPR014464 Conserved virulence factor B AMS64_08800 8d458bd263b741dd9847ab640958868b 292 Pfam PF13509 S1 domain 10 69 5.0E-21 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain AMS64_08800 8d458bd263b741dd9847ab640958868b 292 Gene3D G3DSA:1.10.10.10 219 281 6.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_10800 66656355d4b28fd3ff0ad4eb624a4cf5 174 Pfam PF05488 PAAR motif 20 87 1.1E-16 T 11-10-2018 IPR008727 PAAR motif AMS64_10800 66656355d4b28fd3ff0ad4eb624a4cf5 174 Gene3D G3DSA:2.60.200.60 3 95 2.8E-39 T 11-10-2018 AMS64_20360 e9c5f87faf5606c4cef33f399334c843 112 PRINTS PR00340 P-II protein signature 52 75 6.6E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20360 e9c5f87faf5606c4cef33f399334c843 112 PRINTS PR00340 P-II protein signature 23 41 6.6E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20360 e9c5f87faf5606c4cef33f399334c843 112 PRINTS PR00340 P-II protein signature 83 103 6.6E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20360 e9c5f87faf5606c4cef33f399334c843 112 PRINTS PR00340 P-II protein signature 2 17 6.6E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20360 e9c5f87faf5606c4cef33f399334c843 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMS64_20360 e9c5f87faf5606c4cef33f399334c843 112 SUPERFAMILY SSF54913 1 112 3.11E-44 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMS64_20360 e9c5f87faf5606c4cef33f399334c843 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.4E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20360 e9c5f87faf5606c4cef33f399334c843 112 PIRSF PIRSF039144 1 112 9.6E-54 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_20360 e9c5f87faf5606c4cef33f399334c843 112 Gene3D G3DSA:3.30.70.120 1 112 6.2E-45 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMS64_20360 e9c5f87faf5606c4cef33f399334c843 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AMS64_20360 e9c5f87faf5606c4cef33f399334c843 112 SMART SM00938 4 105 3.5E-66 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 SUPERFAMILY SSF55681 163 508 1.93E-117 T 11-10-2018 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 PIRSF PIRSF039101 2 511 2.5E-205 T 11-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 Pfam PF01336 OB-fold nucleic acid binding domain 69 147 2.0E-18 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 511 1.1E-223 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 Pfam PF00152 tRNA synthetases class II (D, K and N) 164 507 2.7E-79 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 Gene3D G3DSA:3.30.930.10 156 505 2.1E-129 T 11-10-2018 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 Gene3D G3DSA:2.40.50.140 16 155 5.2E-44 T 11-10-2018 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 SUPERFAMILY SSF50249 14 156 2.23E-47 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 22 511 45.023 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 216 232 3.8E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 392 408 3.8E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 200 210 3.8E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 245 258 3.8E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMS64_06090 870052f15c42581a16ec7dec1ce676e6 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 263 280 3.8E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMS64_18145 dd1d6cbb884fe0751d08ee6870d755bb 270 SUPERFAMILY SSF47807 174 266 2.24E-22 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AMS64_18145 dd1d6cbb884fe0751d08ee6870d755bb 270 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 175 266 3.9E-25 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AMS64_18145 dd1d6cbb884fe0751d08ee6870d755bb 270 Gene3D G3DSA:1.10.150.20 177 266 1.9E-22 T 11-10-2018 AMS64_18145 dd1d6cbb884fe0751d08ee6870d755bb 270 Gene3D G3DSA:3.40.50.1010 4 176 5.8E-50 T 11-10-2018 AMS64_18145 dd1d6cbb884fe0751d08ee6870d755bb 270 SUPERFAMILY SSF88723 6 165 3.68E-36 T 11-10-2018 IPR029060 PIN-like domain superfamily AMS64_18145 dd1d6cbb884fe0751d08ee6870d755bb 270 SMART SM00279 177 212 3.8E-12 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AMS64_18145 dd1d6cbb884fe0751d08ee6870d755bb 270 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 174 3.8E-31 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AMS64_18145 dd1d6cbb884fe0751d08ee6870d755bb 270 Hamap MF_01192 Flap endonuclease Xni [xni]. 5 267 44.953 T 11-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 AMS64_18145 dd1d6cbb884fe0751d08ee6870d755bb 270 SMART SM00475 4 266 6.7E-67 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AMS64_19445 478a34a383e5d30c5f0bcd21962481df 503 Pfam PF01256 Carbohydrate kinase 263 491 6.9E-56 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMS64_19445 478a34a383e5d30c5f0bcd21962481df 503 PIRSF PIRSF017184 20 502 1.0E-124 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AMS64_19445 478a34a383e5d30c5f0bcd21962481df 503 SUPERFAMILY SSF53613 238 496 1.05E-71 T 11-10-2018 IPR029056 Ribokinase-like AMS64_19445 478a34a383e5d30c5f0bcd21962481df 503 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 240 501 22.021 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMS64_19445 478a34a383e5d30c5f0bcd21962481df 503 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 243 497 2.5E-63 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMS64_19445 478a34a383e5d30c5f0bcd21962481df 503 Gene3D G3DSA:3.40.50.10260 19 231 9.7E-54 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AMS64_19445 478a34a383e5d30c5f0bcd21962481df 503 SUPERFAMILY SSF64153 22 261 1.7E-58 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AMS64_19445 478a34a383e5d30c5f0bcd21962481df 503 Pfam PF03853 YjeF-related protein N-terminus 44 206 4.2E-41 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMS64_19445 478a34a383e5d30c5f0bcd21962481df 503 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 23 227 21.607 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMS64_19445 478a34a383e5d30c5f0bcd21962481df 503 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 22 227 7.0E-42 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMS64_19445 478a34a383e5d30c5f0bcd21962481df 503 Gene3D G3DSA:3.40.1190.20 237 497 4.2E-83 T 11-10-2018 IPR029056 Ribokinase-like AMS64_15535 efc4419f13e126c07f961567e9e87992 153 Hamap MF_04109 Endolysin. 1 153 37.862 T 11-10-2018 IPR034691 Endolysin lambda type GO:0003796|GO:0009253|GO:0019076|GO:0044659 AMS64_15535 efc4419f13e126c07f961567e9e87992 153 Gene3D G3DSA:1.10.530.10 4 153 2.1E-55 T 11-10-2018 AMS64_15535 efc4419f13e126c07f961567e9e87992 153 Pfam PF00959 Phage lysozyme 41 139 9.2E-12 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AMS64_15535 efc4419f13e126c07f961567e9e87992 153 SUPERFAMILY SSF53955 7 150 1.18E-43 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_22105 efc4419f13e126c07f961567e9e87992 153 Hamap MF_04109 Endolysin. 1 153 37.862 T 11-10-2018 IPR034691 Endolysin lambda type GO:0003796|GO:0009253|GO:0019076|GO:0044659 AMS64_22105 efc4419f13e126c07f961567e9e87992 153 Gene3D G3DSA:1.10.530.10 4 153 2.1E-55 T 11-10-2018 AMS64_22105 efc4419f13e126c07f961567e9e87992 153 Pfam PF00959 Phage lysozyme 41 139 9.2E-12 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AMS64_22105 efc4419f13e126c07f961567e9e87992 153 SUPERFAMILY SSF53955 7 150 1.18E-43 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_21580 2b56413d2d60c3f86bc533471d91c19c 417 SMART SM00155 113 140 0.0014 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMS64_21580 2b56413d2d60c3f86bc533471d91c19c 417 SMART SM00155 331 358 2.5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMS64_21580 2b56413d2d60c3f86bc533471d91c19c 417 Gene3D G3DSA:3.30.870.10 246 410 3.2E-22 T 11-10-2018 AMS64_21580 2b56413d2d60c3f86bc533471d91c19c 417 SUPERFAMILY SSF56024 8 191 3.59E-37 T 11-10-2018 AMS64_21580 2b56413d2d60c3f86bc533471d91c19c 417 SUPERFAMILY SSF56024 222 395 4.26E-22 T 11-10-2018 AMS64_21580 2b56413d2d60c3f86bc533471d91c19c 417 Gene3D G3DSA:3.30.870.10 17 187 1.3E-32 T 11-10-2018 AMS64_21580 2b56413d2d60c3f86bc533471d91c19c 417 Pfam PF13091 PLD-like domain 21 172 1.6E-13 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AMS64_21580 2b56413d2d60c3f86bc533471d91c19c 417 Pfam PF13091 PLD-like domain 265 383 3.4E-15 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AMS64_07110 5b774fd70d387fa1e7471283d8f7bfb7 214 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 12 197 29.663 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AMS64_07110 5b774fd70d387fa1e7471283d8f7bfb7 214 SUPERFAMILY SSF53448 14 194 4.32E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_07110 5b774fd70d387fa1e7471283d8f7bfb7 214 Gene3D G3DSA:3.90.550.10 12 200 2.2E-56 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_07110 5b774fd70d387fa1e7471283d8f7bfb7 214 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 15 195 3.7E-72 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AMS64_07110 5b774fd70d387fa1e7471283d8f7bfb7 214 Pfam PF12804 MobA-like NTP transferase domain 16 164 1.8E-35 T 11-10-2018 IPR025877 MobA-like NTP transferase AMS64_05030 4e87e5825dd3e4f85fb43e3858445f08 636 SUPERFAMILY SSF52540 295 511 1.46E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_05030 4e87e5825dd3e4f85fb43e3858445f08 636 Pfam PF16326 ABC transporter C-terminal domain 560 625 8.9E-10 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AMS64_05030 4e87e5825dd3e4f85fb43e3858445f08 636 Pfam PF00005 ABC transporter 328 459 4.1E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_05030 4e87e5825dd3e4f85fb43e3858445f08 636 Gene3D G3DSA:3.40.50.300 275 533 3.7E-55 T 11-10-2018 AMS64_05030 4e87e5825dd3e4f85fb43e3858445f08 636 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_05030 4e87e5825dd3e4f85fb43e3858445f08 636 Pfam PF00005 ABC transporter 17 178 4.6E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_05030 4e87e5825dd3e4f85fb43e3858445f08 636 Gene3D G3DSA:3.40.50.300 6 273 1.3E-61 T 11-10-2018 AMS64_05030 4e87e5825dd3e4f85fb43e3858445f08 636 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_05030 4e87e5825dd3e4f85fb43e3858445f08 636 SMART SM00382 26 223 7.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_05030 4e87e5825dd3e4f85fb43e3858445f08 636 SMART SM00382 337 506 2.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_05030 4e87e5825dd3e4f85fb43e3858445f08 636 SUPERFAMILY SSF52540 4 258 7.79E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_05030 4e87e5825dd3e4f85fb43e3858445f08 636 Pfam PF12848 ABC transporter 217 299 1.9E-27 T 11-10-2018 IPR032781 ABC-transporter extension domain AMS64_17430 d7ed1960d3ec7961824e1ccfe1ad86c3 285 Pfam PF12833 Helix-turn-helix domain 194 272 4.0E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_17430 d7ed1960d3ec7961824e1ccfe1ad86c3 285 SUPERFAMILY SSF46689 173 219 8.96E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_17430 d7ed1960d3ec7961824e1ccfe1ad86c3 285 Gene3D G3DSA:1.10.10.60 173 276 1.6E-26 T 11-10-2018 AMS64_17430 d7ed1960d3ec7961824e1ccfe1ad86c3 285 SUPERFAMILY SSF51215 27 158 3.14E-5 T 11-10-2018 IPR037923 Transcription regulator HTH-like AMS64_17430 d7ed1960d3ec7961824e1ccfe1ad86c3 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 267 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_17430 d7ed1960d3ec7961824e1ccfe1ad86c3 285 SMART SM00342 188 271 1.6E-30 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_17430 d7ed1960d3ec7961824e1ccfe1ad86c3 285 SUPERFAMILY SSF46689 224 272 4.48E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_18515 000d91fb7b86196a8bb057077397cfe9 437 TIGRFAM TIGR03236 dnd_assoc_1: DNA phosphorothioation-dependent restriction protein DptG 83 437 1.9E-86 T 11-10-2018 IPR017645 DNA phosphorothioation-dependent restriction protein DptG AMS64_17735 b241a7abc16938a9b8ccdda48557ed87 452 SMART SM00977 365 437 6.8E-24 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMS64_17735 b241a7abc16938a9b8ccdda48557ed87 452 SUPERFAMILY SSF52402 20 233 6.84E-58 T 11-10-2018 AMS64_17735 b241a7abc16938a9b8ccdda48557ed87 452 Gene3D G3DSA:1.20.59.20 232 317 5.1E-28 T 11-10-2018 AMS64_17735 b241a7abc16938a9b8ccdda48557ed87 452 Pfam PF09179 TilS substrate binding domain 247 314 1.6E-22 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMS64_17735 b241a7abc16938a9b8ccdda48557ed87 452 Gene3D G3DSA:3.40.50.620 17 231 1.1E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_17735 b241a7abc16938a9b8ccdda48557ed87 452 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 366 412 1.6E-12 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMS64_17735 b241a7abc16938a9b8ccdda48557ed87 452 SUPERFAMILY SSF82829 233 318 2.75E-27 T 11-10-2018 AMS64_17735 b241a7abc16938a9b8ccdda48557ed87 452 SUPERFAMILY SSF56037 324 436 7.32E-29 T 11-10-2018 AMS64_17735 b241a7abc16938a9b8ccdda48557ed87 452 Pfam PF01171 PP-loop family 22 199 3.0E-55 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AMS64_17735 b241a7abc16938a9b8ccdda48557ed87 452 Pfam PF11734 TilS substrate C-terminal domain 365 431 3.5E-23 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMS64_17735 b241a7abc16938a9b8ccdda48557ed87 452 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 22 203 5.8E-50 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMS64_17735 b241a7abc16938a9b8ccdda48557ed87 452 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 6 306 22.905 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMS64_19355 19e48ae049f26a76994e212df66b9168 141 SUPERFAMILY SSF54593 9 134 1.34E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_19355 19e48ae049f26a76994e212df66b9168 141 Gene3D G3DSA:3.10.180.10 5 141 4.5E-52 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_19355 19e48ae049f26a76994e212df66b9168 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 131 2.7E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 468 2.8E-179 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 213 376 2.4E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 157 1.1E-20 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 388 467 3.8E-26 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 Gene3D G3DSA:3.40.50.300 1 159 7.3E-42 T 11-10-2018 AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 Gene3D G3DSA:3.30.300.20 388 470 3.0E-20 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.4E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.4E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 SUPERFAMILY SSF52540 137 474 4.45E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 Pfam PF01926 50S ribosome-binding GTPase 215 332 4.1E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.0E-28 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 SUPERFAMILY SSF52540 4 164 4.03E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 Gene3D G3DSA:3.40.50.300 210 385 1.0E-50 T 11-10-2018 AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 Hamap MF_00195 GTPase Der [der]. 2 471 38.754 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AMS64_11575 3e43054ba415517225932a8cbdedf5a1 498 PIRSF PIRSF006485 1 476 1.7E-179 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AMS64_18005 a2f020b3c952f208d83ed1ad075ff89d 450 Gene3D G3DSA:2.30.42.10 126 219 1.4E-26 T 11-10-2018 AMS64_18005 a2f020b3c952f208d83ed1ad075ff89d 450 Gene3D G3DSA:2.30.42.10 221 309 8.2E-21 T 11-10-2018 AMS64_18005 a2f020b3c952f208d83ed1ad075ff89d 450 SUPERFAMILY SSF50156 89 188 1.97E-12 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMS64_18005 a2f020b3c952f208d83ed1ad075ff89d 450 Pfam PF02163 Peptidase family M50 10 438 3.3E-86 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 AMS64_18005 a2f020b3c952f208d83ed1ad075ff89d 450 Pfam PF13180 PDZ domain 224 287 1.4E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMS64_18005 a2f020b3c952f208d83ed1ad075ff89d 450 SUPERFAMILY SSF50156 198 290 1.71E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMS64_18005 a2f020b3c952f208d83ed1ad075ff89d 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 450 4.0E-140 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AMS64_18005 a2f020b3c952f208d83ed1ad075ff89d 450 SMART SM00228 211 280 2.0E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMS64_18005 a2f020b3c952f208d83ed1ad075ff89d 450 SMART SM00228 116 186 0.1 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMS64_10105 58728e0920db45fd89d822b0291e80ae 325 SUPERFAMILY SSF52540 8 297 4.74E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10105 58728e0920db45fd89d822b0291e80ae 325 Gene3D G3DSA:3.40.50.300 1 206 2.9E-51 T 11-10-2018 AMS64_10105 58728e0920db45fd89d822b0291e80ae 325 Gene3D G3DSA:1.10.8.300 207 322 2.0E-33 T 11-10-2018 AMS64_10105 58728e0920db45fd89d822b0291e80ae 325 PIRSF PIRSF002849 1 325 2.0E-123 T 11-10-2018 AMS64_10105 58728e0920db45fd89d822b0291e80ae 325 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 169 2.7E-61 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMS64_22230 a290d57780bc8d40194214cb9a8ad0da 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 5.0E-32 T 11-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AMS64_22230 a290d57780bc8d40194214cb9a8ad0da 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 3.5E-56 T 11-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AMS64_22230 a290d57780bc8d40194214cb9a8ad0da 154 Gene3D G3DSA:2.30.30.20 101 153 2.5E-22 T 11-10-2018 AMS64_22230 a290d57780bc8d40194214cb9a8ad0da 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 150 2.9E-18 T 11-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AMS64_22230 a290d57780bc8d40194214cb9a8ad0da 154 Gene3D G3DSA:3.30.70.140 1 100 3.8E-37 T 11-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily AMS64_22230 a290d57780bc8d40194214cb9a8ad0da 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 4.6E-32 T 11-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AMS64_22230 a290d57780bc8d40194214cb9a8ad0da 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.555 T 11-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AMS64_22230 a290d57780bc8d40194214cb9a8ad0da 154 SUPERFAMILY SSF54893 2 100 2.35E-35 T 11-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily AMS64_22230 a290d57780bc8d40194214cb9a8ad0da 154 SUPERFAMILY SSF57825 101 151 1.96E-14 T 11-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily AMS64_10625 c9b8eb368f8c66cd1311adb091e760bc 109 Gene3D G3DSA:1.10.260.40 5 102 5.1E-24 T 11-10-2018 AMS64_10625 c9b8eb368f8c66cd1311adb091e760bc 109 SUPERFAMILY SSF47413 4 72 3.94E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_10625 c9b8eb368f8c66cd1311adb091e760bc 109 SMART SM00530 8 67 2.3E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_10625 c9b8eb368f8c66cd1311adb091e760bc 109 Pfam PF12844 Helix-turn-helix domain 8 67 1.0E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_12565 4915d8d16580b02f2db4ff0c285614c4 158 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 6.1E-38 T 11-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMS64_12565 4915d8d16580b02f2db4ff0c285614c4 158 Gene3D G3DSA:3.40.960.10 21 153 1.7E-45 T 11-10-2018 AMS64_12565 4915d8d16580b02f2db4ff0c285614c4 158 Pfam PF03852 DNA mismatch endonuclease Vsr 3 74 6.0E-27 T 11-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMS64_12565 4915d8d16580b02f2db4ff0c285614c4 158 SUPERFAMILY SSF52980 3 147 1.18E-48 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMS64_08955 eeac0e5f8064fc4d1c9723a6623fe0f6 310 TIGRFAM TIGR00746 arcC: carbamate kinase 4 309 2.9E-109 T 11-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMS64_08955 eeac0e5f8064fc4d1c9723a6623fe0f6 310 PRINTS PR01469 Bacterial carbamate kinase signature 156 175 2.6E-63 T 11-10-2018 AMS64_08955 eeac0e5f8064fc4d1c9723a6623fe0f6 310 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 2.6E-63 T 11-10-2018 AMS64_08955 eeac0e5f8064fc4d1c9723a6623fe0f6 310 PRINTS PR01469 Bacterial carbamate kinase signature 179 197 2.6E-63 T 11-10-2018 AMS64_08955 eeac0e5f8064fc4d1c9723a6623fe0f6 310 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 2.6E-63 T 11-10-2018 AMS64_08955 eeac0e5f8064fc4d1c9723a6623fe0f6 310 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 2.6E-63 T 11-10-2018 AMS64_08955 eeac0e5f8064fc4d1c9723a6623fe0f6 310 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 2.6E-63 T 11-10-2018 AMS64_08955 eeac0e5f8064fc4d1c9723a6623fe0f6 310 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 2.6E-63 T 11-10-2018 AMS64_08955 eeac0e5f8064fc4d1c9723a6623fe0f6 310 Gene3D G3DSA:3.40.1160.10 1 310 4.3E-115 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_08955 eeac0e5f8064fc4d1c9723a6623fe0f6 310 PIRSF PIRSF000723 1 310 9.2E-117 T 11-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMS64_08955 eeac0e5f8064fc4d1c9723a6623fe0f6 310 Pfam PF00696 Amino acid kinase family 3 282 2.2E-28 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMS64_08955 eeac0e5f8064fc4d1c9723a6623fe0f6 310 SUPERFAMILY SSF53633 3 308 1.96E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 SMART SM00387 402 518 9.2E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 Gene3D G3DSA:1.20.120.160 792 903 1.2E-24 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 Gene3D G3DSA:1.10.287.130 255 353 6.3E-30 T 11-10-2018 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 Gene3D G3DSA:3.40.50.2300 526 646 3.2E-5 T 11-10-2018 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 1.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 1.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 1.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 1.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 Gene3D G3DSA:3.40.50.2300 647 791 8.6E-40 T 11-10-2018 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 SMART SM00304 198 250 1.2E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 SUPERFAMILY SSF52172 663 819 1.71E-37 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 174 1.6E-51 T 11-10-2018 IPR019247 Histidine kinase BarA, N-terminal AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 1.3E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 Pfam PF00072 Response regulator receiver domain 667 778 3.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 Gene3D G3DSA:3.30.565.10 354 519 3.0E-52 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 SMART SM00448 665 778 3.3E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 SUPERFAMILY SSF47384 275 356 2.75E-22 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 SMART SM00388 290 355 1.3E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 SUPERFAMILY SSF55874 344 515 6.42E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 SUPERFAMILY SSF52172 529 646 5.98E-6 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 517 2.5E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 SUPERFAMILY SSF158472 199 248 1.83E-6 T 11-10-2018 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 SUPERFAMILY SSF47226 793 902 3.01E-12 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 Pfam PF01627 Hpt domain 812 896 2.4E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_04945 b7bbf37af735a8e9d966aa2a0cbf6023 905 Gene3D G3DSA:1.20.1480.50 161 254 1.4E-8 T 11-10-2018 AMS64_01465 d7eb82a09cf1d7404ca782b95b9fdf29 146 Pfam PF11008 Protein of unknown function (DUF2846) 17 118 4.8E-21 T 11-10-2018 IPR022548 Domain of unknown function DUF2846 AMS64_01465 d7eb82a09cf1d7404ca782b95b9fdf29 146 PIRSF PIRSF012335 1 146 4.7E-39 T 11-10-2018 IPR016596 Protein of unknown function UCP012335 AMS64_16265 3f394ee62e36802448eca983434d329f 270 SMART SM00304 203 256 3.9E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_16265 3f394ee62e36802448eca983434d329f 270 Gene3D G3DSA:1.10.287.130 202 265 7.0E-6 T 11-10-2018 AMS64_16265 3f394ee62e36802448eca983434d329f 270 Pfam PF00672 HAMP domain 204 252 5.8E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_16265 3f394ee62e36802448eca983434d329f 270 SUPERFAMILY SSF158472 204 253 2.22E-6 T 11-10-2018 AMS64_22565 c34968aa27bdc9c32dd0d4b15fd1227f 275 Gene3D G3DSA:3.30.420.10 106 255 4.5E-15 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_22565 c34968aa27bdc9c32dd0d4b15fd1227f 275 Pfam PF13276 HTH-like domain 33 83 1.6E-8 T 11-10-2018 IPR025948 HTH-like domain AMS64_22565 c34968aa27bdc9c32dd0d4b15fd1227f 275 SUPERFAMILY SSF53098 102 262 2.43E-42 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_22565 c34968aa27bdc9c32dd0d4b15fd1227f 275 Pfam PF00665 Integrase core domain 108 223 1.1E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_18455 c34968aa27bdc9c32dd0d4b15fd1227f 275 Gene3D G3DSA:3.30.420.10 106 255 4.5E-15 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_18455 c34968aa27bdc9c32dd0d4b15fd1227f 275 Pfam PF13276 HTH-like domain 33 83 1.6E-8 T 11-10-2018 IPR025948 HTH-like domain AMS64_18455 c34968aa27bdc9c32dd0d4b15fd1227f 275 SUPERFAMILY SSF53098 102 262 2.43E-42 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_18455 c34968aa27bdc9c32dd0d4b15fd1227f 275 Pfam PF00665 Integrase core domain 108 223 1.1E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_14205 c34968aa27bdc9c32dd0d4b15fd1227f 275 Gene3D G3DSA:3.30.420.10 106 255 4.5E-15 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_14205 c34968aa27bdc9c32dd0d4b15fd1227f 275 Pfam PF13276 HTH-like domain 33 83 1.6E-8 T 11-10-2018 IPR025948 HTH-like domain AMS64_14205 c34968aa27bdc9c32dd0d4b15fd1227f 275 SUPERFAMILY SSF53098 102 262 2.43E-42 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_14205 c34968aa27bdc9c32dd0d4b15fd1227f 275 Pfam PF00665 Integrase core domain 108 223 1.1E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_05730 b1a27329ff5419c4aecd2e03d1c140f6 223 Gene3D G3DSA:3.10.50.40 7 153 6.2E-53 T 11-10-2018 AMS64_05730 b1a27329ff5419c4aecd2e03d1c140f6 223 Gene3D G3DSA:2.40.10.330 71 120 6.2E-53 T 11-10-2018 AMS64_05730 b1a27329ff5419c4aecd2e03d1c140f6 223 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 134 6.6E-8 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMS64_05730 b1a27329ff5419c4aecd2e03d1c140f6 223 SUPERFAMILY SSF54534 3 139 2.36E-32 T 11-10-2018 AMS64_08845 2205b1680fdeb64385e713a2207569f4 456 Gene3D G3DSA:3.30.1330.90 10 158 2.5E-49 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AMS64_08845 2205b1680fdeb64385e713a2207569f4 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 450 6.1E-218 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AMS64_08845 2205b1680fdeb64385e713a2207569f4 456 Pfam PF03313 Serine dehydratase alpha chain 183 447 1.2E-96 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AMS64_08845 2205b1680fdeb64385e713a2207569f4 456 SUPERFAMILY SSF143548 16 156 1.54E-44 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AMS64_08845 2205b1680fdeb64385e713a2207569f4 456 Pfam PF03315 Serine dehydratase beta chain 3 154 6.2E-56 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AMS64_01485 a230ecb4bb699e2a213b9c66775441dc 521 Gene3D G3DSA:3.40.50.300 1 251 1.9E-56 T 11-10-2018 AMS64_01485 a230ecb4bb699e2a213b9c66775441dc 521 SMART SM00382 286 496 0.097 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_01485 a230ecb4bb699e2a213b9c66775441dc 521 SMART SM00382 33 221 2.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_01485 a230ecb4bb699e2a213b9c66775441dc 521 Pfam PF00005 ABC transporter 278 440 3.3E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_01485 a230ecb4bb699e2a213b9c66775441dc 521 SUPERFAMILY SSF52540 7 230 2.93E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01485 a230ecb4bb699e2a213b9c66775441dc 521 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_01485 a230ecb4bb699e2a213b9c66775441dc 521 Gene3D G3DSA:3.40.50.300 258 502 4.2E-37 T 11-10-2018 AMS64_01485 a230ecb4bb699e2a213b9c66775441dc 521 Pfam PF00005 ABC transporter 27 172 9.8E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_01485 a230ecb4bb699e2a213b9c66775441dc 521 SUPERFAMILY SSF52540 249 493 2.38E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_06065 8e13af47057cc9df0782516a68cb2f42 163 PIRSF PIRSF000194 1 163 3.0E-66 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 AMS64_06065 8e13af47057cc9df0782516a68cb2f42 163 Pfam PF00186 Dihydrofolate reductase 2 162 1.1E-62 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AMS64_06065 8e13af47057cc9df0782516a68cb2f42 163 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 AMS64_06065 8e13af47057cc9df0782516a68cb2f42 163 PRINTS PR00070 Dihydrofolate reductase signature 28 36 2.2E-15 T 11-10-2018 AMS64_06065 8e13af47057cc9df0782516a68cb2f42 163 PRINTS PR00070 Dihydrofolate reductase signature 94 108 2.2E-15 T 11-10-2018 AMS64_06065 8e13af47057cc9df0782516a68cb2f42 163 PRINTS PR00070 Dihydrofolate reductase signature 14 24 2.2E-15 T 11-10-2018 AMS64_06065 8e13af47057cc9df0782516a68cb2f42 163 PRINTS PR00070 Dihydrofolate reductase signature 41 52 2.2E-15 T 11-10-2018 AMS64_06065 8e13af47057cc9df0782516a68cb2f42 163 SUPERFAMILY SSF53597 1 163 7.85E-63 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMS64_06065 8e13af47057cc9df0782516a68cb2f42 163 Gene3D G3DSA:3.40.430.10 1 163 6.2E-62 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMS64_12740 15676d565c296cbd40347f82c0e129dd 314 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 3 311 8.1E-124 T 11-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AMS64_12740 15676d565c296cbd40347f82c0e129dd 314 Pfam PF03741 Integral membrane protein TerC family 77 279 2.4E-56 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AMS64_13445 eeac5e8e325cf5ff7b4c8d760e19582f 226 SUPERFAMILY SSF161098 6 214 3.53E-43 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_13445 eeac5e8e325cf5ff7b4c8d760e19582f 226 Gene3D G3DSA:1.10.3720.10 2 223 2.2E-47 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_13445 eeac5e8e325cf5ff7b4c8d760e19582f 226 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 215 3.8E-67 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AMS64_13445 eeac5e8e325cf5ff7b4c8d760e19582f 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 214 1.9E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_17060 9c31126bcf8ec3908074af1445269107 200 Pfam PF13560 Helix-turn-helix domain 24 79 1.0E-9 T 11-10-2018 AMS64_17060 9c31126bcf8ec3908074af1445269107 200 Gene3D G3DSA:2.60.120.10 91 199 2.1E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_17060 9c31126bcf8ec3908074af1445269107 200 SUPERFAMILY SSF51182 67 199 7.18E-31 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_17060 9c31126bcf8ec3908074af1445269107 200 Gene3D G3DSA:1.10.260.40 18 90 1.8E-14 T 11-10-2018 AMS64_17060 9c31126bcf8ec3908074af1445269107 200 SMART SM00530 27 82 8.3E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_17060 9c31126bcf8ec3908074af1445269107 200 SUPERFAMILY SSF47413 23 88 9.65E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_17060 9c31126bcf8ec3908074af1445269107 200 Pfam PF07883 Cupin domain 126 193 8.0E-19 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AMS64_00035 d434b4d11c717b37ef7391fd517944e6 301 Gene3D G3DSA:1.10.10.10 5 88 1.2E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_00035 d434b4d11c717b37ef7391fd517944e6 301 Gene3D G3DSA:3.40.190.290 91 287 6.3E-69 T 11-10-2018 AMS64_00035 d434b4d11c717b37ef7391fd517944e6 301 SUPERFAMILY SSF53850 90 291 1.14E-47 T 11-10-2018 AMS64_00035 d434b4d11c717b37ef7391fd517944e6 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 3.9E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_00035 d434b4d11c717b37ef7391fd517944e6 301 Pfam PF03466 LysR substrate binding domain 89 288 1.4E-47 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_00035 d434b4d11c717b37ef7391fd517944e6 301 SUPERFAMILY SSF46785 4 85 6.53E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 SMART SM00091 98 166 0.005 T 11-10-2018 IPR000014 PAS domain AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 422 9.4E-133 T 11-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 SUPERFAMILY SSF55874 259 425 4.98E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 3.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 3.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 3.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 3.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 Gene3D G3DSA:1.10.287.130 202 269 4.8E-21 T 11-10-2018 AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 Gene3D G3DSA:3.30.450.20 84 201 4.2E-7 T 11-10-2018 AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 6.9E-31 T 11-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 SUPERFAMILY SSF55785 87 197 9.95E-11 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 SMART SM00387 315 427 5.3E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 SMART SM00388 205 270 2.4E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 Gene3D G3DSA:3.30.565.10 284 428 1.1E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 Pfam PF00989 PAS fold 99 150 7.5E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 268 4.5E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 SUPERFAMILY SSF47384 192 268 1.45E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_17530 37cca766afacd0cac8e8fb806d0ca6d5 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 425 1.9E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_01705 9de2f4395084fa819478178b3d7aa69f 384 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_01705 9de2f4395084fa819478178b3d7aa69f 384 Gene3D G3DSA:2.40.50.940 241 305 7.2E-9 T 11-10-2018 AMS64_01705 9de2f4395084fa819478178b3d7aa69f 384 SUPERFAMILY SSF52540 22 260 1.91E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01705 9de2f4395084fa819478178b3d7aa69f 384 Pfam PF00005 ABC transporter 38 180 1.4E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_01705 9de2f4395084fa819478178b3d7aa69f 384 Gene3D G3DSA:3.40.50.300 22 240 5.5E-68 T 11-10-2018 AMS64_01705 9de2f4395084fa819478178b3d7aa69f 384 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 53 382 1.8E-128 T 11-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AMS64_01705 9de2f4395084fa819478178b3d7aa69f 384 SUPERFAMILY SSF50331 255 382 1.7E-16 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMS64_01705 9de2f4395084fa819478178b3d7aa69f 384 Gene3D G3DSA:2.40.50.140 306 357 7.2E-9 T 11-10-2018 AMS64_01705 9de2f4395084fa819478178b3d7aa69f 384 SMART SM00382 47 230 9.8E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_01705 9de2f4395084fa819478178b3d7aa69f 384 Pfam PF08402 TOBE domain 300 382 2.3E-14 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 SMART SM00896 701 794 3.6E-44 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 Gene3D G3DSA:3.30.56.10 7 179 3.2E-70 T 11-10-2018 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 SMART SM00874 403 471 3.1E-32 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 Gene3D G3DSA:3.30.930.10 486 690 2.9E-64 T 11-10-2018 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 Gene3D G3DSA:2.40.50.140 39 154 3.2E-70 T 11-10-2018 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 Gene3D G3DSA:3.30.70.380 702 795 7.4E-30 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 Pfam PF03483 B3/4 domain 213 385 4.0E-69 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 Pfam PF01588 Putative tRNA binding domain 45 145 3.9E-26 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 3.5E-28 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 SUPERFAMILY SSF50249 35 194 7.59E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 Gene3D G3DSA:3.30.56.10 401 475 6.1E-27 T 11-10-2018 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 SMART SM00873 212 385 3.9E-93 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 Gene3D G3DSA:3.50.40.10 197 395 1.1E-78 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.632 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.3E-276 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 SUPERFAMILY SSF46955 404 475 1.37E-21 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 8.4E-21 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 SUPERFAMILY SSF55681 467 690 4.42E-55 T 11-10-2018 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 SUPERFAMILY SSF56037 196 396 7.85E-75 T 11-10-2018 AMS64_09335 219287bc58547aba69f8547cd98ea07b 795 SUPERFAMILY SSF54991 697 794 1.14E-29 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AMS64_12440 76d7161f2c37f8bb93f337e0757e9c6d 300 SUPERFAMILY SSF53850 90 298 4.89E-41 T 11-10-2018 AMS64_12440 76d7161f2c37f8bb93f337e0757e9c6d 300 Gene3D G3DSA:1.10.10.10 1 87 7.3E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_12440 76d7161f2c37f8bb93f337e0757e9c6d 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 7.6E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12440 76d7161f2c37f8bb93f337e0757e9c6d 300 SUPERFAMILY SSF46785 6 113 2.22E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_12440 76d7161f2c37f8bb93f337e0757e9c6d 300 Gene3D G3DSA:3.40.190.10 164 266 8.7E-62 T 11-10-2018 AMS64_12440 76d7161f2c37f8bb93f337e0757e9c6d 300 Pfam PF03466 LysR substrate binding domain 89 295 1.6E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_12440 76d7161f2c37f8bb93f337e0757e9c6d 300 Gene3D G3DSA:3.40.190.10 93 293 8.7E-62 T 11-10-2018 AMS64_09315 a5015b0fd5d1192fd4fcdd86a191137f 154 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 153 26.18 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMS64_09315 a5015b0fd5d1192fd4fcdd86a191137f 154 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 66 151 2.6E-38 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AMS64_09315 a5015b0fd5d1192fd4fcdd86a191137f 154 SUPERFAMILY SSF54364 2 61 2.48E-22 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMS64_09315 a5015b0fd5d1192fd4fcdd86a191137f 154 Gene3D G3DSA:3.30.110.10 59 154 2.1E-38 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AMS64_09315 a5015b0fd5d1192fd4fcdd86a191137f 154 ProSitePatterns PS00938 Initiation factor 3 signature. 41 54 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AMS64_09315 a5015b0fd5d1192fd4fcdd86a191137f 154 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 4 59 9.7E-24 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMS64_09315 a5015b0fd5d1192fd4fcdd86a191137f 154 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 153 9.7E-68 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMS64_09315 a5015b0fd5d1192fd4fcdd86a191137f 154 SUPERFAMILY SSF55200 65 153 3.27E-35 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AMS64_09315 a5015b0fd5d1192fd4fcdd86a191137f 154 Gene3D G3DSA:3.10.20.80 1 58 1.0E-24 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMS64_08070 229e8c36ffa27623f5e419c4ef2a4065 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.2E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_08070 229e8c36ffa27623f5e419c4ef2a4065 301 Gene3D G3DSA:1.10.10.10 3 89 5.2E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_08070 229e8c36ffa27623f5e419c4ef2a4065 301 SUPERFAMILY SSF53850 92 293 5.61E-42 T 11-10-2018 AMS64_08070 229e8c36ffa27623f5e419c4ef2a4065 301 Pfam PF03466 LysR substrate binding domain 90 290 1.4E-40 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_08070 229e8c36ffa27623f5e419c4ef2a4065 301 Gene3D G3DSA:3.40.190.290 92 290 6.3E-55 T 11-10-2018 AMS64_08070 229e8c36ffa27623f5e419c4ef2a4065 301 SUPERFAMILY SSF46785 3 105 7.3E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_16635 3f7925866485f0dd819d765ed8724581 736 PRINTS PR00811 Bacterial general secretion pathway protein D signature 524 548 2.7E-16 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_16635 3f7925866485f0dd819d765ed8724581 736 PRINTS PR00811 Bacterial general secretion pathway protein D signature 465 475 2.7E-16 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_16635 3f7925866485f0dd819d765ed8724581 736 PRINTS PR00811 Bacterial general secretion pathway protein D signature 659 677 2.7E-16 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_16635 3f7925866485f0dd819d765ed8724581 736 PRINTS PR00811 Bacterial general secretion pathway protein D signature 682 696 2.7E-16 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_16635 3f7925866485f0dd819d765ed8724581 736 PRINTS PR00811 Bacterial general secretion pathway protein D signature 559 569 2.7E-16 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_16635 3f7925866485f0dd819d765ed8724581 736 PRINTS PR01032 Gene IV protein signature 549 572 1.8E-6 T 11-10-2018 AMS64_16635 3f7925866485f0dd819d765ed8724581 736 PRINTS PR01032 Gene IV protein signature 675 697 1.8E-6 T 11-10-2018 AMS64_16635 3f7925866485f0dd819d765ed8724581 736 PRINTS PR01032 Gene IV protein signature 622 650 1.8E-6 T 11-10-2018 AMS64_16635 3f7925866485f0dd819d765ed8724581 736 Gene3D G3DSA:3.30.1370.120 100 266 6.6E-10 T 11-10-2018 IPR038591 NolW-like superfamily AMS64_16635 3f7925866485f0dd819d765ed8724581 736 Pfam PF03958 Bacterial type II/III secretion system short domain 355 463 6.4E-10 T 11-10-2018 IPR005644 NolW-like AMS64_16635 3f7925866485f0dd819d765ed8724581 736 Pfam PF00263 Bacterial type II and III secretion system protein 531 695 3.2E-44 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AMS64_03295 28d1a4e4ffacad00533d47785e259016 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 59 19.08 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AMS64_03295 28d1a4e4ffacad00533d47785e259016 64 Pfam PF03884 DNA gyrase inhibitor YacG 5 51 5.1E-26 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AMS64_03295 28d1a4e4ffacad00533d47785e259016 64 SUPERFAMILY SSF57716 2 52 5.42E-21 T 11-10-2018 AMS64_03295 28d1a4e4ffacad00533d47785e259016 64 Gene3D G3DSA:3.30.50.10 1 62 6.7E-25 T 11-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 SMART SM00363 338 399 3.8E-4 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 399 4.6E-120 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 Pfam PF01479 S4 domain 341 382 1.2E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 SUPERFAMILY SSF52374 7 317 2.17E-95 T 11-10-2018 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 SUPERFAMILY SSF55174 298 398 3.93E-17 T 11-10-2018 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 Gene3D G3DSA:1.10.240.10 218 327 1.9E-34 T 11-10-2018 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 2.5E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 2.5E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.5E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.5E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 4.6E-73 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 47.38 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 Gene3D G3DSA:3.40.50.620 5 217 1.2E-71 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_17825 1fe07aabcc2a90833cc618e45080f214 399 Gene3D G3DSA:3.10.290.10 328 398 6.6E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMS64_11410 e140777d32510814e43b656773af6c28 809 Pfam PF12704 MacB-like periplasmic core domain 473 647 6.3E-10 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AMS64_11410 e140777d32510814e43b656773af6c28 809 Pfam PF02687 FtsX-like permease family 719 808 5.2E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMS64_14805 ccaf6b8c881fdcddc47f4e9170378e3c 349 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 342 3.5E-92 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AMS64_06270 00d1ff420b7f4ded1a8db0d08497d9c1 215 SUPERFAMILY SSF54423 4 58 6.67E-10 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AMS64_06270 00d1ff420b7f4ded1a8db0d08497d9c1 215 Gene3D G3DSA:3.40.30.10 61 204 6.2E-6 T 11-10-2018 AMS64_06270 00d1ff420b7f4ded1a8db0d08497d9c1 215 Gene3D G3DSA:3.10.450.70 1 60 7.0E-12 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AMS64_06270 00d1ff420b7f4ded1a8db0d08497d9c1 215 Pfam PF10411 Disulfide bond isomerase protein N-terminus 7 57 1.0E-11 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AMS64_06270 00d1ff420b7f4ded1a8db0d08497d9c1 215 SUPERFAMILY SSF52833 93 203 9.91E-6 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 SMART SM00304 170 222 6.7E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 SUPERFAMILY SSF158472 170 221 3.14E-5 T 11-10-2018 AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 SMART SM00388 223 283 1.3E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 Gene3D G3DSA:1.10.287.130 167 278 5.7E-25 T 11-10-2018 AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 SUPERFAMILY SSF55874 284 430 4.98E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 282 1.1E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 428 2.3E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 SUPERFAMILY SSF47384 206 283 3.34E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 SMART SM00387 322 430 1.0E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 8.4E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 8.4E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 Gene3D G3DSA:3.30.565.10 285 433 2.8E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_01945 0a637ca891f833814b5f9fbbfff17a78 436 Pfam PF00672 HAMP domain 170 217 9.7E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_11240 e54c39f0e9ce22e3278d4ee5f6046cec 253 SUPERFAMILY SSF53474 37 229 9.76E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_11240 e54c39f0e9ce22e3278d4ee5f6046cec 253 PIRSF PIRSF029063 11 232 4.3E-66 T 11-10-2018 IPR011225 Type IV secretory pathway, VirJ component AMS64_11240 e54c39f0e9ce22e3278d4ee5f6046cec 253 Gene3D G3DSA:3.40.50.1820 30 230 1.4E-13 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_11240 e54c39f0e9ce22e3278d4ee5f6046cec 253 Pfam PF06057 Bacterial virulence protein (VirJ) 44 226 8.7E-56 T 11-10-2018 IPR010333 Bacterial virulence AMS64_10005 a5a0c4b7dd75a2d84fb38b06b63140b8 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 2.7E-131 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMS64_10005 a5a0c4b7dd75a2d84fb38b06b63140b8 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AMS64_10005 a5a0c4b7dd75a2d84fb38b06b63140b8 436 Gene3D G3DSA:3.40.47.10 6 435 7.7E-114 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_10005 a5a0c4b7dd75a2d84fb38b06b63140b8 436 Pfam PF00108 Thiolase, N-terminal domain 15 287 8.5E-61 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMS64_10005 a5a0c4b7dd75a2d84fb38b06b63140b8 436 PIRSF PIRSF000429 9 436 2.3E-118 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMS64_10005 a5a0c4b7dd75a2d84fb38b06b63140b8 436 SUPERFAMILY SSF53901 15 295 3.27E-61 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_10005 a5a0c4b7dd75a2d84fb38b06b63140b8 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMS64_10005 a5a0c4b7dd75a2d84fb38b06b63140b8 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 4.8E-257 T 11-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AMS64_10005 a5a0c4b7dd75a2d84fb38b06b63140b8 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 70.004 T 11-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AMS64_10005 a5a0c4b7dd75a2d84fb38b06b63140b8 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 2.2E-36 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMS64_10005 a5a0c4b7dd75a2d84fb38b06b63140b8 436 SUPERFAMILY SSF53901 296 435 3.12E-33 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_02695 201938e6c2be60e5e16143745195b061 839 PIRSF PIRSF001444 1 838 0.0 T 11-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AMS64_02695 201938e6c2be60e5e16143745195b061 839 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 600 614 - T 11-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 AMS64_02695 201938e6c2be60e5e16143745195b061 839 Pfam PF01295 Adenylate cyclase, class-I 227 824 1.5E-252 T 11-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AMS64_02695 201938e6c2be60e5e16143745195b061 839 Pfam PF12633 Adenylate cyclase NT domain 5 200 1.2E-75 T 11-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 AMS64_02695 201938e6c2be60e5e16143745195b061 839 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 241 252 - T 11-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 AMS64_19945 0bd7976ee3311cf4cc4eb7f5a3040331 484 Pfam PF05762 VWA domain containing CoxE-like protein 321 451 2.7E-12 T 11-10-2018 IPR008912 Uncharacterised protein family CoxE-like AMS64_19945 0bd7976ee3311cf4cc4eb7f5a3040331 484 Gene3D G3DSA:3.40.50.410 322 466 2.0E-7 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_19945 0bd7976ee3311cf4cc4eb7f5a3040331 484 SUPERFAMILY SSF53300 320 456 5.93E-18 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_19945 0bd7976ee3311cf4cc4eb7f5a3040331 484 SMART SM00327 320 483 6.2E-5 T 11-10-2018 IPR002035 von Willebrand factor, type A AMS64_16910 d22adfdb525eaa8f0a4e26066d871bc1 177 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 172 1.1E-36 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AMS64_05110 39aad1db8727acd753d20c9de4f7d644 230 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 227 1.6E-75 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMS64_05110 39aad1db8727acd753d20c9de4f7d644 230 Gene3D G3DSA:3.90.550.10 6 230 9.3E-72 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_05110 39aad1db8727acd753d20c9de4f7d644 230 SUPERFAMILY SSF53448 11 227 9.13E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_05110 39aad1db8727acd753d20c9de4f7d644 230 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 225 1.4E-73 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMS64_05110 39aad1db8727acd753d20c9de4f7d644 230 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMS64_05110 39aad1db8727acd753d20c9de4f7d644 230 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 9 226 44.485 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMS64_06045 3a55a8c91f1ff76ce5f1716d1f0a9e99 176 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AMS64_06045 3a55a8c91f1ff76ce5f1716d1f0a9e99 176 SUPERFAMILY SSF53218 3 167 1.57E-47 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMS64_06045 3a55a8c91f1ff76ce5f1716d1f0a9e99 176 Pfam PF00994 Probable molybdopterin binding domain 7 151 9.0E-33 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_06045 3a55a8c91f1ff76ce5f1716d1f0a9e99 176 Gene3D G3DSA:3.40.980.10 1 176 9.6E-67 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMS64_06045 3a55a8c91f1ff76ce5f1716d1f0a9e99 176 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 1.3E-40 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_06045 3a55a8c91f1ff76ce5f1716d1f0a9e99 176 SMART SM00852 7 153 6.0E-30 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_05435 7855feb446543d2ea381b6730b469faa 302 SUPERFAMILY SSF101790 220 300 2.03E-22 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMS64_05435 7855feb446543d2ea381b6730b469faa 302 SUPERFAMILY SSF103025 13 218 1.54E-50 T 11-10-2018 AMS64_05435 7855feb446543d2ea381b6730b469faa 302 Pfam PF01571 Aminomethyltransferase folate-binding domain 17 118 3.1E-6 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AMS64_05435 7855feb446543d2ea381b6730b469faa 302 Gene3D G3DSA:3.30.70.1400 20 105 7.6E-33 T 11-10-2018 AMS64_05435 7855feb446543d2ea381b6730b469faa 302 Gene3D G3DSA:2.40.30.160 173 293 6.7E-39 T 11-10-2018 AMS64_05435 7855feb446543d2ea381b6730b469faa 302 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 165 228 4.1E-25 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site AMS64_05435 7855feb446543d2ea381b6730b469faa 302 Gene3D G3DSA:3.30.70.1630 17 157 7.6E-33 T 11-10-2018 AMS64_09795 b1d0c0002311ca79d735b771ebc1ddd0 268 Gene3D G3DSA:3.30.470.10 1 106 1.4E-27 T 11-10-2018 AMS64_09795 b1d0c0002311ca79d735b771ebc1ddd0 268 SUPERFAMILY SSF56752 3 253 4.71E-65 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AMS64_09795 b1d0c0002311ca79d735b771ebc1ddd0 268 Pfam PF01063 Amino-transferase class IV 23 246 4.8E-45 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AMS64_09795 b1d0c0002311ca79d735b771ebc1ddd0 268 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 2 262 2.4E-101 T 11-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AMS64_09795 b1d0c0002311ca79d735b771ebc1ddd0 268 Gene3D G3DSA:3.20.10.10 112 267 2.1E-48 T 11-10-2018 AMS64_13680 07daa9d7491c1a29c3c6ea34e6c830cc 779 SUPERFAMILY SSF47203 318 470 1.16E-20 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMS64_13680 07daa9d7491c1a29c3c6ea34e6c830cc 779 SUPERFAMILY SSF56645 77 313 2.36E-47 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMS64_13680 07daa9d7491c1a29c3c6ea34e6c830cc 779 Gene3D G3DSA:1.20.140.10 318 463 1.6E-93 T 11-10-2018 AMS64_13680 07daa9d7491c1a29c3c6ea34e6c830cc 779 Pfam PF09317 Domain of unknown function (DUF1974) 472 756 8.8E-111 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AMS64_13680 07daa9d7491c1a29c3c6ea34e6c830cc 779 Gene3D G3DSA:2.40.110.10 194 317 1.6E-93 T 11-10-2018 AMS64_13680 07daa9d7491c1a29c3c6ea34e6c830cc 779 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 80 190 5.0E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMS64_13680 07daa9d7491c1a29c3c6ea34e6c830cc 779 Gene3D G3DSA:1.10.540.10 80 193 1.6E-93 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMS64_13680 07daa9d7491c1a29c3c6ea34e6c830cc 779 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 195 295 4.3E-11 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMS64_13680 07daa9d7491c1a29c3c6ea34e6c830cc 779 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 318 459 1.3E-9 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMS64_15800 619baf63aae8baae7d31820ceafac35e 139 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AMS64_15800 619baf63aae8baae7d31820ceafac35e 139 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.4E-49 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AMS64_15800 619baf63aae8baae7d31820ceafac35e 139 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 136 1.2E-12 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMS64_15800 619baf63aae8baae7d31820ceafac35e 139 Pfam PF00460 Flagella basal body rod protein 7 32 1.1E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMS64_21810 2d7bb4f1aa1329c862257e4bc8b9e0ba 217 Gene3D G3DSA:3.40.50.720 1 137 1.2E-36 T 11-10-2018 AMS64_21810 2d7bb4f1aa1329c862257e4bc8b9e0ba 217 Gene3D G3DSA:3.30.70.1450 138 213 1.0E-8 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_21810 2d7bb4f1aa1329c862257e4bc8b9e0ba 217 Pfam PF02254 TrkA-N domain 5 120 3.3E-28 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMS64_21810 2d7bb4f1aa1329c862257e4bc8b9e0ba 217 SUPERFAMILY SSF116726 136 216 9.16E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_21810 2d7bb4f1aa1329c862257e4bc8b9e0ba 217 SUPERFAMILY SSF51735 3 134 4.37E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_14755 901ab264800d40d3f24d2506ed813e27 477 SUPERFAMILY SSF48452 302 444 1.14E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_14755 901ab264800d40d3f24d2506ed813e27 477 Pfam PF01435 Peptidase family M48 64 249 2.5E-29 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMS64_14755 901ab264800d40d3f24d2506ed813e27 477 Pfam PF14559 Tetratricopeptide repeat 345 409 2.1E-8 T 11-10-2018 AMS64_14755 901ab264800d40d3f24d2506ed813e27 477 Gene3D G3DSA:1.25.40.10 266 475 2.9E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_14755 901ab264800d40d3f24d2506ed813e27 477 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 475 37.037 T 11-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AMS64_03805 cf781cae595b2fa44c130836d1bbaeea 152 Pfam PF02142 MGS-like domain 34 118 8.2E-17 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AMS64_03805 cf781cae595b2fa44c130836d1bbaeea 152 SMART SM00851 25 118 9.5E-19 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AMS64_03805 cf781cae595b2fa44c130836d1bbaeea 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 31.525 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AMS64_03805 cf781cae595b2fa44c130836d1bbaeea 152 Gene3D G3DSA:3.40.50.1380 1 152 9.1E-62 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMS64_03805 cf781cae595b2fa44c130836d1bbaeea 152 PIRSF PIRSF006614 8 151 1.5E-61 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AMS64_03805 cf781cae595b2fa44c130836d1bbaeea 152 SUPERFAMILY SSF52335 6 147 1.4E-54 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMS64_03805 cf781cae595b2fa44c130836d1bbaeea 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 11-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AMS64_03805 cf781cae595b2fa44c130836d1bbaeea 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 7.1E-61 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 245 589 9.6E-110 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 132 242 1.4E-15 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 338 355 2.5E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 409 422 2.5E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 387 405 2.5E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 588 2.5E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 553 569 2.5E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 206 226 2.5E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 239 256 2.5E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 268 289 2.5E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 Gene3D G3DSA:3.20.20.80 243 618 3.1E-133 T 11-10-2018 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 Gene3D G3DSA:3.30.379.10 121 241 2.6E-17 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 SUPERFAMILY SSF55545 130 244 4.71E-18 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMS64_06995 53d5a81fc16e0083047bdf3266b6059a 621 SUPERFAMILY SSF51445 245 602 4.05E-124 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_21725 2d09692079dbee98ce97421f2770938d 126 SUPERFAMILY SSF55298 1 126 7.54E-49 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_21725 2d09692079dbee98ce97421f2770938d 126 Gene3D G3DSA:3.30.1330.40 1 126 5.1E-55 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMS64_21725 2d09692079dbee98ce97421f2770938d 126 Pfam PF01042 Endoribonuclease L-PSP 9 125 3.0E-44 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMS64_21725 2d09692079dbee98ce97421f2770938d 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 125 4.6E-55 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 AMS64_15500 84ec4d6dd1fe9d978dd97de60080742a 260 Pfam PF12571 Phage tail-collar fibre protein 5 154 1.0E-26 T 11-10-2018 IPR022225 Phage tail fibre protein AMS64_22140 84ec4d6dd1fe9d978dd97de60080742a 260 Pfam PF12571 Phage tail-collar fibre protein 5 154 1.0E-26 T 11-10-2018 IPR022225 Phage tail fibre protein AMS64_12090 ae59aa18fb4fb7baa1b814b8915bbd59 415 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 34 377 3.5E-74 T 11-10-2018 IPR006427 Phage portal protein, HK97 AMS64_12090 ae59aa18fb4fb7baa1b814b8915bbd59 415 Gene3D G3DSA:1.20.1270.210 38 311 2.4E-8 T 11-10-2018 AMS64_12090 ae59aa18fb4fb7baa1b814b8915bbd59 415 Gene3D G3DSA:3.30.1120.70 202 256 2.4E-8 T 11-10-2018 AMS64_12090 ae59aa18fb4fb7baa1b814b8915bbd59 415 Gene3D G3DSA:2.40.500.30 60 316 2.4E-8 T 11-10-2018 AMS64_12090 ae59aa18fb4fb7baa1b814b8915bbd59 415 Pfam PF04860 Phage portal protein 44 371 1.1E-93 T 11-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein AMS64_13610 2d89edd796b5f64e01b25b9e2f1de14a 709 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 33 642 3.0E-104 T 11-10-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY AMS64_16465 717427d9f2535cd829a0846eb0adbfe0 242 PRINTS PR01837 MgtC/SapB protein signature 22 41 4.5E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMS64_16465 717427d9f2535cd829a0846eb0adbfe0 242 PRINTS PR01837 MgtC/SapB protein signature 98 122 4.5E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMS64_16465 717427d9f2535cd829a0846eb0adbfe0 242 PRINTS PR01837 MgtC/SapB protein signature 71 93 4.5E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMS64_16465 717427d9f2535cd829a0846eb0adbfe0 242 PRINTS PR01837 MgtC/SapB protein signature 41 59 4.5E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMS64_16465 717427d9f2535cd829a0846eb0adbfe0 242 Pfam PF02308 MgtC family 19 143 3.3E-35 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMS64_14690 79dcf399e204742688a1e6d4a59108c2 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 51 65 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_14690 79dcf399e204742688a1e6d4a59108c2 219 SUPERFAMILY SSF55120 3 200 3.04E-46 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_14690 79dcf399e204742688a1e6d4a59108c2 219 Pfam PF00849 RNA pseudouridylate synthase 11 157 6.0E-24 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_14690 79dcf399e204742688a1e6d4a59108c2 219 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 214 2.2E-73 T 11-10-2018 IPR006508 Pseudouridine synthase, RluA-like AMS64_14690 79dcf399e204742688a1e6d4a59108c2 219 Gene3D G3DSA:3.30.2350.10 1 200 7.3E-49 T 11-10-2018 AMS64_12795 d7278de7d99f5f81b4a1c8d56439bf89 282 SUPERFAMILY SSF117396 1 262 5.49E-73 T 11-10-2018 IPR036520 UPF0759 superfamily AMS64_12795 d7278de7d99f5f81b4a1c8d56439bf89 282 Gene3D G3DSA:3.20.20.410 1 269 2.9E-45 T 11-10-2018 IPR036520 UPF0759 superfamily AMS64_12795 d7278de7d99f5f81b4a1c8d56439bf89 282 Pfam PF01904 Protein of unknown function DUF72 24 259 6.6E-58 T 11-10-2018 IPR002763 Protein of unknown function DUF72 AMS64_12685 34e1ac919756ca63b7a49a9fee12a7b8 217 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.4E-57 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AMS64_12685 34e1ac919756ca63b7a49a9fee12a7b8 217 Gene3D G3DSA:3.40.50.1360 7 207 8.0E-76 T 11-10-2018 AMS64_12685 34e1ac919756ca63b7a49a9fee12a7b8 217 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 1.7E-66 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AMS64_12685 34e1ac919756ca63b7a49a9fee12a7b8 217 SUPERFAMILY SSF75445 127 198 1.7E-23 T 11-10-2018 AMS64_12685 34e1ac919756ca63b7a49a9fee12a7b8 217 Gene3D G3DSA:3.30.70.260 125 196 8.0E-76 T 11-10-2018 AMS64_12685 34e1ac919756ca63b7a49a9fee12a7b8 217 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 32.572 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AMS64_12685 34e1ac919756ca63b7a49a9fee12a7b8 217 SUPERFAMILY SSF100950 1 147 1.78E-45 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AMS64_12365 60b0908a487c92015fb9ab7881d068c7 172 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 164 8.5E-45 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 AMS64_12585 97c4d485d4d37ed7d307449b85e02fde 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 191 1.4E-59 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMS64_12585 97c4d485d4d37ed7d307449b85e02fde 193 PIRSF PIRSF006102 1 193 1.1E-61 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMS64_12585 97c4d485d4d37ed7d307449b85e02fde 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.148 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 AMS64_12585 97c4d485d4d37ed7d307449b85e02fde 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-88 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 AMS64_18885 0184e29ace63758d50bb1b2419013a70 164 SUPERFAMILY SSF101307 14 160 2.88E-44 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 AMS64_18885 0184e29ace63758d50bb1b2419013a70 164 Pfam PF04608 Phosphatidylglycerophosphatase A 20 159 2.1E-50 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AMS64_18885 0184e29ace63758d50bb1b2419013a70 164 PIRSF PIRSF006162 10 164 1.6E-47 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AMS64_16250 5f79cefb33eccc686461d1b5fd71445b 398 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 25 383 1.9E-133 T 11-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AMS64_16250 5f79cefb33eccc686461d1b5fd71445b 398 Gene3D G3DSA:3.90.1150.10 46 380 1.8E-123 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_16250 5f79cefb33eccc686461d1b5fd71445b 398 SUPERFAMILY SSF53383 16 383 2.66E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_16250 5f79cefb33eccc686461d1b5fd71445b 398 Pfam PF00155 Aminotransferase class I and II 45 383 8.2E-55 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMS64_16250 5f79cefb33eccc686461d1b5fd71445b 398 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 8 387 47.833 T 11-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AMS64_16250 5f79cefb33eccc686461d1b5fd71445b 398 Gene3D G3DSA:3.40.640.10 62 289 1.8E-123 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_16250 5f79cefb33eccc686461d1b5fd71445b 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 238 247 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AMS64_00840 dce6198390b9bf07a0c993d5ddc352b3 373 Gene3D G3DSA:3.40.50.2300 31 347 1.6E-119 T 11-10-2018 AMS64_00840 dce6198390b9bf07a0c993d5ddc352b3 373 Pfam PF13458 Periplasmic binding protein 29 367 1.2E-66 T 11-10-2018 IPR028081 Leucine-binding protein domain AMS64_00840 dce6198390b9bf07a0c993d5ddc352b3 373 SUPERFAMILY SSF53822 28 368 1.06E-94 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_00840 dce6198390b9bf07a0c993d5ddc352b3 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 281 294 4.4E-48 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMS64_00840 dce6198390b9bf07a0c993d5ddc352b3 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 4.4E-48 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMS64_00840 dce6198390b9bf07a0c993d5ddc352b3 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 89 4.4E-48 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMS64_00840 dce6198390b9bf07a0c993d5ddc352b3 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 258 276 4.4E-48 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMS64_00840 dce6198390b9bf07a0c993d5ddc352b3 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 4.4E-48 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMS64_00840 dce6198390b9bf07a0c993d5ddc352b3 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 4.4E-48 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMS64_00840 dce6198390b9bf07a0c993d5ddc352b3 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 92 102 4.4E-48 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMS64_00840 dce6198390b9bf07a0c993d5ddc352b3 373 Gene3D G3DSA:3.40.50.2300 148 276 1.6E-119 T 11-10-2018 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 7.4E-54 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 7.4E-54 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 7.4E-54 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 PRINTS PR00474 Glutamate 5-kinase family signature 41 55 7.4E-54 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 7.4E-54 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 Pfam PF00696 Amino acid kinase family 5 233 9.1E-43 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 Gene3D G3DSA:3.40.1160.10 1 260 3.0E-89 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_19280 43e771e1886f1c7340c08906a3903552 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 262 36.696 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 Gene3D G3DSA:2.30.130.10 265 367 1.8E-32 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 4 366 1.5E-146 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 Pfam PF01472 PUA domain 276 350 3.5E-22 T 11-10-2018 IPR002478 PUA domain GO:0003723 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 SMART SM00359 276 359 1.7E-18 T 11-10-2018 IPR002478 PUA domain GO:0003723 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 SUPERFAMILY SSF88697 275 366 4.59E-24 T 11-10-2018 IPR015947 PUA-like superfamily AMS64_19280 43e771e1886f1c7340c08906a3903552 367 PIRSF PIRSF000729 1 367 1.3E-137 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AMS64_19280 43e771e1886f1c7340c08906a3903552 367 SUPERFAMILY SSF53633 4 254 6.68E-69 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_07600 74f5c0e294221b58a03d565ae6ce658d 306 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 80 94 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMS64_07600 74f5c0e294221b58a03d565ae6ce658d 306 Gene3D G3DSA:3.30.70.1560 109 208 9.3E-43 T 11-10-2018 AMS64_07600 74f5c0e294221b58a03d565ae6ce658d 306 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 49 218 3.1E-56 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMS64_07600 74f5c0e294221b58a03d565ae6ce658d 306 Pfam PF00849 RNA pseudouridylate synthase 45 189 2.3E-17 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_07600 74f5c0e294221b58a03d565ae6ce658d 306 SUPERFAMILY SSF55120 38 222 3.36E-45 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_07600 74f5c0e294221b58a03d565ae6ce658d 306 Gene3D G3DSA:3.30.70.580 34 108 1.3E-27 T 11-10-2018 AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 SMART SM00267 536 711 3.4E-40 T 11-10-2018 IPR000160 GGDEF domain AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 SUPERFAMILY SSF55073 552 712 4.24E-36 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 Gene3D G3DSA:3.20.20.450 724 975 2.4E-98 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 Pfam PF00563 EAL domain 727 962 4.7E-73 T 11-10-2018 IPR001633 EAL domain AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 426 541 9.5E-21 T 11-10-2018 IPR000014 PAS domain AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 Gene3D G3DSA:3.30.70.270 546 723 5.9E-48 T 11-10-2018 AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 Gene3D G3DSA:3.30.450.40 109 254 3.5E-8 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 Gene3D G3DSA:3.30.450.20 416 545 4.8E-26 T 11-10-2018 AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 SMART SM00052 721 967 1.6E-106 T 11-10-2018 IPR001633 EAL domain AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 Gene3D G3DSA:3.30.450.40 279 415 1.0E-5 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 Pfam PF13426 PAS domain 433 535 9.4E-16 T 11-10-2018 IPR000014 PAS domain AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 SMART SM00086 494 536 2.2E-5 T 11-10-2018 IPR001610 PAC motif AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 Pfam PF01590 GAF domain 126 252 2.8E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 SUPERFAMILY SSF141868 727 974 3.14E-87 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 SUPERFAMILY SSF55781 281 423 1.26E-9 T 11-10-2018 AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 SMART SM00091 422 488 7.0E-8 T 11-10-2018 IPR000014 PAS domain AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 SUPERFAMILY SSF55781 128 253 7.85E-11 T 11-10-2018 AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 543 709 1.6E-27 T 11-10-2018 IPR000160 GGDEF domain AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 Pfam PF00990 Diguanylate cyclase, GGDEF domain 547 706 4.2E-35 T 11-10-2018 IPR000160 GGDEF domain AMS64_15150 57fc9ddfb24fc06bba44adcad4a53236 978 SUPERFAMILY SSF55785 433 545 5.58E-23 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_16625 26c2707c1b6cf55406d359e8291610d0 267 Pfam PF01061 ABC-2 type transporter 16 228 1.5E-32 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMS64_16625 26c2707c1b6cf55406d359e8291610d0 267 PIRSF PIRSF006648 3 261 3.3E-18 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMS64_21305 45a1ec35a444475c1e214a3e403a5816 240 Pfam PF01914 MarC family integral membrane protein 4 204 1.9E-45 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMS64_21305 45a1ec35a444475c1e214a3e403a5816 240 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 201 4.1E-30 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMS64_20180 4c294c41aa3967fcda703746ff81081a 150 SUPERFAMILY SSF54534 4 143 2.55E-33 T 11-10-2018 AMS64_20180 4c294c41aa3967fcda703746ff81081a 150 Gene3D G3DSA:3.10.50.40 14 141 5.5E-40 T 11-10-2018 AMS64_20180 4c294c41aa3967fcda703746ff81081a 150 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 9.6E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMS64_20180 4c294c41aa3967fcda703746ff81081a 150 Gene3D G3DSA:2.40.10.330 73 129 5.5E-40 T 11-10-2018 AMS64_14245 8afec1ce02d3c2b58cf511bed855c9b0 191 Pfam PF01923 Cobalamin adenosyltransferase 3 168 1.7E-53 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMS64_14245 8afec1ce02d3c2b58cf511bed855c9b0 191 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 180 1.2E-50 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMS64_14245 8afec1ce02d3c2b58cf511bed855c9b0 191 SUPERFAMILY SSF89028 1 181 6.08E-56 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMS64_14245 8afec1ce02d3c2b58cf511bed855c9b0 191 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 182 3.0E-23 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMS64_14245 8afec1ce02d3c2b58cf511bed855c9b0 191 Gene3D G3DSA:1.20.1200.10 12 186 1.0E-53 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMS64_04495 f86a8b926160da974bdbd315ae6f8785 377 SUPERFAMILY SSF74653 287 374 8.24E-19 T 11-10-2018 AMS64_04495 f86a8b926160da974bdbd315ae6f8785 377 TIGRFAM TIGR02794 tolA_full: protein TolA 11 375 3.2E-70 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AMS64_04495 f86a8b926160da974bdbd315ae6f8785 377 Gene3D G3DSA:3.30.1150.10 278 376 2.6E-26 T 11-10-2018 AMS64_04495 f86a8b926160da974bdbd315ae6f8785 377 Pfam PF06519 TolA C-terminal 279 372 1.8E-23 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AMS64_02840 e4d398f4b58969624e12aadd2b52bb86 288 Gene3D G3DSA:3.40.50.300 1 165 2.1E-5 T 11-10-2018 AMS64_02840 e4d398f4b58969624e12aadd2b52bb86 288 SUPERFAMILY SSF52540 1 154 1.6E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_02840 e4d398f4b58969624e12aadd2b52bb86 288 PIRSF PIRSF005052 1 286 3.4E-109 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AMS64_02840 e4d398f4b58969624e12aadd2b52bb86 288 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 40.728 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AMS64_02840 e4d398f4b58969624e12aadd2b52bb86 288 Pfam PF03668 P-loop ATPase protein family 1 283 2.1E-108 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 Gene3D G3DSA:3.10.20.590 797 857 4.1E-24 T 11-10-2018 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 SUPERFAMILY SSF52374 7 666 7.97E-141 T 11-10-2018 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 7 857 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 652 6.3E-7 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 416 571 3.3E-8 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 3.9E-27 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 4.9E-53 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.9E-53 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.9E-53 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 4.9E-53 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 4.9E-53 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.9E-53 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.9E-53 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 SUPERFAMILY SSF50677 226 414 7.74E-56 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 Gene3D G3DSA:3.40.50.620 33 565 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 Pfam PF08264 Anticodon-binding domain of tRNA 698 817 1.2E-16 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 Gene3D G3DSA:3.90.740.10 227 413 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 Gene3D G3DSA:1.10.730.10 8 789 0.0 T 11-10-2018 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 5.4E-80 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 SUPERFAMILY SSF47323 661 857 1.7E-36 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 Gene3D G3DSA:3.10.330.110 566 627 0.0 T 11-10-2018 AMS64_06230 82c4e090220eeff4e6862a1eb91204a3 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.415 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMS64_20880 d793deaa4733c1a662766f414704bc2c 189 Gene3D G3DSA:1.10.260.40 1 78 1.1E-18 T 11-10-2018 AMS64_20880 d793deaa4733c1a662766f414704bc2c 189 Pfam PF01381 Helix-turn-helix 14 64 1.6E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_20880 d793deaa4733c1a662766f414704bc2c 189 SUPERFAMILY SSF51182 59 186 4.21E-24 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_20880 d793deaa4733c1a662766f414704bc2c 189 Gene3D G3DSA:2.60.120.10 93 188 6.4E-29 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_20880 d793deaa4733c1a662766f414704bc2c 189 Pfam PF07883 Cupin domain 113 178 1.7E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AMS64_20880 d793deaa4733c1a662766f414704bc2c 189 SMART SM00530 11 66 3.8E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_20880 d793deaa4733c1a662766f414704bc2c 189 SUPERFAMILY SSF47413 2 70 4.56E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_01970 6e5ee782b93b78cbea476feb13e5fd26 100 Gene3D G3DSA:3.30.70.330 1 100 2.7E-38 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMS64_01970 6e5ee782b93b78cbea476feb13e5fd26 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.883 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMS64_01970 6e5ee782b93b78cbea476feb13e5fd26 100 Pfam PF00276 Ribosomal protein L23 9 95 1.3E-31 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMS64_01970 6e5ee782b93b78cbea476feb13e5fd26 100 SUPERFAMILY SSF54189 3 93 1.33E-31 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01970 6e5ee782b93b78cbea476feb13e5fd26 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 11-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_05335 641975fccac8a8bdaa4b9a1d33b9b195 148 Gene3D G3DSA:3.40.630.30 7 138 4.7E-40 T 11-10-2018 AMS64_05335 641975fccac8a8bdaa4b9a1d33b9b195 148 Pfam PF00583 Acetyltransferase (GNAT) family 42 127 4.9E-12 T 11-10-2018 IPR000182 GNAT domain AMS64_05335 641975fccac8a8bdaa4b9a1d33b9b195 148 SUPERFAMILY SSF55729 20 129 1.57E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_00320 847d22838f3e0413d78eb66a2a5bf3b1 377 Gene3D G3DSA:2.40.30.170 57 279 1.8E-71 T 11-10-2018 AMS64_00320 847d22838f3e0413d78eb66a2a5bf3b1 377 Gene3D G3DSA:2.40.50.100 68 196 1.8E-71 T 11-10-2018 AMS64_00320 847d22838f3e0413d78eb66a2a5bf3b1 377 Gene3D G3DSA:1.10.287.470 103 162 1.8E-71 T 11-10-2018 AMS64_00320 847d22838f3e0413d78eb66a2a5bf3b1 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 362 1.3E-74 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_00320 847d22838f3e0413d78eb66a2a5bf3b1 377 Pfam PF00529 HlyD membrane-fusion protein of T1SS 270 347 7.2E-7 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_00320 847d22838f3e0413d78eb66a2a5bf3b1 377 Gene3D G3DSA:2.40.420.20 280 360 1.8E-71 T 11-10-2018 AMS64_00320 847d22838f3e0413d78eb66a2a5bf3b1 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 269 8.4E-31 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMS64_00320 847d22838f3e0413d78eb66a2a5bf3b1 377 SUPERFAMILY SSF111369 57 273 1.96E-39 T 11-10-2018 AMS64_19345 a4594ce977bfeba029dd9cc39b37534a 273 PIRSF PIRSF000903 1 273 2.0E-116 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AMS64_19345 a4594ce977bfeba029dd9cc39b37534a 273 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 268 5.3E-112 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AMS64_19345 a4594ce977bfeba029dd9cc39b37534a 273 Pfam PF00149 Calcineurin-like phosphoesterase 5 133 1.5E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMS64_19345 a4594ce977bfeba029dd9cc39b37534a 273 Gene3D G3DSA:3.60.21.10 1 271 2.3E-75 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMS64_19345 a4594ce977bfeba029dd9cc39b37534a 273 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 47.57 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AMS64_19345 a4594ce977bfeba029dd9cc39b37534a 273 SUPERFAMILY SSF56300 2 258 7.27E-61 T 11-10-2018 AMS64_18535 8d90e19ca3b54b0426207e39de175132 307 Pfam PF04055 Radical SAM superfamily 14 167 1.4E-9 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_18535 8d90e19ca3b54b0426207e39de175132 307 Pfam PF13353 4Fe-4S single cluster domain 12 118 3.6E-5 T 11-10-2018 AMS64_18535 8d90e19ca3b54b0426207e39de175132 307 Gene3D G3DSA:3.20.20.70 8 262 2.4E-30 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_18535 8d90e19ca3b54b0426207e39de175132 307 SUPERFAMILY SSF102114 8 209 1.14E-29 T 11-10-2018 AMS64_10365 4053dd838e263ed10bd29a71ed5fe5b1 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 11-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 AMS64_10365 4053dd838e263ed10bd29a71ed5fe5b1 567 Pfam PF00374 Nickel-dependent hydrogenase 39 552 1.7E-208 T 11-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 AMS64_10365 4053dd838e263ed10bd29a71ed5fe5b1 567 Gene3D G3DSA:1.10.645.10 1 552 3.0E-216 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10365 4053dd838e263ed10bd29a71ed5fe5b1 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 11-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 AMS64_10365 4053dd838e263ed10bd29a71ed5fe5b1 567 SUPERFAMILY SSF56762 1 552 9.03E-168 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_21655 fac9994fd76384173b967b8bdd2c4192 121 Pfam PF07226 Protein of unknown function (DUF1422) 6 112 4.7E-41 T 11-10-2018 IPR009867 Protein of unknown function DUF1422 AMS64_21655 fac9994fd76384173b967b8bdd2c4192 121 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 3 94 5.0E-22 T 11-10-2018 IPR009867 Protein of unknown function DUF1422 AMS64_07165 6b29f07148887125579854fbf1c107e4 205 Pfam PF02613 Nitrate reductase delta subunit 63 165 7.1E-27 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone AMS64_07165 6b29f07148887125579854fbf1c107e4 205 SUPERFAMILY SSF89155 13 193 2.22E-44 T 11-10-2018 IPR036411 TorD-like superfamily AMS64_07165 6b29f07148887125579854fbf1c107e4 205 Gene3D G3DSA:1.10.3480.10 11 198 7.4E-35 T 11-10-2018 AMS64_09025 7b87814527f30b9a9ceb30b49315c2f3 772 Gene3D G3DSA:3.30.365.10 453 610 2.9E-111 T 11-10-2018 AMS64_09025 7b87814527f30b9a9ceb30b49315c2f3 772 Gene3D G3DSA:3.30.365.10 15 282 6.5E-103 T 11-10-2018 AMS64_09025 7b87814527f30b9a9ceb30b49315c2f3 772 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 17 133 3.4E-29 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMS64_09025 7b87814527f30b9a9ceb30b49315c2f3 772 Gene3D G3DSA:3.30.365.10 134 358 6.5E-103 T 11-10-2018 AMS64_09025 7b87814527f30b9a9ceb30b49315c2f3 772 SMART SM01008 17 133 8.1E-42 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMS64_09025 7b87814527f30b9a9ceb30b49315c2f3 772 SUPERFAMILY SSF56003 125 753 1.1E-175 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMS64_09025 7b87814527f30b9a9ceb30b49315c2f3 772 SUPERFAMILY SSF54665 2 152 3.01E-39 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMS64_09025 7b87814527f30b9a9ceb30b49315c2f3 772 Gene3D G3DSA:3.30.365.10 369 750 2.9E-111 T 11-10-2018 AMS64_09025 7b87814527f30b9a9ceb30b49315c2f3 772 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 154 696 6.2E-155 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMS64_09025 7b87814527f30b9a9ceb30b49315c2f3 772 Gene3D G3DSA:3.90.1170.50 32 133 6.5E-103 T 11-10-2018 AMS64_10140 0ef03fadb94bdb8e9baace2bdd410b51 266 Gene3D G3DSA:3.90.1580.10 36 264 5.6E-58 T 11-10-2018 AMS64_10140 0ef03fadb94bdb8e9baace2bdd410b51 266 SUPERFAMILY SSF56436 41 264 1.65E-57 T 11-10-2018 IPR016187 C-type lectin fold AMS64_10140 0ef03fadb94bdb8e9baace2bdd410b51 266 Pfam PF03781 Sulfatase-modifying factor enzyme 1 42 263 1.6E-45 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AMS64_09150 b6147d721c97f1ea9f75bed2f5f4ef2f 214 SMART SM00849 13 193 1.3E-35 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_09150 b6147d721c97f1ea9f75bed2f5f4ef2f 214 Gene3D G3DSA:3.60.15.10 2 211 7.6E-78 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_09150 b6147d721c97f1ea9f75bed2f5f4ef2f 214 Pfam PF00753 Metallo-beta-lactamase superfamily 11 193 3.3E-28 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_09150 b6147d721c97f1ea9f75bed2f5f4ef2f 214 SUPERFAMILY SSF56281 3 209 1.22E-56 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_20115 3f7e3f86b96f1504dab6cf315e34b213 257 Gene3D G3DSA:3.20.20.140 1 255 8.4E-80 T 11-10-2018 AMS64_20115 3f7e3f86b96f1504dab6cf315e34b213 257 PIRSF PIRSF005902 1 257 2.8E-65 T 11-10-2018 IPR001130 TatD family GO:0016788 AMS64_20115 3f7e3f86b96f1504dab6cf315e34b213 257 Pfam PF01026 TatD related DNase 4 254 2.8E-62 T 11-10-2018 IPR001130 TatD family GO:0016788 AMS64_20115 3f7e3f86b96f1504dab6cf315e34b213 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMS64_20115 3f7e3f86b96f1504dab6cf315e34b213 257 SUPERFAMILY SSF51556 3 254 2.95E-74 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_13565 1420100926c504fa38fdd612a8d3d2f5 363 SUPERFAMILY SSF55031 179 259 5.38E-15 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMS64_13565 1420100926c504fa38fdd612a8d3d2f5 363 SUPERFAMILY SSF53187 4 354 9.61E-47 T 11-10-2018 AMS64_13565 1420100926c504fa38fdd612a8d3d2f5 363 Gene3D G3DSA:3.40.630.10 215 358 2.3E-16 T 11-10-2018 AMS64_13565 1420100926c504fa38fdd612a8d3d2f5 363 Gene3D G3DSA:3.40.630.10 2 194 1.7E-55 T 11-10-2018 AMS64_13565 1420100926c504fa38fdd612a8d3d2f5 363 Pfam PF01546 Peptidase family M20/M25/M40 100 350 4.3E-20 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMS64_13565 1420100926c504fa38fdd612a8d3d2f5 363 PIRSF PIRSF005962 1 183 9.3E-51 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 AMS64_13565 1420100926c504fa38fdd612a8d3d2f5 363 PIRSF PIRSF005962 178 359 5.6E-36 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 AMS64_19720 c4eb019936bcac5f87d90c1af829443e 540 SUPERFAMILY SSF161098 11 265 3.6E-37 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_19720 c4eb019936bcac5f87d90c1af829443e 540 SUPERFAMILY SSF161098 298 528 1.42E-30 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_19720 c4eb019936bcac5f87d90c1af829443e 540 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 10 527 4.8E-159 T 11-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 AMS64_19720 c4eb019936bcac5f87d90c1af829443e 540 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 258 3.7E-6 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_19720 c4eb019936bcac5f87d90c1af829443e 540 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 378 528 1.2E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_19720 c4eb019936bcac5f87d90c1af829443e 540 Gene3D G3DSA:1.10.3720.10 289 536 4.6E-27 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_19720 c4eb019936bcac5f87d90c1af829443e 540 Gene3D G3DSA:1.10.3720.10 15 269 2.5E-38 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_07470 60229a786f8ea75c807b96a532467aac 422 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 113 2.5E-25 T 11-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI AMS64_07470 60229a786f8ea75c807b96a532467aac 422 Gene3D G3DSA:1.25.40.10 150 288 6.5E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_07470 60229a786f8ea75c807b96a532467aac 422 SUPERFAMILY SSF48452 152 258 1.27E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_07470 60229a786f8ea75c807b96a532467aac 422 Pfam PF14559 Tetratricopeptide repeat 174 238 1.7E-7 T 11-10-2018 AMS64_17160 8ccfd4f83d946d6fb7ec9b2ce59a353a 310 Pfam PF00990 Diguanylate cyclase, GGDEF domain 154 304 9.1E-41 T 11-10-2018 IPR000160 GGDEF domain AMS64_17160 8ccfd4f83d946d6fb7ec9b2ce59a353a 310 Gene3D G3DSA:3.30.450.20 37 142 8.2E-8 T 11-10-2018 AMS64_17160 8ccfd4f83d946d6fb7ec9b2ce59a353a 310 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 150 308 3.8E-41 T 11-10-2018 IPR000160 GGDEF domain AMS64_17160 8ccfd4f83d946d6fb7ec9b2ce59a353a 310 SUPERFAMILY SSF55785 39 140 1.1E-8 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_17160 8ccfd4f83d946d6fb7ec9b2ce59a353a 310 SMART SM00267 141 308 5.5E-56 T 11-10-2018 IPR000160 GGDEF domain AMS64_17160 8ccfd4f83d946d6fb7ec9b2ce59a353a 310 SUPERFAMILY SSF55073 157 307 1.26E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_17160 8ccfd4f83d946d6fb7ec9b2ce59a353a 310 Gene3D G3DSA:3.30.70.270 145 310 2.7E-51 T 11-10-2018 AMS64_06280 f14fc8eb56c84945e0b2f6b6a286e043 393 SUPERFAMILY SSF46955 1 101 8.42E-22 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMS64_06280 f14fc8eb56c84945e0b2f6b6a286e043 393 Gene3D G3DSA:1.10.1660.10 1 109 3.3E-22 T 11-10-2018 AMS64_06280 f14fc8eb56c84945e0b2f6b6a286e043 393 Gene3D G3DSA:3.40.50.150 145 392 2.5E-40 T 11-10-2018 AMS64_06280 f14fc8eb56c84945e0b2f6b6a286e043 393 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.7E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_06280 f14fc8eb56c84945e0b2f6b6a286e043 393 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 2.7E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_06280 f14fc8eb56c84945e0b2f6b6a286e043 393 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.7E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_06280 f14fc8eb56c84945e0b2f6b6a286e043 393 Pfam PF13411 MerR HTH family regulatory protein 1 61 2.7E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_06280 f14fc8eb56c84945e0b2f6b6a286e043 393 Pfam PF13649 Methyltransferase domain 191 268 9.6E-12 T 11-10-2018 AMS64_06280 f14fc8eb56c84945e0b2f6b6a286e043 393 SMART SM00422 1 69 1.3E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_06280 f14fc8eb56c84945e0b2f6b6a286e043 393 SUPERFAMILY SSF53335 138 359 2.89E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_00705 b8f94d273626b0db8d247f6ce89659a8 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 102 128 8.2E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMS64_00705 b8f94d273626b0db8d247f6ce89659a8 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 153 181 8.2E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMS64_00705 b8f94d273626b0db8d247f6ce89659a8 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 84 102 8.2E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMS64_00705 b8f94d273626b0db8d247f6ce89659a8 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 8.2E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMS64_00705 b8f94d273626b0db8d247f6ce89659a8 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 224 1.5E-76 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMS64_00705 b8f94d273626b0db8d247f6ce89659a8 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 238 16.143 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMS64_00705 b8f94d273626b0db8d247f6ce89659a8 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 220 2.2E-65 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMS64_00705 b8f94d273626b0db8d247f6ce89659a8 251 ProSitePatterns PS01218 TatC family signature. 153 172 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site AMS64_03960 5eea483b4b9c7417aa379e6c8fa8cf80 173 Gene3D G3DSA:1.20.120.330 1 169 4.8E-59 T 11-10-2018 AMS64_03960 5eea483b4b9c7417aa379e6c8fa8cf80 173 Pfam PF05068 Mannitol repressor 5 167 2.6E-60 T 11-10-2018 IPR007761 Mannitol repressor MtlR-like AMS64_03960 5eea483b4b9c7417aa379e6c8fa8cf80 173 SUPERFAMILY SSF158668 1 167 9.68E-57 T 11-10-2018 IPR038026 MtlR-like superfamily AMS64_21980 47b017745f1bd947aff8fbd7a4152009 433 PIRSF PIRSF006054 5 430 2.0E-157 T 11-10-2018 IPR021144 Uncharacterised protein family UPF0597 AMS64_21980 47b017745f1bd947aff8fbd7a4152009 433 Pfam PF03313 Serine dehydratase alpha chain 91 423 9.5E-53 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AMS64_21980 47b017745f1bd947aff8fbd7a4152009 433 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 9 428 36.305 T 11-10-2018 IPR021144 Uncharacterised protein family UPF0597 AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 3.0E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 3.0E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 3.0E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 3.0E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 SUPERFAMILY SSF55252 82 145 1.57E-20 T 11-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 145 2.8E-24 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 Gene3D G3DSA:1.10.10.10 1 74 5.8E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 1.0E-21 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 Gene3D G3DSA:3.30.1360.40 75 155 2.6E-32 T 11-10-2018 AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 60.552 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 150 6.1E-45 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 SUPERFAMILY SSF46785 3 77 4.08E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_20335 218036fa3930161b4afbbd7786b144ce 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 73 1.3E-21 T 11-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AMS64_02010 35c06f8dbb7462a78ef798609b8e253e 122 SUPERFAMILY SSF50193 1 122 1.2E-52 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AMS64_02010 35c06f8dbb7462a78ef798609b8e253e 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.3E-56 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMS64_02010 35c06f8dbb7462a78ef798609b8e253e 122 Gene3D G3DSA:2.40.150.20 1 122 3.2E-56 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AMS64_02010 35c06f8dbb7462a78ef798609b8e253e 122 SMART SM01374 1 122 3.7E-87 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMS64_02010 35c06f8dbb7462a78ef798609b8e253e 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02010 35c06f8dbb7462a78ef798609b8e253e 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.3E-59 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMS64_02010 35c06f8dbb7462a78ef798609b8e253e 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.363 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMS64_08600 1d50babfd073c201af7f56b1fc45dfb5 665 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 265 661 1.1E-154 T 11-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AMS64_08600 1d50babfd073c201af7f56b1fc45dfb5 665 SUPERFAMILY SSF54373 477 551 8.5E-6 T 11-10-2018 AMS64_08600 1d50babfd073c201af7f56b1fc45dfb5 665 Gene3D G3DSA:3.50.50.60 264 658 3.1E-141 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_08600 1d50babfd073c201af7f56b1fc45dfb5 665 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 656 28.991 T 11-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AMS64_08600 1d50babfd073c201af7f56b1fc45dfb5 665 SUPERFAMILY SSF51905 265 658 9.71E-38 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_08600 1d50babfd073c201af7f56b1fc45dfb5 665 Gene3D G3DSA:3.40.50.150 9 251 4.0E-105 T 11-10-2018 AMS64_08600 1d50babfd073c201af7f56b1fc45dfb5 665 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 117 241 1.8E-45 T 11-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 AMS64_08600 1d50babfd073c201af7f56b1fc45dfb5 665 Gene3D G3DSA:3.30.9.10 348 569 3.1E-141 T 11-10-2018 AMS64_08600 1d50babfd073c201af7f56b1fc45dfb5 665 Pfam PF01266 FAD dependent oxidoreductase 265 631 9.6E-52 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMS64_06715 586c643186430eca5ff8e2feb0c6cdb7 241 SUPERFAMILY SSF53167 3 239 1.26E-62 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMS64_06715 586c643186430eca5ff8e2feb0c6cdb7 241 Gene3D G3DSA:3.40.50.1580 2 241 7.2E-72 T 11-10-2018 AMS64_06715 586c643186430eca5ff8e2feb0c6cdb7 241 Pfam PF01048 Phosphorylase superfamily 17 214 1.4E-33 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMS64_08540 e465d04b7ad477a2050006632babf8b9 174 Pfam PF13302 Acetyltransferase (GNAT) domain 9 146 8.1E-7 T 11-10-2018 IPR000182 GNAT domain AMS64_08540 e465d04b7ad477a2050006632babf8b9 174 Gene3D G3DSA:3.40.630.30 6 168 4.1E-16 T 11-10-2018 AMS64_08540 e465d04b7ad477a2050006632babf8b9 174 SUPERFAMILY SSF55729 7 157 8.83E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_17725 bd76af92a7959b92bea23633aee6477a 650 Gene3D G3DSA:3.30.70.1450 579 649 2.6E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_17725 bd76af92a7959b92bea23633aee6477a 650 Pfam PF02254 TrkA-N domain 405 518 5.7E-20 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMS64_17725 bd76af92a7959b92bea23633aee6477a 650 Gene3D G3DSA:3.40.50.720 400 561 3.0E-32 T 11-10-2018 AMS64_17725 bd76af92a7959b92bea23633aee6477a 650 SUPERFAMILY SSF116726 582 645 6.8E-8 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_17725 bd76af92a7959b92bea23633aee6477a 650 Gene3D G3DSA:1.20.1530.20 1 382 1.7E-87 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMS64_17725 bd76af92a7959b92bea23633aee6477a 650 SUPERFAMILY SSF51735 402 540 7.89E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_17725 bd76af92a7959b92bea23633aee6477a 650 Pfam PF00999 Sodium/hydrogen exchanger family 7 372 1.4E-68 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMS64_17725 bd76af92a7959b92bea23633aee6477a 650 Pfam PF02080 TrkA-C domain 589 645 1.3E-7 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMS64_16515 f22951ed9a28e0a54e916085b98d0282 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 2.3E-175 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMS64_16515 f22951ed9a28e0a54e916085b98d0282 554 Gene3D G3DSA:3.40.50.300 1 263 1.6E-49 T 11-10-2018 AMS64_16515 f22951ed9a28e0a54e916085b98d0282 554 Gene3D G3DSA:3.40.50.300 264 554 6.6E-55 T 11-10-2018 AMS64_16515 f22951ed9a28e0a54e916085b98d0282 554 PIRSF PIRSF003128 1 554 1.0E-159 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMS64_16515 f22951ed9a28e0a54e916085b98d0282 554 SUPERFAMILY SSF52540 1 217 3.84E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_16515 f22951ed9a28e0a54e916085b98d0282 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 513 1.1E-18 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMS64_16515 f22951ed9a28e0a54e916085b98d0282 554 SUPERFAMILY SSF52540 3 507 5.42E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_02450 8c664c0e6efe6790191180ff223fc6ea 153 SUPERFAMILY SSF53955 7 150 7.31E-44 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_02450 8c664c0e6efe6790191180ff223fc6ea 153 Gene3D G3DSA:1.10.530.10 4 153 2.2E-55 T 11-10-2018 AMS64_02450 8c664c0e6efe6790191180ff223fc6ea 153 Pfam PF00959 Phage lysozyme 41 139 5.5E-11 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AMS64_02450 8c664c0e6efe6790191180ff223fc6ea 153 Hamap MF_04109 Endolysin. 1 153 38.037 T 11-10-2018 IPR034691 Endolysin lambda type GO:0003796|GO:0009253|GO:0019076|GO:0044659 AMS64_15470 71e90f10b13544bac91fac021cc683ed 232 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 15 81 1.5E-11 T 11-10-2018 IPR006522 Phage virion morphogensis protein AMS64_15470 71e90f10b13544bac91fac021cc683ed 232 Pfam PF05069 Phage virion morphogenesis family 12 69 6.3E-10 T 11-10-2018 IPR006522 Phage virion morphogensis protein AMS64_22170 71e90f10b13544bac91fac021cc683ed 232 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 15 81 1.5E-11 T 11-10-2018 IPR006522 Phage virion morphogensis protein AMS64_22170 71e90f10b13544bac91fac021cc683ed 232 Pfam PF05069 Phage virion morphogenesis family 12 69 6.3E-10 T 11-10-2018 IPR006522 Phage virion morphogensis protein AMS64_16715 fec09534c2a0e19483bf69fff9e1ee8f 397 Gene3D G3DSA:2.40.50.100 65 209 1.7E-112 T 11-10-2018 AMS64_16715 fec09534c2a0e19483bf69fff9e1ee8f 397 Gene3D G3DSA:2.40.420.20 306 375 1.7E-112 T 11-10-2018 AMS64_16715 fec09534c2a0e19483bf69fff9e1ee8f 397 Pfam PF13533 Biotin-lipoyl like 66 114 1.1E-12 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMS64_16715 fec09534c2a0e19483bf69fff9e1ee8f 397 Gene3D G3DSA:2.40.30.170 53 305 1.7E-112 T 11-10-2018 AMS64_16715 fec09534c2a0e19483bf69fff9e1ee8f 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 377 1.5E-85 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_16715 fec09534c2a0e19483bf69fff9e1ee8f 397 Gene3D G3DSA:1.10.287.470 100 173 1.7E-112 T 11-10-2018 AMS64_16715 fec09534c2a0e19483bf69fff9e1ee8f 397 SUPERFAMILY SSF111369 53 302 2.22E-85 T 11-10-2018 AMS64_16715 fec09534c2a0e19483bf69fff9e1ee8f 397 Pfam PF13437 HlyD family secretion protein 177 292 1.1E-6 T 11-10-2018 AMS64_09450 52558a4bfc4117ea593c852dda76e58d 315 Gene3D G3DSA:3.40.50.12370 1 313 2.1E-112 T 11-10-2018 AMS64_09450 52558a4bfc4117ea593c852dda76e58d 315 Pfam PF00582 Universal stress protein family 4 147 6.3E-20 T 11-10-2018 IPR006016 UspA AMS64_09450 52558a4bfc4117ea593c852dda76e58d 315 Pfam PF00582 Universal stress protein family 179 300 2.6E-12 T 11-10-2018 IPR006016 UspA AMS64_09450 52558a4bfc4117ea593c852dda76e58d 315 SUPERFAMILY SSF52402 4 157 5.94E-31 T 11-10-2018 AMS64_09450 52558a4bfc4117ea593c852dda76e58d 315 SUPERFAMILY SSF52402 156 305 6.53E-24 T 11-10-2018 AMS64_16030 77a0ced471d0ebefb53b0ff8405ef4b9 193 Pfam PF02627 Carboxymuconolactone decarboxylase family 40 123 2.5E-12 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMS64_16030 77a0ced471d0ebefb53b0ff8405ef4b9 193 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 59 107 8.0E-8 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMS64_16030 77a0ced471d0ebefb53b0ff8405ef4b9 193 Gene3D G3DSA:1.20.1290.10 34 173 4.0E-35 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMS64_16030 77a0ced471d0ebefb53b0ff8405ef4b9 193 SUPERFAMILY SSF69118 1 176 4.32E-43 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMS64_19450 18d415aa856f3694b54cd16e544983d9 384 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 13 357 4.8E-143 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AMS64_19450 18d415aa856f3694b54cd16e544983d9 384 SUPERFAMILY SSF54862 197 295 4.18E-15 T 11-10-2018 AMS64_19450 18d415aa856f3694b54cd16e544983d9 384 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 6 324 49.838 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AMS64_19450 18d415aa856f3694b54cd16e544983d9 384 Pfam PF13484 4Fe-4S double cluster binding domain 201 265 4.0E-19 T 11-10-2018 AMS64_19450 18d415aa856f3694b54cd16e544983d9 384 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 202 213 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_19450 18d415aa856f3694b54cd16e544983d9 384 Pfam PF08331 Domain of unknown function (DUF1730) 61 148 2.2E-21 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AMS64_16200 5a471774ed1f1233eb0d8bdacf27f5e1 273 Pfam PF13460 NAD(P)H-binding 16 183 1.5E-7 T 11-10-2018 IPR016040 NAD(P)-binding domain AMS64_16200 5a471774ed1f1233eb0d8bdacf27f5e1 273 Gene3D G3DSA:3.40.50.720 6 272 5.4E-53 T 11-10-2018 AMS64_16200 5a471774ed1f1233eb0d8bdacf27f5e1 273 SUPERFAMILY SSF51735 13 259 1.58E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_14775 b39aba5c3614594926dc12a6d8e29d0b 266 Gene3D G3DSA:3.40.50.1820 1 265 5.9E-51 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_14775 b39aba5c3614594926dc12a6d8e29d0b 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 4.5E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_14775 b39aba5c3614594926dc12a6d8e29d0b 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 210 224 4.5E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_14775 b39aba5c3614594926dc12a6d8e29d0b 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 4.5E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_14775 b39aba5c3614594926dc12a6d8e29d0b 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 4.5E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_14775 b39aba5c3614594926dc12a6d8e29d0b 266 PRINTS PR00412 Epoxide hydrolase signature 46 61 3.1E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMS64_14775 b39aba5c3614594926dc12a6d8e29d0b 266 PRINTS PR00412 Epoxide hydrolase signature 105 118 3.1E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMS64_14775 b39aba5c3614594926dc12a6d8e29d0b 266 PRINTS PR00412 Epoxide hydrolase signature 240 262 3.1E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMS64_14775 b39aba5c3614594926dc12a6d8e29d0b 266 SUPERFAMILY SSF53474 3 264 9.61E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_14775 b39aba5c3614594926dc12a6d8e29d0b 266 Pfam PF00561 alpha/beta hydrolase fold 22 120 6.6E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_00885 d0ec6c9404b160a2ebe7fc846f32ff3b 314 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 1.7E-150 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00885 d0ec6c9404b160a2ebe7fc846f32ff3b 314 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 300 4.0E-176 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00885 d0ec6c9404b160a2ebe7fc846f32ff3b 314 Gene3D G3DSA:3.30.930.10 1 214 3.1E-111 T 11-10-2018 AMS64_00885 d0ec6c9404b160a2ebe7fc846f32ff3b 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.9E-71 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00885 d0ec6c9404b160a2ebe7fc846f32ff3b 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.9E-71 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00885 d0ec6c9404b160a2ebe7fc846f32ff3b 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.9E-71 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00885 d0ec6c9404b160a2ebe7fc846f32ff3b 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.9E-71 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00885 d0ec6c9404b160a2ebe7fc846f32ff3b 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.9E-71 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00885 d0ec6c9404b160a2ebe7fc846f32ff3b 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.9E-71 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00885 d0ec6c9404b160a2ebe7fc846f32ff3b 314 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.711 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00885 d0ec6c9404b160a2ebe7fc846f32ff3b 314 Gene3D G3DSA:1.20.58.180 215 297 7.5E-34 T 11-10-2018 AMS64_00885 d0ec6c9404b160a2ebe7fc846f32ff3b 314 SUPERFAMILY SSF55681 8 292 7.87E-134 T 11-10-2018 AMS64_21270 f37f3c67324a9e725db42e89e230cea8 90 Gene3D G3DSA:1.10.260.40 30 90 1.4E-9 T 11-10-2018 AMS64_21270 f37f3c67324a9e725db42e89e230cea8 90 SUPERFAMILY SSF47413 36 88 2.47E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_21270 f37f3c67324a9e725db42e89e230cea8 90 Pfam PF13560 Helix-turn-helix domain 33 86 8.6E-10 T 11-10-2018 AMS64_21270 f37f3c67324a9e725db42e89e230cea8 90 SMART SM00530 32 88 2.6E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_06915 b1cf2ebbea4aef9ea228cd96bbfbfcb0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 2.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06915 b1cf2ebbea4aef9ea228cd96bbfbfcb0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 2.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06915 b1cf2ebbea4aef9ea228cd96bbfbfcb0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 2.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06915 b1cf2ebbea4aef9ea228cd96bbfbfcb0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06915 b1cf2ebbea4aef9ea228cd96bbfbfcb0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06915 b1cf2ebbea4aef9ea228cd96bbfbfcb0 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 183 0.0041 T 11-10-2018 AMS64_06915 b1cf2ebbea4aef9ea228cd96bbfbfcb0 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 157 185 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_06915 b1cf2ebbea4aef9ea228cd96bbfbfcb0 251 Pfam PF00106 short chain dehydrogenase 14 213 1.7E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_06915 b1cf2ebbea4aef9ea228cd96bbfbfcb0 251 SUPERFAMILY SSF51735 11 247 2.1E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_06915 b1cf2ebbea4aef9ea228cd96bbfbfcb0 251 Gene3D G3DSA:3.40.50.720 2 250 8.6E-71 T 11-10-2018 AMS64_12800 b978206a29f5c894a6c97747e9ce778a 248 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 1.4E-109 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AMS64_12800 b978206a29f5c894a6c97747e9ce778a 248 Pfam PF13649 Methyltransferase domain 62 158 1.5E-14 T 11-10-2018 AMS64_12800 b978206a29f5c894a6c97747e9ce778a 248 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.052 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AMS64_12800 b978206a29f5c894a6c97747e9ce778a 248 Gene3D G3DSA:3.40.50.150 18 247 3.1E-63 T 11-10-2018 AMS64_12800 b978206a29f5c894a6c97747e9ce778a 248 SUPERFAMILY SSF53335 20 242 2.17E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_12800 b978206a29f5c894a6c97747e9ce778a 248 PIRSF PIRSF006325 1 243 3.4E-115 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AMS64_11690 b13d93e4c2408e4a4545237d21c7bc2e 296 Gene3D G3DSA:1.25.40.10 19 281 1.5E-90 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_11690 b13d93e4c2408e4a4545237d21c7bc2e 296 SUPERFAMILY SSF48452 23 276 8.95E-72 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_11690 b13d93e4c2408e4a4545237d21c7bc2e 296 PIRSF PIRSF004654 1 282 1.4E-108 T 11-10-2018 IPR023605 Lipoprotein NlpI AMS64_11690 b13d93e4c2408e4a4545237d21c7bc2e 296 Pfam PF00515 Tetratricopeptide repeat 91 124 1.0E-6 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 AMS64_11690 b13d93e4c2408e4a4545237d21c7bc2e 296 SMART SM00028 125 158 300.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_11690 b13d93e4c2408e4a4545237d21c7bc2e 296 SMART SM00028 57 90 4.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_11690 b13d93e4c2408e4a4545237d21c7bc2e 296 SMART SM00028 229 262 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_11690 b13d93e4c2408e4a4545237d21c7bc2e 296 SMART SM00028 91 124 3.8E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_02665 4323ca37b53a7de1455a6ff3d972ac38 336 Gene3D G3DSA:3.40.190.90 110 277 2.1E-129 T 11-10-2018 AMS64_02665 4323ca37b53a7de1455a6ff3d972ac38 336 SUPERFAMILY SSF56655 2 325 8.55E-111 T 11-10-2018 AMS64_02665 4323ca37b53a7de1455a6ff3d972ac38 336 PIRSF PIRSF004532 1 332 9.5E-140 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMS64_02665 4323ca37b53a7de1455a6ff3d972ac38 336 Gene3D G3DSA:3.30.540.10 7 320 2.1E-129 T 11-10-2018 AMS64_02665 4323ca37b53a7de1455a6ff3d972ac38 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 2.7E-172 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMS64_02665 4323ca37b53a7de1455a6ff3d972ac38 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 3.2E-133 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMS64_00600 21e6c8209bd58e78d1122e905d59b93d 610 Gene3D G3DSA:3.40.50.10490 249 609 3.4E-147 T 11-10-2018 AMS64_00600 21e6c8209bd58e78d1122e905d59b93d 610 Gene3D G3DSA:3.40.50.10490 448 595 3.4E-147 T 11-10-2018 AMS64_00600 21e6c8209bd58e78d1122e905d59b93d 610 Pfam PF01380 SIS domain 463 592 3.4E-25 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMS64_00600 21e6c8209bd58e78d1122e905d59b93d 610 Pfam PF01380 SIS domain 292 418 2.9E-34 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMS64_00600 21e6c8209bd58e78d1122e905d59b93d 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 3.5E-262 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AMS64_00600 21e6c8209bd58e78d1122e905d59b93d 610 Pfam PF13522 Glutamine amidotransferase domain 63 182 1.2E-23 T 11-10-2018 AMS64_00600 21e6c8209bd58e78d1122e905d59b93d 610 SUPERFAMILY SSF53697 245 610 6.06E-112 T 11-10-2018 AMS64_00600 21e6c8209bd58e78d1122e905d59b93d 610 SUPERFAMILY SSF56235 2 232 3.43E-76 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_00600 21e6c8209bd58e78d1122e905d59b93d 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.811 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AMS64_00600 21e6c8209bd58e78d1122e905d59b93d 610 Gene3D G3DSA:3.60.20.10 2 241 1.2E-82 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_15190 a075b30808e92b926f2ff213b459a32b 203 Gene3D G3DSA:1.20.58.320 2 88 1.1E-19 T 11-10-2018 AMS64_15190 a075b30808e92b926f2ff213b459a32b 203 Pfam PF06041 Bacterial protein of unknown function (DUF924) 8 200 1.1E-60 T 11-10-2018 IPR010323 Protein of unknown function DUF924 AMS64_15190 a075b30808e92b926f2ff213b459a32b 203 SUPERFAMILY SSF48452 2 199 3.79E-60 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_15190 a075b30808e92b926f2ff213b459a32b 203 Gene3D G3DSA:1.25.40.10 89 203 1.6E-34 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_17550 c2ac7aee1984e1d1fe43c2d7bb69fe95 505 SUPERFAMILY SSF53720 13 495 1.26E-158 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMS64_17550 c2ac7aee1984e1d1fe43c2d7bb69fe95 505 Gene3D G3DSA:3.40.605.10 35 490 4.3E-161 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMS64_17550 c2ac7aee1984e1d1fe43c2d7bb69fe95 505 Pfam PF00171 Aldehyde dehydrogenase family 27 492 9.0E-161 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMS64_17550 c2ac7aee1984e1d1fe43c2d7bb69fe95 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMS64_17550 c2ac7aee1984e1d1fe43c2d7bb69fe95 505 Gene3D G3DSA:3.40.309.10 265 462 4.3E-161 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMS64_17550 c2ac7aee1984e1d1fe43c2d7bb69fe95 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMS64_08430 095eec08533d8bb2cf137591abce3db0 545 Pfam PF11398 Protein of unknown function (DUF2813) 1 371 6.8E-139 T 11-10-2018 IPR022602 Protein of unknown function DUF2813 AMS64_08430 095eec08533d8bb2cf137591abce3db0 545 SUPERFAMILY SSF52540 1 328 1.24E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08430 095eec08533d8bb2cf137591abce3db0 545 Gene3D G3DSA:3.40.50.300 1 328 7.0E-11 T 11-10-2018 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 PIRSF PIRSF006060 299 396 2.5 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 PIRSF PIRSF006060 2 59 0.3 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 PIRSF PIRSF006060 63 297 3.8E-7 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 Gene3D G3DSA:1.20.1740.10 2 395 1.2E-13 T 11-10-2018 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 PRINTS PR00166 Aromatic amino acid permease signature 81 101 2.6E-74 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 PRINTS PR00166 Aromatic amino acid permease signature 311 329 2.6E-74 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 PRINTS PR00166 Aromatic amino acid permease signature 180 202 2.6E-74 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 PRINTS PR00166 Aromatic amino acid permease signature 277 296 2.6E-74 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 PRINTS PR00166 Aromatic amino acid permease signature 37 56 2.6E-74 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 PRINTS PR00166 Aromatic amino acid permease signature 146 166 2.6E-74 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 PRINTS PR00166 Aromatic amino acid permease signature 10 33 2.6E-74 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 PRINTS PR00166 Aromatic amino acid permease signature 219 238 2.6E-74 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 PRINTS PR00166 Aromatic amino acid permease signature 332 351 2.6E-74 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 Pfam PF03222 Tryptophan/tyrosine permease family 2 385 4.0E-104 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AMS64_09880 cffe1b3ffde8a8ca811297a939bd2b58 397 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 375 6.0E-106 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_15020 7f73b76f1c2f84bc5744f3ff2f4acf35 230 SUPERFAMILY SSF53167 1 228 2.75E-68 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMS64_15020 7f73b76f1c2f84bc5744f3ff2f4acf35 230 Gene3D G3DSA:3.40.50.1580 1 230 5.1E-67 T 11-10-2018 AMS64_15020 7f73b76f1c2f84bc5744f3ff2f4acf35 230 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 46.013 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMS64_15020 7f73b76f1c2f84bc5744f3ff2f4acf35 230 Pfam PF01048 Phosphorylase superfamily 2 227 1.6E-45 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMS64_15020 7f73b76f1c2f84bc5744f3ff2f4acf35 230 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 5.3E-93 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMS64_09550 81644202e5c67fc2ae6a0d0058217d87 41 SUPERFAMILY SSF57840 8 39 9.29E-12 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09550 81644202e5c67fc2ae6a0d0058217d87 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.072 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09550 81644202e5c67fc2ae6a0d0058217d87 41 Pfam PF00444 Ribosomal protein L36 1 39 4.0E-13 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_04000 c907170008ac5b4f26f26f63b5029a05 272 SUPERFAMILY SSF56300 14 266 1.32E-58 T 11-10-2018 AMS64_04000 c907170008ac5b4f26f26f63b5029a05 272 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 203 258 9.0E-14 T 11-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AMS64_04000 c907170008ac5b4f26f26f63b5029a05 272 Gene3D G3DSA:3.60.21.10 2 267 3.4E-70 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMS64_04000 c907170008ac5b4f26f26f63b5029a05 272 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 258 38.673 T 11-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AMS64_04000 c907170008ac5b4f26f26f63b5029a05 272 Pfam PF00149 Calcineurin-like phosphoesterase 14 203 2.3E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMS64_09300 5d719e852438b65f1502358434b396ee 351 SUPERFAMILY SSF102114 66 272 1.09E-9 T 11-10-2018 AMS64_09300 5d719e852438b65f1502358434b396ee 351 Gene3D G3DSA:3.80.30.30 108 254 1.0E-5 T 11-10-2018 AMS64_09300 5d719e852438b65f1502358434b396ee 351 Pfam PF04055 Radical SAM superfamily 67 245 1.1E-8 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_17125 2b2f9d6fd48fef6cd5381e89809e7131 1250 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1152 1208 4.8E-11 T 11-10-2018 AMS64_17125 2b2f9d6fd48fef6cd5381e89809e7131 1250 Pfam PF13476 AAA domain 5 225 1.7E-26 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain AMS64_17125 2b2f9d6fd48fef6cd5381e89809e7131 1250 SUPERFAMILY SSF52540 25 1231 7.2E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_17125 2b2f9d6fd48fef6cd5381e89809e7131 1250 Gene3D G3DSA:3.40.50.300 1 273 1.3E-35 T 11-10-2018 AMS64_17125 2b2f9d6fd48fef6cd5381e89809e7131 1250 Gene3D G3DSA:3.40.50.300 914 1249 4.4E-23 T 11-10-2018 AMS64_15910 5cb09a76ab9f3f5b2df7de406ac67398 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 11-10-2018 IPR019844 Cold-shock conserved site AMS64_15910 5cb09a76ab9f3f5b2df7de406ac67398 69 SMART SM00357 6 69 4.1E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMS64_15910 5cb09a76ab9f3f5b2df7de406ac67398 69 Gene3D G3DSA:2.40.50.140 4 68 9.6E-31 T 11-10-2018 AMS64_15910 5cb09a76ab9f3f5b2df7de406ac67398 69 SUPERFAMILY SSF50249 2 68 2.57E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_15910 5cb09a76ab9f3f5b2df7de406ac67398 69 PIRSF PIRSF002599 1 69 1.3E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMS64_15910 5cb09a76ab9f3f5b2df7de406ac67398 69 PRINTS PR00050 Cold shock protein signature 42 60 1.2E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_15910 5cb09a76ab9f3f5b2df7de406ac67398 69 PRINTS PR00050 Cold shock protein signature 27 36 1.2E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_15910 5cb09a76ab9f3f5b2df7de406ac67398 69 PRINTS PR00050 Cold shock protein signature 7 22 1.2E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_15910 5cb09a76ab9f3f5b2df7de406ac67398 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 5.3E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_01975 ee8434c09df0b2cc6a3991e23c9d66fc 273 SMART SM01382 124 251 4.0E-90 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMS64_01975 ee8434c09df0b2cc6a3991e23c9d66fc 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 1.0E-131 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMS64_01975 ee8434c09df0b2cc6a3991e23c9d66fc 273 SUPERFAMILY SSF50249 2 125 1.23E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_01975 ee8434c09df0b2cc6a3991e23c9d66fc 273 Gene3D G3DSA:2.40.50.140 1 114 9.3E-51 T 11-10-2018 AMS64_01975 ee8434c09df0b2cc6a3991e23c9d66fc 273 Gene3D G3DSA:4.10.950.10 196 273 2.5E-36 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01975 ee8434c09df0b2cc6a3991e23c9d66fc 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.0E-55 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMS64_01975 ee8434c09df0b2cc6a3991e23c9d66fc 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 9.8E-34 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01975 ee8434c09df0b2cc6a3991e23c9d66fc 273 SUPERFAMILY SSF50104 126 269 3.79E-59 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMS64_01975 ee8434c09df0b2cc6a3991e23c9d66fc 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.278 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMS64_01975 ee8434c09df0b2cc6a3991e23c9d66fc 273 Gene3D G3DSA:2.30.30.30 115 195 8.7E-33 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMS64_01975 ee8434c09df0b2cc6a3991e23c9d66fc 273 PIRSF PIRSF002158 12 273 7.9E-101 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01975 ee8434c09df0b2cc6a3991e23c9d66fc 273 SMART SM01383 42 118 4.5E-46 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_15035 39136652cde9932c2631b4c1dc48680b 334 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 327 2.5E-164 T 11-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 AMS64_15035 39136652cde9932c2631b4c1dc48680b 334 Gene3D G3DSA:3.90.25.30 167 315 1.3E-133 T 11-10-2018 AMS64_15035 39136652cde9932c2631b4c1dc48680b 334 Pfam PF02719 Polysaccharide biosynthesis protein 7 279 2.2E-102 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AMS64_15035 39136652cde9932c2631b4c1dc48680b 334 SUPERFAMILY SSF51735 1 264 4.48E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_15035 39136652cde9932c2631b4c1dc48680b 334 Gene3D G3DSA:3.40.50.720 5 311 1.3E-133 T 11-10-2018 AMS64_19790 f91cd27eb8caaf4c39fb1664756c8409 450 PIRSF PIRSF006603 2 445 3.8E-119 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_19790 f91cd27eb8caaf4c39fb1664756c8409 450 Pfam PF01554 MatE 247 407 2.7E-23 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_19790 f91cd27eb8caaf4c39fb1664756c8409 450 Pfam PF01554 MatE 22 181 1.7E-27 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_19790 f91cd27eb8caaf4c39fb1664756c8409 450 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 409 6.0E-58 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_12715 7c4be6a242a6f4ace35a5bd45b772d7a 243 SMART SM00062 22 243 6.9E-8 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_12715 7c4be6a242a6f4ace35a5bd45b772d7a 243 Gene3D G3DSA:3.40.190.10 107 201 7.8E-29 T 11-10-2018 AMS64_12715 7c4be6a242a6f4ace35a5bd45b772d7a 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 241 2.4E-26 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_12715 7c4be6a242a6f4ace35a5bd45b772d7a 243 Gene3D G3DSA:3.40.190.10 30 241 7.8E-29 T 11-10-2018 AMS64_12715 7c4be6a242a6f4ace35a5bd45b772d7a 243 SUPERFAMILY SSF53850 23 241 2.49E-38 T 11-10-2018 AMS64_20605 17661ed12228f0df8e597b0700f6c86f 986 Pfam PF14559 Tetratricopeptide repeat 48 108 3.0E-7 T 11-10-2018 AMS64_20605 17661ed12228f0df8e597b0700f6c86f 986 Gene3D G3DSA:1.25.40.10 38 114 5.6E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_20605 17661ed12228f0df8e597b0700f6c86f 986 SUPERFAMILY SSF48452 45 663 4.11E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_20605 17661ed12228f0df8e597b0700f6c86f 986 Pfam PF13283 Bacteriophage N adsorption protein A C-term 779 961 1.6E-37 T 11-10-2018 IPR025137 Bacteriophage N4 adsorption protein A, C-terminal AMS64_20605 17661ed12228f0df8e597b0700f6c86f 986 Gene3D G3DSA:1.25.40.10 486 642 3.6E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_07090 96cc059cfb86c8127d4e0fab6e6d2a66 184 Pfam PF11810 Domain of unknown function (DUF3332) 10 176 1.1E-41 T 11-10-2018 IPR021768 Protein of unknown function DUF3332 AMS64_12600 7abed394f954a785b0962536d76f6155 350 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 7 346 4.1E-133 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 AMS64_12600 7abed394f954a785b0962536d76f6155 350 Pfam PF03116 NQR2, RnfD, RnfE family 4 346 2.5E-101 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AMS64_12600 7abed394f954a785b0962536d76f6155 350 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 2 348 27.171 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 AMS64_17625 e472792b1f035830faa13683be5ac820 324 Gene3D G3DSA:3.40.50.2300 135 315 1.6E-15 T 11-10-2018 AMS64_17625 e472792b1f035830faa13683be5ac820 324 Pfam PF04392 ABC transporter substrate binding protein 40 315 9.1E-8 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein AMS64_17625 e472792b1f035830faa13683be5ac820 324 Gene3D G3DSA:3.40.50.2300 54 295 1.6E-15 T 11-10-2018 AMS64_20325 ade424dd66136625a4f7bf8331299628 245 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AMS64_20325 ade424dd66136625a4f7bf8331299628 245 Gene3D G3DSA:3.40.190.10 25 242 8.8E-76 T 11-10-2018 AMS64_20325 ade424dd66136625a4f7bf8331299628 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 244 3.7E-64 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_20325 ade424dd66136625a4f7bf8331299628 245 SMART SM00062 22 244 1.2E-75 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_20325 ade424dd66136625a4f7bf8331299628 245 Gene3D G3DSA:3.40.190.10 108 203 8.8E-76 T 11-10-2018 AMS64_20325 ade424dd66136625a4f7bf8331299628 245 SUPERFAMILY SSF53850 1 244 1.21E-65 T 11-10-2018 AMS64_09540 fb26083dcca2bbc027c827ae291f7f8a 178 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 177 39.21 T 11-10-2018 IPR009809 Cell division protein ZapC AMS64_09540 fb26083dcca2bbc027c827ae291f7f8a 178 PIRSF PIRSF010252 1 178 4.8E-66 T 11-10-2018 IPR009809 Cell division protein ZapC AMS64_09540 fb26083dcca2bbc027c827ae291f7f8a 178 Pfam PF07126 Cell-division protein ZapC 3 166 2.4E-64 T 11-10-2018 IPR009809 Cell division protein ZapC AMS64_00815 56779aca848a7a7ee3cac29bfbd9abd7 107 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.256 T 11-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 AMS64_00815 56779aca848a7a7ee3cac29bfbd9abd7 107 Pfam PF00581 Rhodanese-like domain 9 98 4.4E-15 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_00815 56779aca848a7a7ee3cac29bfbd9abd7 107 Gene3D G3DSA:3.40.250.10 1 105 2.2E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_00815 56779aca848a7a7ee3cac29bfbd9abd7 107 SMART SM00450 7 102 1.9E-22 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_00815 56779aca848a7a7ee3cac29bfbd9abd7 107 SUPERFAMILY SSF52821 1 99 8.38E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_04605 441636e6a185f2f5b6e293109ccca925 158 Gene3D G3DSA:3.30.70.920 57 142 3.9E-28 T 11-10-2018 AMS64_04605 441636e6a185f2f5b6e293109ccca925 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMS64_04605 441636e6a185f2f5b6e293109ccca925 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 5.3E-21 T 11-10-2018 AMS64_04605 441636e6a185f2f5b6e293109ccca925 158 Gene3D G3DSA:1.10.10.10 5 56 1.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_04605 441636e6a185f2f5b6e293109ccca925 158 SUPERFAMILY SSF54909 65 154 6.17E-23 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMS64_04605 441636e6a185f2f5b6e293109ccca925 158 SMART SM00344 4 114 3.6E-40 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMS64_04605 441636e6a185f2f5b6e293109ccca925 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 3.2E-18 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMS64_04605 441636e6a185f2f5b6e293109ccca925 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 3.2E-18 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMS64_04605 441636e6a185f2f5b6e293109ccca925 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 3.2E-18 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMS64_04605 441636e6a185f2f5b6e293109ccca925 158 Pfam PF01037 Lrp/AsnC ligand binding domain 70 144 1.5E-25 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMS64_04605 441636e6a185f2f5b6e293109ccca925 158 SUPERFAMILY SSF46785 2 92 8.67E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_15045 aa237985501d03d759c7529af13c3766 281 Gene3D G3DSA:3.20.20.100 1 258 1.5E-29 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMS64_15045 aa237985501d03d759c7529af13c3766 281 SUPERFAMILY SSF51430 2 263 1.83E-30 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMS64_15045 aa237985501d03d759c7529af13c3766 281 Pfam PF00248 Aldo/keto reductase family 3 250 1.6E-18 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMS64_00180 d141af263eab144fdf4f7ddb722c0788 247 Gene3D G3DSA:3.40.50.2300 1 127 1.6E-30 T 11-10-2018 AMS64_00180 d141af263eab144fdf4f7ddb722c0788 247 Pfam PF04397 LytTr DNA-binding domain 149 245 1.5E-30 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMS64_00180 d141af263eab144fdf4f7ddb722c0788 247 Gene3D G3DSA:2.40.50.40 140 208 9.7E-21 T 11-10-2018 AMS64_00180 d141af263eab144fdf4f7ddb722c0788 247 SMART SM00850 148 246 7.7E-37 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMS64_00180 d141af263eab144fdf4f7ddb722c0788 247 SUPERFAMILY SSF52172 1 118 7.4E-27 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_00180 d141af263eab144fdf4f7ddb722c0788 247 SMART SM00448 2 113 9.9E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_00180 d141af263eab144fdf4f7ddb722c0788 247 Pfam PF00072 Response regulator receiver domain 5 113 2.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_12470 4543dd2d08290e479713f03b60eb4315 335 Pfam PF12710 haloacid dehalogenase-like hydrolase 61 265 1.1E-18 T 11-10-2018 AMS64_12470 4543dd2d08290e479713f03b60eb4315 335 Gene3D G3DSA:3.40.50.1000 119 305 1.3E-35 T 11-10-2018 IPR023214 HAD superfamily AMS64_12470 4543dd2d08290e479713f03b60eb4315 335 SUPERFAMILY SSF56784 55 286 3.64E-17 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_14410 fe8ef93aade6ce4fa21facfdffd1264f 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 295 6.3E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_14410 fe8ef93aade6ce4fa21facfdffd1264f 301 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 68 136 5.9E-14 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMS64_14410 fe8ef93aade6ce4fa21facfdffd1264f 301 Gene3D G3DSA:1.10.3720.10 65 297 5.4E-47 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_14410 fe8ef93aade6ce4fa21facfdffd1264f 301 SUPERFAMILY SSF161098 69 284 3.01E-39 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_07095 e08bf576bc5d0da9ab9e2d80b23c9618 457 Gene3D G3DSA:1.10.3210.10 257 447 8.7E-60 T 11-10-2018 AMS64_07095 e08bf576bc5d0da9ab9e2d80b23c9618 457 SMART SM00471 275 410 6.6E-10 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_07095 e08bf576bc5d0da9ab9e2d80b23c9618 457 SUPERFAMILY SSF109604 270 437 5.32E-35 T 11-10-2018 AMS64_07095 e08bf576bc5d0da9ab9e2d80b23c9618 457 Pfam PF13487 HD domain 330 392 7.2E-19 T 11-10-2018 AMS64_07095 e08bf576bc5d0da9ab9e2d80b23c9618 457 Pfam PF13487 HD domain 131 184 1.1E-10 T 11-10-2018 AMS64_07095 e08bf576bc5d0da9ab9e2d80b23c9618 457 SUPERFAMILY SSF109604 14 227 1.0E-12 T 11-10-2018 AMS64_08045 78a21510ca7aa9f2450416c1566e8ddf 554 Pfam PF00501 AMP-binding enzyme 20 432 7.6E-87 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMS64_08045 78a21510ca7aa9f2450416c1566e8ddf 554 SUPERFAMILY SSF56801 12 540 1.83E-115 T 11-10-2018 AMS64_08045 78a21510ca7aa9f2450416c1566e8ddf 554 Gene3D G3DSA:3.30.300.30 428 543 3.2E-5 T 11-10-2018 AMS64_08045 78a21510ca7aa9f2450416c1566e8ddf 554 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMS64_08045 78a21510ca7aa9f2450416c1566e8ddf 554 Gene3D G3DSA:3.40.50.12780 9 427 1.2E-84 T 11-10-2018 AMS64_04510 fe1057f1e352283c46eda1d6d719eb4f 266 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 145 263 3.2E-41 T 11-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal AMS64_04510 fe1057f1e352283c46eda1d6d719eb4f 266 Pfam PF13432 Tetratricopeptide repeat 158 207 1.2E-6 T 11-10-2018 AMS64_04510 fe1057f1e352283c46eda1d6d719eb4f 266 Pfam PF16331 TolA binding protein trimerisation 51 125 4.8E-23 T 11-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 AMS64_04510 fe1057f1e352283c46eda1d6d719eb4f 266 Pfam PF13174 Tetratricopeptide repeat 221 253 7.9E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_04510 fe1057f1e352283c46eda1d6d719eb4f 266 Gene3D G3DSA:1.20.5.110 49 125 1.5E-23 T 11-10-2018 AMS64_04510 fe1057f1e352283c46eda1d6d719eb4f 266 SUPERFAMILY SSF48452 140 255 4.93E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_04510 fe1057f1e352283c46eda1d6d719eb4f 266 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 266 19.588 T 11-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 AMS64_04510 fe1057f1e352283c46eda1d6d719eb4f 266 Gene3D G3DSA:1.25.40.10 145 266 1.4E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_02645 eee112499e02b5ea19d852d25c928cb9 485 Gene3D G3DSA:1.20.1740.10 1 484 1.6E-22 T 11-10-2018 AMS64_02645 eee112499e02b5ea19d852d25c928cb9 485 Pfam PF13520 Amino acid permease 10 458 6.5E-26 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_02645 eee112499e02b5ea19d852d25c928cb9 485 PIRSF PIRSF006060 1 484 6.2E-39 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_20635 b8b4ac03ee2d8b134d0085664e24a807 315 SUPERFAMILY SSF53850 90 293 3.21E-40 T 11-10-2018 AMS64_20635 b8b4ac03ee2d8b134d0085664e24a807 315 SUPERFAMILY SSF46785 5 112 7.71E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_20635 b8b4ac03ee2d8b134d0085664e24a807 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_20635 b8b4ac03ee2d8b134d0085664e24a807 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_20635 b8b4ac03ee2d8b134d0085664e24a807 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_20635 b8b4ac03ee2d8b134d0085664e24a807 315 Gene3D G3DSA:3.40.190.10 91 301 2.8E-84 T 11-10-2018 AMS64_20635 b8b4ac03ee2d8b134d0085664e24a807 315 Pfam PF03466 LysR substrate binding domain 90 293 5.7E-40 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_20635 b8b4ac03ee2d8b134d0085664e24a807 315 Gene3D G3DSA:3.40.190.10 167 267 2.8E-84 T 11-10-2018 AMS64_20635 b8b4ac03ee2d8b134d0085664e24a807 315 Gene3D G3DSA:1.10.10.10 1 86 6.8E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_20635 b8b4ac03ee2d8b134d0085664e24a807 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 2.0E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_01565 e27d138daaaa3cc70ffe5a408dd88d66 231 Pfam PF12973 ChrR Cupin-like domain 137 206 3.1E-13 T 11-10-2018 IPR025979 ChrR-like cupin domain AMS64_01565 e27d138daaaa3cc70ffe5a408dd88d66 231 Gene3D G3DSA:1.10.10.1320 1 122 2.6E-12 T 11-10-2018 AMS64_01565 e27d138daaaa3cc70ffe5a408dd88d66 231 SUPERFAMILY SSF51182 119 208 6.32E-16 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_01565 e27d138daaaa3cc70ffe5a408dd88d66 231 Gene3D G3DSA:2.60.120.10 123 211 1.8E-21 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_01565 e27d138daaaa3cc70ffe5a408dd88d66 231 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 5 226 7.2E-54 T 11-10-2018 IPR012807 Anti-sigma factor ChrR, putative AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 6 917 3.7E-252 T 11-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 SMART SM00387 559 676 3.7E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 630 1.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 616 1.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 654 1.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 673 1.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 Pfam PF00072 Response regulator receiver domain 696 810 1.7E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 SUPERFAMILY SSF47226 828 933 2.88E-11 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 Gene3D G3DSA:1.20.58.920 50 318 1.1E-68 T 11-10-2018 IPR038188 TorS, sensor domain superfamily AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 SMART SM00448 694 810 2.8E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 675 1.1E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 SUPERFAMILY SSF47384 434 513 3.92E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 Pfam PF00672 HAMP domain 355 400 3.0E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 SUPERFAMILY SSF55874 501 675 1.05E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 Gene3D G3DSA:3.40.50.2300 691 826 2.7E-29 T 11-10-2018 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 Gene3D G3DSA:1.20.120.160 835 938 2.7E-9 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 SMART SM00388 447 512 1.2E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 Pfam PF00512 His Kinase A (phospho-acceptor) domain 448 512 7.2E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 SUPERFAMILY SSF52172 693 819 8.54E-31 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 PIRSF PIRSF036437 4 940 4.4E-242 T 11-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 Gene3D G3DSA:3.30.565.10 511 679 2.7E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 Pfam PF01627 Hpt domain 869 932 1.1E-5 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 SMART SM00304 350 404 9.6E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_18940 8078ff1abd39eb0974578acd01a44763 941 Gene3D G3DSA:1.10.287.130 410 510 1.8E-28 T 11-10-2018 AMS64_22450 77b90432ab2adaa4ae227100fe84a7cd 498 Pfam PF00171 Aldehyde dehydrogenase family 33 492 5.4E-172 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMS64_22450 77b90432ab2adaa4ae227100fe84a7cd 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMS64_22450 77b90432ab2adaa4ae227100fe84a7cd 498 Gene3D G3DSA:3.40.605.10 24 491 1.7E-176 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMS64_22450 77b90432ab2adaa4ae227100fe84a7cd 498 SUPERFAMILY SSF53720 10 496 5.63E-165 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMS64_22450 77b90432ab2adaa4ae227100fe84a7cd 498 Gene3D G3DSA:3.40.309.10 271 463 1.7E-176 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMS64_22450 77b90432ab2adaa4ae227100fe84a7cd 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMS64_00720 9eec0461bb0c2cbb49744adcdfba6858 1168 Pfam PF12561 ToxR activated gene A lipoprotein 869 964 8.0E-11 T 11-10-2018 IPR022218 ToxR activated gene A lipoprotein AMS64_00720 9eec0461bb0c2cbb49744adcdfba6858 1168 SMART SM00495 1113 1168 1.8E-7 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_00720 9eec0461bb0c2cbb49744adcdfba6858 1168 SUPERFAMILY SSF50969 194 362 4.55E-6 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMS64_02950 2332d0aa0c71129fc81e62549c716ade 192 Pfam PF04972 BON domain 46 114 1.6E-11 T 11-10-2018 IPR007055 BON domain AMS64_02950 2332d0aa0c71129fc81e62549c716ade 192 Pfam PF04972 BON domain 124 190 1.2E-16 T 11-10-2018 IPR007055 BON domain AMS64_02950 2332d0aa0c71129fc81e62549c716ade 192 SMART SM00749 129 192 7.1E-7 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AMS64_02950 2332d0aa0c71129fc81e62549c716ade 192 SMART SM00749 51 114 12.0 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AMS64_18165 5a55902f164632c20c222701e9b683b3 128 Pfam PF04241 Protein of unknown function (DUF423) 21 106 3.2E-26 T 11-10-2018 IPR006696 Protein of unknown function DUF423 AMS64_01690 af8fa4b55365432ea17b5a56fd2add1f 453 Gene3D G3DSA:3.40.640.10 66 341 5.3E-186 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_01690 af8fa4b55365432ea17b5a56fd2add1f 453 PIRSF PIRSF000521 12 446 1.9E-28 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_01690 af8fa4b55365432ea17b5a56fd2add1f 453 SUPERFAMILY SSF53383 14 444 1.05E-127 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_01690 af8fa4b55365432ea17b5a56fd2add1f 453 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_01690 af8fa4b55365432ea17b5a56fd2add1f 453 Gene3D G3DSA:3.90.1150.10 12 445 5.3E-186 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_01690 af8fa4b55365432ea17b5a56fd2add1f 453 Pfam PF00202 Aminotransferase class-III 32 439 6.7E-95 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_17900 0323de6c87229cef38955e44441edcb7 316 Gene3D G3DSA:3.30.1490.20 138 197 5.1E-29 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMS64_17900 0323de6c87229cef38955e44441edcb7 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 7.1E-46 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AMS64_17900 0323de6c87229cef38955e44441edcb7 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 176.437 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AMS64_17900 0323de6c87229cef38955e44441edcb7 316 SUPERFAMILY SSF56059 124 313 1.55E-58 T 11-10-2018 AMS64_17900 0323de6c87229cef38955e44441edcb7 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 312 1.9E-136 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AMS64_17900 0323de6c87229cef38955e44441edcb7 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 1.3E-78 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AMS64_17900 0323de6c87229cef38955e44441edcb7 316 Gene3D G3DSA:3.40.50.20 2 130 1.7E-49 T 11-10-2018 AMS64_17900 0323de6c87229cef38955e44441edcb7 316 Gene3D G3DSA:3.30.470.20 198 301 1.7E-39 T 11-10-2018 AMS64_17900 0323de6c87229cef38955e44441edcb7 316 SUPERFAMILY SSF52440 3 123 4.32E-45 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMS64_11995 39ab44d2a434138094b29da86aec856e 124 Gene3D G3DSA:1.10.260.40 3 85 1.3E-6 T 11-10-2018 AMS64_11995 39ab44d2a434138094b29da86aec856e 124 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 24 78 1.6E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_11995 39ab44d2a434138094b29da86aec856e 124 SMART SM00530 23 80 2.6E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_11995 39ab44d2a434138094b29da86aec856e 124 SUPERFAMILY SSF47413 22 83 2.11E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_09495 d17c105ff4f7579583ba158c81a27b1f 474 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 464 1.5E-228 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMS64_09495 d17c105ff4f7579583ba158c81a27b1f 474 SUPERFAMILY SSF81442 10 464 2.88E-121 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_09495 d17c105ff4f7579583ba158c81a27b1f 474 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_09495 d17c105ff4f7579583ba158c81a27b1f 474 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 14 443 6.2E-114 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_09495 d17c105ff4f7579583ba158c81a27b1f 474 Gene3D G3DSA:1.20.210.10 2 471 1.7E-204 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_09155 67d02ddf4a621e0ad8b2a6a4ad2ee1cc 371 SUPERFAMILY SSF52821 10 137 3.67E-19 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_09155 67d02ddf4a621e0ad8b2a6a4ad2ee1cc 371 SMART SM00450 4 134 2.7E-12 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_09155 67d02ddf4a621e0ad8b2a6a4ad2ee1cc 371 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 3 364 50.929 T 11-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 AMS64_09155 67d02ddf4a621e0ad8b2a6a4ad2ee1cc 371 Gene3D G3DSA:3.40.250.10 9 135 1.2E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_09155 67d02ddf4a621e0ad8b2a6a4ad2ee1cc 371 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 18 349 2.8E-101 T 11-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 AMS64_09155 67d02ddf4a621e0ad8b2a6a4ad2ee1cc 371 SUPERFAMILY SSF52540 133 252 4.03E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_12955 6aa19a9d74f16edc78c31e79542a7dc6 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 417 1.7E-59 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_12955 6aa19a9d74f16edc78c31e79542a7dc6 453 Pfam PF01554 MatE 243 403 2.2E-30 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_12955 6aa19a9d74f16edc78c31e79542a7dc6 453 Pfam PF01554 MatE 18 177 2.1E-24 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_12955 6aa19a9d74f16edc78c31e79542a7dc6 453 PIRSF PIRSF006603 9 453 2.8E-80 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_17780 eee70d65a349ada8cd4a98efbf9d714e 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.9E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_17780 eee70d65a349ada8cd4a98efbf9d714e 299 Gene3D G3DSA:3.40.190.290 91 292 2.2E-65 T 11-10-2018 AMS64_17780 eee70d65a349ada8cd4a98efbf9d714e 299 SUPERFAMILY SSF46785 4 111 7.71E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_17780 eee70d65a349ada8cd4a98efbf9d714e 299 Gene3D G3DSA:1.10.10.10 3 89 2.7E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_17780 eee70d65a349ada8cd4a98efbf9d714e 299 Pfam PF03466 LysR substrate binding domain 88 292 9.1E-46 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_17780 eee70d65a349ada8cd4a98efbf9d714e 299 SUPERFAMILY SSF53850 89 293 2.53E-45 T 11-10-2018 AMS64_07775 51370d4c04fbb21f9b698c41d7f48a73 147 SUPERFAMILY SSF69635 6 141 2.29E-31 T 11-10-2018 AMS64_07775 51370d4c04fbb21f9b698c41d7f48a73 147 Gene3D G3DSA:3.30.1460.10 1 131 2.6E-29 T 11-10-2018 AMS64_07775 51370d4c04fbb21f9b698c41d7f48a73 147 Pfam PF05932 Tir chaperone protein (CesT) family 9 126 9.8E-17 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AMS64_13780 51370d4c04fbb21f9b698c41d7f48a73 147 SUPERFAMILY SSF69635 6 141 2.29E-31 T 11-10-2018 AMS64_13780 51370d4c04fbb21f9b698c41d7f48a73 147 Gene3D G3DSA:3.30.1460.10 1 131 2.6E-29 T 11-10-2018 AMS64_13780 51370d4c04fbb21f9b698c41d7f48a73 147 Pfam PF05932 Tir chaperone protein (CesT) family 9 126 9.8E-17 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AMS64_01605 291b08f5238a97ed754f045e6d1bbad4 328 Gene3D G3DSA:3.40.50.2300 26 299 1.4E-115 T 11-10-2018 AMS64_01605 291b08f5238a97ed754f045e6d1bbad4 328 SUPERFAMILY SSF53822 23 327 8.34E-83 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_01605 291b08f5238a97ed754f045e6d1bbad4 328 Gene3D G3DSA:3.40.50.2300 132 277 1.4E-115 T 11-10-2018 AMS64_01605 291b08f5238a97ed754f045e6d1bbad4 328 Pfam PF13407 Periplasmic binding protein domain 26 297 9.5E-63 T 11-10-2018 IPR025997 Periplasmic binding protein AMS64_16290 d08b58e3448fbb83776157d7633bcaa9 218 Gene3D G3DSA:3.90.1490.10 123 215 2.6E-18 T 11-10-2018 AMS64_16290 d08b58e3448fbb83776157d7633bcaa9 218 SUPERFAMILY SSF52402 1 213 5.67E-54 T 11-10-2018 AMS64_16290 d08b58e3448fbb83776157d7633bcaa9 218 Gene3D G3DSA:3.40.50.620 1 122 5.3E-21 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_16290 d08b58e3448fbb83776157d7633bcaa9 218 Pfam PF01902 Diphthamide synthase 3 206 6.2E-28 T 11-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 AMS64_18260 429822414618fe7ecee68db0caede451 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 7.7E-60 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMS64_18260 429822414618fe7ecee68db0caede451 198 PIRSF PIRSF006102 1 198 8.0E-65 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMS64_18260 429822414618fe7ecee68db0caede451 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.362 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AMS64_18260 429822414618fe7ecee68db0caede451 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 196 4.1E-104 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AMS64_04460 01c1504a237a74425b314b58f8955b4e 336 Gene3D G3DSA:1.10.8.60 185 258 6.7E-31 T 11-10-2018 AMS64_04460 01c1504a237a74425b314b58f8955b4e 336 Gene3D G3DSA:1.10.10.10 260 336 2.5E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_04460 01c1504a237a74425b314b58f8955b4e 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 185.838 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMS64_04460 01c1504a237a74425b314b58f8955b4e 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 330 1.0E-35 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMS64_04460 01c1504a237a74425b314b58f8955b4e 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 5.6E-119 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AMS64_04460 01c1504a237a74425b314b58f8955b4e 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 329 1.9E-147 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMS64_04460 01c1504a237a74425b314b58f8955b4e 336 SUPERFAMILY SSF46785 260 333 6.8E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_04460 01c1504a237a74425b314b58f8955b4e 336 SMART SM00382 54 181 1.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_04460 01c1504a237a74425b314b58f8955b4e 336 SUPERFAMILY SSF52540 23 254 2.9E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_04460 01c1504a237a74425b314b58f8955b4e 336 Gene3D G3DSA:3.40.50.300 23 184 3.7E-40 T 11-10-2018 AMS64_04460 01c1504a237a74425b314b58f8955b4e 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 9.6E-33 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMS64_20845 d3d478e8ff3dec0dc142ee7361ffa0ad 249 Gene3D G3DSA:3.40.30.10 70 243 5.4E-44 T 11-10-2018 AMS64_20845 d3d478e8ff3dec0dc142ee7361ffa0ad 249 Pfam PF13462 Thioredoxin 80 240 6.1E-27 T 11-10-2018 IPR012336 Thioredoxin-like fold AMS64_20845 d3d478e8ff3dec0dc142ee7361ffa0ad 249 SUPERFAMILY SSF52833 74 229 5.47E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_09790 d3030013fa80b692602c7c67a5e06d69 333 Gene3D G3DSA:3.30.160.60 300 332 2.5E-13 T 11-10-2018 AMS64_09790 d3030013fa80b692602c7c67a5e06d69 333 Pfam PF02618 YceG-like family 43 326 1.3E-82 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AMS64_09790 d3030013fa80b692602c7c67a5e06d69 333 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 18 330 9.0E-93 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AMS64_09790 d3030013fa80b692602c7c67a5e06d69 333 Gene3D G3DSA:3.30.160.60 71 107 3.1E-7 T 11-10-2018 AMS64_09790 d3030013fa80b692602c7c67a5e06d69 333 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 3 332 32.501 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AMS64_07005 c845d533a3c9e106dbe6a99b53c11f7f 577 SUPERFAMILY SSF48208 86 565 5.44E-79 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMS64_07005 c845d533a3c9e106dbe6a99b53c11f7f 577 SUPERFAMILY SSF81296 2 96 2.59E-16 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_07005 c845d533a3c9e106dbe6a99b53c11f7f 577 Pfam PF02927 Cellulase N-terminal ig-like domain 4 80 1.8E-11 T 11-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 AMS64_07005 c845d533a3c9e106dbe6a99b53c11f7f 577 Pfam PF00759 Glycosyl hydrolase family 9 103 503 2.7E-21 T 11-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMS64_07005 c845d533a3c9e106dbe6a99b53c11f7f 577 Gene3D G3DSA:2.60.40.10 1 97 2.1E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_07005 c845d533a3c9e106dbe6a99b53c11f7f 577 Gene3D G3DSA:1.50.10.10 98 577 6.5E-203 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMS64_19400 6db0973de3f314b9d70711736c614f90 294 TIGRFAM TIGR01932 hflC: HflC protein 156 287 3.6E-54 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AMS64_19400 6db0973de3f314b9d70711736c614f90 294 TIGRFAM TIGR01932 hflC: HflC protein 1 148 6.6E-57 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AMS64_19400 6db0973de3f314b9d70711736c614f90 294 Pfam PF01145 SPFH domain / Band 7 family 22 202 2.9E-32 T 11-10-2018 IPR001107 Band 7 domain AMS64_19400 6db0973de3f314b9d70711736c614f90 294 SMART SM00244 18 187 2.6E-45 T 11-10-2018 IPR001107 Band 7 domain AMS64_19400 6db0973de3f314b9d70711736c614f90 294 Gene3D G3DSA:3.30.479.30 53 189 2.8E-22 T 11-10-2018 AMS64_19400 6db0973de3f314b9d70711736c614f90 294 PIRSF PIRSF005651 1 294 4.1E-99 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AMS64_19400 6db0973de3f314b9d70711736c614f90 294 SUPERFAMILY SSF117892 56 192 4.18E-27 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AMS64_19950 520b3eaf599b37ca3fdf02406ad0f658 537 Gene3D G3DSA:1.20.58.1510 314 512 1.7E-8 T 11-10-2018 AMS64_19950 520b3eaf599b37ca3fdf02406ad0f658 537 Pfam PF07728 AAA domain (dynein-related subfamily) 50 180 2.1E-21 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMS64_19950 520b3eaf599b37ca3fdf02406ad0f658 537 SMART SM00382 47 190 9.4E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_19950 520b3eaf599b37ca3fdf02406ad0f658 537 SUPERFAMILY SSF52540 31 297 7.54E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19950 520b3eaf599b37ca3fdf02406ad0f658 537 Gene3D G3DSA:3.40.50.300 12 229 1.5E-56 T 11-10-2018 AMS64_19950 520b3eaf599b37ca3fdf02406ad0f658 537 Pfam PF12592 Protein of unknown function (DUF3763) 471 522 8.1E-14 T 11-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 AMS64_19950 520b3eaf599b37ca3fdf02406ad0f658 537 Gene3D G3DSA:1.10.8.300 230 294 1.5E-27 T 11-10-2018 AMS64_19950 520b3eaf599b37ca3fdf02406ad0f658 537 Gene3D G3DSA:2.40.128.430 340 460 1.7E-8 T 11-10-2018 AMS64_01855 241d684e2061314a1f5efc15f1d4194b 598 SUPERFAMILY SSF143975 2 417 1.44E-132 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMS64_01855 241d684e2061314a1f5efc15f1d4194b 598 SUPERFAMILY SSF52016 418 596 1.8E-51 T 11-10-2018 AMS64_01855 241d684e2061314a1f5efc15f1d4194b 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMS64_01855 241d684e2061314a1f5efc15f1d4194b 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMS64_01855 241d684e2061314a1f5efc15f1d4194b 598 Gene3D G3DSA:3.50.30.80 418 565 2.4E-47 T 11-10-2018 AMS64_01855 241d684e2061314a1f5efc15f1d4194b 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 5 597 7.9E-260 T 11-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AMS64_01855 241d684e2061314a1f5efc15f1d4194b 598 Pfam PF00920 Dehydratase family 66 594 4.5E-146 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMS64_01855 241d684e2061314a1f5efc15f1d4194b 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 55.192 T 11-10-2018 AMS64_00245 f5a0461ad39b57fa0d2805ec6911edae 350 Gene3D G3DSA:3.40.50.2000 162 348 2.9E-38 T 11-10-2018 AMS64_00245 f5a0461ad39b57fa0d2805ec6911edae 350 SUPERFAMILY SSF53756 10 345 5.02E-89 T 11-10-2018 AMS64_00245 f5a0461ad39b57fa0d2805ec6911edae 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 306 4.4E-54 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AMS64_00245 f5a0461ad39b57fa0d2805ec6911edae 350 Gene3D G3DSA:3.40.50.2000 4 156 8.4E-26 T 11-10-2018 AMS64_06220 47dd9d5c97fbd1e7cf9767919b28b8a5 345 Pfam PF06144 DNA polymerase III, delta subunit 20 188 4.2E-35 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AMS64_06220 47dd9d5c97fbd1e7cf9767919b28b8a5 345 Gene3D G3DSA:3.40.50.300 1 138 1.0E-47 T 11-10-2018 AMS64_06220 47dd9d5c97fbd1e7cf9767919b28b8a5 345 Gene3D G3DSA:1.20.272.10 212 336 1.7E-34 T 11-10-2018 AMS64_06220 47dd9d5c97fbd1e7cf9767919b28b8a5 345 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 212 328 2.3E-17 T 11-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_06220 47dd9d5c97fbd1e7cf9767919b28b8a5 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 328 4.3E-86 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AMS64_06220 47dd9d5c97fbd1e7cf9767919b28b8a5 345 Gene3D G3DSA:1.10.8.60 143 211 1.1E-18 T 11-10-2018 AMS64_06220 47dd9d5c97fbd1e7cf9767919b28b8a5 345 SUPERFAMILY SSF52540 1 208 3.29E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_06220 47dd9d5c97fbd1e7cf9767919b28b8a5 345 SUPERFAMILY SSF48019 210 328 2.38E-24 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMS64_11130 1fad2a09fd4d5a6be3f98bd9ce261d14 447 Gene3D G3DSA:1.20.272.10 241 345 9.3E-44 T 11-10-2018 AMS64_11130 1fad2a09fd4d5a6be3f98bd9ce261d14 447 SMART SM00382 50 166 5.9E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_11130 1fad2a09fd4d5a6be3f98bd9ce261d14 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 160 6.6E-16 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_11130 1fad2a09fd4d5a6be3f98bd9ce261d14 447 Pfam PF16193 AAA C-terminal domain 190 267 3.6E-20 T 11-10-2018 IPR032423 AAA C-terminal domain AMS64_11130 1fad2a09fd4d5a6be3f98bd9ce261d14 447 Gene3D G3DSA:3.40.50.300 8 165 6.8E-46 T 11-10-2018 AMS64_11130 1fad2a09fd4d5a6be3f98bd9ce261d14 447 Gene3D G3DSA:1.10.3710.10 346 447 1.2E-37 T 11-10-2018 AMS64_11130 1fad2a09fd4d5a6be3f98bd9ce261d14 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 7.2E-68 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal AMS64_11130 1fad2a09fd4d5a6be3f98bd9ce261d14 447 SUPERFAMILY SSF48019 252 434 3.63E-74 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMS64_11130 1fad2a09fd4d5a6be3f98bd9ce261d14 447 Gene3D G3DSA:1.10.8.60 166 240 1.2E-16 T 11-10-2018 AMS64_11130 1fad2a09fd4d5a6be3f98bd9ce261d14 447 SUPERFAMILY SSF52540 12 228 3.08E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_02415 492b5c3d3b5f5ba5d20dc17aff8ab10f 260 Pfam PF12571 Phage tail-collar fibre protein 4 154 3.0E-25 T 11-10-2018 IPR022225 Phage tail fibre protein AMS64_10630 cb4f293a1362733265fbcc461d83b11d 335 Gene3D G3DSA:3.40.50.300 22 194 6.2E-15 T 11-10-2018 AMS64_10630 cb4f293a1362733265fbcc461d83b11d 335 SUPERFAMILY SSF52540 42 277 1.58E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10630 cb4f293a1362733265fbcc461d83b11d 335 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 47 60 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMS64_10630 cb4f293a1362733265fbcc461d83b11d 335 SMART SM00382 43 199 0.0061 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_10630 cb4f293a1362733265fbcc461d83b11d 335 Pfam PF05621 Bacterial TniB protein 25 267 4.9E-33 T 11-10-2018 IPR008868 Bacterial TniB AMS64_21630 0a9499f640ee57296d66a6d872c5176b 350 Gene3D G3DSA:1.10.287.470 114 179 1.9E-7 T 11-10-2018 AMS64_21630 0a9499f640ee57296d66a6d872c5176b 350 SUPERFAMILY SSF111369 44 110 7.98E-8 T 11-10-2018 AMS64_21630 0a9499f640ee57296d66a6d872c5176b 350 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 161 288 7.8E-21 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMS64_21630 0a9499f640ee57296d66a6d872c5176b 350 SUPERFAMILY SSF111369 160 285 2.48E-15 T 11-10-2018 AMS64_21630 0a9499f640ee57296d66a6d872c5176b 350 Pfam PF00529 HlyD membrane-fusion protein of T1SS 107 339 2.1E-9 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_21630 0a9499f640ee57296d66a6d872c5176b 350 Gene3D G3DSA:2.40.30.170 226 344 6.1E-37 T 11-10-2018 AMS64_21630 0a9499f640ee57296d66a6d872c5176b 350 Pfam PF13533 Biotin-lipoyl like 44 92 2.2E-15 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMS64_21630 0a9499f640ee57296d66a6d872c5176b 350 Gene3D G3DSA:2.40.50.100 45 113 8.2E-13 T 11-10-2018 AMS64_05820 384c4044f202eab3fbf709ac6062d0be 283 Gene3D G3DSA:3.40.50.1980 143 283 7.3E-35 T 11-10-2018 AMS64_05820 384c4044f202eab3fbf709ac6062d0be 283 Pfam PF01497 Periplasmic binding protein 31 255 1.1E-27 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AMS64_05820 384c4044f202eab3fbf709ac6062d0be 283 SUPERFAMILY SSF53807 29 279 5.49E-45 T 11-10-2018 AMS64_05820 384c4044f202eab3fbf709ac6062d0be 283 Gene3D G3DSA:3.40.50.1980 25 142 5.7E-32 T 11-10-2018 AMS64_11505 85225b2ca8767b87752eaa2311a00450 105 Pfam PF01906 Putative heavy-metal-binding 1 105 1.2E-40 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AMS64_11505 85225b2ca8767b87752eaa2311a00450 105 Gene3D G3DSA:3.30.110.70 2 105 2.2E-44 T 11-10-2018 AMS64_11505 85225b2ca8767b87752eaa2311a00450 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.934 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AMS64_11505 85225b2ca8767b87752eaa2311a00450 105 SUPERFAMILY SSF117782 1 105 3.53E-39 T 11-10-2018 IPR035439 UPF0145 domain superfamily AMS64_04235 38fd62e0028ba4724e8d382bbbb9ba5e 340 SMART SM00267 168 338 5.9E-49 T 11-10-2018 IPR000160 GGDEF domain AMS64_04235 38fd62e0028ba4724e8d382bbbb9ba5e 340 Gene3D G3DSA:3.30.70.270 164 337 1.2E-48 T 11-10-2018 AMS64_04235 38fd62e0028ba4724e8d382bbbb9ba5e 340 SUPERFAMILY SSF55073 184 336 4.87E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_04235 38fd62e0028ba4724e8d382bbbb9ba5e 340 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 334 6.7E-39 T 11-10-2018 IPR000160 GGDEF domain AMS64_04235 38fd62e0028ba4724e8d382bbbb9ba5e 340 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 336 9.6E-36 T 11-10-2018 IPR000160 GGDEF domain AMS64_02960 97e3152acd4c7fdded2e464e8b7697df 123 Hamap MF_00048 UPF0102 protein YraN [yraN]. 12 123 21.021 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AMS64_02960 97e3152acd4c7fdded2e464e8b7697df 123 Gene3D G3DSA:3.40.1350.10 19 123 2.3E-35 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AMS64_02960 97e3152acd4c7fdded2e464e8b7697df 123 Pfam PF02021 Uncharacterised protein family UPF0102 20 110 6.2E-28 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AMS64_02960 97e3152acd4c7fdded2e464e8b7697df 123 SUPERFAMILY SSF52980 14 118 2.01E-20 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMS64_02960 97e3152acd4c7fdded2e464e8b7697df 123 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 13 123 9.0E-36 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AMS64_16315 167f1ef35c49689b1d6d440b46c97ddb 575 Pfam PF03471 Transporter associated domain 496 570 2.2E-11 T 11-10-2018 IPR005170 Transporter-associated domain AMS64_16315 167f1ef35c49689b1d6d440b46c97ddb 575 SMART SM01091 493 571 1.2E-14 T 11-10-2018 IPR005170 Transporter-associated domain AMS64_16315 167f1ef35c49689b1d6d440b46c97ddb 575 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 574 51.874 T 11-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 AMS64_16315 167f1ef35c49689b1d6d440b46c97ddb 575 Gene3D G3DSA:3.30.70.1450 408 484 3.1E-12 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_16315 167f1ef35c49689b1d6d440b46c97ddb 575 Pfam PF02080 TrkA-C domain 422 484 1.6E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMS64_16315 167f1ef35c49689b1d6d440b46c97ddb 575 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 1.3E-54 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMS64_16315 167f1ef35c49689b1d6d440b46c97ddb 575 Gene3D G3DSA:3.30.465.10 494 575 1.2E-6 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMS64_16315 167f1ef35c49689b1d6d440b46c97ddb 575 SUPERFAMILY SSF116726 409 485 8.24E-12 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_16315 167f1ef35c49689b1d6d440b46c97ddb 575 SUPERFAMILY SSF56176 498 568 1.94E-8 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMS64_16315 167f1ef35c49689b1d6d440b46c97ddb 575 Gene3D G3DSA:1.20.1530.20 7 392 1.8E-17 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMS64_05100 fac1fb12cb40f8d8f95336ba6eeb3fb4 505 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AMS64_05100 fac1fb12cb40f8d8f95336ba6eeb3fb4 505 Gene3D G3DSA:1.20.1730.10 22 497 4.9E-97 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AMS64_05100 fac1fb12cb40f8d8f95336ba6eeb3fb4 505 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 1.5E-225 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AMS64_05100 fac1fb12cb40f8d8f95336ba6eeb3fb4 505 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AMS64_05100 fac1fb12cb40f8d8f95336ba6eeb3fb4 505 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 1.9E-122 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMS64_05100 fac1fb12cb40f8d8f95336ba6eeb3fb4 505 Pfam PF00474 Sodium:solute symporter family 35 437 3.0E-137 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 Gene3D G3DSA:2.40.160.20 13 213 6.7E-59 T 11-10-2018 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 Pfam PF01389 OmpA-like transmembrane domain 23 196 7.2E-41 T 11-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 ProSitePatterns PS01068 OmpA-like domain. 261 305 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 Gene3D G3DSA:3.30.1330.60 214 341 1.5E-43 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 SUPERFAMILY SSF56925 23 198 8.63E-33 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 PRINTS PR01022 Outer membrane protein A signature 168 182 5.3E-34 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 PRINTS PR01022 Outer membrane protein A signature 244 263 5.3E-34 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 PRINTS PR01022 Outer membrane protein A signature 112 128 5.3E-34 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 PRINTS PR01022 Outer membrane protein A signature 182 196 5.3E-34 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 PRINTS PR01022 Outer membrane protein A signature 215 230 5.3E-34 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 PRINTS PR01022 Outer membrane protein A signature 283 302 5.3E-34 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 PRINTS PR01022 Outer membrane protein A signature 316 329 5.3E-34 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 SUPERFAMILY SSF103088 216 337 8.89E-32 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 Pfam PF00691 OmpA family 226 314 1.2E-23 T 11-10-2018 IPR006665 OmpA-like domain AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 PRINTS PR01021 OMPA domain signature 259 274 9.8E-24 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 PRINTS PR01021 OMPA domain signature 274 290 9.8E-24 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_04230 fd2a18fd8738d7c3f5b9ef68162d5165 345 PRINTS PR01021 OMPA domain signature 227 249 9.8E-24 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_07360 f539d38d30bc97ec49987a312222c555 700 Gene3D G3DSA:1.10.490.80 600 697 9.4E-13 T 11-10-2018 AMS64_07360 f539d38d30bc97ec49987a312222c555 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 141 157 6.8E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07360 f539d38d30bc97ec49987a312222c555 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 74 93 6.8E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07360 f539d38d30bc97ec49987a312222c555 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 241 255 6.8E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07360 f539d38d30bc97ec49987a312222c555 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 160 178 6.8E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07360 f539d38d30bc97ec49987a312222c555 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 37 50 6.8E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07360 f539d38d30bc97ec49987a312222c555 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 190 207 6.8E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07360 f539d38d30bc97ec49987a312222c555 700 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 146 169 - T 11-10-2018 IPR025505 FHIPEP conserved site AMS64_07360 f539d38d30bc97ec49987a312222c555 700 PIRSF PIRSF005419 16 700 5.1E-245 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07360 f539d38d30bc97ec49987a312222c555 700 Pfam PF00771 FHIPEP family 31 689 9.1E-270 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_07360 f539d38d30bc97ec49987a312222c555 700 Gene3D G3DSA:3.40.30.60 365 507 1.6E-51 T 11-10-2018 AMS64_07360 f539d38d30bc97ec49987a312222c555 700 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 697 1.4E-265 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AMS64_07360 f539d38d30bc97ec49987a312222c555 700 Gene3D G3DSA:1.10.8.540 508 597 5.7E-25 T 11-10-2018 AMS64_16725 9eb947b6f56bb4887a56bb0d20ec4b5e 183 SUPERFAMILY SSF53335 19 147 7.9E-8 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_16725 9eb947b6f56bb4887a56bb0d20ec4b5e 183 Gene3D G3DSA:3.40.50.150 4 175 2.8E-11 T 11-10-2018 AMS64_11150 00adb9e8b4bc874eed793233cc922110 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.5E-46 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMS64_11150 00adb9e8b4bc874eed793233cc922110 371 PIRSF PIRSF000183 1 371 3.3E-149 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AMS64_11150 00adb9e8b4bc874eed793233cc922110 371 SMART SM01003 4 137 6.4E-80 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMS64_11150 00adb9e8b4bc874eed793233cc922110 371 SMART SM01002 149 297 2.3E-83 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMS64_11150 00adb9e8b4bc874eed793233cc922110 371 SUPERFAMILY SSF52283 1 359 4.59E-64 T 11-10-2018 AMS64_11150 00adb9e8b4bc874eed793233cc922110 371 SUPERFAMILY SSF51735 137 303 7.2E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_11150 00adb9e8b4bc874eed793233cc922110 371 Gene3D G3DSA:3.40.50.720 130 305 3.2E-135 T 11-10-2018 AMS64_11150 00adb9e8b4bc874eed793233cc922110 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 7.8E-81 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMS64_11150 00adb9e8b4bc874eed793233cc922110 371 Gene3D G3DSA:3.40.50.720 3 353 3.2E-135 T 11-10-2018 AMS64_11150 00adb9e8b4bc874eed793233cc922110 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 1.8E-154 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AMS64_20735 9ce33d6fe555823a01cf57aa64d19121 226 Gene3D G3DSA:1.20.58.220 1 226 1.6E-64 T 11-10-2018 IPR038078 PhoU-like domain superfamily AMS64_20735 9ce33d6fe555823a01cf57aa64d19121 226 Pfam PF01865 Protein of unknown function DUF47 7 224 3.6E-66 T 11-10-2018 IPR018445 Putative phosphate transport regulator AMS64_20735 9ce33d6fe555823a01cf57aa64d19121 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 5 226 5.6E-68 T 11-10-2018 IPR002727 Protein of unknown function DUF47 AMS64_20735 9ce33d6fe555823a01cf57aa64d19121 226 SUPERFAMILY SSF109755 29 209 1.06E-15 T 11-10-2018 AMS64_05155 3f333aa79f6032dfa1482754113b8b44 188 Gene3D G3DSA:1.10.10.60 1 65 3.3E-22 T 11-10-2018 AMS64_05155 3f333aa79f6032dfa1482754113b8b44 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 6.4E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_05155 3f333aa79f6032dfa1482754113b8b44 188 Pfam PF16925 Bacterial transcriptional repressor C-terminal 96 184 1.7E-8 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMS64_05155 3f333aa79f6032dfa1482754113b8b44 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMS64_05155 3f333aa79f6032dfa1482754113b8b44 188 SUPERFAMILY SSF46689 3 78 1.85E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_05155 3f333aa79f6032dfa1482754113b8b44 188 Gene3D G3DSA:1.10.357.10 66 188 3.1E-19 T 11-10-2018 AMS64_05155 3f333aa79f6032dfa1482754113b8b44 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.1E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_05155 3f333aa79f6032dfa1482754113b8b44 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.1E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_05155 3f333aa79f6032dfa1482754113b8b44 188 SUPERFAMILY SSF48498 76 186 6.18E-23 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMS64_01720 f6fa7a6a41413624aa42ff295991cd99 234 Pfam PF03475 3-alpha domain 174 216 3.4E-10 T 11-10-2018 IPR005163 3-alpha domain AMS64_01720 f6fa7a6a41413624aa42ff295991cd99 234 Pfam PF03473 MOSC domain 44 155 1.9E-18 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AMS64_01720 f6fa7a6a41413624aa42ff295991cd99 234 Gene3D G3DSA:2.40.33.20 1 232 3.1E-71 T 11-10-2018 AMS64_01720 f6fa7a6a41413624aa42ff295991cd99 234 SUPERFAMILY SSF50800 4 228 3.82E-66 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMS64_04450 7c3f916f527a3c76b3996948dbe66a09 669 SMART SM00283 407 668 2.5E-56 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_04450 7c3f916f527a3c76b3996948dbe66a09 669 Gene3D G3DSA:1.10.287.950 338 668 1.5E-62 T 11-10-2018 AMS64_04450 7c3f916f527a3c76b3996948dbe66a09 669 SUPERFAMILY SSF58104 360 669 6.8E-66 T 11-10-2018 AMS64_04450 7c3f916f527a3c76b3996948dbe66a09 669 Pfam PF00672 HAMP domain 338 388 6.1E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_04450 7c3f916f527a3c76b3996948dbe66a09 669 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 631 2.1E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_04450 7c3f916f527a3c76b3996948dbe66a09 669 SMART SM00304 338 392 1.1E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13235 63aa5fab39a7cab692e9e292ca2d2a21 180 Pfam PF07273 Protein of unknown function (DUF1439) 20 172 7.4E-44 T 11-10-2018 IPR010835 Protein of unknown function DUF1439 AMS64_13235 63aa5fab39a7cab692e9e292ca2d2a21 180 Gene3D G3DSA:3.15.10.40 14 179 5.2E-50 T 11-10-2018 AMS64_15290 3267d556899fc157c4df43a1cee31377 345 PRINTS PR00183 E.coli/Salmonella-type porin signature 21 37 1.4E-6 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AMS64_15290 3267d556899fc157c4df43a1cee31377 345 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 1.4E-6 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AMS64_15290 3267d556899fc157c4df43a1cee31377 345 PRINTS PR00183 E.coli/Salmonella-type porin signature 234 251 1.4E-6 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AMS64_15290 3267d556899fc157c4df43a1cee31377 345 Pfam PF13609 Gram-negative porin 7 326 8.8E-36 T 11-10-2018 AMS64_15290 3267d556899fc157c4df43a1cee31377 345 SUPERFAMILY SSF56935 21 345 3.66E-54 T 11-10-2018 AMS64_15290 3267d556899fc157c4df43a1cee31377 345 Gene3D G3DSA:2.40.160.10 21 345 2.6E-73 T 11-10-2018 IPR023614 Porin domain superfamily AMS64_06555 010f10aaef89bc9de0aa8b41da6ac66a 545 Gene3D G3DSA:1.10.287.950 213 545 2.4E-82 T 11-10-2018 AMS64_06555 010f10aaef89bc9de0aa8b41da6ac66a 545 SUPERFAMILY SSF58104 234 545 6.54E-80 T 11-10-2018 AMS64_06555 010f10aaef89bc9de0aa8b41da6ac66a 545 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 185 2.7E-16 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMS64_06555 010f10aaef89bc9de0aa8b41da6ac66a 545 SMART SM00283 283 544 3.0E-83 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_06555 010f10aaef89bc9de0aa8b41da6ac66a 545 Pfam PF00672 HAMP domain 216 264 2.3E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_06555 010f10aaef89bc9de0aa8b41da6ac66a 545 SMART SM00304 214 268 4.7E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_06555 010f10aaef89bc9de0aa8b41da6ac66a 545 SMART SM00304 303 356 110.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_06555 010f10aaef89bc9de0aa8b41da6ac66a 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 510 9.2E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 SUPERFAMILY SSF51419 27 283 3.78E-80 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.955 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 281 1.8E-72 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 SUPERFAMILY SSF50621 254 414 1.07E-51 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 412 2.5E-164 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 Gene3D G3DSA:2.40.37.10 18 409 6.6E-150 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 Gene3D G3DSA:3.20.20.10 35 276 6.6E-150 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 6.4E-23 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 1.0E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.0E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 299 317 1.0E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.0E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 4.9E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 4.9E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 4.9E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 4.9E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 271 290 4.9E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_02710 76c3123d3b3832cc06d01206e9ae55e9 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMS64_21960 8f4cc72ce1e9c19158ac9ce07d36d7f6 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 1.4E-30 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_21960 8f4cc72ce1e9c19158ac9ce07d36d7f6 326 Gene3D G3DSA:3.10.290.10 2 76 7.4E-20 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMS64_21960 8f4cc72ce1e9c19158ac9ce07d36d7f6 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_21960 8f4cc72ce1e9c19158ac9ce07d36d7f6 326 Pfam PF01479 S4 domain 18 65 1.3E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_21960 8f4cc72ce1e9c19158ac9ce07d36d7f6 326 Gene3D G3DSA:3.30.2350.10 84 316 3.5E-73 T 11-10-2018 AMS64_21960 8f4cc72ce1e9c19158ac9ce07d36d7f6 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 3.4E-104 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_21960 8f4cc72ce1e9c19158ac9ce07d36d7f6 326 SUPERFAMILY SSF55174 17 69 4.04E-10 T 11-10-2018 AMS64_21960 8f4cc72ce1e9c19158ac9ce07d36d7f6 326 SUPERFAMILY SSF55120 78 318 8.43E-79 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_21960 8f4cc72ce1e9c19158ac9ce07d36d7f6 326 SMART SM00363 18 76 4.5E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01445 fde0f05e58a64e77ed08535b44910494 120 ProSitePatterns PS00287 Cysteine proteases inhibitors signature. 68 81 - T 11-10-2018 IPR018073 Proteinase inhibitor I25, cystatin, conserved site AMS64_01445 fde0f05e58a64e77ed08535b44910494 120 SUPERFAMILY SSF54403 28 102 5.59E-13 T 11-10-2018 AMS64_01445 fde0f05e58a64e77ed08535b44910494 120 Gene3D G3DSA:3.10.450.10 24 93 6.7E-7 T 11-10-2018 AMS64_01445 fde0f05e58a64e77ed08535b44910494 120 Pfam PF00031 Cystatin domain 46 99 6.2E-5 T 11-10-2018 IPR000010 Cystatin domain GO:0004869 AMS64_02045 7e93e6e0ce48e099b04deba75dbcc295 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 2.5E-29 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMS64_02045 7e93e6e0ce48e099b04deba75dbcc295 166 Gene3D G3DSA:3.30.230.10 74 166 1.3E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_02045 7e93e6e0ce48e099b04deba75dbcc295 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 9.7E-69 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMS64_02045 7e93e6e0ce48e099b04deba75dbcc295 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AMS64_02045 7e93e6e0ce48e099b04deba75dbcc295 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 5.6E-30 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AMS64_02045 7e93e6e0ce48e099b04deba75dbcc295 166 SUPERFAMILY SSF54211 79 158 4.05E-27 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_02045 7e93e6e0ce48e099b04deba75dbcc295 166 SUPERFAMILY SSF54768 9 76 1.99E-23 T 11-10-2018 AMS64_02045 7e93e6e0ce48e099b04deba75dbcc295 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.216 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMS64_02045 7e93e6e0ce48e099b04deba75dbcc295 166 Gene3D G3DSA:3.30.160.20 1 72 1.2E-32 T 11-10-2018 AMS64_04485 2435a2abebf9a219dc4d672dcf1725d4 229 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 1.9E-89 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AMS64_04485 2435a2abebf9a219dc4d672dcf1725d4 229 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 42.778 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AMS64_04485 2435a2abebf9a219dc4d672dcf1725d4 229 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 5.6E-44 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMS64_05120 ef377d3fe25fe4d12ba7e85b7c80db3a 352 SUPERFAMILY SSF55120 3 334 3.02E-97 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_05120 ef377d3fe25fe4d12ba7e85b7c80db3a 352 Gene3D G3DSA:3.30.2340.10 165 297 1.1E-119 T 11-10-2018 AMS64_05120 ef377d3fe25fe4d12ba7e85b7c80db3a 352 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 185 332 2.6E-20 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_05120 ef377d3fe25fe4d12ba7e85b7c80db3a 352 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 5 166 4.2E-41 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_05120 ef377d3fe25fe4d12ba7e85b7c80db3a 352 Gene3D G3DSA:3.30.2350.20 15 332 1.1E-119 T 11-10-2018 AMS64_05120 ef377d3fe25fe4d12ba7e85b7c80db3a 352 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 3 233 7.2E-57 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_05120 ef377d3fe25fe4d12ba7e85b7c80db3a 352 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 75 88 - T 11-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AMS64_05120 ef377d3fe25fe4d12ba7e85b7c80db3a 352 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 3 337 27.85 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_12870 a0c7b519120ae786f468749ae9b6cea2 546 Gene3D G3DSA:1.10.287.950 214 546 3.3E-80 T 11-10-2018 AMS64_12870 a0c7b519120ae786f468749ae9b6cea2 546 Pfam PF00672 HAMP domain 216 265 3.8E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_12870 a0c7b519120ae786f468749ae9b6cea2 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 511 2.9E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_12870 a0c7b519120ae786f468749ae9b6cea2 546 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 188 3.0E-13 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMS64_12870 a0c7b519120ae786f468749ae9b6cea2 546 SMART SM00283 284 545 7.4E-82 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_12870 a0c7b519120ae786f468749ae9b6cea2 546 SMART SM00304 215 269 5.3E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_12870 a0c7b519120ae786f468749ae9b6cea2 546 SMART SM00304 270 322 100.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_12870 a0c7b519120ae786f468749ae9b6cea2 546 SUPERFAMILY SSF58104 242 545 1.24E-78 T 11-10-2018 AMS64_02970 ec2fc026f53eeedce3413cad70db044c 277 SUPERFAMILY SSF53790 5 224 2.75E-82 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMS64_02970 ec2fc026f53eeedce3413cad70db044c 277 Gene3D G3DSA:3.30.950.10 114 233 3.1E-41 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMS64_02970 ec2fc026f53eeedce3413cad70db044c 277 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 275 7.8E-94 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AMS64_02970 ec2fc026f53eeedce3413cad70db044c 277 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 AMS64_02970 ec2fc026f53eeedce3413cad70db044c 277 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 226 37.426 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AMS64_02970 ec2fc026f53eeedce3413cad70db044c 277 Gene3D G3DSA:3.40.1010.10 1 113 4.9E-45 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMS64_02970 ec2fc026f53eeedce3413cad70db044c 277 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 198 1.1E-30 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMS64_02970 ec2fc026f53eeedce3413cad70db044c 277 PIRSF PIRSF005917 1 277 1.2E-102 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AMS64_16935 6ed5809c81a6ee3191c85cbd40c9d808 354 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 14 340 9.2E-121 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AMS64_16935 6ed5809c81a6ee3191c85cbd40c9d808 354 Pfam PF01758 Sodium Bile acid symporter family 59 253 1.9E-37 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AMS64_16935 6ed5809c81a6ee3191c85cbd40c9d808 354 Gene3D G3DSA:1.20.1530.20 9 342 1.6E-18 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMS64_16935 6ed5809c81a6ee3191c85cbd40c9d808 354 PIRSF PIRSF005508 1 352 3.3E-117 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AMS64_11480 7140fa3b023bc2a5f56cbaf398aedaac 352 SUPERFAMILY SSF46548 213 339 2.09E-15 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_11480 7140fa3b023bc2a5f56cbaf398aedaac 352 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_11480 7140fa3b023bc2a5f56cbaf398aedaac 352 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 230 241 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_11480 7140fa3b023bc2a5f56cbaf398aedaac 352 Pfam PF17179 4Fe-4S dicluster domain 229 326 5.4E-31 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_11480 7140fa3b023bc2a5f56cbaf398aedaac 352 TIGRFAM TIGR02910 sulfite_red_A: sulfite reductase, subunit A 1 341 1.3E-152 T 11-10-2018 IPR014259 Sulphite reductase, subunit A AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 PIRSF PIRSF002560 1 157 4.2E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 PRINTS PR00601 Bacterioferritin signature 23 43 1.3E-74 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 PRINTS PR00601 Bacterioferritin signature 3 22 1.3E-74 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 PRINTS PR00601 Bacterioferritin signature 65 85 1.3E-74 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 PRINTS PR00601 Bacterioferritin signature 128 149 1.3E-74 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 PRINTS PR00601 Bacterioferritin signature 86 106 1.3E-74 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 PRINTS PR00601 Bacterioferritin signature 44 64 1.3E-74 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 PRINTS PR00601 Bacterioferritin signature 107 127 1.3E-74 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 SUPERFAMILY SSF47240 1 154 5.42E-55 T 11-10-2018 IPR009078 Ferritin-like superfamily AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 Pfam PF00210 Ferritin-like domain 8 144 9.6E-40 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 3.2E-80 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMS64_03815 14d1d1f1ff2fac0c7e1a46de076b55d2 159 Gene3D G3DSA:1.20.1260.10 1 157 3.1E-71 T 11-10-2018 IPR012347 Ferritin-like AMS64_22425 957507c52579eadaad76a6edf7f0f974 323 Gene3D G3DSA:1.10.10.10 1 86 4.9E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_22425 957507c52579eadaad76a6edf7f0f974 323 SUPERFAMILY SSF46785 2 110 9.42E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_22425 957507c52579eadaad76a6edf7f0f974 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 3.6E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_22425 957507c52579eadaad76a6edf7f0f974 323 Gene3D G3DSA:3.40.190.10 93 301 1.6E-67 T 11-10-2018 AMS64_22425 957507c52579eadaad76a6edf7f0f974 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.9E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_22425 957507c52579eadaad76a6edf7f0f974 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.9E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_22425 957507c52579eadaad76a6edf7f0f974 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.9E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_22425 957507c52579eadaad76a6edf7f0f974 323 SUPERFAMILY SSF53850 92 299 1.5E-32 T 11-10-2018 AMS64_22425 957507c52579eadaad76a6edf7f0f974 323 Gene3D G3DSA:3.40.190.10 166 266 1.6E-67 T 11-10-2018 AMS64_22425 957507c52579eadaad76a6edf7f0f974 323 Pfam PF03466 LysR substrate binding domain 92 287 8.6E-31 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_13340 cf5b334ce168702db5a8d74045a7f3f3 569 Pfam PF13444 Acetyltransferase (GNAT) domain 324 424 2.4E-22 T 11-10-2018 AMS64_13340 cf5b334ce168702db5a8d74045a7f3f3 569 SUPERFAMILY SSF55729 309 520 1.7E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_13340 cf5b334ce168702db5a8d74045a7f3f3 569 SUPERFAMILY SSF69593 59 244 6.54E-13 T 11-10-2018 AMS64_13340 cf5b334ce168702db5a8d74045a7f3f3 569 SMART SM00563 81 198 3.8E-11 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMS64_13340 cf5b334ce168702db5a8d74045a7f3f3 569 Pfam PF01553 Acyltransferase 71 194 5.4E-9 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMS64_17975 f51b8dd1fd70711432c565f1da76fc37 379 SUPERFAMILY SSF53756 6 377 4.22E-32 T 11-10-2018 AMS64_17975 f51b8dd1fd70711432c565f1da76fc37 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 373 3.8E-131 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AMS64_17975 f51b8dd1fd70711432c565f1da76fc37 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 376 1.1E-146 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AMS64_17975 f51b8dd1fd70711432c565f1da76fc37 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 42.127 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 Pfam PF13291 ACT domain 625 702 9.9E-15 T 11-10-2018 IPR002912 ACT domain AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 Gene3D G3DSA:1.10.3210.10 2 190 6.1E-79 T 11-10-2018 AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 5.2E-35 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 SUPERFAMILY SSF109604 3 190 2.01E-73 T 11-10-2018 AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 SUPERFAMILY SSF55021 628 702 2.43E-7 T 11-10-2018 AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 SMART SM00954 235 345 1.5E-59 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 SMART SM00471 41 153 1.1E-9 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 Gene3D G3DSA:3.30.460.10 194 325 1.4E-45 T 11-10-2018 AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 Pfam PF13328 HD domain 26 175 4.4E-52 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 SUPERFAMILY SSF81301 181 393 1.96E-59 T 11-10-2018 AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 Gene3D G3DSA:3.30.70.260 626 705 1.7E-13 T 11-10-2018 AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 Gene3D G3DSA:3.10.20.30 382 456 6.5E-28 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 701 2.1E-259 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 Pfam PF02824 TGS domain 389 448 1.3E-17 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AMS64_00265 8b881fb64b5f633084847371acbae2eb 705 SUPERFAMILY SSF81271 376 448 1.98E-19 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 495 1.4E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 534 1.4E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 553 1.4E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 509 1.4E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 445 553 1.3E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 SUPERFAMILY SSF52172 575 694 1.85E-38 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 SUPERFAMILY SSF47384 318 398 4.12E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 SUPERFAMILY SSF55785 194 311 6.7E-9 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 SUPERFAMILY SSF55874 387 554 2.88E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 SMART SM00448 575 686 7.4E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 SMART SM00388 333 398 4.0E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 Gene3D G3DSA:3.30.450.20 194 308 4.0E-10 T 11-10-2018 AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 Pfam PF00512 His Kinase A (phospho-acceptor) domain 333 397 3.7E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 SMART SM00387 445 556 1.4E-40 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 Gene3D G3DSA:1.10.287.130 309 396 3.6E-25 T 11-10-2018 AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 Pfam PF00072 Response regulator receiver domain 577 686 6.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 Gene3D G3DSA:3.30.565.10 399 555 1.7E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_13530 9eb5332d7d1a2f89d09c5eae796dfb4f 698 Gene3D G3DSA:3.40.50.12740 575 697 6.4E-39 T 11-10-2018 AMS64_01625 6e2eba794d0dfa681e4fdd42eddee1d5 377 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 308 337 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AMS64_01625 6e2eba794d0dfa681e4fdd42eddee1d5 377 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 19 375 1.5E-174 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AMS64_01625 6e2eba794d0dfa681e4fdd42eddee1d5 377 Gene3D G3DSA:3.40.1350.30 54 198 3.1E-137 T 11-10-2018 AMS64_01625 6e2eba794d0dfa681e4fdd42eddee1d5 377 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 19 375 3.2E-171 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AMS64_01625 6e2eba794d0dfa681e4fdd42eddee1d5 377 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 13 375 42.886 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AMS64_01625 6e2eba794d0dfa681e4fdd42eddee1d5 377 SUPERFAMILY SSF53335 18 374 1.56E-50 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_01625 6e2eba794d0dfa681e4fdd42eddee1d5 377 Gene3D G3DSA:3.40.50.150 22 370 3.1E-137 T 11-10-2018 AMS64_04055 7c5352cf0748f0aa7cace384ab65d94b 250 SUPERFAMILY SSF51735 9 236 3.66E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_04055 7c5352cf0748f0aa7cace384ab65d94b 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 236 1.0E-52 T 11-10-2018 AMS64_04055 7c5352cf0748f0aa7cace384ab65d94b 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04055 7c5352cf0748f0aa7cace384ab65d94b 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04055 7c5352cf0748f0aa7cace384ab65d94b 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04055 7c5352cf0748f0aa7cace384ab65d94b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 9.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04055 7c5352cf0748f0aa7cace384ab65d94b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 9.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04055 7c5352cf0748f0aa7cace384ab65d94b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 9.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04055 7c5352cf0748f0aa7cace384ab65d94b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 9.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04055 7c5352cf0748f0aa7cace384ab65d94b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 9.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04055 7c5352cf0748f0aa7cace384ab65d94b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 9.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04055 7c5352cf0748f0aa7cace384ab65d94b 250 Gene3D G3DSA:3.40.50.720 5 247 1.4E-66 T 11-10-2018 AMS64_08335 0435b40aa91b801a749f9f82f3a3777c 401 Pfam PF03918 Cytochrome C biogenesis protein 15 134 5.1E-43 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AMS64_08335 0435b40aa91b801a749f9f82f3a3777c 401 SUPERFAMILY SSF48452 274 378 1.9E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_08335 0435b40aa91b801a749f9f82f3a3777c 401 Gene3D G3DSA:1.10.8.640 24 109 1.3E-31 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AMS64_08335 0435b40aa91b801a749f9f82f3a3777c 401 Gene3D G3DSA:1.25.40.10 263 399 7.1E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_08335 0435b40aa91b801a749f9f82f3a3777c 401 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 11 129 9.7E-53 T 11-10-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF AMS64_09660 b4153853f723c0f87996688c399196bd 291 SUPERFAMILY SSF53474 104 274 5.15E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_09660 b4153853f723c0f87996688c399196bd 291 Gene3D G3DSA:3.40.50.1820 103 290 5.1E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_09660 b4153853f723c0f87996688c399196bd 291 Pfam PF00561 alpha/beta hydrolase fold 112 205 6.0E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 SUPERFAMILY SSF50465 330 433 8.63E-33 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 212 4.2E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 Gene3D G3DSA:2.40.30.10 240 326 1.2E-25 T 11-10-2018 AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 432 1.3E-200 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 SUPERFAMILY SSF52540 20 233 3.42E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 Gene3D G3DSA:2.40.30.10 329 434 1.5E-35 T 11-10-2018 AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 PRINTS PR00315 GTP-binding elongation factor signature 162 171 9.3E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 PRINTS PR00315 GTP-binding elongation factor signature 89 97 9.3E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 PRINTS PR00315 GTP-binding elongation factor signature 28 41 9.3E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 PRINTS PR00315 GTP-binding elongation factor signature 109 119 9.3E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 PRINTS PR00315 GTP-binding elongation factor signature 125 136 9.3E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 Gene3D G3DSA:3.40.50.300 4 238 1.0E-72 T 11-10-2018 AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 472 53.727 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 SUPERFAMILY SSF50447 242 327 4.86E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMS64_04690 5b8c9cd382e1c5607aa1d1f09c557104 475 Pfam PF00009 Elongation factor Tu GTP binding domain 26 212 4.6E-44 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_01370 b423ce60bf9913ace266749af18451aa 214 Pfam PF13972 Bacterial transcriptional repressor 56 195 6.0E-43 T 11-10-2018 IPR025722 Bacterial transcriptional repressor TetR AMS64_01370 b423ce60bf9913ace266749af18451aa 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 6.7E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_01370 b423ce60bf9913ace266749af18451aa 214 Gene3D G3DSA:1.10.357.10 1 211 8.1E-76 T 11-10-2018 AMS64_01370 b423ce60bf9913ace266749af18451aa 214 SUPERFAMILY SSF46689 2 71 3.25E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_01370 b423ce60bf9913ace266749af18451aa 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_01370 b423ce60bf9913ace266749af18451aa 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_01280 e9ac46c8d1670a50a6d133dbbfebc937 259 Pfam PF06426 Serine acetyltransferase, N-terminal 9 111 7.2E-38 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AMS64_01280 e9ac46c8d1670a50a6d133dbbfebc937 259 Gene3D G3DSA:2.160.10.10 142 259 6.9E-36 T 11-10-2018 AMS64_01280 e9ac46c8d1670a50a6d133dbbfebc937 259 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 81 241 7.8E-74 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AMS64_01280 e9ac46c8d1670a50a6d133dbbfebc937 259 Gene3D G3DSA:1.10.3130.10 1 141 4.4E-52 T 11-10-2018 AMS64_01280 e9ac46c8d1670a50a6d133dbbfebc937 259 SUPERFAMILY SSF51161 6 257 4.3E-64 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_01280 e9ac46c8d1670a50a6d133dbbfebc937 259 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 192 226 3.2E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_01280 e9ac46c8d1670a50a6d133dbbfebc937 259 PIRSF PIRSF000441 74 257 3.9E-58 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AMS64_01280 e9ac46c8d1670a50a6d133dbbfebc937 259 PIRSF PIRSF000441 7 60 1300.0 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AMS64_01280 e9ac46c8d1670a50a6d133dbbfebc937 259 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 201 229 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMS64_01280 e9ac46c8d1670a50a6d133dbbfebc937 259 SMART SM00971 8 112 2.1E-60 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AMS64_16115 f9505ca3a4bc5331eb6c84d457f1d748 492 Pfam PF00367 phosphotransferase system, EIIB 420 453 1.5E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMS64_16115 f9505ca3a4bc5331eb6c84d457f1d748 492 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 431 448 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMS64_16115 f9505ca3a4bc5331eb6c84d457f1d748 492 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 489 1.2E-214 T 11-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 AMS64_16115 f9505ca3a4bc5331eb6c84d457f1d748 492 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 391 478 6.9E-23 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMS64_16115 f9505ca3a4bc5331eb6c84d457f1d748 492 SUPERFAMILY SSF55604 417 490 3.53E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AMS64_16115 f9505ca3a4bc5331eb6c84d457f1d748 492 Gene3D G3DSA:3.30.1360.60 413 492 2.5E-25 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AMS64_16115 f9505ca3a4bc5331eb6c84d457f1d748 492 Pfam PF02378 Phosphotransferase system, EIIC 12 331 1.5E-78 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMS64_21940 d6a2bea375d358c8ec05b7501e07bacb 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 1.8E-14 T 11-10-2018 AMS64_21940 d6a2bea375d358c8ec05b7501e07bacb 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.4E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMS64_21940 d6a2bea375d358c8ec05b7501e07bacb 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.4E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMS64_21940 d6a2bea375d358c8ec05b7501e07bacb 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.4E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMS64_21940 d6a2bea375d358c8ec05b7501e07bacb 153 SUPERFAMILY SSF46785 5 67 1.17E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_21940 d6a2bea375d358c8ec05b7501e07bacb 153 Gene3D G3DSA:3.30.70.920 59 141 2.3E-34 T 11-10-2018 AMS64_21940 d6a2bea375d358c8ec05b7501e07bacb 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMS64_21940 d6a2bea375d358c8ec05b7501e07bacb 153 Pfam PF01037 Lrp/AsnC ligand binding domain 73 144 2.1E-17 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMS64_21940 d6a2bea375d358c8ec05b7501e07bacb 153 SMART SM00344 7 114 4.0E-47 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMS64_21940 d6a2bea375d358c8ec05b7501e07bacb 153 SUPERFAMILY SSF54909 68 150 6.44E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMS64_21940 d6a2bea375d358c8ec05b7501e07bacb 153 Gene3D G3DSA:1.10.10.10 3 58 1.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_07010 3380d73e43312e20925d23d5d91d5516 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 308 7.4E-17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_07010 3380d73e43312e20925d23d5d91d5516 330 SUPERFAMILY SSF52540 10 261 4.47E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07010 3380d73e43312e20925d23d5d91d5516 330 SMART SM00382 44 240 5.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_07010 3380d73e43312e20925d23d5d91d5516 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 328 1.8E-21 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_07010 3380d73e43312e20925d23d5d91d5516 330 Gene3D G3DSA:3.40.50.300 8 330 1.1E-82 T 11-10-2018 AMS64_07010 3380d73e43312e20925d23d5d91d5516 330 Pfam PF00005 ABC transporter 35 191 2.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_07010 3380d73e43312e20925d23d5d91d5516 330 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_05740 f31fd6c892733ed8b76b33da7d8c0b98 322 Gene3D G3DSA:2.130.10.10 158 322 1.6E-28 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMS64_05740 f31fd6c892733ed8b76b33da7d8c0b98 322 SUPERFAMILY SSF50998 36 321 3.06E-47 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMS64_05740 f31fd6c892733ed8b76b33da7d8c0b98 322 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 174 188 - T 11-10-2018 IPR019775 WD40 repeat, conserved site AMS64_05740 f31fd6c892733ed8b76b33da7d8c0b98 322 Gene3D G3DSA:2.130.10.10 20 157 9.8E-12 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMS64_05740 f31fd6c892733ed8b76b33da7d8c0b98 322 Pfam PF00400 WD domain, G-beta repeat 155 187 0.003 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AMS64_05740 f31fd6c892733ed8b76b33da7d8c0b98 322 SMART SM00320 107 146 100.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AMS64_05740 f31fd6c892733ed8b76b33da7d8c0b98 322 SMART SM00320 21 60 20.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AMS64_05740 f31fd6c892733ed8b76b33da7d8c0b98 322 SMART SM00320 282 320 11.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AMS64_05740 f31fd6c892733ed8b76b33da7d8c0b98 322 SMART SM00320 190 227 5.1 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AMS64_05740 f31fd6c892733ed8b76b33da7d8c0b98 322 SMART SM00320 230 271 2.1 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AMS64_05740 f31fd6c892733ed8b76b33da7d8c0b98 322 SMART SM00320 149 187 2.0E-4 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AMS64_08760 10f21d76bb6ec144fe6079b23a3ef6e8 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 101 184 3.6E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_08760 10f21d76bb6ec144fe6079b23a3ef6e8 219 Gene3D G3DSA:3.40.50.1000 82 219 1.2E-29 T 11-10-2018 IPR023214 HAD superfamily AMS64_08760 10f21d76bb6ec144fe6079b23a3ef6e8 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 178 3.6E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_08760 10f21d76bb6ec144fe6079b23a3ef6e8 219 Gene3D G3DSA:1.10.150.240 15 81 1.9E-25 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMS64_08760 10f21d76bb6ec144fe6079b23a3ef6e8 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 4.9E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_08760 10f21d76bb6ec144fe6079b23a3ef6e8 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 4.9E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_08760 10f21d76bb6ec144fe6079b23a3ef6e8 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 4.9E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_08760 10f21d76bb6ec144fe6079b23a3ef6e8 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 4.9E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_08760 10f21d76bb6ec144fe6079b23a3ef6e8 219 SUPERFAMILY SSF56784 2 209 4.8E-51 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_08760 10f21d76bb6ec144fe6079b23a3ef6e8 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 2.9E-25 T 11-10-2018 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 PRINTS PR00046 Major sigma-70 factor signature 138 146 3.4E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 PRINTS PR00046 Major sigma-70 factor signature 283 298 3.4E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 PRINTS PR00046 Major sigma-70 factor signature 114 127 3.4E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 PRINTS PR00046 Major sigma-70 factor signature 262 274 3.4E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 PRINTS PR00046 Major sigma-70 factor signature 298 309 3.4E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 Pfam PF04545 Sigma-70, region 4 258 311 1.0E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 2 324 39.544 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 SUPERFAMILY SSF88659 220 318 2.24E-23 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 Pfam PF04539 Sigma-70 region 3 170 243 1.6E-18 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 Gene3D G3DSA:1.10.10.10 245 322 1.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 48 324 1.3E-139 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 Gene3D G3DSA:1.10.10.10 163 238 2.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 SUPERFAMILY SSF88659 163 237 3.66E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 114 127 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 Pfam PF00140 Sigma-70 factor, region 1.2 52 85 1.2E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 86 313 3.6E-35 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 SUPERFAMILY SSF88946 52 160 9.03E-46 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 Gene3D G3DSA:1.10.601.10 3 159 1.0E-47 T 11-10-2018 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 Pfam PF04542 Sigma-70 region 2 90 159 1.4E-20 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_05145 bcdb9c1968dde638b2993e77978543cb 327 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 283 309 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMS64_01810 900e10beb55efdd97da9a7160d2fc1ae 290 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 23 281 1.1E-86 T 11-10-2018 IPR017039 Virulence factor BrkB AMS64_01810 900e10beb55efdd97da9a7160d2fc1ae 290 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 13 288 24.346 T 11-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AMS64_01810 900e10beb55efdd97da9a7160d2fc1ae 290 Pfam PF03631 Virulence factor BrkB 32 278 7.2E-58 T 11-10-2018 IPR017039 Virulence factor BrkB AMS64_01810 900e10beb55efdd97da9a7160d2fc1ae 290 PIRSF PIRSF035875 10 288 9.1E-60 T 11-10-2018 IPR017039 Virulence factor BrkB AMS64_18195 b480b818ae32fb4ec1c020a3f750139c 186 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 180 4.9E-55 T 11-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 AMS64_18195 b480b818ae32fb4ec1c020a3f750139c 186 Pfam PF01965 DJ-1/PfpI family 2 168 7.1E-38 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMS64_18195 b480b818ae32fb4ec1c020a3f750139c 186 SUPERFAMILY SSF52317 2 185 1.04E-43 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_18195 b480b818ae32fb4ec1c020a3f750139c 186 Gene3D G3DSA:3.40.50.880 1 186 1.8E-48 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_18630 3f71c8aa1bbd17707aab47033b853655 193 Pfam PF01713 Smr domain 95 175 3.7E-22 T 11-10-2018 IPR002625 Smr domain AMS64_18630 3f71c8aa1bbd17707aab47033b853655 193 SMART SM00463 92 175 8.5E-15 T 11-10-2018 IPR002625 Smr domain AMS64_18630 3f71c8aa1bbd17707aab47033b853655 193 SUPERFAMILY SSF160443 93 175 1.26E-15 T 11-10-2018 IPR036063 Smr domain superfamily AMS64_18630 3f71c8aa1bbd17707aab47033b853655 193 Gene3D G3DSA:3.30.1370.110 45 181 2.7E-44 T 11-10-2018 AMS64_04835 5eec3d6c33b3ffeb6822ea6b87d64b38 285 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.239 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AMS64_04835 5eec3d6c33b3ffeb6822ea6b87d64b38 285 Gene3D G3DSA:3.30.1300.10 180 283 4.8E-30 T 11-10-2018 AMS64_04835 5eec3d6c33b3ffeb6822ea6b87d64b38 285 Pfam PF02569 Pantoate-beta-alanine ligase 5 278 7.3E-103 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AMS64_04835 5eec3d6c33b3ffeb6822ea6b87d64b38 285 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 280 6.7E-108 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AMS64_04835 5eec3d6c33b3ffeb6822ea6b87d64b38 285 Gene3D G3DSA:3.40.50.620 1 179 7.8E-81 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_04835 5eec3d6c33b3ffeb6822ea6b87d64b38 285 SUPERFAMILY SSF52374 1 283 2.2E-106 T 11-10-2018 AMS64_04835 5eec3d6c33b3ffeb6822ea6b87d64b38 285 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 82 5.3E-10 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 SUPERFAMILY SSF56925 22 182 3.66E-24 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01021 OMPA domain signature 252 267 1.8E-19 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01021 OMPA domain signature 267 283 1.8E-19 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01021 OMPA domain signature 220 242 1.8E-19 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 Gene3D G3DSA:2.40.160.20 21 182 3.2E-28 T 11-10-2018 AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 Gene3D G3DSA:3.30.1330.60 196 339 1.0E-47 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 ProSitePatterns PS01068 OmpA-like domain. 254 298 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 SUPERFAMILY SSF103088 209 331 4.45E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 Pfam PF01389 OmpA-like transmembrane domain 22 186 4.8E-46 T 11-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01022 Outer membrane protein A signature 208 223 7.6E-17 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01022 Outer membrane protein A signature 310 323 7.6E-17 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01022 Outer membrane protein A signature 237 256 7.6E-17 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01022 Outer membrane protein A signature 276 295 7.6E-17 T 11-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AMS64_17410 c29bc00bfa17ea7c6eefc1845048f710 339 Pfam PF00691 OmpA family 219 310 5.6E-18 T 11-10-2018 IPR006665 OmpA-like domain AMS64_15985 551fddec04fa32a115d4cf75ee9ba7e1 112 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 9.7E-26 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AMS64_15985 551fddec04fa32a115d4cf75ee9ba7e1 112 SUPERFAMILY SSF69754 2 106 2.09E-28 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMS64_15985 551fddec04fa32a115d4cf75ee9ba7e1 112 Gene3D G3DSA:3.30.160.100 1 106 6.0E-33 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMS64_15985 551fddec04fa32a115d4cf75ee9ba7e1 112 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.3E-20 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AMS64_08990 cae56b17bff1f00bf6d5136bc8a984ad 442 SUPERFAMILY SSF51338 2 435 2.57E-26 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_08990 cae56b17bff1f00bf6d5136bc8a984ad 442 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 2 438 1.9E-219 T 11-10-2018 IPR017700 Putative aminohydrolase SsnA AMS64_08990 cae56b17bff1f00bf6d5136bc8a984ad 442 Gene3D G3DSA:3.20.20.140 57 361 2.1E-76 T 11-10-2018 AMS64_08990 cae56b17bff1f00bf6d5136bc8a984ad 442 SUPERFAMILY SSF51556 56 338 1.32E-53 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_08990 cae56b17bff1f00bf6d5136bc8a984ad 442 Pfam PF01979 Amidohydrolase family 53 410 5.5E-43 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMS64_08990 cae56b17bff1f00bf6d5136bc8a984ad 442 Gene3D G3DSA:2.30.40.10 5 424 2.1E-76 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 4 581 0.0 T 11-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 Gene3D G3DSA:3.90.700.10 237 363 5.5E-160 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 580 4.7E-236 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 580 3.4E-39 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 Pfam PF00890 FAD binding domain 7 397 6.2E-112 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.9E-9 T 11-10-2018 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.9E-9 T 11-10-2018 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 SUPERFAMILY SSF56425 227 358 6.28E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 Gene3D G3DSA:3.50.50.60 7 409 5.5E-160 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 SUPERFAMILY SSF46977 444 587 1.57E-46 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 Gene3D G3DSA:1.20.58.100 423 539 1.7E-33 T 11-10-2018 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 Gene3D G3DSA:4.10.80.40 542 576 1.0E-16 T 11-10-2018 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 PIRSF PIRSF000171 1 577 1.1E-44 T 11-10-2018 AMS64_06505 2fe26535b3ce71811fd8775d61db41f3 594 SUPERFAMILY SSF51905 4 420 1.02E-74 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_13620 9bd7b40d909a439669a869a02dbc5680 332 Pfam PF01076 Plasmid recombination enzyme 63 174 2.6E-10 T 11-10-2018 IPR001668 Plasmid recombination enzyme GO:0003677|GO:0005727|GO:0006310 AMS64_13620 9bd7b40d909a439669a869a02dbc5680 332 Gene3D G3DSA:3.30.930.30 6 185 1.9E-19 T 11-10-2018 AMS64_16685 380c913dfbad96d77bb04103ce245928 551 SUPERFAMILY SSF52540 155 545 4.39E-98 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_16685 380c913dfbad96d77bb04103ce245928 551 Gene3D G3DSA:3.40.50.300 276 547 5.8E-106 T 11-10-2018 AMS64_16685 380c913dfbad96d77bb04103ce245928 551 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 367 381 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_16685 380c913dfbad96d77bb04103ce245928 551 SMART SM00382 300 421 4.3E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_16685 380c913dfbad96d77bb04103ce245928 551 Pfam PF00437 Type II/IV secretion system protein 175 439 5.2E-77 T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_16685 380c913dfbad96d77bb04103ce245928 551 SUPERFAMILY SSF160246 1 140 1.31E-23 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AMS64_16685 380c913dfbad96d77bb04103ce245928 551 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 36 144 4.4E-15 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal AMS64_16685 380c913dfbad96d77bb04103ce245928 551 Gene3D G3DSA:3.30.450.90 137 271 2.8E-44 T 11-10-2018 AMS64_07065 43fc6cf6af31c5fd490bb60262e4a1cc 282 Gene3D G3DSA:3.20.20.150 4 275 1.4E-84 T 11-10-2018 AMS64_07065 43fc6cf6af31c5fd490bb60262e4a1cc 282 Pfam PF05114 Protein of unknown function (DUF692) 5 267 3.0E-99 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 AMS64_13710 c3dd6cb937cdf13df6614d10025c05d5 208 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 5 207 4.0E-76 T 11-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 AMS64_13710 c3dd6cb937cdf13df6614d10025c05d5 208 Pfam PF06578 YOP proteins translocation protein K (YscK) 5 208 3.6E-68 T 11-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 AMS64_07845 c3dd6cb937cdf13df6614d10025c05d5 208 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 5 207 4.0E-76 T 11-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 AMS64_07845 c3dd6cb937cdf13df6614d10025c05d5 208 Pfam PF06578 YOP proteins translocation protein K (YscK) 5 208 3.6E-68 T 11-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 AMS64_05595 1dce6e079233c08540b8fa7d6f97e87f 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 10 52 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_05595 1dce6e079233c08540b8fa7d6f97e87f 297 Pfam PF13280 WYL domain 134 288 2.8E-15 T 11-10-2018 IPR026881 WYL domain AMS64_15945 76b176fb886a963e699f0997435768a9 310 Pfam PF00550 Phosphopantetheine attachment site 232 279 1.0E-5 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMS64_15945 76b176fb886a963e699f0997435768a9 310 Gene3D G3DSA:3.40.50.850 1 208 6.1E-74 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMS64_15945 76b176fb886a963e699f0997435768a9 310 Gene3D G3DSA:1.10.1200.10 212 289 5.3E-24 T 11-10-2018 IPR036736 ACP-like superfamily AMS64_15945 76b176fb886a963e699f0997435768a9 310 PRINTS PR01398 Isochorismatase signature 80 99 3.3E-43 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AMS64_15945 76b176fb886a963e699f0997435768a9 310 PRINTS PR01398 Isochorismatase signature 2 14 3.3E-43 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AMS64_15945 76b176fb886a963e699f0997435768a9 310 PRINTS PR01398 Isochorismatase signature 168 186 3.3E-43 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AMS64_15945 76b176fb886a963e699f0997435768a9 310 PRINTS PR01398 Isochorismatase signature 63 80 3.3E-43 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AMS64_15945 76b176fb886a963e699f0997435768a9 310 PRINTS PR01398 Isochorismatase signature 112 134 3.3E-43 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AMS64_15945 76b176fb886a963e699f0997435768a9 310 PRINTS PR01398 Isochorismatase signature 186 203 3.3E-43 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AMS64_15945 76b176fb886a963e699f0997435768a9 310 SUPERFAMILY SSF52499 1 217 3.79E-64 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMS64_15945 76b176fb886a963e699f0997435768a9 310 Pfam PF00857 Isochorismatase family 32 205 2.1E-36 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AMS64_15945 76b176fb886a963e699f0997435768a9 310 SUPERFAMILY SSF47336 214 290 4.58E-8 T 11-10-2018 IPR036736 ACP-like superfamily AMS64_15945 76b176fb886a963e699f0997435768a9 310 PIRSF PIRSF001111 1 292 1.7E-121 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 SUPERFAMILY SSF55957 434 544 1.83E-19 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 SUPERFAMILY SSF53738 210 318 3.77E-10 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 SUPERFAMILY SSF53738 306 448 1.22E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 491 536 1.1E-7 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 Gene3D G3DSA:3.30.310.50 444 547 6.4E-33 T 11-10-2018 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 438 1.9E-27 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 3.3E-285 T 11-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 211 318 1.0E-17 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 182 1.1E-36 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 SUPERFAMILY SSF53738 26 236 2.16E-49 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 Gene3D G3DSA:3.40.120.10 222 319 2.2E-46 T 11-10-2018 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 Gene3D G3DSA:3.40.120.10 320 443 1.9E-34 T 11-10-2018 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 Gene3D G3DSA:3.40.120.10 17 221 4.6E-73 T 11-10-2018 AMS64_16065 86e364ecefee0f12d3afa3eff8b2439b 549 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 141 150 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMS64_09170 ce630a7d43b7a8fae125470b5a28115e 397 SUPERFAMILY SSF88697 4 72 4.75E-17 T 11-10-2018 IPR015947 PUA-like superfamily AMS64_09170 ce630a7d43b7a8fae125470b5a28115e 397 SMART SM00359 3 88 7.3E-13 T 11-10-2018 IPR002478 PUA domain GO:0003723 AMS64_09170 ce630a7d43b7a8fae125470b5a28115e 397 Gene3D G3DSA:2.30.130.10 1 72 2.3E-28 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AMS64_09170 ce630a7d43b7a8fae125470b5a28115e 397 Gene3D G3DSA:3.40.50.150 182 396 7.7E-77 T 11-10-2018 AMS64_09170 ce630a7d43b7a8fae125470b5a28115e 397 SUPERFAMILY SSF53335 79 393 2.22E-78 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_09170 ce630a7d43b7a8fae125470b5a28115e 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 71.774 T 11-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 AMS64_09170 ce630a7d43b7a8fae125470b5a28115e 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 171 339 4.1E-31 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AMS64_09170 ce630a7d43b7a8fae125470b5a28115e 397 Gene3D G3DSA:3.30.750.80 73 181 8.5E-37 T 11-10-2018 AMS64_18120 6a58a7f19750c2375369f42c364f6ab5 182 Gene3D G3DSA:3.40.1580.20 1 180 1.4E-55 T 11-10-2018 IPR038228 Syd superfamily AMS64_18120 6a58a7f19750c2375369f42c364f6ab5 182 Pfam PF07348 Syd protein (SUKH-2) 7 178 8.7E-55 T 11-10-2018 IPR009948 Syd GO:0009898 AMS64_18120 6a58a7f19750c2375369f42c364f6ab5 182 Hamap MF_01104 Protein Syd [syd]. 3 181 31.817 T 11-10-2018 IPR009948 Syd GO:0009898 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 333 1.4E-137 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 Pfam PF12327 FtsZ family, C-terminal domain 222 316 9.6E-39 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 PRINTS PR00423 Cell division protein FtsZ signature 212 233 2.6E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.6E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 PRINTS PR00423 Cell division protein FtsZ signature 189 211 2.6E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.6E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 SMART SM00864 13 205 3.7E-111 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 SUPERFAMILY SSF52490 13 208 1.7E-69 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 355 38.306 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 5.9E-39 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 Gene3D G3DSA:3.40.50.1440 4 220 1.2E-80 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 SUPERFAMILY SSF55307 204 320 4.81E-43 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 SMART SM00865 207 325 5.4E-56 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 Gene3D G3DSA:3.30.1330.20 221 329 3.7E-36 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 AMS64_03270 e64e5c572eae13d346081a42dd03d19d 383 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMS64_21650 a9c11d9a800a4eecaa43946412a9280c 206 Gene3D G3DSA:1.10.10.60 2 52 1.7E-22 T 11-10-2018 AMS64_21650 a9c11d9a800a4eecaa43946412a9280c 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMS64_21650 a9c11d9a800a4eecaa43946412a9280c 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 1.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_21650 a9c11d9a800a4eecaa43946412a9280c 206 SUPERFAMILY SSF46689 4 77 2.54E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_21650 a9c11d9a800a4eecaa43946412a9280c 206 Gene3D G3DSA:1.10.357.10 53 202 2.6E-42 T 11-10-2018 AMS64_09010 23868329c4a6d72387ff91f24e33d03e 438 Pfam PF01979 Amidohydrolase family 72 434 7.0E-79 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMS64_09010 23868329c4a6d72387ff91f24e33d03e 438 SUPERFAMILY SSF51556 75 378 5.9E-103 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_09010 23868329c4a6d72387ff91f24e33d03e 438 Gene3D G3DSA:3.20.20.140 76 393 3.0E-194 T 11-10-2018 AMS64_09010 23868329c4a6d72387ff91f24e33d03e 438 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 33 431 1.1E-188 T 11-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 AMS64_09010 23868329c4a6d72387ff91f24e33d03e 438 SUPERFAMILY SSF51338 34 396 4.13E-10 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_09010 23868329c4a6d72387ff91f24e33d03e 438 Gene3D G3DSA:2.30.40.10 10 429 3.0E-194 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_19975 16027fcc7030199183a7340fa4a00508 532 Gene3D G3DSA:3.30.590.20 22 531 5.8E-190 T 11-10-2018 AMS64_19975 16027fcc7030199183a7340fa4a00508 532 Pfam PF04262 Glutamate-cysteine ligase 13 386 3.9E-168 T 11-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMS64_19975 16027fcc7030199183a7340fa4a00508 532 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 532 219.171 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMS64_19975 16027fcc7030199183a7340fa4a00508 532 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 20 524 1.8E-201 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMS64_19975 16027fcc7030199183a7340fa4a00508 532 SUPERFAMILY SSF55931 10 522 1.5E-195 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMS64_18315 b4fbc82c8bfb26b17de41f73a9722d3e 244 SUPERFAMILY SSF51735 3 233 3.38E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_18315 b4fbc82c8bfb26b17de41f73a9722d3e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 1.2E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_18315 b4fbc82c8bfb26b17de41f73a9722d3e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_18315 b4fbc82c8bfb26b17de41f73a9722d3e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 1.2E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_18315 b4fbc82c8bfb26b17de41f73a9722d3e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 1.2E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_18315 b4fbc82c8bfb26b17de41f73a9722d3e 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 127 155 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_18315 b4fbc82c8bfb26b17de41f73a9722d3e 244 Pfam PF00106 short chain dehydrogenase 5 180 1.0E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_18315 b4fbc82c8bfb26b17de41f73a9722d3e 244 Gene3D G3DSA:3.40.50.720 2 227 3.0E-46 T 11-10-2018 AMS64_20295 fdce58eef8f16b3c640c38c8479986a3 156 Pfam PF02082 Transcriptional regulator 1 83 2.9E-23 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AMS64_20295 fdce58eef8f16b3c640c38c8479986a3 156 SUPERFAMILY SSF46785 2 133 1.27E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_20295 fdce58eef8f16b3c640c38c8479986a3 156 Gene3D G3DSA:1.10.10.10 1 140 4.8E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_20295 fdce58eef8f16b3c640c38c8479986a3 156 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 2.1E-34 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AMS64_04670 ecc466dbd420eb402d6d2b5aee0753e1 151 SUPERFAMILY SSF141322 107 149 4.58E-5 T 11-10-2018 AMS64_04670 ecc466dbd420eb402d6d2b5aee0753e1 151 Gene3D G3DSA:2.40.50.140 83 151 5.7E-8 T 11-10-2018 AMS64_04670 ecc466dbd420eb402d6d2b5aee0753e1 151 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 150 3.0E-28 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain AMS64_13360 cd723c26047686283c2ff930b70e708d 186 Gene3D G3DSA:2.40.128.110 21 186 1.3E-53 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMS64_13360 cd723c26047686283c2ff930b70e708d 186 Pfam PF04264 YceI-like domain 23 180 4.2E-42 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMS64_13360 cd723c26047686283c2ff930b70e708d 186 SMART SM00867 22 184 5.7E-68 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMS64_13360 cd723c26047686283c2ff930b70e708d 186 SUPERFAMILY SSF101874 19 185 8.5E-56 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMS64_19685 9fab80e2a5a683eb989746edfd954a0e 520 Gene3D G3DSA:1.10.238.260 280 394 1.1E-30 T 11-10-2018 AMS64_19685 9fab80e2a5a683eb989746edfd954a0e 520 SUPERFAMILY SSF51569 1 291 3.11E-97 T 11-10-2018 AMS64_19685 9fab80e2a5a683eb989746edfd954a0e 520 SMART SM00917 369 500 7.5E-35 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMS64_19685 9fab80e2a5a683eb989746edfd954a0e 520 SUPERFAMILY SSF110921 392 499 6.28E-23 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMS64_19685 9fab80e2a5a683eb989746edfd954a0e 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 3.0E-238 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMS64_19685 9fab80e2a5a683eb989746edfd954a0e 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 3.7E-34 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMS64_19685 9fab80e2a5a683eb989746edfd954a0e 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.471 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMS64_19685 9fab80e2a5a683eb989746edfd954a0e 520 Gene3D G3DSA:3.20.20.70 1 277 2.2E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_19685 9fab80e2a5a683eb989746edfd954a0e 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMS64_19685 9fab80e2a5a683eb989746edfd954a0e 520 Gene3D G3DSA:3.30.160.270 396 501 4.3E-9 T 11-10-2018 AMS64_19685 9fab80e2a5a683eb989746edfd954a0e 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMS64_19685 9fab80e2a5a683eb989746edfd954a0e 520 Pfam PF00682 HMGL-like 4 273 1.5E-95 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 104 4.7E-34 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 SMART SM00846 2 154 7.1E-84 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 SUPERFAMILY SSF55347 154 316 4.76E-59 T 11-10-2018 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 315 1.6E-55 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 SUPERFAMILY SSF51735 2 176 1.73E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 327 1.0E-166 T 11-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 336 66.524 T 11-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 Gene3D G3DSA:3.40.50.720 3 327 5.7E-131 T 11-10-2018 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 5.7E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 5.7E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 5.7E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 5.7E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 5.7E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 Gene3D G3DSA:3.30.360.10 153 317 5.7E-131 T 11-10-2018 AMS64_05375 79ebb503bed2fd66f09733015f8180ef 336 PIRSF PIRSF000149 1 336 1.2E-134 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_22210 41f51db6099aa8062a75f358cce75a9d 290 SUPERFAMILY SSF53850 88 288 2.78E-29 T 11-10-2018 AMS64_22210 41f51db6099aa8062a75f358cce75a9d 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 61 5.6E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_22210 41f51db6099aa8062a75f358cce75a9d 290 SUPERFAMILY SSF46785 2 109 9.28E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_22210 41f51db6099aa8062a75f358cce75a9d 290 Gene3D G3DSA:1.10.10.10 2 83 1.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_22210 41f51db6099aa8062a75f358cce75a9d 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_22210 41f51db6099aa8062a75f358cce75a9d 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_22210 41f51db6099aa8062a75f358cce75a9d 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_22210 41f51db6099aa8062a75f358cce75a9d 290 Pfam PF03466 LysR substrate binding domain 87 287 7.9E-29 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_22210 41f51db6099aa8062a75f358cce75a9d 290 Gene3D G3DSA:3.40.190.10 90 274 2.5E-21 T 11-10-2018 AMS64_22210 41f51db6099aa8062a75f358cce75a9d 290 Gene3D G3DSA:3.40.190.10 162 261 2.5E-21 T 11-10-2018 AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 PRINTS PR00338 Transcription termination factor NUSG signature 63 75 6.8E-21 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 PRINTS PR00338 Transcription termination factor NUSG signature 141 156 6.8E-21 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 PRINTS PR00338 Transcription termination factor NUSG signature 159 175 6.8E-21 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 11 182 1.9E-69 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 SMART SM00738 8 117 3.2E-49 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 SUPERFAMILY SSF50104 127 182 6.52E-19 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 Gene3D G3DSA:3.30.70.940 3 125 2.1E-47 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 Pfam PF00467 KOW motif 132 162 4.5E-8 T 11-10-2018 IPR005824 KOW AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 Gene3D G3DSA:2.30.30.30 126 182 3.6E-26 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 SUPERFAMILY SSF82679 9 119 2.09E-40 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 Pfam PF02357 Transcription termination factor nusG 9 114 2.8E-26 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 SMART SM00739 129 156 2.8E-6 T 11-10-2018 IPR005824 KOW AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 ProSitePatterns PS01014 Transcription termination factor nusG signature. 166 175 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AMS64_21765 418e79c3b41aea463cf2e2f884b7b357 183 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 8 183 25.202 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMS64_08400 582acd1a3d3a51e35e16719e60d1ec21 403 Pfam PF00480 ROK family 87 357 1.7E-42 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMS64_08400 582acd1a3d3a51e35e16719e60d1ec21 403 Gene3D G3DSA:3.30.420.40 89 374 3.5E-66 T 11-10-2018 AMS64_08400 582acd1a3d3a51e35e16719e60d1ec21 403 SUPERFAMILY SSF53067 85 374 1.86E-42 T 11-10-2018 AMS64_08400 582acd1a3d3a51e35e16719e60d1ec21 403 Gene3D G3DSA:1.10.10.10 3 80 1.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_08400 582acd1a3d3a51e35e16719e60d1ec21 403 Gene3D G3DSA:3.30.420.40 204 371 3.5E-66 T 11-10-2018 AMS64_08400 582acd1a3d3a51e35e16719e60d1ec21 403 SUPERFAMILY SSF46785 11 75 4.49E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_21865 d082a8e7067129758ee1d968aefdbe1c 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 430 6.4E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_21865 d082a8e7067129758ee1d968aefdbe1c 449 SMART SM00387 339 445 9.9E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_21865 d082a8e7067129758ee1d968aefdbe1c 449 SUPERFAMILY SSF55874 309 443 2.23E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_21865 d082a8e7067129758ee1d968aefdbe1c 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 6.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_21865 d082a8e7067129758ee1d968aefdbe1c 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 6.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_21865 d082a8e7067129758ee1d968aefdbe1c 449 Gene3D G3DSA:3.30.565.10 304 447 1.1E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_21865 d082a8e7067129758ee1d968aefdbe1c 449 Gene3D G3DSA:1.10.287.130 189 289 7.6E-7 T 11-10-2018 AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 SUPERFAMILY SSF52058 10 188 1.13E-34 T 11-10-2018 AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 Gene3D G3DSA:1.10.510.10 194 455 5.3E-17 T 11-10-2018 AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 327 400 1.2E-8 T 11-10-2018 AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 SUPERFAMILY SSF56112 208 448 7.93E-22 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 Gene3D G3DSA:3.80.10.10 101 193 8.3E-20 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 SMART SM00369 102 126 44.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 SMART SM00369 58 81 83.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 SMART SM00369 34 57 24.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 SMART SM00369 128 149 43.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 SMART SM00364 126 145 140.0 T 11-10-2018 AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 SMART SM00364 35 54 56.0 T 11-10-2018 AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 SMART SM00364 103 122 37.0 T 11-10-2018 AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 SMART SM00364 149 168 390.0 T 11-10-2018 AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 SMART SM00364 58 77 130.0 T 11-10-2018 AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 Gene3D G3DSA:3.80.10.10 3 100 7.5E-15 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily AMS64_10930 70fe46b6769d983b4605d8a3d53cefb4 456 Pfam PF13855 Leucine rich repeat 105 162 2.0E-7 T 11-10-2018 IPR001611 Leucine-rich repeat GO:0005515 AMS64_15450 5339ad2098ceea56ba8f3d418d00eefb 339 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 19 249 2.3E-64 T 11-10-2018 IPR018642 Protein of unknown function DUF2066 AMS64_07490 f1d0a5a2a6f39b86ef05d1a3332e686a 334 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 312 8.6E-78 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMS64_07490 f1d0a5a2a6f39b86ef05d1a3332e686a 334 SUPERFAMILY SSF53686 11 321 9.95E-92 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMS64_07490 f1d0a5a2a6f39b86ef05d1a3332e686a 334 Gene3D G3DSA:3.40.50.1100 57 153 2.2E-124 T 11-10-2018 AMS64_07490 f1d0a5a2a6f39b86ef05d1a3332e686a 334 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 33 330 4.3E-117 T 11-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AMS64_07490 f1d0a5a2a6f39b86ef05d1a3332e686a 334 Gene3D G3DSA:3.40.50.1100 14 317 2.2E-124 T 11-10-2018 AMS64_07490 f1d0a5a2a6f39b86ef05d1a3332e686a 334 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMS64_06015 70a3456c63653e192a64e3d163db0fc6 237 Gene3D G3DSA:3.40.50.150 28 237 3.7E-74 T 11-10-2018 AMS64_06015 70a3456c63653e192a64e3d163db0fc6 237 Pfam PF02390 Putative methyltransferase 62 231 1.6E-62 T 11-10-2018 AMS64_06015 70a3456c63653e192a64e3d163db0fc6 237 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 53 236 2.1E-68 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AMS64_06015 70a3456c63653e192a64e3d163db0fc6 237 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 22 236 30.726 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AMS64_06015 70a3456c63653e192a64e3d163db0fc6 237 SUPERFAMILY SSF53335 14 235 1.74E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_08650 24ee862ebc6598aae55d9d4fc38935d1 185 PIRSF PIRSF011484 1 180 1.8E-70 T 11-10-2018 IPR009822 YaeQ AMS64_08650 24ee862ebc6598aae55d9d4fc38935d1 185 SMART SM01322 1 176 1.1E-120 T 11-10-2018 IPR009822 YaeQ AMS64_08650 24ee862ebc6598aae55d9d4fc38935d1 185 Gene3D G3DSA:3.10.640.10 1 181 2.6E-79 T 11-10-2018 IPR038590 YaeQ superfamily AMS64_08650 24ee862ebc6598aae55d9d4fc38935d1 185 Pfam PF07152 YaeQ protein 1 172 4.1E-76 T 11-10-2018 IPR009822 YaeQ AMS64_08650 24ee862ebc6598aae55d9d4fc38935d1 185 SUPERFAMILY SSF52980 2 178 1.8E-72 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMS64_11785 7ac92cbca768e24c0fae79451083b989 714 SMART SM00382 501 687 2.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_11785 7ac92cbca768e24c0fae79451083b989 714 Gene3D G3DSA:1.20.1560.10 148 460 1.9E-53 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_11785 7ac92cbca768e24c0fae79451083b989 714 Gene3D G3DSA:3.40.50.300 468 712 3.4E-77 T 11-10-2018 AMS64_11785 7ac92cbca768e24c0fae79451083b989 714 SUPERFAMILY SSF90123 148 458 1.44E-49 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_11785 7ac92cbca768e24c0fae79451083b989 714 Pfam PF00005 ABC transporter 492 641 2.3E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_11785 7ac92cbca768e24c0fae79451083b989 714 Pfam PF00664 ABC transporter transmembrane region 164 423 1.3E-19 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMS64_11785 7ac92cbca768e24c0fae79451083b989 714 Gene3D G3DSA:3.90.70.10 5 132 6.1E-36 T 11-10-2018 AMS64_11785 7ac92cbca768e24c0fae79451083b989 714 SUPERFAMILY SSF52540 464 699 5.21E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11785 7ac92cbca768e24c0fae79451083b989 714 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 9 704 2.5E-304 T 11-10-2018 IPR017750 ATPase, type I secretion system AMS64_10640 550facce4dd2b2eb9b814224d6a1f1d9 215 Pfam PF08722 TnsA endonuclease N terminal 44 119 5.1E-6 T 11-10-2018 IPR014833 TnsA endonuclease, N-terminal AMS64_19890 e19fecc31980f049318aa8515e012cf6 349 SUPERFAMILY SSF51735 3 196 9.85E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_19890 e19fecc31980f049318aa8515e012cf6 349 Gene3D G3DSA:3.30.360.10 126 326 1.7E-130 T 11-10-2018 AMS64_19890 e19fecc31980f049318aa8515e012cf6 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 119 1.5E-23 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMS64_19890 e19fecc31980f049318aa8515e012cf6 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 240 2.9E-12 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AMS64_19890 e19fecc31980f049318aa8515e012cf6 349 Gene3D G3DSA:3.40.50.720 6 315 1.7E-130 T 11-10-2018 AMS64_01160 a067cf5604781a445e502ad5c44e6079 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 21.105 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01160 a067cf5604781a445e502ad5c44e6079 78 Pfam PF00830 Ribosomal L28 family 3 61 9.4E-26 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01160 a067cf5604781a445e502ad5c44e6079 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.0E-28 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01160 a067cf5604781a445e502ad5c44e6079 78 SUPERFAMILY SSF143800 2 77 3.34E-29 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01160 a067cf5604781a445e502ad5c44e6079 78 Gene3D G3DSA:2.30.170.40 2 78 3.2E-31 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_15350 d20014a9e58262d959484cefb152a27f 444 SUPERFAMILY SSF103473 16 438 3.92E-76 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_15350 d20014a9e58262d959484cefb152a27f 444 Pfam PF07690 Major Facilitator Superfamily 36 396 3.8E-45 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_15350 d20014a9e58262d959484cefb152a27f 444 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 5.2E-142 T 11-10-2018 AMS64_15350 d20014a9e58262d959484cefb152a27f 444 Gene3D G3DSA:1.20.1250.20 238 437 3.6E-43 T 11-10-2018 AMS64_15350 d20014a9e58262d959484cefb152a27f 444 PIRSF PIRSF002808 7 442 4.1E-144 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AMS64_15350 d20014a9e58262d959484cefb152a27f 444 Gene3D G3DSA:1.20.1250.20 19 223 3.1E-49 T 11-10-2018 AMS64_06085 767d965abd5b8db0910d37bbd3936be0 268 Pfam PF02567 Phenazine biosynthesis-like protein 9 259 1.7E-55 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMS64_06085 767d965abd5b8db0910d37bbd3936be0 268 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 239 1.5E-33 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMS64_06085 767d965abd5b8db0910d37bbd3936be0 268 PIRSF PIRSF016184 1 264 1.1E-53 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMS64_06085 767d965abd5b8db0910d37bbd3936be0 268 Gene3D G3DSA:3.10.310.10 7 254 1.5E-88 T 11-10-2018 AMS64_06085 767d965abd5b8db0910d37bbd3936be0 268 Gene3D G3DSA:3.10.310.10 119 252 1.5E-88 T 11-10-2018 AMS64_06085 767d965abd5b8db0910d37bbd3936be0 268 SUPERFAMILY SSF54506 4 264 5.06E-74 T 11-10-2018 AMS64_08250 13d95fd0a5790765f5e24b24652ed67c 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 103 1.0E-6 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08250 13d95fd0a5790765f5e24b24652ed67c 114 SUPERFAMILY SSF81343 5 114 1.7E-27 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08250 13d95fd0a5790765f5e24b24652ed67c 114 Gene3D G3DSA:1.20.1300.10 1 114 5.8E-29 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08250 13d95fd0a5790765f5e24b24652ed67c 114 PIRSF PIRSF000169 1 114 2.2E-38 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AMS64_08250 13d95fd0a5790765f5e24b24652ed67c 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 1.0E-33 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AMS64_05795 0fa16bf14a11c5b61f55522e1821b0b5 139 Gene3D G3DSA:2.60.120.460 3 139 6.4E-39 T 11-10-2018 IPR035917 YjbQ-like superfamily AMS64_05795 0fa16bf14a11c5b61f55522e1821b0b5 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 8 139 3.3E-40 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AMS64_05795 0fa16bf14a11c5b61f55522e1821b0b5 139 Pfam PF01894 Uncharacterised protein family UPF0047 29 135 1.7E-35 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AMS64_05795 0fa16bf14a11c5b61f55522e1821b0b5 139 PIRSF PIRSF004681 1 139 2.5E-43 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AMS64_05795 0fa16bf14a11c5b61f55522e1821b0b5 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AMS64_05795 0fa16bf14a11c5b61f55522e1821b0b5 139 SUPERFAMILY SSF111038 1 139 9.55E-46 T 11-10-2018 IPR035917 YjbQ-like superfamily AMS64_16620 d517ef54a82ede4c1374e521b8eefaf6 438 SUPERFAMILY SSF52540 46 239 2.5E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_16620 d517ef54a82ede4c1374e521b8eefaf6 438 SMART SM00382 62 234 3.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_16620 d517ef54a82ede4c1374e521b8eefaf6 438 Pfam PF00005 ABC transporter 54 185 4.9E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_16620 d517ef54a82ede4c1374e521b8eefaf6 438 Pfam PF14524 Wzt C-terminal domain 294 430 1.5E-12 T 11-10-2018 IPR029439 Wzt, C-terminal AMS64_16620 d517ef54a82ede4c1374e521b8eefaf6 438 Gene3D G3DSA:2.70.50.60 276 438 4.3E-60 T 11-10-2018 AMS64_16620 d517ef54a82ede4c1374e521b8eefaf6 438 Gene3D G3DSA:3.40.50.300 41 265 5.7E-43 T 11-10-2018 AMS64_03405 8692d357bcd2e4bb96fa789954a5909f 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 264 1.2E-16 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMS64_03405 8692d357bcd2e4bb96fa789954a5909f 366 Gene3D G3DSA:2.40.30.170 42 274 3.8E-49 T 11-10-2018 AMS64_03405 8692d357bcd2e4bb96fa789954a5909f 366 Gene3D G3DSA:2.40.50.100 55 201 3.8E-49 T 11-10-2018 AMS64_03405 8692d357bcd2e4bb96fa789954a5909f 366 SUPERFAMILY SSF111369 45 267 2.48E-19 T 11-10-2018 AMS64_03405 8692d357bcd2e4bb96fa789954a5909f 366 Gene3D G3DSA:1.10.287.470 89 162 3.8E-49 T 11-10-2018 AMS64_03405 8692d357bcd2e4bb96fa789954a5909f 366 Gene3D G3DSA:2.40.420.20 275 349 3.8E-49 T 11-10-2018 AMS64_03405 8692d357bcd2e4bb96fa789954a5909f 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 350 6.3E-53 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_09930 37e3a9fe33ae49935e42992a3e383007 202 SUPERFAMILY SSF53254 1 184 3.21E-47 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AMS64_09930 37e3a9fe33ae49935e42992a3e383007 202 Gene3D G3DSA:3.40.50.1240 1 192 1.1E-47 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AMS64_09930 37e3a9fe33ae49935e42992a3e383007 202 SMART SM00855 2 158 5.3E-12 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMS64_09930 37e3a9fe33ae49935e42992a3e383007 202 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 182 5.5E-44 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMS64_09930 37e3a9fe33ae49935e42992a3e383007 202 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 AMS64_09930 37e3a9fe33ae49935e42992a3e383007 202 PIRSF PIRSF000709 2 164 1.8E-13 T 11-10-2018 AMS64_02975 48bd85891235ae21a826229ff99ac254 516 Pfam PF11646 Protein of unknown function DUF3258 196 290 3.2E-6 T 11-10-2018 IPR021672 Protein of unknown function DUF3258 AMS64_02975 48bd85891235ae21a826229ff99ac254 516 SUPERFAMILY SSF56349 200 500 5.3E-27 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_02975 48bd85891235ae21a826229ff99ac254 516 Gene3D G3DSA:1.10.443.10 331 508 4.4E-19 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_02975 48bd85891235ae21a826229ff99ac254 516 Pfam PF00589 Phage integrase family 340 500 2.5E-10 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 PRINTS PR01607 Apyrase family signature 544 563 9.9E-26 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 PRINTS PR01607 Apyrase family signature 305 325 9.9E-26 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 PRINTS PR01607 Apyrase family signature 444 467 9.9E-26 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 PRINTS PR01607 Apyrase family signature 266 289 9.9E-26 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 PRINTS PR01607 Apyrase family signature 30 48 9.9E-26 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 PRINTS PR01607 Apyrase family signature 238 255 9.9E-26 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 ProSitePatterns PS00786 5'-nucleotidase signature 2. 121 132 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 SUPERFAMILY SSF55816 374 612 6.54E-38 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 Gene3D G3DSA:3.90.780.10 404 599 1.0E-53 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 SUPERFAMILY SSF56300 26 372 1.14E-76 T 11-10-2018 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 Pfam PF00149 Calcineurin-like phosphoesterase 33 283 1.2E-9 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 ProSitePatterns PS00785 5'-nucleotidase signature 1. 32 44 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 Gene3D G3DSA:3.60.21.10 24 372 1.9E-117 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMS64_01500 face12e7889be6443ef6d79c0cc04112 663 Pfam PF02872 5'-nucleotidase, C-terminal domain 376 567 6.6E-23 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_02295 2050b1b928ad7533e8b3577526b5ce72 282 Gene3D G3DSA:1.10.10.10 141 275 5.3E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_02295 2050b1b928ad7533e8b3577526b5ce72 282 SUPERFAMILY SSF46894 196 261 1.67E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_02295 2050b1b928ad7533e8b3577526b5ce72 282 SMART SM00421 201 258 1.3E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_02295 2050b1b928ad7533e8b3577526b5ce72 282 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 234 246 1.7E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_02295 2050b1b928ad7533e8b3577526b5ce72 282 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 218 234 1.7E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_02295 2050b1b928ad7533e8b3577526b5ce72 282 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 218 1.7E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_02295 2050b1b928ad7533e8b3577526b5ce72 282 ProSitePatterns PS00622 LuxR-type HTH domain signature. 218 245 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_02295 2050b1b928ad7533e8b3577526b5ce72 282 Pfam PF00196 Bacterial regulatory proteins, luxR family 203 257 3.9E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_05630 911c863faf68f5a7c0549eb337a1babf 241 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 240 1.4E-49 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain AMS64_05630 911c863faf68f5a7c0549eb337a1babf 241 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 111 127 - T 11-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 AMS64_05630 911c863faf68f5a7c0549eb337a1babf 241 Gene3D G3DSA:3.10.200.10 19 241 8.2E-79 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily AMS64_05630 911c863faf68f5a7c0549eb337a1babf 241 SMART SM01057 23 240 3.2E-101 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain AMS64_05630 911c863faf68f5a7c0549eb337a1babf 241 SUPERFAMILY SSF51069 21 240 2.88E-75 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 583 596 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 Gene3D G3DSA:3.40.50.300 409 598 3.3E-115 T 11-10-2018 AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 Gene3D G3DSA:2.160.10.10 122 278 4.2E-5 T 11-10-2018 AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 337 610 63.894 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 337 609 1.1E-112 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 Pfam PF00448 SRP54-type protein, GTPase domain 410 609 4.4E-76 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 SUPERFAMILY SSF51161 131 266 5.89E-7 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 SMART SM00963 314 394 7.4E-22 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 SMART SM00382 408 599 3.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 Pfam PF02881 SRP54-type protein, helical bundle domain 327 388 1.2E-10 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 SUPERFAMILY SSF52540 405 610 6.49E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 SUPERFAMILY SSF47364 309 387 4.45E-21 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 Gene3D G3DSA:1.20.120.140 311 608 3.3E-115 T 11-10-2018 AMS64_21510 db71c21ebb83b6e31d1efb40e022c5a9 613 SMART SM00962 409 610 4.6E-123 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMS64_13150 ec5ba181a22a35c6524f77f661a2e7ac 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 366 3.6E-76 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_13150 ec5ba181a22a35c6524f77f661a2e7ac 385 Gene3D G3DSA:2.40.420.20 278 370 2.4E-22 T 11-10-2018 AMS64_13150 ec5ba181a22a35c6524f77f661a2e7ac 385 Gene3D G3DSA:1.10.287.470 98 171 4.3E-64 T 11-10-2018 AMS64_13150 ec5ba181a22a35c6524f77f661a2e7ac 385 Gene3D G3DSA:2.40.50.100 63 207 4.3E-64 T 11-10-2018 AMS64_13150 ec5ba181a22a35c6524f77f661a2e7ac 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 287 5.5E-12 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMS64_13150 ec5ba181a22a35c6524f77f661a2e7ac 385 SUPERFAMILY SSF111369 52 292 4.58E-65 T 11-10-2018 AMS64_13150 ec5ba181a22a35c6524f77f661a2e7ac 385 Gene3D G3DSA:2.40.30.170 58 277 4.3E-64 T 11-10-2018 AMS64_03155 40770e100a58b48fc911d381351ea784 427 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 3 98 2.0E-20 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AMS64_03155 40770e100a58b48fc911d381351ea784 427 Pfam PF07196 Flagellin hook IN motif 118 174 5.8E-8 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AMS64_03155 40770e100a58b48fc911d381351ea784 427 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 206 424 7.8E-46 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 AMS64_20970 b9a7af8576588d8269911fa60c7b7b19 247 Gene3D G3DSA:3.40.190.10 103 207 7.1E-19 T 11-10-2018 AMS64_20970 b9a7af8576588d8269911fa60c7b7b19 247 Gene3D G3DSA:3.40.190.10 26 242 7.1E-19 T 11-10-2018 AMS64_20970 b9a7af8576588d8269911fa60c7b7b19 247 SMART SM00062 23 247 5.4E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_20970 b9a7af8576588d8269911fa60c7b7b19 247 SUPERFAMILY SSF53850 24 244 1.09E-27 T 11-10-2018 AMS64_20970 b9a7af8576588d8269911fa60c7b7b19 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 244 3.5E-15 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 SUPERFAMILY SSF55785 9 128 4.01E-19 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 SMART SM00267 255 427 4.3E-65 T 11-10-2018 IPR000160 GGDEF domain AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 SMART SM00091 142 208 0.012 T 11-10-2018 IPR000014 PAS domain AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 SMART SM00091 15 81 5.7E-7 T 11-10-2018 IPR000014 PAS domain AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 SUPERFAMILY SSF55785 127 253 1.65E-20 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 Gene3D G3DSA:3.30.450.20 139 262 5.5E-20 T 11-10-2018 AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 Gene3D G3DSA:3.30.450.20 7 138 1.3E-21 T 11-10-2018 AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 262 426 1.4E-48 T 11-10-2018 IPR000160 GGDEF domain AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 136 4.7E-15 T 11-10-2018 IPR000014 PAS domain AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 262 4.0E-7 T 11-10-2018 IPR000014 PAS domain AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 SUPERFAMILY SSF55073 271 426 1.1E-45 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 422 3.9E-44 T 11-10-2018 IPR000160 GGDEF domain AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 Pfam PF08448 PAS fold 150 257 9.4E-14 T 11-10-2018 IPR013656 PAS fold-4 AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 Pfam PF08448 PAS fold 22 130 2.8E-15 T 11-10-2018 IPR013656 PAS fold-4 AMS64_09060 aef1a12083b477418855dbc622cb64ef 429 Gene3D G3DSA:3.30.70.270 263 428 4.9E-52 T 11-10-2018 AMS64_15915 804fa8307aed8baffbca51ff420a6b88 366 SUPERFAMILY SSF47005 105 150 1.7E-9 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMS64_15915 804fa8307aed8baffbca51ff420a6b88 366 Pfam PF02817 e3 binding domain 112 146 2.7E-9 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AMS64_15915 804fa8307aed8baffbca51ff420a6b88 366 SUPERFAMILY SSF51230 3 87 1.19E-23 T 11-10-2018 IPR011053 Single hybrid motif AMS64_15915 804fa8307aed8baffbca51ff420a6b88 366 Gene3D G3DSA:4.10.320.10 110 146 1.3E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMS64_15915 804fa8307aed8baffbca51ff420a6b88 366 Gene3D G3DSA:2.40.50.100 1 83 1.8E-21 T 11-10-2018 AMS64_15915 804fa8307aed8baffbca51ff420a6b88 366 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 159 363 1.7E-48 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMS64_15915 804fa8307aed8baffbca51ff420a6b88 366 Gene3D G3DSA:3.30.559.10 147 365 7.0E-49 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMS64_15915 804fa8307aed8baffbca51ff420a6b88 366 SUPERFAMILY SSF52777 160 363 6.23E-52 T 11-10-2018 AMS64_15915 804fa8307aed8baffbca51ff420a6b88 366 Pfam PF00364 Biotin-requiring enzyme 4 74 7.9E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMS64_01785 7ab7bd67484033109c72ac4115a4594c 735 TIGRFAM TIGR00595 priA: primosomal protein N' 225 731 2.1E-181 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMS64_01785 7ab7bd67484033109c72ac4115a4594c 735 SUPERFAMILY SSF52540 222 604 1.46E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01785 7ab7bd67484033109c72ac4115a4594c 735 Hamap MF_00983 Probable primosomal protein N' [priA]. 12 734 24.531 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMS64_01785 7ab7bd67484033109c72ac4115a4594c 735 SMART SM00490 496 593 5.4E-10 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_01785 7ab7bd67484033109c72ac4115a4594c 735 Pfam PF00270 DEAD/DEAH box helicase 222 368 5.7E-12 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_01785 7ab7bd67484033109c72ac4115a4594c 735 Gene3D G3DSA:1.10.8.630 8 116 1.3E-33 T 11-10-2018 AMS64_01785 7ab7bd67484033109c72ac4115a4594c 735 Gene3D G3DSA:3.40.50.300 192 381 2.2E-75 T 11-10-2018 AMS64_01785 7ab7bd67484033109c72ac4115a4594c 735 Pfam PF00271 Helicase conserved C-terminal domain 524 592 4.0E-6 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_01785 7ab7bd67484033109c72ac4115a4594c 735 SMART SM00487 199 395 7.7E-17 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_19320 2cd3b6a09b392747d2f3618c48b38dd7 814 Gene3D G3DSA:2.60.450.10 57 201 3.8E-5 T 11-10-2018 AMS64_19320 2cd3b6a09b392747d2f3618c48b38dd7 814 Pfam PF03968 OstA-like protein 67 200 1.5E-13 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AMS64_19320 2cd3b6a09b392747d2f3618c48b38dd7 814 Pfam PF04453 Organic solvent tolerance protein 320 722 1.0E-78 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AMS64_19320 2cd3b6a09b392747d2f3618c48b38dd7 814 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 16 787 18.569 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AMS64_14460 211969012271cd9d55dcbef0eea551c6 252 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 216 2.0E-24 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMS64_09120 649a3816b05ef2c79959ad7fc99081e1 639 SMART SM00491 476 605 2.2E-44 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMS64_09120 649a3816b05ef2c79959ad7fc99081e1 639 Gene3D G3DSA:3.40.50.300 447 635 6.2E-38 T 11-10-2018 AMS64_09120 649a3816b05ef2c79959ad7fc99081e1 639 SUPERFAMILY SSF52540 35 597 7.71E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09120 649a3816b05ef2c79959ad7fc99081e1 639 Pfam PF13307 Helicase C-terminal domain 461 617 5.6E-37 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMS64_09120 649a3816b05ef2c79959ad7fc99081e1 639 Gene3D G3DSA:3.40.50.300 20 282 1.1E-46 T 11-10-2018 AMS64_09120 649a3816b05ef2c79959ad7fc99081e1 639 Pfam PF00270 DEAD/DEAH box helicase 32 82 1.1E-5 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_03565 35f66b9c440e2e9262fe33e2fbe1b173 163 SUPERFAMILY SSF142433 5 162 6.41E-57 T 11-10-2018 IPR036653 CinA-like, C-terminal AMS64_03565 35f66b9c440e2e9262fe33e2fbe1b173 163 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 159 3.6E-52 T 11-10-2018 IPR008136 CinA, C-terminal AMS64_03565 35f66b9c440e2e9262fe33e2fbe1b173 163 Gene3D G3DSA:3.90.950.20 1 163 4.2E-61 T 11-10-2018 IPR036653 CinA-like, C-terminal AMS64_03565 35f66b9c440e2e9262fe33e2fbe1b173 163 Pfam PF02464 Competence-damaged protein 9 161 1.2E-58 T 11-10-2018 IPR008136 CinA, C-terminal AMS64_05800 6f704e278702776f415ae846d7108920 245 Pfam PF03575 Peptidase family S51 3 203 4.1E-46 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AMS64_05800 6f704e278702776f415ae846d7108920 245 Gene3D G3DSA:3.40.50.880 1 233 1.5E-49 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_05800 6f704e278702776f415ae846d7108920 245 SUPERFAMILY SSF52317 1 202 2.1E-36 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_13455 924e81dfd1f3c210edf21b3584dbb30b 157 SUPERFAMILY SSF54690 9 155 3.79E-53 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMS64_13455 924e81dfd1f3c210edf21b3584dbb30b 157 Gene3D G3DSA:3.90.1170.40 6 155 1.0E-55 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMS64_13455 924e81dfd1f3c210edf21b3584dbb30b 157 Pfam PF02391 MoaE protein 13 125 2.2E-38 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMS64_14660 542901d555d33e8ef875d76fb7e32b52 206 PRINTS PR00127 Clp protease catalytic subunit P signature 103 122 1.4E-6 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMS64_14660 542901d555d33e8ef875d76fb7e32b52 206 PRINTS PR00127 Clp protease catalytic subunit P signature 53 73 1.4E-6 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMS64_14660 542901d555d33e8ef875d76fb7e32b52 206 PRINTS PR00127 Clp protease catalytic subunit P signature 167 186 1.4E-6 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMS64_14660 542901d555d33e8ef875d76fb7e32b52 206 Pfam PF00574 Clp protease 50 187 6.2E-14 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMS64_14660 542901d555d33e8ef875d76fb7e32b52 206 SUPERFAMILY SSF52096 17 187 9.94E-20 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_14660 542901d555d33e8ef875d76fb7e32b52 206 Gene3D G3DSA:3.90.226.10 10 193 1.8E-28 T 11-10-2018 AMS64_14230 d3a042d7f0d4ea8371c136c8fadcec6e 193 Pfam PF00265 Thymidine kinase 3 186 1.1E-50 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMS64_14230 d3a042d7f0d4ea8371c136c8fadcec6e 193 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 11-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMS64_14230 d3a042d7f0d4ea8371c136c8fadcec6e 193 Gene3D G3DSA:3.40.50.300 1 141 1.1E-25 T 11-10-2018 AMS64_14230 d3a042d7f0d4ea8371c136c8fadcec6e 193 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 33.257 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMS64_14230 d3a042d7f0d4ea8371c136c8fadcec6e 193 SUPERFAMILY SSF52540 1 141 9.46E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_14230 d3a042d7f0d4ea8371c136c8fadcec6e 193 Gene3D G3DSA:3.30.60.20 143 188 3.2E-8 T 11-10-2018 AMS64_14230 d3a042d7f0d4ea8371c136c8fadcec6e 193 PIRSF PIRSF035805 1 193 5.3E-55 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMS64_14230 d3a042d7f0d4ea8371c136c8fadcec6e 193 SUPERFAMILY SSF57716 142 189 3.52E-16 T 11-10-2018 AMS64_10125 f40b9a10f9d9d686f76b48548bc4ee9d 576 SUPERFAMILY SSF48452 368 446 8.95E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_10125 f40b9a10f9d9d686f76b48548bc4ee9d 576 Gene3D G3DSA:3.40.50.410 98 279 7.9E-23 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_10125 f40b9a10f9d9d686f76b48548bc4ee9d 576 Pfam PF13519 von Willebrand factor type A domain 102 207 2.8E-13 T 11-10-2018 IPR002035 von Willebrand factor, type A AMS64_10125 f40b9a10f9d9d686f76b48548bc4ee9d 576 SMART SM00327 99 274 1.4E-4 T 11-10-2018 IPR002035 von Willebrand factor, type A AMS64_10125 f40b9a10f9d9d686f76b48548bc4ee9d 576 SUPERFAMILY SSF53300 102 269 1.63E-15 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_00700 39ad0e20b33ddcddd69e1143be035c76 154 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 139 18.584 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AMS64_00700 39ad0e20b33ddcddd69e1143be035c76 154 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 7.8E-32 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AMS64_00700 39ad0e20b33ddcddd69e1143be035c76 154 Pfam PF02416 mttA/Hcf106 family 4 52 5.0E-7 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMS64_00700 39ad0e20b33ddcddd69e1143be035c76 154 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-28 T 11-10-2018 AMS64_00700 39ad0e20b33ddcddd69e1143be035c76 154 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-28 T 11-10-2018 AMS64_00700 39ad0e20b33ddcddd69e1143be035c76 154 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-28 T 11-10-2018 AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 2.0E-31 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 2.0E-31 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 2.0E-31 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 2.0E-31 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 Gene3D G3DSA:1.10.240.10 227 329 1.9E-34 T 11-10-2018 AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 420 43.57 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 Pfam PF00579 tRNA synthetases class I (W and Y) 32 327 7.7E-82 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 Gene3D G3DSA:3.10.290.10 330 421 4.2E-24 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 SUPERFAMILY SSF55174 326 420 2.36E-16 T 11-10-2018 AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 SUPERFAMILY SSF52374 5 327 8.04E-96 T 11-10-2018 AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 Gene3D G3DSA:3.40.50.620 2 226 2.4E-86 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_02290 965db55fdf2b89fe99fc4c2c25062e17 421 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 420 7.2E-120 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1401 18.889 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Gene3D G3DSA:1.10.1790.20 1162 1341 3.8E-63 T 11-10-2018 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Gene3D G3DSA:1.10.274.100 490 666 1.1E-36 T 11-10-2018 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 SMART SM00663 235 514 3.7E-183 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 2.1E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 394 8.7E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Gene3D G3DSA:2.40.50.100 975 1049 2.6E-27 T 11-10-2018 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Gene3D G3DSA:1.10.132.30 667 816 1.7E-65 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 6.6E-88 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1060 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Gene3D G3DSA:2.40.50.100 1178 1242 3.8E-63 T 11-10-2018 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Pfam PF05000 RNA polymerase Rpb1, domain 4 700 785 1.1E-18 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Gene3D G3DSA:1.10.40.90 374 416 6.3E-22 T 11-10-2018 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Pfam PF04998 RNA polymerase Rpb1, domain 5 792 1343 1.9E-77 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Gene3D G3DSA:1.10.150.390 1343 1404 4.2E-28 T 11-10-2018 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Gene3D G3DSA:2.40.50.100 1050 1153 2.0E-28 T 11-10-2018 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 SUPERFAMILY SSF64484 16 1391 0.0 T 11-10-2018 AMS64_21735 2040d891169813bd1065bf319d07b0f4 1434 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 670 2.2E-28 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMS64_19740 0ffa3d4633f5e4fcf597687a00a3cc95 715 Gene3D G3DSA:3.20.70.20 10 666 3.0E-159 T 11-10-2018 AMS64_19740 0ffa3d4633f5e4fcf597687a00a3cc95 715 SUPERFAMILY SSF51998 14 691 3.97E-168 T 11-10-2018 AMS64_19740 0ffa3d4633f5e4fcf597687a00a3cc95 715 Pfam PF02867 Ribonucleotide reductase, barrel domain 101 651 2.2E-140 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_19740 0ffa3d4633f5e4fcf597687a00a3cc95 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 355 378 1.2E-15 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_19740 0ffa3d4633f5e4fcf597687a00a3cc95 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 538 1.2E-15 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_19740 0ffa3d4633f5e4fcf597687a00a3cc95 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 393 415 1.2E-15 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_19740 0ffa3d4633f5e4fcf597687a00a3cc95 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 176 195 1.2E-15 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_19740 0ffa3d4633f5e4fcf597687a00a3cc95 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 317 328 1.2E-15 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMS64_19740 0ffa3d4633f5e4fcf597687a00a3cc95 715 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 24 659 3.6E-173 T 11-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMS64_08275 2a1c747b39ebac852febbe42ab002e29 388 SUPERFAMILY SSF52210 239 384 1.01E-52 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMS64_08275 2a1c747b39ebac852febbe42ab002e29 388 Gene3D G3DSA:3.40.50.261 240 388 1.7E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMS64_08275 2a1c747b39ebac852febbe42ab002e29 388 Pfam PF00549 CoA-ligase 262 382 5.9E-24 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMS64_08275 2a1c747b39ebac852febbe42ab002e29 388 Pfam PF08442 ATP-grasp domain 2 203 1.5E-81 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMS64_08275 2a1c747b39ebac852febbe42ab002e29 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMS64_08275 2a1c747b39ebac852febbe42ab002e29 388 Gene3D G3DSA:3.30.470.20 1 234 6.9E-95 T 11-10-2018 AMS64_08275 2a1c747b39ebac852febbe42ab002e29 388 SUPERFAMILY SSF56059 1 237 1.49E-82 T 11-10-2018 AMS64_08275 2a1c747b39ebac852febbe42ab002e29 388 PIRSF PIRSF001554 1 388 1.6E-153 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMS64_08275 2a1c747b39ebac852febbe42ab002e29 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.2E-176 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMS64_08275 2a1c747b39ebac852febbe42ab002e29 388 Gene3D G3DSA:3.30.1490.20 21 104 6.9E-95 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMS64_08275 2a1c747b39ebac852febbe42ab002e29 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.853 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMS64_07785 62ac8b43a5b4d3adf8edb86485449b64 133 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 25 120 6.7E-10 T 11-10-2018 IPR039366 YscW/ExsB AMS64_07785 62ac8b43a5b4d3adf8edb86485449b64 133 Gene3D G3DSA:2.60.40.2990 17 133 6.2E-34 T 11-10-2018 AMS64_07785 62ac8b43a5b4d3adf8edb86485449b64 133 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 6 132 5.9E-31 T 11-10-2018 IPR013400 Type III secretion system chaperone, YscW AMS64_13770 62ac8b43a5b4d3adf8edb86485449b64 133 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 25 120 6.7E-10 T 11-10-2018 IPR039366 YscW/ExsB AMS64_13770 62ac8b43a5b4d3adf8edb86485449b64 133 Gene3D G3DSA:2.60.40.2990 17 133 6.2E-34 T 11-10-2018 AMS64_13770 62ac8b43a5b4d3adf8edb86485449b64 133 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 6 132 5.9E-31 T 11-10-2018 IPR013400 Type III secretion system chaperone, YscW AMS64_04160 45494ca0670222275d9c9b8750805ba1 313 SUPERFAMILY SSF53850 19 306 5.02E-53 T 11-10-2018 AMS64_04160 45494ca0670222275d9c9b8750805ba1 313 Gene3D G3DSA:3.40.190.10 107 242 5.4E-71 T 11-10-2018 AMS64_04160 45494ca0670222275d9c9b8750805ba1 313 Gene3D G3DSA:3.40.190.10 23 306 5.4E-71 T 11-10-2018 AMS64_04160 45494ca0670222275d9c9b8750805ba1 313 Pfam PF16868 NMT1-like family 23 306 6.7E-62 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AMS64_04160 45494ca0670222275d9c9b8750805ba1 313 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 14 307 2.8E-66 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AMS64_02920 c6d2cccf4fed308e0cbabc71124c4415 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.5E-46 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AMS64_02920 c6d2cccf4fed308e0cbabc71124c4415 130 Gene3D G3DSA:3.30.230.10 1 130 8.5E-54 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_02920 c6d2cccf4fed308e0cbabc71124c4415 130 SUPERFAMILY SSF54211 5 130 1.4E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_02920 c6d2cccf4fed308e0cbabc71124c4415 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.25 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AMS64_02920 c6d2cccf4fed308e0cbabc71124c4415 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AMS64_08910 f7bb9f22a9cadcd57e00e6bb9fbb2d77 208 Pfam PF08768 Domain of unknown function (DUF1794) 30 206 3.9E-16 T 11-10-2018 IPR014878 Domain of unknown function DUF1794 AMS64_08910 f7bb9f22a9cadcd57e00e6bb9fbb2d77 208 PIRSF PIRSF036226 1 208 1.7E-73 T 11-10-2018 IPR014602 Uncharacterised conserved protein UCP036226 AMS64_08910 f7bb9f22a9cadcd57e00e6bb9fbb2d77 208 SUPERFAMILY SSF50814 30 206 2.53E-21 T 11-10-2018 IPR012674 Calycin AMS64_19955 30dfcbdbd32153852fdf13229c4da9bf 144 Pfam PF03603 DNA polymerase III psi subunit 6 137 5.6E-11 T 11-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_19955 30dfcbdbd32153852fdf13229c4da9bf 144 SUPERFAMILY SSF102220 66 139 1.96E-6 T 11-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_08020 2e7832059938c8bbf47a8ceb50e05aec 409 Gene3D G3DSA:3.30.70.270 246 409 2.0E-50 T 11-10-2018 AMS64_08020 2e7832059938c8bbf47a8ceb50e05aec 409 Pfam PF17152 Periplasmic sensor domain 46 145 2.6E-26 T 11-10-2018 IPR033417 Periplasmic sensor domain CHASE8 AMS64_08020 2e7832059938c8bbf47a8ceb50e05aec 409 SUPERFAMILY SSF55073 254 403 6.12E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_08020 2e7832059938c8bbf47a8ceb50e05aec 409 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 247 405 1.6E-37 T 11-10-2018 IPR000160 GGDEF domain AMS64_08020 2e7832059938c8bbf47a8ceb50e05aec 409 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 403 6.6E-42 T 11-10-2018 IPR000160 GGDEF domain AMS64_08020 2e7832059938c8bbf47a8ceb50e05aec 409 SMART SM00267 238 407 2.5E-47 T 11-10-2018 IPR000160 GGDEF domain AMS64_22385 c55365f37507dd11e89e517827eb6498 351 Gene3D G3DSA:3.30.565.10 194 351 1.1E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_22385 c55365f37507dd11e89e517827eb6498 351 SMART SM00388 131 196 5.8E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_22385 c55365f37507dd11e89e517827eb6498 351 Gene3D G3DSA:3.30.450.20 5 114 5.0E-26 T 11-10-2018 AMS64_22385 c55365f37507dd11e89e517827eb6498 351 Pfam PF00989 PAS fold 10 108 4.4E-14 T 11-10-2018 IPR013767 PAS fold GO:0006355 AMS64_22385 c55365f37507dd11e89e517827eb6498 351 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 122 7.4E-8 T 11-10-2018 IPR000014 PAS domain AMS64_22385 c55365f37507dd11e89e517827eb6498 351 SMART SM00091 6 74 7.9E-4 T 11-10-2018 IPR000014 PAS domain AMS64_22385 c55365f37507dd11e89e517827eb6498 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 192 2.2E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_22385 c55365f37507dd11e89e517827eb6498 351 SUPERFAMILY SSF55785 9 107 4.54E-11 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_22385 c55365f37507dd11e89e517827eb6498 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 283 297 8.1E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_22385 c55365f37507dd11e89e517827eb6498 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 330 8.1E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_22385 c55365f37507dd11e89e517827eb6498 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 350 2.2E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_22385 c55365f37507dd11e89e517827eb6498 351 Gene3D G3DSA:1.10.287.130 117 193 5.6E-15 T 11-10-2018 AMS64_22385 c55365f37507dd11e89e517827eb6498 351 SUPERFAMILY SSF47384 124 195 1.79E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_22385 c55365f37507dd11e89e517827eb6498 351 SUPERFAMILY SSF55874 198 348 1.3E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_22385 c55365f37507dd11e89e517827eb6498 351 SMART SM00387 235 351 2.4E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00880 1fdb4336cdc4bca55d0aa6fe2aafc5c3 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00880 1fdb4336cdc4bca55d0aa6fe2aafc5c3 689 SUPERFAMILY SSF109604 342 491 1.04E-14 T 11-10-2018 AMS64_00880 1fdb4336cdc4bca55d0aa6fe2aafc5c3 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 3.9E-208 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00880 1fdb4336cdc4bca55d0aa6fe2aafc5c3 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 9.2E-299 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00880 1fdb4336cdc4bca55d0aa6fe2aafc5c3 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.8E-34 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00880 1fdb4336cdc4bca55d0aa6fe2aafc5c3 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 1.8E-34 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00880 1fdb4336cdc4bca55d0aa6fe2aafc5c3 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 1.8E-34 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00880 1fdb4336cdc4bca55d0aa6fe2aafc5c3 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.8E-34 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00880 1fdb4336cdc4bca55d0aa6fe2aafc5c3 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 1.8E-34 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMS64_00880 1fdb4336cdc4bca55d0aa6fe2aafc5c3 689 Pfam PF05746 DALR anticodon binding domain 582 679 4.1E-9 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMS64_00880 1fdb4336cdc4bca55d0aa6fe2aafc5c3 689 SMART SM00836 585 688 0.0012 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMS64_06795 823417495515e335fe1c3c46c00a6b92 315 Gene3D G3DSA:3.40.50.2020 7 302 5.0E-136 T 11-10-2018 AMS64_06795 823417495515e335fe1c3c46c00a6b92 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 6.7E-50 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMS64_06795 823417495515e335fe1c3c46c00a6b92 315 SUPERFAMILY SSF53271 69 306 4.3E-67 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMS64_06795 823417495515e335fe1c3c46c00a6b92 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AMS64_06795 823417495515e335fe1c3c46c00a6b92 315 SMART SM01400 4 121 1.2E-77 T 11-10-2018 AMS64_06795 823417495515e335fe1c3c46c00a6b92 315 Gene3D G3DSA:3.40.50.2020 148 290 5.0E-136 T 11-10-2018 AMS64_06795 823417495515e335fe1c3c46c00a6b92 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 50.015 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AMS64_06795 823417495515e335fe1c3c46c00a6b92 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 3.2E-31 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMS64_06795 823417495515e335fe1c3c46c00a6b92 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 8.7E-127 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMS64_12620 679aa50f87b11ea926bd5a0c22a782e4 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 3.5E-26 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMS64_12620 679aa50f87b11ea926bd5a0c22a782e4 137 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AMS64_12620 679aa50f87b11ea926bd5a0c22a782e4 137 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 3.1E-67 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AMS64_12620 679aa50f87b11ea926bd5a0c22a782e4 137 SUPERFAMILY SSF54593 1 130 7.25E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_12620 679aa50f87b11ea926bd5a0c22a782e4 137 Gene3D G3DSA:3.10.180.10 1 131 7.0E-49 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_18230 394bbfd118f3c453be09bfe997c0a065 377 PIRSF PIRSF037565 1 377 3.0E-157 T 11-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 AMS64_18230 394bbfd118f3c453be09bfe997c0a065 377 Gene3D G3DSA:3.40.50.150 191 377 1.2E-51 T 11-10-2018 AMS64_18230 394bbfd118f3c453be09bfe997c0a065 377 Pfam PF05175 Methyltransferase small domain 203 373 5.3E-54 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AMS64_18230 394bbfd118f3c453be09bfe997c0a065 377 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 50.74 T 11-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 AMS64_18230 394bbfd118f3c453be09bfe997c0a065 377 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMS64_18230 394bbfd118f3c453be09bfe997c0a065 377 SUPERFAMILY SSF53335 196 371 1.7E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_18230 394bbfd118f3c453be09bfe997c0a065 377 Gene3D G3DSA:3.40.50.150 9 182 2.3E-53 T 11-10-2018 AMS64_19120 c27b1823d64b3819bb687774dee0caa5 343 SUPERFAMILY SSF52540 38 309 9.61E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19120 c27b1823d64b3819bb687774dee0caa5 343 Pfam PF00005 ABC transporter 31 181 6.9E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_19120 c27b1823d64b3819bb687774dee0caa5 343 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 298 5.7E-16 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_19120 c27b1823d64b3819bb687774dee0caa5 343 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_19120 c27b1823d64b3819bb687774dee0caa5 343 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 318 1.7E-26 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_19120 c27b1823d64b3819bb687774dee0caa5 343 Gene3D G3DSA:3.40.50.300 1 327 6.8E-102 T 11-10-2018 AMS64_19120 c27b1823d64b3819bb687774dee0caa5 343 SMART SM00382 39 231 2.6E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_22600 3e4f60f9583435bae13196e6c1f5e76c 392 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 4 390 4.0E-147 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AMS64_22600 3e4f60f9583435bae13196e6c1f5e76c 392 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 165 391 1.1E-77 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AMS64_22600 3e4f60f9583435bae13196e6c1f5e76c 392 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 392 46.041 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AMS64_22600 3e4f60f9583435bae13196e6c1f5e76c 392 SUPERFAMILY SSF54675 1 134 4.91E-39 T 11-10-2018 AMS64_22600 3e4f60f9583435bae13196e6c1f5e76c 392 Gene3D G3DSA:3.20.140.10 1 392 2.7E-149 T 11-10-2018 AMS64_22600 3e4f60f9583435bae13196e6c1f5e76c 392 SUPERFAMILY SSF51690 116 389 3.34E-85 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AMS64_22600 3e4f60f9583435bae13196e6c1f5e76c 392 PIRSF PIRSF000484 1 389 1.8E-63 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AMS64_08505 3e07345c16e2dc3bbec0dcfb714de65b 109 Gene3D G3DSA:3.30.1310.10 1 109 6.0E-48 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMS64_08505 3e07345c16e2dc3bbec0dcfb714de65b 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 5.8E-36 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMS64_08505 3e07345c16e2dc3bbec0dcfb714de65b 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 4.7E-38 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMS64_08505 3e07345c16e2dc3bbec0dcfb714de65b 109 PIRSF PIRSF004555 3 109 3.2E-40 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMS64_08505 3e07345c16e2dc3bbec0dcfb714de65b 109 SUPERFAMILY SSF82607 11 103 3.01E-36 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMS64_08505 3e07345c16e2dc3bbec0dcfb714de65b 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.375 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMS64_19200 c9a3fda3ee713c84f0a3e40cd281a8f5 222 Pfam PF04225 Opacity-associated protein A LysM-like domain 139 217 2.9E-11 T 11-10-2018 IPR007340 Opacity-associated protein A AMS64_19200 c9a3fda3ee713c84f0a3e40cd281a8f5 222 Gene3D G3DSA:3.10.450.350 128 210 1.2E-7 T 11-10-2018 AMS64_02915 d27eec38ef463423a2cdefc784aa8e99 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 3.0E-65 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02915 d27eec38ef463423a2cdefc784aa8e99 142 Gene3D G3DSA:3.90.1180.10 1 142 1.6E-63 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AMS64_02915 d27eec38ef463423a2cdefc784aa8e99 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AMS64_02915 d27eec38ef463423a2cdefc784aa8e99 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.246 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMS64_02915 d27eec38ef463423a2cdefc784aa8e99 142 PIRSF PIRSF002181 1 142 7.0E-51 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMS64_02915 d27eec38ef463423a2cdefc784aa8e99 142 Pfam PF00572 Ribosomal protein L13 15 138 2.0E-56 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMS64_02915 d27eec38ef463423a2cdefc784aa8e99 142 SUPERFAMILY SSF52161 1 140 1.44E-59 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AMS64_19770 17069b5e7f873989e803125297c08ef4 643 Gene3D G3DSA:3.20.20.450 373 626 2.4E-84 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_19770 17069b5e7f873989e803125297c08ef4 643 SMART SM00267 195 362 3.9E-30 T 11-10-2018 IPR000160 GGDEF domain AMS64_19770 17069b5e7f873989e803125297c08ef4 643 SMART SM00052 372 619 3.4E-86 T 11-10-2018 IPR001633 EAL domain AMS64_19770 17069b5e7f873989e803125297c08ef4 643 SUPERFAMILY SSF55073 211 357 1.02E-32 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_19770 17069b5e7f873989e803125297c08ef4 643 Pfam PF00990 Diguanylate cyclase, GGDEF domain 206 355 2.0E-28 T 11-10-2018 IPR000160 GGDEF domain AMS64_19770 17069b5e7f873989e803125297c08ef4 643 Pfam PF00563 EAL domain 382 614 1.0E-63 T 11-10-2018 IPR001633 EAL domain AMS64_19770 17069b5e7f873989e803125297c08ef4 643 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 205 354 5.9E-23 T 11-10-2018 IPR000160 GGDEF domain AMS64_19770 17069b5e7f873989e803125297c08ef4 643 SUPERFAMILY SSF141868 378 626 5.89E-74 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_19770 17069b5e7f873989e803125297c08ef4 643 Gene3D G3DSA:3.30.70.270 201 362 7.9E-36 T 11-10-2018 AMS64_19140 11830ae02d292e97a93571c61ea9d12f 199 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 106 3.9E-37 T 11-10-2018 IPR018648 Protein of unknown function DUF2076 AMS64_19140 11830ae02d292e97a93571c61ea9d12f 199 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 97 193 7.9E-17 T 11-10-2018 IPR018648 Protein of unknown function DUF2076 AMS64_17565 29aa0e86455a9872806e26f869b3a0c6 231 Pfam PF00072 Response regulator receiver domain 7 116 5.3E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_17565 29aa0e86455a9872806e26f869b3a0c6 231 SUPERFAMILY SSF52172 3 132 1.42E-26 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_17565 29aa0e86455a9872806e26f869b3a0c6 231 PIRSF PIRSF006171 2 230 7.3E-65 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 AMS64_17565 29aa0e86455a9872806e26f869b3a0c6 231 Gene3D G3DSA:3.40.50.12740 4 211 6.8E-24 T 11-10-2018 AMS64_17565 29aa0e86455a9872806e26f869b3a0c6 231 SMART SM00448 4 117 1.5E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_21160 3e1b508e311f9ea03df7b03b0306265e 663 Pfam PF01964 Radical SAM ThiC family 153 600 1.2E-199 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMS64_21160 3e1b508e311f9ea03df7b03b0306265e 663 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 152 604 1.6E-221 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMS64_21160 3e1b508e311f9ea03df7b03b0306265e 663 Pfam PF13667 ThiC-associated domain 32 112 5.6E-30 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMS64_21160 3e1b508e311f9ea03df7b03b0306265e 663 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 152 605 99.954 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMS64_21160 3e1b508e311f9ea03df7b03b0306265e 663 Gene3D G3DSA:3.20.20.540 223 536 3.8E-154 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMS64_07305 75467200e9d3d65d4b75281e7fe2657f 443 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 25 436 2.9E-200 T 11-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_07305 75467200e9d3d65d4b75281e7fe2657f 443 SMART SM00382 159 342 2.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_07305 75467200e9d3d65d4b75281e7fe2657f 443 Gene3D G3DSA:3.40.50.12240 19 440 1.5E-155 T 11-10-2018 AMS64_07305 75467200e9d3d65d4b75281e7fe2657f 443 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 8.0E-180 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_07305 75467200e9d3d65d4b75281e7fe2657f 443 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_07305 75467200e9d3d65d4b75281e7fe2657f 443 SUPERFAMILY SSF52540 93 364 3.99E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07305 75467200e9d3d65d4b75281e7fe2657f 443 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 358 1.6E-74 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_21455 19ab0770c9be40d85dc88ba3e401faf2 508 Gene3D G3DSA:3.20.20.450 254 503 5.0E-70 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_21455 19ab0770c9be40d85dc88ba3e401faf2 508 SUPERFAMILY SSF141868 261 502 2.22E-70 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_21455 19ab0770c9be40d85dc88ba3e401faf2 508 Pfam PF00563 EAL domain 262 487 6.8E-60 T 11-10-2018 IPR001633 EAL domain AMS64_21455 19ab0770c9be40d85dc88ba3e401faf2 508 SMART SM00052 254 492 4.3E-76 T 11-10-2018 IPR001633 EAL domain AMS64_00170 bb5e1c4a9c99e091ec8ec87bbe9246e8 374 SUPERFAMILY SSF56059 103 296 4.95E-47 T 11-10-2018 AMS64_00170 bb5e1c4a9c99e091ec8ec87bbe9246e8 374 SUPERFAMILY SSF51246 301 369 1.57E-17 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMS64_00170 bb5e1c4a9c99e091ec8ec87bbe9246e8 374 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 7 355 37.876 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMS64_00170 bb5e1c4a9c99e091ec8ec87bbe9246e8 374 Gene3D G3DSA:3.30.1490.20 108 178 2.2E-16 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMS64_00170 bb5e1c4a9c99e091ec8ec87bbe9246e8 374 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 7 360 2.9E-105 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMS64_00170 bb5e1c4a9c99e091ec8ec87bbe9246e8 374 Gene3D G3DSA:3.40.50.20 1 107 2.1E-40 T 11-10-2018 AMS64_00170 bb5e1c4a9c99e091ec8ec87bbe9246e8 374 Gene3D G3DSA:3.30.470.20 180 371 9.5E-61 T 11-10-2018 AMS64_00170 bb5e1c4a9c99e091ec8ec87bbe9246e8 374 SUPERFAMILY SSF52440 7 101 1.58E-25 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMS64_00170 bb5e1c4a9c99e091ec8ec87bbe9246e8 374 Pfam PF02222 ATP-grasp domain 112 276 1.8E-38 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AMS64_14250 e49d8bc59e704db9045681606382b4d4 76 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 8 70 2.7E-28 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AMS64_14250 e49d8bc59e704db9045681606382b4d4 76 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 17 72 4.0E-17 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AMS64_02365 854893af6cf053f67b2064f7c7bf3e9b 177 Pfam PF06271 RDD family 22 159 2.1E-16 T 11-10-2018 IPR010432 RDD AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 306 4.5E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 Gene3D G3DSA:1.10.287.130 193 302 7.5E-21 T 11-10-2018 AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 SMART SM00387 346 453 4.5E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 SMART SM00388 249 307 5.4E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 Pfam PF00672 HAMP domain 196 244 1.3E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 SUPERFAMILY SSF55874 309 453 2.75E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 3.5E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 3.5E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 3.5E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 3.5E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 453 9.7E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 SMART SM00304 196 248 1.4E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 SUPERFAMILY SSF47384 233 305 2.75E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_02125 d6f2f900fd376907cbd79f9529bb2273 453 Gene3D G3DSA:3.30.565.10 332 453 8.3E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_07835 a47cdb9f0d04b7013f2e1b197cee12c4 112 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 112 9.0E-27 T 11-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 AMS64_07835 a47cdb9f0d04b7013f2e1b197cee12c4 112 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 74 112 8.0E-20 T 11-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 AMS64_13720 a47cdb9f0d04b7013f2e1b197cee12c4 112 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 112 9.0E-27 T 11-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 AMS64_13720 a47cdb9f0d04b7013f2e1b197cee12c4 112 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 74 112 8.0E-20 T 11-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 AMS64_11605 ae06c214ac3d809329fa4f2d50e287db 258 Pfam PF13431 Tetratricopeptide repeat 99 130 1.1E-7 T 11-10-2018 AMS64_11605 ae06c214ac3d809329fa4f2d50e287db 258 SMART SM00028 146 179 6.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_11605 ae06c214ac3d809329fa4f2d50e287db 258 SMART SM00028 76 109 0.016 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_11605 ae06c214ac3d809329fa4f2d50e287db 258 SMART SM00028 110 143 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_11605 ae06c214ac3d809329fa4f2d50e287db 258 SMART SM00028 42 75 0.021 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_11605 ae06c214ac3d809329fa4f2d50e287db 258 SUPERFAMILY SSF48452 47 210 6.26E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_11605 ae06c214ac3d809329fa4f2d50e287db 258 Gene3D G3DSA:1.25.40.10 39 256 2.3E-45 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_11605 ae06c214ac3d809329fa4f2d50e287db 258 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 8 245 2.1E-67 T 11-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW AMS64_11605 ae06c214ac3d809329fa4f2d50e287db 258 Pfam PF13181 Tetratricopeptide repeat 146 178 0.021 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_11605 ae06c214ac3d809329fa4f2d50e287db 258 Pfam PF13181 Tetratricopeptide repeat 49 75 0.17 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_02945 350e27e9d2b232909462d3ab5a188661 141 SUPERFAMILY SSF101738 5 114 1.7E-47 T 11-10-2018 IPR036760 SspB-like superfamily AMS64_02945 350e27e9d2b232909462d3ab5a188661 141 PIRSF PIRSF005276 4 141 9.7E-55 T 11-10-2018 IPR007481 Stringent starvation protein B AMS64_02945 350e27e9d2b232909462d3ab5a188661 141 Pfam PF04386 Stringent starvation protein B 10 140 1.7E-35 T 11-10-2018 IPR007481 Stringent starvation protein B AMS64_02945 350e27e9d2b232909462d3ab5a188661 141 Gene3D G3DSA:2.30.30.220 4 128 2.1E-49 T 11-10-2018 IPR036760 SspB-like superfamily AMS64_04105 0a3755b424742f41f0cc2581daa1d2b0 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 6.8E-21 T 11-10-2018 IPR014318 Phage shock protein, PspG AMS64_04105 0a3755b424742f41f0cc2581daa1d2b0 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 1.5E-16 T 11-10-2018 IPR014318 Phage shock protein, PspG AMS64_12990 87ebba8d1827ede7bb99b9c51416e5d8 146 Gene3D G3DSA:2.60.40.420 20 146 5.2E-44 T 11-10-2018 IPR008972 Cupredoxin AMS64_12990 87ebba8d1827ede7bb99b9c51416e5d8 146 TIGRFAM TIGR02695 azurin: azurin 22 145 2.6E-55 T 11-10-2018 IPR014068 Azurin AMS64_12990 87ebba8d1827ede7bb99b9c51416e5d8 146 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 21 146 2.3E-23 T 11-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AMS64_12990 87ebba8d1827ede7bb99b9c51416e5d8 146 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 26 144 9.0E-41 T 11-10-2018 AMS64_12990 87ebba8d1827ede7bb99b9c51416e5d8 146 SUPERFAMILY SSF49503 21 145 3.95E-43 T 11-10-2018 IPR008972 Cupredoxin AMS64_01365 cfe193087d9dbf9ed5a3fedb0f2ed594 396 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AMS64_01365 cfe193087d9dbf9ed5a3fedb0f2ed594 396 SUPERFAMILY SSF53383 5 394 4.39E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_01365 cfe193087d9dbf9ed5a3fedb0f2ed594 396 Gene3D G3DSA:3.40.640.10 57 295 3.7E-138 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_01365 cfe193087d9dbf9ed5a3fedb0f2ed594 396 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 394 54.727 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AMS64_01365 cfe193087d9dbf9ed5a3fedb0f2ed594 396 Gene3D G3DSA:3.90.1150.10 36 386 3.7E-138 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_01365 cfe193087d9dbf9ed5a3fedb0f2ed594 396 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 396 7.1E-216 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AMS64_01365 cfe193087d9dbf9ed5a3fedb0f2ed594 396 Pfam PF00155 Aminotransferase class I and II 42 385 6.0E-75 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMS64_10025 f9bbb60a4e3b3483df263abe7bf5f573 330 SMART SM00327 76 272 2.7E-23 T 11-10-2018 IPR002035 von Willebrand factor, type A AMS64_10025 f9bbb60a4e3b3483df263abe7bf5f573 330 SUPERFAMILY SSF53300 76 269 2.97E-32 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_10025 f9bbb60a4e3b3483df263abe7bf5f573 330 Pfam PF00092 von Willebrand factor type A domain 78 269 2.7E-19 T 11-10-2018 IPR002035 von Willebrand factor, type A AMS64_10025 f9bbb60a4e3b3483df263abe7bf5f573 330 Gene3D G3DSA:3.40.50.410 76 278 4.1E-45 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_01480 a66b92b946300bd2a6ab79a108eb0090 332 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 28 313 9.3E-62 T 11-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 AMS64_01480 a66b92b946300bd2a6ab79a108eb0090 332 Gene3D G3DSA:3.40.50.2300 127 319 9.2E-95 T 11-10-2018 AMS64_01480 a66b92b946300bd2a6ab79a108eb0090 332 SUPERFAMILY SSF53822 44 268 2.56E-16 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_01480 a66b92b946300bd2a6ab79a108eb0090 332 Gene3D G3DSA:3.40.50.2300 27 283 9.2E-95 T 11-10-2018 AMS64_17360 110fa1b69494f81bff73fdb47edffebc 291 Pfam PF01734 Patatin-like phospholipase 9 167 4.6E-21 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMS64_17360 110fa1b69494f81bff73fdb47edffebc 291 SUPERFAMILY SSF52151 4 282 7.85E-59 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMS64_17360 110fa1b69494f81bff73fdb47edffebc 291 Gene3D G3DSA:3.40.1090.10 1 95 1.5E-22 T 11-10-2018 AMS64_17360 110fa1b69494f81bff73fdb47edffebc 291 Gene3D G3DSA:3.40.1090.10 96 191 1.4E-12 T 11-10-2018 AMS64_03750 26fe93373d341b0363ccebc376f03a03 654 Pfam PF00884 Sulfatase 285 555 1.2E-42 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AMS64_03750 26fe93373d341b0363ccebc376f03a03 654 Gene3D G3DSA:3.30.1120.80 274 643 4.0E-147 T 11-10-2018 AMS64_03750 26fe93373d341b0363ccebc376f03a03 654 SUPERFAMILY SSF53649 283 609 6.8E-68 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMS64_03750 26fe93373d341b0363ccebc376f03a03 654 PIRSF PIRSF005091 14 647 1.9E-100 T 11-10-2018 IPR012160 Lipoteichoic acid synthase-like AMS64_03750 26fe93373d341b0363ccebc376f03a03 654 Gene3D G3DSA:3.40.720.10 276 562 4.0E-147 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMS64_00155 8cd4a1e6b83cdaa3a53713ece7c4ad8e 308 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 5 303 8.7E-108 T 11-10-2018 IPR010293 Na+-dependent bicarbonate transporter superfamily AMS64_15925 7a3f4a4a3b6edce4b5cdf734ab10ddc2 362 Gene3D G3DSA:3.40.50.970 1 350 1.1E-102 T 11-10-2018 AMS64_15925 7a3f4a4a3b6edce4b5cdf734ab10ddc2 362 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 9 349 7.0E-136 T 11-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMS64_15925 7a3f4a4a3b6edce4b5cdf734ab10ddc2 362 SUPERFAMILY SSF52518 3 350 1.02E-95 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_15925 7a3f4a4a3b6edce4b5cdf734ab10ddc2 362 Pfam PF00676 Dehydrogenase E1 component 35 325 5.7E-79 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 181 196 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 181 201 1.2E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 74 94 1.2E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 94 113 1.2E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 251 1.2E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 55 74 1.2E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 202 223 1.2E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 125 139 2.7E-24 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 113 125 2.7E-24 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 242 252 2.7E-24 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 153 165 2.7E-24 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 53 62 2.7E-24 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 174 186 2.7E-24 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 57 252 9.5E-85 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 Pfam PF00813 FliP family 57 248 1.0E-79 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_07340 7f1c70dd406c31fe9f38905bfb42d979 257 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 229 241 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_19880 2bfd524cb7545fd1662649d045cd9dc5 198 Pfam PF01725 Ham1 family 4 192 7.5E-56 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AMS64_19880 2bfd524cb7545fd1662649d045cd9dc5 198 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 48.281 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 AMS64_19880 2bfd524cb7545fd1662649d045cd9dc5 198 SUPERFAMILY SSF52972 1 194 1.6E-71 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMS64_19880 2bfd524cb7545fd1662649d045cd9dc5 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 5.6E-59 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AMS64_19880 2bfd524cb7545fd1662649d045cd9dc5 198 Gene3D G3DSA:3.90.950.10 1 198 1.6E-76 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMS64_14680 742c132d509900b8511a2de01e25c031 378 SUPERFAMILY SSF54593 9 348 9.11E-79 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_14680 742c132d509900b8511a2de01e25c031 378 Gene3D G3DSA:3.10.180.10 8 162 4.3E-47 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_14680 742c132d509900b8511a2de01e25c031 378 PIRSF PIRSF009283 1 362 1.3E-121 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMS64_14680 742c132d509900b8511a2de01e25c031 378 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 12 150 7.1E-57 T 11-10-2018 AMS64_14680 742c132d509900b8511a2de01e25c031 378 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 18 361 1.1E-129 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMS64_14680 742c132d509900b8511a2de01e25c031 378 Gene3D G3DSA:3.10.180.10 165 362 2.3E-67 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_14680 742c132d509900b8511a2de01e25c031 378 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 170 282 9.0E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMS64_09780 68ec900da4fda654d4fa3b076400e16d 315 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 9 192 7.8E-63 T 11-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_09780 68ec900da4fda654d4fa3b076400e16d 315 SUPERFAMILY SSF52540 8 196 1.54E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09780 68ec900da4fda654d4fa3b076400e16d 315 Pfam PF13177 DNA polymerase III, delta subunit 10 157 1.8E-47 T 11-10-2018 AMS64_09780 68ec900da4fda654d4fa3b076400e16d 315 Gene3D G3DSA:3.40.50.300 1 160 1.9E-52 T 11-10-2018 AMS64_09780 68ec900da4fda654d4fa3b076400e16d 315 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 204 314 1.6E-20 T 11-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_09780 68ec900da4fda654d4fa3b076400e16d 315 SUPERFAMILY SSF48019 206 293 8.33E-8 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMS64_08140 e6ca04b172deb138fa333b341399217e 145 PIRSF PIRSF006173 1 145 6.6E-66 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AMS64_08140 e6ca04b172deb138fa333b341399217e 145 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 7.0E-9 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AMS64_08140 e6ca04b172deb138fa333b341399217e 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 41.204 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AMS64_02355 c8ea76a2d2870f659052f8f4619e96bf 370 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 345 1.3E-115 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AMS64_02355 c8ea76a2d2870f659052f8f4619e96bf 370 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 345 9.0E-74 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AMS64_09615 8af843b8810fdfd826187eb8591b5d78 114 ProDom PD071248 DNA-BINDING SINGLE STRANDED DNA PHAGE PROTIEN GPV HELIX-DESTABILIZING SINGLE-STRANDED REPLICATION 4 104 4.0E-18 T 11-10-2018 IPR035411 Putative DNA-Binding protein G5P AMS64_09615 8af843b8810fdfd826187eb8591b5d78 114 Pfam PF17426 Putative Gamma DNA binding protein G5P 1 104 8.7E-19 T 11-10-2018 IPR035411 Putative DNA-Binding protein G5P AMS64_09475 2a7c0be5747a420c5dc48600967811a3 166 Pfam PF05751 FixH 11 151 2.9E-39 T 11-10-2018 IPR008620 Nitrogen fixation protein FixH AMS64_09035 d2e5641948aa228ef0ed633e1263fcbe 161 Gene3D G3DSA:3.10.20.30 4 82 2.2E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_09035 d2e5641948aa228ef0ed633e1263fcbe 161 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 62 2.0E-8 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMS64_09035 d2e5641948aa228ef0ed633e1263fcbe 161 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 47 55 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMS64_09035 d2e5641948aa228ef0ed633e1263fcbe 161 Gene3D G3DSA:1.10.150.120 83 161 1.9E-28 T 11-10-2018 AMS64_09035 d2e5641948aa228ef0ed633e1263fcbe 161 SUPERFAMILY SSF47741 92 160 3.14E-27 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AMS64_09035 d2e5641948aa228ef0ed633e1263fcbe 161 Pfam PF01799 [2Fe-2S] binding domain 81 156 5.6E-28 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMS64_09035 d2e5641948aa228ef0ed633e1263fcbe 161 SUPERFAMILY SSF54292 10 85 4.19E-21 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMS64_16310 7d6a1ac7e4d7d43b2ca9c6bbbbc56cf8 229 Gene3D G3DSA:3.30.1380.10 9 196 2.1E-34 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMS64_16310 7d6a1ac7e4d7d43b2ca9c6bbbbc56cf8 229 SUPERFAMILY SSF55166 17 178 1.8E-19 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMS64_16310 7d6a1ac7e4d7d43b2ca9c6bbbbc56cf8 229 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 22 178 2.1E-36 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AMS64_06600 12dc16b35d691b7366e1504c1c135bca 360 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 358 73.883 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMS64_06600 12dc16b35d691b7366e1504c1c135bca 360 Gene3D G3DSA:3.40.50.1970 1 170 8.4E-66 T 11-10-2018 AMS64_06600 12dc16b35d691b7366e1504c1c135bca 360 Gene3D G3DSA:1.20.1090.10 171 359 1.8E-65 T 11-10-2018 AMS64_06600 12dc16b35d691b7366e1504c1c135bca 360 Pfam PF01761 3-dehydroquinate synthase 65 323 5.1E-109 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMS64_06600 12dc16b35d691b7366e1504c1c135bca 360 SUPERFAMILY SSF56796 4 355 4.71E-119 T 11-10-2018 AMS64_06600 12dc16b35d691b7366e1504c1c135bca 360 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 352 2.0E-118 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMS64_06600 12dc16b35d691b7366e1504c1c135bca 360 PIRSF PIRSF001455 4 358 4.5E-107 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMS64_06165 80080d2d19ef774f92d474ab96b111f6 326 PIRSF PIRSF005963 7 324 9.1E-131 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMS64_06165 80080d2d19ef774f92d474ab96b111f6 326 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 30 73 4.5E-7 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMS64_06165 80080d2d19ef774f92d474ab96b111f6 326 SMART SM00729 84 293 1.8E-19 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMS64_06165 80080d2d19ef774f92d474ab96b111f6 326 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 319 4.9E-147 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMS64_06165 80080d2d19ef774f92d474ab96b111f6 326 Pfam PF04055 Radical SAM superfamily 90 252 6.2E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_06165 80080d2d19ef774f92d474ab96b111f6 326 Gene3D G3DSA:3.20.20.70 52 292 5.5E-25 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_06165 80080d2d19ef774f92d474ab96b111f6 326 SUPERFAMILY SSF102114 52 318 4.45E-70 T 11-10-2018 AMS64_06165 80080d2d19ef774f92d474ab96b111f6 326 Hamap MF_00206 Lipoyl synthase [lipA]. 1 325 156.056 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMS64_20340 d3ef46e0099638e386ee287efa4f480b 301 Pfam PF04261 Dyp-type peroxidase family 41 293 2.0E-66 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AMS64_20340 d3ef46e0099638e386ee287efa4f480b 301 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 4 292 1.5E-65 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AMS64_20340 d3ef46e0099638e386ee287efa4f480b 301 SUPERFAMILY SSF54909 3 295 1.75E-94 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 PIRSF PIRSF000099 1 427 3.7E-164 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 1.9E-161 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 SUPERFAMILY SSF53720 3 426 3.24E-89 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 40.928 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 Gene3D G3DSA:3.40.50.1980 32 229 1.5E-124 T 11-10-2018 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.1E-98 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.1E-98 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 1.1E-98 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 1.1E-98 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.1E-98 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 1.1E-98 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 1.1E-98 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.1E-98 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 Pfam PF00815 Histidinol dehydrogenase 25 424 1.8E-167 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMS64_09105 b929d0dbe65e1a05df208c824ee53dfa 441 Gene3D G3DSA:3.40.50.1980 231 346 1.5E-124 T 11-10-2018 AMS64_22325 ac328bb9e784df970f755f428afc1f53 185 SUPERFAMILY SSF57783 16 54 8.33E-13 T 11-10-2018 AMS64_22325 ac328bb9e784df970f755f428afc1f53 185 Gene3D G3DSA:3.30.65.10 62 106 2.8E-6 T 11-10-2018 AMS64_22325 ac328bb9e784df970f755f428afc1f53 185 Gene3D G3DSA:3.30.65.10 10 61 2.8E-10 T 11-10-2018 AMS64_22325 ac328bb9e784df970f755f428afc1f53 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 109 147 5.9E-15 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMS64_22325 ac328bb9e784df970f755f428afc1f53 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 68 103 3.7E-14 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMS64_22325 ac328bb9e784df970f755f428afc1f53 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 20 55 1.9E-15 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMS64_22325 ac328bb9e784df970f755f428afc1f53 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 152 166 0.49 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMS64_22325 ac328bb9e784df970f755f428afc1f53 185 SUPERFAMILY SSF57783 65 105 4.08E-11 T 11-10-2018 AMS64_12945 41b069df10b4959ffd1d31413ffb7ee2 196 Pfam PF06042 Nucleotidyltransferase 35 193 8.4E-55 T 11-10-2018 IPR009267 Putative nucleotidyltransferase AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.499 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 8.3E-235 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.5E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 SUPERFAMILY SSF50465 298 393 1.09E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 Gene3D G3DSA:2.40.30.10 338 393 1.5E-28 T 11-10-2018 AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.7E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.5E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 2.3E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 SUPERFAMILY SSF50447 205 301 1.96E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 Gene3D G3DSA:2.40.30.10 206 334 1.1E-52 T 11-10-2018 AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 SUPERFAMILY SSF52540 9 226 2.17E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_21780 657b3ffdbf3bafc4b4732327e011100c 394 Gene3D G3DSA:3.40.50.300 1 203 7.0E-70 T 11-10-2018 AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 Pfam PF03572 Peptidase family S41 863 1024 2.1E-18 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 SUPERFAMILY SSF52096 672 1050 4.47E-49 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 Pfam PF07676 WD40-like Beta Propeller Repeat 500 524 0.047 T 11-10-2018 IPR011659 WD40-like Beta Propeller AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 Pfam PF07676 WD40-like Beta Propeller Repeat 73 91 0.0051 T 11-10-2018 IPR011659 WD40-like Beta Propeller AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 Pfam PF07676 WD40-like Beta Propeller Repeat 32 48 0.0038 T 11-10-2018 IPR011659 WD40-like Beta Propeller AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 Pfam PF07676 WD40-like Beta Propeller Repeat 221 246 0.0013 T 11-10-2018 IPR011659 WD40-like Beta Propeller AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 Gene3D G3DSA:3.90.226.10 842 1055 1.0E-47 T 11-10-2018 AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 SUPERFAMILY SSF50156 763 837 2.13E-8 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 SUPERFAMILY SSF82171 198 524 6.67E-27 T 11-10-2018 AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 Gene3D G3DSA:3.30.750.44 672 741 6.1E-11 T 11-10-2018 AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 Gene3D G3DSA:2.30.42.10 761 841 1.5E-9 T 11-10-2018 AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 SUPERFAMILY SSF69304 32 302 2.35E-35 T 11-10-2018 AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 PIRSF PIRSF036421 19 545 4.1E-67 T 11-10-2018 IPR012393 Tricorn protease GO:0008236 AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 PIRSF PIRSF036421 564 1055 7.2E-85 T 11-10-2018 IPR012393 Tricorn protease GO:0008236 AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 Gene3D G3DSA:2.120.10.30 380 549 9.7E-16 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 SMART SM00245 836 1025 8.6E-5 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 Gene3D G3DSA:2.120.10.60 21 300 1.8E-49 T 11-10-2018 AMS64_20565 8cd66088d651ad7f4c75b86596282e3e 1055 Pfam PF14684 Tricorn protease C1 domain 678 740 7.0E-16 T 11-10-2018 IPR028204 Tricorn protease C1 domain AMS64_09705 4c9ef70ceb6a18fff0e990927347ad5a 481 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 14 481 2.6E-264 T 11-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 AMS64_09705 4c9ef70ceb6a18fff0e990927347ad5a 481 Pfam PF03972 MmgE/PrpD family 19 461 8.8E-154 T 11-10-2018 IPR005656 MmgE/PrpD GO:0016829 AMS64_09705 4c9ef70ceb6a18fff0e990927347ad5a 481 SUPERFAMILY SSF103378 13 480 1.44E-156 T 11-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 AMS64_09705 4c9ef70ceb6a18fff0e990927347ad5a 481 Gene3D G3DSA:1.10.4100.10 23 459 3.3E-194 T 11-10-2018 AMS64_09705 4c9ef70ceb6a18fff0e990927347ad5a 481 Gene3D G3DSA:3.30.1330.120 286 424 3.3E-194 T 11-10-2018 AMS64_17925 5b2a10afb59edb4ea74426cbe93385d0 390 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMS64_17925 5b2a10afb59edb4ea74426cbe93385d0 390 Pfam PF07690 Major Facilitator Superfamily 9 332 1.0E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_17925 5b2a10afb59edb4ea74426cbe93385d0 390 Gene3D G3DSA:1.20.1720.10 4 376 5.5E-70 T 11-10-2018 AMS64_17925 5b2a10afb59edb4ea74426cbe93385d0 390 SUPERFAMILY SSF103473 4 374 2.22E-51 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_03505 391f0a605cdf4c64de2b86b96c1eeb7a 335 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 147 1.2E-25 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMS64_03505 391f0a605cdf4c64de2b86b96c1eeb7a 335 SUPERFAMILY SSF55347 156 309 9.35E-48 T 11-10-2018 AMS64_03505 391f0a605cdf4c64de2b86b96c1eeb7a 335 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 334 3.7E-110 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMS64_03505 391f0a605cdf4c64de2b86b96c1eeb7a 335 Gene3D G3DSA:3.40.50.720 6 329 2.8E-112 T 11-10-2018 AMS64_03505 391f0a605cdf4c64de2b86b96c1eeb7a 335 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 151 167 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMS64_03505 391f0a605cdf4c64de2b86b96c1eeb7a 335 Gene3D G3DSA:3.30.360.10 155 313 2.8E-112 T 11-10-2018 AMS64_03505 391f0a605cdf4c64de2b86b96c1eeb7a 335 SMART SM00859 3 148 2.7E-44 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMS64_03505 391f0a605cdf4c64de2b86b96c1eeb7a 335 SUPERFAMILY SSF51735 3 178 2.82E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_03505 391f0a605cdf4c64de2b86b96c1eeb7a 335 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 335 37.168 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMS64_03505 391f0a605cdf4c64de2b86b96c1eeb7a 335 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 165 312 1.9E-12 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMS64_17015 69ee3f3e96be18a1366165ce8ddcab71 234 ProSitePatterns PS01318 TsaA-like domain signature. 86 97 - T 11-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site AMS64_17015 69ee3f3e96be18a1366165ce8ddcab71 234 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 148 2.1E-53 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain AMS64_17015 69ee3f3e96be18a1366165ce8ddcab71 234 Pfam PF01980 Uncharacterised protein family UPF0066 20 142 3.7E-41 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain AMS64_17015 69ee3f3e96be18a1366165ce8ddcab71 234 Gene3D G3DSA:3.30.2310.10 143 229 8.8E-22 T 11-10-2018 AMS64_17015 69ee3f3e96be18a1366165ce8ddcab71 234 Gene3D G3DSA:2.40.30.70 1 141 2.4E-44 T 11-10-2018 IPR036414 YaeB, N-terminal domain superfamily AMS64_17015 69ee3f3e96be18a1366165ce8ddcab71 234 SUPERFAMILY SSF118196 2 228 2.62E-85 T 11-10-2018 IPR036413 YaeB-like superfamily AMS64_06060 5dfba1d387f4c599f8f6a0b2f39a205c 155 Pfam PF12821 Threonine/Serine exporter, ThrE 12 146 2.4E-37 T 11-10-2018 IPR024528 Threonine/Serine exporter, ThrE AMS64_04655 b64361403b4d41920893a3a959512f23 288 Pfam PF01263 Aldose 1-epimerase 22 286 2.2E-40 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AMS64_04655 b64361403b4d41920893a3a959512f23 288 SUPERFAMILY SSF74650 18 285 5.15E-60 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMS64_04655 b64361403b4d41920893a3a959512f23 288 Gene3D G3DSA:2.70.98.10 1 288 2.6E-81 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMS64_04655 b64361403b4d41920893a3a959512f23 288 PIRSF PIRSF016020 4 288 5.8E-59 T 11-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 AMS64_01375 bb4453252b75e0275b2be5c1c5ad34d1 319 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 319 50.527 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AMS64_01375 bb4453252b75e0275b2be5c1c5ad34d1 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 246 1.0E-43 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMS64_01375 bb4453252b75e0275b2be5c1c5ad34d1 319 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 318 1.9E-136 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AMS64_01375 bb4453252b75e0275b2be5c1c5ad34d1 319 Gene3D G3DSA:3.90.25.10 172 300 5.8E-125 T 11-10-2018 AMS64_01375 bb4453252b75e0275b2be5c1c5ad34d1 319 SUPERFAMILY SSF51735 1 316 1.52E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_01375 bb4453252b75e0275b2be5c1c5ad34d1 319 Gene3D G3DSA:3.40.50.720 3 312 5.8E-125 T 11-10-2018 AMS64_06095 e9709356c88726d1d761893c1030a8e4 293 Gene3D G3DSA:1.20.58.410 1 44 9.1E-7 T 11-10-2018 AMS64_06095 e9709356c88726d1d761893c1030a8e4 293 Pfam PF03462 PCRF domain 6 148 8.4E-45 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMS64_06095 e9709356c88726d1d761893c1030a8e4 293 Gene3D G3DSA:3.30.160.20 154 249 1.7E-96 T 11-10-2018 AMS64_06095 e9709356c88726d1d761893c1030a8e4 293 Gene3D G3DSA:3.30.70.1660 58 286 1.7E-96 T 11-10-2018 AMS64_06095 e9709356c88726d1d761893c1030a8e4 293 SUPERFAMILY SSF75620 2 292 3.14E-122 T 11-10-2018 AMS64_06095 e9709356c88726d1d761893c1030a8e4 293 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 173 189 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMS64_06095 e9709356c88726d1d761893c1030a8e4 293 Pfam PF00472 RF-1 domain 156 265 8.0E-42 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMS64_06095 e9709356c88726d1d761893c1030a8e4 293 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 293 31.629 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMS64_06095 e9709356c88726d1d761893c1030a8e4 293 SMART SM00937 13 123 1.9E-49 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMS64_06095 e9709356c88726d1d761893c1030a8e4 293 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 291 3.9E-147 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMS64_13440 bf90febe52bd9cb974512e42d805161f 366 Pfam PF00005 ABC transporter 34 167 1.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_13440 bf90febe52bd9cb974512e42d805161f 366 Gene3D G3DSA:3.40.50.300 22 239 5.7E-58 T 11-10-2018 AMS64_13440 bf90febe52bd9cb974512e42d805161f 366 Gene3D G3DSA:2.40.50.100 300 363 5.1E-10 T 11-10-2018 AMS64_13440 bf90febe52bd9cb974512e42d805161f 366 SMART SM00382 39 216 1.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_13440 bf90febe52bd9cb974512e42d805161f 366 Pfam PF03459 TOBE domain 316 362 7.8E-10 T 11-10-2018 IPR005116 Transport-associated OB, type 1 AMS64_13440 bf90febe52bd9cb974512e42d805161f 366 SUPERFAMILY SSF50331 245 363 3.4E-11 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMS64_13440 bf90febe52bd9cb974512e42d805161f 366 SUPERFAMILY SSF52540 21 231 1.11E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_13440 bf90febe52bd9cb974512e42d805161f 366 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_13440 bf90febe52bd9cb974512e42d805161f 366 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 19 362 3.7E-93 T 11-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 AMS64_00020 a1d06e0d7a9783fc82ee10f67300e518 217 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 217 36.171 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_00020 a1d06e0d7a9783fc82ee10f67300e518 217 SUPERFAMILY SSF53271 2 194 2.07E-47 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMS64_00020 a1d06e0d7a9783fc82ee10f67300e518 217 Gene3D G3DSA:3.40.50.2020 1 217 9.3E-78 T 11-10-2018 AMS64_00020 a1d06e0d7a9783fc82ee10f67300e518 217 Pfam PF00156 Phosphoribosyl transferase domain 44 161 1.4E-12 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMS64_00020 a1d06e0d7a9783fc82ee10f67300e518 217 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 5.7E-67 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMS64_02595 5752918361dc806d810420a25151ae96 404 Pfam PF13356 Arm DNA-binding domain 20 88 6.3E-14 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AMS64_02595 5752918361dc806d810420a25151ae96 404 Gene3D G3DSA:1.10.443.10 217 380 2.1E-16 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_02595 5752918361dc806d810420a25151ae96 404 Gene3D G3DSA:1.10.150.130 91 206 1.0E-29 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_02595 5752918361dc806d810420a25151ae96 404 SUPERFAMILY SSF56349 100 380 2.71E-61 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_02595 5752918361dc806d810420a25151ae96 404 Gene3D G3DSA:3.30.160.390 1 89 1.8E-24 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AMS64_02595 5752918361dc806d810420a25151ae96 404 Pfam PF00589 Phage integrase family 225 369 1.1E-20 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_05925 98e3e8688aa95484fa6e8b149e0c5c82 411 Gene3D G3DSA:3.30.450.40 82 248 5.3E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_05925 98e3e8688aa95484fa6e8b149e0c5c82 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 396 6.4E-26 T 11-10-2018 IPR000160 GGDEF domain AMS64_05925 98e3e8688aa95484fa6e8b149e0c5c82 411 SUPERFAMILY SSF55781 65 246 1.11E-14 T 11-10-2018 AMS64_05925 98e3e8688aa95484fa6e8b149e0c5c82 411 Pfam PF13185 GAF domain 98 246 4.4E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_05925 98e3e8688aa95484fa6e8b149e0c5c82 411 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 397 9.1E-24 T 11-10-2018 IPR000160 GGDEF domain AMS64_05925 98e3e8688aa95484fa6e8b149e0c5c82 411 SMART SM00267 248 401 7.4E-31 T 11-10-2018 IPR000160 GGDEF domain AMS64_05925 98e3e8688aa95484fa6e8b149e0c5c82 411 SUPERFAMILY SSF55073 264 397 3.61E-28 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_05925 98e3e8688aa95484fa6e8b149e0c5c82 411 Gene3D G3DSA:3.30.70.270 249 400 9.9E-35 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 8.9E-234 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 SUPERFAMILY SSF50249 255 369 1.43E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 SUPERFAMILY SSF50249 88 174 6.19E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 Gene3D G3DSA:2.40.50.140 98 181 9.4E-6 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 Gene3D G3DSA:2.40.50.140 269 357 5.6E-29 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 Gene3D G3DSA:2.40.50.140 358 443 3.6E-25 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.4E-97 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.4E-97 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.4E-97 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.4E-97 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.4E-97 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.4E-97 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.4E-97 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.4E-97 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.4E-97 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 SUPERFAMILY SSF50249 189 275 1.64E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 SMART SM00316 362 434 9.7E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 SMART SM00316 103 171 7.4E-8 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 SMART SM00316 449 520 2.7E-20 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 SMART SM00316 190 260 7.0E-28 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 SMART SM00316 275 347 6.9E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 SMART SM00316 19 87 5.8E-5 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 Gene3D G3DSA:2.40.50.140 444 528 8.1E-21 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 SUPERFAMILY SSF50249 363 447 6.93E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 PIRSF PIRSF002111 1 536 6.5E-216 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 SUPERFAMILY SSF50249 2 112 1.55E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 Gene3D G3DSA:2.40.50.140 187 268 6.9E-28 T 11-10-2018 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 SUPERFAMILY SSF50249 429 540 8.21E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 Pfam PF00575 S1 RNA binding domain 19 84 1.1E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 Pfam PF00575 S1 RNA binding domain 449 520 1.7E-15 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 Pfam PF00575 S1 RNA binding domain 278 347 4.1E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 Pfam PF00575 S1 RNA binding domain 190 260 1.2E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 Pfam PF00575 S1 RNA binding domain 361 434 3.7E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 Pfam PF00575 S1 RNA binding domain 105 171 2.1E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMS64_14295 673c7b4e6ecdb02eca52e6494e9483aa 556 Gene3D G3DSA:2.40.50.140 6 97 1.0E-17 T 11-10-2018 AMS64_17260 857be4b663f52d49ce097b3ea8182998 394 Pfam PF12693 GspL periplasmic domain 238 390 4.6E-42 T 11-10-2018 IPR025691 GspL periplasmic domain AMS64_17260 857be4b663f52d49ce097b3ea8182998 394 Pfam PF05134 Type II secretion system (T2SS), protein L 5 232 2.4E-63 T 11-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AMS64_17260 857be4b663f52d49ce097b3ea8182998 394 Gene3D G3DSA:3.30.1360.100 303 393 9.1E-25 T 11-10-2018 AMS64_17260 857be4b663f52d49ce097b3ea8182998 394 PIRSF PIRSF015761 14 393 4.5E-43 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AMS64_17260 857be4b663f52d49ce097b3ea8182998 394 Gene3D G3DSA:3.30.420.370 142 208 1.5E-84 T 11-10-2018 AMS64_17260 857be4b663f52d49ce097b3ea8182998 394 Gene3D G3DSA:3.30.420.380 3 230 1.5E-84 T 11-10-2018 AMS64_17260 857be4b663f52d49ce097b3ea8182998 394 SUPERFAMILY SSF53067 147 231 2.27E-22 T 11-10-2018 AMS64_17260 857be4b663f52d49ce097b3ea8182998 394 SUPERFAMILY SSF53067 2 143 2.59E-41 T 11-10-2018 AMS64_17260 857be4b663f52d49ce097b3ea8182998 394 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 390 1.2E-96 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AMS64_00185 7e005e4055469ca5b4bdeff87f9a0b26 553 SUPERFAMILY SSF55781 224 342 5.89E-7 T 11-10-2018 AMS64_00185 7e005e4055469ca5b4bdeff87f9a0b26 553 Gene3D G3DSA:3.30.565.10 408 551 7.5E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_00185 7e005e4055469ca5b4bdeff87f9a0b26 553 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 452 548 5.5E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00185 7e005e4055469ca5b4bdeff87f9a0b26 553 Pfam PF06580 Histidine kinase 356 434 2.7E-26 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AMS64_00185 7e005e4055469ca5b4bdeff87f9a0b26 553 Pfam PF07694 5TMR of 5TMR-LYT 29 189 7.4E-37 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AMS64_00185 7e005e4055469ca5b4bdeff87f9a0b26 553 Gene3D G3DSA:1.10.1760.20 40 190 6.4E-6 T 11-10-2018 AMS64_00185 7e005e4055469ca5b4bdeff87f9a0b26 553 Gene3D G3DSA:3.30.450.40 224 357 2.1E-5 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_00185 7e005e4055469ca5b4bdeff87f9a0b26 553 SMART SM00387 447 549 1.9E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00185 7e005e4055469ca5b4bdeff87f9a0b26 553 SUPERFAMILY SSF55874 410 546 4.85E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_01740 81abd520a23eed9f2307be18c43899af 611 SUPERFAMILY SSF52540 208 461 1.68E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01740 81abd520a23eed9f2307be18c43899af 611 Pfam PF00271 Helicase conserved C-terminal domain 228 333 2.1E-20 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_01740 81abd520a23eed9f2307be18c43899af 611 Pfam PF09382 RQC domain 409 519 1.6E-40 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AMS64_01740 81abd520a23eed9f2307be18c43899af 611 Pfam PF16124 RecQ zinc-binding 346 407 1.6E-16 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMS64_01740 81abd520a23eed9f2307be18c43899af 611 SUPERFAMILY SSF52540 13 204 4.29E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01740 81abd520a23eed9f2307be18c43899af 611 Gene3D G3DSA:3.40.50.300 12 211 5.0E-79 T 11-10-2018 AMS64_01740 81abd520a23eed9f2307be18c43899af 611 SMART SM00487 25 221 7.0E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_01740 81abd520a23eed9f2307be18c43899af 611 SUPERFAMILY SSF47819 535 610 3.49E-27 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AMS64_01740 81abd520a23eed9f2307be18c43899af 611 Gene3D G3DSA:3.40.50.300 212 343 5.6E-45 T 11-10-2018 AMS64_01740 81abd520a23eed9f2307be18c43899af 611 Pfam PF00270 DEAD/DEAH box helicase 31 189 4.4E-18 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_01740 81abd520a23eed9f2307be18c43899af 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 19 606 5.8E-251 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AMS64_01740 81abd520a23eed9f2307be18c43899af 611 SMART SM00956 414 517 2.2E-55 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AMS64_01740 81abd520a23eed9f2307be18c43899af 611 Pfam PF00570 HRDC domain 539 605 6.5E-24 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMS64_01740 81abd520a23eed9f2307be18c43899af 611 SMART SM00341 535 611 1.6E-22 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMS64_01740 81abd520a23eed9f2307be18c43899af 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 467 2.5E-180 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AMS64_01740 81abd520a23eed9f2307be18c43899af 611 Gene3D G3DSA:1.10.150.80 532 611 1.0E-27 T 11-10-2018 AMS64_01740 81abd520a23eed9f2307be18c43899af 611 SMART SM00490 253 334 1.8E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_01740 81abd520a23eed9f2307be18c43899af 611 Gene3D G3DSA:1.10.10.10 344 525 1.1E-54 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_10250 faf37fb4432861fc75cf3740325766b8 623 Pfam PF00361 Proton-conducting membrane transporter 125 410 9.7E-50 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10250 faf37fb4432861fc75cf3740325766b8 623 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 99 4.3E-6 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10250 faf37fb4432861fc75cf3740325766b8 623 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 357 379 2.2E-6 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMS64_10250 faf37fb4432861fc75cf3740325766b8 623 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 74 94 2.2E-6 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMS64_10250 faf37fb4432861fc75cf3740325766b8 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 72 97 1.5E-11 T 11-10-2018 AMS64_10250 faf37fb4432861fc75cf3740325766b8 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 231 257 1.5E-11 T 11-10-2018 AMS64_10250 faf37fb4432861fc75cf3740325766b8 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 102 122 1.5E-11 T 11-10-2018 AMS64_10250 faf37fb4432861fc75cf3740325766b8 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 301 313 1.5E-11 T 11-10-2018 AMS64_10250 faf37fb4432861fc75cf3740325766b8 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 146 167 1.5E-11 T 11-10-2018 AMS64_10250 faf37fb4432861fc75cf3740325766b8 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 209 230 1.5E-11 T 11-10-2018 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 Pfam PF01336 OB-fold nucleic acid binding domain 19 101 1.4E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 473 489 1.2E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 517 531 1.2E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 583 33.122 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 SUPERFAMILY SSF55261 289 419 4.14E-46 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 Gene3D G3DSA:3.30.930.10 117 580 2.7E-194 T 11-10-2018 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 Gene3D G3DSA:3.30.1360.30 271 420 2.7E-194 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 SUPERFAMILY SSF55681 108 580 7.08E-106 T 11-10-2018 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 557 1.7E-105 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 Pfam PF02938 GAD domain 307 406 2.3E-32 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 2.5E-260 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 Gene3D G3DSA:2.40.50.140 1 106 5.5E-35 T 11-10-2018 AMS64_12785 81bd7cfbeea7111b4da174713a1706bc 588 SUPERFAMILY SSF50249 1 105 4.0E-34 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_18210 4a167dce5d5d08fc69901b521bd57fbe 280 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 59 83 1.5E-5 T 11-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AMS64_18210 4a167dce5d5d08fc69901b521bd57fbe 280 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 178 201 1.5E-5 T 11-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AMS64_18210 4a167dce5d5d08fc69901b521bd57fbe 280 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 256 279 1.5E-5 T 11-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AMS64_18210 4a167dce5d5d08fc69901b521bd57fbe 280 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 280 4.1E-98 T 11-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AMS64_18210 4a167dce5d5d08fc69901b521bd57fbe 280 Gene3D G3DSA:2.40.230.20 25 280 5.1E-84 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 AMS64_18210 4a167dce5d5d08fc69901b521bd57fbe 280 SUPERFAMILY SSF111364 32 280 4.05E-80 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 AMS64_17885 229a4e5ce04535d2333ac13361699e49 175 Pfam PF10263 SprT-like family 17 122 3.4E-16 T 11-10-2018 IPR006640 SprT-like AMS64_17885 229a4e5ce04535d2333ac13361699e49 175 Hamap MF_00746 Protein SprT [sprT]. 10 169 37.346 T 11-10-2018 IPR023483 Uncharacterised protein family SprT AMS64_17885 229a4e5ce04535d2333ac13361699e49 175 SMART SM00731 14 169 1.1E-41 T 11-10-2018 IPR006640 SprT-like AMS64_17885 229a4e5ce04535d2333ac13361699e49 175 Pfam PF17283 SprT-like zinc ribbon domain 133 166 1.8E-8 T 11-10-2018 IPR035240 SprT-like, zinc ribbon domain AMS64_07160 5a08040d00767ba5ab0bc54c50ce6e7a 584 Pfam PF00037 4Fe-4S binding domain 478 498 6.2E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_07160 5a08040d00767ba5ab0bc54c50ce6e7a 584 Gene3D G3DSA:3.30.70.20 447 548 1.4E-10 T 11-10-2018 AMS64_07160 5a08040d00767ba5ab0bc54c50ce6e7a 584 SUPERFAMILY SSF54862 196 541 2.98E-37 T 11-10-2018 AMS64_07160 5a08040d00767ba5ab0bc54c50ce6e7a 584 Gene3D G3DSA:3.30.70.20 219 277 6.2E-13 T 11-10-2018 AMS64_07160 5a08040d00767ba5ab0bc54c50ce6e7a 584 Pfam PF12838 4Fe-4S dicluster domain 223 264 1.3E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_07160 5a08040d00767ba5ab0bc54c50ce6e7a 584 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 483 494 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_14565 058f62053483faa922f5c24d2e9ec10f 485 SMART SM00471 302 437 1.5E-4 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_14565 058f62053483faa922f5c24d2e9ec10f 485 Pfam PF13487 HD domain 358 419 2.1E-20 T 11-10-2018 AMS64_14565 058f62053483faa922f5c24d2e9ec10f 485 SMART SM00091 163 229 1.9E-5 T 11-10-2018 IPR000014 PAS domain AMS64_14565 058f62053483faa922f5c24d2e9ec10f 485 Gene3D G3DSA:1.10.3210.10 283 469 4.8E-56 T 11-10-2018 AMS64_14565 058f62053483faa922f5c24d2e9ec10f 485 Pfam PF08448 PAS fold 169 278 3.5E-14 T 11-10-2018 IPR013656 PAS fold-4 AMS64_14565 058f62053483faa922f5c24d2e9ec10f 485 Gene3D G3DSA:3.30.450.20 152 282 5.2E-17 T 11-10-2018 AMS64_14565 058f62053483faa922f5c24d2e9ec10f 485 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 167 282 2.7E-12 T 11-10-2018 IPR000014 PAS domain AMS64_14565 058f62053483faa922f5c24d2e9ec10f 485 SUPERFAMILY SSF55785 153 275 1.06E-17 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_14565 058f62053483faa922f5c24d2e9ec10f 485 SUPERFAMILY SSF109604 284 464 8.57E-29 T 11-10-2018 AMS64_17395 5516754979c0e742cd84f51754056ae7 446 Gene3D G3DSA:1.20.1740.10 5 446 7.0E-64 T 11-10-2018 AMS64_17395 5516754979c0e742cd84f51754056ae7 446 PIRSF PIRSF006060 1 445 1.1E-65 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_17395 5516754979c0e742cd84f51754056ae7 446 Pfam PF13520 Amino acid permease 11 421 6.8E-49 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_13170 71ea89ede161809f8ef88263eb4c0dea 318 Pfam PF03734 L,D-transpeptidase catalytic domain 105 241 8.3E-20 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMS64_13170 71ea89ede161809f8ef88263eb4c0dea 318 Gene3D G3DSA:2.40.440.10 29 312 2.5E-81 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMS64_13170 71ea89ede161809f8ef88263eb4c0dea 318 SUPERFAMILY SSF141523 102 241 5.62E-30 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.8E-71 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.323 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 Gene3D G3DSA:3.90.930.12 1 82 2.3E-27 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 SUPERFAMILY SSF56053 83 177 6.02E-35 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 Gene3D G3DSA:3.90.930.12 83 177 4.1E-39 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.2E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.2E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.2E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 PIRSF PIRSF002162 1 177 2.6E-42 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 SUPERFAMILY SSF56053 1 82 6.41E-23 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 Pfam PF00347 Ribosomal protein L6 90 164 6.7E-20 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 Pfam PF00347 Ribosomal protein L6 11 82 6.6E-18 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02035 2d4019be6fcc30eee700bddddda15dc2 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_15165 a6bd4ee1d47726188821f559ab48706b 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 334 2.0E-65 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_15165 a6bd4ee1d47726188821f559ab48706b 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.7E-7 T 11-10-2018 AMS64_15165 a6bd4ee1d47726188821f559ab48706b 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.7E-7 T 11-10-2018 AMS64_15165 a6bd4ee1d47726188821f559ab48706b 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.7E-7 T 11-10-2018 AMS64_15165 a6bd4ee1d47726188821f559ab48706b 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 5.6E-13 T 11-10-2018 AMS64_15165 a6bd4ee1d47726188821f559ab48706b 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.6E-13 T 11-10-2018 AMS64_15165 a6bd4ee1d47726188821f559ab48706b 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 5.6E-13 T 11-10-2018 AMS64_15165 a6bd4ee1d47726188821f559ab48706b 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 5.6E-13 T 11-10-2018 AMS64_15165 a6bd4ee1d47726188821f559ab48706b 430 SUPERFAMILY SSF51905 2 337 1.85E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_15165 a6bd4ee1d47726188821f559ab48706b 430 Gene3D G3DSA:3.50.50.100 1 406 5.1E-116 T 11-10-2018 AMS64_11835 5a36e91013101fcaec0517fdc767b110 75 Gene3D G3DSA:2.30.30.90 4 75 7.0E-20 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain AMS64_11835 5a36e91013101fcaec0517fdc767b110 75 SUPERFAMILY SSF50037 5 74 1.92E-17 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal AMS64_11835 5a36e91013101fcaec0517fdc767b110 75 Pfam PF04023 FeoA domain 1 74 4.0E-15 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMS64_11835 5a36e91013101fcaec0517fdc767b110 75 SMART SM00899 1 74 2.5E-19 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMS64_06255 5fdc8293ff40b65cff954ae246750174 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 92 5.2E-23 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMS64_06255 5fdc8293ff40b65cff954ae246750174 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 299 57.745 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AMS64_06255 5fdc8293ff40b65cff954ae246750174 299 Gene3D G3DSA:1.10.150.130 7 100 1.3E-22 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_06255 5fdc8293ff40b65cff954ae246750174 299 Gene3D G3DSA:1.10.443.10 113 292 2.2E-72 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_06255 5fdc8293ff40b65cff954ae246750174 299 SUPERFAMILY SSF47823 6 102 5.3E-36 T 11-10-2018 AMS64_06255 5fdc8293ff40b65cff954ae246750174 299 SUPERFAMILY SSF56349 108 296 1.12E-57 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_06255 5fdc8293ff40b65cff954ae246750174 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 6 299 63.479 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AMS64_06255 5fdc8293ff40b65cff954ae246750174 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 12 299 1.4E-119 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AMS64_06255 5fdc8293ff40b65cff954ae246750174 299 Pfam PF00589 Phage integrase family 115 285 3.4E-54 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_09865 4a1e3050a6047bba2c62cb1d7b07af84 329 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 3 307 4.8E-104 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AMS64_09865 4a1e3050a6047bba2c62cb1d7b07af84 329 Pfam PF00294 pfkB family carbohydrate kinase 10 290 1.3E-52 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AMS64_09865 4a1e3050a6047bba2c62cb1d7b07af84 329 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 37 61 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMS64_09865 4a1e3050a6047bba2c62cb1d7b07af84 329 SUPERFAMILY SSF53613 3 288 3.74E-68 T 11-10-2018 IPR029056 Ribokinase-like AMS64_09865 4a1e3050a6047bba2c62cb1d7b07af84 329 PIRSF PIRSF000535 1 309 2.5E-95 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AMS64_09865 4a1e3050a6047bba2c62cb1d7b07af84 329 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 3 307 1.2E-103 T 11-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AMS64_09865 4a1e3050a6047bba2c62cb1d7b07af84 329 Gene3D G3DSA:3.40.1190.20 2 314 1.9E-96 T 11-10-2018 IPR029056 Ribokinase-like AMS64_09865 4a1e3050a6047bba2c62cb1d7b07af84 329 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 Pfam PF00842 Alanine racemase, C-terminal domain 279 388 1.9E-32 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 SUPERFAMILY SSF51419 46 269 3.05E-46 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 Hamap MF_01201 Alanine racemase. 39 407 25.311 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 TIGRFAM TIGR00492 alr: alanine racemase 42 379 4.1E-66 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 Gene3D G3DSA:2.40.37.10 42 403 8.6E-151 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 71 81 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 Pfam PF01168 Alanine racemase, N-terminal domain 46 269 4.0E-47 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 Gene3D G3DSA:3.20.20.10 48 266 8.6E-151 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 SMART SM01005 279 407 1.0E-48 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 SUPERFAMILY SSF50621 272 406 1.22E-40 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 PRINTS PR00992 Alanine racemase signature 66 82 9.3E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 PRINTS PR00992 Alanine racemase signature 312 327 9.3E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 PRINTS PR00992 Alanine racemase signature 164 176 9.3E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 PRINTS PR00992 Alanine racemase signature 200 211 9.3E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 PRINTS PR00992 Alanine racemase signature 333 350 9.3E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 PRINTS PR00992 Alanine racemase signature 295 310 9.3E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 PRINTS PR00992 Alanine racemase signature 102 120 9.3E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_12735 e6e3a92b5b06f1f2d33092b86e77eab3 408 PRINTS PR00992 Alanine racemase signature 243 270 9.3E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 Gene3D G3DSA:3.30.390.30 346 467 2.6E-44 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 Gene3D G3DSA:3.50.50.60 150 271 6.0E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.3E-34 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 Gene3D G3DSA:3.50.50.60 9 332 6.0E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 9.9E-41 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 9.9E-41 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 9.9E-41 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 9.9E-41 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 9.9E-41 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.3E-63 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 4.2E-148 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PIRSF PIRSF000350 1 469 5.3E-85 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 SUPERFAMILY SSF51905 3 338 2.66E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.1E-70 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.1E-70 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.1E-70 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.1E-70 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.1E-70 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.1E-70 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.1E-70 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.1E-70 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.1E-70 T 11-10-2018 AMS64_03360 1a332425d0eb9acd9d1e782de3b026c4 475 SUPERFAMILY SSF55424 345 461 8.08E-39 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMS64_07365 4103c027cb6d41755698b8adca478724 474 Pfam PF00448 SRP54-type protein, GTPase domain 258 446 1.5E-40 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMS64_07365 4103c027cb6d41755698b8adca478724 474 SMART SM00962 255 448 1.4E-68 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMS64_07365 4103c027cb6d41755698b8adca478724 474 Gene3D G3DSA:1.20.120.1380 228 439 2.7E-61 T 11-10-2018 AMS64_07365 4103c027cb6d41755698b8adca478724 474 Gene3D G3DSA:3.40.50.300 250 436 2.7E-61 T 11-10-2018 AMS64_07365 4103c027cb6d41755698b8adca478724 474 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 343 2.0E-88 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 AMS64_07365 4103c027cb6d41755698b8adca478724 474 SUPERFAMILY SSF52540 251 445 2.01E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07365 4103c027cb6d41755698b8adca478724 474 SMART SM00382 254 395 2.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_05035 eeb2b8866765973bfa487c4f7b02fc1a 137 Gene3D G3DSA:3.10.580.10 1 136 2.0E-36 T 11-10-2018 AMS64_05035 eeb2b8866765973bfa487c4f7b02fc1a 137 SMART SM00116 10 57 3.0E-7 T 11-10-2018 IPR000644 CBS domain AMS64_05035 eeb2b8866765973bfa487c4f7b02fc1a 137 SMART SM00116 84 131 2.8E-9 T 11-10-2018 IPR000644 CBS domain AMS64_05035 eeb2b8866765973bfa487c4f7b02fc1a 137 Pfam PF00571 CBS domain 78 130 4.6E-13 T 11-10-2018 IPR000644 CBS domain AMS64_05035 eeb2b8866765973bfa487c4f7b02fc1a 137 Pfam PF00571 CBS domain 3 57 1.7E-11 T 11-10-2018 IPR000644 CBS domain AMS64_05035 eeb2b8866765973bfa487c4f7b02fc1a 137 SUPERFAMILY SSF54631 1 131 1.64E-30 T 11-10-2018 AMS64_05710 edcc272e13c8deef9ff4704581c7eab6 328 Pfam PF00561 alpha/beta hydrolase fold 60 300 2.5E-20 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_05710 edcc272e13c8deef9ff4704581c7eab6 328 SUPERFAMILY SSF53474 29 318 3.13E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_05710 edcc272e13c8deef9ff4704581c7eab6 328 PIRSF PIRSF005211 1 328 1.2E-100 T 11-10-2018 IPR012020 AB hydrolase 4 family AMS64_05710 edcc272e13c8deef9ff4704581c7eab6 328 Gene3D G3DSA:3.40.50.1820 55 321 2.4E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_04150 2606185b696fe75a517dfd74c7f9bbd7 312 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 311 2.0E-61 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMS64_04150 2606185b696fe75a517dfd74c7f9bbd7 312 Gene3D G3DSA:3.40.50.1980 202 312 6.7E-37 T 11-10-2018 AMS64_04150 2606185b696fe75a517dfd74c7f9bbd7 312 SUPERFAMILY SSF53807 20 311 3.14E-80 T 11-10-2018 AMS64_04150 2606185b696fe75a517dfd74c7f9bbd7 312 Gene3D G3DSA:3.40.50.1980 21 201 2.9E-54 T 11-10-2018 AMS64_13345 629988fedc4b9c30d0517194b86b17ff 102 Gene3D G3DSA:3.40.30.10 2 102 5.1E-41 T 11-10-2018 AMS64_13345 629988fedc4b9c30d0517194b86b17ff 102 Pfam PF10262 Rdx family 12 85 2.3E-30 T 11-10-2018 IPR011893 Selenoprotein, Rdx-type AMS64_13345 629988fedc4b9c30d0517194b86b17ff 102 SUPERFAMILY SSF52833 10 94 4.03E-27 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_13345 629988fedc4b9c30d0517194b86b17ff 102 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 13 84 5.2E-19 T 11-10-2018 IPR011893 Selenoprotein, Rdx-type AMS64_20475 5cc300960db03b70f66d5f652b0c10d0 438 Gene3D G3DSA:3.60.10.10 167 435 8.0E-58 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMS64_20475 5cc300960db03b70f66d5f652b0c10d0 438 SUPERFAMILY SSF56219 172 436 9.81E-59 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMS64_20475 5cc300960db03b70f66d5f652b0c10d0 438 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 177 397 1.0E-10 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMS64_16585 a32dcc8edae43cb40d5c1175f10f5dd3 341 Pfam PF00953 Glycosyl transferase family 4 80 231 7.1E-36 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AMS64_03670 975e0b20dc9c0fb53eb3772fa401980b 218 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 215 5.3E-58 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_03670 975e0b20dc9c0fb53eb3772fa401980b 218 Gene3D G3DSA:3.30.2350.10 3 215 2.5E-69 T 11-10-2018 AMS64_03670 975e0b20dc9c0fb53eb3772fa401980b 218 Pfam PF00849 RNA pseudouridylate synthase 20 165 1.8E-26 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_03670 975e0b20dc9c0fb53eb3772fa401980b 218 SUPERFAMILY SSF55120 6 215 3.36E-63 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_05500 5b1dd0df2490c79670ba90d52261df2e 245 Gene3D G3DSA:3.20.20.70 1 243 9.2E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_05500 5b1dd0df2490c79670ba90d52261df2e 245 SUPERFAMILY SSF63892 4 242 1.96E-100 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AMS64_05500 5b1dd0df2490c79670ba90d52261df2e 245 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 2.2E-101 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AMS64_05500 5b1dd0df2490c79670ba90d52261df2e 245 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.047 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AMS64_05500 5b1dd0df2490c79670ba90d52261df2e 245 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 4.4E-103 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AMS64_20720 2a8b3472636781e84d0691b5f24c75d7 390 PIRSF PIRSF001434 1 383 3.8E-135 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMS64_20720 2a8b3472636781e84d0691b5f24c75d7 390 SUPERFAMILY SSF53383 16 381 4.03E-115 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_20720 2a8b3472636781e84d0691b5f24c75d7 390 Gene3D G3DSA:3.90.1150.10 247 385 1.3E-51 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_20720 2a8b3472636781e84d0691b5f24c75d7 390 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 380 3.8E-139 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMS64_20720 2a8b3472636781e84d0691b5f24c75d7 390 Gene3D G3DSA:3.40.640.10 2 246 2.6E-85 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_20720 2a8b3472636781e84d0691b5f24c75d7 390 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 189 203 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMS64_20720 2a8b3472636781e84d0691b5f24c75d7 390 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 381 3.4E-192 T 11-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 AMS64_09985 e2ff3ad2cdcbe23af41dd0fdf28437f0 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 1.2E-73 T 11-10-2018 IPR010650 PrkA C-terminal domain AMS64_09985 e2ff3ad2cdcbe23af41dd0fdf28437f0 640 Pfam PF08298 PrkA AAA domain 20 376 7.1E-173 T 11-10-2018 IPR013153 PrkA AAA domain AMS64_09985 e2ff3ad2cdcbe23af41dd0fdf28437f0 640 SMART SM00763 19 376 5.5E-209 T 11-10-2018 IPR013153 PrkA AAA domain AMS64_09985 e2ff3ad2cdcbe23af41dd0fdf28437f0 640 PIRSF PIRSF000549 1 640 1.7E-288 T 11-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 AMS64_09985 e2ff3ad2cdcbe23af41dd0fdf28437f0 640 SUPERFAMILY SSF52540 75 364 4.05E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19080 91684adc02494d11b47b9b2e065c7971 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 65 169 6.6E-22 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMS64_17315 f30052d67ac4a01eb74fe92c584df47f 393 Gene3D G3DSA:3.40.630.10 105 392 5.6E-87 T 11-10-2018 AMS64_17315 f30052d67ac4a01eb74fe92c584df47f 393 SUPERFAMILY SSF53187 108 389 6.56E-67 T 11-10-2018 AMS64_17315 f30052d67ac4a01eb74fe92c584df47f 393 PIRSF PIRSF036685 1 393 7.4E-204 T 11-10-2018 IPR012189 Peptidase M28E, aminopeptidase AP1 AMS64_17315 f30052d67ac4a01eb74fe92c584df47f 393 Pfam PF04389 Peptidase family M28 181 376 1.1E-38 T 11-10-2018 IPR007484 Peptidase M28 AMS64_14155 ad24de84bbd6119e62ced27c753bfd54 410 Pfam PF13356 Arm DNA-binding domain 10 102 9.2E-15 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AMS64_14155 ad24de84bbd6119e62ced27c753bfd54 410 Gene3D G3DSA:3.30.160.390 9 103 3.1E-13 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AMS64_14155 ad24de84bbd6119e62ced27c753bfd54 410 Gene3D G3DSA:1.10.150.130 104 210 1.1E-14 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_14155 ad24de84bbd6119e62ced27c753bfd54 410 Gene3D G3DSA:1.10.443.10 211 385 2.1E-34 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_14155 ad24de84bbd6119e62ced27c753bfd54 410 Pfam PF00589 Phage integrase family 212 372 2.5E-23 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_14155 ad24de84bbd6119e62ced27c753bfd54 410 SUPERFAMILY SSF56349 108 377 6.36E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 61 81 9.3E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 61 9.3E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 81 100 9.3E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 214 239 9.3E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 169 189 9.3E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 190 211 9.3E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 Pfam PF00813 FliP family 45 236 1.7E-76 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 169 184 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 100 112 4.6E-16 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 140 152 4.6E-16 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 230 240 4.6E-16 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 112 126 4.6E-16 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 162 174 4.6E-16 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 40 49 4.6E-16 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 217 229 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMS64_03010 46e12666563e47bf1da35681e154e5d6 244 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 44 240 1.9E-77 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMS64_00915 40aa9fb11bc19a297b1bb0213b084413 412 Gene3D G3DSA:3.40.190.10 21 368 1.2E-144 T 11-10-2018 AMS64_00915 40aa9fb11bc19a297b1bb0213b084413 412 Gene3D G3DSA:3.40.190.10 136 393 1.2E-144 T 11-10-2018 AMS64_00915 40aa9fb11bc19a297b1bb0213b084413 412 SUPERFAMILY SSF53850 17 407 1.6E-48 T 11-10-2018 AMS64_00915 40aa9fb11bc19a297b1bb0213b084413 412 Pfam PF01547 Bacterial extracellular solute-binding protein 41 283 9.4E-15 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMS64_12145 1fb523643972b7c6248e1e3131ced161 114 ProDom PD394905 PM1122 UNCHARACTERIZED 13 87 1.0E-14 T 11-10-2018 AMS64_02250 a6dc580c6659528b2519beecdc3d7078 208 SUPERFAMILY SSF52833 1 77 3.93E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_02250 a6dc580c6659528b2519beecdc3d7078 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 192 5.0E-12 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMS64_02250 a6dc580c6659528b2519beecdc3d7078 208 Gene3D G3DSA:3.40.30.10 1 83 4.4E-34 T 11-10-2018 AMS64_02250 a6dc580c6659528b2519beecdc3d7078 208 Gene3D G3DSA:1.20.1050.10 84 198 2.2E-32 T 11-10-2018 AMS64_02250 a6dc580c6659528b2519beecdc3d7078 208 SUPERFAMILY SSF47616 81 200 1.29E-23 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMS64_02250 a6dc580c6659528b2519beecdc3d7078 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 6.0E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 Gene3D G3DSA:1.20.120.620 376 481 9.1E-22 T 11-10-2018 IPR038318 KdpD, transmembrane domain superfamily AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 Gene3D G3DSA:3.30.450.40 491 624 6.2E-9 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 Pfam PF13493 Domain of unknown function (DUF4118) 382 481 8.6E-21 T 11-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 Gene3D G3DSA:1.10.287.130 625 699 6.3E-16 T 11-10-2018 AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 SUPERFAMILY SSF55874 691 856 3.41E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 Gene3D G3DSA:3.30.565.10 702 859 4.0E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 19 227 2.6E-92 T 11-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 782 796 2.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 841 854 2.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 816 834 2.1E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 SUPERFAMILY SSF47384 627 701 1.08E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 Gene3D G3DSA:3.40.50.300 16 226 2.2E-96 T 11-10-2018 AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 750 856 2.0E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 SMART SM00388 633 701 1.1E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 SMART SM00387 745 857 1.4E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00355 ba360512e8d3da4033adaa6efef36239 862 Pfam PF00512 His Kinase A (phospho-acceptor) domain 634 700 1.1E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_13965 797a50d712999433e64c997cc193dc8c 400 PRINTS PR01182 Ornithine decarboxylase signature 53 80 6.4E-7 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMS64_13965 797a50d712999433e64c997cc193dc8c 400 PRINTS PR01182 Ornithine decarboxylase signature 96 120 6.4E-7 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMS64_13965 797a50d712999433e64c997cc193dc8c 400 PRINTS PR01182 Ornithine decarboxylase signature 365 378 6.4E-7 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMS64_13965 797a50d712999433e64c997cc193dc8c 400 Gene3D G3DSA:2.40.37.10 264 399 1.4E-40 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMS64_13965 797a50d712999433e64c997cc193dc8c 400 SUPERFAMILY SSF51419 32 285 6.69E-59 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_13965 797a50d712999433e64c997cc193dc8c 400 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 283 378 9.1E-14 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AMS64_13965 797a50d712999433e64c997cc193dc8c 400 Gene3D G3DSA:3.20.20.10 34 263 2.4E-44 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_13965 797a50d712999433e64c997cc193dc8c 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 187 200 5.1E-8 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_13965 797a50d712999433e64c997cc193dc8c 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 55 73 5.1E-8 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_13965 797a50d712999433e64c997cc193dc8c 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 5.1E-8 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_13965 797a50d712999433e64c997cc193dc8c 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 75 87 5.1E-8 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_13965 797a50d712999433e64c997cc193dc8c 400 SUPERFAMILY SSF50621 246 398 1.28E-34 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMS64_13965 797a50d712999433e64c997cc193dc8c 400 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 282 1.4E-29 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AMS64_04195 4a29046da47890b0d16c6104bc292fbd 532 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 503 3.7E-152 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AMS64_04195 4a29046da47890b0d16c6104bc292fbd 532 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 503 1.3E-191 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AMS64_06160 ab490afda17ee04f1360d0b0d34d02d4 387 Pfam PF13538 UvrD-like helicase C-terminal domain 308 354 6.1E-12 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain AMS64_06160 ab490afda17ee04f1360d0b0d34d02d4 387 SUPERFAMILY SSF52540 10 357 3.32E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_06160 ab490afda17ee04f1360d0b0d34d02d4 387 Gene3D G3DSA:3.40.50.300 193 380 1.5E-16 T 11-10-2018 AMS64_06160 ab490afda17ee04f1360d0b0d34d02d4 387 Gene3D G3DSA:3.40.50.300 7 189 1.3E-24 T 11-10-2018 AMS64_06160 ab490afda17ee04f1360d0b0d34d02d4 387 Pfam PF13245 AAA domain 25 174 5.0E-12 T 11-10-2018 AMS64_01255 cc2434f9eecbb2a84890b57151ad003f 453 Pfam PF01554 MatE 24 184 3.9E-23 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_01255 cc2434f9eecbb2a84890b57151ad003f 453 Pfam PF01554 MatE 251 391 8.6E-16 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_01255 cc2434f9eecbb2a84890b57151ad003f 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 421 1.2E-74 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_20670 e23ce38bc3506229c4e697b425c2bcfc 196 SMART SM01266 5 59 4.2E-8 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMS64_20670 e23ce38bc3506229c4e697b425c2bcfc 196 SUPERFAMILY SSF51161 13 190 1.66E-49 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_20670 e23ce38bc3506229c4e697b425c2bcfc 196 Gene3D G3DSA:2.160.10.10 1 192 1.1E-63 T 11-10-2018 AMS64_20670 e23ce38bc3506229c4e697b425c2bcfc 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 2.9E-11 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_20670 e23ce38bc3506229c4e697b425c2bcfc 196 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMS64_20670 e23ce38bc3506229c4e697b425c2bcfc 196 Pfam PF12464 Maltose acetyltransferase 15 57 5.7E-6 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMS64_04445 0ff00daeea011cd4012edb92ae006064 202 Pfam PF01810 LysE type translocator 14 200 3.2E-37 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMS64_04445 0ff00daeea011cd4012edb92ae006064 202 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 8.1E-70 T 11-10-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 AMS64_10495 60278970cd0be8ced33e6e2a048c8ddc 113 Gene3D G3DSA:3.30.750.24 2 106 4.6E-20 T 11-10-2018 IPR036513 STAS domain superfamily AMS64_10495 60278970cd0be8ced33e6e2a048c8ddc 113 SUPERFAMILY SSF52091 3 101 1.0E-19 T 11-10-2018 IPR036513 STAS domain superfamily AMS64_10495 60278970cd0be8ced33e6e2a048c8ddc 113 Pfam PF01740 STAS domain 36 99 4.6E-10 T 11-10-2018 IPR002645 STAS domain AMS64_19390 cfb88ed35abc142fca1d66ace57c0344 323 SUPERFAMILY SSF48576 6 322 6.77E-103 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMS64_19390 cfb88ed35abc142fca1d66ace57c0344 323 Gene3D G3DSA:1.10.600.10 1 323 5.6E-119 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMS64_19390 cfb88ed35abc142fca1d66ace57c0344 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMS64_19390 cfb88ed35abc142fca1d66ace57c0344 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMS64_19390 cfb88ed35abc142fca1d66ace57c0344 323 Pfam PF00348 Polyprenyl synthetase 32 271 8.9E-79 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AMS64_05920 2e9646482648459a40cb4610463edb3a 864 Gene3D G3DSA:3.10.50.10 442 517 3.0E-165 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AMS64_05920 2e9646482648459a40cb4610463edb3a 864 SUPERFAMILY SSF54556 443 515 2.68E-19 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AMS64_05920 2e9646482648459a40cb4610463edb3a 864 Gene3D G3DSA:3.20.20.80 157 549 3.0E-165 T 11-10-2018 AMS64_05920 2e9646482648459a40cb4610463edb3a 864 Gene3D G3DSA:2.10.10.20 770 811 3.5E-13 T 11-10-2018 AMS64_05920 2e9646482648459a40cb4610463edb3a 864 SUPERFAMILY SSF51055 818 860 6.15E-12 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_05920 2e9646482648459a40cb4610463edb3a 864 Gene3D G3DSA:2.10.10.20 816 862 8.6E-13 T 11-10-2018 AMS64_05920 2e9646482648459a40cb4610463edb3a 864 SMART SM00089 61 132 1.2E-4 T 11-10-2018 IPR022409 PKD/Chitinase domain AMS64_05920 2e9646482648459a40cb4610463edb3a 864 SMART SM00089 667 753 2.1E-4 T 11-10-2018 IPR022409 PKD/Chitinase domain AMS64_05920 2e9646482648459a40cb4610463edb3a 864 Pfam PF08329 Chitinase A, N-terminal domain 23 154 2.1E-60 T 11-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMS64_05920 2e9646482648459a40cb4610463edb3a 864 SMART SM00636 157 543 9.3E-162 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AMS64_05920 2e9646482648459a40cb4610463edb3a 864 SMART SM00495 769 812 6.0E-12 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_05920 2e9646482648459a40cb4610463edb3a 864 SMART SM00495 816 858 5.4E-11 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_05920 2e9646482648459a40cb4610463edb3a 864 SUPERFAMILY SSF51055 765 814 7.06E-12 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMS64_05920 2e9646482648459a40cb4610463edb3a 864 Gene3D G3DSA:2.60.40.10 7 129 1.1E-46 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_05920 2e9646482648459a40cb4610463edb3a 864 SUPERFAMILY SSF51445 133 557 3.0E-104 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_05920 2e9646482648459a40cb4610463edb3a 864 SUPERFAMILY SSF81296 24 131 1.96E-36 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_05920 2e9646482648459a40cb4610463edb3a 864 Gene3D G3DSA:2.60.40.10 567 661 2.8E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_05920 2e9646482648459a40cb4610463edb3a 864 Gene3D G3DSA:2.60.40.10 662 761 4.4E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_05920 2e9646482648459a40cb4610463edb3a 864 ProSitePatterns PS01095 Chitinases family 18 active site. 306 314 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMS64_05920 2e9646482648459a40cb4610463edb3a 864 Pfam PF00704 Glycosyl hydrolases family 18 159 543 1.7E-89 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AMS64_13980 4874a538d0bec134a39c77bd27b98bd3 133 SUPERFAMILY SSF81273 2 58 4.9E-15 T 11-10-2018 AMS64_13980 4874a538d0bec134a39c77bd27b98bd3 133 PIRSF PIRSF002096 1 133 7.1E-51 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AMS64_13980 4874a538d0bec134a39c77bd27b98bd3 133 Pfam PF00816 H-NS histone family 42 126 4.0E-18 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AMS64_13980 4874a538d0bec134a39c77bd27b98bd3 133 Gene3D G3DSA:4.10.430.10 91 133 2.0E-20 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 AMS64_13980 4874a538d0bec134a39c77bd27b98bd3 133 SMART SM00528 87 133 7.8E-20 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AMS64_13980 4874a538d0bec134a39c77bd27b98bd3 133 SUPERFAMILY SSF81273 90 133 3.02E-9 T 11-10-2018 AMS64_13980 4874a538d0bec134a39c77bd27b98bd3 133 Gene3D G3DSA:1.10.287.1050 1 83 6.8E-27 T 11-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 AMS64_12745 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 SMART SM00382 46 239 1.3E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_12745 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 2.3E-19 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_12745 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 5.1E-27 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_12745 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 SUPERFAMILY SSF52540 8 261 4.85E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_12745 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 Pfam PF00005 ABC transporter 38 189 6.9E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_12745 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_12745 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 Gene3D G3DSA:3.40.50.300 6 330 7.6E-96 T 11-10-2018 AMS64_11550 e4188f23681e3d667befadfb98622667 225 Hamap MF_00157 Ribonuclease T [rnt]. 1 225 119.055 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AMS64_11550 e4188f23681e3d667befadfb98622667 225 SUPERFAMILY SSF53098 7 205 2.86E-58 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_11550 e4188f23681e3d667befadfb98622667 225 Gene3D G3DSA:3.30.420.10 7 212 1.3E-57 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_11550 e4188f23681e3d667befadfb98622667 225 TIGRFAM TIGR01298 RNaseT: ribonuclease T 8 206 1.1E-107 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AMS64_11550 e4188f23681e3d667befadfb98622667 225 Pfam PF00929 Exonuclease 18 192 2.4E-41 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMS64_11550 e4188f23681e3d667befadfb98622667 225 SMART SM00479 16 201 2.2E-36 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMS64_03840 a00b42f8caaeeb603f06841917d4f71c 338 Gene3D G3DSA:2.30.30.40 40 158 6.0E-32 T 11-10-2018 AMS64_03840 a00b42f8caaeeb603f06841917d4f71c 338 Gene3D G3DSA:3.40.50.12740 196 319 2.1E-28 T 11-10-2018 AMS64_03840 a00b42f8caaeeb603f06841917d4f71c 338 Gene3D G3DSA:2.40.50.180 48 164 6.0E-32 T 11-10-2018 AMS64_03840 a00b42f8caaeeb603f06841917d4f71c 338 SMART SM00448 197 322 9.6E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_03840 a00b42f8caaeeb603f06841917d4f71c 338 Pfam PF01584 CheW-like domain 39 166 8.2E-33 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_03840 a00b42f8caaeeb603f06841917d4f71c 338 SUPERFAMILY SSF52172 195 313 1.99E-28 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_03840 a00b42f8caaeeb603f06841917d4f71c 338 PIRSF PIRSF002867 2 330 3.8E-111 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AMS64_03840 a00b42f8caaeeb603f06841917d4f71c 338 SUPERFAMILY SSF50341 12 169 4.58E-34 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMS64_03840 a00b42f8caaeeb603f06841917d4f71c 338 SMART SM00260 22 164 8.1E-27 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_03840 a00b42f8caaeeb603f06841917d4f71c 338 Pfam PF00072 Response regulator receiver domain 199 316 2.6E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_02200 88a917f997653406e8e6ae74a3f6a156 269 SUPERFAMILY SSF46785 23 91 7.39E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_02200 88a917f997653406e8e6ae74a3f6a156 269 SUPERFAMILY SSF64288 75 250 5.65E-39 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMS64_02200 88a917f997653406e8e6ae74a3f6a156 269 Pfam PF07702 UTRA domain 109 246 2.0E-30 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMS64_02200 88a917f997653406e8e6ae74a3f6a156 269 SMART SM00866 108 247 2.5E-30 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMS64_02200 88a917f997653406e8e6ae74a3f6a156 269 Gene3D G3DSA:3.40.1410.10 92 250 1.7E-32 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMS64_02200 88a917f997653406e8e6ae74a3f6a156 269 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 3.1E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_02200 88a917f997653406e8e6ae74a3f6a156 269 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 3.1E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_02200 88a917f997653406e8e6ae74a3f6a156 269 Gene3D G3DSA:1.10.10.10 23 91 6.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_02200 88a917f997653406e8e6ae74a3f6a156 269 SMART SM00345 28 87 3.6E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_02200 88a917f997653406e8e6ae74a3f6a156 269 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 87 7.8E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_16850 3de8147f5dcc5b09d96c9f0904f7f4c0 307 SUPERFAMILY SSF55174 5 97 5.0E-17 T 11-10-2018 AMS64_16850 3de8147f5dcc5b09d96c9f0904f7f4c0 307 Gene3D G3DSA:3.10.290.10 1 59 3.8E-22 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMS64_16850 3de8147f5dcc5b09d96c9f0904f7f4c0 307 SUPERFAMILY SSF55120 67 235 5.28E-43 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_16850 3de8147f5dcc5b09d96c9f0904f7f4c0 307 Gene3D G3DSA:3.30.70.1560 129 219 2.3E-52 T 11-10-2018 AMS64_16850 3de8147f5dcc5b09d96c9f0904f7f4c0 307 SMART SM00363 3 64 2.9E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_16850 3de8147f5dcc5b09d96c9f0904f7f4c0 307 Gene3D G3DSA:3.30.70.580 69 227 2.3E-52 T 11-10-2018 AMS64_16850 3de8147f5dcc5b09d96c9f0904f7f4c0 307 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMS64_16850 3de8147f5dcc5b09d96c9f0904f7f4c0 307 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 231 3.5E-61 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMS64_16850 3de8147f5dcc5b09d96c9f0904f7f4c0 307 Pfam PF00849 RNA pseudouridylate synthase 67 197 1.1E-17 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_16850 3de8147f5dcc5b09d96c9f0904f7f4c0 307 Pfam PF01479 S4 domain 4 48 2.0E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_18670 6537ce51442ef663064a435cd120927a 514 Pfam PF12833 Helix-turn-helix domain 119 197 5.2E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_18670 6537ce51442ef663064a435cd120927a 514 Gene3D G3DSA:3.30.310.20 218 334 7.0E-27 T 11-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily AMS64_18670 6537ce51442ef663064a435cd120927a 514 SUPERFAMILY SSF55945 218 315 5.02E-23 T 11-10-2018 AMS64_18670 6537ce51442ef663064a435cd120927a 514 Gene3D G3DSA:1.10.340.30 335 438 1.7E-22 T 11-10-2018 AMS64_18670 6537ce51442ef663064a435cd120927a 514 SMART SM00342 113 196 3.0E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_18670 6537ce51442ef663064a435cd120927a 514 SMART SM00478 344 489 2.0E-6 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMS64_18670 6537ce51442ef663064a435cd120927a 514 Gene3D G3DSA:3.40.10.10 13 88 9.1E-29 T 11-10-2018 IPR035451 Ada-like domain superfamily AMS64_18670 6537ce51442ef663064a435cd120927a 514 Pfam PF06029 AlkA N-terminal domain 218 334 1.6E-31 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AMS64_18670 6537ce51442ef663064a435cd120927a 514 Gene3D G3DSA:1.10.1670.10 441 494 3.9E-11 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AMS64_18670 6537ce51442ef663064a435cd120927a 514 SUPERFAMILY SSF57884 15 93 1.44E-30 T 11-10-2018 IPR035451 Ada-like domain superfamily AMS64_18670 6537ce51442ef663064a435cd120927a 514 SUPERFAMILY SSF48150 324 487 1.73E-32 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMS64_18670 6537ce51442ef663064a435cd120927a 514 Pfam PF02805 Metal binding domain of Ada 23 86 8.1E-28 T 11-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AMS64_18670 6537ce51442ef663064a435cd120927a 514 Gene3D G3DSA:1.10.10.60 96 202 2.8E-21 T 11-10-2018 AMS64_18670 6537ce51442ef663064a435cd120927a 514 SUPERFAMILY SSF46689 149 199 1.03E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_18670 6537ce51442ef663064a435cd120927a 514 SMART SM01009 218 334 3.2E-48 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AMS64_18080 303571c6711124491741f8204764d08a 146 Pfam PF00258 Flavodoxin 6 138 1.1E-25 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMS64_18080 303571c6711124491741f8204764d08a 146 SUPERFAMILY SSF52218 1 142 6.19E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_18080 303571c6711124491741f8204764d08a 146 Gene3D G3DSA:3.40.50.360 1 145 3.4E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_18080 303571c6711124491741f8204764d08a 146 PRINTS PR00369 Flavodoxin signature 106 125 1.3E-6 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMS64_18080 303571c6711124491741f8204764d08a 146 PRINTS PR00369 Flavodoxin signature 51 62 1.3E-6 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMS64_18080 303571c6711124491741f8204764d08a 146 PRINTS PR00369 Flavodoxin signature 82 92 1.3E-6 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 PRINTS PR00834 HtrA/DegQ protease family signature 93 105 9.8E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 PRINTS PR00834 HtrA/DegQ protease family signature 154 178 9.8E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 PRINTS PR00834 HtrA/DegQ protease family signature 194 211 9.8E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 9.8E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 PRINTS PR00834 HtrA/DegQ protease family signature 114 134 9.8E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 PRINTS PR00834 HtrA/DegQ protease family signature 304 316 9.8E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 Gene3D G3DSA:2.30.42.10 265 365 1.5E-23 T 11-10-2018 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 SUPERFAMILY SSF50494 24 273 1.35E-59 T 11-10-2018 IPR009003 Peptidase S1, PA clan AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 SMART SM00228 264 346 2.7E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 Pfam PF13365 Trypsin-like peptidase domain 84 223 5.0E-30 T 11-10-2018 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 Gene3D G3DSA:2.40.10.10 147 264 3.1E-36 T 11-10-2018 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 8 358 3.3E-144 T 11-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 Gene3D G3DSA:2.40.10.10 40 144 2.3E-30 T 11-10-2018 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 SUPERFAMILY SSF50156 247 354 1.71E-22 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMS64_02895 f8a1f121266bba73b8109a26d574c874 374 Pfam PF13180 PDZ domain 264 354 2.2E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMS64_16860 4cef60aac1140f29db8751f797f80a46 289 Hamap MF_01805 Segregation and condensation protein A [scpA]. 45 278 20.389 T 11-10-2018 IPR003768 Segregation and condensation protein A AMS64_16860 4cef60aac1140f29db8751f797f80a46 289 Pfam PF02616 Segregation and condensation protein ScpA 62 272 6.2E-26 T 11-10-2018 IPR003768 Segregation and condensation protein A AMS64_10350 02eeee4ec3160fea2004a3575511847a 536 PIRSF PIRSF002741 17 522 1.8E-66 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMS64_10350 02eeee4ec3160fea2004a3575511847a 536 Gene3D G3DSA:3.40.190.10 53 519 3.8E-166 T 11-10-2018 AMS64_10350 02eeee4ec3160fea2004a3575511847a 536 Gene3D G3DSA:3.10.105.10 261 507 3.8E-166 T 11-10-2018 AMS64_10350 02eeee4ec3160fea2004a3575511847a 536 SUPERFAMILY SSF53850 42 509 1.81E-88 T 11-10-2018 AMS64_10350 02eeee4ec3160fea2004a3575511847a 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 428 2.6E-72 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AMS64_02685 8454f64c9e42bfdd30e95bbc42d38e9e 244 SUPERFAMILY SSF69618 4 239 8.63E-57 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02685 8454f64c9e42bfdd30e95bbc42d38e9e 244 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 235 1.0E-40 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMS64_02685 8454f64c9e42bfdd30e95bbc42d38e9e 244 Gene3D G3DSA:3.40.50.10090 32 159 2.6E-72 T 11-10-2018 AMS64_02685 8454f64c9e42bfdd30e95bbc42d38e9e 244 Gene3D G3DSA:3.40.50.10090 4 238 2.6E-72 T 11-10-2018 AMS64_15870 51290877e52d5cee63aaea6912ee21ad 298 Pfam PF04055 Radical SAM superfamily 20 227 3.1E-24 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_15870 51290877e52d5cee63aaea6912ee21ad 298 SUPERFAMILY SSF102114 124 264 1.24E-13 T 11-10-2018 AMS64_15870 51290877e52d5cee63aaea6912ee21ad 298 SUPERFAMILY SSF54862 7 71 4.27E-5 T 11-10-2018 AMS64_15870 51290877e52d5cee63aaea6912ee21ad 298 Pfam PF13353 4Fe-4S single cluster domain 12 153 1.3E-11 T 11-10-2018 AMS64_15870 51290877e52d5cee63aaea6912ee21ad 298 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AMS64_15870 51290877e52d5cee63aaea6912ee21ad 298 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 288 3.7E-97 T 11-10-2018 AMS64_15870 51290877e52d5cee63aaea6912ee21ad 298 PIRSF PIRSF000371 1 298 3.5E-91 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AMS64_08175 96d69cc8aac37302d34a3564abce3359 578 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_08175 96d69cc8aac37302d34a3564abce3359 578 SUPERFAMILY SSF90123 6 317 2.75E-71 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_08175 96d69cc8aac37302d34a3564abce3359 578 SMART SM00382 360 544 5.8E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_08175 96d69cc8aac37302d34a3564abce3359 578 Pfam PF00664 ABC transporter transmembrane region 21 291 3.9E-37 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMS64_08175 96d69cc8aac37302d34a3564abce3359 578 Gene3D G3DSA:1.20.1560.10 4 318 4.4E-73 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_08175 96d69cc8aac37302d34a3564abce3359 578 Pfam PF00005 ABC transporter 351 499 3.8E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_08175 96d69cc8aac37302d34a3564abce3359 578 Gene3D G3DSA:3.40.50.300 331 577 1.3E-80 T 11-10-2018 AMS64_08175 96d69cc8aac37302d34a3564abce3359 578 SUPERFAMILY SSF52540 336 568 1.14E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_13280 dfd9f7afce77936ab5c635858453b98b 195 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 181 4.4E-35 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMS64_13280 dfd9f7afce77936ab5c635858453b98b 195 Gene3D G3DSA:3.40.50.1240 1 191 1.3E-40 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AMS64_13280 dfd9f7afce77936ab5c635858453b98b 195 SMART SM00855 4 160 3.9E-21 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMS64_13280 dfd9f7afce77936ab5c635858453b98b 195 PIRSF PIRSF000709 1 190 6.9E-8 T 11-10-2018 AMS64_13280 dfd9f7afce77936ab5c635858453b98b 195 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 AMS64_13280 dfd9f7afce77936ab5c635858453b98b 195 SUPERFAMILY SSF53254 2 186 1.44E-42 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AMS64_09305 e83b9f2980d7e55e90d5457eefe5e11a 195 Gene3D G3DSA:1.25.40.10 24 184 7.3E-38 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_09305 e83b9f2980d7e55e90d5457eefe5e11a 195 SUPERFAMILY SSF81901 33 173 3.92E-31 T 11-10-2018 AMS64_09305 e83b9f2980d7e55e90d5457eefe5e11a 195 Pfam PF08238 Sel1 repeat 95 129 3.9E-9 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_09305 e83b9f2980d7e55e90d5457eefe5e11a 195 Pfam PF08238 Sel1 repeat 131 165 0.0024 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_09305 e83b9f2980d7e55e90d5457eefe5e11a 195 Pfam PF08238 Sel1 repeat 58 93 4.8E-4 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_09305 e83b9f2980d7e55e90d5457eefe5e11a 195 SMART SM00671 94 129 1.7E-10 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_09305 e83b9f2980d7e55e90d5457eefe5e11a 195 SMART SM00671 130 165 0.0014 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_09305 e83b9f2980d7e55e90d5457eefe5e11a 195 SMART SM00671 58 93 3.4E-6 T 11-10-2018 IPR006597 Sel1-like repeat AMS64_17230 4881ea035e033c905ce709ba1d31d304 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 394 5.4E-26 T 11-10-2018 IPR018076 Type II secretion system F domain AMS64_17230 4881ea035e033c905ce709ba1d31d304 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 6.2E-32 T 11-10-2018 IPR018076 Type II secretion system F domain AMS64_17230 4881ea035e033c905ce709ba1d31d304 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.1E-41 T 11-10-2018 IPR003004 GspF/PilC family AMS64_17230 4881ea035e033c905ce709ba1d31d304 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 2.1E-41 T 11-10-2018 IPR003004 GspF/PilC family AMS64_17230 4881ea035e033c905ce709ba1d31d304 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 2.1E-41 T 11-10-2018 IPR003004 GspF/PilC family AMS64_17230 4881ea035e033c905ce709ba1d31d304 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.1E-41 T 11-10-2018 IPR003004 GspF/PilC family AMS64_17230 4881ea035e033c905ce709ba1d31d304 406 Gene3D G3DSA:1.20.81.30 56 173 5.5E-33 T 11-10-2018 AMS64_17230 4881ea035e033c905ce709ba1d31d304 406 Gene3D G3DSA:1.20.81.30 258 370 1.6E-25 T 11-10-2018 AMS64_17230 4881ea035e033c905ce709ba1d31d304 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 2.2E-164 T 11-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AMS64_17230 4881ea035e033c905ce709ba1d31d304 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 SUPERFAMILY SSF56634 4 477 2.22E-207 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 Pfam PF00199 Catalase 9 389 4.5E-192 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 Pfam PF06628 Catalase-related immune-responsive 417 477 1.4E-19 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 PRINTS PR00067 Catalase signature 83 101 5.5E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 PRINTS PR00067 Catalase signature 288 315 5.5E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 PRINTS PR00067 Catalase signature 20 43 5.5E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 PRINTS PR00067 Catalase signature 104 121 5.5E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 PRINTS PR00067 Catalase signature 123 141 5.5E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 PRINTS PR00067 Catalase signature 320 346 5.5E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 PIRSF PIRSF038928 1 482 4.4E-225 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 SMART SM01060 7 392 2.5E-283 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 Gene3D G3DSA:2.40.180.10 1 482 3.9E-222 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMS64_02315 96e1a72d6d4543dc17909037c7867cba 482 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMS64_12140 270779708098bdfba332821dded395bd 424 SUPERFAMILY SSF56672 4 238 1.87E-70 T 11-10-2018 AMS64_12140 270779708098bdfba332821dded395bd 424 Gene3D G3DSA:1.10.150.20 181 233 1.4E-9 T 11-10-2018 AMS64_12140 270779708098bdfba332821dded395bd 424 Pfam PF00817 impB/mucB/samB family 8 152 6.9E-34 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMS64_12140 270779708098bdfba332821dded395bd 424 SUPERFAMILY SSF100879 250 337 4.45E-7 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMS64_12140 270779708098bdfba332821dded395bd 424 Gene3D G3DSA:3.30.1490.100 246 357 1.2E-6 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMS64_12140 270779708098bdfba332821dded395bd 424 Gene3D G3DSA:3.30.70.270 5 156 4.9E-45 T 11-10-2018 AMS64_12140 270779708098bdfba332821dded395bd 424 Gene3D G3DSA:2.30.40.20 13 76 4.9E-45 T 11-10-2018 AMS64_12140 270779708098bdfba332821dded395bd 424 Pfam PF11799 impB/mucB/samB family C-terminal domain 245 356 6.9E-14 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMS64_12140 270779708098bdfba332821dded395bd 424 Pfam PF13438 Domain of unknown function (DUF4113) 373 422 8.3E-17 T 11-10-2018 IPR025188 Domain of unknown function DUF4113 AMS64_11535 03b40df97a0c86d63c91c05cd208fc75 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 334 38.228 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_11535 03b40df97a0c86d63c91c05cd208fc75 338 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_11535 03b40df97a0c86d63c91c05cd208fc75 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 335 7.3E-137 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMS64_11535 03b40df97a0c86d63c91c05cd208fc75 338 SUPERFAMILY SSF55347 131 321 4.17E-79 T 11-10-2018 AMS64_11535 03b40df97a0c86d63c91c05cd208fc75 338 SMART SM00859 6 121 4.2E-43 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMS64_11535 03b40df97a0c86d63c91c05cd208fc75 338 Gene3D G3DSA:3.40.50.720 7 332 2.9E-151 T 11-10-2018 AMS64_11535 03b40df97a0c86d63c91c05cd208fc75 338 Gene3D G3DSA:3.30.360.10 130 317 2.9E-151 T 11-10-2018 AMS64_11535 03b40df97a0c86d63c91c05cd208fc75 338 PIRSF PIRSF000148 4 338 4.8E-137 T 11-10-2018 AMS64_11535 03b40df97a0c86d63c91c05cd208fc75 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 1.8E-32 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMS64_11535 03b40df97a0c86d63c91c05cd208fc75 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 7.9E-64 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMS64_11535 03b40df97a0c86d63c91c05cd208fc75 338 SUPERFAMILY SSF51735 5 159 1.14E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_07955 6ab3f6f87712bc17cf25ce1c119e40b9 297 Gene3D G3DSA:1.10.3720.10 86 294 2.0E-19 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_07955 6ab3f6f87712bc17cf25ce1c119e40b9 297 SUPERFAMILY SSF161098 91 277 2.09E-23 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_07955 6ab3f6f87712bc17cf25ce1c119e40b9 297 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 15 67 1.2E-11 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMS64_07955 6ab3f6f87712bc17cf25ce1c119e40b9 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 292 5.6E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_01770 cfa646dbe3b281c139e0ca19eb9691f5 617 SUPERFAMILY SSF58104 308 617 3.01E-79 T 11-10-2018 AMS64_01770 cfa646dbe3b281c139e0ca19eb9691f5 617 SMART SM00304 287 340 8.4E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_01770 cfa646dbe3b281c139e0ca19eb9691f5 617 SMART SM00283 355 616 1.9E-81 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_01770 cfa646dbe3b281c139e0ca19eb9691f5 617 Gene3D G3DSA:1.10.287.950 287 617 4.0E-78 T 11-10-2018 AMS64_01770 cfa646dbe3b281c139e0ca19eb9691f5 617 SMART SM01358 26 261 1.1E-33 T 11-10-2018 IPR032255 Helical bimodular sensor domain AMS64_01770 cfa646dbe3b281c139e0ca19eb9691f5 617 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 400 583 1.2E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_14575 73e40ec1b867936eae97460f610b888b 638 Gene3D G3DSA:3.20.20.450 373 623 3.0E-76 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_14575 73e40ec1b867936eae97460f610b888b 638 SUPERFAMILY SSF55073 204 361 1.33E-30 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_14575 73e40ec1b867936eae97460f610b888b 638 SMART SM00052 369 617 1.1E-84 T 11-10-2018 IPR001633 EAL domain AMS64_14575 73e40ec1b867936eae97460f610b888b 638 Gene3D G3DSA:3.30.70.270 194 372 1.0E-35 T 11-10-2018 AMS64_14575 73e40ec1b867936eae97460f610b888b 638 SUPERFAMILY SSF141868 378 626 2.09E-72 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_14575 73e40ec1b867936eae97460f610b888b 638 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 358 2.6E-25 T 11-10-2018 IPR000160 GGDEF domain AMS64_14575 73e40ec1b867936eae97460f610b888b 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 354 9.7E-26 T 11-10-2018 IPR000160 GGDEF domain AMS64_14575 73e40ec1b867936eae97460f610b888b 638 SMART SM00267 188 359 1.2E-34 T 11-10-2018 IPR000160 GGDEF domain AMS64_14575 73e40ec1b867936eae97460f610b888b 638 Pfam PF00563 EAL domain 382 612 1.7E-64 T 11-10-2018 IPR001633 EAL domain AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 6.3E-240 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 SUPERFAMILY SSF55681 243 525 2.39E-99 T 11-10-2018 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 SUPERFAMILY SSF81271 3 61 5.89E-16 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 Gene3D G3DSA:3.10.20.30 3 62 1.1E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 Gene3D G3DSA:3.30.980.10 69 222 6.4E-63 T 11-10-2018 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 SUPERFAMILY SSF55186 63 241 1.18E-64 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 Pfam PF02824 TGS domain 4 61 7.3E-12 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 2.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 2.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 2.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 2.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 2.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 4.4E-49 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 1.3E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 Pfam PF03129 Anticodon binding domain 541 629 2.1E-21 T 11-10-2018 IPR004154 Anticodon-binding AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 SUPERFAMILY SSF52954 529 636 2.42E-32 T 11-10-2018 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 Gene3D G3DSA:3.30.930.10 223 531 2.2E-129 T 11-10-2018 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 Gene3D G3DSA:3.30.54.20 130 187 6.4E-63 T 11-10-2018 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 SMART SM00863 170 219 1.4E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 Gene3D G3DSA:3.40.50.800 532 642 2.9E-30 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AMS64_09310 979c5711205a85d942e44ca2eb4b3c58 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.053 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMS64_02320 611c5c91203b9c5a6549c260fe438489 165 Gene3D G3DSA:3.40.630.30 1 161 1.5E-44 T 11-10-2018 AMS64_02320 611c5c91203b9c5a6549c260fe438489 165 Pfam PF00583 Acetyltransferase (GNAT) family 46 134 1.5E-16 T 11-10-2018 IPR000182 GNAT domain AMS64_02320 611c5c91203b9c5a6549c260fe438489 165 SUPERFAMILY SSF55729 1 159 1.72E-38 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_16520 fc71051429442375e3ba4f26ca483bdc 296 SUPERFAMILY SSF64182 1 293 4.06E-56 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AMS64_16520 fc71051429442375e3ba4f26ca483bdc 296 SMART SM01131 177 293 1.4E-23 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMS64_16520 fc71051429442375e3ba4f26ca483bdc 296 Gene3D G3DSA:3.90.1640.10 1 185 1.5E-60 T 11-10-2018 AMS64_16520 fc71051429442375e3ba4f26ca483bdc 296 Pfam PF02833 DHHA2 domain 179 290 4.8E-14 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMS64_16520 fc71051429442375e3ba4f26ca483bdc 296 Gene3D G3DSA:3.10.310.20 186 295 3.3E-20 T 11-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMS64_16520 fc71051429442375e3ba4f26ca483bdc 296 Pfam PF01368 DHH family 2 142 5.2E-16 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMS64_01230 f31ab1c3cb4f1feeb1026bde23002d89 289 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 66 88 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site AMS64_01230 f31ab1c3cb4f1feeb1026bde23002d89 289 Gene3D G3DSA:1.20.120.1780 169 289 8.8E-17 T 11-10-2018 AMS64_01230 f31ab1c3cb4f1feeb1026bde23002d89 289 Gene3D G3DSA:1.10.357.140 22 168 2.1E-40 T 11-10-2018 AMS64_01230 f31ab1c3cb4f1feeb1026bde23002d89 289 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 4 287 30.311 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AMS64_01230 f31ab1c3cb4f1feeb1026bde23002d89 289 Pfam PF01040 UbiA prenyltransferase family 27 269 1.3E-63 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AMS64_01230 f31ab1c3cb4f1feeb1026bde23002d89 289 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 11 287 3.0E-106 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AMS64_02855 e3c8e3e1cea79b1820857e082002fdf4 246 SUPERFAMILY SSF51569 81 209 2.32E-5 T 11-10-2018 AMS64_02855 e3c8e3e1cea79b1820857e082002fdf4 246 Gene3D G3DSA:3.20.20.70 1 246 5.5E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_02855 e3c8e3e1cea79b1820857e082002fdf4 246 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 242 2.2E-119 T 11-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMS64_02855 e3c8e3e1cea79b1820857e082002fdf4 246 Pfam PF07071 KDGP aldolase 8 224 7.6E-109 T 11-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMS64_06725 a78ed47927b5c76dc797f40521ce12e4 610 Pfam PF02080 TrkA-C domain 326 393 8.7E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMS64_06725 a78ed47927b5c76dc797f40521ce12e4 610 Pfam PF02080 TrkA-C domain 231 297 5.2E-12 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMS64_06725 a78ed47927b5c76dc797f40521ce12e4 610 SUPERFAMILY SSF116726 321 393 3.14E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_06725 a78ed47927b5c76dc797f40521ce12e4 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 11-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AMS64_06725 a78ed47927b5c76dc797f40521ce12e4 610 SUPERFAMILY SSF116726 232 289 1.83E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_06725 a78ed47927b5c76dc797f40521ce12e4 610 Gene3D G3DSA:3.30.70.1450 219 298 1.4E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_06725 a78ed47927b5c76dc797f40521ce12e4 610 Gene3D G3DSA:3.30.70.1450 323 398 5.0E-15 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_06725 a78ed47927b5c76dc797f40521ce12e4 610 Pfam PF03600 Citrate transporter 17 555 4.1E-58 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AMS64_05900 d37eac01504dfeb72639b225900c5d7c 69 Gene3D G3DSA:1.10.260.40 3 68 3.5E-11 T 11-10-2018 AMS64_05900 d37eac01504dfeb72639b225900c5d7c 69 SUPERFAMILY SSF47413 1 67 9.85E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_05900 d37eac01504dfeb72639b225900c5d7c 69 SMART SM00530 6 62 8.9E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_05900 d37eac01504dfeb72639b225900c5d7c 69 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 4.9E-22 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_04245 85d7f2138fdf83fbf58fbb2356e29a97 93 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 3 67 3.7E-20 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family AMS64_06335 54b78551501f4a64d4b4a46de34a7872 312 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 145 309 7.9E-47 T 11-10-2018 IPR000160 GGDEF domain AMS64_06335 54b78551501f4a64d4b4a46de34a7872 312 Gene3D G3DSA:3.30.450.20 5 138 3.9E-7 T 11-10-2018 AMS64_06335 54b78551501f4a64d4b4a46de34a7872 312 SUPERFAMILY SSF55073 152 309 4.87E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_06335 54b78551501f4a64d4b4a46de34a7872 312 Gene3D G3DSA:3.30.70.270 139 310 4.2E-54 T 11-10-2018 AMS64_06335 54b78551501f4a64d4b4a46de34a7872 312 SUPERFAMILY SSF55785 7 134 1.35E-6 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_06335 54b78551501f4a64d4b4a46de34a7872 312 SMART SM00267 136 310 3.2E-56 T 11-10-2018 IPR000160 GGDEF domain AMS64_06335 54b78551501f4a64d4b4a46de34a7872 312 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 306 3.0E-45 T 11-10-2018 IPR000160 GGDEF domain AMS64_17495 3a5f230c8e5652ac1b4964680760d68d 104 Pfam PF11006 Protein of unknown function (DUF2845) 23 100 1.2E-21 T 11-10-2018 IPR021268 Protein of unknown function DUF2845 AMS64_16895 1ed868686479072d6b2f41299156da87 397 PIRSF PIRSF001413 2 395 2.5E-166 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMS64_16895 1ed868686479072d6b2f41299156da87 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 1.5E-190 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMS64_16895 1ed868686479072d6b2f41299156da87 397 Gene3D G3DSA:3.40.50.1100 53 383 5.2E-183 T 11-10-2018 AMS64_16895 1ed868686479072d6b2f41299156da87 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMS64_16895 1ed868686479072d6b2f41299156da87 397 Gene3D G3DSA:3.40.50.1100 9 204 5.2E-183 T 11-10-2018 AMS64_16895 1ed868686479072d6b2f41299156da87 397 SUPERFAMILY SSF53686 5 389 1.44E-143 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMS64_16895 1ed868686479072d6b2f41299156da87 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 1.7E-50 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMS64_16895 1ed868686479072d6b2f41299156da87 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.851 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMS64_21055 34b1a2a73ed90329d6a24244a66f0e2c 221 SUPERFAMILY SSF48008 78 212 1.36E-19 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMS64_21055 34b1a2a73ed90329d6a24244a66f0e2c 221 SMART SM00345 12 70 3.3E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_21055 34b1a2a73ed90329d6a24244a66f0e2c 221 Gene3D G3DSA:1.10.10.10 1 71 9.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_21055 34b1a2a73ed90329d6a24244a66f0e2c 221 SMART SM00895 80 206 1.5E-12 T 11-10-2018 IPR011711 GntR, C-terminal AMS64_21055 34b1a2a73ed90329d6a24244a66f0e2c 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 5.4E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_21055 34b1a2a73ed90329d6a24244a66f0e2c 221 Gene3D G3DSA:1.20.120.530 76 219 3.3E-23 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMS64_21055 34b1a2a73ed90329d6a24244a66f0e2c 221 Pfam PF07729 FCD domain 80 206 2.6E-19 T 11-10-2018 IPR011711 GntR, C-terminal AMS64_21055 34b1a2a73ed90329d6a24244a66f0e2c 221 SUPERFAMILY SSF46785 6 84 2.31E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_16865 f02bc831c62fe7e2e8fe12a0ca097159 206 Pfam PF01300 Telomere recombination 22 198 7.2E-44 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AMS64_16865 f02bc831c62fe7e2e8fe12a0ca097159 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.1E-68 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AMS64_16865 f02bc831c62fe7e2e8fe12a0ca097159 206 SUPERFAMILY SSF55821 1 203 2.75E-63 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMS64_16865 f02bc831c62fe7e2e8fe12a0ca097159 206 Gene3D G3DSA:3.90.870.10 1 205 3.3E-66 T 11-10-2018 AMS64_04225 c7751d06c2ba42890971fcc2c2d096ab 345 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 28 39 - T 11-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AMS64_04225 c7751d06c2ba42890971fcc2c2d096ab 345 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 28 330 1.5E-18 T 11-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 AMS64_04225 c7751d06c2ba42890971fcc2c2d096ab 345 Gene3D G3DSA:3.40.50.1110 15 279 6.4E-39 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AMS64_04225 c7751d06c2ba42890971fcc2c2d096ab 345 SUPERFAMILY SSF52266 27 339 3.54E-20 T 11-10-2018 AMS64_01845 984f4d4872bd5867367b9ed468f609a8 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 444 8.8E-148 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AMS64_01845 984f4d4872bd5867367b9ed468f609a8 446 Pfam PF02447 GntP family permease 5 442 3.6E-149 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AMS64_01845 984f4d4872bd5867367b9ed468f609a8 446 PIRSF PIRSF002746 1 446 8.4E-153 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 Pfam PF00318 Ribosomal protein S2 9 224 3.8E-98 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 Gene3D G3DSA:3.40.50.10490 8 218 1.0E-96 T 11-10-2018 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 42.653 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 SUPERFAMILY SSF52313 6 229 1.07E-99 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 Gene3D G3DSA:1.10.287.610 103 150 1.0E-96 T 11-10-2018 AMS64_18040 7bd1ba5c1c11132565ae173642c48917 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.0E-111 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_16255 9a3f55007deb7ef7cb3b7fdd9c125620 362 Gene3D G3DSA:3.20.20.70 12 323 1.6E-134 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_16255 9a3f55007deb7ef7cb3b7fdd9c125620 362 TIGRFAM TIGR00433 bioB: biotin synthase 23 318 1.3E-126 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMS64_16255 9a3f55007deb7ef7cb3b7fdd9c125620 362 SUPERFAMILY SSF102114 13 323 7.46E-95 T 11-10-2018 AMS64_16255 9a3f55007deb7ef7cb3b7fdd9c125620 362 SMART SM00876 228 320 2.2E-49 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMS64_16255 9a3f55007deb7ef7cb3b7fdd9c125620 362 PIRSF PIRSF001619 2 326 5.9E-137 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMS64_16255 9a3f55007deb7ef7cb3b7fdd9c125620 362 Hamap MF_01694 Biotin synthase [bioB]. 13 321 42.157 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMS64_16255 9a3f55007deb7ef7cb3b7fdd9c125620 362 SMART SM00729 51 263 7.6E-40 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMS64_16255 9a3f55007deb7ef7cb3b7fdd9c125620 362 Pfam PF04055 Radical SAM superfamily 58 206 3.2E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_16255 9a3f55007deb7ef7cb3b7fdd9c125620 362 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 228 318 2.0E-20 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMS64_02800 730a79a1d3ffe97ef036e7b12136099d 331 Pfam PF00571 CBS domain 208 264 2.5E-4 T 11-10-2018 IPR000644 CBS domain AMS64_02800 730a79a1d3ffe97ef036e7b12136099d 331 Pfam PF00571 CBS domain 276 328 1.8E-9 T 11-10-2018 IPR000644 CBS domain AMS64_02800 730a79a1d3ffe97ef036e7b12136099d 331 Gene3D G3DSA:3.40.50.10490 13 202 4.7E-68 T 11-10-2018 AMS64_02800 730a79a1d3ffe97ef036e7b12136099d 331 SMART SM00116 217 265 15.0 T 11-10-2018 IPR000644 CBS domain AMS64_02800 730a79a1d3ffe97ef036e7b12136099d 331 SMART SM00116 282 330 0.034 T 11-10-2018 IPR000644 CBS domain AMS64_02800 730a79a1d3ffe97ef036e7b12136099d 331 Pfam PF01380 SIS domain 48 179 2.4E-33 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMS64_02800 730a79a1d3ffe97ef036e7b12136099d 331 Gene3D G3DSA:3.10.580.10 203 328 4.6E-43 T 11-10-2018 AMS64_02800 730a79a1d3ffe97ef036e7b12136099d 331 SUPERFAMILY SSF53697 17 326 5.34E-70 T 11-10-2018 AMS64_02800 730a79a1d3ffe97ef036e7b12136099d 331 PIRSF PIRSF004692 2 331 2.1E-132 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AMS64_02800 730a79a1d3ffe97ef036e7b12136099d 331 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 52 320 4.6E-111 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AMS64_00530 de6bf4743b9fca8ccf8e49607658d07c 80 PRINTS PR00124 ATP synthase C subunit signature 33 48 2.3E-8 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00530 de6bf4743b9fca8ccf8e49607658d07c 80 PRINTS PR00124 ATP synthase C subunit signature 12 31 2.3E-8 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00530 de6bf4743b9fca8ccf8e49607658d07c 80 PRINTS PR00124 ATP synthase C subunit signature 50 75 2.3E-8 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00530 de6bf4743b9fca8ccf8e49607658d07c 80 SUPERFAMILY SSF81333 3 77 6.54E-18 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily AMS64_00530 de6bf4743b9fca8ccf8e49607658d07c 80 Gene3D G3DSA:1.20.20.10 1 79 2.4E-33 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00530 de6bf4743b9fca8ccf8e49607658d07c 80 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00530 de6bf4743b9fca8ccf8e49607658d07c 80 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 13.887 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00530 de6bf4743b9fca8ccf8e49607658d07c 80 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 8.8E-31 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMS64_00530 de6bf4743b9fca8ccf8e49607658d07c 80 Pfam PF00137 ATP synthase subunit C 11 69 1.4E-9 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMS64_00080 e2a81c8b4ddd383df653666a9d55c84c 151 Gene3D G3DSA:2.60.120.370 1 144 4.3E-14 T 11-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily AMS64_00080 e2a81c8b4ddd383df653666a9d55c84c 151 Pfam PF04074 Domain of unknown function (DUF386) 4 141 1.9E-23 T 11-10-2018 IPR004375 YhcH/YjgK/YiaL family AMS64_00080 e2a81c8b4ddd383df653666a9d55c84c 151 SUPERFAMILY SSF51197 1 144 1.59E-23 T 11-10-2018 AMS64_12970 c6b96923ee971ca2e48e5d26db7e1a6e 397 Gene3D G3DSA:3.40.190.10 134 368 2.9E-59 T 11-10-2018 AMS64_12970 c6b96923ee971ca2e48e5d26db7e1a6e 397 SUPERFAMILY SSF53850 28 387 2.23E-58 T 11-10-2018 AMS64_12970 c6b96923ee971ca2e48e5d26db7e1a6e 397 Gene3D G3DSA:3.40.190.10 44 351 2.9E-59 T 11-10-2018 AMS64_12970 c6b96923ee971ca2e48e5d26db7e1a6e 397 Pfam PF13416 Bacterial extracellular solute-binding protein 44 325 8.0E-26 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMS64_21745 005ec1247a74addaed94e03086af8820 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 2.6E-47 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_21745 005ec1247a74addaed94e03086af8820 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 1.0E-18 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_21745 005ec1247a74addaed94e03086af8820 121 Gene3D G3DSA:1.20.5.710 2 50 4.3E-24 T 11-10-2018 AMS64_21745 005ec1247a74addaed94e03086af8820 121 SUPERFAMILY SSF54736 50 121 5.76E-25 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMS64_21745 005ec1247a74addaed94e03086af8820 121 Gene3D G3DSA:3.30.1390.10 51 121 5.0E-32 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMS64_21745 005ec1247a74addaed94e03086af8820 121 SUPERFAMILY SSF48300 3 57 1.02E-16 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_21745 005ec1247a74addaed94e03086af8820 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 6.6E-31 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_21745 005ec1247a74addaed94e03086af8820 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.822 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_21745 005ec1247a74addaed94e03086af8820 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 2.6E-15 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_18320 0c0fd2a81c9244209ec4e25b5b7c3c04 142 SUPERFAMILY SSF54427 1 134 2.25E-24 T 11-10-2018 IPR032710 NTF2-like domain superfamily AMS64_18320 0c0fd2a81c9244209ec4e25b5b7c3c04 142 Pfam PF12680 SnoaL-like domain 11 112 8.8E-14 T 11-10-2018 IPR037401 SnoaL-like domain AMS64_18320 0c0fd2a81c9244209ec4e25b5b7c3c04 142 Gene3D G3DSA:3.10.450.50 6 124 2.5E-21 T 11-10-2018 AMS64_01225 02da414a83d4c2a7bb2d43ce413e169b 178 Pfam PF04345 Chorismate lyase 15 175 3.4E-30 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AMS64_01225 02da414a83d4c2a7bb2d43ce413e169b 178 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 13 174 22.53 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AMS64_01225 02da414a83d4c2a7bb2d43ce413e169b 178 Gene3D G3DSA:3.40.1410.10 10 173 6.5E-37 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMS64_01225 02da414a83d4c2a7bb2d43ce413e169b 178 SUPERFAMILY SSF64288 13 171 1.57E-33 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMS64_10915 d587ee1b6c21b3de6a7340a21b33bb64 155 SUPERFAMILY SSF53254 1 147 1.96E-22 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AMS64_10915 d587ee1b6c21b3de6a7340a21b33bb64 155 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 70 1.2E-10 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMS64_10915 d587ee1b6c21b3de6a7340a21b33bb64 155 SMART SM00855 2 115 6.1E-6 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMS64_10915 d587ee1b6c21b3de6a7340a21b33bb64 155 Gene3D G3DSA:3.40.50.1240 1 155 8.4E-39 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AMS64_10915 d587ee1b6c21b3de6a7340a21b33bb64 155 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 151 9.8E-38 T 11-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 AMS64_14310 eafa771c5d57a6fd5c45bf304814a94b 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_14310 eafa771c5d57a6fd5c45bf304814a94b 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_14310 eafa771c5d57a6fd5c45bf304814a94b 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_14310 eafa771c5d57a6fd5c45bf304814a94b 318 Gene3D G3DSA:3.40.190.10 92 296 3.4E-59 T 11-10-2018 AMS64_14310 eafa771c5d57a6fd5c45bf304814a94b 318 Pfam PF03466 LysR substrate binding domain 91 270 8.7E-31 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_14310 eafa771c5d57a6fd5c45bf304814a94b 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 9.6E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_14310 eafa771c5d57a6fd5c45bf304814a94b 318 SUPERFAMILY SSF46785 1 113 4.45E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_14310 eafa771c5d57a6fd5c45bf304814a94b 318 Gene3D G3DSA:3.40.190.10 166 261 3.4E-59 T 11-10-2018 AMS64_14310 eafa771c5d57a6fd5c45bf304814a94b 318 SUPERFAMILY SSF53850 91 296 1.96E-30 T 11-10-2018 AMS64_14310 eafa771c5d57a6fd5c45bf304814a94b 318 Gene3D G3DSA:1.10.10.10 1 87 9.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PIRSF PIRSF000350 1 445 2.8E-84 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 Gene3D G3DSA:3.30.390.30 337 449 1.2E-46 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 SUPERFAMILY SSF51905 1 358 7.77E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 Gene3D G3DSA:3.50.50.60 143 260 3.2E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 Gene3D G3DSA:3.50.50.60 5 317 3.2E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 SUPERFAMILY SSF55424 335 449 1.89E-33 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 449 1.7E-215 T 11-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 9.2E-28 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 9.2E-28 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 9.2E-28 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.2E-28 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 9.2E-28 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 5.7E-66 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 5.7E-66 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 5.7E-66 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.7E-66 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 5.7E-66 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 5.7E-66 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.7E-66 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 5.7E-66 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 5.7E-66 T 11-10-2018 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 448 6.8E-33 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMS64_00335 02cc60de94424be20f65f65bb57dc6ef 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 317 1.5E-67 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_04400 1338d7babaeb3d8f7d27b8fba5eae42e 423 Pfam PF04403 Paraquat-inducible protein A 57 208 3.3E-40 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AMS64_04400 1338d7babaeb3d8f7d27b8fba5eae42e 423 Pfam PF04403 Paraquat-inducible protein A 260 415 6.5E-56 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AMS64_04400 1338d7babaeb3d8f7d27b8fba5eae42e 423 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 12 414 1.2E-103 T 11-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type AMS64_07275 8ac910d3c0a4ecf8a3db2c7b6577cd6b 583 SUPERFAMILY SSF51556 83 540 8.01E-32 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_07275 8ac910d3c0a4ecf8a3db2c7b6577cd6b 583 Gene3D G3DSA:2.30.40.10 31 555 6.6E-104 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_07275 8ac910d3c0a4ecf8a3db2c7b6577cd6b 583 SUPERFAMILY SSF51338 19 582 2.38E-21 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_07275 8ac910d3c0a4ecf8a3db2c7b6577cd6b 583 Gene3D G3DSA:3.10.310.70 102 226 6.6E-104 T 11-10-2018 AMS64_07275 8ac910d3c0a4ecf8a3db2c7b6577cd6b 583 Pfam PF07969 Amidohydrolase family 74 580 1.8E-65 T 11-10-2018 IPR013108 Amidohydrolase 3 AMS64_07275 8ac910d3c0a4ecf8a3db2c7b6577cd6b 583 Gene3D G3DSA:3.20.20.140 84 539 6.6E-104 T 11-10-2018 AMS64_03210 c0ed076143a6ee00769103b10eae5d9e 312 SUPERFAMILY SSF53335 7 310 1.7E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_03210 c0ed076143a6ee00769103b10eae5d9e 312 Gene3D G3DSA:1.10.150.170 112 214 8.1E-106 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AMS64_03210 c0ed076143a6ee00769103b10eae5d9e 312 Gene3D G3DSA:3.40.50.150 10 309 8.1E-106 T 11-10-2018 AMS64_03210 c0ed076143a6ee00769103b10eae5d9e 312 PIRSF PIRSF004486 1 311 1.3E-100 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMS64_03210 c0ed076143a6ee00769103b10eae5d9e 312 SUPERFAMILY SSF81799 114 213 6.8E-34 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AMS64_03210 c0ed076143a6ee00769103b10eae5d9e 312 Pfam PF01795 MraW methylase family 5 309 6.2E-114 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMS64_03210 c0ed076143a6ee00769103b10eae5d9e 312 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 309 3.0E-120 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMS64_03210 c0ed076143a6ee00769103b10eae5d9e 312 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 310 38.032 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMS64_08365 7adeeaf2c08d1561d4d674af1b5cc35a 480 Pfam PF02335 Cytochrome c552 45 474 3.3E-179 T 11-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AMS64_08365 7adeeaf2c08d1561d4d674af1b5cc35a 480 PIRSF PIRSF000243 24 480 3.0E-124 T 11-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AMS64_08365 7adeeaf2c08d1561d4d674af1b5cc35a 480 Gene3D G3DSA:1.20.140.10 313 455 1.7E-188 T 11-10-2018 AMS64_08365 7adeeaf2c08d1561d4d674af1b5cc35a 480 SUPERFAMILY SSF48695 39 474 1.48E-163 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AMS64_08365 7adeeaf2c08d1561d4d674af1b5cc35a 480 Hamap MF_01182 Cytochrome c-552 [nrfA]. 5 479 57.585 T 11-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AMS64_08365 7adeeaf2c08d1561d4d674af1b5cc35a 480 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 40 476 6.7E-245 T 11-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AMS64_08365 7adeeaf2c08d1561d4d674af1b5cc35a 480 Gene3D G3DSA:1.10.1130.10 45 473 1.7E-188 T 11-10-2018 AMS64_21975 45c8771d5d9c9d1f8b2524afc4d72f6c 466 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 4.2E-19 T 11-10-2018 AMS64_21975 45c8771d5d9c9d1f8b2524afc4d72f6c 466 PRINTS PR00173 Glutamate-aspartate symporter signature 232 251 4.2E-19 T 11-10-2018 AMS64_21975 45c8771d5d9c9d1f8b2524afc4d72f6c 466 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 4.2E-19 T 11-10-2018 AMS64_21975 45c8771d5d9c9d1f8b2524afc4d72f6c 466 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 4.2E-19 T 11-10-2018 AMS64_21975 45c8771d5d9c9d1f8b2524afc4d72f6c 466 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 4.2E-19 T 11-10-2018 AMS64_21975 45c8771d5d9c9d1f8b2524afc4d72f6c 466 Gene3D G3DSA:1.10.3860.10 20 459 5.7E-95 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_21975 45c8771d5d9c9d1f8b2524afc4d72f6c 466 Pfam PF00375 Sodium:dicarboxylate symporter family 30 441 7.3E-94 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMS64_21975 45c8771d5d9c9d1f8b2524afc4d72f6c 466 SUPERFAMILY SSF118215 29 441 5.36E-86 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 Gene3D G3DSA:1.10.460.10 160 600 8.1E-166 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 635 2.8E-242 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 647 59.225 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 330 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 6.8E-24 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 6.8E-24 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 6.8E-24 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 6.8E-24 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 6.8E-24 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 Pfam PF01131 DNA topoisomerase 155 592 2.1E-115 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 Gene3D G3DSA:3.40.50.140 1 154 1.6E-59 T 11-10-2018 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 SMART SM00493 1 124 1.6E-21 T 11-10-2018 IPR006171 TOPRIM domain AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 Gene3D G3DSA:1.10.290.10 287 416 8.1E-166 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 SUPERFAMILY SSF56712 1 606 6.02E-187 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 Pfam PF01751 Toprim domain 3 133 4.7E-14 T 11-10-2018 IPR006171 TOPRIM domain AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 Gene3D G3DSA:2.70.20.10 215 488 8.1E-166 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 SMART SM00437 278 558 2.0E-89 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AMS64_21835 80fe1f01144959f96b06aa960f932fd7 657 SMART SM00436 126 221 1.6E-36 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AMS64_18255 c8dfd4d220c7252e8ffe38ed042bb7e6 210 PIRSF PIRSF006102 3 210 1.5E-65 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMS64_18255 c8dfd4d220c7252e8ffe38ed042bb7e6 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 5.5E-102 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AMS64_18255 c8dfd4d220c7252e8ffe38ed042bb7e6 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 195 2.3E-61 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMS64_18255 c8dfd4d220c7252e8ffe38ed042bb7e6 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.077 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AMS64_17350 66df88106cae3488594c739cec11b530 349 Gene3D G3DSA:2.40.50.100 62 190 9.8E-69 T 11-10-2018 AMS64_17350 66df88106cae3488594c739cec11b530 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 262 1.8E-30 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMS64_17350 66df88106cae3488594c739cec11b530 349 SUPERFAMILY SSF111369 51 268 4.71E-39 T 11-10-2018 AMS64_17350 66df88106cae3488594c739cec11b530 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 342 1.7E-74 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_17350 66df88106cae3488594c739cec11b530 349 Gene3D G3DSA:2.40.420.20 273 341 9.8E-69 T 11-10-2018 AMS64_17350 66df88106cae3488594c739cec11b530 349 Gene3D G3DSA:1.10.287.470 97 156 9.8E-69 T 11-10-2018 AMS64_17350 66df88106cae3488594c739cec11b530 349 Gene3D G3DSA:2.40.30.170 51 272 9.8E-69 T 11-10-2018 AMS64_10265 a035b52480f070df2285b8e06b9dfd87 185 Pfam PF12838 4Fe-4S dicluster domain 39 89 3.6E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_10265 a035b52480f070df2285b8e06b9dfd87 185 SUPERFAMILY SSF54862 18 118 1.19E-21 T 11-10-2018 AMS64_10265 a035b52480f070df2285b8e06b9dfd87 185 Gene3D G3DSA:3.30.70.3270 18 119 3.9E-25 T 11-10-2018 AMS64_10265 a035b52480f070df2285b8e06b9dfd87 185 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_06990 9a88bd0e1420208f2d52712ff02fb006 517 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 301 483 1.4E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_06990 9a88bd0e1420208f2d52712ff02fb006 517 Pfam PF08447 PAS fold 32 114 5.7E-17 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AMS64_06990 9a88bd0e1420208f2d52712ff02fb006 517 SUPERFAMILY SSF58104 235 516 4.32E-67 T 11-10-2018 AMS64_06990 9a88bd0e1420208f2d52712ff02fb006 517 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 110 5.3E-16 T 11-10-2018 IPR000014 PAS domain AMS64_06990 9a88bd0e1420208f2d52712ff02fb006 517 SMART SM00283 256 517 7.3E-52 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_06990 9a88bd0e1420208f2d52712ff02fb006 517 Gene3D G3DSA:1.10.287.950 201 517 1.8E-61 T 11-10-2018 AMS64_06990 9a88bd0e1420208f2d52712ff02fb006 517 SUPERFAMILY SSF55785 22 115 2.44E-28 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_06990 9a88bd0e1420208f2d52712ff02fb006 517 Gene3D G3DSA:3.30.450.20 19 145 1.3E-27 T 11-10-2018 AMS64_15410 90a8ffcaaf0d86e09830f3b36fa0f561 272 SMART SM00382 50 259 9.2E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_15410 90a8ffcaaf0d86e09830f3b36fa0f561 272 SUPERFAMILY SSF52540 23 258 5.09E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_15410 90a8ffcaaf0d86e09830f3b36fa0f561 272 Pfam PF00005 ABC transporter 42 197 4.3E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_15410 90a8ffcaaf0d86e09830f3b36fa0f561 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 6.6E-128 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AMS64_15410 90a8ffcaaf0d86e09830f3b36fa0f561 272 Gene3D G3DSA:3.40.50.300 21 269 6.6E-67 T 11-10-2018 AMS64_15410 90a8ffcaaf0d86e09830f3b36fa0f561 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_11870 6910cd58729a42f5a1a2a21795056643 248 Gene3D G3DSA:3.40.190.10 32 244 3.0E-26 T 11-10-2018 AMS64_11870 6910cd58729a42f5a1a2a21795056643 248 Gene3D G3DSA:3.40.190.10 109 205 3.0E-26 T 11-10-2018 AMS64_11870 6910cd58729a42f5a1a2a21795056643 248 SMART SM00062 24 248 0.0068 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_11870 6910cd58729a42f5a1a2a21795056643 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 245 2.9E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_11870 6910cd58729a42f5a1a2a21795056643 248 SUPERFAMILY SSF53850 32 246 1.38E-33 T 11-10-2018 AMS64_03740 55b6125c20f13276a9f40b941f2c30a4 172 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 113 123 - T 11-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 AMS64_03740 55b6125c20f13276a9f40b941f2c30a4 172 Gene3D G3DSA:3.90.190.10 7 171 9.1E-29 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMS64_03740 55b6125c20f13276a9f40b941f2c30a4 172 SUPERFAMILY SSF52799 11 168 5.52E-31 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMS64_03740 55b6125c20f13276a9f40b941f2c30a4 172 Pfam PF00782 Dual specificity phosphatase, catalytic domain 69 160 1.0E-7 T 11-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 AMS64_02180 f7a69f6d69b751d760305ae4802d3c3e 159 Pfam PF00583 Acetyltransferase (GNAT) family 43 138 3.1E-9 T 11-10-2018 IPR000182 GNAT domain AMS64_02180 f7a69f6d69b751d760305ae4802d3c3e 159 SUPERFAMILY SSF55729 12 148 1.01E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_02180 f7a69f6d69b751d760305ae4802d3c3e 159 Gene3D G3DSA:3.40.630.30 4 155 8.4E-20 T 11-10-2018 AMS64_18275 8b6370bbb43c20d5293f74807131e7b3 74 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 2.3E-23 T 11-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM AMS64_17420 c3c57d0de9fd7d156184addbb30a7f36 334 SUPERFAMILY SSF56925 22 164 3.4E-24 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMS64_17420 c3c57d0de9fd7d156184addbb30a7f36 334 Pfam PF00691 OmpA family 214 307 1.7E-18 T 11-10-2018 IPR006665 OmpA-like domain AMS64_17420 c3c57d0de9fd7d156184addbb30a7f36 334 PRINTS PR01021 OMPA domain signature 247 262 3.1E-20 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_17420 c3c57d0de9fd7d156184addbb30a7f36 334 PRINTS PR01021 OMPA domain signature 262 278 3.1E-20 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_17420 c3c57d0de9fd7d156184addbb30a7f36 334 PRINTS PR01021 OMPA domain signature 215 237 3.1E-20 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMS64_17420 c3c57d0de9fd7d156184addbb30a7f36 334 ProSitePatterns PS01068 OmpA-like domain. 249 293 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMS64_17420 c3c57d0de9fd7d156184addbb30a7f36 334 Pfam PF01389 OmpA-like transmembrane domain 23 182 6.1E-46 T 11-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AMS64_17420 c3c57d0de9fd7d156184addbb30a7f36 334 Gene3D G3DSA:2.40.160.20 10 200 1.0E-36 T 11-10-2018 AMS64_17420 c3c57d0de9fd7d156184addbb30a7f36 334 Gene3D G3DSA:3.30.1330.60 201 330 8.4E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_17420 c3c57d0de9fd7d156184addbb30a7f36 334 SUPERFAMILY SSF103088 204 326 1.7E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_06140 09718161d0fd19a623168a344def84d1 626 Pfam PF09299 Mu transposase, C-terminal 446 510 2.1E-10 T 11-10-2018 IPR015378 Transposase-like, Mu, C-terminal AMS64_06140 09718161d0fd19a623168a344def84d1 626 Gene3D G3DSA:3.30.420.10 222 430 1.6E-33 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_06140 09718161d0fd19a623168a344def84d1 626 Pfam PF00665 Integrase core domain 225 361 8.0E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_06140 09718161d0fd19a623168a344def84d1 626 SUPERFAMILY SSF53098 220 418 1.77E-21 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_04390 235edad9300c45611705675533a9033e 189 Gene3D G3DSA:3.40.50.10610 16 188 1.2E-11 T 11-10-2018 AMS64_04390 235edad9300c45611705675533a9033e 189 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 181 7.3E-39 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AMS64_04390 235edad9300c45611705675533a9033e 189 SUPERFAMILY SSF159594 24 186 9.94E-28 T 11-10-2018 AMS64_08745 325d9002702f73603623b48c95636576 300 Pfam PF00892 EamA-like transporter family 156 281 7.7E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_08745 325d9002702f73603623b48c95636576 300 SUPERFAMILY SSF103481 44 144 9.94E-10 T 11-10-2018 AMS64_08745 325d9002702f73603623b48c95636576 300 SUPERFAMILY SSF103481 188 287 1.11E-15 T 11-10-2018 AMS64_16135 6c6b4d83f3081cf7cd7779c3c19d4e14 538 Gene3D G3DSA:3.40.720.10 215 538 4.5E-80 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMS64_16135 6c6b4d83f3081cf7cd7779c3c19d4e14 538 SUPERFAMILY SSF53649 274 522 3.71E-18 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMS64_16135 6c6b4d83f3081cf7cd7779c3c19d4e14 538 Pfam PF08019 Domain of unknown function (DUF1705) 52 201 1.0E-47 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AMS64_16135 6c6b4d83f3081cf7cd7779c3c19d4e14 538 Pfam PF00884 Sulfatase 231 520 1.1E-44 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AMS64_08490 f58c286aa0b740a878e04697f65e718a 125 Pfam PF04304 Protein of unknown function (DUF454) 3 116 3.9E-39 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AMS64_08490 f58c286aa0b740a878e04697f65e718a 125 PIRSF PIRSF016789 2 122 4.9E-42 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AMS64_00450 8c1b8492663ce9598b0fca9369ccd48a 44 Pfam PF00468 Ribosomal protein L34 1 44 2.3E-25 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_00450 8c1b8492663ce9598b0fca9369ccd48a 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 2 26 1.0E-6 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_00450 8c1b8492663ce9598b0fca9369ccd48a 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_00450 8c1b8492663ce9598b0fca9369ccd48a 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.7E-27 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_00450 8c1b8492663ce9598b0fca9369ccd48a 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.669 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_00820 b65167e8d4ab61bdbb178a15be1c89f5 233 Pfam PF00005 ABC transporter 17 161 3.4E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_00820 b65167e8d4ab61bdbb178a15be1c89f5 233 Gene3D G3DSA:3.40.50.300 1 233 2.7E-67 T 11-10-2018 AMS64_00820 b65167e8d4ab61bdbb178a15be1c89f5 233 SMART SM00382 26 212 5.6E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_00820 b65167e8d4ab61bdbb178a15be1c89f5 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_00820 b65167e8d4ab61bdbb178a15be1c89f5 233 SUPERFAMILY SSF52540 1 231 7.1E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00820 b65167e8d4ab61bdbb178a15be1c89f5 233 PIRSF PIRSF039137 1 233 1.6E-103 T 11-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Gene3D G3DSA:3.30.450.20 82 190 1.5E-23 T 11-10-2018 AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 SMART SM00091 80 146 8.9E-6 T 11-10-2018 IPR000014 PAS domain AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 SUPERFAMILY SSF52540 210 447 6.52E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 467 514 3.1E-28 T 11-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 SUPERFAMILY SSF46689 456 513 2.45E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Pfam PF00989 PAS fold 81 122 2.5E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 419 428 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Gene3D G3DSA:3.40.50.300 196 376 3.2E-62 T 11-10-2018 AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Gene3D G3DSA:1.10.10.60 456 514 4.7E-27 T 11-10-2018 AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 SUPERFAMILY SSF55785 81 159 3.14E-8 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 SUPERFAMILY SSF55021 2 69 3.4E-7 T 11-10-2018 AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Gene3D G3DSA:1.10.8.60 377 444 3.4E-21 T 11-10-2018 AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Pfam PF00158 Sigma-54 interaction domain 208 372 2.4E-61 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 SMART SM00382 226 370 1.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_08010 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Gene3D G3DSA:3.30.70.260 1 80 7.2E-29 T 11-10-2018 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 SMART SM00260 592 732 1.7E-35 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 Gene3D G3DSA:1.10.287.560 352 412 7.1E-19 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 Gene3D G3DSA:2.30.30.40 600 728 9.2E-36 T 11-10-2018 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 Pfam PF01584 CheW-like domain 606 733 5.9E-24 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 SMART SM00073 6 103 2.3E-20 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 SUPERFAMILY SSF50341 599 732 3.01E-30 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 SMART SM00387 457 600 4.1E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 460 599 4.4E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 353 412 3.1E-12 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 Gene3D G3DSA:3.30.565.10 413 599 3.3E-54 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 SMART SM01231 352 412 1.0E-16 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 SUPERFAMILY SSF47384 353 413 1.73E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 Gene3D G3DSA:2.40.50.180 623 687 9.2E-36 T 11-10-2018 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 597 1.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 516 1.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 554 1.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 578 1.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 SUPERFAMILY SSF47226 6 128 6.41E-33 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 SUPERFAMILY SSF55874 415 598 2.62E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 Gene3D G3DSA:1.20.120.160 3 146 2.9E-38 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_07390 c683462bd89b348dd8618c94d4599a47 739 Pfam PF01627 Hpt domain 8 99 3.7E-18 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_03290 26e34efdafd957056a0c49df50dbebc4 134 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMS64_03290 26e34efdafd957056a0c49df50dbebc4 134 TIGRFAM TIGR00586 mutt: mutator mutT protein 4 130 1.6E-40 T 11-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AMS64_03290 26e34efdafd957056a0c49df50dbebc4 134 PRINTS PR00502 NUDIX hydrolase family signature 36 50 2.3E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMS64_03290 26e34efdafd957056a0c49df50dbebc4 134 PRINTS PR00502 NUDIX hydrolase family signature 50 65 2.3E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMS64_03290 26e34efdafd957056a0c49df50dbebc4 134 PRINTS PR01401 Mutator MutT protein signature 5 26 6.8E-6 T 11-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AMS64_03290 26e34efdafd957056a0c49df50dbebc4 134 PRINTS PR01401 Mutator MutT protein signature 80 93 6.8E-6 T 11-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AMS64_03290 26e34efdafd957056a0c49df50dbebc4 134 SUPERFAMILY SSF55811 4 130 1.06E-34 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_03290 26e34efdafd957056a0c49df50dbebc4 134 Gene3D G3DSA:3.90.79.10 4 132 7.9E-36 T 11-10-2018 AMS64_03290 26e34efdafd957056a0c49df50dbebc4 134 Pfam PF00293 NUDIX domain 10 128 4.5E-19 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_19675 3c5934221721b9856465b349a83ef0c1 167 SMART SM00014 57 162 1.9E-18 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMS64_19675 3c5934221721b9856465b349a83ef0c1 167 Gene3D G3DSA:1.20.144.10 86 167 2.6E-17 T 11-10-2018 AMS64_19675 3c5934221721b9856465b349a83ef0c1 167 SUPERFAMILY SSF48317 4 164 1.2E-36 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMS64_19675 3c5934221721b9856465b349a83ef0c1 167 Pfam PF01569 PAP2 superfamily 61 164 7.0E-20 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMS64_16680 1ebbb065fe5e51f36b64a9c1def5829f 399 Pfam PF00482 Type II secretion system (T2SS), protein F 270 389 1.9E-23 T 11-10-2018 IPR018076 Type II secretion system F domain AMS64_16680 1ebbb065fe5e51f36b64a9c1def5829f 399 Pfam PF00482 Type II secretion system (T2SS), protein F 66 188 1.9E-21 T 11-10-2018 IPR018076 Type II secretion system F domain AMS64_16680 1ebbb065fe5e51f36b64a9c1def5829f 399 Gene3D G3DSA:1.20.81.30 251 364 1.3E-22 T 11-10-2018 AMS64_16680 1ebbb065fe5e51f36b64a9c1def5829f 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 1.5E-15 T 11-10-2018 IPR003004 GspF/PilC family AMS64_16680 1ebbb065fe5e51f36b64a9c1def5829f 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 61 73 1.5E-15 T 11-10-2018 IPR003004 GspF/PilC family AMS64_16680 1ebbb065fe5e51f36b64a9c1def5829f 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 160 188 1.5E-15 T 11-10-2018 IPR003004 GspF/PilC family AMS64_16680 1ebbb065fe5e51f36b64a9c1def5829f 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 1.5E-15 T 11-10-2018 IPR003004 GspF/PilC family AMS64_16680 1ebbb065fe5e51f36b64a9c1def5829f 399 Gene3D G3DSA:1.20.81.30 52 167 1.4E-18 T 11-10-2018 AMS64_00380 2818b9e6fb664db9472412f89644e9f4 146 Gene3D G3DSA:2.60.40.790 33 137 1.1E-19 T 11-10-2018 IPR008978 HSP20-like chaperone AMS64_00380 2818b9e6fb664db9472412f89644e9f4 146 SUPERFAMILY SSF49764 31 136 2.02E-18 T 11-10-2018 IPR008978 HSP20-like chaperone AMS64_00380 2818b9e6fb664db9472412f89644e9f4 146 Pfam PF00011 Hsp20/alpha crystallin family 41 136 4.3E-14 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AMS64_21235 f1608dbe15684af23f21f32b2f00c3d9 312 Gene3D G3DSA:3.40.91.100 134 306 5.7E-11 T 11-10-2018 AMS64_21235 f1608dbe15684af23f21f32b2f00c3d9 312 SUPERFAMILY SSF52980 170 289 1.55E-13 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMS64_21235 f1608dbe15684af23f21f32b2f00c3d9 312 Pfam PF04471 Restriction endonuclease 167 286 4.3E-36 T 11-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AMS64_21235 f1608dbe15684af23f21f32b2f00c3d9 312 Pfam PF14338 Mrr N-terminal domain 8 92 2.0E-26 T 11-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain AMS64_10975 66d58722be89d07cfbcc44fc1576aac0 640 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 10 134 9.7E-35 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AMS64_10975 66d58722be89d07cfbcc44fc1576aac0 640 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 283 622 1.7E-83 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AMS64_10975 66d58722be89d07cfbcc44fc1576aac0 640 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 149 2.0E-34 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMS64_10975 66d58722be89d07cfbcc44fc1576aac0 640 SUPERFAMILY SSF52794 171 261 9.59E-25 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AMS64_10975 66d58722be89d07cfbcc44fc1576aac0 640 Pfam PF02378 Phosphotransferase system, EIIC 296 544 1.6E-9 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMS64_10975 66d58722be89d07cfbcc44fc1576aac0 640 Gene3D G3DSA:3.40.50.2300 159 263 1.6E-26 T 11-10-2018 AMS64_10975 66d58722be89d07cfbcc44fc1576aac0 640 Gene3D G3DSA:3.40.930.10 2 150 7.9E-36 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_10975 66d58722be89d07cfbcc44fc1576aac0 640 SUPERFAMILY SSF55804 1 150 5.62E-34 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_10975 66d58722be89d07cfbcc44fc1576aac0 640 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMS64_10975 66d58722be89d07cfbcc44fc1576aac0 640 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 173 255 1.6E-10 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMS64_12760 58747b1585167a6794aa8d997b9712f2 306 SUPERFAMILY SSF161098 88 290 5.89E-18 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_12760 58747b1585167a6794aa8d997b9712f2 306 Gene3D G3DSA:1.10.3720.10 85 300 1.1E-18 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_12760 58747b1585167a6794aa8d997b9712f2 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 2.8E-37 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_06115 a58f2880f6eaa51c9816f3e128c2cb83 97 Pfam PF07023 Protein of unknown function (DUF1315) 11 88 1.8E-26 T 11-10-2018 IPR009749 Protein of unknown function DUF1315 AMS64_03070 b3feb3732b6b1dea92f2e97a186099a2 147 Pfam PF05130 FlgN protein 8 133 1.2E-21 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AMS64_03070 b3feb3732b6b1dea92f2e97a186099a2 147 SUPERFAMILY SSF140566 8 133 4.05E-28 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 AMS64_03070 b3feb3732b6b1dea92f2e97a186099a2 147 Gene3D G3DSA:1.20.58.300 6 134 1.3E-23 T 11-10-2018 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 ProSitePatterns PS00756 Protein secY signature 2. 170 187 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 2.4E-92 T 11-10-2018 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 2.4E-92 T 11-10-2018 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 151 176 2.4E-92 T 11-10-2018 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 2.4E-92 T 11-10-2018 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 177 200 2.4E-92 T 11-10-2018 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 369 387 2.4E-92 T 11-10-2018 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 314 336 2.4E-92 T 11-10-2018 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 401 419 2.4E-92 T 11-10-2018 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 2.4E-92 T 11-10-2018 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 PIRSF PIRSF004557 6 440 1.9E-120 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 Pfam PF00344 SecY translocase 75 416 5.3E-116 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 432 29.322 T 11-10-2018 IPR026593 Protein translocase subunit SecY AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 Gene3D G3DSA:1.10.3370.10 10 428 1.2E-158 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 SUPERFAMILY SSF103491 14 423 3.66E-130 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMS64_02060 61f53933c604de4d9fcbfd813b26b8a3 442 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 19 428 4.3E-134 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMS64_00870 7a2f22eef580c5fa09f5d6d22700a67a 254 Pfam PF00563 EAL domain 24 241 2.5E-49 T 11-10-2018 IPR001633 EAL domain AMS64_00870 7a2f22eef580c5fa09f5d6d22700a67a 254 SMART SM00052 1 250 5.1E-24 T 11-10-2018 IPR001633 EAL domain AMS64_00870 7a2f22eef580c5fa09f5d6d22700a67a 254 SUPERFAMILY SSF141868 24 241 2.22E-58 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_00870 7a2f22eef580c5fa09f5d6d22700a67a 254 Gene3D G3DSA:3.20.20.450 8 251 2.1E-63 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_06155 b5a1886eee1d4424ce1b64272ea27566 478 SMART SM00220 26 296 5.3E-11 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMS64_06155 b5a1886eee1d4424ce1b64272ea27566 478 Gene3D G3DSA:1.10.510.10 18 340 1.0E-28 T 11-10-2018 AMS64_06155 b5a1886eee1d4424ce1b64272ea27566 478 SUPERFAMILY SSF56112 15 287 1.91E-32 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMS64_06155 b5a1886eee1d4424ce1b64272ea27566 478 Pfam PF00069 Protein kinase domain 30 287 4.3E-23 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMS64_07565 d183aecea7814f1a003da6b24ba159dc 179 SUPERFAMILY SSF55729 1 140 1.89E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_07565 d183aecea7814f1a003da6b24ba159dc 179 Pfam PF00583 Acetyltransferase (GNAT) family 14 120 6.3E-9 T 11-10-2018 IPR000182 GNAT domain AMS64_07565 d183aecea7814f1a003da6b24ba159dc 179 Gene3D G3DSA:3.40.630.30 1 167 3.5E-45 T 11-10-2018 AMS64_11135 4a77d6b5ebc0f38bf3feb3fa46f844ec 202 SUPERFAMILY SSF89392 21 202 3.65E-50 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMS64_11135 4a77d6b5ebc0f38bf3feb3fa46f844ec 202 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 201 29.755 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AMS64_11135 4a77d6b5ebc0f38bf3feb3fa46f844ec 202 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 2 202 1.4E-60 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AMS64_11135 4a77d6b5ebc0f38bf3feb3fa46f844ec 202 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 1.5E-47 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AMS64_11135 4a77d6b5ebc0f38bf3feb3fa46f844ec 202 Gene3D G3DSA:2.50.20.10 18 202 1.3E-50 T 11-10-2018 AMS64_22485 dd99abb41f578243516a535f47bac98a 314 Pfam PF01063 Amino-transferase class IV 41 273 5.4E-51 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AMS64_22485 dd99abb41f578243516a535f47bac98a 314 Gene3D G3DSA:3.20.10.10 143 294 8.5E-103 T 11-10-2018 AMS64_22485 dd99abb41f578243516a535f47bac98a 314 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 15 312 3.3E-136 T 11-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 AMS64_22485 dd99abb41f578243516a535f47bac98a 314 SUPERFAMILY SSF56752 12 313 2.62E-103 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AMS64_22485 dd99abb41f578243516a535f47bac98a 314 Gene3D G3DSA:3.30.470.10 15 132 8.5E-103 T 11-10-2018 AMS64_22485 dd99abb41f578243516a535f47bac98a 314 ProSitePatterns PS00770 Aminotransferases class-IV signature. 199 228 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AMS64_16220 4ebe63aa077b21d7eebfac6b3ae707a7 250 Gene3D G3DSA:3.40.190.10 101 204 2.5E-27 T 11-10-2018 AMS64_16220 4ebe63aa077b21d7eebfac6b3ae707a7 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 239 1.3E-19 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_16220 4ebe63aa077b21d7eebfac6b3ae707a7 250 Gene3D G3DSA:3.40.190.10 27 238 2.5E-27 T 11-10-2018 AMS64_16220 4ebe63aa077b21d7eebfac6b3ae707a7 250 SUPERFAMILY SSF53850 17 239 7.06E-35 T 11-10-2018 AMS64_03075 b0ccb329cfb4650d163972cd9fc3bff1 91 Pfam PF04316 Anti-sigma-28 factor, FlgM 36 87 1.5E-10 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AMS64_03075 b0ccb329cfb4650d163972cd9fc3bff1 91 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 89 8.2E-18 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AMS64_03075 b0ccb329cfb4650d163972cd9fc3bff1 91 SUPERFAMILY SSF101498 1 88 1.31E-12 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily AMS64_20430 074bdae9d5761eaaa812308cfe5c0bc7 178 PRINTS PR01011 Glutathione peroxidase family signature 138 147 1.8E-10 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMS64_20430 074bdae9d5761eaaa812308cfe5c0bc7 178 PRINTS PR01011 Glutathione peroxidase family signature 42 59 1.8E-10 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMS64_20430 074bdae9d5761eaaa812308cfe5c0bc7 178 PRINTS PR01011 Glutathione peroxidase family signature 77 93 1.8E-10 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMS64_20430 074bdae9d5761eaaa812308cfe5c0bc7 178 SUPERFAMILY SSF52833 25 171 5.31E-39 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_20430 074bdae9d5761eaaa812308cfe5c0bc7 178 PIRSF PIRSF000303 1 177 7.7E-52 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMS64_20430 074bdae9d5761eaaa812308cfe5c0bc7 178 Pfam PF00255 Glutathione peroxidase 29 129 1.2E-25 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMS64_20430 074bdae9d5761eaaa812308cfe5c0bc7 178 Gene3D G3DSA:3.40.30.10 14 177 2.7E-43 T 11-10-2018 AMS64_00435 661dbc15eba8f6bc306360f85ad95bb1 252 SMART SM00062 27 248 6.5E-74 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_00435 661dbc15eba8f6bc306360f85ad95bb1 252 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 246 4.0E-61 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_00435 661dbc15eba8f6bc306360f85ad95bb1 252 SMART SM00079 27 247 0.0025 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AMS64_00435 661dbc15eba8f6bc306360f85ad95bb1 252 Gene3D G3DSA:3.40.190.10 94 206 8.9E-30 T 11-10-2018 AMS64_00435 661dbc15eba8f6bc306360f85ad95bb1 252 SUPERFAMILY SSF53850 5 249 3.19E-61 T 11-10-2018 AMS64_00505 17a6f12afd175d3def64ccc132403d1c 208 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 27.721 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMS64_00505 17a6f12afd175d3def64ccc132403d1c 208 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 203 3.6E-58 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMS64_00505 17a6f12afd175d3def64ccc132403d1c 208 Pfam PF02527 rRNA small subunit methyltransferase G 20 199 1.4E-62 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMS64_00505 17a6f12afd175d3def64ccc132403d1c 208 Gene3D G3DSA:3.40.50.150 1 205 1.4E-67 T 11-10-2018 AMS64_00505 17a6f12afd175d3def64ccc132403d1c 208 PIRSF PIRSF003078 1 207 1.3E-59 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMS64_00505 17a6f12afd175d3def64ccc132403d1c 208 SUPERFAMILY SSF53335 3 205 1.1E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_17720 2004857859f82296d5937300fe90c77e 381 SUPERFAMILY SSF52151 1 288 4.45E-48 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMS64_17720 2004857859f82296d5937300fe90c77e 381 Pfam PF01734 Patatin-like phospholipase 8 219 4.8E-20 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMS64_17720 2004857859f82296d5937300fe90c77e 381 Gene3D G3DSA:3.40.1090.10 114 272 4.9E-6 T 11-10-2018 AMS64_17720 2004857859f82296d5937300fe90c77e 381 Gene3D G3DSA:3.40.1090.10 1 103 4.0E-18 T 11-10-2018 AMS64_11020 c060b006e0bde9f923f9783b5db3c0c9 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 7.4E-143 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMS64_11020 c060b006e0bde9f923f9783b5db3c0c9 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 1.3E-158 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AMS64_11020 c060b006e0bde9f923f9783b5db3c0c9 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 35.601 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMS64_11020 c060b006e0bde9f923f9783b5db3c0c9 427 SUPERFAMILY SSF55205 1 423 3.01E-144 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMS64_11020 c060b006e0bde9f923f9783b5db3c0c9 427 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMS64_11020 c060b006e0bde9f923f9783b5db3c0c9 427 Gene3D G3DSA:3.65.10.10 242 418 6.6E-155 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMS64_11020 c060b006e0bde9f923f9783b5db3c0c9 427 Gene3D G3DSA:3.65.10.10 20 224 6.6E-155 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMS64_11020 c060b006e0bde9f923f9783b5db3c0c9 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMS64_11020 c060b006e0bde9f923f9783b5db3c0c9 427 PIRSF PIRSF000505 3 427 1.2E-156 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMS64_13435 41654bcee35d58c751742062ea764e34 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 7.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_13435 41654bcee35d58c751742062ea764e34 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 7.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_13435 41654bcee35d58c751742062ea764e34 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 101 7.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_13435 41654bcee35d58c751742062ea764e34 258 Gene3D G3DSA:3.40.50.1820 9 256 1.4E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_13435 41654bcee35d58c751742062ea764e34 258 SUPERFAMILY SSF53474 12 256 4.19E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_13435 41654bcee35d58c751742062ea764e34 258 Pfam PF00561 alpha/beta hydrolase fold 21 138 2.8E-18 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_05850 b3259202d77aa8bd1bdaf412720aaca8 701 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 31 701 1.1E-126 T 11-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 AMS64_05850 b3259202d77aa8bd1bdaf412720aaca8 701 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 149 4.4E-29 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMS64_05850 b3259202d77aa8bd1bdaf412720aaca8 701 Gene3D G3DSA:2.170.130.10 30 154 6.0E-36 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMS64_05850 b3259202d77aa8bd1bdaf412720aaca8 701 SUPERFAMILY SSF56935 27 701 4.68E-118 T 11-10-2018 AMS64_05850 b3259202d77aa8bd1bdaf412720aaca8 701 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 35 701 4.3E-129 T 11-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 AMS64_05850 b3259202d77aa8bd1bdaf412720aaca8 701 Pfam PF00593 TonB dependent receptor 242 699 3.2E-58 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMS64_05850 b3259202d77aa8bd1bdaf412720aaca8 701 Gene3D G3DSA:2.40.170.20 166 701 2.8E-93 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 SUPERFAMILY SSF46609 1 91 5.89E-35 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 Gene3D G3DSA:2.40.500.20 91 204 5.5E-46 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 165 172 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 90 2.7E-29 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 Gene3D G3DSA:1.10.287.990 20 90 3.7E-28 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 PIRSF PIRSF000349 1 204 7.7E-80 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 SUPERFAMILY SSF54719 89 202 1.19E-44 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 6.6E-26 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 PRINTS PR01703 Manganese superoxide dismutase signature 163 175 6.6E-26 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 6.6E-26 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 6.6E-26 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 PRINTS PR01703 Manganese superoxide dismutase signature 126 134 6.6E-26 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_03850 8b037f8f45d9e67b86e3e8000e0f04ca 204 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 198 7.8E-39 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMS64_10525 7db15b5028d91d954c21a562dea14b48 397 SUPERFAMILY SSF103473 16 384 4.58E-51 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_10525 7db15b5028d91d954c21a562dea14b48 397 Pfam PF07690 Major Facilitator Superfamily 25 328 1.9E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_10525 7db15b5028d91d954c21a562dea14b48 397 Gene3D G3DSA:1.20.1250.20 13 385 2.4E-47 T 11-10-2018 AMS64_07545 51cb0e2c368cdf3ca9f96f2ca4856f16 708 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 189 389 3.8E-28 T 11-10-2018 AMS64_07545 51cb0e2c368cdf3ca9f96f2ca4856f16 708 Gene3D G3DSA:3.40.390.10 189 412 1.8E-15 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMS64_07545 51cb0e2c368cdf3ca9f96f2ca4856f16 708 SUPERFAMILY SSF55486 190 405 2.05E-16 T 11-10-2018 AMS64_03635 8317ee0b856214ea18676dec62b1c66c 64 Pfam PF00403 Heavy-metal-associated domain 5 61 2.9E-15 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMS64_03635 8317ee0b856214ea18676dec62b1c66c 64 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AMS64_03635 8317ee0b856214ea18676dec62b1c66c 64 Gene3D G3DSA:3.30.70.100 2 64 2.9E-17 T 11-10-2018 AMS64_03635 8317ee0b856214ea18676dec62b1c66c 64 SUPERFAMILY SSF55008 1 63 1.57E-16 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AMS64_04080 9674c23f1e6cd9d4e22ccdf9e767ef87 680 SUPERFAMILY SSF52833 554 668 3.06E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_04080 9674c23f1e6cd9d4e22ccdf9e767ef87 680 Gene3D G3DSA:3.40.30.10 548 659 2.2E-11 T 11-10-2018 AMS64_04080 9674c23f1e6cd9d4e22ccdf9e767ef87 680 Pfam PF13899 Thioredoxin-like 560 644 1.7E-12 T 11-10-2018 AMS64_04080 9674c23f1e6cd9d4e22ccdf9e767ef87 680 Pfam PF11412 Disulphide bond corrector protein DsbC 38 141 4.4E-17 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AMS64_04080 9674c23f1e6cd9d4e22ccdf9e767ef87 680 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 283 485 2.2E-7 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AMS64_04080 9674c23f1e6cd9d4e22ccdf9e767ef87 680 ProSitePatterns PS00194 Thioredoxin family active site. 579 597 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMS64_12105 6497fb4556fe54782572657802547e71 163 Pfam PF05119 Phage terminase, small subunit 58 147 3.2E-24 T 11-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family AMS64_12105 6497fb4556fe54782572657802547e71 163 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 46 153 4.1E-25 T 11-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family AMS64_10415 943d11ba0f5b8e58c9cfbc9b9c3889cd 399 Gene3D G3DSA:3.40.50.2000 207 353 3.3E-36 T 11-10-2018 AMS64_10415 943d11ba0f5b8e58c9cfbc9b9c3889cd 399 Pfam PF13692 Glycosyl transferases group 1 219 347 8.0E-9 T 11-10-2018 AMS64_10415 943d11ba0f5b8e58c9cfbc9b9c3889cd 399 SUPERFAMILY SSF53756 95 376 5.76E-22 T 11-10-2018 AMS64_10995 4d2c87e0632941e387fe901f8002c2d3 158 Gene3D G3DSA:3.40.30.10 2 158 7.3E-67 T 11-10-2018 AMS64_10995 4d2c87e0632941e387fe901f8002c2d3 158 PRINTS PR01011 Glutathione peroxidase family signature 21 38 5.9E-21 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMS64_10995 4d2c87e0632941e387fe901f8002c2d3 158 PRINTS PR01011 Glutathione peroxidase family signature 56 72 5.9E-21 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMS64_10995 4d2c87e0632941e387fe901f8002c2d3 158 PRINTS PR01011 Glutathione peroxidase family signature 122 131 5.9E-21 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMS64_10995 4d2c87e0632941e387fe901f8002c2d3 158 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AMS64_10995 4d2c87e0632941e387fe901f8002c2d3 158 Pfam PF00255 Glutathione peroxidase 6 110 7.6E-42 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMS64_10995 4d2c87e0632941e387fe901f8002c2d3 158 SUPERFAMILY SSF52833 1 158 2.44E-63 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_10995 4d2c87e0632941e387fe901f8002c2d3 158 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 11-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 AMS64_10995 4d2c87e0632941e387fe901f8002c2d3 158 PIRSF PIRSF000303 2 158 4.1E-63 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMS64_02075 ea5b5cd39817459a65c73732625395cb 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02075 ea5b5cd39817459a65c73732625395cb 206 Gene3D G3DSA:3.10.290.10 103 191 2.3E-35 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMS64_02075 ea5b5cd39817459a65c73732625395cb 206 Gene3D G3DSA:1.10.1050.10 1 102 2.3E-45 T 11-10-2018 AMS64_02075 ea5b5cd39817459a65c73732625395cb 206 Pfam PF01479 S4 domain 97 143 4.4E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02075 ea5b5cd39817459a65c73732625395cb 206 SMART SM01390 3 95 9.1E-52 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AMS64_02075 ea5b5cd39817459a65c73732625395cb 206 SMART SM00363 96 160 3.8E-19 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02075 ea5b5cd39817459a65c73732625395cb 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.356 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMS64_02075 ea5b5cd39817459a65c73732625395cb 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 8.0E-86 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMS64_02075 ea5b5cd39817459a65c73732625395cb 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 5.2E-33 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AMS64_02075 ea5b5cd39817459a65c73732625395cb 206 SUPERFAMILY SSF55174 3 206 3.01E-72 T 11-10-2018 AMS64_16915 e1a805f4b82f9ed4a43b12b0311b722c 258 Gene3D G3DSA:3.40.50.880 46 234 9.4E-10 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_16915 e1a805f4b82f9ed4a43b12b0311b722c 258 SUPERFAMILY SSF52317 48 222 1.55E-13 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_16915 e1a805f4b82f9ed4a43b12b0311b722c 258 Pfam PF09825 Biotin-protein ligase, N terminal 39 227 4.1E-14 T 11-10-2018 IPR019197 Biotin-protein ligase, N-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMS64_00675 72079477c20788b2425ae7908500868b 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 117 2.7E-24 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMS64_00675 72079477c20788b2425ae7908500868b 125 TIGRFAM TIGR00494 crcB: protein CrcB 7 120 4.2E-30 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMS64_00675 72079477c20788b2425ae7908500868b 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 122 19.355 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMS64_09055 34bd11d0013ef4c5e50040de69ad1ae2 540 Pfam PF00501 AMP-binding enzyme 31 446 1.2E-90 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMS64_09055 34bd11d0013ef4c5e50040de69ad1ae2 540 SUPERFAMILY SSF56801 13 538 1.57E-134 T 11-10-2018 AMS64_09055 34bd11d0013ef4c5e50040de69ad1ae2 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 529 4.7E-23 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMS64_09055 34bd11d0013ef4c5e50040de69ad1ae2 540 Gene3D G3DSA:3.40.50.12780 8 441 2.0E-100 T 11-10-2018 AMS64_09055 34bd11d0013ef4c5e50040de69ad1ae2 540 Gene3D G3DSA:3.30.300.310 442 540 2.8E-35 T 11-10-2018 AMS64_03310 d4e375feeb521dcdb1600367493c797e 290 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 126 8.5E-35 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal AMS64_03310 d4e375feeb521dcdb1600367493c797e 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 227 242 5.4E-31 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AMS64_03310 d4e375feeb521dcdb1600367493c797e 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 215 226 5.4E-31 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AMS64_03310 d4e375feeb521dcdb1600367493c797e 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 147 164 5.4E-31 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AMS64_03310 d4e375feeb521dcdb1600367493c797e 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 204 214 5.4E-31 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AMS64_03310 d4e375feeb521dcdb1600367493c797e 290 Pfam PF01478 Type IV leader peptidase family 139 247 4.7E-29 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AMS64_02455 3f6b982ca7e2f4311545b336128d2e62 108 Pfam PF05106 Phage holin family (Lysis protein S) 4 101 6.6E-28 T 11-10-2018 IPR006481 Bacteriophage lambda, GpS, holin AMS64_02455 3f6b982ca7e2f4311545b336128d2e62 108 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 1 102 4.4E-37 T 11-10-2018 IPR006481 Bacteriophage lambda, GpS, holin AMS64_01745 ff076ec804527b4ef08155b7c801e2b8 100 SUPERFAMILY SSF46626 11 99 4.66E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_01745 ff076ec804527b4ef08155b7c801e2b8 100 Pfam PF00034 Cytochrome c 27 100 5.1E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_01745 ff076ec804527b4ef08155b7c801e2b8 100 Gene3D G3DSA:1.10.760.10 22 100 4.0E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_22320 b8a62df3e3fd89fcbfa89871edc0f2b8 167 PIRSF PIRSF001338 1 166 2.5E-61 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AMS64_22320 b8a62df3e3fd89fcbfa89871edc0f2b8 167 SUPERFAMILY SSF52255 4 164 8.5E-60 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AMS64_22320 b8a62df3e3fd89fcbfa89871edc0f2b8 167 Pfam PF00731 AIR carboxylase 6 153 1.6E-57 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMS64_22320 b8a62df3e3fd89fcbfa89871edc0f2b8 167 Gene3D G3DSA:3.40.50.7700 1 166 2.0E-65 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AMS64_22320 b8a62df3e3fd89fcbfa89871edc0f2b8 167 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 162 1.3E-58 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMS64_22320 b8a62df3e3fd89fcbfa89871edc0f2b8 167 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 159 30.279 T 11-10-2018 IPR033747 Class I PurE AMS64_22320 b8a62df3e3fd89fcbfa89871edc0f2b8 167 SMART SM01001 4 155 6.2E-88 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMS64_09160 af552bb4c32ec42fab8f8c7a9acd54da 345 Gene3D G3DSA:3.30.1330.10 1 159 1.1E-48 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMS64_09160 af552bb4c32ec42fab8f8c7a9acd54da 345 PIRSF PIRSF036407 1 343 9.1E-118 T 11-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AMS64_09160 af552bb4c32ec42fab8f8c7a9acd54da 345 SUPERFAMILY SSF55326 5 156 1.7E-40 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMS64_09160 af552bb4c32ec42fab8f8c7a9acd54da 345 Gene3D G3DSA:3.90.650.10 162 343 1.4E-54 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMS64_09160 af552bb4c32ec42fab8f8c7a9acd54da 345 TIGRFAM TIGR00476 selD: selenide, water dikinase 5 311 9.0E-138 T 11-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AMS64_09160 af552bb4c32ec42fab8f8c7a9acd54da 345 Hamap MF_00625 Selenide, water dikinase [selD]. 3 344 44.958 T 11-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AMS64_09160 af552bb4c32ec42fab8f8c7a9acd54da 345 SUPERFAMILY SSF56042 163 334 5.53E-55 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMS64_09160 af552bb4c32ec42fab8f8c7a9acd54da 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 48 155 1.2E-18 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AMS64_09160 af552bb4c32ec42fab8f8c7a9acd54da 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 167 336 4.9E-31 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AMS64_04715 699c89d131caf3a9a19c22ea4ca1293a 286 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 23 267 1.1E-91 T 11-10-2018 IPR021254 Protein of unknown function DUF2806 AMS64_04715 699c89d131caf3a9a19c22ea4ca1293a 286 Pfam PF10987 Protein of unknown function (DUF2806) 43 259 1.4E-73 T 11-10-2018 IPR021254 Protein of unknown function DUF2806 AMS64_16990 2c8a15f4ad8b083869f3848fcfa069b4 589 SMART SM00382 375 565 4.8E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_16990 2c8a15f4ad8b083869f3848fcfa069b4 589 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_16990 2c8a15f4ad8b083869f3848fcfa069b4 589 SUPERFAMILY SSF90123 3 334 4.45E-55 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_16990 2c8a15f4ad8b083869f3848fcfa069b4 589 Gene3D G3DSA:3.40.50.300 343 585 9.5E-68 T 11-10-2018 AMS64_16990 2c8a15f4ad8b083869f3848fcfa069b4 589 SUPERFAMILY SSF52540 361 580 2.52E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_16990 2c8a15f4ad8b083869f3848fcfa069b4 589 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 554 7.5E-188 T 11-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 AMS64_16990 2c8a15f4ad8b083869f3848fcfa069b4 589 Pfam PF00005 ABC transporter 369 512 4.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_16990 2c8a15f4ad8b083869f3848fcfa069b4 589 Pfam PF00664 ABC transporter transmembrane region 25 292 4.9E-41 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMS64_16990 2c8a15f4ad8b083869f3848fcfa069b4 589 Gene3D G3DSA:1.20.1560.10 1 335 6.4E-50 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_11025 2cc76f0877a8b4f1106a01053df8bb76 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 361 2.2E-153 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AMS64_11025 2cc76f0877a8b4f1106a01053df8bb76 362 Pfam PF00266 Aminotransferase class-V 5 350 9.9E-53 T 11-10-2018 IPR000192 Aminotransferase class V domain AMS64_11025 2cc76f0877a8b4f1106a01053df8bb76 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMS64_11025 2cc76f0877a8b4f1106a01053df8bb76 362 Gene3D G3DSA:3.90.1150.10 260 362 6.3E-42 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_11025 2cc76f0877a8b4f1106a01053df8bb76 362 PIRSF PIRSF000525 1 362 1.1E-147 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AMS64_11025 2cc76f0877a8b4f1106a01053df8bb76 362 SUPERFAMILY SSF53383 3 360 1.78E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_11025 2cc76f0877a8b4f1106a01053df8bb76 362 Gene3D G3DSA:3.40.640.10 17 259 3.6E-83 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_11025 2cc76f0877a8b4f1106a01053df8bb76 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 361 50.53 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AMS64_02155 2eced7682e09e93f7bf3028ff8d84a7a 228 Gene3D G3DSA:2.60.120.10 8 228 5.3E-82 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_02155 2eced7682e09e93f7bf3028ff8d84a7a 228 Pfam PF02678 Pirin 8 119 4.8E-33 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AMS64_02155 2eced7682e09e93f7bf3028ff8d84a7a 228 PIRSF PIRSF006232 1 226 1.5E-50 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AMS64_02155 2eced7682e09e93f7bf3028ff8d84a7a 228 SUPERFAMILY SSF51182 1 227 3.96E-71 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_02155 2eced7682e09e93f7bf3028ff8d84a7a 228 Gene3D G3DSA:2.60.120.10 11 135 5.3E-82 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_19620 87bf71732fc3732d474481a0f9547716 384 Pfam PF12698 ABC-2 family transporter protein 20 357 5.8E-36 T 11-10-2018 AMS64_19725 60c4ed594997e2c9991730a984a4b787 231 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 4 213 1.9E-79 T 11-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 AMS64_19725 60c4ed594997e2c9991730a984a4b787 231 Pfam PF00005 ABC transporter 19 157 4.6E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_19725 60c4ed594997e2c9991730a984a4b787 231 SUPERFAMILY SSF52540 1 220 2.92E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19725 60c4ed594997e2c9991730a984a4b787 231 Gene3D G3DSA:3.40.50.300 1 231 4.2E-62 T 11-10-2018 AMS64_19725 60c4ed594997e2c9991730a984a4b787 231 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_19725 60c4ed594997e2c9991730a984a4b787 231 SMART SM00382 24 207 2.7E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_03800 53eb62f6b8ea88a466767deb94703bbc 383 SUPERFAMILY SSF56796 3 381 5.5E-105 T 11-10-2018 AMS64_03800 53eb62f6b8ea88a466767deb94703bbc 383 Gene3D G3DSA:1.20.1090.10 181 382 6.9E-46 T 11-10-2018 AMS64_03800 53eb62f6b8ea88a466767deb94703bbc 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 363 9.2E-91 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AMS64_03800 53eb62f6b8ea88a466767deb94703bbc 383 Gene3D G3DSA:3.40.50.1970 1 180 1.7E-47 T 11-10-2018 AMS64_16875 2521df5b4827d1e4bdd67e4f43d772a2 544 Pfam PF04715 Anthranilate synthase component I, N terminal region 23 197 5.3E-19 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_16875 2521df5b4827d1e4bdd67e4f43d772a2 544 PRINTS PR00095 Anthranilate synthase component I signature 374 387 1.0E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_16875 2521df5b4827d1e4bdd67e4f43d772a2 544 PRINTS PR00095 Anthranilate synthase component I signature 469 483 1.0E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_16875 2521df5b4827d1e4bdd67e4f43d772a2 544 PRINTS PR00095 Anthranilate synthase component I signature 454 468 1.0E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_16875 2521df5b4827d1e4bdd67e4f43d772a2 544 PRINTS PR00095 Anthranilate synthase component I signature 360 373 1.0E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_16875 2521df5b4827d1e4bdd67e4f43d772a2 544 PIRSF PIRSF001373 1 531 2.8E-246 T 11-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_16875 2521df5b4827d1e4bdd67e4f43d772a2 544 SUPERFAMILY SSF56322 17 520 3.66E-151 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AMS64_16875 2521df5b4827d1e4bdd67e4f43d772a2 544 Gene3D G3DSA:3.60.120.10 8 527 1.4E-176 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AMS64_16875 2521df5b4827d1e4bdd67e4f43d772a2 544 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 21 524 2.2E-207 T 11-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_16875 2521df5b4827d1e4bdd67e4f43d772a2 544 Pfam PF00425 chorismate binding enzyme 252 512 2.7E-84 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AMS64_14415 f07615d4abdb61582d64009c033584ae 245 Pfam PF03411 Penicillin-insensitive murein endopeptidase 15 244 8.8E-87 T 11-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AMS64_14415 f07615d4abdb61582d64009c033584ae 245 Gene3D G3DSA:3.30.1380.10 4 245 6.5E-85 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMS64_14415 f07615d4abdb61582d64009c033584ae 245 PIRSF PIRSF018455 4 245 1.9E-89 T 11-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AMS64_14415 f07615d4abdb61582d64009c033584ae 245 SUPERFAMILY SSF55166 10 244 7.45E-83 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMS64_05450 e0debd152813ea819ae927485d86e272 535 SUPERFAMILY SSF46977 424 525 5.1E-31 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_05450 e0debd152813ea819ae927485d86e272 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 9 519 1.3E-210 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMS64_05450 e0debd152813ea819ae927485d86e272 535 PIRSF PIRSF000171 1 262 2.4E-26 T 11-10-2018 AMS64_05450 e0debd152813ea819ae927485d86e272 535 PIRSF PIRSF000171 335 534 7.4E-13 T 11-10-2018 AMS64_05450 e0debd152813ea819ae927485d86e272 535 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 369 376 9.4E-6 T 11-10-2018 AMS64_05450 e0debd152813ea819ae927485d86e272 535 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 9.4E-6 T 11-10-2018 AMS64_05450 e0debd152813ea819ae927485d86e272 535 Gene3D G3DSA:3.90.700.10 247 357 8.4E-157 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_05450 e0debd152813ea819ae927485d86e272 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 354 376 2.8E-11 T 11-10-2018 AMS64_05450 e0debd152813ea819ae927485d86e272 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.8E-11 T 11-10-2018 AMS64_05450 e0debd152813ea819ae927485d86e272 535 Pfam PF00890 FAD binding domain 10 391 7.3E-106 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_05450 e0debd152813ea819ae927485d86e272 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 520 1.2E-14 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_05450 e0debd152813ea819ae927485d86e272 535 Gene3D G3DSA:1.20.58.100 424 535 1.7E-44 T 11-10-2018 AMS64_05450 e0debd152813ea819ae927485d86e272 535 Gene3D G3DSA:3.50.50.60 10 403 8.4E-157 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_05450 e0debd152813ea819ae927485d86e272 535 SUPERFAMILY SSF56425 237 352 9.12E-43 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_05450 e0debd152813ea819ae927485d86e272 535 SUPERFAMILY SSF51905 9 446 5.19E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_18725 f2af46e9d9badeac985a0f5b00f302a5 189 SUPERFAMILY SSF50341 21 167 2.09E-36 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMS64_18725 f2af46e9d9badeac985a0f5b00f302a5 189 SMART SM00260 18 163 8.0E-34 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_18725 f2af46e9d9badeac985a0f5b00f302a5 189 Gene3D G3DSA:2.40.50.180 41 158 5.2E-39 T 11-10-2018 AMS64_18725 f2af46e9d9badeac985a0f5b00f302a5 189 Pfam PF01584 CheW-like domain 22 164 6.1E-35 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_18725 f2af46e9d9badeac985a0f5b00f302a5 189 Gene3D G3DSA:2.30.30.40 24 157 5.2E-39 T 11-10-2018 AMS64_08230 bef9481157cd24108b59e3d6d033456b 146 Pfam PF13673 Acetyltransferase (GNAT) domain 56 126 4.6E-14 T 11-10-2018 IPR000182 GNAT domain AMS64_08230 bef9481157cd24108b59e3d6d033456b 146 Gene3D G3DSA:3.40.630.30 1 145 1.1E-34 T 11-10-2018 AMS64_08230 bef9481157cd24108b59e3d6d033456b 146 SUPERFAMILY SSF55729 1 142 1.72E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_08050 55726679d3ad4d11aef399102f8ef631 387 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 384 3.9E-135 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMS64_08050 55726679d3ad4d11aef399102f8ef631 387 PIRSF PIRSF001434 1 387 5.8E-137 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMS64_08050 55726679d3ad4d11aef399102f8ef631 387 SUPERFAMILY SSF53383 22 386 6.59E-115 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_08050 55726679d3ad4d11aef399102f8ef631 387 Gene3D G3DSA:3.90.1150.10 253 387 2.4E-51 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_08050 55726679d3ad4d11aef399102f8ef631 387 Gene3D G3DSA:3.40.640.10 1 250 2.2E-84 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_08050 55726679d3ad4d11aef399102f8ef631 387 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 194 208 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMS64_18105 4e21a5fab5395d5e76f0b76e395889bb 78 Gene3D G3DSA:1.10.10.1130 1 78 6.0E-27 T 11-10-2018 AMS64_18105 4e21a5fab5395d5e76f0b76e395889bb 78 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 1.2E-25 T 11-10-2018 IPR021250 Protein of unknown function DUF2789 AMS64_16845 ced69ac1aef4805a13942b7f3ef1b502 242 Gene3D G3DSA:3.40.190.10 121 204 2.2E-7 T 11-10-2018 AMS64_16845 ced69ac1aef4805a13942b7f3ef1b502 242 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 76 207 3.7E-8 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_16845 ced69ac1aef4805a13942b7f3ef1b502 242 Gene3D G3DSA:3.40.190.10 78 120 2.2E-7 T 11-10-2018 AMS64_16845 ced69ac1aef4805a13942b7f3ef1b502 242 SUPERFAMILY SSF53850 41 235 2.17E-13 T 11-10-2018 AMS64_02885 c48da4e9749e718dc4c21272f59d94ee 121 Pfam PF14272 Glycine-rich SFCGS 4 117 4.0E-62 T 11-10-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 AMS64_02885 c48da4e9749e718dc4c21272f59d94ee 121 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 2.1E-67 T 11-10-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 AMS64_18995 46454c6e104bd8660f3fa042c5d334b6 149 Gene3D G3DSA:3.40.50.9100 1 149 3.9E-68 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMS64_18995 46454c6e104bd8660f3fa042c5d334b6 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.916 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMS64_18995 46454c6e104bd8660f3fa042c5d334b6 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 20 144 3.0E-65 T 11-10-2018 AMS64_18995 46454c6e104bd8660f3fa042c5d334b6 149 Pfam PF01220 Dehydroquinase class II 6 142 9.3E-63 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMS64_18995 46454c6e104bd8660f3fa042c5d334b6 149 SUPERFAMILY SSF52304 3 146 3.53E-63 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMS64_18995 46454c6e104bd8660f3fa042c5d334b6 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMS64_18995 46454c6e104bd8660f3fa042c5d334b6 149 PIRSF PIRSF001399 3 149 2.9E-61 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMS64_18995 46454c6e104bd8660f3fa042c5d334b6 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 1.0E-64 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMS64_01830 890f036fd76466829b2217ac2786bbd9 705 Pfam PF13502 AsmA-like C-terminal region 440 625 6.4E-11 T 11-10-2018 IPR032712 AsmA-like, C-terminal AMS64_04645 c51c69c5731894c3f66247041f96436c 729 Pfam PF02446 4-alpha-glucanotransferase 185 701 1.1E-125 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMS64_04645 c51c69c5731894c3f66247041f96436c 729 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 140 719 1.0E-184 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMS64_04645 c51c69c5731894c3f66247041f96436c 729 SUPERFAMILY SSF51445 169 720 6.65E-146 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_04645 c51c69c5731894c3f66247041f96436c 729 Gene3D G3DSA:3.20.20.80 181 721 3.8E-120 T 11-10-2018 AMS64_12325 2f8ce0d50d1c21d88748335d2faf6cce 184 PIRSF PIRSF000847 1 183 8.5E-49 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AMS64_12325 2f8ce0d50d1c21d88748335d2faf6cce 184 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 178 5.6E-60 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AMS64_12325 2f8ce0d50d1c21d88748335d2faf6cce 184 Gene3D G3DSA:1.20.120.1760 2 177 3.3E-18 T 11-10-2018 AMS64_12325 2f8ce0d50d1c21d88748335d2faf6cce 184 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 70 5.1E-19 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMS64_12325 2f8ce0d50d1c21d88748335d2faf6cce 184 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMS64_15785 390ed95479d656f51c52ca1f2bb551cc 248 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 1.7E-34 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMS64_15785 390ed95479d656f51c52ca1f2bb551cc 248 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 174 243 2.8E-21 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMS64_15785 390ed95479d656f51c52ca1f2bb551cc 248 SUPERFAMILY SSF117143 77 206 3.01E-16 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMS64_15785 390ed95479d656f51c52ca1f2bb551cc 248 Pfam PF00460 Flagella basal body rod protein 5 35 4.9E-8 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMS64_15785 390ed95479d656f51c52ca1f2bb551cc 248 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 225 6.2E-55 T 11-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 AMS64_15110 189acaee088cac486da0fd734bd4e38f 210 Pfam PF03458 UPF0126 domain 11 84 2.6E-21 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AMS64_15110 189acaee088cac486da0fd734bd4e38f 210 Pfam PF03458 UPF0126 domain 98 170 3.0E-22 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AMS64_06565 fdc179e06a10b608ae5045d425762f91 823 SUPERFAMILY SSF56601 212 797 1.11E-111 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMS64_06565 fdc179e06a10b608ae5045d425762f91 823 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 601 2.3E-19 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMS64_06565 fdc179e06a10b608ae5045d425762f91 823 Gene3D G3DSA:3.40.710.10 245 357 1.2E-7 T 11-10-2018 AMS64_06565 fdc179e06a10b608ae5045d425762f91 823 SUPERFAMILY SSF53955 44 258 4.5E-79 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_06565 fdc179e06a10b608ae5045d425762f91 823 Pfam PF00912 Transglycosylase 56 230 8.2E-61 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_06565 fdc179e06a10b608ae5045d425762f91 823 Pfam PF17092 Penicillin-binding protein OB-like domain 317 426 8.6E-29 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_06565 fdc179e06a10b608ae5045d425762f91 823 Gene3D G3DSA:1.10.3810.10 49 244 5.4E-76 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_06565 fdc179e06a10b608ae5045d425762f91 823 Gene3D G3DSA:3.40.710.10 401 801 2.1E-95 T 11-10-2018 AMS64_06565 fdc179e06a10b608ae5045d425762f91 823 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 751 1.1E-161 T 11-10-2018 AMS64_00540 4c98dc773763a60d4a4d09ab41f98b50 177 Gene3D G3DSA:1.10.520.20 2 106 2.2E-35 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00540 4c98dc773763a60d4a4d09ab41f98b50 177 SUPERFAMILY SSF47928 3 105 1.96E-25 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00540 4c98dc773763a60d4a4d09ab41f98b50 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.337 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00540 4c98dc773763a60d4a4d09ab41f98b50 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 1.4E-50 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00540 4c98dc773763a60d4a4d09ab41f98b50 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00540 4c98dc773763a60d4a4d09ab41f98b50 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 8.5E-57 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00540 4c98dc773763a60d4a4d09ab41f98b50 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 3.8E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00540 4c98dc773763a60d4a4d09ab41f98b50 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.8E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00540 4c98dc773763a60d4a4d09ab41f98b50 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 3.8E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00540 4c98dc773763a60d4a4d09ab41f98b50 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.8E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00540 4c98dc773763a60d4a4d09ab41f98b50 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.8E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_13950 6464692588498edc70c027ea52f7a297 605 Pfam PF06276 Ferric iron reductase FhuF-like transporter 396 550 4.9E-15 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain AMS64_13950 6464692588498edc70c027ea52f7a297 605 Pfam PF04183 IucA / IucC family 162 372 9.5E-32 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AMS64_13950 6464692588498edc70c027ea52f7a297 605 Gene3D G3DSA:1.10.510.40 362 537 3.1E-11 T 11-10-2018 AMS64_19010 af9381ab06750f959c201fc342f6bb87 87 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 2 77 2.0E-6 T 11-10-2018 IPR010398 Protein of unknown function DUF997 AMS64_19010 af9381ab06750f959c201fc342f6bb87 87 Pfam PF06196 Protein of unknown function (DUF997) 7 76 1.0E-21 T 11-10-2018 IPR010398 Protein of unknown function DUF997 AMS64_12840 f4e7ec15196d6747bf808c41295e8033 314 SUPERFAMILY SSF46785 19 125 1.5E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_12840 f4e7ec15196d6747bf808c41295e8033 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 4.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12840 f4e7ec15196d6747bf808c41295e8033 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 4.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12840 f4e7ec15196d6747bf808c41295e8033 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 4.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12840 f4e7ec15196d6747bf808c41295e8033 314 Gene3D G3DSA:3.40.190.10 114 305 8.1E-45 T 11-10-2018 AMS64_12840 f4e7ec15196d6747bf808c41295e8033 314 Gene3D G3DSA:3.40.190.10 174 280 8.1E-45 T 11-10-2018 AMS64_12840 f4e7ec15196d6747bf808c41295e8033 314 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 10 308 7.0E-147 T 11-10-2018 IPR011781 D-serine deaminase transcriptional activator AMS64_12840 f4e7ec15196d6747bf808c41295e8033 314 Pfam PF03466 LysR substrate binding domain 101 310 1.5E-30 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_12840 f4e7ec15196d6747bf808c41295e8033 314 Gene3D G3DSA:1.10.10.10 17 104 6.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_12840 f4e7ec15196d6747bf808c41295e8033 314 SUPERFAMILY SSF53850 101 313 2.53E-30 T 11-10-2018 AMS64_12840 f4e7ec15196d6747bf808c41295e8033 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 1.4E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_18760 831cc4c6ce19e5774b88937ce08b9b0d 316 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 253 310 9.2E-20 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_18760 831cc4c6ce19e5774b88937ce08b9b0d 316 SUPERFAMILY SSF88697 252 312 9.94E-14 T 11-10-2018 IPR015947 PUA-like superfamily AMS64_18760 831cc4c6ce19e5774b88937ce08b9b0d 316 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 13 220 5.2E-88 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_18760 831cc4c6ce19e5774b88937ce08b9b0d 316 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 182 249 4.9E-24 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AMS64_18760 831cc4c6ce19e5774b88937ce08b9b0d 316 Gene3D G3DSA:3.30.2350.10 2 250 8.1E-97 T 11-10-2018 AMS64_18760 831cc4c6ce19e5774b88937ce08b9b0d 316 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 12 310 19.452 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_18760 831cc4c6ce19e5774b88937ce08b9b0d 316 Gene3D G3DSA:2.30.130.10 251 314 6.5E-24 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AMS64_18760 831cc4c6ce19e5774b88937ce08b9b0d 316 SUPERFAMILY SSF55120 12 249 1.41E-84 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_18760 831cc4c6ce19e5774b88937ce08b9b0d 316 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 34 181 8.6E-58 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AMS64_02805 e4dbc7481ab9f891116e8fdd63401d7b 184 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 22 174 5.3E-55 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMS64_02805 e4dbc7481ab9f891116e8fdd63401d7b 184 PIRSF PIRSF006118 9 183 4.8E-67 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMS64_02805 e4dbc7481ab9f891116e8fdd63401d7b 184 Pfam PF08282 haloacid dehalogenase-like hydrolase 98 154 1.1E-7 T 11-10-2018 AMS64_02805 e4dbc7481ab9f891116e8fdd63401d7b 184 SUPERFAMILY SSF56784 18 175 1.12E-41 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_02805 e4dbc7481ab9f891116e8fdd63401d7b 184 Gene3D G3DSA:3.40.50.1000 2 180 6.5E-55 T 11-10-2018 IPR023214 HAD superfamily AMS64_06100 4dc1c9f19f45eee3105ec5f6b81671ad 623 SUPERFAMILY SSF58104 314 621 4.05E-75 T 11-10-2018 AMS64_06100 4dc1c9f19f45eee3105ec5f6b81671ad 623 Pfam PF00672 HAMP domain 294 339 8.2E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_06100 4dc1c9f19f45eee3105ec5f6b81671ad 623 Pfam PF02743 Cache domain 39 254 1.4E-17 T 11-10-2018 IPR033479 Double Cache domain 1 AMS64_06100 4dc1c9f19f45eee3105ec5f6b81671ad 623 SMART SM00304 292 346 3.2E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_06100 4dc1c9f19f45eee3105ec5f6b81671ad 623 Gene3D G3DSA:1.10.287.950 292 623 2.0E-70 T 11-10-2018 AMS64_06100 4dc1c9f19f45eee3105ec5f6b81671ad 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 589 6.4E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_06100 4dc1c9f19f45eee3105ec5f6b81671ad 623 Gene3D G3DSA:3.30.450.20 65 163 1.1E-46 T 11-10-2018 AMS64_06100 4dc1c9f19f45eee3105ec5f6b81671ad 623 SMART SM00283 365 622 1.4E-66 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_06100 4dc1c9f19f45eee3105ec5f6b81671ad 623 SUPERFAMILY SSF103190 84 171 1.06E-10 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMS64_06100 4dc1c9f19f45eee3105ec5f6b81671ad 623 Gene3D G3DSA:3.30.450.20 54 265 1.1E-46 T 11-10-2018 AMS64_13210 c76d7fffb7d5693ab40a502ae66fb84b 80 Pfam PF04728 Lipoprotein leucine-zipper 29 80 2.7E-17 T 11-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 AMS64_13210 c76d7fffb7d5693ab40a502ae66fb84b 80 PIRSF PIRSF002855 1 80 7.2E-23 T 11-10-2018 IPR016367 Murein-lipoprotein AMS64_13210 c76d7fffb7d5693ab40a502ae66fb84b 80 SUPERFAMILY SSF58042 18 79 7.33E-19 T 11-10-2018 AMS64_13210 c76d7fffb7d5693ab40a502ae66fb84b 80 Gene3D G3DSA:1.20.5.190 19 79 4.0E-19 T 11-10-2018 AMS64_09250 f5c6e9237e665a2979bee331c76a1d60 387 SUPERFAMILY SSF48208 8 381 8.64E-84 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMS64_09250 f5c6e9237e665a2979bee331c76a1d60 387 Gene3D G3DSA:1.50.10.10 2 382 3.2E-76 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMS64_09250 f5c6e9237e665a2979bee331c76a1d60 387 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 34 373 8.3E-56 T 11-10-2018 AMS64_18925 25a49e87f49b3748dd498575bf61f43f 149 Pfam PF03477 ATP cone domain 50 136 1.9E-17 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AMS64_18925 25a49e87f49b3748dd498575bf61f43f 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.4E-74 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMS64_18925 25a49e87f49b3748dd498575bf61f43f 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.746 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMS64_06900 91bf531046c1e5b404e8d697f08b9fe4 381 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 375 2.4E-128 T 11-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 AMS64_06900 91bf531046c1e5b404e8d697f08b9fe4 381 SUPERFAMILY SSF53383 1 375 3.8E-86 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_06900 91bf531046c1e5b404e8d697f08b9fe4 381 Gene3D G3DSA:3.90.1150.10 12 371 9.0E-128 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_06900 91bf531046c1e5b404e8d697f08b9fe4 381 Pfam PF00155 Aminotransferase class I and II 38 370 1.3E-27 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMS64_06900 91bf531046c1e5b404e8d697f08b9fe4 381 Gene3D G3DSA:3.40.640.10 63 285 9.0E-128 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_06870 1e51b81161add900ea6b0fcafa76a1a3 826 Gene3D G3DSA:1.50.10.10 322 821 8.8E-246 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMS64_06870 1e51b81161add900ea6b0fcafa76a1a3 826 Pfam PF01204 Trehalase 613 805 1.9E-11 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AMS64_06870 1e51b81161add900ea6b0fcafa76a1a3 826 SUPERFAMILY SSF48208 324 821 3.84E-86 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMS64_06870 1e51b81161add900ea6b0fcafa76a1a3 826 Gene3D G3DSA:1.10.287.100 276 314 2.4E-8 T 11-10-2018 AMS64_06870 1e51b81161add900ea6b0fcafa76a1a3 826 Gene3D G3DSA:3.30.1390.40 498 545 8.8E-246 T 11-10-2018 AMS64_06870 1e51b81161add900ea6b0fcafa76a1a3 826 Gene3D G3DSA:2.70.98.50 36 275 5.3E-74 T 11-10-2018 AMS64_12575 3a3502c57aa11af03d2e2feb613c3b2e 391 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 20 380 1.9E-107 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMS64_12575 3a3502c57aa11af03d2e2feb613c3b2e 391 Gene3D G3DSA:3.40.50.150 314 391 2.0E-10 T 11-10-2018 AMS64_12575 3a3502c57aa11af03d2e2feb613c3b2e 391 Gene3D G3DSA:3.40.50.150 17 274 2.3E-90 T 11-10-2018 AMS64_12575 3a3502c57aa11af03d2e2feb613c3b2e 391 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 19 35 4.4E-16 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMS64_12575 3a3502c57aa11af03d2e2feb613c3b2e 391 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 200 213 4.4E-16 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMS64_12575 3a3502c57aa11af03d2e2feb613c3b2e 391 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 146 160 4.4E-16 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMS64_12575 3a3502c57aa11af03d2e2feb613c3b2e 391 Pfam PF00145 C-5 cytosine-specific DNA methylase 18 380 4.4E-79 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMS64_12575 3a3502c57aa11af03d2e2feb613c3b2e 391 SUPERFAMILY SSF53335 18 384 7.31E-77 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_12575 3a3502c57aa11af03d2e2feb613c3b2e 391 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 363 381 - T 11-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AMS64_12575 3a3502c57aa11af03d2e2feb613c3b2e 391 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 98 110 - T 11-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 AMS64_17455 98706c11932623af75130593d833711c 238 Pfam PF03099 Biotin/lipoate A/B protein ligase family 63 166 7.3E-6 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMS64_17455 98706c11932623af75130593d833711c 238 Gene3D G3DSA:3.30.930.10 2 237 5.7E-50 T 11-10-2018 AMS64_17455 98706c11932623af75130593d833711c 238 SUPERFAMILY SSF55681 11 229 2.24E-44 T 11-10-2018 AMS64_03745 05e34c20123a53ba8b159bdc0cb5e938 156 Pfam PF01037 Lrp/AsnC ligand binding domain 71 143 2.7E-14 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMS64_03745 05e34c20123a53ba8b159bdc0cb5e938 156 SUPERFAMILY SSF54909 66 148 3.22E-15 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMS64_03745 05e34c20123a53ba8b159bdc0cb5e938 156 Gene3D G3DSA:1.10.10.10 1 57 2.3E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_03745 05e34c20123a53ba8b159bdc0cb5e938 156 Gene3D G3DSA:3.30.70.920 58 141 1.2E-19 T 11-10-2018 AMS64_03745 05e34c20123a53ba8b159bdc0cb5e938 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 5.1E-15 T 11-10-2018 AMS64_03745 05e34c20123a53ba8b159bdc0cb5e938 156 SMART SM00344 4 113 8.1E-26 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMS64_03745 05e34c20123a53ba8b159bdc0cb5e938 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 4.5E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMS64_03745 05e34c20123a53ba8b159bdc0cb5e938 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 4.5E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMS64_03745 05e34c20123a53ba8b159bdc0cb5e938 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 4.5E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMS64_03745 05e34c20123a53ba8b159bdc0cb5e938 156 SUPERFAMILY SSF46785 3 63 2.93E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_07280 4ef462be4232414f4bf1b74eff23f9f7 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 65 108 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_07280 4ef462be4232414f4bf1b74eff23f9f7 302 Pfam PF12833 Helix-turn-helix domain 34 114 3.2E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_07280 4ef462be4232414f4bf1b74eff23f9f7 302 SUPERFAMILY SSF55136 153 299 1.83E-23 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMS64_07280 4ef462be4232414f4bf1b74eff23f9f7 302 Gene3D G3DSA:3.20.80.10 151 301 4.1E-31 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMS64_07280 4ef462be4232414f4bf1b74eff23f9f7 302 SMART SM00342 28 112 3.3E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_07280 4ef462be4232414f4bf1b74eff23f9f7 302 SUPERFAMILY SSF46689 13 62 3.18E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_07280 4ef462be4232414f4bf1b74eff23f9f7 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 96 112 6.2E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_07280 4ef462be4232414f4bf1b74eff23f9f7 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 81 96 6.2E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_07280 4ef462be4232414f4bf1b74eff23f9f7 302 SMART SM00871 149 300 2.2E-22 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding AMS64_07280 4ef462be4232414f4bf1b74eff23f9f7 302 SUPERFAMILY SSF46689 65 115 1.97E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_07280 4ef462be4232414f4bf1b74eff23f9f7 302 Gene3D G3DSA:1.10.10.60 9 118 2.5E-29 T 11-10-2018 AMS64_07280 4ef462be4232414f4bf1b74eff23f9f7 302 Pfam PF06445 GyrI-like small molecule binding domain 154 299 4.9E-22 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain AMS64_18200 aa166ac6c26bf722b76a358428231859 317 Gene3D G3DSA:3.40.50.720 19 190 2.9E-36 T 11-10-2018 AMS64_18200 aa166ac6c26bf722b76a358428231859 317 SUPERFAMILY SSF51735 19 189 2.36E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_18200 aa166ac6c26bf722b76a358428231859 317 Gene3D G3DSA:1.10.1040.10 191 314 3.0E-41 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMS64_18200 aa166ac6c26bf722b76a358428231859 317 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 20 314 2.1E-70 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AMS64_18200 aa166ac6c26bf722b76a358428231859 317 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 192 313 6.2E-36 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain AMS64_18200 aa166ac6c26bf722b76a358428231859 317 Pfam PF02558 Ketopantoate reductase PanE/ApbA 22 166 2.8E-26 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain AMS64_18200 aa166ac6c26bf722b76a358428231859 317 SUPERFAMILY SSF48179 193 313 4.08E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_14640 8a9eda5cddac1d371d5bc3c735d31da2 249 Gene3D G3DSA:3.40.50.1000 5 231 6.8E-79 T 11-10-2018 IPR023214 HAD superfamily AMS64_14640 8a9eda5cddac1d371d5bc3c735d31da2 249 Pfam PF13344 Haloacid dehalogenase-like hydrolase 5 104 2.8E-22 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMS64_14640 8a9eda5cddac1d371d5bc3c735d31da2 249 Gene3D G3DSA:3.40.50.1000 70 173 6.8E-79 T 11-10-2018 IPR023214 HAD superfamily AMS64_14640 8a9eda5cddac1d371d5bc3c735d31da2 249 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 5 222 1.6E-56 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMS64_14640 8a9eda5cddac1d371d5bc3c735d31da2 249 Pfam PF13242 HAD-hyrolase-like 173 245 9.6E-20 T 11-10-2018 AMS64_14640 8a9eda5cddac1d371d5bc3c735d31da2 249 SUPERFAMILY SSF56784 1 246 1.57E-60 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_07380 cd6d24dbf0062d5f7c5b54e64edb004b 127 SMART SM00448 5 119 1.1E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_07380 cd6d24dbf0062d5f7c5b54e64edb004b 127 SUPERFAMILY SSF52172 3 125 1.34E-36 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_07380 cd6d24dbf0062d5f7c5b54e64edb004b 127 Pfam PF00072 Response regulator receiver domain 7 119 1.5E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_07380 cd6d24dbf0062d5f7c5b54e64edb004b 127 Gene3D G3DSA:3.40.50.2300 1 126 4.4E-40 T 11-10-2018 AMS64_02460 ea42b2b50e02d1cf55a69c1e00afccd5 69 SUPERFAMILY SSF57716 35 67 1.85E-7 T 11-10-2018 AMS64_02460 ea42b2b50e02d1cf55a69c1e00afccd5 69 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 2 65 1.8E-19 T 11-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AMS64_02460 ea42b2b50e02d1cf55a69c1e00afccd5 69 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 66 1.0E-11 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMS64_02460 ea42b2b50e02d1cf55a69c1e00afccd5 69 Gene3D G3DSA:1.20.120.910 1 67 2.6E-17 T 11-10-2018 AMS64_02460 ea42b2b50e02d1cf55a69c1e00afccd5 69 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 36 60 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 SUPERFAMILY SSF82866 412 607 2.35E-41 T 11-10-2018 AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 603 9.5E-148 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 Pfam PF07549 SecD/SecF GG Motif 116 140 1.2E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 Gene3D G3DSA:1.20.1640.10 453 605 3.1E-6 T 11-10-2018 AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 Pfam PF13721 SecD export protein N-terminal TM region 2 103 4.3E-36 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 Gene3D G3DSA:3.30.70.3400 219 439 5.0E-52 T 11-10-2018 AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 617 47.842 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 347 596 4.6E-82 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 Pfam PF02355 Protein export membrane protein 435 603 3.2E-20 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 PRINTS PR00702 Acriflavin resistance protein family signature 580 603 1.6E-6 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 PRINTS PR00702 Acriflavin resistance protein family signature 505 529 1.6E-6 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 1.6E-6 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_11705 3c0586debef7cf2a1117324caa0b50ca 617 Gene3D G3DSA:3.30.1360.200 280 433 5.0E-52 T 11-10-2018 AMS64_15185 4bc9866234ccc946b0d11e86035b1a95 306 Pfam PF05661 Protein of unknown function (DUF808) 4 294 2.0E-114 T 11-10-2018 IPR008526 Inner membrane protein YedI AMS64_15185 4bc9866234ccc946b0d11e86035b1a95 306 PIRSF PIRSF016660 1 305 3.2E-120 T 11-10-2018 IPR008526 Inner membrane protein YedI AMS64_15770 a7ba0d3067942275ce8adde67195a898 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 365 38.687 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_15770 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 252 264 7.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_15770 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 56 71 7.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_15770 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 121 139 7.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_15770 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 188 206 7.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_15770 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 82 101 7.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_15770 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 162 180 7.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_15770 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 38 53 7.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_15770 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 23 38 7.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_15770 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 104 121 7.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_15770 a7ba0d3067942275ce8adde67195a898 365 Pfam PF02119 Flagellar P-ring protein 23 364 6.5E-137 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMS64_04430 f76a9bc10a4300a1f11db63f8724f807 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04430 f76a9bc10a4300a1f11db63f8724f807 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04430 f76a9bc10a4300a1f11db63f8724f807 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04430 f76a9bc10a4300a1f11db63f8724f807 299 SUPERFAMILY SSF53850 87 295 7.24E-24 T 11-10-2018 AMS64_04430 f76a9bc10a4300a1f11db63f8724f807 299 Gene3D G3DSA:1.10.10.10 1 85 2.4E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_04430 f76a9bc10a4300a1f11db63f8724f807 299 SUPERFAMILY SSF46785 4 110 4.21E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_04430 f76a9bc10a4300a1f11db63f8724f807 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.2E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04430 f76a9bc10a4300a1f11db63f8724f807 299 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 48.009 T 11-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria AMS64_04430 f76a9bc10a4300a1f11db63f8724f807 299 Pfam PF03466 LysR substrate binding domain 88 293 1.5E-16 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_04430 f76a9bc10a4300a1f11db63f8724f807 299 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 5.3E-113 T 11-10-2018 IPR017685 HTH-type transcriptional regulator ArgP AMS64_04430 f76a9bc10a4300a1f11db63f8724f807 299 Gene3D G3DSA:3.40.190.290 90 296 2.1E-67 T 11-10-2018 AMS64_18495 4f235cc721c7c17d46af3b1cbb215e9b 115 TIGRFAM TIGR03184 DNA_S_dndE: DNA sulfur modification protein DndE 6 104 1.5E-28 T 11-10-2018 IPR014969 DNA sulphur modification protein DndE AMS64_18495 4f235cc721c7c17d46af3b1cbb215e9b 115 Gene3D G3DSA:1.10.1220.160 1 106 1.4E-45 T 11-10-2018 IPR038472 DndE superfamily AMS64_18495 4f235cc721c7c17d46af3b1cbb215e9b 115 Pfam PF08870 DNA sulphur modification protein DndE 5 107 2.7E-31 T 11-10-2018 IPR014969 DNA sulphur modification protein DndE AMS64_11075 275e6d12a3c53a515b28f566d7030c77 546 Pfam PF00990 Diguanylate cyclase, GGDEF domain 116 266 3.1E-18 T 11-10-2018 IPR000160 GGDEF domain AMS64_11075 275e6d12a3c53a515b28f566d7030c77 546 Pfam PF00563 EAL domain 292 522 1.4E-49 T 11-10-2018 IPR001633 EAL domain AMS64_11075 275e6d12a3c53a515b28f566d7030c77 546 Gene3D G3DSA:3.20.20.450 284 531 6.3E-51 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_11075 275e6d12a3c53a515b28f566d7030c77 546 Gene3D G3DSA:3.30.70.270 99 274 7.9E-24 T 11-10-2018 AMS64_11075 275e6d12a3c53a515b28f566d7030c77 546 SMART SM00052 284 527 2.3E-29 T 11-10-2018 IPR001633 EAL domain AMS64_11075 275e6d12a3c53a515b28f566d7030c77 546 SMART SM00267 105 274 4.1E-10 T 11-10-2018 IPR000160 GGDEF domain AMS64_11075 275e6d12a3c53a515b28f566d7030c77 546 SUPERFAMILY SSF141868 291 526 3.79E-53 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_11075 275e6d12a3c53a515b28f566d7030c77 546 SUPERFAMILY SSF55073 121 273 1.57E-16 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_18765 f28042b11cfb46107f8f7294631772f3 145 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 100 3.0E-34 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMS64_18765 f28042b11cfb46107f8f7294631772f3 145 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AMS64_18765 f28042b11cfb46107f8f7294631772f3 145 Gene3D G3DSA:3.30.300.20 1 108 3.8E-40 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMS64_18765 f28042b11cfb46107f8f7294631772f3 145 Pfam PF02033 Ribosome-binding factor A 7 112 4.8E-32 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMS64_18765 f28042b11cfb46107f8f7294631772f3 145 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 113 26.889 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMS64_18765 f28042b11cfb46107f8f7294631772f3 145 SUPERFAMILY SSF89919 2 107 6.54E-34 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily AMS64_18765 f28042b11cfb46107f8f7294631772f3 145 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 117 6.5E-40 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMS64_15850 102525a998c9ef35e0d0ed81ba7b0691 230 Pfam PF01479 S4 domain 1 44 6.8E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_15850 102525a998c9ef35e0d0ed81ba7b0691 230 Gene3D G3DSA:3.30.70.1560 128 209 3.3E-60 T 11-10-2018 AMS64_15850 102525a998c9ef35e0d0ed81ba7b0691 230 SUPERFAMILY SSF55174 1 81 4.71E-15 T 11-10-2018 AMS64_15850 102525a998c9ef35e0d0ed81ba7b0691 230 SMART SM00363 1 60 3.5E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_15850 102525a998c9ef35e0d0ed81ba7b0691 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMS64_15850 102525a998c9ef35e0d0ed81ba7b0691 230 Gene3D G3DSA:3.10.290.10 1 62 4.1E-19 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMS64_15850 102525a998c9ef35e0d0ed81ba7b0691 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 1.0E-49 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMS64_15850 102525a998c9ef35e0d0ed81ba7b0691 230 Pfam PF00849 RNA pseudouridylate synthase 62 192 8.4E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_15850 102525a998c9ef35e0d0ed81ba7b0691 230 SUPERFAMILY SSF55120 61 227 2.16E-46 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_15850 102525a998c9ef35e0d0ed81ba7b0691 230 Gene3D G3DSA:3.30.70.580 63 227 3.3E-60 T 11-10-2018 AMS64_21340 c8d2bb559bfef49d4fd666b225ee0900 195 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 183 5.0E-53 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMS64_21340 c8d2bb559bfef49d4fd666b225ee0900 195 PIRSF PIRSF006305 1 194 1.3E-50 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMS64_21340 c8d2bb559bfef49d4fd666b225ee0900 195 Gene3D G3DSA:3.90.950.10 8 192 7.3E-67 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMS64_21340 c8d2bb559bfef49d4fd666b225ee0900 195 Hamap MF_00528 Septum formation protein Maf [maf]. 8 194 30.592 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMS64_21340 c8d2bb559bfef49d4fd666b225ee0900 195 Pfam PF02545 Maf-like protein 8 188 1.4E-56 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMS64_21340 c8d2bb559bfef49d4fd666b225ee0900 195 SUPERFAMILY SSF52972 7 187 1.96E-59 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMS64_12860 85729da6a368b88b216bf8557f74a2a7 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_12860 85729da6a368b88b216bf8557f74a2a7 291 SMART SM00342 194 277 7.0E-31 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_12860 85729da6a368b88b216bf8557f74a2a7 291 SUPERFAMILY SSF46689 180 227 2.51E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_12860 85729da6a368b88b216bf8557f74a2a7 291 Gene3D G3DSA:1.10.10.60 177 227 1.9E-11 T 11-10-2018 AMS64_12860 85729da6a368b88b216bf8557f74a2a7 291 SUPERFAMILY SSF46689 230 278 4.4E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_12860 85729da6a368b88b216bf8557f74a2a7 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 1.3E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_12860 85729da6a368b88b216bf8557f74a2a7 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 1.3E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_12860 85729da6a368b88b216bf8557f74a2a7 291 Gene3D G3DSA:1.10.10.60 228 281 1.8E-19 T 11-10-2018 AMS64_12860 85729da6a368b88b216bf8557f74a2a7 291 Pfam PF12833 Helix-turn-helix domain 200 277 5.7E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_02360 1abfb3add0f5ca94ee5d29bdadfc6f80 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.4E-131 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AMS64_02360 1abfb3add0f5ca94ee5d29bdadfc6f80 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 5.9E-70 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AMS64_11755 54229b861fddec81bc32b9b155b9131d 275 Gene3D G3DSA:3.30.420.10 106 256 3.1E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_11755 54229b861fddec81bc32b9b155b9131d 275 SUPERFAMILY SSF53098 102 262 5.77E-40 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_11755 54229b861fddec81bc32b9b155b9131d 275 Pfam PF00665 Integrase core domain 108 223 6.8E-32 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_11755 54229b861fddec81bc32b9b155b9131d 275 Pfam PF13276 HTH-like domain 33 83 4.3E-8 T 11-10-2018 IPR025948 HTH-like domain AMS64_02235 9ee436a38052e26fec3e01a341c9fa2a 544 Gene3D G3DSA:3.30.70.270 350 518 3.0E-42 T 11-10-2018 AMS64_02235 9ee436a38052e26fec3e01a341c9fa2a 544 SMART SM00267 352 518 1.2E-37 T 11-10-2018 IPR000160 GGDEF domain AMS64_02235 9ee436a38052e26fec3e01a341c9fa2a 544 Pfam PF02743 Cache domain 62 274 5.7E-21 T 11-10-2018 IPR033479 Double Cache domain 1 AMS64_02235 9ee436a38052e26fec3e01a341c9fa2a 544 SUPERFAMILY SSF55073 368 517 7.85E-37 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_02235 9ee436a38052e26fec3e01a341c9fa2a 544 Gene3D G3DSA:3.30.450.20 107 188 2.2E-26 T 11-10-2018 AMS64_02235 9ee436a38052e26fec3e01a341c9fa2a 544 SUPERFAMILY SSF103190 105 196 8.83E-8 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMS64_02235 9ee436a38052e26fec3e01a341c9fa2a 544 Gene3D G3DSA:3.30.450.20 189 274 2.2E-26 T 11-10-2018 AMS64_02235 9ee436a38052e26fec3e01a341c9fa2a 544 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 515 5.2E-34 T 11-10-2018 IPR000160 GGDEF domain AMS64_02235 9ee436a38052e26fec3e01a341c9fa2a 544 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 514 2.5E-31 T 11-10-2018 IPR000160 GGDEF domain AMS64_12345 a94e17a277b00f56a994fa8f392d2bbc 62 Gene3D G3DSA:2.20.25.10 10 62 1.1E-21 T 11-10-2018 AMS64_12345 a94e17a277b00f56a994fa8f392d2bbc 62 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 56 26.557 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 AMS64_12345 a94e17a277b00f56a994fa8f392d2bbc 62 Pfam PF03966 Trm112p-like protein 5 43 2.5E-8 T 11-10-2018 IPR005651 Trm112-like AMS64_12345 a94e17a277b00f56a994fa8f392d2bbc 62 SUPERFAMILY SSF158997 2 58 6.02E-19 T 11-10-2018 AMS64_02630 9c40727c3cb91ea91324f2676126e479 680 Pfam PF00593 TonB dependent receptor 228 679 7.8E-54 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMS64_02630 9c40727c3cb91ea91324f2676126e479 680 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 146 4.7E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMS64_02630 9c40727c3cb91ea91324f2676126e479 680 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 34 - T 11-10-2018 IPR010916 TonB box, conserved site AMS64_02630 9c40727c3cb91ea91324f2676126e479 680 Gene3D G3DSA:2.40.170.20 156 680 5.8E-109 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMS64_02630 9c40727c3cb91ea91324f2676126e479 680 SUPERFAMILY SSF56935 43 680 4.58E-125 T 11-10-2018 AMS64_02630 9c40727c3cb91ea91324f2676126e479 680 Gene3D G3DSA:2.170.130.10 34 155 4.7E-33 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMS64_02630 9c40727c3cb91ea91324f2676126e479 680 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 663 680 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AMS64_02630 9c40727c3cb91ea91324f2676126e479 680 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 54 680 9.2E-106 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AMS64_03430 a440e016b55022d1f04a230437025caa 123 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 112 7.6E-26 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMS64_03430 a440e016b55022d1f04a230437025caa 123 Pfam PF02152 Dihydroneopterin aldolase 4 112 1.3E-29 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMS64_03430 a440e016b55022d1f04a230437025caa 123 Gene3D G3DSA:3.30.1130.10 1 117 7.0E-39 T 11-10-2018 AMS64_03430 a440e016b55022d1f04a230437025caa 123 SUPERFAMILY SSF55620 1 116 7.23E-34 T 11-10-2018 AMS64_03430 a440e016b55022d1f04a230437025caa 123 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 3.6E-32 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMS64_03430 a440e016b55022d1f04a230437025caa 123 SMART SM00905 4 114 4.0E-46 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMS64_17045 4ff19ed75f6bdc0ded50432836b787ee 142 Gene3D G3DSA:3.40.630.30 1 139 5.1E-34 T 11-10-2018 AMS64_17045 4ff19ed75f6bdc0ded50432836b787ee 142 Pfam PF13673 Acetyltransferase (GNAT) domain 34 140 1.8E-17 T 11-10-2018 IPR000182 GNAT domain AMS64_17045 4ff19ed75f6bdc0ded50432836b787ee 142 SUPERFAMILY SSF55729 1 128 6.62E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_08355 add5fa15bbed3c7aa24b2acd881a07ab 226 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 223 2.0E-116 T 11-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein AMS64_08355 add5fa15bbed3c7aa24b2acd881a07ab 226 Gene3D G3DSA:3.30.70.20 42 217 6.9E-57 T 11-10-2018 AMS64_08355 add5fa15bbed3c7aa24b2acd881a07ab 226 Gene3D G3DSA:3.30.70.20 103 156 6.9E-57 T 11-10-2018 AMS64_08355 add5fa15bbed3c7aa24b2acd881a07ab 226 Pfam PF13247 4Fe-4S dicluster domain 89 186 4.6E-24 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_08355 add5fa15bbed3c7aa24b2acd881a07ab 226 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_08355 add5fa15bbed3c7aa24b2acd881a07ab 226 SUPERFAMILY SSF54862 41 220 7.64E-60 T 11-10-2018 AMS64_10075 c687c9a462a6ec7d4e65812bd03bc4b1 95 Pfam PF01386 Ribosomal L25p family 6 92 1.9E-24 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMS64_10075 c687c9a462a6ec7d4e65812bd03bc4b1 95 SUPERFAMILY SSF50715 3 95 8.2E-31 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMS64_10075 c687c9a462a6ec7d4e65812bd03bc4b1 95 Gene3D G3DSA:2.40.240.10 2 95 4.1E-33 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMS64_10075 c687c9a462a6ec7d4e65812bd03bc4b1 95 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 95 4.1E-23 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMS64_10075 c687c9a462a6ec7d4e65812bd03bc4b1 95 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 95 26.314 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMS64_10075 c687c9a462a6ec7d4e65812bd03bc4b1 95 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 95 7.0E-45 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMS64_01095 a10757b7ee52dc0361d99063a8f2b80c 151 Pfam PF09722 Protein of unknown function (DUF2384) 98 148 4.0E-9 T 11-10-2018 IPR024467 Domain of unknown function DUF2384 AMS64_01095 a10757b7ee52dc0361d99063a8f2b80c 151 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 26 149 6.2E-20 T 11-10-2018 IPR011979 Conserved hypothetical protein CHP02293 AMS64_05845 b0ae8fd836438d7a2632e0728ca52893 325 Gene3D G3DSA:3.40.50.11550 46 271 3.5E-26 T 11-10-2018 AMS64_05845 b0ae8fd836438d7a2632e0728ca52893 325 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 53 259 3.1E-56 T 11-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN AMS64_05845 b0ae8fd836438d7a2632e0728ca52893 325 SUPERFAMILY SSF159501 43 289 6.8E-65 T 11-10-2018 AMS64_05845 b0ae8fd836438d7a2632e0728ca52893 325 PIRSF PIRSF020419 1 305 1.5E-55 T 11-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted AMS64_05845 b0ae8fd836438d7a2632e0728ca52893 325 Gene3D G3DSA:1.10.8.760 158 222 3.5E-26 T 11-10-2018 AMS64_18845 ff112221fc91736cae341e45e4b86342 252 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site AMS64_18845 ff112221fc91736cae341e45e4b86342 252 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 211 3.0E-21 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMS64_20100 73850ca4f6ee5a98db1769dac4b9071f 257 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 257 53.894 T 11-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AMS64_20100 73850ca4f6ee5a98db1769dac4b9071f 257 SUPERFAMILY SSF51569 5 243 2.51E-80 T 11-10-2018 AMS64_20100 73850ca4f6ee5a98db1769dac4b9071f 257 Gene3D G3DSA:3.20.20.70 1 257 1.5E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_20100 73850ca4f6ee5a98db1769dac4b9071f 257 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 226 6.6E-78 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AMS64_20100 73850ca4f6ee5a98db1769dac4b9071f 257 SMART SM01133 10 243 3.2E-80 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AMS64_20100 73850ca4f6ee5a98db1769dac4b9071f 257 Pfam PF01791 DeoC/LacD family aldolase 12 241 1.8E-47 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AMS64_20100 73850ca4f6ee5a98db1769dac4b9071f 257 PIRSF PIRSF001357 5 251 2.7E-74 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AMS64_02730 03c149df6f30cddc8d0668d775c4cc90 236 Gene3D G3DSA:1.20.120.1600 24 110 1.2E-54 T 11-10-2018 AMS64_02730 03c149df6f30cddc8d0668d775c4cc90 236 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 5.0E-15 T 11-10-2018 AMS64_02730 03c149df6f30cddc8d0668d775c4cc90 236 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 200 1.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_02730 03c149df6f30cddc8d0668d775c4cc90 236 Gene3D G3DSA:3.40.50.1000 12 228 1.2E-54 T 11-10-2018 IPR023214 HAD superfamily AMS64_02730 03c149df6f30cddc8d0668d775c4cc90 236 SUPERFAMILY SSF56784 11 235 2.97E-38 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_05995 2710cdc197cd1d329ef3f5296b629f23 815 Pfam PF02687 FtsX-like permease family 278 368 3.1E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMS64_08840 a6b7222d317b9436315777033c7e4917 92 Gene3D G3DSA:3.10.510.20 1 74 3.5E-27 T 11-10-2018 IPR038068 YcgL-like superfamily AMS64_08840 a6b7222d317b9436315777033c7e4917 92 Pfam PF05166 YcgL domain 3 75 2.8E-29 T 11-10-2018 IPR027354 YcgL domain AMS64_08840 a6b7222d317b9436315777033c7e4917 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 26.834 T 11-10-2018 IPR027354 YcgL domain AMS64_08840 a6b7222d317b9436315777033c7e4917 92 SUPERFAMILY SSF160191 1 89 3.66E-35 T 11-10-2018 IPR038068 YcgL-like superfamily AMS64_08840 a6b7222d317b9436315777033c7e4917 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 6.0E-23 T 11-10-2018 IPR027354 YcgL domain AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 Pfam PF00106 short chain dehydrogenase 2 186 3.4E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 Gene3D G3DSA:3.40.50.720 1 235 1.6E-67 T 11-10-2018 AMS64_03785 4b945f2487079f0fcf2fda2fc9ca07f3 248 SUPERFAMILY SSF51735 2 231 1.31E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_12750 6ba47f2b1070e90cf8f52ed486a12891 326 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_12750 6ba47f2b1070e90cf8f52ed486a12891 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 1.3E-20 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_12750 6ba47f2b1070e90cf8f52ed486a12891 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 4.4E-25 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_12750 6ba47f2b1070e90cf8f52ed486a12891 326 SMART SM00382 32 238 9.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_12750 6ba47f2b1070e90cf8f52ed486a12891 326 Gene3D G3DSA:3.40.50.300 1 325 2.5E-98 T 11-10-2018 AMS64_12750 6ba47f2b1070e90cf8f52ed486a12891 326 Pfam PF00005 ABC transporter 24 180 1.2E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_12750 6ba47f2b1070e90cf8f52ed486a12891 326 SUPERFAMILY SSF52540 33 301 4.97E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_05810 630210495875945bb2aa5f68c9d664e8 270 Gene3D G3DSA:3.40.50.300 12 270 1.1E-68 T 11-10-2018 AMS64_05810 630210495875945bb2aa5f68c9d664e8 270 Pfam PF00005 ABC transporter 28 184 1.2E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_05810 630210495875945bb2aa5f68c9d664e8 270 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_05810 630210495875945bb2aa5f68c9d664e8 270 SUPERFAMILY SSF52540 11 244 2.61E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_05810 630210495875945bb2aa5f68c9d664e8 270 SMART SM00382 37 232 8.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_18680 fb4e0e53a351396a3be0aac344f56d57 619 Pfam PF12392 Collagenase 390 504 1.8E-23 T 11-10-2018 IPR020988 Peptidase U32, collagenase AMS64_18680 fb4e0e53a351396a3be0aac344f56d57 619 Pfam PF01136 Peptidase family U32 84 311 2.6E-67 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AMS64_18680 fb4e0e53a351396a3be0aac344f56d57 619 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AMS64_10245 6dd7e57bf889df3c2770086a7fca3686 221 SUPERFAMILY SSF54862 1 192 7.64E-37 T 11-10-2018 AMS64_10245 6dd7e57bf889df3c2770086a7fca3686 221 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_10245 6dd7e57bf889df3c2770086a7fca3686 221 Pfam PF00037 4Fe-4S binding domain 76 98 5.1E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_10245 6dd7e57bf889df3c2770086a7fca3686 221 Pfam PF12837 4Fe-4S binding domain 5 24 2.1E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_00905 52679a1b6be0ff0e9e5d5f12d712c45c 81 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.313 T 11-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 AMS64_00905 52679a1b6be0ff0e9e5d5f12d712c45c 81 Pfam PF01206 Sulfurtransferase TusA 10 79 3.2E-24 T 11-10-2018 IPR001455 TusA-like domain AMS64_00905 52679a1b6be0ff0e9e5d5f12d712c45c 81 SUPERFAMILY SSF64307 8 80 1.03E-25 T 11-10-2018 IPR036868 TusA-like domain superfamily AMS64_00905 52679a1b6be0ff0e9e5d5f12d712c45c 81 Gene3D G3DSA:3.30.110.40 1 81 3.7E-30 T 11-10-2018 IPR036868 TusA-like domain superfamily AMS64_00905 52679a1b6be0ff0e9e5d5f12d712c45c 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 11-10-2018 IPR001455 TusA-like domain AMS64_12165 2c12c13e2514cd52bb5a15d9e877e12f 96 Gene3D G3DSA:3.40.91.30 2 90 3.7E-7 T 11-10-2018 IPR011578 T7 endonuclease I-like GO:0003677|GO:0004536 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 SUPERFAMILY SSF63380 105 272 1.78E-35 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 Gene3D G3DSA:2.40.30.10 126 264 1.2E-50 T 11-10-2018 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 PIRSF PIRSF000044 1 407 1.2E-218 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 2.2E-17 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 SUPERFAMILY SSF54292 40 124 2.28E-21 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.254 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 44 114 1.7E-9 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 9.7E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 9.7E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 9.7E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 9.7E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 Gene3D G3DSA:3.10.20.30 34 125 7.2E-31 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 1.3E-9 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 1.6E-224 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 SUPERFAMILY SSF52343 257 402 6.81E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_18265 77fbbd50bd1ee0c8dfb7f2344ecfc6cd 407 Gene3D G3DSA:3.40.50.80 275 393 2.2E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_07030 b945319f3839a9a9735bac10bad67f4b 561 PIRSF PIRSF002741 3 536 5.8E-68 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMS64_07030 b945319f3839a9a9735bac10bad67f4b 561 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 462 7.2E-73 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AMS64_07030 b945319f3839a9a9735bac10bad67f4b 561 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 85 107 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site AMS64_07030 b945319f3839a9a9735bac10bad67f4b 561 Gene3D G3DSA:3.10.105.10 274 520 4.9E-180 T 11-10-2018 AMS64_07030 b945319f3839a9a9735bac10bad67f4b 561 Gene3D G3DSA:3.40.190.10 47 543 4.9E-180 T 11-10-2018 AMS64_07030 b945319f3839a9a9735bac10bad67f4b 561 SUPERFAMILY SSF53850 29 533 2.53E-103 T 11-10-2018 AMS64_07030 b945319f3839a9a9735bac10bad67f4b 561 Gene3D G3DSA:3.90.76.10 67 173 4.9E-180 T 11-10-2018 AMS64_03470 73ee47daeb0fb677e6820e6d34e47792 171 Pfam PF08020 Protein of unknown function (DUF1706) 1 165 1.2E-50 T 11-10-2018 IPR012550 Protein of unknown function DUF1706 AMS64_03470 73ee47daeb0fb677e6820e6d34e47792 171 Gene3D G3DSA:1.20.120.450 1 167 2.4E-58 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMS64_03470 73ee47daeb0fb677e6820e6d34e47792 171 SUPERFAMILY SSF109854 7 146 8.36E-7 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMS64_03470 73ee47daeb0fb677e6820e6d34e47792 171 PIRSF PIRSF031551 1 170 1.4E-50 T 11-10-2018 IPR012550 Protein of unknown function DUF1706 AMS64_11365 04a3076af21dd16e90e0cb58fdb86a03 996 Gene3D G3DSA:2.130.10.10 40 379 6.1E-20 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMS64_11365 04a3076af21dd16e90e0cb58fdb86a03 996 SUPERFAMILY SSF48695 554 767 3.63E-21 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AMS64_11365 04a3076af21dd16e90e0cb58fdb86a03 996 SUPERFAMILY SSF50974 19 398 2.51E-23 T 11-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AMS64_11365 04a3076af21dd16e90e0cb58fdb86a03 996 Gene3D G3DSA:1.10.1130.10 478 806 5.5E-7 T 11-10-2018 AMS64_11195 47a55b494a1f42dc1d08725fb833503c 72 Gene3D G3DSA:2.40.50.140 1 65 3.2E-26 T 11-10-2018 AMS64_11195 47a55b494a1f42dc1d08725fb833503c 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site AMS64_11195 47a55b494a1f42dc1d08725fb833503c 72 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.0E-28 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_11195 47a55b494a1f42dc1d08725fb833503c 72 SUPERFAMILY SSF50249 1 64 7.07E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_11195 47a55b494a1f42dc1d08725fb833503c 72 PIRSF PIRSF002599 1 72 7.8E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMS64_11195 47a55b494a1f42dc1d08725fb833503c 72 SMART SM00357 3 67 2.3E-26 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMS64_11195 47a55b494a1f42dc1d08725fb833503c 72 PRINTS PR00050 Cold shock protein signature 4 19 2.1E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_11195 47a55b494a1f42dc1d08725fb833503c 72 PRINTS PR00050 Cold shock protein signature 25 34 2.1E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_11195 47a55b494a1f42dc1d08725fb833503c 72 PRINTS PR00050 Cold shock protein signature 40 58 2.1E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_11195 47a55b494a1f42dc1d08725fb833503c 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 66 2.2E-40 T 11-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 AMS64_12335 13b995b138926d261a6ae30929dc2436 214 SMART SM00448 2 115 3.4E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_12335 13b995b138926d261a6ae30929dc2436 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.1E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_12335 13b995b138926d261a6ae30929dc2436 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.1E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_12335 13b995b138926d261a6ae30929dc2436 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.1E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_12335 13b995b138926d261a6ae30929dc2436 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 2.5E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_12335 13b995b138926d261a6ae30929dc2436 214 SMART SM00421 146 203 2.4E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_12335 13b995b138926d261a6ae30929dc2436 214 SUPERFAMILY SSF46894 136 210 6.46E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_12335 13b995b138926d261a6ae30929dc2436 214 SUPERFAMILY SSF52172 2 132 5.98E-36 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_12335 13b995b138926d261a6ae30929dc2436 214 Pfam PF00072 Response regulator receiver domain 4 116 2.6E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_12335 13b995b138926d261a6ae30929dc2436 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_12335 13b995b138926d261a6ae30929dc2436 214 Gene3D G3DSA:3.40.50.12740 2 209 4.4E-62 T 11-10-2018 AMS64_22090 b1318e97b07ddc45f75d217bb5a079ec 151 Pfam PF10772 Protein of unknown function (DUF2597) 9 141 7.8E-61 T 11-10-2018 IPR019708 Bacteriophage HP1, Orf24 AMS64_15550 b1318e97b07ddc45f75d217bb5a079ec 151 Pfam PF10772 Protein of unknown function (DUF2597) 9 141 7.8E-61 T 11-10-2018 IPR019708 Bacteriophage HP1, Orf24 AMS64_12110 72f45a8d690ad826610748d3e42ba760 117 Pfam PF01844 HNH endonuclease 66 112 1.1E-16 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AMS64_12110 72f45a8d690ad826610748d3e42ba760 117 Gene3D G3DSA:3.30.40.60 32 116 5.0E-14 T 11-10-2018 AMS64_12110 72f45a8d690ad826610748d3e42ba760 117 SMART SM00507 53 107 2.4E-13 T 11-10-2018 IPR003615 HNH nuclease AMS64_21085 c46ca1cb02e9c71c5e51f5e3a5f15e0f 307 SMART SM00267 138 300 1.9E-55 T 11-10-2018 IPR000160 GGDEF domain AMS64_21085 c46ca1cb02e9c71c5e51f5e3a5f15e0f 307 SUPERFAMILY SSF55073 154 301 3.61E-39 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_21085 c46ca1cb02e9c71c5e51f5e3a5f15e0f 307 Gene3D G3DSA:3.30.70.270 136 300 2.0E-45 T 11-10-2018 AMS64_21085 c46ca1cb02e9c71c5e51f5e3a5f15e0f 307 Pfam PF00990 Diguanylate cyclase, GGDEF domain 149 295 4.4E-37 T 11-10-2018 IPR000160 GGDEF domain AMS64_21085 c46ca1cb02e9c71c5e51f5e3a5f15e0f 307 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 145 298 2.3E-35 T 11-10-2018 IPR000160 GGDEF domain AMS64_11520 5ab3c7217e391a1d67178b82c8f9cbfc 287 SUPERFAMILY SSF52096 25 284 1.03E-85 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_11520 5ab3c7217e391a1d67178b82c8f9cbfc 287 Gene3D G3DSA:3.90.226.10 25 284 2.2E-83 T 11-10-2018 AMS64_11520 5ab3c7217e391a1d67178b82c8f9cbfc 287 Pfam PF01039 Carboxyl transferase domain 99 240 1.9E-14 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMS64_11520 5ab3c7217e391a1d67178b82c8f9cbfc 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 3.6E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_11520 5ab3c7217e391a1d67178b82c8f9cbfc 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 3.6E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_11520 5ab3c7217e391a1d67178b82c8f9cbfc 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 3.6E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_11520 5ab3c7217e391a1d67178b82c8f9cbfc 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 3.6E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_11520 5ab3c7217e391a1d67178b82c8f9cbfc 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 3.6E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_11520 5ab3c7217e391a1d67178b82c8f9cbfc 287 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 36.92 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_11520 5ab3c7217e391a1d67178b82c8f9cbfc 287 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 3.2E-136 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMS64_15055 d2113ff84cf8411a2ed9863641811f70 429 Gene3D G3DSA:3.90.1150.10 11 398 3.4E-120 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_15055 d2113ff84cf8411a2ed9863641811f70 429 Gene3D G3DSA:3.40.640.10 75 304 3.4E-120 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_15055 d2113ff84cf8411a2ed9863641811f70 429 SUPERFAMILY SSF53383 28 401 9.82E-92 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_15055 d2113ff84cf8411a2ed9863641811f70 429 Pfam PF00202 Aminotransferase class-III 38 340 3.5E-50 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMS64_22615 d768c0550b8359f6756c99fd365baacd 483 Pfam PF13746 4Fe-4S dicluster domain 227 331 1.0E-41 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_22615 d768c0550b8359f6756c99fd365baacd 483 Gene3D G3DSA:2.60.40.10 363 483 9.9E-36 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_22615 d768c0550b8359f6756c99fd365baacd 483 SUPERFAMILY SSF54862 112 362 1.79E-32 T 11-10-2018 AMS64_22615 d768c0550b8359f6756c99fd365baacd 483 Pfam PF12801 4Fe-4S binding domain 101 142 1.3E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_22615 d768c0550b8359f6756c99fd365baacd 483 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 48 462 1.9E-172 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AMS64_22615 d768c0550b8359f6756c99fd365baacd 483 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 279 290 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_22615 d768c0550b8359f6756c99fd365baacd 483 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 361 481 1.8E-30 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AMS64_22615 d768c0550b8359f6756c99fd365baacd 483 Gene3D G3DSA:3.30.70.20 222 298 2.7E-5 T 11-10-2018 AMS64_10650 f2b64da7e5b2cbefb445fe2321590d20 478 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 3 476 6.9E-181 T 11-10-2018 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 AMS64_10650 f2b64da7e5b2cbefb445fe2321590d20 478 PIRSF PIRSF006060 1 469 1.1E-51 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_10650 f2b64da7e5b2cbefb445fe2321590d20 478 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 476 6.5E-174 T 11-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AMS64_10650 f2b64da7e5b2cbefb445fe2321590d20 478 Pfam PF13520 Amino acid permease 5 416 1.2E-71 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_10650 f2b64da7e5b2cbefb445fe2321590d20 478 Gene3D G3DSA:1.20.1740.10 1 451 5.0E-62 T 11-10-2018 AMS64_04420 d36d311ebe3c004b40d10c9697665c80 546 SMART SM00065 199 345 0.035 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_04420 d36d311ebe3c004b40d10c9697665c80 546 SMART SM00065 11 157 0.0036 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_04420 d36d311ebe3c004b40d10c9697665c80 546 SUPERFAMILY SSF55781 201 348 1.83E-11 T 11-10-2018 AMS64_04420 d36d311ebe3c004b40d10c9697665c80 546 SUPERFAMILY SSF55073 385 544 9.42E-43 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_04420 d36d311ebe3c004b40d10c9697665c80 546 SUPERFAMILY SSF55781 12 158 2.62E-8 T 11-10-2018 AMS64_04420 d36d311ebe3c004b40d10c9697665c80 546 Gene3D G3DSA:3.30.450.40 10 152 1.2E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_04420 d36d311ebe3c004b40d10c9697665c80 546 Gene3D G3DSA:3.30.70.270 365 543 2.3E-52 T 11-10-2018 AMS64_04420 d36d311ebe3c004b40d10c9697665c80 546 SMART SM00267 369 545 2.0E-61 T 11-10-2018 IPR000160 GGDEF domain AMS64_04420 d36d311ebe3c004b40d10c9697665c80 546 Pfam PF00990 Diguanylate cyclase, GGDEF domain 382 540 2.0E-45 T 11-10-2018 IPR000160 GGDEF domain AMS64_04420 d36d311ebe3c004b40d10c9697665c80 546 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 378 542 8.1E-44 T 11-10-2018 IPR000160 GGDEF domain AMS64_04420 d36d311ebe3c004b40d10c9697665c80 546 Gene3D G3DSA:3.30.450.40 182 346 1.2E-10 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_21800 f55a3fd467a56ed8a7f32881bab54ef0 321 Gene3D G3DSA:3.30.930.10 66 271 6.2E-69 T 11-10-2018 AMS64_21800 f55a3fd467a56ed8a7f32881bab54ef0 321 SUPERFAMILY SSF50037 272 318 7.32E-11 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal AMS64_21800 f55a3fd467a56ed8a7f32881bab54ef0 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 318 32.399 T 11-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AMS64_21800 f55a3fd467a56ed8a7f32881bab54ef0 321 Pfam PF02237 Biotin protein ligase C terminal domain 273 318 5.5E-11 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMS64_21800 f55a3fd467a56ed8a7f32881bab54ef0 321 Gene3D G3DSA:2.30.30.100 272 321 2.5E-17 T 11-10-2018 AMS64_21800 f55a3fd467a56ed8a7f32881bab54ef0 321 SUPERFAMILY SSF55681 72 269 4.64E-58 T 11-10-2018 AMS64_21800 f55a3fd467a56ed8a7f32881bab54ef0 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 7.1E-19 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMS64_21800 f55a3fd467a56ed8a7f32881bab54ef0 321 Pfam PF08279 HTH domain 8 59 3.9E-12 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 AMS64_21800 f55a3fd467a56ed8a7f32881bab54ef0 321 SUPERFAMILY SSF46785 1 61 5.52E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_21800 f55a3fd467a56ed8a7f32881bab54ef0 321 Gene3D G3DSA:1.10.10.10 3 64 1.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_21800 f55a3fd467a56ed8a7f32881bab54ef0 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 318 3.5E-64 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMS64_05245 e35671f3391a6207b5518da39b878e34 302 PIRSF PIRSF006779 22 299 3.9E-96 T 11-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase AMS64_05245 e35671f3391a6207b5518da39b878e34 302 Gene3D G3DSA:2.40.30.90 187 302 2.8E-33 T 11-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal AMS64_05245 e35671f3391a6207b5518da39b878e34 302 SUPERFAMILY SSF101852 194 297 9.81E-25 T 11-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal AMS64_05245 e35671f3391a6207b5518da39b878e34 302 SUPERFAMILY SSF102522 26 182 6.93E-55 T 11-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal AMS64_05245 e35671f3391a6207b5518da39b878e34 302 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 28 293 8.3E-73 T 11-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase AMS64_05245 e35671f3391a6207b5518da39b878e34 302 Gene3D G3DSA:3.40.50.10790 22 186 7.9E-52 T 11-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal AMS64_02775 8cd16b0d9504f59e2dd27eeda11f36b2 90 Pfam PF13466 STAS domain 1 76 3.4E-15 T 11-10-2018 IPR002645 STAS domain AMS64_02775 8cd16b0d9504f59e2dd27eeda11f36b2 90 Gene3D G3DSA:3.30.750.24 1 89 3.0E-11 T 11-10-2018 IPR036513 STAS domain superfamily AMS64_02775 8cd16b0d9504f59e2dd27eeda11f36b2 90 SUPERFAMILY SSF52091 2 89 1.57E-12 T 11-10-2018 IPR036513 STAS domain superfamily AMS64_08475 95ed865346617a3dc3e5a702686f8b78 250 SUPERFAMILY SSF53850 11 238 6.52E-44 T 11-10-2018 AMS64_08475 95ed865346617a3dc3e5a702686f8b78 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 11 238 3.1E-35 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_08475 95ed865346617a3dc3e5a702686f8b78 250 SMART SM00062 10 242 1.9E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_08475 95ed865346617a3dc3e5a702686f8b78 250 Gene3D G3DSA:3.40.190.10 17 234 1.5E-33 T 11-10-2018 AMS64_08475 95ed865346617a3dc3e5a702686f8b78 250 Gene3D G3DSA:3.40.190.10 93 199 1.5E-33 T 11-10-2018 AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 6.8E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 334 7.7E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 SMART SM00387 231 335 3.4E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 Pfam PF13188 PAS domain 17 72 1.8E-7 T 11-10-2018 IPR000014 PAS domain AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 Gene3D G3DSA:1.10.287.130 107 186 1.9E-12 T 11-10-2018 AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 332 7.7E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 313 7.7E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 294 7.7E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 280 7.7E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 SUPERFAMILY SSF55874 177 335 2.1E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 SMART SM00388 122 188 5.3E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 SUPERFAMILY SSF47384 116 188 6.47E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 SMART SM00091 16 79 7.2E-4 T 11-10-2018 IPR000014 PAS domain AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 Gene3D G3DSA:3.30.450.20 10 105 4.2E-5 T 11-10-2018 AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 SUPERFAMILY SSF55785 20 100 6.09E-9 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_15720 b65f31754008e73c0d688deee99b83e0 344 Gene3D G3DSA:3.30.565.10 190 341 5.2E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_14240 c9974e1b557e51cb839814313c3cdb9e 134 PIRSF PIRSF002096 1 134 4.7E-55 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AMS64_14240 c9974e1b557e51cb839814313c3cdb9e 134 SMART SM00528 88 134 9.1E-21 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AMS64_14240 c9974e1b557e51cb839814313c3cdb9e 134 Gene3D G3DSA:1.10.287.1050 1 82 4.4E-31 T 11-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 AMS64_14240 c9974e1b557e51cb839814313c3cdb9e 134 Gene3D G3DSA:4.10.430.10 92 134 3.7E-21 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 AMS64_14240 c9974e1b557e51cb839814313c3cdb9e 134 SUPERFAMILY SSF81273 91 134 5.89E-10 T 11-10-2018 AMS64_14240 c9974e1b557e51cb839814313c3cdb9e 134 SUPERFAMILY SSF81273 2 58 6.67E-16 T 11-10-2018 AMS64_14240 c9974e1b557e51cb839814313c3cdb9e 134 Pfam PF00816 H-NS histone family 32 128 2.6E-18 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AMS64_04090 4767d4dc6fa7f699f4d3f64ff610fbfd 242 Pfam PF01553 Acyltransferase 53 180 5.0E-31 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMS64_04090 4767d4dc6fa7f699f4d3f64ff610fbfd 242 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 2.0E-43 T 11-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 AMS64_04090 4767d4dc6fa7f699f4d3f64ff610fbfd 242 SUPERFAMILY SSF69593 3 235 5.1E-49 T 11-10-2018 AMS64_04090 4767d4dc6fa7f699f4d3f64ff610fbfd 242 SMART SM00563 67 182 9.4E-42 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMS64_19195 b18bcff5a08254fdfa2c3e197536c890 700 Pfam PF00672 HAMP domain 368 418 3.2E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_19195 b18bcff5a08254fdfa2c3e197536c890 700 Gene3D G3DSA:3.30.450.20 73 230 6.7E-38 T 11-10-2018 AMS64_19195 b18bcff5a08254fdfa2c3e197536c890 700 SMART SM00283 437 698 8.0E-70 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_19195 b18bcff5a08254fdfa2c3e197536c890 700 SMART SM00304 368 422 2.9E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_19195 b18bcff5a08254fdfa2c3e197536c890 700 SUPERFAMILY SSF58104 390 699 1.44E-74 T 11-10-2018 AMS64_19195 b18bcff5a08254fdfa2c3e197536c890 700 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 481 664 2.4E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_19195 b18bcff5a08254fdfa2c3e197536c890 700 Gene3D G3DSA:1.10.287.950 367 700 5.4E-74 T 11-10-2018 AMS64_19195 b18bcff5a08254fdfa2c3e197536c890 700 Gene3D G3DSA:3.30.450.20 67 328 6.7E-38 T 11-10-2018 AMS64_12790 731aa3c1d66f4dbde14e79e50d5270f0 83 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 2.0E-22 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AMS64_12790 731aa3c1d66f4dbde14e79e50d5270f0 83 Pfam PF09723 Zinc ribbon domain 1 41 3.4E-16 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AMS64_12790 731aa3c1d66f4dbde14e79e50d5270f0 83 SMART SM00834 1 42 1.6E-19 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AMS64_20675 07c3226d577b2112430b39ed4b4912fc 112 PIRSF PIRSF002599 13 111 5.7E-19 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMS64_20675 07c3226d577b2112430b39ed4b4912fc 112 Pfam PF06961 Protein of unknown function (DUF1294) 32 86 1.6E-24 T 11-10-2018 IPR010718 Protein of unknown function DUF1294 AMS64_10280 db71a0af84a77965ddeaded166468022 163 SUPERFAMILY SSF53163 5 140 5.23E-33 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily AMS64_10280 db71a0af84a77965ddeaded166468022 163 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 5 145 3.0E-45 T 11-10-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 AMS64_10280 db71a0af84a77965ddeaded166468022 163 PRINTS PR00446 Hydrogen uptake protein signature 57 67 1.5E-8 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_10280 db71a0af84a77965ddeaded166468022 163 PRINTS PR00446 Hydrogen uptake protein signature 34 51 1.5E-8 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_10280 db71a0af84a77965ddeaded166468022 163 PRINTS PR00446 Hydrogen uptake protein signature 16 27 1.5E-8 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_10280 db71a0af84a77965ddeaded166468022 163 PRINTS PR00446 Hydrogen uptake protein signature 4 16 1.5E-8 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_10280 db71a0af84a77965ddeaded166468022 163 PRINTS PR00446 Hydrogen uptake protein signature 68 84 1.5E-8 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_10280 db71a0af84a77965ddeaded166468022 163 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 140 2.0E-35 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_10280 db71a0af84a77965ddeaded166468022 163 Gene3D G3DSA:3.40.50.1450 2 153 6.8E-48 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily AMS64_10280 db71a0af84a77965ddeaded166468022 163 Pfam PF01750 Hydrogenase maturation protease 25 138 2.9E-18 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_01715 de6ec6535bd14facd5495cd3a6c0d6f3 280 SUPERFAMILY SSF161098 3 261 3.83E-50 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_01715 de6ec6535bd14facd5495cd3a6c0d6f3 280 Gene3D G3DSA:1.10.3720.10 10 264 5.1E-45 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_01715 de6ec6535bd14facd5495cd3a6c0d6f3 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 266 1.6E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_09090 31dca83c3c9f5ae36fc54148b2d33d1a 218 PIRSF PIRSF000495 6 218 3.3E-61 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AMS64_09090 31dca83c3c9f5ae36fc54148b2d33d1a 218 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 9 217 2.3E-61 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AMS64_09090 31dca83c3c9f5ae36fc54148b2d33d1a 218 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 7 218 33.829 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AMS64_09090 31dca83c3c9f5ae36fc54148b2d33d1a 218 Gene3D G3DSA:3.40.50.880 3 218 3.8E-65 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_09090 31dca83c3c9f5ae36fc54148b2d33d1a 218 Pfam PF00117 Glutamine amidotransferase class-I 10 216 3.4E-17 T 11-10-2018 IPR017926 Glutamine amidotransferase AMS64_09090 31dca83c3c9f5ae36fc54148b2d33d1a 218 SUPERFAMILY SSF52317 7 217 2.52E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_13095 3d8ee252c403bad1f5ad1cb47a371517 244 Gene3D G3DSA:3.30.420.10 4 191 1.1E-57 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_13095 3d8ee252c403bad1f5ad1cb47a371517 244 Pfam PF00929 Exonuclease 10 176 5.4E-39 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMS64_13095 3d8ee252c403bad1f5ad1cb47a371517 244 SMART SM00479 8 185 6.5E-54 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMS64_13095 3d8ee252c403bad1f5ad1cb47a371517 244 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 220 3.3E-80 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_13095 3d8ee252c403bad1f5ad1cb47a371517 244 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 8 244 2.5E-96 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMS64_13095 3d8ee252c403bad1f5ad1cb47a371517 244 SUPERFAMILY SSF53098 8 187 1.81E-56 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_03555 2f7ce8c1ef982513bea90e8c76527c52 287 Pfam PF01734 Patatin-like phospholipase 9 60 3.0E-6 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMS64_03555 2f7ce8c1ef982513bea90e8c76527c52 287 SUPERFAMILY SSF52151 4 230 1.86E-35 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMS64_03555 2f7ce8c1ef982513bea90e8c76527c52 287 Gene3D G3DSA:3.40.1090.10 3 106 2.3E-8 T 11-10-2018 AMS64_20570 41780427106355fd9514d3cf5b57ce81 430 SUPERFAMILY SSF63380 218 311 1.52E-18 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_20570 41780427106355fd9514d3cf5b57ce81 430 SUPERFAMILY SSF52343 299 423 1.7E-19 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_20570 41780427106355fd9514d3cf5b57ce81 430 Gene3D G3DSA:3.40.50.80 310 427 3.3E-16 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_20570 41780427106355fd9514d3cf5b57ce81 430 Pfam PF01794 Ferric reductase like transmembrane component 40 171 2.1E-12 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain AMS64_20570 41780427106355fd9514d3cf5b57ce81 430 Pfam PF08022 FAD-binding domain 225 295 6.2E-6 T 11-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 AMS64_20570 41780427106355fd9514d3cf5b57ce81 430 Gene3D G3DSA:2.40.30.10 211 308 7.0E-15 T 11-10-2018 AMS64_03830 62d87d484a8fac905ceeeeb0ad2c9a5e 688 Pfam PF13718 GNAT acetyltransferase 2 383 500 6.6E-19 T 11-10-2018 IPR000182 GNAT domain AMS64_03830 62d87d484a8fac905ceeeeb0ad2c9a5e 688 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 17 685 48.781 T 11-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 AMS64_03830 62d87d484a8fac905ceeeeb0ad2c9a5e 688 Gene3D G3DSA:3.40.50.12320 189 341 5.7E-45 T 11-10-2018 AMS64_03830 62d87d484a8fac905ceeeeb0ad2c9a5e 688 Gene3D G3DSA:3.40.630.30 346 547 5.2E-63 T 11-10-2018 AMS64_03830 62d87d484a8fac905ceeeeb0ad2c9a5e 688 Pfam PF08351 Domain of unknown function (DUF1726) 63 142 2.7E-10 T 11-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 AMS64_03830 62d87d484a8fac905ceeeeb0ad2c9a5e 688 SUPERFAMILY SSF52540 150 294 1.0E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_03830 62d87d484a8fac905ceeeeb0ad2c9a5e 688 Pfam PF05127 Helicase 191 351 2.2E-51 T 11-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 AMS64_03830 62d87d484a8fac905ceeeeb0ad2c9a5e 688 Gene3D G3DSA:3.40.50.11040 4 183 2.9E-44 T 11-10-2018 AMS64_03830 62d87d484a8fac905ceeeeb0ad2c9a5e 688 SUPERFAMILY SSF55729 371 530 1.12E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_10730 de4715d58ac45f16f2b7a022efa6796b 256 Pfam PF06167 Glucose-regulated metallo-peptidase M90 7 230 1.8E-76 T 11-10-2018 IPR010384 MtfA family AMS64_10730 de4715d58ac45f16f2b7a022efa6796b 256 Gene3D G3DSA:1.10.472.150 6 129 3.7E-34 T 11-10-2018 AMS64_10730 de4715d58ac45f16f2b7a022efa6796b 256 SUPERFAMILY SSF55486 33 233 1.54E-34 T 11-10-2018 AMS64_10730 de4715d58ac45f16f2b7a022efa6796b 256 Gene3D G3DSA:3.40.390.10 130 252 1.7E-39 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMS64_12270 77bd9753e18196e39cb74a1ecd97b9eb 445 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 17 207 1.9E-36 T 11-10-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 AMS64_12270 77bd9753e18196e39cb74a1ecd97b9eb 445 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 15 186 4.2E-34 T 11-10-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 AMS64_04780 2f11c32b857a6eb12c148633e42bfc00 106 SUPERFAMILY SSF103481 7 104 1.96E-12 T 11-10-2018 AMS64_04780 2f11c32b857a6eb12c148633e42bfc00 106 Gene3D G3DSA:1.10.3730.20 1 106 1.8E-17 T 11-10-2018 AMS64_04780 2f11c32b857a6eb12c148633e42bfc00 106 Pfam PF00893 Small Multidrug Resistance protein 4 95 3.8E-17 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AMS64_11840 4db8278cce72f4dcad8727c12f84773b 109 SUPERFAMILY SSF55159 10 105 1.7E-18 T 11-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 AMS64_11840 4db8278cce72f4dcad8727c12f84773b 109 Pfam PF01253 Translation initiation factor SUI1 34 102 8.3E-13 T 11-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AMS64_11840 4db8278cce72f4dcad8727c12f84773b 109 PIRSF PIRSF037511 1 109 1.9E-31 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AMS64_11840 4db8278cce72f4dcad8727c12f84773b 109 Gene3D G3DSA:3.30.780.10 32 109 2.3E-25 T 11-10-2018 AMS64_07830 774faa34856cdbf30e2f982d35fead8b 184 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 52 182 1.6E-48 T 11-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 AMS64_07830 774faa34856cdbf30e2f982d35fead8b 184 Pfam PF09025 YopR, type III needle-polymerisation regulator 44 183 3.0E-34 T 11-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 AMS64_07830 774faa34856cdbf30e2f982d35fead8b 184 SUPERFAMILY SSF140591 59 164 2.16E-41 T 11-10-2018 AMS64_07830 774faa34856cdbf30e2f982d35fead8b 184 Gene3D G3DSA:1.10.10.1000 55 168 2.3E-44 T 11-10-2018 AMS64_13725 774faa34856cdbf30e2f982d35fead8b 184 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 52 182 1.6E-48 T 11-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 AMS64_13725 774faa34856cdbf30e2f982d35fead8b 184 Pfam PF09025 YopR, type III needle-polymerisation regulator 44 183 3.0E-34 T 11-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 AMS64_13725 774faa34856cdbf30e2f982d35fead8b 184 SUPERFAMILY SSF140591 59 164 2.16E-41 T 11-10-2018 AMS64_13725 774faa34856cdbf30e2f982d35fead8b 184 Gene3D G3DSA:1.10.10.1000 55 168 2.3E-44 T 11-10-2018 AMS64_02175 71ae0a2a1c03abfea51d29b4b4ea561a 687 Gene3D G3DSA:3.40.50.300 212 438 2.1E-67 T 11-10-2018 AMS64_02175 71ae0a2a1c03abfea51d29b4b4ea561a 687 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 19 685 1.2E-184 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AMS64_02175 71ae0a2a1c03abfea51d29b4b4ea561a 687 Gene3D G3DSA:1.10.10.1020 12 132 8.2E-17 T 11-10-2018 AMS64_02175 71ae0a2a1c03abfea51d29b4b4ea561a 687 SUPERFAMILY SSF52540 366 685 2.48E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_02175 71ae0a2a1c03abfea51d29b4b4ea561a 687 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 27 683 48.647 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AMS64_02175 71ae0a2a1c03abfea51d29b4b4ea561a 687 SUPERFAMILY SSF52540 25 426 2.38E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_02175 71ae0a2a1c03abfea51d29b4b4ea561a 687 Pfam PF13538 UvrD-like helicase C-terminal domain 614 658 1.1E-15 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain AMS64_02175 71ae0a2a1c03abfea51d29b4b4ea561a 687 Gene3D G3DSA:3.40.50.300 559 674 1.9E-26 T 11-10-2018 AMS64_02175 71ae0a2a1c03abfea51d29b4b4ea561a 687 Gene3D G3DSA:3.40.50.300 448 558 4.1E-26 T 11-10-2018 AMS64_02175 71ae0a2a1c03abfea51d29b4b4ea561a 687 Pfam PF13604 AAA domain 236 400 1.5E-30 T 11-10-2018 AMS64_01195 0b50a71c24dc5a11c9c6550e14cdf619 258 SUPERFAMILY SSF53448 3 142 2.02E-26 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_01195 0b50a71c24dc5a11c9c6550e14cdf619 258 Pfam PF00535 Glycosyl transferase family 2 9 131 1.1E-17 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMS64_01195 0b50a71c24dc5a11c9c6550e14cdf619 258 Gene3D G3DSA:3.90.550.10 1 166 1.9E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_19160 b833179f9a716081aedcac091952e845 187 PIRSF PIRSF011443 2 171 6.8E-50 T 11-10-2018 IPR026267 Inner membrane protein YgjV AMS64_19160 b833179f9a716081aedcac091952e845 187 Pfam PF10688 Bacterial inner membrane protein 7 161 1.4E-43 T 11-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AMS64_20620 d58c4a5d34e27afafcc9314f3c91af6a 610 Gene3D G3DSA:1.10.1370.10 376 534 2.7E-20 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMS64_20620 d58c4a5d34e27afafcc9314f3c91af6a 610 Gene3D G3DSA:3.40.390.10 276 375 2.7E-20 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMS64_20620 d58c4a5d34e27afafcc9314f3c91af6a 610 Gene3D G3DSA:1.10.1370.10 103 229 9.8E-7 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMS64_20620 d58c4a5d34e27afafcc9314f3c91af6a 610 Pfam PF01432 Peptidase family M3 138 542 4.1E-21 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AMS64_20620 d58c4a5d34e27afafcc9314f3c91af6a 610 SUPERFAMILY SSF55486 6 544 3.91E-67 T 11-10-2018 AMS64_20965 023222c37eb20e53474ae8195f28e27a 195 SUPERFAMILY SSF50249 4 195 9.94E-58 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_20965 023222c37eb20e53474ae8195f28e27a 195 Pfam PF00436 Single-strand binding protein family 6 107 6.8E-43 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AMS64_20965 023222c37eb20e53474ae8195f28e27a 195 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 195 1.2E-62 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMS64_20965 023222c37eb20e53474ae8195f28e27a 195 Gene3D G3DSA:2.40.50.140 2 146 1.8E-50 T 11-10-2018 AMS64_20965 023222c37eb20e53474ae8195f28e27a 195 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 38.828 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMS64_21150 bfe2b86e2c84b847fa76a28a04e1b5ef 264 Gene3D G3DSA:3.40.50.720 8 257 1.1E-89 T 11-10-2018 AMS64_21150 bfe2b86e2c84b847fa76a28a04e1b5ef 264 Pfam PF00899 ThiF family 16 251 4.5E-62 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMS64_21150 bfe2b86e2c84b847fa76a28a04e1b5ef 264 SUPERFAMILY SSF69572 6 253 2.09E-86 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AMS64_02490 1f95636778c49cd2c1f6aaa8b73670f4 359 Pfam PF05125 Phage major capsid protein, P2 family 13 334 6.4E-105 T 11-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid AMS64_02490 1f95636778c49cd2c1f6aaa8b73670f4 359 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 15 329 1.5E-103 T 11-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid AMS64_17605 14a33ea7932456153b1e4f1274ebe609 118 Gene3D G3DSA:2.40.128.200 30 118 1.0E-22 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily AMS64_17605 14a33ea7932456153b1e4f1274ebe609 118 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 36 107 3.6E-21 T 11-10-2018 IPR018660 C-type lysozyme inhibitor AMS64_17605 14a33ea7932456153b1e4f1274ebe609 118 SUPERFAMILY SSF141488 32 116 2.09E-19 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily AMS64_18290 677ca8fdef37d365aa153f16b7cb723f 73 Pfam PF09493 Tryptophan-rich protein (DUF2389) 13 72 6.6E-17 T 11-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich AMS64_17555 4577397041931452ba3b9eb3fff16414 261 Pfam PF12833 Helix-turn-helix domain 180 256 5.2E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_17555 4577397041931452ba3b9eb3fff16414 261 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 252 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMS64_17555 4577397041931452ba3b9eb3fff16414 261 Gene3D G3DSA:1.10.10.60 154 260 6.9E-22 T 11-10-2018 AMS64_17555 4577397041931452ba3b9eb3fff16414 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 3.8E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_17555 4577397041931452ba3b9eb3fff16414 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 3.8E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_17555 4577397041931452ba3b9eb3fff16414 261 SMART SM00342 174 256 1.0E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_17555 4577397041931452ba3b9eb3fff16414 261 Gene3D G3DSA:2.60.120.10 4 97 2.6E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_17555 4577397041931452ba3b9eb3fff16414 261 SUPERFAMILY SSF46689 210 257 3.32E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_17555 4577397041931452ba3b9eb3fff16414 261 SUPERFAMILY SSF51182 13 183 2.13E-11 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_06190 a71d3e0d29444b801c7a0e5ab4df18c6 332 Pfam PF13406 Transglycosylase SLT domain 27 308 7.7E-95 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 AMS64_06190 a71d3e0d29444b801c7a0e5ab4df18c6 332 Gene3D G3DSA:1.10.8.350 28 192 1.1E-108 T 11-10-2018 AMS64_06190 a71d3e0d29444b801c7a0e5ab4df18c6 332 Gene3D G3DSA:1.10.530.10 59 307 1.1E-108 T 11-10-2018 AMS64_06190 a71d3e0d29444b801c7a0e5ab4df18c6 332 SUPERFAMILY SSF53955 26 312 5.44E-80 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_06190 a71d3e0d29444b801c7a0e5ab4df18c6 332 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 27 310 7.9E-111 T 11-10-2018 IPR011757 Lytic transglycosylase MltB AMS64_01905 35f9a59ab9c5f2566c5d92a19d36264e 242 SUPERFAMILY SSF53271 68 241 4.83E-32 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMS64_01905 35f9a59ab9c5f2566c5d92a19d36264e 242 Gene3D G3DSA:3.40.50.2020 80 242 4.2E-16 T 11-10-2018 AMS64_05105 812e77761e8577727f56223d66418da2 105 Pfam PF04977 Septum formation initiator 11 89 2.1E-23 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC AMS64_05105 812e77761e8577727f56223d66418da2 105 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 33.815 T 11-10-2018 IPR023081 Cell division protein FtsB AMS64_11650 66a1defcba438c74e9618873a2c48de5 127 Gene3D G3DSA:3.90.1010.10 1 127 6.8E-59 T 11-10-2018 AMS64_11650 66a1defcba438c74e9618873a2c48de5 127 Pfam PF01592 NifU-like N terminal domain 2 125 2.0E-56 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AMS64_11650 66a1defcba438c74e9618873a2c48de5 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.4E-68 T 11-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AMS64_11650 66a1defcba438c74e9618873a2c48de5 127 SUPERFAMILY SSF82649 1 125 3.66E-49 T 11-10-2018 AMS64_17175 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AMS64_17175 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 Gene3D G3DSA:3.30.1340.10 1 85 4.0E-33 T 11-10-2018 IPR035895 HPr-like superfamily AMS64_17175 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMS64_17175 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.3E-19 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_17175 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.3E-19 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_17175 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.3E-19 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_17175 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.0E-28 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_17175 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.0E-28 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_17175 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 SUPERFAMILY SSF55594 1 82 9.03E-27 T 11-10-2018 IPR035895 HPr-like superfamily AMS64_05135 abeab6efd4ab8b5fd610e3f7e92685f2 193 Pfam PF09335 SNARE associated Golgi protein 38 158 2.9E-13 T 11-10-2018 IPR032816 SNARE associated Golgi protein AMS64_00630 6f974b0442838af7b8e88d9a8b40b8f0 220 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 144 218 2.8E-20 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AMS64_00630 6f974b0442838af7b8e88d9a8b40b8f0 220 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 143 217 1.4E-18 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMS64_00630 6f974b0442838af7b8e88d9a8b40b8f0 220 Gene3D G3DSA:3.30.2420.10 135 220 1.2E-24 T 11-10-2018 AMS64_00630 6f974b0442838af7b8e88d9a8b40b8f0 220 SUPERFAMILY SSF74653 136 202 1.7E-21 T 11-10-2018 AMS64_00630 6f974b0442838af7b8e88d9a8b40b8f0 220 PRINTS PR01374 Gram-negative bacterial tonB protein signature 62 72 2.7E-16 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMS64_00630 6f974b0442838af7b8e88d9a8b40b8f0 220 PRINTS PR01374 Gram-negative bacterial tonB protein signature 178 195 2.7E-16 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMS64_00630 6f974b0442838af7b8e88d9a8b40b8f0 220 PRINTS PR01374 Gram-negative bacterial tonB protein signature 159 177 2.7E-16 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMS64_00630 6f974b0442838af7b8e88d9a8b40b8f0 220 PRINTS PR01374 Gram-negative bacterial tonB protein signature 138 159 2.7E-16 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMS64_19495 b7ba3e4740c8636036849bb2abb8d5d4 454 Pfam PF13286 Phosphohydrolase-associated domain 419 449 8.6E-5 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain AMS64_19495 b7ba3e4740c8636036849bb2abb8d5d4 454 Gene3D G3DSA:1.10.3210.10 24 230 4.7E-71 T 11-10-2018 AMS64_19495 b7ba3e4740c8636036849bb2abb8d5d4 454 Gene3D G3DSA:1.10.3410.10 231 341 4.7E-71 T 11-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 AMS64_19495 b7ba3e4740c8636036849bb2abb8d5d4 454 Pfam PF01966 HD domain 57 115 4.8E-9 T 11-10-2018 IPR006674 HD domain AMS64_19495 b7ba3e4740c8636036849bb2abb8d5d4 454 SMART SM00471 53 247 3.5E-8 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_19495 b7ba3e4740c8636036849bb2abb8d5d4 454 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 451 9.1E-91 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AMS64_19495 b7ba3e4740c8636036849bb2abb8d5d4 454 Gene3D G3DSA:1.10.3550.10 105 443 4.7E-71 T 11-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal AMS64_19495 b7ba3e4740c8636036849bb2abb8d5d4 454 SUPERFAMILY SSF109604 24 449 6.52E-51 T 11-10-2018 AMS64_21315 69e0c992146cd95baeba8d1408796796 482 Gene3D G3DSA:3.30.2290.10 7 241 2.8E-17 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AMS64_21315 69e0c992146cd95baeba8d1408796796 482 Pfam PF01523 Putative modulator of DNA gyrase 38 333 3.7E-69 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AMS64_21315 69e0c992146cd95baeba8d1408796796 482 SUPERFAMILY SSF111283 21 481 3.27E-133 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AMS64_21315 69e0c992146cd95baeba8d1408796796 482 PIRSF PIRSF004919 15 482 2.4E-142 T 11-10-2018 IPR025502 TldD AMS64_10685 235b415473d20c3beb03d824799dda60 544 Gene3D G3DSA:3.90.226.10 1 269 2.6E-98 T 11-10-2018 AMS64_10685 235b415473d20c3beb03d824799dda60 544 SUPERFAMILY SSF52096 24 269 8.82E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_10685 235b415473d20c3beb03d824799dda60 544 Gene3D G3DSA:3.90.226.10 283 544 1.6E-101 T 11-10-2018 AMS64_10685 235b415473d20c3beb03d824799dda60 544 SUPERFAMILY SSF52096 237 526 5.57E-82 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_10685 235b415473d20c3beb03d824799dda60 544 Pfam PF01039 Carboxyl transferase domain 48 529 1.8E-146 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMS64_19860 da93f1824e7afc65260a3cd5e2331508 151 SMART SM00422 2 71 1.9E-32 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_19860 da93f1824e7afc65260a3cd5e2331508 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.7E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_19860 da93f1824e7afc65260a3cd5e2331508 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.7E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_19860 da93f1824e7afc65260a3cd5e2331508 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.7E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_19860 da93f1824e7afc65260a3cd5e2331508 151 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 3.7E-57 T 11-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 AMS64_19860 da93f1824e7afc65260a3cd5e2331508 151 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_19860 da93f1824e7afc65260a3cd5e2331508 151 Gene3D G3DSA:1.10.1660.10 1 129 7.7E-38 T 11-10-2018 AMS64_19860 da93f1824e7afc65260a3cd5e2331508 151 Pfam PF13411 MerR HTH family regulatory protein 2 69 2.3E-20 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_19860 da93f1824e7afc65260a3cd5e2331508 151 SUPERFAMILY SSF46955 2 118 1.32E-34 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMS64_12595 9740ffdce37af47e4c4bdc86ff168bfc 917 Pfam PF12838 4Fe-4S dicluster domain 377 429 7.6E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_12595 9740ffdce37af47e4c4bdc86ff168bfc 917 SUPERFAMILY SSF46548 335 445 7.5E-19 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_12595 9740ffdce37af47e4c4bdc86ff168bfc 917 Gene3D G3DSA:3.40.50.11540 145 284 6.2E-8 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_12595 9740ffdce37af47e4c4bdc86ff168bfc 917 Gene3D G3DSA:1.10.1060.10 370 444 6.6E-11 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_12595 9740ffdce37af47e4c4bdc86ff168bfc 917 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 6.7E-43 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_12595 9740ffdce37af47e4c4bdc86ff168bfc 917 SUPERFAMILY SSF142019 97 302 4.05E-53 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_12595 9740ffdce37af47e4c4bdc86ff168bfc 917 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_12595 9740ffdce37af47e4c4bdc86ff168bfc 917 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 446 7.0E-177 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AMS64_12595 9740ffdce37af47e4c4bdc86ff168bfc 917 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 7.2E-31 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain AMS64_12595 9740ffdce37af47e4c4bdc86ff168bfc 917 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 750 249.922 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AMS64_12595 9740ffdce37af47e4c4bdc86ff168bfc 917 Pfam PF10531 SLBB domain 296 344 9.9E-9 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 Gene3D G3DSA:3.50.50.60 115 455 3.3E-182 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 SUPERFAMILY SSF51905 142 335 1.62E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 Gene3D G3DSA:3.50.50.60 3 356 3.3E-182 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 Pfam PF00581 Rhodanese-like domain 478 558 4.9E-10 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 SUPERFAMILY SSF51905 2 198 2.88E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 SUPERFAMILY SSF55424 340 460 2.58E-29 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 SUPERFAMILY SSF52821 471 559 1.09E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 6.9E-15 T 11-10-2018 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 6.9E-15 T 11-10-2018 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 252 266 6.9E-15 T 11-10-2018 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 293 300 6.9E-15 T 11-10-2018 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 Gene3D G3DSA:3.40.250.10 467 559 1.1E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 319 2.2E-55 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.6E-23 T 11-10-2018 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 300 3.6E-23 T 11-10-2018 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.6E-23 T 11-10-2018 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 3.6E-23 T 11-10-2018 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 267 3.6E-23 T 11-10-2018 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 445 9.6E-11 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMS64_15145 da5f45f850599f300e7c505ca01cb8e5 562 SMART SM00450 459 562 2.0E-16 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_18085 580829a4a1d93b9e1f67708b95142553 257 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_18085 580829a4a1d93b9e1f67708b95142553 257 SUPERFAMILY SSF55120 11 252 2.72E-60 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_18085 580829a4a1d93b9e1f67708b95142553 257 Gene3D G3DSA:3.30.2350.10 4 238 1.1E-59 T 11-10-2018 AMS64_18085 580829a4a1d93b9e1f67708b95142553 257 Pfam PF00849 RNA pseudouridylate synthase 23 183 4.6E-34 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_12545 c43b1f2158452a5656a1b70e3f016f60 420 Pfam PF07690 Major Facilitator Superfamily 33 351 5.6E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_12545 c43b1f2158452a5656a1b70e3f016f60 420 SUPERFAMILY SSF103473 12 392 4.19E-37 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_12545 c43b1f2158452a5656a1b70e3f016f60 420 Gene3D G3DSA:1.20.1250.20 204 387 7.6E-16 T 11-10-2018 AMS64_12545 c43b1f2158452a5656a1b70e3f016f60 420 Gene3D G3DSA:1.20.1250.20 12 203 2.7E-6 T 11-10-2018 AMS64_15090 b6b835faad7ff8e479986f5019a0c9f4 141 SUPERFAMILY SSF160214 34 140 1.7E-19 T 11-10-2018 IPR035924 FlaG-like superfamily AMS64_15090 b6b835faad7ff8e479986f5019a0c9f4 141 Pfam PF03646 FlaG protein 37 138 1.2E-21 T 11-10-2018 IPR005186 FlaG protein AMS64_15090 b6b835faad7ff8e479986f5019a0c9f4 141 Gene3D G3DSA:3.30.160.170 31 124 4.1E-13 T 11-10-2018 IPR035924 FlaG-like superfamily AMS64_09785 8de12a936beb5088cb51c99acb7171df 213 Gene3D G3DSA:3.40.50.300 2 208 2.9E-59 T 11-10-2018 AMS64_09785 8de12a936beb5088cb51c99acb7171df 213 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AMS64_09785 8de12a936beb5088cb51c99acb7171df 213 SUPERFAMILY SSF52540 1 206 9.74E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09785 8de12a936beb5088cb51c99acb7171df 213 Pfam PF02223 Thymidylate kinase 7 196 1.0E-54 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMS64_09785 8de12a936beb5088cb51c99acb7171df 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 196 2.2E-60 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AMS64_09785 8de12a936beb5088cb51c99acb7171df 213 Hamap MF_00165 Thymidylate kinase [tmk]. 3 204 27.727 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AMS64_20760 f9131e61504c98280890c8a7ac7d0a88 486 Hamap MF_00484 Glycogen synthase [glgA]. 6 482 40.243 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AMS64_20760 f9131e61504c98280890c8a7ac7d0a88 486 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 481 3.7E-159 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AMS64_20760 f9131e61504c98280890c8a7ac7d0a88 486 Pfam PF00534 Glycosyl transferases group 1 298 443 5.7E-16 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMS64_20760 f9131e61504c98280890c8a7ac7d0a88 486 SUPERFAMILY SSF53756 5 484 1.0E-119 T 11-10-2018 AMS64_20760 f9131e61504c98280890c8a7ac7d0a88 486 Gene3D G3DSA:3.40.50.2000 258 466 3.4E-166 T 11-10-2018 AMS64_20760 f9131e61504c98280890c8a7ac7d0a88 486 Pfam PF08323 Starch synthase catalytic domain 7 244 1.9E-76 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AMS64_20760 f9131e61504c98280890c8a7ac7d0a88 486 Gene3D G3DSA:3.40.50.2000 8 480 3.4E-166 T 11-10-2018 AMS64_08740 4ba1714f320b8534810d7c6f7587708d 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 3.0E-7 T 11-10-2018 IPR009624 Uncharacterised protein family UPF0253 AMS64_08740 4ba1714f320b8534810d7c6f7587708d 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 28.574 T 11-10-2018 IPR009624 Uncharacterised protein family UPF0253 AMS64_08740 4ba1714f320b8534810d7c6f7587708d 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.5E-32 T 11-10-2018 IPR009624 Uncharacterised protein family UPF0253 AMS64_08815 bd8157d265ebb23e09c620f2312211a6 263 SUPERFAMILY SSF53955 82 260 2.45E-58 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_08815 bd8157d265ebb23e09c620f2312211a6 263 Pfam PF00912 Transglycosylase 81 248 9.2E-50 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_08815 bd8157d265ebb23e09c620f2312211a6 263 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 44 251 5.1E-81 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_08815 bd8157d265ebb23e09c620f2312211a6 263 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 36 254 40.268 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_08815 bd8157d265ebb23e09c620f2312211a6 263 Gene3D G3DSA:1.10.3810.10 77 263 4.3E-52 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_11110 49debb522caed506d80d3bc71254a337 252 Gene3D G3DSA:1.20.1260.10 2 70 1.6E-15 T 11-10-2018 IPR012347 Ferritin-like AMS64_11110 49debb522caed506d80d3bc71254a337 252 Gene3D G3DSA:1.20.1260.10 95 251 1.3E-56 T 11-10-2018 IPR012347 Ferritin-like AMS64_11110 49debb522caed506d80d3bc71254a337 252 SUPERFAMILY SSF47240 5 247 3.36E-73 T 11-10-2018 IPR009078 Ferritin-like superfamily AMS64_11110 49debb522caed506d80d3bc71254a337 252 PIRSF PIRSF020736 1 248 4.6E-88 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AMS64_11110 49debb522caed506d80d3bc71254a337 252 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 4 243 1.8E-93 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AMS64_18135 70534e0e9a6b1df9bcd6fa87de00561b 538 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 379 536 5.3E-47 T 11-10-2018 IPR000160 GGDEF domain AMS64_18135 70534e0e9a6b1df9bcd6fa87de00561b 538 SMART SM00267 368 538 6.6E-59 T 11-10-2018 IPR000160 GGDEF domain AMS64_18135 70534e0e9a6b1df9bcd6fa87de00561b 538 Gene3D G3DSA:3.30.70.270 374 538 4.2E-56 T 11-10-2018 AMS64_18135 70534e0e9a6b1df9bcd6fa87de00561b 538 SUPERFAMILY SSF55073 383 536 1.96E-49 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_18135 70534e0e9a6b1df9bcd6fa87de00561b 538 Pfam PF00990 Diguanylate cyclase, GGDEF domain 380 534 4.0E-46 T 11-10-2018 IPR000160 GGDEF domain AMS64_06240 c78b178ff1a6252e1bc00e270d0e37cf 446 SUPERFAMILY SSF111283 3 446 4.05E-85 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AMS64_06240 c78b178ff1a6252e1bc00e270d0e37cf 446 Pfam PF01523 Putative modulator of DNA gyrase 23 311 8.3E-37 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AMS64_06240 c78b178ff1a6252e1bc00e270d0e37cf 446 Gene3D G3DSA:3.30.2290.10 4 211 2.5E-30 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AMS64_13010 2659fecb673ce1642347ccff82338169 268 SUPERFAMILY SSF56219 1 267 1.22E-80 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMS64_13010 2659fecb673ce1642347ccff82338169 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AMS64_13010 2659fecb673ce1642347ccff82338169 268 Gene3D G3DSA:3.60.10.10 1 267 2.1E-76 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMS64_13010 2659fecb673ce1642347ccff82338169 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 7.6E-87 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMS64_13010 2659fecb673ce1642347ccff82338169 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 5.8E-99 T 11-10-2018 AMS64_13010 2659fecb673ce1642347ccff82338169 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 4.1E-20 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMS64_14315 26b936b4ee78b3314cc56f60c8abe5cc 291 Gene3D G3DSA:1.10.10.10 1 88 1.6E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_14315 26b936b4ee78b3314cc56f60c8abe5cc 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.4E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_14315 26b936b4ee78b3314cc56f60c8abe5cc 291 SUPERFAMILY SSF53850 90 287 9.91E-43 T 11-10-2018 AMS64_14315 26b936b4ee78b3314cc56f60c8abe5cc 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.5E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_14315 26b936b4ee78b3314cc56f60c8abe5cc 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.5E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_14315 26b936b4ee78b3314cc56f60c8abe5cc 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.5E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_14315 26b936b4ee78b3314cc56f60c8abe5cc 291 Pfam PF03466 LysR substrate binding domain 87 287 5.7E-44 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_14315 26b936b4ee78b3314cc56f60c8abe5cc 291 Gene3D G3DSA:3.40.190.290 90 289 3.1E-46 T 11-10-2018 AMS64_14315 26b936b4ee78b3314cc56f60c8abe5cc 291 SUPERFAMILY SSF46785 1 110 1.58E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_13275 31a25e92a705fea0d1b68f89deea2f4c 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 502 3.6E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_13275 31a25e92a705fea0d1b68f89deea2f4c 541 Pfam PF00672 HAMP domain 207 253 1.9E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13275 31a25e92a705fea0d1b68f89deea2f4c 541 SMART SM00304 206 259 9.3E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13275 31a25e92a705fea0d1b68f89deea2f4c 541 SUPERFAMILY SSF58104 227 536 2.88E-76 T 11-10-2018 AMS64_13275 31a25e92a705fea0d1b68f89deea2f4c 541 Gene3D G3DSA:1.10.287.950 206 537 5.0E-75 T 11-10-2018 AMS64_13275 31a25e92a705fea0d1b68f89deea2f4c 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 3.2E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_13275 31a25e92a705fea0d1b68f89deea2f4c 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 3.2E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_13275 31a25e92a705fea0d1b68f89deea2f4c 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 3.2E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_13275 31a25e92a705fea0d1b68f89deea2f4c 541 SMART SM00283 274 535 2.0E-73 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_20730 53a2a86164f60c905d8b2359830f3626 421 Pfam PF01384 Phosphate transporter family 26 409 1.8E-113 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AMS64_13925 c5923d7173f83bd08c7055f4d482e804 345 Gene3D G3DSA:1.10.3470.10 17 344 4.8E-84 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_13925 c5923d7173f83bd08c7055f4d482e804 345 SUPERFAMILY SSF81345 18 342 7.98E-75 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_13925 c5923d7173f83bd08c7055f4d482e804 345 Pfam PF01032 FecCD transport family 40 342 1.1E-81 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMS64_22455 8ab44d2e5c73a84e264cae368e28c860 300 SUPERFAMILY SSF103481 191 288 2.22E-7 T 11-10-2018 AMS64_22455 8ab44d2e5c73a84e264cae368e28c860 300 SUPERFAMILY SSF103481 42 143 2.35E-13 T 11-10-2018 AMS64_22455 8ab44d2e5c73a84e264cae368e28c860 300 TIGRFAM TIGR00688 rarD: protein RarD 8 261 5.9E-88 T 11-10-2018 IPR004626 RarD protein GO:0005887 AMS64_22455 8ab44d2e5c73a84e264cae368e28c860 300 Pfam PF00892 EamA-like transporter family 9 142 1.9E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_04480 3124dd35c8444ec3ff46821c5a1af8f7 135 PIRSF PIRSF003230 1 135 4.7E-46 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMS64_04480 3124dd35c8444ec3ff46821c5a1af8f7 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 124 8.3E-37 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMS64_04480 3124dd35c8444ec3ff46821c5a1af8f7 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 5 127 2.6E-47 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AMS64_04480 3124dd35c8444ec3ff46821c5a1af8f7 135 Pfam PF03061 Thioesterase superfamily 19 103 9.4E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMS64_04480 3124dd35c8444ec3ff46821c5a1af8f7 135 Gene3D G3DSA:3.10.129.10 1 134 2.0E-42 T 11-10-2018 AMS64_04480 3124dd35c8444ec3ff46821c5a1af8f7 135 SUPERFAMILY SSF54637 1 130 8.24E-40 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_19350 80c4d71c98c788b647efce1fbf3a1280 166 Pfam PF13239 2TM domain 85 162 1.4E-27 T 11-10-2018 IPR025698 2TM domain AMS64_19350 80c4d71c98c788b647efce1fbf3a1280 166 SUPERFAMILY SSF47413 3 59 1.07E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_19350 80c4d71c98c788b647efce1fbf3a1280 166 Pfam PF01381 Helix-turn-helix 3 54 4.6E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_19350 80c4d71c98c788b647efce1fbf3a1280 166 Gene3D G3DSA:1.10.260.40 1 83 2.9E-15 T 11-10-2018 AMS64_19350 80c4d71c98c788b647efce1fbf3a1280 166 SMART SM00530 2 56 5.7E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_07535 8ffa5f388a58900790b1c8e3f3504747 652 Gene3D G3DSA:2.60.40.10 388 511 3.5E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_07535 8ffa5f388a58900790b1c8e3f3504747 652 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 174 365 3.0E-31 T 11-10-2018 AMS64_07535 8ffa5f388a58900790b1c8e3f3504747 652 SUPERFAMILY SSF55486 174 380 6.83E-24 T 11-10-2018 AMS64_07535 8ffa5f388a58900790b1c8e3f3504747 652 Gene3D G3DSA:3.40.390.10 170 383 1.2E-16 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMS64_17210 851da4eeb9a0450c2e0a590dbbaec78a 231 Pfam PF16537 Type II secretion system protein B 166 225 9.1E-20 T 11-10-2018 IPR032389 Type II secretion system protein B AMS64_09995 f074a03b215a30f656abd5ea2dc2f48a 506 Pfam PF04293 SpoVR like protein 16 446 1.1E-174 T 11-10-2018 IPR007390 Sporulation stage V, protein R AMS64_17165 77ad0045ed00e1f228bf49ec41436efd 169 Gene3D G3DSA:2.70.70.10 9 169 7.2E-63 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_17165 77ad0045ed00e1f228bf49ec41436efd 169 SUPERFAMILY SSF51261 18 167 2.27E-55 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_17165 77ad0045ed00e1f228bf49ec41436efd 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 1.7E-50 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AMS64_17165 77ad0045ed00e1f228bf49ec41436efd 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 9.4E-50 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AMS64_17165 77ad0045ed00e1f228bf49ec41436efd 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 Pfam PF01117 Aerolysin toxin 121 452 2.2E-136 T 11-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 Gene3D G3DSA:3.10.40.10 25 114 1.2E-40 T 11-10-2018 IPR037015 Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 SMART SM00999 120 474 1.5E-218 T 11-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 Pfam PF03440 Aerolysin/Pertussis toxin (APT) domain 25 105 9.3E-28 T 11-10-2018 IPR005138 Aerolysin/Pertussis toxin domain AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 SUPERFAMILY SSF56973 109 488 3.66E-130 T 11-10-2018 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 Gene3D G3DSA:3.30.412.10 121 420 6.8E-155 T 11-10-2018 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 PRINTS PR00754 Aerolysin signature 141 163 1.1E-109 T 11-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 PRINTS PR00754 Aerolysin signature 337 360 1.1E-109 T 11-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 PRINTS PR00754 Aerolysin signature 404 422 1.1E-109 T 11-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 PRINTS PR00754 Aerolysin signature 66 85 1.1E-109 T 11-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 PRINTS PR00754 Aerolysin signature 265 289 1.1E-109 T 11-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 PRINTS PR00754 Aerolysin signature 423 442 1.1E-109 T 11-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 PRINTS PR00754 Aerolysin signature 86 106 1.1E-109 T 11-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 PRINTS PR00754 Aerolysin signature 47 65 1.1E-109 T 11-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 PRINTS PR00754 Aerolysin signature 382 401 1.1E-109 T 11-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 SUPERFAMILY SSF56436 26 107 1.13E-33 T 11-10-2018 IPR016187 C-type lectin fold AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 ProSitePatterns PS00274 Aerolysin type toxins signature. 246 255 - T 11-10-2018 IPR005831 Aerolysin/haemolysin toxin, conserved site GO:0005576 AMS64_21170 4bfc3c23ad49ae5d4c394f2decb11298 488 Gene3D G3DSA:2.170.15.10 201 443 6.8E-155 T 11-10-2018 AMS64_05700 7754b78f7410317a77a037efc714c710 74 SUPERFAMILY SSF118001 1 70 1.18E-26 T 11-10-2018 IPR036685 YehU-like superfamily AMS64_05700 7754b78f7410317a77a037efc714c710 74 PIRSF PIRSF006169 1 74 4.0E-32 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AMS64_05700 7754b78f7410317a77a037efc714c710 74 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 1.4E-31 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AMS64_05700 7754b78f7410317a77a037efc714c710 74 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 22.467 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AMS64_05700 7754b78f7410317a77a037efc714c710 74 Gene3D G3DSA:1.10.10.610 1 73 2.7E-27 T 11-10-2018 IPR036685 YehU-like superfamily AMS64_05700 7754b78f7410317a77a037efc714c710 74 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 5.0E-18 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AMS64_15365 de3fbbf580daeffbb8e52c520fc14425 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 311 1.1E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_15365 de3fbbf580daeffbb8e52c520fc14425 319 SUPERFAMILY SSF161098 117 308 5.49E-48 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_15365 de3fbbf580daeffbb8e52c520fc14425 319 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 117 210 2.0E-25 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMS64_15365 de3fbbf580daeffbb8e52c520fc14425 319 Gene3D G3DSA:1.10.3720.10 111 318 1.0E-54 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_18045 c8eb0db69d410aeeb01da690ae3fc7b7 262 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 249 1.6E-96 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMS64_18045 c8eb0db69d410aeeb01da690ae3fc7b7 262 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 41.757 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMS64_18045 c8eb0db69d410aeeb01da690ae3fc7b7 262 Pfam PF00557 Metallopeptidase family M24 12 241 2.0E-54 T 11-10-2018 IPR000994 Peptidase M24 AMS64_18045 c8eb0db69d410aeeb01da690ae3fc7b7 262 Gene3D G3DSA:3.90.230.10 1 259 1.6E-110 T 11-10-2018 AMS64_18045 c8eb0db69d410aeeb01da690ae3fc7b7 262 SUPERFAMILY SSF55920 3 252 3.01E-89 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AMS64_18045 c8eb0db69d410aeeb01da690ae3fc7b7 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 4.9E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMS64_18045 c8eb0db69d410aeeb01da690ae3fc7b7 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 4.9E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMS64_18045 c8eb0db69d410aeeb01da690ae3fc7b7 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 4.9E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMS64_18045 c8eb0db69d410aeeb01da690ae3fc7b7 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 4.9E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMS64_18045 c8eb0db69d410aeeb01da690ae3fc7b7 262 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMS64_09225 e8ec304e12c5492330e89a1c16cd4fb5 588 SUPERFAMILY SSF51182 236 578 1.65E-69 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_09225 e8ec304e12c5492330e89a1c16cd4fb5 588 PIRSF PIRSF026713 7 588 6.1E-194 T 11-10-2018 IPR016847 Mannose-6-phosphate isomerase, Firmicutes, long form, predicted AMS64_09225 e8ec304e12c5492330e89a1c16cd4fb5 588 Gene3D G3DSA:2.60.120.10 233 476 2.3E-68 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_15305 dc8781594e3cf1e427db85b36d095bd7 298 Gene3D G3DSA:3.40.800.20 3 291 3.2E-60 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMS64_15305 dc8781594e3cf1e427db85b36d095bd7 298 SUPERFAMILY SSF52768 2 279 7.67E-75 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AMS64_15305 dc8781594e3cf1e427db85b36d095bd7 298 Pfam PF00850 Histone deacetylase domain 42 277 6.5E-46 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMS64_15305 dc8781594e3cf1e427db85b36d095bd7 298 PRINTS PR01270 Histone deacetylase superfamily signature 148 163 5.6E-16 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMS64_15305 dc8781594e3cf1e427db85b36d095bd7 298 PRINTS PR01270 Histone deacetylase superfamily signature 222 232 5.6E-16 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMS64_15305 dc8781594e3cf1e427db85b36d095bd7 298 PRINTS PR01270 Histone deacetylase superfamily signature 114 137 5.6E-16 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMS64_06865 6fc9412450363ff7a8eaddbd1604d2e1 183 Gene3D G3DSA:1.20.120.520 1 155 4.8E-18 T 11-10-2018 AMS64_06865 6fc9412450363ff7a8eaddbd1604d2e1 183 Pfam PF01814 Hemerythrin HHE cation binding domain 4 135 1.0E-9 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AMS64_10555 2d3695f0fe22de12f7159629caca0bfa 138 Gene3D G3DSA:3.40.50.300 4 117 9.3E-12 T 11-10-2018 AMS64_10555 2d3695f0fe22de12f7159629caca0bfa 138 SUPERFAMILY SSF52540 22 109 1.31E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11390 c3ba4ff1647f9a0edf59f98b361ee6f5 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 18 397 5.3E-107 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AMS64_11390 c3ba4ff1647f9a0edf59f98b361ee6f5 403 SUPERFAMILY SSF103473 14 398 1.83E-61 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_11390 c3ba4ff1647f9a0edf59f98b361ee6f5 403 Pfam PF07690 Major Facilitator Superfamily 25 365 4.1E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_11390 c3ba4ff1647f9a0edf59f98b361ee6f5 403 Gene3D G3DSA:1.20.1720.10 17 396 2.8E-107 T 11-10-2018 AMS64_16550 d700ebbd9ef2a11c1b91073050599553 575 Pfam PF04932 O-Antigen ligase 198 341 9.1E-12 T 11-10-2018 IPR007016 O-antigen ligase-related AMS64_16550 d700ebbd9ef2a11c1b91073050599553 575 Pfam PF15864 Protein glycosylation ligase 156 180 4.9E-12 T 11-10-2018 IPR031726 Protein glycosylation ligase domain AMS64_16550 d700ebbd9ef2a11c1b91073050599553 575 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 364 549 3.6E-33 T 11-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal AMS64_08405 75f5ce6d6a54c2fdaf8de60e2f2c06d6 251 Pfam PF03942 DTW domain 33 217 1.1E-39 T 11-10-2018 IPR005636 DTW AMS64_08405 75f5ce6d6a54c2fdaf8de60e2f2c06d6 251 SMART SM01144 30 223 6.3E-73 T 11-10-2018 IPR005636 DTW AMS64_21410 5668e2b9c39caac1184c3353e328a8a3 364 Gene3D G3DSA:1.25.40.10 274 360 6.6E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_21410 5668e2b9c39caac1184c3353e328a8a3 364 SUPERFAMILY SSF48452 184 342 1.26E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_21410 5668e2b9c39caac1184c3353e328a8a3 364 Pfam PF14559 Tetratricopeptide repeat 223 285 1.6E-8 T 11-10-2018 AMS64_21410 5668e2b9c39caac1184c3353e328a8a3 364 Pfam PF13432 Tetratricopeptide repeat 289 342 3.6E-6 T 11-10-2018 AMS64_21410 5668e2b9c39caac1184c3353e328a8a3 364 Gene3D G3DSA:1.25.40.10 147 273 9.5E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_02335 e6988b7d819cda5d891788a3e2a9d601 350 Pfam PF01699 Sodium/calcium exchanger protein 27 177 9.4E-14 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMS64_02335 e6988b7d819cda5d891788a3e2a9d601 350 Pfam PF01699 Sodium/calcium exchanger protein 212 344 9.3E-10 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMS64_02335 e6988b7d819cda5d891788a3e2a9d601 350 Gene3D G3DSA:1.20.1420.30 57 326 8.6E-35 T 11-10-2018 AMS64_02335 e6988b7d819cda5d891788a3e2a9d601 350 Gene3D G3DSA:1.20.58.1130 30 241 8.6E-35 T 11-10-2018 AMS64_17145 e62e1320429777d965f943badeaf1819 1109 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 496 812 3.3E-92 T 11-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AMS64_17145 e62e1320429777d965f943badeaf1819 1109 Gene3D G3DSA:3.30.70.100 984 1077 1.7E-20 T 11-10-2018 AMS64_17145 e62e1320429777d965f943badeaf1819 1109 Pfam PF00924 Mechanosensitive ion channel 873 1072 1.4E-57 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMS64_17145 e62e1320429777d965f943badeaf1819 1109 SUPERFAMILY SSF50182 916 981 9.81E-18 T 11-10-2018 IPR010920 LSM domain superfamily AMS64_17145 e62e1320429777d965f943badeaf1819 1109 SUPERFAMILY SSF82689 983 1083 2.35E-27 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMS64_17145 e62e1320429777d965f943badeaf1819 1109 SUPERFAMILY SSF82861 830 914 1.57E-8 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMS64_17145 e62e1320429777d965f943badeaf1819 1109 Gene3D G3DSA:2.30.30.60 931 980 2.3E-14 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMS64_17145 e62e1320429777d965f943badeaf1819 1109 Pfam PF12795 Mechanosensitive ion channel porin domain 43 274 1.5E-47 T 11-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain AMS64_03220 5fd390fd69d6c14c9c7217c198076f04 584 SUPERFAMILY SSF56519 63 234 1.57E-42 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AMS64_03220 5fd390fd69d6c14c9c7217c198076f04 584 SUPERFAMILY SSF56601 235 564 3.22E-90 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMS64_03220 5fd390fd69d6c14c9c7217c198076f04 584 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 19 567 43.47 T 11-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_03220 5fd390fd69d6c14c9c7217c198076f04 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 551 8.0E-78 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMS64_03220 5fd390fd69d6c14c9c7217c198076f04 584 Gene3D G3DSA:3.30.450.330 237 552 7.5E-102 T 11-10-2018 AMS64_03220 5fd390fd69d6c14c9c7217c198076f04 584 Gene3D G3DSA:3.40.710.10 296 476 7.5E-102 T 11-10-2018 AMS64_03220 5fd390fd69d6c14c9c7217c198076f04 584 Gene3D G3DSA:3.90.1310.30 59 235 7.9E-43 T 11-10-2018 AMS64_03220 5fd390fd69d6c14c9c7217c198076f04 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 220 9.1E-15 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMS64_10910 85c780add1b29159cc0834daa167d249 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 2.0E-14 T 11-10-2018 IPR009491 Protein of unknown function DUF1107 AMS64_10910 85c780add1b29159cc0834daa167d249 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 4.1E-28 T 11-10-2018 IPR009491 Protein of unknown function DUF1107 AMS64_10910 85c780add1b29159cc0834daa167d249 68 Gene3D G3DSA:3.30.1910.10 1 64 1.5E-29 T 11-10-2018 AMS64_04665 668eae3ec9f022ea0b153a98fe5967cd 701 Gene3D G3DSA:3.30.450.20 73 238 9.6E-30 T 11-10-2018 AMS64_04665 668eae3ec9f022ea0b153a98fe5967cd 701 Gene3D G3DSA:1.10.287.950 369 701 2.4E-63 T 11-10-2018 AMS64_04665 668eae3ec9f022ea0b153a98fe5967cd 701 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 496 665 2.4E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_04665 668eae3ec9f022ea0b153a98fe5967cd 701 SMART SM00304 370 424 1.5E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_04665 668eae3ec9f022ea0b153a98fe5967cd 701 SUPERFAMILY SSF58104 392 700 1.31E-65 T 11-10-2018 AMS64_04665 668eae3ec9f022ea0b153a98fe5967cd 701 Gene3D G3DSA:3.30.450.20 60 286 9.6E-30 T 11-10-2018 AMS64_04665 668eae3ec9f022ea0b153a98fe5967cd 701 Pfam PF02743 Cache domain 47 300 1.5E-16 T 11-10-2018 IPR033479 Double Cache domain 1 AMS64_04665 668eae3ec9f022ea0b153a98fe5967cd 701 SMART SM00283 439 700 1.0E-59 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_21990 a2759ea45a09b7f7c0623fe3a4fa8af7 259 Gene3D G3DSA:3.40.190.10 119 219 4.1E-26 T 11-10-2018 AMS64_21990 a2759ea45a09b7f7c0623fe3a4fa8af7 259 Gene3D G3DSA:3.40.190.10 42 257 4.1E-26 T 11-10-2018 AMS64_21990 a2759ea45a09b7f7c0623fe3a4fa8af7 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 257 1.6E-22 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_21990 a2759ea45a09b7f7c0623fe3a4fa8af7 259 SUPERFAMILY SSF53850 33 257 2.39E-33 T 11-10-2018 AMS64_06910 bb431fd40eeb74490389f2b8d1e34a16 304 SUPERFAMILY SSF46785 8 91 8.71E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_06910 bb431fd40eeb74490389f2b8d1e34a16 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 5.6E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_06910 bb431fd40eeb74490389f2b8d1e34a16 304 Gene3D G3DSA:1.10.10.10 4 87 2.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_06910 bb431fd40eeb74490389f2b8d1e34a16 304 SUPERFAMILY SSF53850 94 291 1.23E-15 T 11-10-2018 AMS64_06910 bb431fd40eeb74490389f2b8d1e34a16 304 Gene3D G3DSA:3.40.190.290 144 272 1.8E-12 T 11-10-2018 AMS64_06910 bb431fd40eeb74490389f2b8d1e34a16 304 Pfam PF03466 LysR substrate binding domain 95 287 5.5E-13 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 SUPERFAMILY SSF53706 64 650 5.89E-199 T 11-10-2018 AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 Gene3D G3DSA:3.40.50.740 132 622 7.8E-133 T 11-10-2018 AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 68 117 9.9E-11 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 SUPERFAMILY SSF50692 757 956 2.22E-39 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 Gene3D G3DSA:2.20.25.90 67 119 8.6E-12 T 11-10-2018 AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 Gene3D G3DSA:3.40.228.10 200 399 7.8E-133 T 11-10-2018 AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 71 88 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 Pfam PF00384 Molybdopterin oxidoreductase 123 574 4.6E-56 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 PIRSF PIRSF036643 26 597 2.2E-113 T 11-10-2018 AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 PIRSF PIRSF036643 788 958 2.9E-16 T 11-10-2018 AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 SMART SM00926 66 120 3.1E-15 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 Gene3D G3DSA:2.40.40.20 772 956 2.6E-44 T 11-10-2018 AMS64_07175 b1ba23d0a877e85017ce8a66a299ac16 958 Pfam PF01568 Molydopterin dinucleotide binding domain 823 949 2.9E-23 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 SUPERFAMILY SSF52210 282 422 2.09E-28 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 SUPERFAMILY SSF52210 127 277 1.7E-33 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 Gene3D G3DSA:3.40.50.261 128 278 2.5E-41 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 Gene3D G3DSA:3.40.50.261 280 430 1.9E-26 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 SUPERFAMILY SSF56059 456 669 9.19E-22 T 11-10-2018 AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 Pfam PF13302 Acetyltransferase (GNAT) domain 698 837 4.8E-9 T 11-10-2018 IPR000182 GNAT domain AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 Gene3D G3DSA:3.40.630.30 690 859 1.3E-41 T 11-10-2018 AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 SUPERFAMILY SSF55729 697 839 4.29E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 Gene3D G3DSA:3.30.1490.20 474 551 1.8E-51 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 149 275 5.6E-40 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 Gene3D G3DSA:3.40.50.720 4 127 2.8E-34 T 11-10-2018 AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 Gene3D G3DSA:3.30.470.20 456 663 1.8E-51 T 11-10-2018 AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 SUPERFAMILY SSF51735 4 137 2.01E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 Pfam PF13380 CoA binding domain 14 132 4.8E-21 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 Pfam PF13549 ATP-grasp domain 448 666 1.7E-63 T 11-10-2018 AMS64_00990 7e399999c1b23d11b495a65c30861a4a 860 SMART SM00881 9 104 1.7E-26 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AMS64_16385 08be916aee8203fddf8caa74ca711c50 209 Gene3D G3DSA:3.40.50.720 1 209 7.2E-55 T 11-10-2018 AMS64_16385 08be916aee8203fddf8caa74ca711c50 209 SUPERFAMILY SSF51735 2 197 6.02E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_16385 08be916aee8203fddf8caa74ca711c50 209 Pfam PF13460 NAD(P)H-binding 8 148 1.0E-10 T 11-10-2018 IPR016040 NAD(P)-binding domain AMS64_07575 46de02525eb6694cf229058621f4b995 376 Pfam PF08007 Cupin superfamily protein 9 304 3.0E-93 T 11-10-2018 IPR003347 JmjC domain AMS64_07575 46de02525eb6694cf229058621f4b995 376 Gene3D G3DSA:1.10.10.2510 204 376 2.7E-54 T 11-10-2018 AMS64_07575 46de02525eb6694cf229058621f4b995 376 Gene3D G3DSA:2.60.120.650 1 203 6.6E-79 T 11-10-2018 AMS64_07575 46de02525eb6694cf229058621f4b995 376 SUPERFAMILY SSF51197 5 291 7.14E-75 T 11-10-2018 AMS64_07575 46de02525eb6694cf229058621f4b995 376 SMART SM00558 87 214 3.3E-5 T 11-10-2018 IPR003347 JmjC domain AMS64_01635 fd27d40bcaf34c8dd92fca1f664dc06b 177 Pfam PF01923 Cobalamin adenosyltransferase 30 160 4.2E-12 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMS64_01635 fd27d40bcaf34c8dd92fca1f664dc06b 177 SUPERFAMILY SSF89028 10 173 8.44E-31 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMS64_01635 fd27d40bcaf34c8dd92fca1f664dc06b 177 Gene3D G3DSA:1.20.1200.10 23 176 1.0E-18 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMS64_01635 fd27d40bcaf34c8dd92fca1f664dc06b 177 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 30 152 6.0E-19 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMS64_09960 c2252242a5ab19926d85a5533385a603 188 Pfam PF00293 NUDIX domain 30 141 2.7E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_09960 c2252242a5ab19926d85a5533385a603 188 SUPERFAMILY SSF55811 27 179 1.35E-36 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_09960 c2252242a5ab19926d85a5533385a603 188 ProSitePatterns PS01293 Nudix CoA signature. 45 65 - T 11-10-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 AMS64_09960 c2252242a5ab19926d85a5533385a603 188 Gene3D G3DSA:3.90.79.10 8 185 1.1E-46 T 11-10-2018 AMS64_21935 e0ea79260d6f4ad326d900756550662d 254 Gene3D G3DSA:3.40.190.10 28 247 1.6E-25 T 11-10-2018 AMS64_21935 e0ea79260d6f4ad326d900756550662d 254 Gene3D G3DSA:3.40.190.10 105 204 1.6E-25 T 11-10-2018 AMS64_21935 e0ea79260d6f4ad326d900756550662d 254 SMART SM00062 20 250 1.1E-6 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_21935 e0ea79260d6f4ad326d900756550662d 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 247 1.7E-22 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_21935 e0ea79260d6f4ad326d900756550662d 254 SUPERFAMILY SSF53850 17 247 5.25E-31 T 11-10-2018 AMS64_22595 df71f9261e62988c54c2f32616c03560 211 SUPERFAMILY SSF52499 3 200 2.35E-32 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMS64_22595 df71f9261e62988c54c2f32616c03560 211 Gene3D G3DSA:3.40.50.850 3 204 5.2E-36 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMS64_22595 df71f9261e62988c54c2f32616c03560 211 Pfam PF00857 Isochorismatase family 5 200 2.8E-23 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AMS64_18625 0f9fe2d70b7a86d984dd377c6a59798b 59 Pfam PF11346 Protein of unknown function (DUF3149) 4 42 1.0E-13 T 11-10-2018 IPR021494 Protein of unknown function DUF3149 AMS64_21030 62b0a3ac8d351f24d68f24b939d3cbd3 462 Pfam PF00293 NUDIX domain 27 134 3.1E-13 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_21030 62b0a3ac8d351f24d68f24b939d3cbd3 462 SMART SM00014 221 334 1.5E-16 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMS64_21030 62b0a3ac8d351f24d68f24b939d3cbd3 462 SUPERFAMILY SSF48317 166 338 3.27E-23 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMS64_21030 62b0a3ac8d351f24d68f24b939d3cbd3 462 SUPERFAMILY SSF55811 28 154 2.03E-21 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_21030 62b0a3ac8d351f24d68f24b939d3cbd3 462 Gene3D G3DSA:3.90.79.10 27 167 1.4E-18 T 11-10-2018 AMS64_21030 62b0a3ac8d351f24d68f24b939d3cbd3 462 Pfam PF01569 PAP2 superfamily 224 337 5.2E-21 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMS64_21030 62b0a3ac8d351f24d68f24b939d3cbd3 462 ProSitePatterns PS00893 Nudix box signature. 55 76 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMS64_21030 62b0a3ac8d351f24d68f24b939d3cbd3 462 Gene3D G3DSA:1.20.144.10 252 352 2.8E-17 T 11-10-2018 AMS64_21030 62b0a3ac8d351f24d68f24b939d3cbd3 462 PRINTS PR00502 NUDIX hydrolase family signature 64 79 3.2E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMS64_21030 62b0a3ac8d351f24d68f24b939d3cbd3 462 PRINTS PR00502 NUDIX hydrolase family signature 50 64 3.2E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 SUPERFAMILY SSF52413 307 434 1.96E-36 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 185 8.1E-61 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 SMART SM00984 320 424 1.8E-48 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 PIRSF PIRSF500134 1 442 4.2E-181 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 1.8E-26 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 Gene3D G3DSA:3.40.50.720 235 456 2.3E-75 T 11-10-2018 AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 SUPERFAMILY SSF51735 1 195 1.43E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 SUPERFAMILY SSF48179 204 301 5.44E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 PIRSF PIRSF000124 1 439 1.2E-144 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 Gene3D G3DSA:1.20.5.100 203 234 6.9E-18 T 11-10-2018 AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 3.1E-38 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 Gene3D G3DSA:3.40.50.720 1 202 3.6E-74 T 11-10-2018 AMS64_19130 e6b62ce87abf3c59396a42af252c884b 459 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 4.8E-133 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMS64_14780 49f59a6f487b23e3a6b0f9d6cc41766a 271 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 12 237 2.2E-117 T 11-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 AMS64_14780 49f59a6f487b23e3a6b0f9d6cc41766a 271 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 12 236 8.1E-113 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related AMS64_14780 49f59a6f487b23e3a6b0f9d6cc41766a 271 PIRSF PIRSF028756 1 266 4.8E-135 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 AMS64_14780 49f59a6f487b23e3a6b0f9d6cc41766a 271 SUPERFAMILY SSF52540 43 232 1.57E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_14780 49f59a6f487b23e3a6b0f9d6cc41766a 271 Gene3D G3DSA:3.40.50.300 1 245 6.6E-99 T 11-10-2018 AMS64_00445 a79068b74f8e7199ecf5101b4c854c44 244 Gene3D G3DSA:3.40.50.300 1 244 9.3E-76 T 11-10-2018 AMS64_00445 a79068b74f8e7199ecf5101b4c854c44 244 SMART SM00382 26 216 1.2E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_00445 a79068b74f8e7199ecf5101b4c854c44 244 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_00445 a79068b74f8e7199ecf5101b4c854c44 244 PIRSF PIRSF039085 1 244 7.4E-99 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMS64_00445 a79068b74f8e7199ecf5101b4c854c44 244 SUPERFAMILY SSF52540 1 238 2.05E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00445 a79068b74f8e7199ecf5101b4c854c44 244 Pfam PF00005 ABC transporter 17 168 1.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_02440 cfdd90904fe6ea3cbd0c9fc01a3b1781 88 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 7 87 1.0E-22 T 11-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 AMS64_02440 cfdd90904fe6ea3cbd0c9fc01a3b1781 88 Pfam PF10963 Phage tail assembly chaperone 7 88 1.5E-34 T 11-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 AMS64_20610 6b60cbc7db938d0cd9c83e232f8db939 747 SUPERFAMILY SSF160246 489 627 1.02E-23 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AMS64_20610 6b60cbc7db938d0cd9c83e232f8db939 747 SUPERFAMILY SSF53448 73 440 1.04E-15 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_20610 6b60cbc7db938d0cd9c83e232f8db939 747 Gene3D G3DSA:3.90.550.10 65 292 1.6E-5 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_20610 6b60cbc7db938d0cd9c83e232f8db939 747 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 526 629 1.3E-12 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal AMS64_20610 6b60cbc7db938d0cd9c83e232f8db939 747 Pfam PF13632 Glycosyl transferase family group 2 167 385 3.8E-42 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMS64_08920 ccb31125c0658369bb878b7da570318f 413 Pfam PF07819 PGAP1-like protein 215 274 1.4E-7 T 11-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 AMS64_08920 ccb31125c0658369bb878b7da570318f 413 SUPERFAMILY SSF53474 148 405 3.1E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_11425 7aa87b38ee1ef74179208b92ba273242 263 SUPERFAMILY SSF53474 10 255 4.63E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_11425 7aa87b38ee1ef74179208b92ba273242 263 Pfam PF00561 alpha/beta hydrolase fold 15 116 1.1E-22 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_11425 7aa87b38ee1ef74179208b92ba273242 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 87 100 6.7E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_11425 7aa87b38ee1ef74179208b92ba273242 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 6.7E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_11425 7aa87b38ee1ef74179208b92ba273242 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 216 6.7E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_11425 7aa87b38ee1ef74179208b92ba273242 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 6.7E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_11425 7aa87b38ee1ef74179208b92ba273242 263 Gene3D G3DSA:3.40.50.1820 4 257 2.0E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_11425 7aa87b38ee1ef74179208b92ba273242 263 PRINTS PR00412 Epoxide hydrolase signature 20 38 3.8E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMS64_11425 7aa87b38ee1ef74179208b92ba273242 263 PRINTS PR00412 Epoxide hydrolase signature 200 216 3.8E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMS64_11425 7aa87b38ee1ef74179208b92ba273242 263 PRINTS PR00412 Epoxide hydrolase signature 232 254 3.8E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMS64_18820 20452748bf12af9d2a5c8d7ea201e00d 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 2.0E-56 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMS64_18820 20452748bf12af9d2a5c8d7ea201e00d 209 Gene3D G3DSA:3.40.50.150 30 208 2.0E-59 T 11-10-2018 AMS64_18820 20452748bf12af9d2a5c8d7ea201e00d 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 207 3.5E-91 T 11-10-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 AMS64_18820 20452748bf12af9d2a5c8d7ea201e00d 209 SUPERFAMILY SSF53335 31 208 5.78E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_18820 20452748bf12af9d2a5c8d7ea201e00d 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.132 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AMS64_18820 20452748bf12af9d2a5c8d7ea201e00d 209 PIRSF PIRSF005461 1 209 1.0E-81 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AMS64_20645 228324cf450a16a0097ed163fe93cad3 296 SUPERFAMILY SSF161098 29 280 3.01E-55 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_20645 228324cf450a16a0097ed163fe93cad3 296 Gene3D G3DSA:1.10.3720.10 33 290 7.9E-60 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_20645 228324cf450a16a0097ed163fe93cad3 296 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 31 287 1.3E-116 T 11-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 AMS64_20645 228324cf450a16a0097ed163fe93cad3 296 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 28 285 5.1E-97 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AMS64_20645 228324cf450a16a0097ed163fe93cad3 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 286 2.3E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_11625 e967a9e078f87995efd7ec36073d8fc3 434 PRINTS PR00481 Cytosol aminopeptidase signature 194 211 2.7E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_11625 e967a9e078f87995efd7ec36073d8fc3 434 PRINTS PR00481 Cytosol aminopeptidase signature 275 295 2.7E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_11625 e967a9e078f87995efd7ec36073d8fc3 434 PRINTS PR00481 Cytosol aminopeptidase signature 216 237 2.7E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_11625 e967a9e078f87995efd7ec36073d8fc3 434 PRINTS PR00481 Cytosol aminopeptidase signature 253 274 2.7E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_11625 e967a9e078f87995efd7ec36073d8fc3 434 PRINTS PR00481 Cytosol aminopeptidase signature 303 318 2.7E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMS64_11625 e967a9e078f87995efd7ec36073d8fc3 434 Pfam PF12404 Peptidase 5 84 2.2E-29 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AMS64_11625 e967a9e078f87995efd7ec36073d8fc3 434 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 113 425 5.4E-95 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMS64_11625 e967a9e078f87995efd7ec36073d8fc3 434 SUPERFAMILY SSF53187 107 431 2.98E-93 T 11-10-2018 AMS64_11625 e967a9e078f87995efd7ec36073d8fc3 434 Gene3D G3DSA:3.40.630.10 93 434 4.0E-99 T 11-10-2018 AMS64_11625 e967a9e078f87995efd7ec36073d8fc3 434 PIRSF PIRSF036388 1 434 3.2E-184 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AMS64_11625 e967a9e078f87995efd7ec36073d8fc3 434 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 279 286 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMS64_18590 54a4d92ab1dc3bfa347b85cc2ec534ab 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 5.1E-63 T 11-10-2018 IPR008514 Type VI secretion system effector, Hcp AMS64_18590 54a4d92ab1dc3bfa347b85cc2ec534ab 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.0E-30 T 11-10-2018 IPR008514 Type VI secretion system effector, Hcp AMS64_18590 54a4d92ab1dc3bfa347b85cc2ec534ab 172 SUPERFAMILY SSF141452 3 168 6.15E-38 T 11-10-2018 IPR036624 Hcp1-like superfamily AMS64_18590 54a4d92ab1dc3bfa347b85cc2ec534ab 172 Gene3D G3DSA:2.30.110.20 2 172 3.9E-67 T 11-10-2018 IPR036624 Hcp1-like superfamily AMS64_19960 1dcfaedbfcf6004a76236206ace35443 149 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 1.4E-31 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AMS64_19960 1dcfaedbfcf6004a76236206ace35443 149 Gene3D G3DSA:3.40.630.30 3 146 2.6E-38 T 11-10-2018 AMS64_19960 1dcfaedbfcf6004a76236206ace35443 149 SUPERFAMILY SSF55729 2 145 1.91E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_19960 1dcfaedbfcf6004a76236206ace35443 149 Pfam PF00583 Acetyltransferase (GNAT) family 22 120 4.2E-15 T 11-10-2018 IPR000182 GNAT domain AMS64_16335 ad07822da68203797e4f6f790aab2031 540 Gene3D G3DSA:1.10.287.950 211 540 2.3E-71 T 11-10-2018 AMS64_16335 ad07822da68203797e4f6f790aab2031 540 SMART SM00283 278 539 9.1E-66 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_16335 ad07822da68203797e4f6f790aab2031 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 506 7.4E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_16335 ad07822da68203797e4f6f790aab2031 540 Pfam PF00672 HAMP domain 212 258 2.4E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_16335 ad07822da68203797e4f6f790aab2031 540 SUPERFAMILY SSF58104 233 540 2.88E-70 T 11-10-2018 AMS64_16335 ad07822da68203797e4f6f790aab2031 540 SMART SM00304 211 263 1.8E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_01025 f70230c5179d7df645358ab6e39d7462 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 58 4.4E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_01025 f70230c5179d7df645358ab6e39d7462 198 SUPERFAMILY SSF46689 6 72 2.36E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_01025 f70230c5179d7df645358ab6e39d7462 198 Gene3D G3DSA:1.10.357.10 8 196 5.4E-64 T 11-10-2018 AMS64_01025 f70230c5179d7df645358ab6e39d7462 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 40.648 T 11-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 AMS64_02000 351a8124e6a95dcf4d8d98f5d2c68db7 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.366 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02000 351a8124e6a95dcf4d8d98f5d2c68db7 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 5.2E-23 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02000 351a8124e6a95dcf4d8d98f5d2c68db7 63 SUPERFAMILY SSF46561 1 61 6.67E-22 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02000 351a8124e6a95dcf4d8d98f5d2c68db7 63 Gene3D G3DSA:1.10.287.310 1 63 4.3E-30 T 11-10-2018 AMS64_02000 351a8124e6a95dcf4d8d98f5d2c68db7 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02000 351a8124e6a95dcf4d8d98f5d2c68db7 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.1E-23 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_17775 b435e4cb8b297842d25ac73e2bf629c9 426 PIRSF PIRSF006060 1 414 7.7E-56 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_17775 b435e4cb8b297842d25ac73e2bf629c9 426 Pfam PF13520 Amino acid permease 8 365 1.3E-40 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_17775 b435e4cb8b297842d25ac73e2bf629c9 426 Gene3D G3DSA:1.20.1740.10 3 421 7.8E-60 T 11-10-2018 AMS64_00890 eeef84fdf505d3eadca39b16fd236238 190 Pfam PF03352 Methyladenine glycosylase 7 182 4.5E-77 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AMS64_00890 eeef84fdf505d3eadca39b16fd236238 190 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 182 1.7E-75 T 11-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 AMS64_00890 eeef84fdf505d3eadca39b16fd236238 190 Gene3D G3DSA:1.10.340.30 3 187 4.8E-80 T 11-10-2018 AMS64_00890 eeef84fdf505d3eadca39b16fd236238 190 SUPERFAMILY SSF48150 3 186 2.83E-77 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMS64_19295 05a9cfb78475c70a81bf9e619a2dba6f 155 SUPERFAMILY SSF53271 3 144 3.83E-26 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMS64_19295 05a9cfb78475c70a81bf9e619a2dba6f 155 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 155 39.347 T 11-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 AMS64_19295 05a9cfb78475c70a81bf9e619a2dba6f 155 Pfam PF00156 Phosphoribosyl transferase domain 15 147 4.1E-12 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMS64_19295 05a9cfb78475c70a81bf9e619a2dba6f 155 Gene3D G3DSA:3.40.50.2020 1 154 5.4E-38 T 11-10-2018 AMS64_15855 4bc4f26c71e986683aff93ea48ff3df9 399 SUPERFAMILY SSF109604 152 322 1.35E-32 T 11-10-2018 AMS64_15855 4bc4f26c71e986683aff93ea48ff3df9 399 TIGRFAM TIGR00277 HDIG: HDIG domain 160 251 3.6E-8 T 11-10-2018 IPR006675 HDIG domain AMS64_15855 4bc4f26c71e986683aff93ea48ff3df9 399 Pfam PF13487 HD domain 211 273 2.0E-19 T 11-10-2018 AMS64_15855 4bc4f26c71e986683aff93ea48ff3df9 399 SMART SM00471 156 292 1.5E-7 T 11-10-2018 IPR003607 HD/PDEase domain AMS64_15855 4bc4f26c71e986683aff93ea48ff3df9 399 Pfam PF11871 Domain of unknown function (DUF3391) 10 128 1.0E-13 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 AMS64_15855 4bc4f26c71e986683aff93ea48ff3df9 399 Gene3D G3DSA:1.10.3210.10 7 324 1.6E-70 T 11-10-2018 AMS64_03100 656e8eb43a4757d44fe97c18c7f013f5 400 Pfam PF00460 Flagella basal body rod protein 4 33 3.9E-8 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMS64_03100 656e8eb43a4757d44fe97c18c7f013f5 400 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 334 396 5.0E-16 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMS64_03100 656e8eb43a4757d44fe97c18c7f013f5 400 Pfam PF07559 Flagellar basal body protein FlaE 171 281 4.1E-20 T 11-10-2018 IPR011491 Flagellar hook protein FlgE AMS64_03100 656e8eb43a4757d44fe97c18c7f013f5 400 Gene3D G3DSA:2.60.98.20 144 282 8.5E-31 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily AMS64_03100 656e8eb43a4757d44fe97c18c7f013f5 400 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 382 1.8E-93 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMS64_03100 656e8eb43a4757d44fe97c18c7f013f5 400 SUPERFAMILY SSF117143 73 361 2.62E-77 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMS64_18130 ba50d9b323ce8b8370b76fb412696e5c 760 SMART SM00028 368 401 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_18130 ba50d9b323ce8b8370b76fb412696e5c 760 SMART SM00028 408 441 320.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_18130 ba50d9b323ce8b8370b76fb412696e5c 760 SMART SM00028 85 118 4.6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_18130 ba50d9b323ce8b8370b76fb412696e5c 760 SMART SM00028 288 321 32.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_18130 ba50d9b323ce8b8370b76fb412696e5c 760 SMART SM00028 328 361 180.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_18130 ba50d9b323ce8b8370b76fb412696e5c 760 SUPERFAMILY SSF48452 322 439 8.18E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_18130 ba50d9b323ce8b8370b76fb412696e5c 760 SUPERFAMILY SSF48452 182 356 1.14E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_18130 ba50d9b323ce8b8370b76fb412696e5c 760 Gene3D G3DSA:1.25.40.10 177 473 3.3E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_09510 025dc7ea4fa96738eae4210513516b6c 212 SUPERFAMILY SSF48657 2 109 2.35E-35 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily AMS64_09510 025dc7ea4fa96738eae4210513516b6c 212 Pfam PF04352 ProQ/FINO family 8 115 1.0E-40 T 11-10-2018 IPR016103 ProQ/FinO domain AMS64_09510 025dc7ea4fa96738eae4210513516b6c 212 Pfam PF17516 ProQ C-terminal domain 162 211 1.8E-22 T 11-10-2018 IPR035236 RNA chaperone ProQ, C-terminal AMS64_09510 025dc7ea4fa96738eae4210513516b6c 212 Gene3D G3DSA:1.10.1710.10 1 107 2.4E-21 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily AMS64_09510 025dc7ea4fa96738eae4210513516b6c 212 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 212 27.583 T 11-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 AMS64_09510 025dc7ea4fa96738eae4210513516b6c 212 SMART SM00945 5 119 1.2E-59 T 11-10-2018 IPR016103 ProQ/FinO domain AMS64_16755 30b513ffbd3648970155d065c97b2294 442 Pfam PF00919 Uncharacterized protein family UPF0004 9 95 2.9E-21 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AMS64_16755 30b513ffbd3648970155d065c97b2294 442 Gene3D G3DSA:3.80.30.20 138 379 3.6E-75 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMS64_16755 30b513ffbd3648970155d065c97b2294 442 Gene3D G3DSA:2.40.50.140 380 442 1.5E-21 T 11-10-2018 AMS64_16755 30b513ffbd3648970155d065c97b2294 442 Pfam PF04055 Radical SAM superfamily 146 323 5.3E-32 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_16755 30b513ffbd3648970155d065c97b2294 442 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 4.6E-109 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AMS64_16755 30b513ffbd3648970155d065c97b2294 442 SUPERFAMILY SSF102114 120 372 2.35E-55 T 11-10-2018 AMS64_16755 30b513ffbd3648970155d065c97b2294 442 Gene3D G3DSA:3.40.50.12160 9 137 1.3E-28 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMS64_16755 30b513ffbd3648970155d065c97b2294 442 SMART SM00729 140 365 1.6E-56 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMS64_16755 30b513ffbd3648970155d065c97b2294 442 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMS64_16755 30b513ffbd3648970155d065c97b2294 442 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 437 2.5E-189 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AMS64_16755 30b513ffbd3648970155d065c97b2294 442 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 62.526 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AMS64_19935 7066582c9ad2e2094a88e072aae84ab8 240 SUPERFAMILY SSF51735 5 239 6.4E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_19935 7066582c9ad2e2094a88e072aae84ab8 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 182 0.0037 T 11-10-2018 AMS64_19935 7066582c9ad2e2094a88e072aae84ab8 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 236 3.1E-35 T 11-10-2018 AMS64_19935 7066582c9ad2e2094a88e072aae84ab8 240 Gene3D G3DSA:3.40.50.720 1 238 4.2E-51 T 11-10-2018 AMS64_19935 7066582c9ad2e2094a88e072aae84ab8 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 2.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_19935 7066582c9ad2e2094a88e072aae84ab8 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_19935 7066582c9ad2e2094a88e072aae84ab8 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_19935 7066582c9ad2e2094a88e072aae84ab8 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_19935 7066582c9ad2e2094a88e072aae84ab8 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_19935 7066582c9ad2e2094a88e072aae84ab8 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_04840 082810e6a0b130fb21be7e44e1f6ca8e 116 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 86 7.1E-13 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMS64_04840 082810e6a0b130fb21be7e44e1f6ca8e 116 SUPERFAMILY SSF54909 5 86 6.19E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMS64_04840 082810e6a0b130fb21be7e44e1f6ca8e 116 Gene3D G3DSA:3.30.70.100 5 110 3.0E-21 T 11-10-2018 AMS64_19915 39ee4dd13d9fbb7fd3e26cfaa539f4c7 297 Gene3D G3DSA:1.10.10.10 2 87 4.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_19915 39ee4dd13d9fbb7fd3e26cfaa539f4c7 297 Pfam PF03466 LysR substrate binding domain 93 289 4.4E-23 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_19915 39ee4dd13d9fbb7fd3e26cfaa539f4c7 297 SUPERFAMILY SSF46785 3 85 1.27E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_19915 39ee4dd13d9fbb7fd3e26cfaa539f4c7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_19915 39ee4dd13d9fbb7fd3e26cfaa539f4c7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_19915 39ee4dd13d9fbb7fd3e26cfaa539f4c7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_19915 39ee4dd13d9fbb7fd3e26cfaa539f4c7 297 Gene3D G3DSA:3.40.190.10 162 265 9.5E-18 T 11-10-2018 AMS64_19915 39ee4dd13d9fbb7fd3e26cfaa539f4c7 297 SUPERFAMILY SSF53850 93 295 1.56E-26 T 11-10-2018 AMS64_19915 39ee4dd13d9fbb7fd3e26cfaa539f4c7 297 Gene3D G3DSA:3.40.190.10 94 276 9.5E-18 T 11-10-2018 AMS64_19915 39ee4dd13d9fbb7fd3e26cfaa539f4c7 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.9E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04960 fdfc4d076c07f56b3c2db4a18cae3c11 265 SUPERFAMILY SSF101386 5 107 8.67E-26 T 11-10-2018 AMS64_04960 fdfc4d076c07f56b3c2db4a18cae3c11 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 232 3.4E-7 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMS64_04960 fdfc4d076c07f56b3c2db4a18cae3c11 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 5.9E-26 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMS64_04960 fdfc4d076c07f56b3c2db4a18cae3c11 265 TIGRFAM TIGR00444 mazG: MazG family protein 13 260 1.1E-104 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG AMS64_04960 fdfc4d076c07f56b3c2db4a18cae3c11 265 SUPERFAMILY SSF101386 139 239 6.54E-24 T 11-10-2018 AMS64_04960 fdfc4d076c07f56b3c2db4a18cae3c11 265 Gene3D G3DSA:1.10.287.1080 132 264 3.7E-47 T 11-10-2018 AMS64_04960 fdfc4d076c07f56b3c2db4a18cae3c11 265 Gene3D G3DSA:1.10.287.1080 4 128 2.4E-45 T 11-10-2018 AMS64_15885 299825b8b5807b3372c13f9188b85c9f 616 SUPERFAMILY SSF53850 56 559 4.46E-93 T 11-10-2018 AMS64_15885 299825b8b5807b3372c13f9188b85c9f 616 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 105 484 2.4E-57 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AMS64_15885 299825b8b5807b3372c13f9188b85c9f 616 Gene3D G3DSA:3.40.190.10 33 325 3.0E-51 T 11-10-2018 AMS64_15885 299825b8b5807b3372c13f9188b85c9f 616 Gene3D G3DSA:3.10.105.10 326 541 2.4E-40 T 11-10-2018 AMS64_15885 299825b8b5807b3372c13f9188b85c9f 616 PIRSF PIRSF002741 19 569 4.6E-70 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMS64_20025 5a1218e5f10a82ce868dd705aad026da 128 Pfam PF01250 Ribosomal protein S6 3 91 2.1E-28 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20025 5a1218e5f10a82ce868dd705aad026da 128 SUPERFAMILY SSF54995 1 103 7.19E-38 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20025 5a1218e5f10a82ce868dd705aad026da 128 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.948 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMS64_20025 5a1218e5f10a82ce868dd705aad026da 128 Gene3D G3DSA:3.30.70.60 1 92 1.7E-32 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMS64_20025 5a1218e5f10a82ce868dd705aad026da 128 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 4.2E-38 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_17065 be3045ffc9a96e8b6c7aaf18fd575097 487 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 32 479 3.3E-206 T 11-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AMS64_17065 be3045ffc9a96e8b6c7aaf18fd575097 487 SUPERFAMILY SSF53720 8 484 2.49E-173 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMS64_17065 be3045ffc9a96e8b6c7aaf18fd575097 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMS64_17065 be3045ffc9a96e8b6c7aaf18fd575097 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMS64_17065 be3045ffc9a96e8b6c7aaf18fd575097 487 Gene3D G3DSA:3.40.309.10 261 450 5.0E-182 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMS64_17065 be3045ffc9a96e8b6c7aaf18fd575097 487 Pfam PF00171 Aldehyde dehydrogenase family 21 480 5.0E-173 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMS64_17065 be3045ffc9a96e8b6c7aaf18fd575097 487 Gene3D G3DSA:3.40.605.10 27 475 5.0E-182 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMS64_04440 a25781ef02422818bcda07dbcd986e8b 260 SMART SM00421 180 237 6.5E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_04440 a25781ef02422818bcda07dbcd986e8b 260 SUPERFAMILY SSF46894 164 243 5.1E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_04440 a25781ef02422818bcda07dbcd986e8b 260 Gene3D G3DSA:3.30.450.80 2 172 1.4E-44 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AMS64_04440 a25781ef02422818bcda07dbcd986e8b 260 Gene3D G3DSA:1.10.10.10 178 243 7.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_04440 a25781ef02422818bcda07dbcd986e8b 260 Pfam PF03472 Autoinducer binding domain 22 165 8.8E-34 T 11-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMS64_04440 a25781ef02422818bcda07dbcd986e8b 260 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 213 225 6.8E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_04440 a25781ef02422818bcda07dbcd986e8b 260 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 197 6.8E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_04440 a25781ef02422818bcda07dbcd986e8b 260 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 213 6.8E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_04440 a25781ef02422818bcda07dbcd986e8b 260 Pfam PF00196 Bacterial regulatory proteins, luxR family 182 235 1.1E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_04440 a25781ef02422818bcda07dbcd986e8b 260 SUPERFAMILY SSF75516 4 170 2.35E-38 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AMS64_11285 44e435f0e19d9cd7d3976a4e47d638fa 259 Pfam PF09850 Type VI secretion system protein DotU 39 241 4.2E-62 T 11-10-2018 IPR017732 Type IV / VI secretion system, DotU AMS64_11285 44e435f0e19d9cd7d3976a4e47d638fa 259 Gene3D G3DSA:1.25.40.590 35 193 6.3E-58 T 11-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily AMS64_11285 44e435f0e19d9cd7d3976a4e47d638fa 259 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 38 248 2.6E-70 T 11-10-2018 IPR017732 Type IV / VI secretion system, DotU AMS64_09820 517ef6b3c54329b0d65cc509a6b6bce9 319 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 230 318 1.7E-35 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMS64_09820 517ef6b3c54329b0d65cc509a6b6bce9 319 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 8.4E-32 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMS64_09820 517ef6b3c54329b0d65cc509a6b6bce9 319 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 318 1.2E-139 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMS64_09820 517ef6b3c54329b0d65cc509a6b6bce9 319 SUPERFAMILY SSF53901 3 318 1.06E-69 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_09820 517ef6b3c54329b0d65cc509a6b6bce9 319 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 319 69.668 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMS64_09820 517ef6b3c54329b0d65cc509a6b6bce9 319 Gene3D G3DSA:3.40.47.10 1 319 3.3E-123 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_09425 74e0c057c92e488d3f7fcac584c4e734 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 290 3.8E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_09425 74e0c057c92e488d3f7fcac584c4e734 295 Gene3D G3DSA:1.10.3720.10 18 287 2.7E-57 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_09425 74e0c057c92e488d3f7fcac584c4e734 295 SUPERFAMILY SSF161098 17 284 2.06E-57 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 27 336 3.3E-127 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 548 53.183 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 SUPERFAMILY SSF50715 339 547 9.94E-76 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 Gene3D G3DSA:3.90.800.10 100 208 3.9E-106 T 11-10-2018 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 Gene3D G3DSA:3.40.50.620 29 246 3.9E-106 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 27 550 2.9E-293 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 SUPERFAMILY SSF52374 9 336 1.89E-103 T 11-10-2018 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 Gene3D G3DSA:1.10.1160.10 260 338 1.5E-36 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 PRINTS PR00987 Glutamyl-tRNA synthetase signature 209 219 7.4E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 PRINTS PR00987 Glutamyl-tRNA synthetase signature 30 42 7.4E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 55 7.4E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 PRINTS PR00987 Glutamyl-tRNA synthetase signature 59 72 7.4E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 Gene3D G3DSA:2.40.240.10 347 463 8.2E-80 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 33 44 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 Gene3D G3DSA:2.40.240.10 339 545 8.2E-80 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMS64_16105 c234057fe3f797c03f3d0b0b4385def0 553 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 339 527 5.0E-61 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMS64_17460 fe5e1a90b300bed30f9d89b86735a663 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 442 1.0E-160 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17460 fe5e1a90b300bed30f9d89b86735a663 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17460 fe5e1a90b300bed30f9d89b86735a663 458 Pfam PF01235 Sodium:alanine symporter family 59 449 5.7E-144 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17460 fe5e1a90b300bed30f9d89b86735a663 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 5.1E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17460 fe5e1a90b300bed30f9d89b86735a663 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 5.1E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17460 fe5e1a90b300bed30f9d89b86735a663 458 PRINTS PR00175 Sodium/alanine symporter signature 352 374 5.1E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17460 fe5e1a90b300bed30f9d89b86735a663 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 5.1E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17460 fe5e1a90b300bed30f9d89b86735a663 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 5.1E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17460 fe5e1a90b300bed30f9d89b86735a663 458 PRINTS PR00175 Sodium/alanine symporter signature 411 431 5.1E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 Gene3D G3DSA:1.10.287.130 199 291 3.2E-28 T 11-10-2018 AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 SUPERFAMILY SSF52172 473 600 1.42E-39 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 293 2.5E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 453 1.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 Pfam PF00072 Response regulator receiver domain 476 588 1.4E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 SMART SM00387 340 456 1.9E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 SUPERFAMILY SSF55874 282 454 2.75E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 Gene3D G3DSA:3.30.565.10 292 457 1.4E-51 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 Gene3D G3DSA:3.40.50.12740 473 607 1.5E-42 T 11-10-2018 AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 SMART SM00448 474 588 4.5E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 SMART SM00388 228 293 6.3E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 SUPERFAMILY SSF47384 212 294 1.33E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 5.0E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 5.0E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 5.0E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_10505 50359cfcbe0934495e145ecb680484dd 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 5.0E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_09945 d902109addd6755bf3e2cf265156c112 192 SMART SM00782 6 52 1.9E-12 T 11-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial AMS64_09945 d902109addd6755bf3e2cf265156c112 192 Gene3D G3DSA:2.30.30.40 123 192 1.1E-27 T 11-10-2018 AMS64_09945 d902109addd6755bf3e2cf265156c112 192 Pfam PF03831 PhnA domain 127 192 9.8E-26 T 11-10-2018 IPR013988 PhnA protein, C-terminal AMS64_09945 d902109addd6755bf3e2cf265156c112 192 SUPERFAMILY SSF82057 121 192 3.94E-23 T 11-10-2018 AMS64_01850 8daac6a107bb0b4b67e1078efad06ad3 169 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 164 1.3E-64 T 11-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AMS64_01850 8daac6a107bb0b4b67e1078efad06ad3 169 SUPERFAMILY SSF52540 3 167 2.08E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01850 8daac6a107bb0b4b67e1078efad06ad3 169 Gene3D G3DSA:3.40.50.300 2 169 7.8E-65 T 11-10-2018 AMS64_01850 8daac6a107bb0b4b67e1078efad06ad3 169 Pfam PF01202 Shikimate kinase 13 125 7.7E-11 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMS64_16420 59e3ca4ac1d575cc78d10746efe16e80 379 Gene3D G3DSA:2.40.420.20 304 357 1.8E-52 T 11-10-2018 AMS64_16420 59e3ca4ac1d575cc78d10746efe16e80 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 278 9.0E-16 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMS64_16420 59e3ca4ac1d575cc78d10746efe16e80 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 357 9.5E-36 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_16420 59e3ca4ac1d575cc78d10746efe16e80 379 SUPERFAMILY SSF111369 48 241 7.85E-13 T 11-10-2018 AMS64_16420 59e3ca4ac1d575cc78d10746efe16e80 379 Gene3D G3DSA:2.40.50.100 56 222 1.8E-52 T 11-10-2018 AMS64_16420 59e3ca4ac1d575cc78d10746efe16e80 379 Gene3D G3DSA:2.40.30.170 48 303 1.8E-52 T 11-10-2018 AMS64_16420 59e3ca4ac1d575cc78d10746efe16e80 379 Gene3D G3DSA:1.10.287.470 90 181 1.8E-52 T 11-10-2018 AMS64_17035 247e2e4ff93d539637890a1a1700af39 461 Gene3D G3DSA:1.10.287.130 204 310 2.2E-5 T 11-10-2018 AMS64_17035 247e2e4ff93d539637890a1a1700af39 461 SMART SM00387 359 461 1.1E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_17035 247e2e4ff93d539637890a1a1700af39 461 SUPERFAMILY SSF55874 326 461 1.44E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_17035 247e2e4ff93d539637890a1a1700af39 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 3.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_17035 247e2e4ff93d539637890a1a1700af39 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 3.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_17035 247e2e4ff93d539637890a1a1700af39 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 3.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_17035 247e2e4ff93d539637890a1a1700af39 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 3.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_17035 247e2e4ff93d539637890a1a1700af39 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 461 1.5E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_17035 247e2e4ff93d539637890a1a1700af39 461 Gene3D G3DSA:3.30.565.10 318 461 2.4E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_20175 4d316db45a66ed5ab40fe30db3a627e9 311 Pfam PF02401 LytB protein 3 282 1.0E-93 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AMS64_20175 4d316db45a66ed5ab40fe30db3a627e9 311 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.742 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AMS64_20175 4d316db45a66ed5ab40fe30db3a627e9 311 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 3.6E-102 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AMS64_20175 4d316db45a66ed5ab40fe30db3a627e9 311 Gene3D G3DSA:3.40.50.11270 12 96 1.0E-112 T 11-10-2018 AMS64_20175 4d316db45a66ed5ab40fe30db3a627e9 311 Gene3D G3DSA:3.40.1010.20 97 196 1.0E-112 T 11-10-2018 AMS64_20175 4d316db45a66ed5ab40fe30db3a627e9 311 Gene3D G3DSA:3.40.1010.20 6 281 1.0E-112 T 11-10-2018 AMS64_03050 818b03fed201026d5f03a9215e85064a 342 Gene3D G3DSA:1.10.220.30 12 94 3.5E-17 T 11-10-2018 AMS64_03050 818b03fed201026d5f03a9215e85064a 342 Gene3D G3DSA:1.10.220.30 100 203 2.2E-19 T 11-10-2018 AMS64_03050 818b03fed201026d5f03a9215e85064a 342 Pfam PF14841 FliG middle domain 126 198 2.6E-18 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AMS64_03050 818b03fed201026d5f03a9215e85064a 342 SUPERFAMILY SSF48029 125 333 6.02E-55 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMS64_03050 818b03fed201026d5f03a9215e85064a 342 SUPERFAMILY SSF48029 15 109 1.7E-15 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMS64_03050 818b03fed201026d5f03a9215e85064a 342 Pfam PF01706 FliG C-terminal domain 228 332 1.9E-27 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AMS64_03050 818b03fed201026d5f03a9215e85064a 342 Pfam PF14842 FliG N-terminal domain 17 110 1.2E-20 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AMS64_03050 818b03fed201026d5f03a9215e85064a 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 205 230 2.0E-32 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_03050 818b03fed201026d5f03a9215e85064a 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 124 147 2.0E-32 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_03050 818b03fed201026d5f03a9215e85064a 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 281 307 2.0E-32 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_03050 818b03fed201026d5f03a9215e85064a 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 44 70 2.0E-32 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_03050 818b03fed201026d5f03a9215e85064a 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 15 31 2.0E-32 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_03050 818b03fed201026d5f03a9215e85064a 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 257 277 2.0E-32 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMS64_03050 818b03fed201026d5f03a9215e85064a 342 Gene3D G3DSA:1.10.220.30 205 338 2.5E-31 T 11-10-2018 AMS64_21355 5b0d009f677cff63d919ad61911a4bc5 346 Gene3D G3DSA:3.30.420.40 14 330 4.9E-130 T 11-10-2018 AMS64_21355 5b0d009f677cff63d919ad61911a4bc5 346 Gene3D G3DSA:3.90.640.10 189 262 4.9E-130 T 11-10-2018 AMS64_21355 5b0d009f677cff63d919ad61911a4bc5 346 SUPERFAMILY SSF53067 9 151 1.68E-38 T 11-10-2018 AMS64_21355 5b0d009f677cff63d919ad61911a4bc5 346 SUPERFAMILY SSF53067 152 338 1.03E-49 T 11-10-2018 AMS64_21355 5b0d009f677cff63d919ad61911a4bc5 346 Pfam PF06723 MreB/Mbl protein 11 337 2.2E-149 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMS64_21355 5b0d009f677cff63d919ad61911a4bc5 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 71 94 6.9E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMS64_21355 5b0d009f677cff63d919ad61911a4bc5 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 51 69 6.9E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMS64_21355 5b0d009f677cff63d919ad61911a4bc5 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 6.9E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMS64_21355 5b0d009f677cff63d919ad61911a4bc5 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 6.9E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMS64_21355 5b0d009f677cff63d919ad61911a4bc5 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 6.9E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMS64_21355 5b0d009f677cff63d919ad61911a4bc5 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 338 1.0E-165 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMS64_21355 5b0d009f677cff63d919ad61911a4bc5 346 Gene3D G3DSA:3.30.420.40 157 320 4.9E-130 T 11-10-2018 AMS64_19335 c072177756622f61a1ec049be92adfc0 270 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AMS64_19335 c072177756622f61a1ec049be92adfc0 270 SMART SM00650 25 198 1.2E-82 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AMS64_19335 c072177756622f61a1ec049be92adfc0 270 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 265 3.2E-75 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMS64_19335 c072177756622f61a1ec049be92adfc0 270 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 264 5.3E-86 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMS64_19335 c072177756622f61a1ec049be92adfc0 270 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.237 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMS64_19335 c072177756622f61a1ec049be92adfc0 270 Gene3D G3DSA:1.10.8.100 201 265 2.6E-22 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AMS64_19335 c072177756622f61a1ec049be92adfc0 270 Gene3D G3DSA:3.40.50.150 1 199 5.9E-65 T 11-10-2018 AMS64_19335 c072177756622f61a1ec049be92adfc0 270 SUPERFAMILY SSF53335 8 266 2.48E-76 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_15245 9204f37256ca978fac7f949bd8d56524 198 Gene3D G3DSA:3.40.50.10610 41 190 1.0E-33 T 11-10-2018 AMS64_15245 9204f37256ca978fac7f949bd8d56524 198 Pfam PF13036 Peptidoglycan-synthase activator LpoB 43 187 9.3E-52 T 11-10-2018 IPR014094 Penicillin-binding protein activator LpoB AMS64_15245 9204f37256ca978fac7f949bd8d56524 198 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 7 189 4.4E-65 T 11-10-2018 IPR014094 Penicillin-binding protein activator LpoB AMS64_18150 a5435279f7d0a65707b32c9c41453e0b 335 SMART SM01329 5 331 1.7E-191 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMS64_18150 a5435279f7d0a65707b32c9c41453e0b 335 SUPERFAMILY SSF53659 3 335 1.98E-130 T 11-10-2018 AMS64_18150 a5435279f7d0a65707b32c9c41453e0b 335 Gene3D G3DSA:3.40.718.10 1 335 1.4E-147 T 11-10-2018 AMS64_18150 a5435279f7d0a65707b32c9c41453e0b 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 331 1.6E-111 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMS64_18150 a5435279f7d0a65707b32c9c41453e0b 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 44.533 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 3.4E-45 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 3.4E-45 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 3.4E-45 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 3.4E-45 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 3.4E-45 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 3.4E-45 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 Gene3D G3DSA:3.75.10.10 6 403 1.3E-151 T 11-10-2018 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 SUPERFAMILY SSF55909 3 405 1.86E-128 T 11-10-2018 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 Gene3D G3DSA:1.10.3930.10 68 148 1.3E-151 T 11-10-2018 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 Pfam PF02274 Amidinotransferase 18 403 6.6E-109 T 11-10-2018 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 PIRSF PIRSF006356 1 406 5.9E-152 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMS64_22255 4cbeaa978c787377c159b82ca1fcb932 406 TIGRFAM TIGR01078 arcA: arginine deiminase 5 406 4.5E-162 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMS64_10060 ef2c33714825aa2e2afba169a9d4f050 407 PIRSF PIRSF003180 1 403 3.3E-148 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AMS64_10060 ef2c33714825aa2e2afba169a9d4f050 407 Pfam PF08668 HDOD domain 202 319 2.6E-13 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AMS64_10060 ef2c33714825aa2e2afba169a9d4f050 407 Gene3D G3DSA:3.20.20.450 3 196 1.3E-21 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_10060 ef2c33714825aa2e2afba169a9d4f050 407 SUPERFAMILY SSF141868 4 201 7.85E-32 T 11-10-2018 IPR035919 EAL domain superfamily AMS64_10060 ef2c33714825aa2e2afba169a9d4f050 407 SMART SM00052 1 195 5.4E-5 T 11-10-2018 IPR001633 EAL domain AMS64_10060 ef2c33714825aa2e2afba169a9d4f050 407 Gene3D G3DSA:1.10.3210.10 197 337 3.5E-21 T 11-10-2018 AMS64_10060 ef2c33714825aa2e2afba169a9d4f050 407 Pfam PF00563 EAL domain 40 190 1.2E-17 T 11-10-2018 IPR001633 EAL domain AMS64_10060 ef2c33714825aa2e2afba169a9d4f050 407 SUPERFAMILY SSF109604 181 398 2.64E-39 T 11-10-2018 AMS64_02660 692a5d789921235004eeac14644ec345 351 Pfam PF13609 Gram-negative porin 6 325 5.7E-31 T 11-10-2018 AMS64_02660 692a5d789921235004eeac14644ec345 351 Gene3D G3DSA:2.40.160.10 20 351 2.1E-80 T 11-10-2018 IPR023614 Porin domain superfamily AMS64_02660 692a5d789921235004eeac14644ec345 351 SUPERFAMILY SSF56935 20 351 8.55E-53 T 11-10-2018 AMS64_15455 79ff25ac2ab220cb2efffb58be60e2c7 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 43.543 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AMS64_15455 79ff25ac2ab220cb2efffb58be60e2c7 208 SUPERFAMILY SSF53271 3 206 1.11E-65 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMS64_15455 79ff25ac2ab220cb2efffb58be60e2c7 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 1.1E-88 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AMS64_15455 79ff25ac2ab220cb2efffb58be60e2c7 208 Gene3D G3DSA:3.40.50.2020 1 208 2.3E-71 T 11-10-2018 AMS64_15455 79ff25ac2ab220cb2efffb58be60e2c7 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 2.0E-62 T 11-10-2018 AMS64_17950 c3e175fd133ecf4f26d91eb7d9473004 316 Hamap MF_00492 Transaldolase [tal]. 2 316 52.126 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMS64_17950 c3e175fd133ecf4f26d91eb7d9473004 316 Gene3D G3DSA:3.20.20.70 2 316 5.0E-141 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_17950 c3e175fd133ecf4f26d91eb7d9473004 316 SUPERFAMILY SSF51569 1 315 2.72E-115 T 11-10-2018 AMS64_17950 c3e175fd133ecf4f26d91eb7d9473004 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMS64_17950 c3e175fd133ecf4f26d91eb7d9473004 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMS64_17950 c3e175fd133ecf4f26d91eb7d9473004 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 311 9.4E-102 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMS64_17950 c3e175fd133ecf4f26d91eb7d9473004 316 TIGRFAM TIGR00874 talAB: transaldolase 4 315 2.4E-158 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMS64_19530 ba66776bce0c77fe62a879d1eab4a44e 200 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 36 168 1.6E-15 T 11-10-2018 AMS64_19530 ba66776bce0c77fe62a879d1eab4a44e 200 Gene3D G3DSA:3.40.50.720 1 199 2.4E-45 T 11-10-2018 AMS64_19530 ba66776bce0c77fe62a879d1eab4a44e 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 4.5E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_19530 ba66776bce0c77fe62a879d1eab4a44e 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.5E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_19530 ba66776bce0c77fe62a879d1eab4a44e 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 4.5E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_19530 ba66776bce0c77fe62a879d1eab4a44e 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 4.5E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_19530 ba66776bce0c77fe62a879d1eab4a44e 200 SUPERFAMILY SSF51735 1 200 4.38E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_17660 cbd559b80dbcd96b0d3d64e7821fe6c8 181 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 181 6.7E-62 T 11-10-2018 IPR010275 Protein of unknown function DUF882 AMS64_17660 cbd559b80dbcd96b0d3d64e7821fe6c8 181 SUPERFAMILY SSF55166 65 181 5.49E-32 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMS64_17660 cbd559b80dbcd96b0d3d64e7821fe6c8 181 Gene3D G3DSA:3.30.1380.10 65 181 1.0E-10 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMS64_07060 05740a4b6a196b841d0e95a4040482d3 87 Pfam PF10048 Predicted integral membrane protein (DUF2282) 34 84 7.1E-22 T 11-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane AMS64_15265 991f4f3786d103d6e585117e5ca40d34 600 Pfam PF02355 Protein export membrane protein 419 585 1.9E-20 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMS64_15265 991f4f3786d103d6e585117e5ca40d34 600 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 10 600 44.248 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMS64_15265 991f4f3786d103d6e585117e5ca40d34 600 Pfam PF13721 SecD export protein N-terminal TM region 9 95 1.2E-11 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain AMS64_15265 991f4f3786d103d6e585117e5ca40d34 600 Gene3D G3DSA:3.30.70.3400 211 289 1.1E-14 T 11-10-2018 AMS64_15265 991f4f3786d103d6e585117e5ca40d34 600 Gene3D G3DSA:3.30.70.3400 124 201 2.2E-7 T 11-10-2018 AMS64_15265 991f4f3786d103d6e585117e5ca40d34 600 Gene3D G3DSA:3.30.1360.200 290 411 5.6E-23 T 11-10-2018 AMS64_15265 991f4f3786d103d6e585117e5ca40d34 600 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 336 579 3.0E-68 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMS64_15265 991f4f3786d103d6e585117e5ca40d34 600 Pfam PF07549 SecD/SecF GG Motif 120 140 2.4E-4 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMS64_15265 991f4f3786d103d6e585117e5ca40d34 600 SUPERFAMILY SSF82866 395 591 3.27E-37 T 11-10-2018 AMS64_15265 991f4f3786d103d6e585117e5ca40d34 600 Gene3D G3DSA:1.20.1640.10 412 592 1.3E-7 T 11-10-2018 AMS64_15265 991f4f3786d103d6e585117e5ca40d34 600 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 124 586 1.4E-113 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMS64_00175 98b0a822e6442ebde3c983a4c70d8812 396 Pfam PF07690 Major Facilitator Superfamily 22 331 5.0E-23 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_00175 98b0a822e6442ebde3c983a4c70d8812 396 Gene3D G3DSA:1.20.1250.20 2 388 1.4E-38 T 11-10-2018 AMS64_00175 98b0a822e6442ebde3c983a4c70d8812 396 SUPERFAMILY SSF103473 8 386 1.1E-45 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_18380 ea46c51c275ff2a09645cd1f427397eb 384 Gene3D G3DSA:3.30.1660.40 20 108 2.3E-16 T 11-10-2018 IPR038180 FlgT, N-terminal domain superfamily AMS64_18380 ea46c51c275ff2a09645cd1f427397eb 384 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 310 382 1.4E-19 T 11-10-2018 IPR032388 Flagellar assembly protein T, C-terminal AMS64_18380 ea46c51c275ff2a09645cd1f427397eb 384 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 20 105 5.4E-20 T 11-10-2018 IPR032370 Flagellar assembly protein T, N-terminal AMS64_18380 ea46c51c275ff2a09645cd1f427397eb 384 Gene3D G3DSA:3.40.50.10610 110 298 1.0E-42 T 11-10-2018 AMS64_18380 ea46c51c275ff2a09645cd1f427397eb 384 Gene3D G3DSA:2.40.10.410 300 384 2.1E-15 T 11-10-2018 IPR038165 FlgT, C-terminal domain superfamily AMS64_18380 ea46c51c275ff2a09645cd1f427397eb 384 Pfam PF16539 Flagellar assembly protein T, middle domain 110 263 1.2E-39 T 11-10-2018 IPR032386 Flagellar assembly protein T, middle domain AMS64_19025 016f89e01817581025e4d26105fe37e3 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.5E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_19025 016f89e01817581025e4d26105fe37e3 290 SUPERFAMILY SSF53850 92 287 1.76E-46 T 11-10-2018 AMS64_19025 016f89e01817581025e4d26105fe37e3 290 SUPERFAMILY SSF46785 5 89 2.25E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_19025 016f89e01817581025e4d26105fe37e3 290 Gene3D G3DSA:1.10.10.10 4 91 2.1E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_19025 016f89e01817581025e4d26105fe37e3 290 Gene3D G3DSA:3.40.190.290 93 286 9.6E-61 T 11-10-2018 AMS64_19025 016f89e01817581025e4d26105fe37e3 290 Pfam PF03466 LysR substrate binding domain 91 287 1.8E-45 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_19025 016f89e01817581025e4d26105fe37e3 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_19025 016f89e01817581025e4d26105fe37e3 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_19025 016f89e01817581025e4d26105fe37e3 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_09370 bf87918f35126bd0fa19c504aeb46396 549 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 199 349 2.1E-20 T 11-10-2018 IPR000160 GGDEF domain AMS64_09370 bf87918f35126bd0fa19c504aeb46396 549 Pfam PF00990 Diguanylate cyclase, GGDEF domain 201 345 6.0E-28 T 11-10-2018 IPR000160 GGDEF domain AMS64_09370 bf87918f35126bd0fa19c504aeb46396 549 SUPERFAMILY SSF55073 206 353 6.83E-26 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_09370 bf87918f35126bd0fa19c504aeb46396 549 SMART SM00267 190 352 4.3E-22 T 11-10-2018 IPR000160 GGDEF domain AMS64_09370 bf87918f35126bd0fa19c504aeb46396 549 Gene3D G3DSA:3.30.70.270 197 368 5.6E-34 T 11-10-2018 AMS64_00395 9eb8751e4332475e44e40c1e4b2a585c 319 Gene3D G3DSA:1.10.10.60 207 315 1.8E-24 T 11-10-2018 AMS64_00395 9eb8751e4332475e44e40c1e4b2a585c 319 SUPERFAMILY SSF52317 6 193 3.93E-41 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_00395 9eb8751e4332475e44e40c1e4b2a585c 319 Pfam PF12833 Helix-turn-helix domain 234 312 9.0E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_00395 9eb8751e4332475e44e40c1e4b2a585c 319 SMART SM00342 228 311 4.6E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_00395 9eb8751e4332475e44e40c1e4b2a585c 319 Pfam PF01965 DJ-1/PfpI family 69 172 3.9E-7 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMS64_00395 9eb8751e4332475e44e40c1e4b2a585c 319 Gene3D G3DSA:3.40.50.880 5 206 2.7E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_00395 9eb8751e4332475e44e40c1e4b2a585c 319 SUPERFAMILY SSF46689 212 261 1.98E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_00395 9eb8751e4332475e44e40c1e4b2a585c 319 SUPERFAMILY SSF46689 265 315 2.69E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_20215 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 SUPERFAMILY SSF46785 2 85 2.3E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_20215 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 SUPERFAMILY SSF53850 90 287 7.14E-23 T 11-10-2018 AMS64_20215 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 Gene3D G3DSA:3.40.190.10 169 265 3.0E-6 T 11-10-2018 AMS64_20215 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.2E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_20215 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 Gene3D G3DSA:1.10.10.10 3 93 1.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_20215 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 Gene3D G3DSA:3.40.190.10 97 280 3.0E-6 T 11-10-2018 AMS64_20215 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 Pfam PF03466 LysR substrate binding domain 97 286 4.3E-11 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_10670 6ed859e2162cdcd0a751f4e0f4e43c75 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMS64_10670 6ed859e2162cdcd0a751f4e0f4e43c75 260 Gene3D G3DSA:3.90.226.10 1 256 9.9E-78 T 11-10-2018 AMS64_10670 6ed859e2162cdcd0a751f4e0f4e43c75 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 255 2.7E-53 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMS64_10670 6ed859e2162cdcd0a751f4e0f4e43c75 260 SUPERFAMILY SSF52096 2 255 2.16E-76 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_20655 56d834f49156bd01c4aab96f2763ba48 191 Gene3D G3DSA:3.40.50.1820 1 170 3.6E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_20655 56d834f49156bd01c4aab96f2763ba48 191 SUPERFAMILY SSF53474 2 162 2.49E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_20655 56d834f49156bd01c4aab96f2763ba48 191 Pfam PF06821 Serine hydrolase 4 164 1.5E-52 T 11-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 AMS64_02255 60475e9d95baf2be79c91c864bedf043 422 SUPERFAMILY SSF53383 1 421 2.24E-127 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_02255 60475e9d95baf2be79c91c864bedf043 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 4 421 5.9E-197 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 AMS64_02255 60475e9d95baf2be79c91c864bedf043 422 PIRSF PIRSF001434 1 422 1.0E-130 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMS64_02255 60475e9d95baf2be79c91c864bedf043 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMS64_02255 60475e9d95baf2be79c91c864bedf043 422 Gene3D G3DSA:3.90.1150.10 289 422 2.4E-52 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_02255 60475e9d95baf2be79c91c864bedf043 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 421 1.8E-138 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMS64_02255 60475e9d95baf2be79c91c864bedf043 422 Gene3D G3DSA:3.40.640.10 1 285 3.2E-101 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_01400 8b5a5d40ad50d659c4a53a0a474c7af0 357 Gene3D G3DSA:3.40.50.2000 37 180 1.8E-6 T 11-10-2018 AMS64_01400 8b5a5d40ad50d659c4a53a0a474c7af0 357 Gene3D G3DSA:3.40.50.2000 194 353 7.6E-16 T 11-10-2018 AMS64_01400 8b5a5d40ad50d659c4a53a0a474c7af0 357 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 163 335 9.1E-10 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AMS64_01400 8b5a5d40ad50d659c4a53a0a474c7af0 357 SUPERFAMILY SSF53756 39 353 5.65E-42 T 11-10-2018 AMS64_09830 880af8cb528df25d385a835d67d7e6c4 55 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.4E-19 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09830 880af8cb528df25d385a835d67d7e6c4 55 SUPERFAMILY SSF57829 2 54 5.62E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMS64_09830 880af8cb528df25d385a835d67d7e6c4 55 Pfam PF01783 Ribosomal L32p protein family 2 54 6.8E-19 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09830 880af8cb528df25d385a835d67d7e6c4 55 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.594 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_06365 501a557eb5aed499f43fc2975259271a 157 Pfam PF13488 Glycine zipper 83 123 2.2E-5 T 11-10-2018 IPR039567 Glycine zipper domain AMS64_20010 36cb903849ef3677d8a20c89704a7f15 246 SUPERFAMILY SSF52343 102 246 2.49E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_20010 36cb903849ef3677d8a20c89704a7f15 246 SUPERFAMILY SSF63380 2 98 4.48E-20 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_20010 36cb903849ef3677d8a20c89704a7f15 246 Gene3D G3DSA:2.40.30.10 1 95 2.4E-25 T 11-10-2018 AMS64_20010 36cb903849ef3677d8a20c89704a7f15 246 Pfam PF00175 Oxidoreductase NAD-binding domain 110 221 4.3E-15 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMS64_20010 36cb903849ef3677d8a20c89704a7f15 246 Gene3D G3DSA:3.40.50.80 96 246 9.3E-40 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_09860 d292970452659aeecd10381f5c644114 574 Pfam PF02378 Phosphotransferase system, EIIC 244 507 1.5E-17 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMS64_09860 d292970452659aeecd10381f5c644114 574 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 227 563 1.0E-140 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AMS64_09860 d292970452659aeecd10381f5c644114 574 Gene3D G3DSA:3.40.50.2300 1 103 1.3E-18 T 11-10-2018 AMS64_09860 d292970452659aeecd10381f5c644114 574 SUPERFAMILY SSF52794 4 102 1.96E-22 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AMS64_09860 d292970452659aeecd10381f5c644114 574 SUPERFAMILY SSF52794 120 221 2.79E-37 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AMS64_09860 d292970452659aeecd10381f5c644114 574 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 122 205 1.7E-38 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AMS64_09860 d292970452659aeecd10381f5c644114 574 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 5.5E-11 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMS64_09860 d292970452659aeecd10381f5c644114 574 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 123 209 2.4E-19 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMS64_09860 d292970452659aeecd10381f5c644114 574 Gene3D G3DSA:3.40.50.2300 111 220 5.1E-40 T 11-10-2018 AMS64_16330 ad89866cfd4ee7696dece7f0545cd5a1 210 PIRSF PIRSF006324 5 210 2.3E-42 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMS64_16330 ad89866cfd4ee7696dece7f0545cd5a1 210 Pfam PF01810 LysE type translocator 19 209 3.1E-20 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMS64_07320 f0ce44efcdebb831eda60a7b11e36e85 171 Pfam PF03748 Flagellar basal body-associated protein FliL 70 171 6.6E-21 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AMS64_03870 36291048c598dfe87182ffb4eea2448d 309 Gene3D G3DSA:3.20.20.120 92 286 2.2E-82 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMS64_03870 36291048c598dfe87182ffb4eea2448d 309 SUPERFAMILY SSF51604 93 292 5.76E-44 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMS64_03870 36291048c598dfe87182ffb4eea2448d 309 SUPERFAMILY SSF54826 1 89 3.22E-19 T 11-10-2018 AMS64_03870 36291048c598dfe87182ffb4eea2448d 309 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 3 306 22.361 T 11-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 AMS64_03870 36291048c598dfe87182ffb4eea2448d 309 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 6 285 2.8E-59 T 11-10-2018 AMS64_03870 36291048c598dfe87182ffb4eea2448d 309 Gene3D G3DSA:3.30.390.10 4 288 2.2E-82 T 11-10-2018 IPR029017 Enolase-like, N-terminal AMS64_03870 36291048c598dfe87182ffb4eea2448d 309 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 153 184 - T 11-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AMS64_03870 36291048c598dfe87182ffb4eea2448d 309 Pfam PF13378 Enolase C-terminal domain-like 113 270 1.2E-16 T 11-10-2018 IPR029065 Enolase C-terminal domain-like AMS64_03870 36291048c598dfe87182ffb4eea2448d 309 SMART SM00922 107 201 1.3E-8 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMS64_11310 8993a3ed2c1f71c032c0a133626f58b2 588 PIRSF PIRSF028304 1 588 6.9E-182 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AMS64_11310 8993a3ed2c1f71c032c0a133626f58b2 588 Pfam PF05947 Type VI secretion system, TssF 5 586 1.2E-195 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AMS64_11310 8993a3ed2c1f71c032c0a133626f58b2 588 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 3 588 1.5E-204 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AMS64_18485 0eee56a4b388cce51fee945e4d781f0b 542 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 46 225 9.2E-8 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AMS64_18485 0eee56a4b388cce51fee945e4d781f0b 542 SUPERFAMILY SSF52402 36 225 1.55E-18 T 11-10-2018 AMS64_18485 0eee56a4b388cce51fee945e4d781f0b 542 TIGRFAM TIGR03183 DNA_S_dndC: putative sulfurtransferase DndC 32 485 6.1E-163 T 11-10-2018 IPR017598 Sulphur transferase DndC, putative AMS64_08115 7215ea723e6c8a3f1d52e3756f0c5f59 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 395 406 3.1E-17 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMS64_08115 7215ea723e6c8a3f1d52e3756f0c5f59 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 3.1E-17 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMS64_08115 7215ea723e6c8a3f1d52e3756f0c5f59 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 3.1E-17 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMS64_08115 7215ea723e6c8a3f1d52e3756f0c5f59 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 374 382 3.1E-17 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMS64_08115 7215ea723e6c8a3f1d52e3756f0c5f59 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 3.1E-17 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMS64_08115 7215ea723e6c8a3f1d52e3756f0c5f59 477 Pfam PF00232 Glycosyl hydrolase family 1 7 474 1.5E-172 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMS64_08115 7215ea723e6c8a3f1d52e3756f0c5f59 477 Gene3D G3DSA:3.20.20.80 1 477 6.8E-179 T 11-10-2018 AMS64_08115 7215ea723e6c8a3f1d52e3756f0c5f59 477 SUPERFAMILY SSF51445 8 475 9.53E-170 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_08115 7215ea723e6c8a3f1d52e3756f0c5f59 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 11-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMS64_08375 fbee03ae78891150125824b81817c79a 400 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_08375 fbee03ae78891150125824b81817c79a 400 Pfam PF02754 Cysteine-rich domain 297 380 6.4E-12 T 11-10-2018 IPR004017 Cysteine-rich domain AMS64_08375 fbee03ae78891150125824b81817c79a 400 Pfam PF02754 Cysteine-rich domain 167 253 4.2E-15 T 11-10-2018 IPR004017 Cysteine-rich domain AMS64_08375 fbee03ae78891150125824b81817c79a 400 Gene3D G3DSA:1.10.1060.10 3 90 1.5E-8 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_08375 fbee03ae78891150125824b81817c79a 400 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 7 399 1.3E-227 T 11-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 AMS64_08375 fbee03ae78891150125824b81817c79a 400 SUPERFAMILY SSF46548 10 86 2.62E-15 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_08375 fbee03ae78891150125824b81817c79a 400 Pfam PF13183 4Fe-4S dicluster domain 10 74 2.7E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_11585 7de0c8ac36f3d138e2ed59a53e1ac35c 216 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 8.3E-58 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AMS64_11585 7de0c8ac36f3d138e2ed59a53e1ac35c 216 Gene3D G3DSA:1.25.40.10 31 210 8.0E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_11585 7de0c8ac36f3d138e2ed59a53e1ac35c 216 PIRSF PIRSF006170 1 208 8.7E-53 T 11-10-2018 IPR026039 Uncharacterised protein family UPF0070 AMS64_11585 7de0c8ac36f3d138e2ed59a53e1ac35c 216 SUPERFAMILY SSF48452 91 186 1.84E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_18465 7121061b2fdbfd394bdf5eb5b8133acf 97 Gene3D G3DSA:1.10.10.60 9 89 2.8E-8 T 11-10-2018 AMS64_18465 7121061b2fdbfd394bdf5eb5b8133acf 97 SUPERFAMILY SSF46689 5 90 9.32E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_18465 7121061b2fdbfd394bdf5eb5b8133acf 97 Pfam PF01527 Transposase 5 76 7.9E-16 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMS64_04260 7121061b2fdbfd394bdf5eb5b8133acf 97 Gene3D G3DSA:1.10.10.60 9 89 2.8E-8 T 11-10-2018 AMS64_04260 7121061b2fdbfd394bdf5eb5b8133acf 97 SUPERFAMILY SSF46689 5 90 9.32E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_04260 7121061b2fdbfd394bdf5eb5b8133acf 97 Pfam PF01527 Transposase 5 76 7.9E-16 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMS64_14215 7121061b2fdbfd394bdf5eb5b8133acf 97 Gene3D G3DSA:1.10.10.60 9 89 2.8E-8 T 11-10-2018 AMS64_14215 7121061b2fdbfd394bdf5eb5b8133acf 97 SUPERFAMILY SSF46689 5 90 9.32E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_14215 7121061b2fdbfd394bdf5eb5b8133acf 97 Pfam PF01527 Transposase 5 76 7.9E-16 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 SMART SM00981 68 166 9.4E-22 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 Gene3D G3DSA:3.30.750.80 415 506 3.5E-36 T 11-10-2018 AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 Gene3D G3DSA:3.40.50.150 507 725 1.4E-76 T 11-10-2018 AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 Pfam PF01170 Putative RNA methylase family UPF0020 174 399 1.7E-49 T 11-10-2018 IPR000241 Putative RNA methylase domain AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 Gene3D G3DSA:3.30.2130.30 17 266 2.8E-139 T 11-10-2018 AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 455 686 2.6E-27 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 330 336 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 Gene3D G3DSA:3.40.50.150 181 396 2.8E-139 T 11-10-2018 AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 SUPERFAMILY SSF53335 152 398 2.36E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 Pfam PF02926 THUMP domain 43 165 7.8E-11 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 16 725 33.344 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 SUPERFAMILY SSF53335 418 724 3.23E-70 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 PIRSF PIRSF037618 11 726 0.0 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AMS64_09555 d3d59059db6050b9a6c1e899dd541969 731 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 206 217 - T 11-10-2018 IPR000241 Putative RNA methylase domain AMS64_01200 182b3652520e87c9c3c372f42e34d9db 344 Gene3D G3DSA:3.40.50.2000 163 344 2.6E-56 T 11-10-2018 AMS64_01200 182b3652520e87c9c3c372f42e34d9db 344 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 341 1.3E-148 T 11-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 AMS64_01200 182b3652520e87c9c3c372f42e34d9db 344 Gene3D G3DSA:3.40.50.2000 1 150 6.3E-55 T 11-10-2018 AMS64_01200 182b3652520e87c9c3c372f42e34d9db 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 322 6.8E-72 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AMS64_01200 182b3652520e87c9c3c372f42e34d9db 344 SUPERFAMILY SSF53756 1 340 5.89E-100 T 11-10-2018 AMS64_00920 ba300b170b879ead74576861f563d1d8 481 SMART SM00387 377 481 4.6E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00920 ba300b170b879ead74576861f563d1d8 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 480 1.0E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_00920 ba300b170b879ead74576861f563d1d8 481 SUPERFAMILY SSF47384 264 326 1.22E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_00920 ba300b170b879ead74576861f563d1d8 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00920 ba300b170b879ead74576861f563d1d8 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00920 ba300b170b879ead74576861f563d1d8 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00920 ba300b170b879ead74576861f563d1d8 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_00920 ba300b170b879ead74576861f563d1d8 481 Pfam PF00672 HAMP domain 227 276 2.6E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_00920 ba300b170b879ead74576861f563d1d8 481 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 334 2.3E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_00920 ba300b170b879ead74576861f563d1d8 481 Gene3D G3DSA:3.30.565.10 341 481 1.2E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_00920 ba300b170b879ead74576861f563d1d8 481 SMART SM00304 227 279 4.5E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_00920 ba300b170b879ead74576861f563d1d8 481 SMART SM00388 280 338 6.3E-5 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_00920 ba300b170b879ead74576861f563d1d8 481 Gene3D G3DSA:1.10.287.130 231 337 1.6E-16 T 11-10-2018 AMS64_00920 ba300b170b879ead74576861f563d1d8 481 SUPERFAMILY SSF55874 338 480 9.82E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_13905 3be60d71bfdc8ebf2341235a18f8f5be 71 Pfam PF01527 Transposase 20 54 7.1E-6 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMS64_05495 78d05523640399f0447f15ab36d76298 236 SUPERFAMILY SSF57863 82 207 1.1E-11 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger AMS64_05495 78d05523640399f0447f15ab36d76298 236 Pfam PF02565 Recombination protein O C terminal 81 225 5.1E-23 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMS64_05495 78d05523640399f0447f15ab36d76298 236 SUPERFAMILY SSF50249 3 72 1.1E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_05495 78d05523640399f0447f15ab36d76298 236 Gene3D G3DSA:2.40.50.140 2 74 2.9E-30 T 11-10-2018 AMS64_05495 78d05523640399f0447f15ab36d76298 236 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 227 6.2E-29 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMS64_05495 78d05523640399f0447f15ab36d76298 236 Gene3D G3DSA:1.20.1440.120 77 235 7.4E-47 T 11-10-2018 AMS64_05495 78d05523640399f0447f15ab36d76298 236 Pfam PF11967 Recombination protein O N terminal 3 72 2.4E-23 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AMS64_05495 78d05523640399f0447f15ab36d76298 236 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 21.507 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMS64_16320 48b8606e69c8115c4123ed926bdf6560 367 SUPERFAMILY SSF51445 16 321 2.32E-86 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_16320 48b8606e69c8115c4123ed926bdf6560 367 Pfam PF07555 beta-N-acetylglucosaminidase 18 307 1.6E-55 T 11-10-2018 IPR011496 Beta-N-acetylglucosaminidase MetaCyc: PWY-7437 AMS64_16320 48b8606e69c8115c4123ed926bdf6560 367 Gene3D G3DSA:3.20.20.80 14 315 5.5E-73 T 11-10-2018 AMS64_16235 6bb898467f8b7b7a94da82a9c061c055 290 Gene3D G3DSA:3.30.2010.10 68 161 8.1E-36 T 11-10-2018 AMS64_16235 6bb898467f8b7b7a94da82a9c061c055 290 Pfam PF01435 Peptidase family M48 78 289 3.2E-39 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMS64_16235 6bb898467f8b7b7a94da82a9c061c055 290 Hamap MF_00188 Protease HtpX [htpX]. 1 290 25.267 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AMS64_14700 72ab1e90f4043a8ade0e9a196519f6d5 246 SUPERFAMILY SSF161098 11 227 4.45E-41 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_14700 72ab1e90f4043a8ade0e9a196519f6d5 246 Gene3D G3DSA:1.10.3720.10 3 243 2.6E-51 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_14700 72ab1e90f4043a8ade0e9a196519f6d5 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 74 3.3E-16 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMS64_14700 72ab1e90f4043a8ade0e9a196519f6d5 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 238 5.1E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_15725 cc5db2650b76a3296986730c952ef367 473 Gene3D G3DSA:3.40.50.300 116 300 2.0E-66 T 11-10-2018 AMS64_15725 cc5db2650b76a3296986730c952ef367 473 Gene3D G3DSA:1.10.10.60 408 471 3.2E-14 T 11-10-2018 AMS64_15725 cc5db2650b76a3296986730c952ef367 473 SUPERFAMILY SSF46689 341 469 5.82E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_15725 cc5db2650b76a3296986730c952ef367 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 4.9E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_15725 cc5db2650b76a3296986730c952ef367 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 4.9E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_15725 cc5db2650b76a3296986730c952ef367 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMS64_15725 cc5db2650b76a3296986730c952ef367 473 Pfam PF02954 Bacterial regulatory protein, Fis family 427 467 5.3E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_15725 cc5db2650b76a3296986730c952ef367 473 Pfam PF00158 Sigma-54 interaction domain 129 296 2.7E-72 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_15725 cc5db2650b76a3296986730c952ef367 473 SUPERFAMILY SSF52172 3 171 4.97E-6 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_15725 cc5db2650b76a3296986730c952ef367 473 SMART SM00382 149 293 2.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_15725 cc5db2650b76a3296986730c952ef367 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMS64_15725 cc5db2650b76a3296986730c952ef367 473 SUPERFAMILY SSF52540 129 370 5.43E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_15725 cc5db2650b76a3296986730c952ef367 473 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 153 166 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMS64_15725 cc5db2650b76a3296986730c952ef367 473 Pfam PF06490 Flagellar regulatory protein FleQ 6 108 3.3E-16 T 11-10-2018 IPR010518 Flagellar regulatory FleQ AMS64_15725 cc5db2650b76a3296986730c952ef367 473 Gene3D G3DSA:1.10.8.60 301 376 1.4E-24 T 11-10-2018 AMS64_09570 44e15cfaa4f05f7756a0d517254318c6 186 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 16 186 52.638 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_09570 44e15cfaa4f05f7756a0d517254318c6 186 Gene3D G3DSA:3.10.129.10 17 186 6.0E-67 T 11-10-2018 AMS64_09570 44e15cfaa4f05f7756a0d517254318c6 186 Pfam PF07977 FabA-like domain 43 172 1.0E-52 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_09570 44e15cfaa4f05f7756a0d517254318c6 186 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 19 185 1.6E-95 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMS64_09570 44e15cfaa4f05f7756a0d517254318c6 186 SUPERFAMILY SSF54637 18 183 1.7E-58 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_07495 09e283a5aa77a265cc591d5b2cb5431a 443 Pfam PF01490 Transmembrane amino acid transporter protein 28 440 9.1E-9 T 11-10-2018 IPR013057 Amino acid transporter, transmembrane domain AMS64_07495 09e283a5aa77a265cc591d5b2cb5431a 443 TIGRFAM TIGR00814 stp: serine transporter 17 433 2.3E-163 T 11-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 AMS64_07495 09e283a5aa77a265cc591d5b2cb5431a 443 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 443 49.398 T 11-10-2018 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 AMS64_14650 9dfae84a2290c52d050959528531fdb6 122 SUPERFAMILY SSF51182 18 117 3.41E-25 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_14650 9dfae84a2290c52d050959528531fdb6 122 Pfam PF05899 Protein of unknown function (DUF861) 42 114 1.5E-19 T 11-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AMS64_14650 9dfae84a2290c52d050959528531fdb6 122 Gene3D G3DSA:2.60.120.10 18 118 1.0E-29 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_07970 ae6b7e627552190534d05f7baf040ecd 342 Gene3D G3DSA:1.10.8.60 180 263 4.5E-26 T 11-10-2018 AMS64_07970 ae6b7e627552190534d05f7baf040ecd 342 Gene3D G3DSA:3.40.50.300 1 179 3.6E-59 T 11-10-2018 AMS64_07970 ae6b7e627552190534d05f7baf040ecd 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 313 333 7.7E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_07970 ae6b7e627552190534d05f7baf040ecd 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 313 7.7E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMS64_07970 ae6b7e627552190534d05f7baf040ecd 342 SUPERFAMILY SSF46689 279 332 7.17E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_07970 ae6b7e627552190534d05f7baf040ecd 342 SUPERFAMILY SSF52540 8 245 1.82E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07970 ae6b7e627552190534d05f7baf040ecd 342 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 330 2.5E-162 T 11-10-2018 IPR014317 Transcription activator PspF AMS64_07970 ae6b7e627552190534d05f7baf040ecd 342 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMS64_07970 ae6b7e627552190534d05f7baf040ecd 342 Gene3D G3DSA:1.10.10.60 264 333 6.8E-9 T 11-10-2018 AMS64_07970 ae6b7e627552190534d05f7baf040ecd 342 SMART SM00382 28 175 2.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_07970 ae6b7e627552190534d05f7baf040ecd 342 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMS64_07970 ae6b7e627552190534d05f7baf040ecd 342 Pfam PF00158 Sigma-54 interaction domain 8 171 1.5E-60 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMS64_12830 4d57a0bd796020ceec96d02a7aaee425 302 SUPERFAMILY SSF53850 93 298 7.29E-37 T 11-10-2018 AMS64_12830 4d57a0bd796020ceec96d02a7aaee425 302 Pfam PF03466 LysR substrate binding domain 93 295 1.7E-39 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_12830 4d57a0bd796020ceec96d02a7aaee425 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12830 4d57a0bd796020ceec96d02a7aaee425 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12830 4d57a0bd796020ceec96d02a7aaee425 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12830 4d57a0bd796020ceec96d02a7aaee425 302 Gene3D G3DSA:3.40.190.10 95 295 3.3E-54 T 11-10-2018 AMS64_12830 4d57a0bd796020ceec96d02a7aaee425 302 SUPERFAMILY SSF46785 4 115 1.21E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_12830 4d57a0bd796020ceec96d02a7aaee425 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.7E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12830 4d57a0bd796020ceec96d02a7aaee425 302 Gene3D G3DSA:1.10.10.10 2 88 5.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_12830 4d57a0bd796020ceec96d02a7aaee425 302 Gene3D G3DSA:3.40.190.10 165 266 3.3E-54 T 11-10-2018 AMS64_05195 692171ea2b0bbfff8e66dc57d750da2f 253 SMART SM00849 48 230 4.4E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_05195 692171ea2b0bbfff8e66dc57d750da2f 253 ProSitePatterns PS00744 Beta-lactamases class B signature 2. 183 195 - T 11-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 AMS64_05195 692171ea2b0bbfff8e66dc57d750da2f 253 Pfam PF00753 Metallo-beta-lactamase superfamily 50 230 1.4E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_05195 692171ea2b0bbfff8e66dc57d750da2f 253 Gene3D G3DSA:3.60.15.10 27 253 1.2E-64 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_05195 692171ea2b0bbfff8e66dc57d750da2f 253 SUPERFAMILY SSF56281 29 251 7.42E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_05195 692171ea2b0bbfff8e66dc57d750da2f 253 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 91 110 - T 11-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 AMS64_02905 4fbdd32fd2e725e86c658404e97454e6 126 PIRSF PIRSF006318 1 126 1.4E-36 T 11-10-2018 IPR009386 Protein of unknown function DUF1043 AMS64_02905 4fbdd32fd2e725e86c658404e97454e6 126 Pfam PF06295 Protein of unknown function (DUF1043) 11 123 8.0E-29 T 11-10-2018 IPR009386 Protein of unknown function DUF1043 AMS64_02905 4fbdd32fd2e725e86c658404e97454e6 126 SUPERFAMILY SSF47170 31 92 3.01E-5 T 11-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AMS64_20595 f67d31390ba32691de904e6ea7f3fe28 797 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 7 796 1.1E-263 T 11-10-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:1901515 AMS64_20595 f67d31390ba32691de904e6ea7f3fe28 797 Gene3D G3DSA:1.25.40.10 283 500 6.3E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_20595 f67d31390ba32691de904e6ea7f3fe28 797 SUPERFAMILY SSF48452 82 462 6.1E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_20595 f67d31390ba32691de904e6ea7f3fe28 797 Gene3D G3DSA:1.25.40.10 31 196 2.4E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_16720 27eba8b1a739665b783824aa50330301 212 Gene3D G3DSA:1.10.357.10 1 207 6.0E-54 T 11-10-2018 AMS64_16720 27eba8b1a739665b783824aa50330301 212 SUPERFAMILY SSF46689 1 79 4.99E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_16720 27eba8b1a739665b783824aa50330301 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.1E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_16720 27eba8b1a739665b783824aa50330301 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.1E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_16720 27eba8b1a739665b783824aa50330301 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 3.8E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_16720 27eba8b1a739665b783824aa50330301 212 SUPERFAMILY SSF48498 84 202 9.69E-16 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMS64_16720 27eba8b1a739665b783824aa50330301 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMS64_16720 27eba8b1a739665b783824aa50330301 212 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 203 1.8E-18 T 11-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 AMS64_07625 cc51ac62fc1d876b9649ff6eccc0211c 905 Gene3D G3DSA:1.25.40.10 546 655 5.0E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_07625 cc51ac62fc1d876b9649ff6eccc0211c 905 Gene3D G3DSA:3.40.50.300 157 328 9.3E-14 T 11-10-2018 AMS64_07625 cc51ac62fc1d876b9649ff6eccc0211c 905 SUPERFAMILY SSF48452 557 631 2.73E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_07625 cc51ac62fc1d876b9649ff6eccc0211c 905 PRINTS PR00364 Disease resistance protein signature 278 292 2.0E-5 T 11-10-2018 AMS64_07625 cc51ac62fc1d876b9649ff6eccc0211c 905 PRINTS PR00364 Disease resistance protein signature 784 800 2.0E-5 T 11-10-2018 AMS64_07625 cc51ac62fc1d876b9649ff6eccc0211c 905 PRINTS PR00364 Disease resistance protein signature 191 206 2.0E-5 T 11-10-2018 AMS64_07625 cc51ac62fc1d876b9649ff6eccc0211c 905 SUPERFAMILY SSF52540 168 415 4.96E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_03720 b60a6f04c83373299ab700e0422153ea 555 Pfam PF03961 Flagellar Assembly Protein A 86 545 5.0E-121 T 11-10-2018 IPR005646 Flagellar assembly protein A AMS64_03720 b60a6f04c83373299ab700e0422153ea 555 SUPERFAMILY SSF63848 282 331 7.19E-6 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 AMS64_05465 4b35bbc02027a0769879230bf0082d3a 326 Pfam PF03888 MucB/RseB N-terminal domain 25 199 2.7E-52 T 11-10-2018 IPR033434 MucB/RseB, N-terminal AMS64_05465 4b35bbc02027a0769879230bf0082d3a 326 Pfam PF17188 MucB/RseB C-terminal domain 219 317 1.6E-30 T 11-10-2018 IPR033436 MucB/RseB, C-terminal AMS64_05465 4b35bbc02027a0769879230bf0082d3a 326 Gene3D G3DSA:2.50.20.10 24 208 1.1E-47 T 11-10-2018 AMS64_05465 4b35bbc02027a0769879230bf0082d3a 326 PIRSF PIRSF005427 1 323 3.6E-110 T 11-10-2018 IPR005588 MucB/RseB AMS64_05465 4b35bbc02027a0769879230bf0082d3a 326 Gene3D G3DSA:3.30.200.100 220 321 3.5E-30 T 11-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily AMS64_05585 5c0086aab1f59210819e729b1e98024e 413 Gene3D G3DSA:3.30.160.390 9 103 1.8E-12 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AMS64_05585 5c0086aab1f59210819e729b1e98024e 413 Gene3D G3DSA:1.10.150.130 104 211 1.5E-18 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_05585 5c0086aab1f59210819e729b1e98024e 413 Gene3D G3DSA:1.10.443.10 212 387 7.6E-35 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_05585 5c0086aab1f59210819e729b1e98024e 413 SUPERFAMILY SSF56349 116 379 2.85E-60 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_05585 5c0086aab1f59210819e729b1e98024e 413 Pfam PF00589 Phage integrase family 212 373 9.9E-23 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_05585 5c0086aab1f59210819e729b1e98024e 413 Pfam PF13356 Arm DNA-binding domain 10 102 1.9E-14 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 TIGRFAM TIGR00016 ackA: acetate kinase 5 392 1.7E-150 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 PRINTS PR00471 Acetate kinase family signature 318 334 1.6E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 PRINTS PR00471 Acetate kinase family signature 296 309 1.6E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 PRINTS PR00471 Acetate kinase family signature 374 386 1.6E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 PRINTS PR00471 Acetate kinase family signature 169 182 1.6E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 PRINTS PR00471 Acetate kinase family signature 199 220 1.6E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 PRINTS PR00471 Acetate kinase family signature 7 18 1.6E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 SUPERFAMILY SSF53067 153 392 7.21E-83 T 11-10-2018 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 Gene3D G3DSA:3.30.420.40 4 190 7.0E-69 T 11-10-2018 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 SUPERFAMILY SSF53067 6 188 7.77E-61 T 11-10-2018 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 Hamap MF_00020 Acetate kinase [ackA]. 1 397 158.199 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 Gene3D G3DSA:3.30.420.40 192 401 8.6E-79 T 11-10-2018 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 PIRSF PIRSF000722 3 396 1.3E-134 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_07500 ced00a4a32df7ad3c27a2654a0c6a909 402 Pfam PF00871 Acetokinase family 7 386 2.0E-143 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_11860 85e3ea5bea7f4f1eb8f4cca6ffac1a9d 172 Pfam PF14345 GDYXXLXY protein 18 157 5.4E-34 T 11-10-2018 IPR025833 GDYXXLXY protein AMS64_19045 6bfe864a6b0e6ac0b2a1c6a960aa09af 182 SUPERFAMILY SSF55469 1 181 1.7E-40 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMS64_19045 6bfe864a6b0e6ac0b2a1c6a960aa09af 182 Gene3D G3DSA:3.40.109.10 1 180 1.5E-40 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMS64_19045 6bfe864a6b0e6ac0b2a1c6a960aa09af 182 PIRSF PIRSF000232 1 182 3.6E-61 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AMS64_19045 6bfe864a6b0e6ac0b2a1c6a960aa09af 182 Pfam PF00881 Nitroreductase family 8 161 1.6E-24 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMS64_18870 405964700c21b2113d17e3bb9c4cd0df 324 Gene3D G3DSA:1.10.3720.10 84 314 7.8E-19 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_18870 405964700c21b2113d17e3bb9c4cd0df 324 SUPERFAMILY SSF161098 90 303 1.68E-15 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_18870 405964700c21b2113d17e3bb9c4cd0df 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 1.1E-38 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_03230 2f945df99714fd61ea49a744b7348f1f 451 Pfam PF08245 Mur ligase middle domain 105 289 5.0E-49 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMS64_03230 2f945df99714fd61ea49a744b7348f1f 451 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 443 34.78 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_03230 2f945df99714fd61ea49a744b7348f1f 451 Pfam PF01225 Mur ligase family, catalytic domain 23 73 1.3E-10 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMS64_03230 2f945df99714fd61ea49a744b7348f1f 451 Gene3D G3DSA:3.90.190.20 310 447 6.5E-39 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMS64_03230 2f945df99714fd61ea49a744b7348f1f 451 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 441 1.3E-139 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_03230 2f945df99714fd61ea49a744b7348f1f 451 SUPERFAMILY SSF53244 311 441 3.11E-33 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMS64_03230 2f945df99714fd61ea49a744b7348f1f 451 Gene3D G3DSA:3.40.1390.10 1 80 3.1E-27 T 11-10-2018 AMS64_03230 2f945df99714fd61ea49a744b7348f1f 451 SUPERFAMILY SSF63418 1 96 4.19E-25 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AMS64_03230 2f945df99714fd61ea49a744b7348f1f 451 SUPERFAMILY SSF53623 99 308 1.7E-55 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMS64_03230 2f945df99714fd61ea49a744b7348f1f 451 Gene3D G3DSA:3.40.1190.10 81 309 4.4E-78 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMS64_03230 2f945df99714fd61ea49a744b7348f1f 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 396 1.7E-12 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMS64_04265 daf0a9d02f2e28ff5d70decee5b86db8 361 Pfam PF01973 Protein of unknown function DUF115 129 283 1.4E-10 T 11-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like AMS64_08610 a59926a29467b1685e1584163ad17206 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 22 171 1.3E-27 T 11-10-2018 IPR006512 YidE/YbjL duplication AMS64_08610 a59926a29467b1685e1584163ad17206 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 543 1.3E-34 T 11-10-2018 IPR006512 YidE/YbjL duplication AMS64_08610 a59926a29467b1685e1584163ad17206 561 Pfam PF02080 TrkA-C domain 309 375 3.1E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMS64_08610 a59926a29467b1685e1584163ad17206 561 Pfam PF02080 TrkA-C domain 232 281 2.2E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMS64_08610 a59926a29467b1685e1584163ad17206 561 Pfam PF06826 Predicted Permease Membrane Region 17 184 2.0E-35 T 11-10-2018 IPR006512 YidE/YbjL duplication AMS64_08610 a59926a29467b1685e1584163ad17206 561 Pfam PF06826 Predicted Permease Membrane Region 389 556 4.3E-37 T 11-10-2018 IPR006512 YidE/YbjL duplication AMS64_08610 a59926a29467b1685e1584163ad17206 561 Gene3D G3DSA:3.30.70.1450 220 288 7.2E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_08610 a59926a29467b1685e1584163ad17206 561 SUPERFAMILY SSF116726 294 377 1.7E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_08610 a59926a29467b1685e1584163ad17206 561 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 58.633 T 11-10-2018 IPR023017 Transport protein YbjL, putative AMS64_08610 a59926a29467b1685e1584163ad17206 561 SUPERFAMILY SSF116726 230 285 3.01E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_08610 a59926a29467b1685e1584163ad17206 561 Gene3D G3DSA:3.30.70.1450 301 375 4.1E-5 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_00525 f3fd81c44c6633ffad6cb1b96db3e6bb 260 ProSitePatterns PS00449 ATP synthase a subunit signature. 194 203 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00525 f3fd81c44c6633ffad6cb1b96db3e6bb 260 Pfam PF00119 ATP synthase A chain 35 253 3.0E-56 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00525 f3fd81c44c6633ffad6cb1b96db3e6bb 260 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 259 16.058 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00525 f3fd81c44c6633ffad6cb1b96db3e6bb 260 PRINTS PR00123 ATP synthase A subunit signature 93 109 4.9E-14 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00525 f3fd81c44c6633ffad6cb1b96db3e6bb 260 PRINTS PR00123 ATP synthase A subunit signature 191 213 4.9E-14 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00525 f3fd81c44c6633ffad6cb1b96db3e6bb 260 PRINTS PR00123 ATP synthase A subunit signature 239 254 4.9E-14 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00525 f3fd81c44c6633ffad6cb1b96db3e6bb 260 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 24 254 2.2E-42 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00525 f3fd81c44c6633ffad6cb1b96db3e6bb 260 SUPERFAMILY SSF81336 85 253 7.19E-48 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00525 f3fd81c44c6633ffad6cb1b96db3e6bb 260 Gene3D G3DSA:1.20.120.220 84 259 5.4E-67 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_03005 639df89fa54c446c8d79f38a5b21fb23 125 SUPERFAMILY SSF101801 43 118 4.45E-22 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_03005 639df89fa54c446c8d79f38a5b21fb23 125 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 43 117 4.5E-29 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AMS64_03005 639df89fa54c446c8d79f38a5b21fb23 125 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 47 116 1.4E-23 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AMS64_03005 639df89fa54c446c8d79f38a5b21fb23 125 Gene3D G3DSA:2.30.330.10 33 120 3.7E-27 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_03005 639df89fa54c446c8d79f38a5b21fb23 125 PRINTS PR00956 Flagellar motor switch protein FliN signature 45 61 3.9E-22 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMS64_03005 639df89fa54c446c8d79f38a5b21fb23 125 PRINTS PR00956 Flagellar motor switch protein FliN signature 78 91 3.9E-22 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMS64_03005 639df89fa54c446c8d79f38a5b21fb23 125 PRINTS PR00956 Flagellar motor switch protein FliN signature 62 78 3.9E-22 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMS64_03005 639df89fa54c446c8d79f38a5b21fb23 125 PRINTS PR00956 Flagellar motor switch protein FliN signature 91 106 3.9E-22 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMS64_07930 73ec303496a90474f9368e6d8755cdd1 402 Pfam PF13356 Arm DNA-binding domain 4 91 1.8E-11 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AMS64_07930 73ec303496a90474f9368e6d8755cdd1 402 Gene3D G3DSA:3.30.160.390 1 103 3.3E-18 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AMS64_07930 73ec303496a90474f9368e6d8755cdd1 402 SUPERFAMILY SSF56349 99 388 3.53E-50 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_07930 73ec303496a90474f9368e6d8755cdd1 402 Pfam PF00589 Phage integrase family 234 376 6.2E-15 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_07930 73ec303496a90474f9368e6d8755cdd1 402 Gene3D G3DSA:1.10.150.130 104 183 1.5E-28 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_07930 73ec303496a90474f9368e6d8755cdd1 402 Gene3D G3DSA:1.10.443.10 219 392 8.8E-16 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_21750 2e3c93275d37ab80737f93bdca2a7de3 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_21750 2e3c93275d37ab80737f93bdca2a7de3 166 Gene3D G3DSA:3.30.70.1730 1 126 8.5E-37 T 11-10-2018 AMS64_21750 2e3c93275d37ab80737f93bdca2a7de3 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 27.112 T 11-10-2018 IPR022973 Ribosomal protein L10 AMS64_21750 2e3c93275d37ab80737f93bdca2a7de3 166 SUPERFAMILY SSF160369 5 161 3.14E-49 T 11-10-2018 AMS64_21750 2e3c93275d37ab80737f93bdca2a7de3 166 Pfam PF00466 Ribosomal protein L10 6 101 4.8E-27 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AMS64_02790 85f18553419abb0d490530f6fed70496 259 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 8.3E-101 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMS64_02790 85f18553419abb0d490530f6fed70496 259 Pfam PF02405 Permease MlaE 45 255 6.7E-77 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 Hamap MF_01498 DNA repair protein RadA [radA]. 21 453 42.287 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 Gene3D G3DSA:3.30.230.10 326 455 3.4E-22 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 431 1.1E-9 T 11-10-2018 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 Pfam PF13481 AAA domain 81 223 1.3E-12 T 11-10-2018 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 SUPERFAMILY SSF54211 256 455 2.31E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 SUPERFAMILY SSF52540 71 291 9.02E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 1.4E-222 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 PRINTS PR01874 DNA repair protein radA signature 10 34 4.4E-93 T 11-10-2018 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 PRINTS PR01874 DNA repair protein radA signature 125 142 4.4E-93 T 11-10-2018 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 PRINTS PR01874 DNA repair protein radA signature 175 199 4.4E-93 T 11-10-2018 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 PRINTS PR01874 DNA repair protein radA signature 323 346 4.4E-93 T 11-10-2018 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 PRINTS PR01874 DNA repair protein radA signature 84 112 4.4E-93 T 11-10-2018 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 PRINTS PR01874 DNA repair protein radA signature 214 242 4.4E-93 T 11-10-2018 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 PRINTS PR01874 DNA repair protein radA signature 249 275 4.4E-93 T 11-10-2018 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 Gene3D G3DSA:3.40.50.300 67 280 1.7E-37 T 11-10-2018 AMS64_20060 8cf44474bbe877e2bbd6d5e9af93b914 455 SMART SM00382 92 245 1.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_15815 afe03acbb04d530a7ada00c6335cb042 303 SUPERFAMILY SSF52172 179 303 8.11E-27 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_15815 afe03acbb04d530a7ada00c6335cb042 303 Gene3D G3DSA:2.40.50.180 39 153 5.7E-28 T 11-10-2018 AMS64_15815 afe03acbb04d530a7ada00c6335cb042 303 Gene3D G3DSA:2.30.30.40 24 147 5.7E-28 T 11-10-2018 AMS64_15815 afe03acbb04d530a7ada00c6335cb042 303 SMART SM00260 17 153 5.6E-21 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_15815 afe03acbb04d530a7ada00c6335cb042 303 PIRSF PIRSF002867 1 303 1.3E-105 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AMS64_15815 afe03acbb04d530a7ada00c6335cb042 303 Gene3D G3DSA:3.40.50.2300 179 303 2.5E-27 T 11-10-2018 AMS64_15815 afe03acbb04d530a7ada00c6335cb042 303 Pfam PF00072 Response regulator receiver domain 181 300 9.6E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_15815 afe03acbb04d530a7ada00c6335cb042 303 SMART SM00448 179 299 1.6E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_15815 afe03acbb04d530a7ada00c6335cb042 303 Pfam PF01584 CheW-like domain 21 155 3.5E-35 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_15815 afe03acbb04d530a7ada00c6335cb042 303 SUPERFAMILY SSF50341 16 157 3.27E-36 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMS64_17905 30a57a71b6f4564354283cce2620c552 184 Pfam PF02622 Uncharacterized ACR, COG1678 13 171 2.7E-50 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 AMS64_17905 30a57a71b6f4564354283cce2620c552 184 Gene3D G3DSA:3.40.1740.10 1 184 2.9E-67 T 11-10-2018 AMS64_17905 30a57a71b6f4564354283cce2620c552 184 SUPERFAMILY SSF143456 2 183 2.88E-64 T 11-10-2018 AMS64_17905 30a57a71b6f4564354283cce2620c552 184 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 2 184 37.969 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 AMS64_18580 3fd0da4359978b83c3d44d2e09c985db 276 Pfam PF13503 Domain of unknown function (DUF4123) 23 128 1.6E-16 T 11-10-2018 IPR025391 Domain of unknown function DUF4123 AMS64_08895 d90d8c3a3017286194b75c26adc081ff 1475 SUPERFAMILY SSF52540 19 1431 9.87E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08895 d90d8c3a3017286194b75c26adc081ff 1475 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1423 8.6E-15 T 11-10-2018 AMS64_08895 d90d8c3a3017286194b75c26adc081ff 1475 Pfam PF16330 MukB hinge domain 644 809 8.5E-67 T 11-10-2018 IPR032520 MukB, hinge domain AMS64_08895 d90d8c3a3017286194b75c26adc081ff 1475 Pfam PF04310 MukB N-terminal 2 225 1.6E-120 T 11-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AMS64_08895 d90d8c3a3017286194b75c26adc081ff 1475 SUPERFAMILY SSF52540 20 222 8.48E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08895 d90d8c3a3017286194b75c26adc081ff 1475 Gene3D G3DSA:1.20.58.850 584 847 1.2E-101 T 11-10-2018 AMS64_08895 d90d8c3a3017286194b75c26adc081ff 1475 Gene3D G3DSA:1.20.58.850 619 829 1.2E-101 T 11-10-2018 AMS64_08895 d90d8c3a3017286194b75c26adc081ff 1475 Gene3D G3DSA:3.40.1140.10 1 225 1.0E-91 T 11-10-2018 AMS64_08895 d90d8c3a3017286194b75c26adc081ff 1475 Gene3D G3DSA:1.20.1060.30 666 777 1.2E-101 T 11-10-2018 AMS64_08895 d90d8c3a3017286194b75c26adc081ff 1475 Gene3D G3DSA:3.40.1140.10 1382 1467 2.0E-37 T 11-10-2018 AMS64_12420 934b2afe31436b2d7fef196efc26b0a2 282 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 2.8E-69 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_12420 934b2afe31436b2d7fef196efc26b0a2 282 PRINTS PR00783 Major intrinsic protein family signature 11 30 9.7E-54 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_12420 934b2afe31436b2d7fef196efc26b0a2 282 PRINTS PR00783 Major intrinsic protein family signature 50 74 9.7E-54 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_12420 934b2afe31436b2d7fef196efc26b0a2 282 PRINTS PR00783 Major intrinsic protein family signature 153 171 9.7E-54 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_12420 934b2afe31436b2d7fef196efc26b0a2 282 PRINTS PR00783 Major intrinsic protein family signature 186 208 9.7E-54 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_12420 934b2afe31436b2d7fef196efc26b0a2 282 PRINTS PR00783 Major intrinsic protein family signature 87 106 9.7E-54 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_12420 934b2afe31436b2d7fef196efc26b0a2 282 PRINTS PR00783 Major intrinsic protein family signature 236 256 9.7E-54 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_12420 934b2afe31436b2d7fef196efc26b0a2 282 SUPERFAMILY SSF81338 9 257 1.18E-75 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMS64_12420 934b2afe31436b2d7fef196efc26b0a2 282 Pfam PF00230 Major intrinsic protein 8 253 1.6E-62 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_12420 934b2afe31436b2d7fef196efc26b0a2 282 Gene3D G3DSA:1.20.1080.10 4 259 1.3E-97 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMS64_12420 934b2afe31436b2d7fef196efc26b0a2 282 ProSitePatterns PS00221 MIP family signature. 68 76 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 AMS64_15060 082e914897b3a2ff5d5470f324dda2b2 187 SUPERFAMILY SSF53756 45 184 1.02E-7 T 11-10-2018 AMS64_15060 082e914897b3a2ff5d5470f324dda2b2 187 Gene3D G3DSA:3.40.50.2000 8 136 2.8E-27 T 11-10-2018 AMS64_15060 082e914897b3a2ff5d5470f324dda2b2 187 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 80 125 2.4E-4 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AMS64_14745 f9b06503afdf72f9e7f8ef4deda25abb 116 SUPERFAMILY SSF52833 5 115 5.86E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_14745 f9b06503afdf72f9e7f8ef4deda25abb 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 115 3.4E-43 T 11-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AMS64_14745 f9b06503afdf72f9e7f8ef4deda25abb 116 Gene3D G3DSA:3.40.30.10 1 116 7.4E-46 T 11-10-2018 AMS64_14745 f9b06503afdf72f9e7f8ef4deda25abb 116 Pfam PF03960 ArsC family 7 114 1.2E-18 T 11-10-2018 IPR006660 Arsenate reductase-like AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 454 9.4E-197 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 Gene3D G3DSA:1.20.200.10 108 445 2.0E-138 T 11-10-2018 AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 39.975 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.9E-28 T 11-10-2018 IPR000362 Fumarate lyase family AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.9E-28 T 11-10-2018 IPR000362 Fumarate lyase family AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.9E-28 T 11-10-2018 IPR000362 Fumarate lyase family AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.9E-28 T 11-10-2018 IPR000362 Fumarate lyase family AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 SUPERFAMILY SSF48557 3 456 6.28E-135 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 Gene3D G3DSA:1.10.275.10 1 107 8.1E-37 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 Gene3D G3DSA:1.10.40.30 363 433 2.0E-138 T 11-10-2018 AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.1E-20 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 Pfam PF00206 Lyase 6 301 2.3E-92 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.4E-65 T 11-10-2018 AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.4E-65 T 11-10-2018 AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.4E-65 T 11-10-2018 AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.4E-65 T 11-10-2018 AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.4E-65 T 11-10-2018 AMS64_03485 c1a05cd9345e00fb2f647832a43be245 461 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.4E-65 T 11-10-2018 AMS64_18595 0102438c1b5967ef45049b5e8fcd3c40 294 Pfam PF00892 EamA-like transporter family 147 279 1.3E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_18595 0102438c1b5967ef45049b5e8fcd3c40 294 Pfam PF00892 EamA-like transporter family 13 134 3.0E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_18595 0102438c1b5967ef45049b5e8fcd3c40 294 SUPERFAMILY SSF103481 183 285 1.23E-12 T 11-10-2018 AMS64_18595 0102438c1b5967ef45049b5e8fcd3c40 294 SUPERFAMILY SSF103481 39 137 7.45E-8 T 11-10-2018 AMS64_05415 19284c497f08791ec8554c71a22ba7c2 105 Pfam PF03091 CutA1 divalent ion tolerance protein 5 101 7.9E-37 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AMS64_05415 19284c497f08791ec8554c71a22ba7c2 105 SUPERFAMILY SSF54913 2 104 1.22E-37 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMS64_05415 19284c497f08791ec8554c71a22ba7c2 105 Gene3D G3DSA:3.30.70.120 1 105 5.0E-41 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMS64_06200 010188c39dd1b2b7f118de7b64a8f12e 640 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 613 1.5E-71 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMS64_06200 010188c39dd1b2b7f118de7b64a8f12e 640 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 616 1.6E-231 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_06200 010188c39dd1b2b7f118de7b64a8f12e 640 Gene3D G3DSA:3.90.1310.10 65 249 7.5E-49 T 11-10-2018 AMS64_06200 010188c39dd1b2b7f118de7b64a8f12e 640 SUPERFAMILY SSF56601 255 616 1.36E-89 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMS64_06200 010188c39dd1b2b7f118de7b64a8f12e 640 SUPERFAMILY SSF56519 57 253 2.88E-52 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AMS64_06200 010188c39dd1b2b7f118de7b64a8f12e 640 Gene3D G3DSA:3.30.1390.30 86 161 7.5E-49 T 11-10-2018 AMS64_06200 010188c39dd1b2b7f118de7b64a8f12e 640 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 620 49.879 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_06200 010188c39dd1b2b7f118de7b64a8f12e 640 Gene3D G3DSA:3.40.710.10 250 618 1.2E-89 T 11-10-2018 AMS64_06200 010188c39dd1b2b7f118de7b64a8f12e 640 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 240 5.9E-45 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMS64_12515 eaeed58fbdb82b48f01d2adefe0d95bb 523 PIRSF PIRSF006446 360 522 2.6E-33 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMS64_12515 eaeed58fbdb82b48f01d2adefe0d95bb 523 PIRSF PIRSF006446 3 327 5.6E-110 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMS64_12515 eaeed58fbdb82b48f01d2adefe0d95bb 523 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 504 8.0E-168 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 278 767 1.9E-70 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 84 4.6E-25 T 11-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 SUPERFAMILY SSF55008 86 160 4.06E-17 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 SUPERFAMILY SSF81653 308 404 1.19E-23 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 SUPERFAMILY SSF56784 502 790 1.8E-47 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 276 793 4.3E-116 T 11-10-2018 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 244 792 2.0E-157 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 Gene3D G3DSA:3.40.50.1000 483 729 4.4E-62 T 11-10-2018 IPR023214 HAD superfamily AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 226 792 2.0E-141 T 11-10-2018 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 Gene3D G3DSA:3.30.70.100 89 171 4.7E-14 T 11-10-2018 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 Pfam PF00702 haloacid dehalogenase-like hydrolase 501 703 6.5E-36 T 11-10-2018 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 Gene3D G3DSA:3.40.1110.10 513 622 4.4E-62 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 Pfam PF00122 E1-E2 ATPase 306 483 5.1E-49 T 11-10-2018 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 355 369 1.4E-21 T 11-10-2018 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 637 647 1.4E-21 T 11-10-2018 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 503 517 1.4E-21 T 11-10-2018 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 713 725 1.4E-21 T 11-10-2018 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 690 709 1.4E-21 T 11-10-2018 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 SUPERFAMILY SSF81665 255 774 4.97E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 505 511 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 Gene3D G3DSA:2.70.150.20 300 409 2.6E-31 T 11-10-2018 AMS64_09470 35734315e64c654bf307f4914d4c50bc 794 Pfam PF00403 Heavy-metal-associated domain 93 152 1.6E-8 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMS64_20380 cfccfeb8be8a40515345cc98647eae28 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 3.1E-90 T 11-10-2018 IPR005583 Peroxide stress protein YaaA AMS64_20380 cfccfeb8be8a40515345cc98647eae28 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.683 T 11-10-2018 IPR005583 Peroxide stress protein YaaA AMS64_15030 b15b5ea7a7d5a77c45a40410a4f711ce 277 Gene3D G3DSA:3.40.50.1980 27 145 1.3E-35 T 11-10-2018 AMS64_15030 b15b5ea7a7d5a77c45a40410a4f711ce 277 SUPERFAMILY SSF53807 26 271 1.18E-59 T 11-10-2018 AMS64_15030 b15b5ea7a7d5a77c45a40410a4f711ce 277 Gene3D G3DSA:3.40.50.1980 147 274 2.8E-28 T 11-10-2018 AMS64_15030 b15b5ea7a7d5a77c45a40410a4f711ce 277 Pfam PF01497 Periplasmic binding protein 31 243 2.9E-29 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AMS64_13890 e4c7bdd5678536e9a54498a65362e9c6 97 SUPERFAMILY SSF46689 4 89 1.59E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_13890 e4c7bdd5678536e9a54498a65362e9c6 97 Gene3D G3DSA:1.10.10.60 8 87 5.7E-12 T 11-10-2018 AMS64_13890 e4c7bdd5678536e9a54498a65362e9c6 97 Pfam PF01527 Transposase 1 77 1.3E-16 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMS64_02260 685109ddd587e119f97df5e3085b197c 567 SUPERFAMILY SSF46785 8 81 8.82E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_02260 685109ddd587e119f97df5e3085b197c 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 313 2.0E-16 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AMS64_02260 685109ddd587e119f97df5e3085b197c 567 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 4.4E-36 T 11-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AMS64_02260 685109ddd587e119f97df5e3085b197c 567 SUPERFAMILY SSF53850 117 557 2.53E-61 T 11-10-2018 AMS64_02260 685109ddd587e119f97df5e3085b197c 567 Gene3D G3DSA:3.40.190.10 113 319 3.3E-30 T 11-10-2018 AMS64_20085 87bb8fa235607f85faecc17ad152032f 238 SUPERFAMILY SSF53167 3 234 6.41E-95 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMS64_20085 87bb8fa235607f85faecc17ad152032f 238 Pfam PF01048 Phosphorylase superfamily 16 217 3.2E-39 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMS64_20085 87bb8fa235607f85faecc17ad152032f 238 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_20085 87bb8fa235607f85faecc17ad152032f 238 Gene3D G3DSA:3.40.50.1580 1 237 7.8E-78 T 11-10-2018 AMS64_20085 87bb8fa235607f85faecc17ad152032f 238 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.661 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AMS64_20085 87bb8fa235607f85faecc17ad152032f 238 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 3.1E-123 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AMS64_09265 730432b8016f3dc2747512412e00f228 107 Gene3D G3DSA:3.10.20.30 3 106 2.3E-17 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_09265 730432b8016f3dc2747512412e00f228 107 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 57 65 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMS64_09265 730432b8016f3dc2747512412e00f228 107 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 33 96 2.0E-7 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMS64_09265 730432b8016f3dc2747512412e00f228 107 SUPERFAMILY SSF54292 19 104 1.31E-20 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMS64_13015 33f71296096aacb91333ad6d3ff2ddb4 399 Gene3D G3DSA:1.10.287.470 102 175 1.8E-75 T 11-10-2018 AMS64_13015 33f71296096aacb91333ad6d3ff2ddb4 399 Gene3D G3DSA:2.40.50.100 67 212 1.8E-75 T 11-10-2018 AMS64_13015 33f71296096aacb91333ad6d3ff2ddb4 399 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 379 2.2E-80 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_13015 33f71296096aacb91333ad6d3ff2ddb4 399 Gene3D G3DSA:2.40.420.20 289 381 5.2E-23 T 11-10-2018 AMS64_13015 33f71296096aacb91333ad6d3ff2ddb4 399 Gene3D G3DSA:2.40.30.170 61 288 1.8E-75 T 11-10-2018 AMS64_13015 33f71296096aacb91333ad6d3ff2ddb4 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 298 9.9E-9 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMS64_13015 33f71296096aacb91333ad6d3ff2ddb4 399 SUPERFAMILY SSF111369 55 305 7.32E-70 T 11-10-2018 AMS64_08210 9fe7863fad2e4192380c6f2824b69574 372 PIRSF PIRSF000112 1 363 1.6E-84 T 11-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 AMS64_08210 9fe7863fad2e4192380c6f2824b69574 372 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 351 2.2E-58 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AMS64_08210 9fe7863fad2e4192380c6f2824b69574 372 Gene3D G3DSA:3.40.50.1970 6 162 3.9E-39 T 11-10-2018 AMS64_08210 9fe7863fad2e4192380c6f2824b69574 372 SUPERFAMILY SSF56796 6 360 1.57E-78 T 11-10-2018 AMS64_08210 9fe7863fad2e4192380c6f2824b69574 372 Gene3D G3DSA:1.20.1090.10 163 371 1.1E-64 T 11-10-2018 AMS64_08775 27063bf1e54ec5afb631552a17746609 195 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 30.482 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AMS64_08775 27063bf1e54ec5afb631552a17746609 195 SUPERFAMILY SSF52218 1 193 1.84E-51 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_08775 27063bf1e54ec5afb631552a17746609 195 Pfam PF02525 Flavodoxin-like fold 3 192 3.8E-41 T 11-10-2018 IPR003680 Flavodoxin-like fold AMS64_08775 27063bf1e54ec5afb631552a17746609 195 Gene3D G3DSA:3.40.50.360 1 195 2.3E-53 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_19665 75b9267aa87f149ce0291c1a6da2ba5e 572 SUPERFAMILY SSF52518 2 180 5.89E-65 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_19665 75b9267aa87f149ce0291c1a6da2ba5e 572 Gene3D G3DSA:3.40.50.1220 190 361 5.6E-63 T 11-10-2018 AMS64_19665 75b9267aa87f149ce0291c1a6da2ba5e 572 SUPERFAMILY SSF52467 190 362 1.77E-64 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMS64_19665 75b9267aa87f149ce0291c1a6da2ba5e 572 Gene3D G3DSA:3.40.50.970 364 564 1.3E-67 T 11-10-2018 AMS64_19665 75b9267aa87f149ce0291c1a6da2ba5e 572 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 567 7.4E-267 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMS64_19665 75b9267aa87f149ce0291c1a6da2ba5e 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 543 1.3E-50 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMS64_19665 75b9267aa87f149ce0291c1a6da2ba5e 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 1.7E-60 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMS64_19665 75b9267aa87f149ce0291c1a6da2ba5e 572 Gene3D G3DSA:3.40.50.970 1 178 1.5E-71 T 11-10-2018 AMS64_19665 75b9267aa87f149ce0291c1a6da2ba5e 572 SUPERFAMILY SSF52518 372 565 4.11E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_19665 75b9267aa87f149ce0291c1a6da2ba5e 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 3.4E-46 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMS64_16950 7ba741338bf8096c6b3b074448a63fe6 122 SMART SM00418 8 88 8.2E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_16950 7ba741338bf8096c6b3b074448a63fe6 122 Gene3D G3DSA:1.10.10.10 1 93 3.4E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_16950 7ba741338bf8096c6b3b074448a63fe6 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.5E-5 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_16950 7ba741338bf8096c6b3b074448a63fe6 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.5E-5 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_16950 7ba741338bf8096c6b3b074448a63fe6 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.5E-5 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_16950 7ba741338bf8096c6b3b074448a63fe6 122 SUPERFAMILY SSF46785 3 93 1.1E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_16950 7ba741338bf8096c6b3b074448a63fe6 122 Pfam PF12840 Helix-turn-helix domain 8 69 5.0E-12 T 11-10-2018 AMS64_09135 4cd88f5ed280b070652705bf9c4b9459 292 Pfam PF00561 alpha/beta hydrolase fold 38 277 1.0E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_09135 4cd88f5ed280b070652705bf9c4b9459 292 SUPERFAMILY SSF53474 18 289 6.08E-51 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_09135 4cd88f5ed280b070652705bf9c4b9459 292 Gene3D G3DSA:3.40.50.1820 9 285 1.1E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_09135 4cd88f5ed280b070652705bf9c4b9459 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 3.8E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_09135 4cd88f5ed280b070652705bf9c4b9459 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 3.8E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_09135 4cd88f5ed280b070652705bf9c4b9459 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 77 3.8E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_18740 529465039fc3da3bce33e3b3872ea4b6 163 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 1 156 21.603 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AMS64_18740 529465039fc3da3bce33e3b3872ea4b6 163 SUPERFAMILY SSF64438 4 156 1.1E-39 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMS64_18740 529465039fc3da3bce33e3b3872ea4b6 163 Gene3D G3DSA:3.30.1330.200 2 161 1.0E-43 T 11-10-2018 IPR038592 CheD-like superfamily AMS64_18740 529465039fc3da3bce33e3b3872ea4b6 163 Pfam PF03975 CheD chemotactic sensory transduction 47 151 2.7E-22 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AMS64_16645 e125625338fc9f2217e406224a6762fa 206 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 92 177 2.5E-7 T 11-10-2018 IPR034756 Type II secretion system (T2SS), protein M subtype b AMS64_01190 3fbd799d5909d217355f7feeccd61cd9 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 307 2.4E-13 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AMS64_01190 3fbd799d5909d217355f7feeccd61cd9 345 SUPERFAMILY SSF53756 2 337 2.2E-61 T 11-10-2018 AMS64_01190 3fbd799d5909d217355f7feeccd61cd9 345 Gene3D G3DSA:3.40.50.2000 165 338 1.4E-20 T 11-10-2018 AMS64_01190 3fbd799d5909d217355f7feeccd61cd9 345 Gene3D G3DSA:3.40.50.2000 1 148 1.6E-22 T 11-10-2018 AMS64_14665 4122d2fad0654c18f8b3ddda66747942 212 SUPERFAMILY SSF52833 1 84 8.31E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_14665 4122d2fad0654c18f8b3ddda66747942 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 78 2.8E-16 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMS64_14665 4122d2fad0654c18f8b3ddda66747942 212 Gene3D G3DSA:1.20.1050.10 89 212 1.7E-54 T 11-10-2018 AMS64_14665 4122d2fad0654c18f8b3ddda66747942 212 Pfam PF14497 Glutathione S-transferase, C-terminal domain 121 196 1.3E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMS64_14665 4122d2fad0654c18f8b3ddda66747942 212 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 3 210 1.8E-87 T 11-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 AMS64_14665 4122d2fad0654c18f8b3ddda66747942 212 Gene3D G3DSA:3.40.30.10 1 88 2.7E-28 T 11-10-2018 AMS64_14665 4122d2fad0654c18f8b3ddda66747942 212 SUPERFAMILY SSF47616 81 210 1.39E-32 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMS64_19520 deceb3c4a81879b683a41b557d2f4eef 213 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 28 208 1.5E-35 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 AMS64_02765 8a51f273f3d2ce64fb2ebab13ae8a5f3 418 Gene3D G3DSA:3.65.10.10 21 228 1.4E-165 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMS64_02765 8a51f273f3d2ce64fb2ebab13ae8a5f3 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 2.2E-180 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_02765 8a51f273f3d2ce64fb2ebab13ae8a5f3 418 SUPERFAMILY SSF55205 1 417 2.94E-144 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMS64_02765 8a51f273f3d2ce64fb2ebab13ae8a5f3 418 Gene3D G3DSA:3.65.10.10 12 413 1.4E-165 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMS64_02765 8a51f273f3d2ce64fb2ebab13ae8a5f3 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 406 8.1E-116 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AMS64_02765 8a51f273f3d2ce64fb2ebab13ae8a5f3 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.307 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_05340 c61d8f0d26080c04b399db91b8f3b126 418 SMART SM00283 155 416 3.4E-67 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_05340 c61d8f0d26080c04b399db91b8f3b126 418 SUPERFAMILY SSF58104 108 417 1.31E-72 T 11-10-2018 AMS64_05340 c61d8f0d26080c04b399db91b8f3b126 418 Gene3D G3DSA:1.10.287.950 88 418 7.5E-71 T 11-10-2018 AMS64_05340 c61d8f0d26080c04b399db91b8f3b126 418 SMART SM00304 88 140 0.0013 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_05340 c61d8f0d26080c04b399db91b8f3b126 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 200 383 6.7E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_12820 5b60d39798fba3bdfe885a246e314693 321 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 7 317 6.9E-143 T 11-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein AMS64_12820 5b60d39798fba3bdfe885a246e314693 321 SUPERFAMILY SSF56059 43 282 7.38E-16 T 11-10-2018 AMS64_12820 5b60d39798fba3bdfe885a246e314693 321 Pfam PF14397 Sugar-transfer associated ATP-grasp 24 297 4.2E-110 T 11-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMS64_10255 8e9e1f3fc47d877150933cef1f1a82a6 317 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 47 62 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10255 8e9e1f3fc47d877150933cef1f1a82a6 317 Pfam PF00146 NADH dehydrogenase 17 311 7.4E-48 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_02575 f93fbffc8eb4ee790125721f50321e57 311 SUPERFAMILY SSF55874 157 265 7.08E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_13060 d61106e2a717a3dd3a08bbeea757ce4b 305 Pfam PF01497 Periplasmic binding protein 78 273 1.3E-18 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AMS64_13060 d61106e2a717a3dd3a08bbeea757ce4b 305 Gene3D G3DSA:3.40.50.1980 19 129 5.2E-24 T 11-10-2018 AMS64_13060 d61106e2a717a3dd3a08bbeea757ce4b 305 Gene3D G3DSA:3.40.50.1980 133 304 1.3E-40 T 11-10-2018 AMS64_13060 d61106e2a717a3dd3a08bbeea757ce4b 305 SUPERFAMILY SSF53807 25 297 7.46E-49 T 11-10-2018 AMS64_08205 bc1816dd14718ab7e248f9aea15b4df2 287 Pfam PF08543 Phosphomethylpyrimidine kinase 75 259 8.0E-17 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AMS64_08205 bc1816dd14718ab7e248f9aea15b4df2 287 Gene3D G3DSA:3.40.1190.20 1 287 5.3E-83 T 11-10-2018 IPR029056 Ribokinase-like AMS64_08205 bc1816dd14718ab7e248f9aea15b4df2 287 SUPERFAMILY SSF53613 1 278 3.43E-67 T 11-10-2018 IPR029056 Ribokinase-like AMS64_08205 bc1816dd14718ab7e248f9aea15b4df2 287 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 283 2.1E-113 T 11-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AMS64_08205 bc1816dd14718ab7e248f9aea15b4df2 287 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 51.43 T 11-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AMS64_21075 18695dce55268be56e0195110fb51557 155 Pfam PF05433 Glycine zipper 2TM domain 62 103 1.2E-7 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AMS64_01215 1467be60c7c97e3e933822d379b57112 110 Pfam PF10973 Protein of unknown function (DUF2799) 26 107 5.4E-19 T 11-10-2018 IPR021242 Protein of unknown function DUF2799 AMS64_04745 aa2bd4de989f4d94d0aaefb7802a4178 180 Gene3D G3DSA:3.40.30.10 22 175 4.2E-5 T 11-10-2018 AMS64_04745 aa2bd4de989f4d94d0aaefb7802a4178 180 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 4 179 1.4E-76 T 11-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AMS64_04745 aa2bd4de989f4d94d0aaefb7802a4178 180 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 21 178 6.0E-73 T 11-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AMS64_19680 7b789fe522cb534a0d566e4b234f4d3e 206 Gene3D G3DSA:1.10.357.10 1 205 2.9E-53 T 11-10-2018 AMS64_19680 7b789fe522cb534a0d566e4b234f4d3e 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 9.4E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_19680 7b789fe522cb534a0d566e4b234f4d3e 206 SUPERFAMILY SSF46689 6 80 2.36E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_19680 7b789fe522cb534a0d566e4b234f4d3e 206 SUPERFAMILY SSF48498 88 192 5.78E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMS64_16120 87b46634b9627277bd1a25e30e05af21 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 11-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 AMS64_16120 87b46634b9627277bd1a25e30e05af21 266 Gene3D G3DSA:3.40.50.1360 1 266 5.3E-114 T 11-10-2018 AMS64_16120 87b46634b9627277bd1a25e30e05af21 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 17 227 7.1E-19 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AMS64_16120 87b46634b9627277bd1a25e30e05af21 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.579 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 AMS64_16120 87b46634b9627277bd1a25e30e05af21 266 SUPERFAMILY SSF100950 1 263 4.55E-105 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AMS64_16120 87b46634b9627277bd1a25e30e05af21 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 7.5E-138 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 AMS64_16230 545e5be3556c5230f7f4a7660ee5504c 570 Gene3D G3DSA:1.10.287.950 243 570 2.6E-70 T 11-10-2018 AMS64_16230 545e5be3556c5230f7f4a7660ee5504c 570 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 382 536 2.5E-47 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_16230 545e5be3556c5230f7f4a7660ee5504c 570 SUPERFAMILY SSF58104 282 570 2.35E-71 T 11-10-2018 AMS64_16230 545e5be3556c5230f7f4a7660ee5504c 570 SMART SM00283 308 569 1.2E-78 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_14395 9748a526389cb9441fd294246f4f102a 256 SUPERFAMILY SSF52540 17 247 2.34E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_14395 9748a526389cb9441fd294246f4f102a 256 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_14395 9748a526389cb9441fd294246f4f102a 256 SMART SM00382 40 225 1.2E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_14395 9748a526389cb9441fd294246f4f102a 256 PIRSF PIRSF039085 12 253 3.7E-101 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMS64_14395 9748a526389cb9441fd294246f4f102a 256 Gene3D G3DSA:3.40.50.300 15 256 3.6E-81 T 11-10-2018 AMS64_14395 9748a526389cb9441fd294246f4f102a 256 Pfam PF00005 ABC transporter 31 177 1.0E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_12825 63dad3fc623d5949404b9b86d068b372 200 PIRSF PIRSF000239 1 199 3.0E-62 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMS64_12825 63dad3fc623d5949404b9b86d068b372 200 Pfam PF00578 AhpC/TSA family 4 139 6.0E-36 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMS64_12825 63dad3fc623d5949404b9b86d068b372 200 Gene3D G3DSA:3.40.30.10 1 197 2.6E-76 T 11-10-2018 AMS64_12825 63dad3fc623d5949404b9b86d068b372 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 1.2E-12 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMS64_12825 63dad3fc623d5949404b9b86d068b372 200 SUPERFAMILY SSF52833 1 194 4.58E-70 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_09530 111213ba1fd05fde976cb6ecd74284b9 1612 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 11-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMS64_09530 111213ba1fd05fde976cb6ecd74284b9 1612 SUPERFAMILY SSF53223 757 958 4.22E-22 T 11-10-2018 AMS64_09530 111213ba1fd05fde976cb6ecd74284b9 1612 SUPERFAMILY SSF51735 947 1283 7.22E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_09530 111213ba1fd05fde976cb6ecd74284b9 1612 PIRSF PIRSF036761 1 1610 0.0 T 11-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMS64_07505 0f4cd39ebd1fbc6003af89e66fa84319 763 Pfam PF02901 Pyruvate formate lyase-like 27 618 5.4E-195 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AMS64_07505 0f4cd39ebd1fbc6003af89e66fa84319 763 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 763 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AMS64_07505 0f4cd39ebd1fbc6003af89e66fa84319 763 Pfam PF01228 Glycine radical 634 745 4.2E-40 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 AMS64_07505 0f4cd39ebd1fbc6003af89e66fa84319 763 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AMS64_07505 0f4cd39ebd1fbc6003af89e66fa84319 763 PIRSF PIRSF000379 12 763 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AMS64_07505 0f4cd39ebd1fbc6003af89e66fa84319 763 SUPERFAMILY SSF51998 11 763 3.2E-276 T 11-10-2018 AMS64_07505 0f4cd39ebd1fbc6003af89e66fa84319 763 Gene3D G3DSA:3.20.70.20 7 763 0.0 T 11-10-2018 AMS64_21025 de59bd9ee1dd4370ed426f12b256c47f 361 Pfam PF01594 AI-2E family transporter 16 343 7.2E-36 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AMS64_09230 b7986a6a10e356dc51829957f38a4c1b 122 SUPERFAMILY SSF53062 1 120 1.23E-27 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AMS64_09230 b7986a6a10e356dc51829957f38a4c1b 122 Gene3D G3DSA:3.40.50.510 1 122 2.8E-30 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AMS64_09230 b7986a6a10e356dc51829957f38a4c1b 122 Pfam PF03610 PTS system fructose IIA component 4 105 3.3E-17 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMS64_00370 1a493fb5af1012fbb1b03b45041e317f 274 SMART SM00342 170 252 2.2E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_00370 1a493fb5af1012fbb1b03b45041e317f 274 SUPERFAMILY SSF46689 206 254 5.82E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_00370 1a493fb5af1012fbb1b03b45041e317f 274 Gene3D G3DSA:1.10.10.60 214 260 5.5E-10 T 11-10-2018 AMS64_00370 1a493fb5af1012fbb1b03b45041e317f 274 Gene3D G3DSA:2.60.120.10 27 95 1.0E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_00370 1a493fb5af1012fbb1b03b45041e317f 274 SUPERFAMILY SSF51182 30 170 5.04E-14 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_00370 1a493fb5af1012fbb1b03b45041e317f 274 Gene3D G3DSA:1.10.10.60 159 213 2.1E-9 T 11-10-2018 AMS64_00370 1a493fb5af1012fbb1b03b45041e317f 274 Pfam PF12833 Helix-turn-helix domain 176 253 3.1E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_06855 0e83718f8559f0d7a6fc30b31f3c3cc4 246 SUPERFAMILY SSF53850 28 245 1.25E-31 T 11-10-2018 AMS64_06855 0e83718f8559f0d7a6fc30b31f3c3cc4 246 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 243 6.8E-15 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_06855 0e83718f8559f0d7a6fc30b31f3c3cc4 246 Gene3D G3DSA:3.40.190.10 34 244 1.1E-20 T 11-10-2018 AMS64_06855 0e83718f8559f0d7a6fc30b31f3c3cc4 246 Gene3D G3DSA:3.40.190.10 109 206 1.1E-20 T 11-10-2018 AMS64_22190 769765a46e79ef16ae983148c5c40b8e 300 Pfam PF06719 AraC-type transcriptional regulator N-terminus 26 174 1.6E-38 T 11-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AMS64_22190 769765a46e79ef16ae983148c5c40b8e 300 Gene3D G3DSA:1.10.10.60 183 292 3.3E-26 T 11-10-2018 AMS64_22190 769765a46e79ef16ae983148c5c40b8e 300 Pfam PF12833 Helix-turn-helix domain 210 285 1.9E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_22190 769765a46e79ef16ae983148c5c40b8e 300 SUPERFAMILY SSF46689 188 238 1.1E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_22190 769765a46e79ef16ae983148c5c40b8e 300 SUPERFAMILY SSF46689 240 291 1.25E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_22190 769765a46e79ef16ae983148c5c40b8e 300 SMART SM00342 204 287 6.1E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_04860 9d90404066cbd28e7e655c34c160de15 175 SMART SM00450 54 171 2.0E-12 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_04860 9d90404066cbd28e7e655c34c160de15 175 Pfam PF00581 Rhodanese-like domain 55 167 8.9E-16 T 11-10-2018 IPR001763 Rhodanese-like domain AMS64_04860 9d90404066cbd28e7e655c34c160de15 175 ProSitePatterns PS00380 Rhodanese signature 1. 80 91 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AMS64_04860 9d90404066cbd28e7e655c34c160de15 175 SUPERFAMILY SSF52821 45 172 1.7E-23 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_04860 9d90404066cbd28e7e655c34c160de15 175 Gene3D G3DSA:3.40.250.10 30 174 2.8E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMS64_21275 271e5eb3ab989e3aa2983360772add69 165 Pfam PF13302 Acetyltransferase (GNAT) domain 6 145 8.3E-24 T 11-10-2018 IPR000182 GNAT domain AMS64_21275 271e5eb3ab989e3aa2983360772add69 165 SUPERFAMILY SSF55729 2 147 3.48E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_21275 271e5eb3ab989e3aa2983360772add69 165 Gene3D G3DSA:3.40.630.30 1 159 3.2E-36 T 11-10-2018 AMS64_10465 747332b2c1e9f73ac331314e89fe100e 211 Pfam PF02397 Bacterial sugar transferase 13 206 1.5E-56 T 11-10-2018 IPR003362 Bacterial sugar transferase AMS64_10990 223cfa6579f04bd45521096fe6ab768f 202 SMART SM00702 13 189 3.1E-30 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AMS64_10990 223cfa6579f04bd45521096fe6ab768f 202 Gene3D G3DSA:2.60.120.620 3 193 7.5E-53 T 11-10-2018 AMS64_10990 223cfa6579f04bd45521096fe6ab768f 202 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 99 189 1.3E-20 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMS64_09535 88e987912fa649fcccb99f6dbcfa28bd 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 2.8E-89 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AMS64_09535 88e987912fa649fcccb99f6dbcfa28bd 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AMS64_09535 88e987912fa649fcccb99f6dbcfa28bd 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 3.9E-145 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AMS64_09535 88e987912fa649fcccb99f6dbcfa28bd 336 PIRSF PIRSF000164 11 336 5.7E-97 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AMS64_09535 88e987912fa649fcccb99f6dbcfa28bd 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AMS64_09535 88e987912fa649fcccb99f6dbcfa28bd 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.388 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AMS64_09535 88e987912fa649fcccb99f6dbcfa28bd 336 SUPERFAMILY SSF51395 1 335 4.76E-106 T 11-10-2018 AMS64_09535 88e987912fa649fcccb99f6dbcfa28bd 336 Gene3D G3DSA:3.20.20.70 2 336 1.5E-138 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_20545 03c9986a655027c090c53aaa53ae6fd5 508 PIRSF PIRSF028991 1 507 1.0E-244 T 11-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted AMS64_20545 03c9986a655027c090c53aaa53ae6fd5 508 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 6 497 3.5E-231 T 11-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted AMS64_20545 03c9986a655027c090c53aaa53ae6fd5 508 Pfam PF11230 Protein of unknown function (DUF3029) 16 497 4.4E-217 T 11-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted AMS64_20545 03c9986a655027c090c53aaa53ae6fd5 508 SUPERFAMILY SSF51998 20 460 4.27E-85 T 11-10-2018 AMS64_20705 17c54734a71bcb9f5e8337c2765ea018 112 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 111 4.9E-45 T 11-10-2018 IPR008231 Probable chaperone CsaA AMS64_20705 17c54734a71bcb9f5e8337c2765ea018 112 SUPERFAMILY SSF50249 3 111 4.9E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_20705 17c54734a71bcb9f5e8337c2765ea018 112 Pfam PF01588 Putative tRNA binding domain 14 109 1.8E-8 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AMS64_20705 17c54734a71bcb9f5e8337c2765ea018 112 Gene3D G3DSA:2.40.50.140 1 112 3.5E-28 T 11-10-2018 AMS64_07680 e1fe3ffb26c6fdecca1db81614e1c67e 262 Pfam PF01311 Bacterial export proteins, family 1 11 244 9.2E-53 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_07680 e1fe3ffb26c6fdecca1db81614e1c67e 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 2.4E-28 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_07680 e1fe3ffb26c6fdecca1db81614e1c67e 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 2.4E-28 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_07680 e1fe3ffb26c6fdecca1db81614e1c67e 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 2.4E-28 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_07680 e1fe3ffb26c6fdecca1db81614e1c67e 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 2.4E-28 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_07680 e1fe3ffb26c6fdecca1db81614e1c67e 262 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 4 256 6.4E-82 T 11-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 AMS64_00405 fd4409f893d6d12056aeb1d9985bf5f7 257 Gene3D G3DSA:3.40.50.1820 1 256 3.1E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_00405 fd4409f893d6d12056aeb1d9985bf5f7 257 Pfam PF00561 alpha/beta hydrolase fold 27 133 4.9E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_00405 fd4409f893d6d12056aeb1d9985bf5f7 257 SUPERFAMILY SSF53474 7 254 4.69E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_03710 8d0e7b75c678490f62fd88047a8a410f 1027 Gene3D G3DSA:3.40.710.10 809 958 1.1E-15 T 11-10-2018 AMS64_03710 8d0e7b75c678490f62fd88047a8a410f 1027 Gene3D G3DSA:1.10.3810.10 148 386 1.7E-7 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03710 8d0e7b75c678490f62fd88047a8a410f 1027 SUPERFAMILY SSF53955 164 384 4.5E-10 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_03710 8d0e7b75c678490f62fd88047a8a410f 1027 Pfam PF00912 Transglycosylase 155 352 1.2E-24 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03710 8d0e7b75c678490f62fd88047a8a410f 1027 SUPERFAMILY SSF56601 573 1017 9.26E-31 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMS64_17800 0a19e263aa212c34d16b2c6cbe1102db 312 Gene3D G3DSA:3.40.190.10 168 269 6.0E-47 T 11-10-2018 AMS64_17800 0a19e263aa212c34d16b2c6cbe1102db 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.1E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_17800 0a19e263aa212c34d16b2c6cbe1102db 312 Gene3D G3DSA:3.40.190.10 96 294 6.0E-47 T 11-10-2018 AMS64_17800 0a19e263aa212c34d16b2c6cbe1102db 312 SUPERFAMILY SSF53850 92 301 4.16E-37 T 11-10-2018 AMS64_17800 0a19e263aa212c34d16b2c6cbe1102db 312 Gene3D G3DSA:1.10.10.10 6 93 3.8E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_17800 0a19e263aa212c34d16b2c6cbe1102db 312 Pfam PF03466 LysR substrate binding domain 92 297 7.2E-34 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_17800 0a19e263aa212c34d16b2c6cbe1102db 312 SUPERFAMILY SSF46785 2 85 1.92E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_17180 2b090331c12c98878fff34836c8b3638 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 4.9E-69 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMS64_17180 2b090331c12c98878fff34836c8b3638 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 311 1.9E-134 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AMS64_17180 2b090331c12c98878fff34836c8b3638 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 7.1E-142 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AMS64_17180 2b090331c12c98878fff34836c8b3638 322 Gene3D G3DSA:3.40.50.1100 12 306 1.1E-124 T 11-10-2018 AMS64_17180 2b090331c12c98878fff34836c8b3638 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AMS64_17180 2b090331c12c98878fff34836c8b3638 322 Gene3D G3DSA:3.40.50.1100 43 145 1.1E-124 T 11-10-2018 AMS64_17180 2b090331c12c98878fff34836c8b3638 322 SUPERFAMILY SSF53686 4 308 4.58E-95 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMS64_10755 cb047d35c5705623893133191e226cc9 388 Pfam PF01844 HNH endonuclease 23 63 1.8E-8 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AMS64_10755 cb047d35c5705623893133191e226cc9 388 Gene3D G3DSA:3.30.40.60 1 85 1.8E-9 T 11-10-2018 AMS64_10755 cb047d35c5705623893133191e226cc9 388 SMART SM00507 10 63 1.1E-5 T 11-10-2018 IPR003615 HNH nuclease AMS64_10755 cb047d35c5705623893133191e226cc9 388 SUPERFAMILY SSF52980 77 188 5.15E-5 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMS64_01395 8c9fac8aeee1791b28e48b46334cd7f2 221 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 1 183 4.3E-46 T 11-10-2018 IPR002654 Glycosyl transferase, family 25 AMS64_17785 43f728288001a76dc9fe50b8ad7b9160 340 SMART SM00849 62 262 1.3E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_17785 43f728288001a76dc9fe50b8ad7b9160 340 SUPERFAMILY SSF56281 46 320 1.3E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_17785 43f728288001a76dc9fe50b8ad7b9160 340 Pfam PF12706 Beta-lactamase superfamily domain 93 286 4.4E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_17785 43f728288001a76dc9fe50b8ad7b9160 340 Gene3D G3DSA:3.60.15.10 46 329 2.9E-57 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_17330 a7091284aa21c9614e18cc39eb389568 499 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 68 206 2.3E-8 T 11-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 AMS64_17330 a7091284aa21c9614e18cc39eb389568 499 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 369 466 2.1E-5 T 11-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 AMS64_17330 a7091284aa21c9614e18cc39eb389568 499 SUPERFAMILY SSF53254 36 496 4.71E-43 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AMS64_17330 a7091284aa21c9614e18cc39eb389568 499 Gene3D G3DSA:3.40.50.1240 33 498 2.5E-78 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AMS64_03410 71031ecf7d06a1574bbb291a172c3ad0 202 Gene3D G3DSA:1.10.10.60 2 59 3.1E-21 T 11-10-2018 AMS64_03410 71031ecf7d06a1574bbb291a172c3ad0 202 SUPERFAMILY SSF46689 3 61 4.57E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_03410 71031ecf7d06a1574bbb291a172c3ad0 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.2E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_03410 71031ecf7d06a1574bbb291a172c3ad0 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.2E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_03410 71031ecf7d06a1574bbb291a172c3ad0 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 1.0E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_03410 71031ecf7d06a1574bbb291a172c3ad0 202 Gene3D G3DSA:1.10.357.10 63 201 3.5E-24 T 11-10-2018 AMS64_03410 71031ecf7d06a1574bbb291a172c3ad0 202 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 143 196 8.1E-6 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type AMS64_11090 c78d88ca970a789fca6e82bf2b2944f1 434 SUPERFAMILY SSF53613 36 417 1.56E-44 T 11-10-2018 IPR029056 Ribokinase-like AMS64_11090 c78d88ca970a789fca6e82bf2b2944f1 434 Pfam PF00294 pfkB family carbohydrate kinase 75 302 1.3E-9 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AMS64_17305 f22e445bbf417fabfc60555948f35dfd 202 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 32 160 1.8E-16 T 11-10-2018 AMS64_17305 f22e445bbf417fabfc60555948f35dfd 202 Gene3D G3DSA:3.40.50.720 1 201 2.4E-37 T 11-10-2018 AMS64_17305 f22e445bbf417fabfc60555948f35dfd 202 SUPERFAMILY SSF51735 2 201 9.61E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_17305 f22e445bbf417fabfc60555948f35dfd 202 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.9E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_17305 f22e445bbf417fabfc60555948f35dfd 202 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 56 67 4.9E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_17305 f22e445bbf417fabfc60555948f35dfd 202 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 146 4.9E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_17305 f22e445bbf417fabfc60555948f35dfd 202 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 164 4.9E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10945 3032a5b7126c055c010c4928a64fb1d3 90 SUPERFAMILY SSF54403 7 85 5.95E-10 T 11-10-2018 AMS64_10945 3032a5b7126c055c010c4928a64fb1d3 90 Gene3D G3DSA:3.10.450.10 6 89 1.1E-5 T 11-10-2018 AMS64_04220 d0f78293d4444d204f5047533f665fbc 128 Gene3D G3DSA:2.40.50.200 14 117 2.8E-33 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AMS64_04220 d0f78293d4444d204f5047533f665fbc 128 Pfam PF04076 Bacterial OB fold (BOF) protein 24 114 1.5E-27 T 11-10-2018 IPR005220 Bacterial OB-fold AMS64_04220 d0f78293d4444d204f5047533f665fbc 128 SUPERFAMILY SSF101756 13 114 2.09E-32 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AMS64_19110 9b282c00fe550c4ed2997487d31d3703 605 PIRSF PIRSF002741 12 559 2.9E-81 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMS64_19110 9b282c00fe550c4ed2997487d31d3703 605 Gene3D G3DSA:3.40.190.10 18 315 1.3E-48 T 11-10-2018 AMS64_19110 9b282c00fe550c4ed2997487d31d3703 605 Gene3D G3DSA:3.10.105.10 316 528 3.1E-38 T 11-10-2018 AMS64_19110 9b282c00fe550c4ed2997487d31d3703 605 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 476 4.1E-63 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AMS64_19110 9b282c00fe550c4ed2997487d31d3703 605 SUPERFAMILY SSF53850 47 559 8.28E-99 T 11-10-2018 AMS64_00165 165822eb4960b2a8cfeecc4757708247 169 Gene3D G3DSA:3.40.50.7700 1 168 2.3E-69 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AMS64_00165 165822eb4960b2a8cfeecc4757708247 169 PIRSF PIRSF001338 2 167 5.2E-61 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AMS64_00165 165822eb4960b2a8cfeecc4757708247 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 162 6.0E-59 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMS64_00165 165822eb4960b2a8cfeecc4757708247 169 Pfam PF00731 AIR carboxylase 7 157 3.8E-60 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMS64_00165 165822eb4960b2a8cfeecc4757708247 169 SUPERFAMILY SSF52255 4 160 1.44E-61 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AMS64_00165 165822eb4960b2a8cfeecc4757708247 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 7 160 30.21 T 11-10-2018 IPR033747 Class I PurE AMS64_00165 165822eb4960b2a8cfeecc4757708247 169 SMART SM01001 5 160 4.4E-95 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMS64_16145 7ab35e8298328043171dfd5fd9bbc0f8 556 SUPERFAMILY SSF55874 422 552 1.54E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_16145 7ab35e8298328043171dfd5fd9bbc0f8 556 Pfam PF06580 Histidine kinase 367 444 1.3E-25 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AMS64_16145 7ab35e8298328043171dfd5fd9bbc0f8 556 SUPERFAMILY SSF55781 227 351 1.08E-7 T 11-10-2018 AMS64_16145 7ab35e8298328043171dfd5fd9bbc0f8 556 Pfam PF07694 5TMR of 5TMR-LYT 26 193 6.1E-59 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AMS64_16145 7ab35e8298328043171dfd5fd9bbc0f8 556 SMART SM00065 224 361 0.0017 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_16145 7ab35e8298328043171dfd5fd9bbc0f8 556 Gene3D G3DSA:3.30.565.10 417 555 1.8E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_19795 1263b83ecce9c75d44b38a493eb58c63 158 Pfam PF04186 FxsA cytoplasmic membrane protein 7 109 4.7E-32 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AMS64_15840 bb51c960b21ee89978f076ce57cd5366 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 86 459 2.6E-75 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AMS64_15840 bb51c960b21ee89978f076ce57cd5366 545 Gene3D G3DSA:3.40.190.10 45 525 1.6E-150 T 11-10-2018 AMS64_15840 bb51c960b21ee89978f076ce57cd5366 545 Gene3D G3DSA:3.10.105.10 301 514 1.6E-150 T 11-10-2018 AMS64_15840 bb51c960b21ee89978f076ce57cd5366 545 Gene3D G3DSA:3.90.76.10 75 199 1.6E-150 T 11-10-2018 AMS64_15840 bb51c960b21ee89978f076ce57cd5366 545 SUPERFAMILY SSF53850 39 530 6.7E-124 T 11-10-2018 AMS64_15840 bb51c960b21ee89978f076ce57cd5366 545 PIRSF PIRSF002741 10 545 6.2E-97 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMS64_07615 d56607360e73d712084f1989f5c3dd79 468 SUPERFAMILY SSF103473 17 450 7.32E-57 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_07615 d56607360e73d712084f1989f5c3dd79 468 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 4.1E-135 T 11-10-2018 AMS64_07615 d56607360e73d712084f1989f5c3dd79 468 Gene3D G3DSA:1.20.1250.20 246 460 4.4E-34 T 11-10-2018 AMS64_07615 d56607360e73d712084f1989f5c3dd79 468 Gene3D G3DSA:1.20.1250.20 29 230 3.4E-34 T 11-10-2018 AMS64_07615 d56607360e73d712084f1989f5c3dd79 468 PIRSF PIRSF002808 11 460 9.6E-101 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AMS64_07615 d56607360e73d712084f1989f5c3dd79 468 Pfam PF07690 Major Facilitator Superfamily 35 390 9.4E-34 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_20170 ce53ba6952c34ef33d2017dbbab66ae3 134 SUPERFAMILY SSF54523 8 122 2.41E-23 T 11-10-2018 AMS64_20170 ce53ba6952c34ef33d2017dbbab66ae3 134 Gene3D G3DSA:3.30.700.10 8 133 1.2E-20 T 11-10-2018 AMS64_20170 ce53ba6952c34ef33d2017dbbab66ae3 134 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 5.9E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_20170 ce53ba6952c34ef33d2017dbbab66ae3 134 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 28 2.1E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_20170 ce53ba6952c34ef33d2017dbbab66ae3 134 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 29 114 4.3E-18 T 11-10-2018 IPR031982 Type IV minor pilin ComP AMS64_20170 ce53ba6952c34ef33d2017dbbab66ae3 134 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_02345 ce287f6d3bbd6c2eeec57825bfe208db 151 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 135 3.9E-39 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AMS64_02345 ce287f6d3bbd6c2eeec57825bfe208db 151 SUPERFAMILY SSF102400 1 140 1.57E-38 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AMS64_02345 ce287f6d3bbd6c2eeec57825bfe208db 151 Gene3D G3DSA:3.40.50.10110 1 139 1.2E-46 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AMS64_04735 846123c06c24b93a99aff6fa04e7e25d 196 Pfam PF10986 Protein of unknown function (DUF2796) 28 192 1.2E-54 T 11-10-2018 IPR021253 Protein of unknown function DUF2796 AMS64_04590 50eb9f42e1a820987424bfebf7181821 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 266 1.8E-56 T 11-10-2018 AMS64_04590 50eb9f42e1a820987424bfebf7181821 272 Gene3D G3DSA:3.40.50.1000 5 266 5.3E-61 T 11-10-2018 IPR023214 HAD superfamily AMS64_04590 50eb9f42e1a820987424bfebf7181821 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 76 1.2E-12 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AMS64_04590 50eb9f42e1a820987424bfebf7181821 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 266 7.2E-56 T 11-10-2018 IPR000150 Cof family GO:0016787 AMS64_04590 50eb9f42e1a820987424bfebf7181821 272 SUPERFAMILY SSF56784 2 271 1.07E-63 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_04590 50eb9f42e1a820987424bfebf7181821 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 6 17 - T 11-10-2018 AMS64_04590 50eb9f42e1a820987424bfebf7181821 272 Gene3D G3DSA:3.30.1240.10 85 195 5.3E-61 T 11-10-2018 AMS64_10335 e87609163dacd2878e888e53c7bdb182 262 Gene3D G3DSA:3.40.50.300 4 257 5.4E-48 T 11-10-2018 AMS64_10335 e87609163dacd2878e888e53c7bdb182 262 Pfam PF00005 ABC transporter 26 175 1.7E-17 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_10335 e87609163dacd2878e888e53c7bdb182 262 SUPERFAMILY SSF52540 22 235 2.47E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10335 e87609163dacd2878e888e53c7bdb182 262 SMART SM00382 35 222 6.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_19340 513071b876bcd75dd2b36ee3747c3afb 120 SUPERFAMILY SSF110069 5 120 4.05E-40 T 11-10-2018 IPR036767 ApaG domain superfamily AMS64_19340 513071b876bcd75dd2b36ee3747c3afb 120 Gene3D G3DSA:2.60.40.1470 2 120 3.8E-38 T 11-10-2018 IPR036767 ApaG domain superfamily AMS64_19340 513071b876bcd75dd2b36ee3747c3afb 120 Pfam PF04379 ApaG domain 18 97 6.6E-29 T 11-10-2018 IPR007474 ApaG domain AMS64_07985 59aab5cecad8fa1f8320b3c22efb835f 134 Pfam PF04024 PspC domain 9 66 1.5E-17 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AMS64_07985 59aab5cecad8fa1f8320b3c22efb835f 134 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 9 134 6.2E-45 T 11-10-2018 IPR014320 Phage shock protein, PspC AMS64_07870 36f2100b09d89e1f7221d42516a65a12 181 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 79 181 2.6E-5 T 11-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AMS64_07870 36f2100b09d89e1f7221d42516a65a12 181 Pfam PF13505 Outer membrane protein beta-barrel domain 8 181 1.4E-8 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AMS64_07870 36f2100b09d89e1f7221d42516a65a12 181 Gene3D G3DSA:2.40.160.20 16 181 9.8E-14 T 11-10-2018 AMS64_07870 36f2100b09d89e1f7221d42516a65a12 181 SUPERFAMILY SSF56925 40 179 4.97E-8 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMS64_17445 01ceeea21c8fab7a17a8a56b45d3989e 373 SMART SM00267 189 363 6.9E-59 T 11-10-2018 IPR000160 GGDEF domain AMS64_17445 01ceeea21c8fab7a17a8a56b45d3989e 373 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 362 1.1E-44 T 11-10-2018 IPR000160 GGDEF domain AMS64_17445 01ceeea21c8fab7a17a8a56b45d3989e 373 Gene3D G3DSA:3.30.70.270 192 364 1.7E-52 T 11-10-2018 AMS64_17445 01ceeea21c8fab7a17a8a56b45d3989e 373 Pfam PF00990 Diguanylate cyclase, GGDEF domain 201 358 1.9E-44 T 11-10-2018 IPR000160 GGDEF domain AMS64_17445 01ceeea21c8fab7a17a8a56b45d3989e 373 SUPERFAMILY SSF55073 205 362 8.63E-47 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_02755 c1610cdd0d4bae8b27b49e9dbf1e185e 181 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 178 22.273 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AMS64_02755 c1610cdd0d4bae8b27b49e9dbf1e185e 181 PIRSF PIRSF016183 5 180 1.1E-61 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AMS64_02755 c1610cdd0d4bae8b27b49e9dbf1e185e 181 Pfam PF04751 Protein of unknown function (DUF615) 22 174 7.7E-55 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AMS64_02755 c1610cdd0d4bae8b27b49e9dbf1e185e 181 Gene3D G3DSA:1.10.60.30 31 107 1.1E-21 T 11-10-2018 AMS64_02755 c1610cdd0d4bae8b27b49e9dbf1e185e 181 SUPERFAMILY SSF158710 32 177 7.98E-50 T 11-10-2018 IPR023153 PSPTO4464-like domain superfamily AMS64_02755 c1610cdd0d4bae8b27b49e9dbf1e185e 181 Gene3D G3DSA:1.10.60.30 109 180 1.3E-27 T 11-10-2018 AMS64_04710 6ac4938f88ad5b30c636773ab3b3db80 545 SMART SM00283 260 521 1.8E-63 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_04710 6ac4938f88ad5b30c636773ab3b3db80 545 SUPERFAMILY SSF55785 20 115 8.9E-27 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_04710 6ac4938f88ad5b30c636773ab3b3db80 545 Gene3D G3DSA:1.10.287.950 231 531 5.5E-59 T 11-10-2018 AMS64_04710 6ac4938f88ad5b30c636773ab3b3db80 545 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 110 1.3E-12 T 11-10-2018 IPR000014 PAS domain AMS64_04710 6ac4938f88ad5b30c636773ab3b3db80 545 Pfam PF08447 PAS fold 31 115 1.9E-17 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AMS64_04710 6ac4938f88ad5b30c636773ab3b3db80 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 315 487 2.6E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_04710 6ac4938f88ad5b30c636773ab3b3db80 545 SUPERFAMILY SSF58104 266 522 2.49E-66 T 11-10-2018 AMS64_04710 6ac4938f88ad5b30c636773ab3b3db80 545 Gene3D G3DSA:3.30.450.20 11 141 4.8E-25 T 11-10-2018 AMS64_14425 11f360f9643f7fe267820737b3d8d49a 241 Gene3D G3DSA:3.10.310.50 20 164 2.8E-53 T 11-10-2018 AMS64_14425 11f360f9643f7fe267820737b3d8d49a 241 Pfam PF04536 TPM domain 32 155 1.0E-40 T 11-10-2018 IPR007621 TPM domain AMS64_05430 2ba4ff6ad08c520641803e897a432b84 302 Gene3D G3DSA:1.10.10.10 2 84 9.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_05430 2ba4ff6ad08c520641803e897a432b84 302 SUPERFAMILY SSF53850 91 301 1.09E-27 T 11-10-2018 AMS64_05430 2ba4ff6ad08c520641803e897a432b84 302 Gene3D G3DSA:3.40.190.290 94 282 1.1E-28 T 11-10-2018 AMS64_05430 2ba4ff6ad08c520641803e897a432b84 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.3E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_05430 2ba4ff6ad08c520641803e897a432b84 302 SUPERFAMILY SSF46785 4 87 5.99E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_05430 2ba4ff6ad08c520641803e897a432b84 302 Pfam PF03466 LysR substrate binding domain 89 299 1.7E-21 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_05430 2ba4ff6ad08c520641803e897a432b84 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.7E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_05430 2ba4ff6ad08c520641803e897a432b84 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.7E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_05430 2ba4ff6ad08c520641803e897a432b84 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.7E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_01590 8989af748d6c69d019d90d69a71d1602 337 Gene3D G3DSA:3.90.25.10 193 328 8.6E-142 T 11-10-2018 AMS64_01590 8989af748d6c69d019d90d69a71d1602 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 2.0E-59 T 11-10-2018 IPR016040 NAD(P)-binding domain AMS64_01590 8989af748d6c69d019d90d69a71d1602 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 2.9E-137 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AMS64_01590 8989af748d6c69d019d90d69a71d1602 337 SUPERFAMILY SSF51735 1 336 1.54E-94 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_01590 8989af748d6c69d019d90d69a71d1602 337 Gene3D G3DSA:3.40.50.720 3 273 8.6E-142 T 11-10-2018 AMS64_20270 f0523e54c4619b487a20e8e23de32360 173 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 173 2.4E-57 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMS64_20270 f0523e54c4619b487a20e8e23de32360 173 Gene3D G3DSA:2.40.30.60 1 91 3.6E-30 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 AMS64_20270 f0523e54c4619b487a20e8e23de32360 173 SUPERFAMILY SSF50447 4 90 1.02E-22 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMS64_20270 f0523e54c4619b487a20e8e23de32360 173 Gene3D G3DSA:2.30.30.240 92 173 7.7E-34 T 11-10-2018 AMS64_20270 f0523e54c4619b487a20e8e23de32360 173 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 173 24.001 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMS64_20270 f0523e54c4619b487a20e8e23de32360 173 Pfam PF05239 PRC-barrel domain 94 168 2.7E-13 T 11-10-2018 IPR027275 PRC-barrel domain AMS64_20270 f0523e54c4619b487a20e8e23de32360 173 Pfam PF01782 RimM N-terminal domain 7 87 6.2E-24 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 AMS64_20270 f0523e54c4619b487a20e8e23de32360 173 SUPERFAMILY SSF50346 97 173 1.51E-20 T 11-10-2018 IPR011033 PRC-barrel-like superfamily AMS64_04925 217c9fb972a9325ac994826860ab4b63 549 PIRSF PIRSF000076 1 549 1.2E-238 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AMS64_04925 217c9fb972a9325ac994826860ab4b63 549 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 547 5.3E-228 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AMS64_04925 217c9fb972a9325ac994826860ab4b63 549 Gene3D G3DSA:1.20.1270.20 148 231 3.8E-26 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AMS64_04925 217c9fb972a9325ac994826860ab4b63 549 Gene3D G3DSA:3.40.50.2030 379 547 2.9E-60 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AMS64_04925 217c9fb972a9325ac994826860ab4b63 549 Gene3D G3DSA:3.40.50.2030 233 378 3.4E-60 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AMS64_04925 217c9fb972a9325ac994826860ab4b63 549 Pfam PF03063 Prismane/CO dehydrogenase family 1 543 8.3E-162 T 11-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 AMS64_04925 217c9fb972a9325ac994826860ab4b63 549 SUPERFAMILY SSF56821 1 547 2.35E-190 T 11-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 AMS64_04925 217c9fb972a9325ac994826860ab4b63 549 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 548 20.822 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AMS64_04925 217c9fb972a9325ac994826860ab4b63 549 Gene3D G3DSA:1.20.1270.20 1 137 7.5E-39 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AMS64_06290 f5c7117752ad6a591636b057b30a4b4d 199 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 4 197 4.0E-91 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AMS64_06290 f5c7117752ad6a591636b057b30a4b4d 199 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 197 3.8E-54 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMS64_06290 f5c7117752ad6a591636b057b30a4b4d 199 PIRSF PIRSF006102 1 199 1.4E-57 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMS64_06290 f5c7117752ad6a591636b057b30a4b4d 199 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 199 27.363 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AMS64_00940 b70e525421832cb23300d1be7ee4529f 645 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 37 92 2.3E-6 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AMS64_00940 b70e525421832cb23300d1be7ee4529f 645 Pfam PF00501 AMP-binding enzyme 95 519 9.9E-52 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMS64_00940 b70e525421832cb23300d1be7ee4529f 645 SUPERFAMILY SSF56801 21 637 5.1E-130 T 11-10-2018 AMS64_00940 b70e525421832cb23300d1be7ee4529f 645 ProSitePatterns PS00455 Putative AMP-binding domain signature. 263 274 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMS64_00940 b70e525421832cb23300d1be7ee4529f 645 Gene3D G3DSA:3.40.50.12780 67 515 4.2E-62 T 11-10-2018 AMS64_00940 b70e525421832cb23300d1be7ee4529f 645 Gene3D G3DSA:3.30.300.30 519 643 5.3E-18 T 11-10-2018 AMS64_00940 b70e525421832cb23300d1be7ee4529f 645 Pfam PF13193 AMP-binding enzyme C-terminal domain 537 607 5.8E-7 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMS64_00940 b70e525421832cb23300d1be7ee4529f 645 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 643 1.4E-272 T 11-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 AMS64_05390 5b9cdf03fa0388fdb8c0912313720eab 437 SUPERFAMILY SSF51905 39 428 1.09E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_05390 5b9cdf03fa0388fdb8c0912313720eab 437 Gene3D G3DSA:3.50.50.60 40 395 2.2E-70 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_05390 5b9cdf03fa0388fdb8c0912313720eab 437 Pfam PF01266 FAD dependent oxidoreductase 40 393 1.7E-50 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMS64_05390 5b9cdf03fa0388fdb8c0912313720eab 437 Gene3D G3DSA:3.30.9.10 132 354 2.2E-70 T 11-10-2018 AMS64_08310 562714782c888549b3e3c9d2e9aaea52 380 PIRSF PIRSF000524 8 375 2.3E-59 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AMS64_08310 562714782c888549b3e3c9d2e9aaea52 380 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 380 195.889 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AMS64_08310 562714782c888549b3e3c9d2e9aaea52 380 SUPERFAMILY SSF53383 13 372 1.16E-82 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_08310 562714782c888549b3e3c9d2e9aaea52 380 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 14 371 7.1E-151 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AMS64_08310 562714782c888549b3e3c9d2e9aaea52 380 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 12 376 1.0E-172 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AMS64_08310 562714782c888549b3e3c9d2e9aaea52 380 Pfam PF00266 Aminotransferase class-V 65 320 2.6E-26 T 11-10-2018 IPR000192 Aminotransferase class V domain AMS64_08310 562714782c888549b3e3c9d2e9aaea52 380 Gene3D G3DSA:3.40.640.10 24 273 2.5E-119 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_08310 562714782c888549b3e3c9d2e9aaea52 380 Gene3D G3DSA:3.90.1150.10 16 363 2.5E-119 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_21645 2a348465f0e7db056609cf5296ff49dd 372 PRINTS PR00075 Fatty acid desaturase family 1 signature 229 243 2.7E-34 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AMS64_21645 2a348465f0e7db056609cf5296ff49dd 372 PRINTS PR00075 Fatty acid desaturase family 1 signature 186 207 2.7E-34 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AMS64_21645 2a348465f0e7db056609cf5296ff49dd 372 PRINTS PR00075 Fatty acid desaturase family 1 signature 96 125 2.7E-34 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AMS64_21645 2a348465f0e7db056609cf5296ff49dd 372 PRINTS PR00075 Fatty acid desaturase family 1 signature 58 78 2.7E-34 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AMS64_21645 2a348465f0e7db056609cf5296ff49dd 372 PRINTS PR00075 Fatty acid desaturase family 1 signature 155 173 2.7E-34 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AMS64_21645 2a348465f0e7db056609cf5296ff49dd 372 PRINTS PR00075 Fatty acid desaturase family 1 signature 35 57 2.7E-34 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AMS64_21645 2a348465f0e7db056609cf5296ff49dd 372 PIRSF PIRSF000345 6 321 7.7E-104 T 11-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 AMS64_21645 2a348465f0e7db056609cf5296ff49dd 372 Pfam PF00487 Fatty acid desaturase 38 260 4.2E-22 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AMS64_04180 8afe7482f3d20b5847182d43ae51b7fd 193 Gene3D G3DSA:1.20.1590.10 2 193 1.2E-65 T 11-10-2018 IPR023381 YP001051499.1-like domain superfamily AMS64_04180 8afe7482f3d20b5847182d43ae51b7fd 193 Pfam PF04222 Protein of unknown function (DUF416) 6 190 4.0E-67 T 11-10-2018 IPR007338 Protein of unknown function DUF416 AMS64_01250 ec4200f4e5cb5ba807248d6d3ecf87d1 208 Gene3D G3DSA:3.40.30.10 39 191 2.7E-43 T 11-10-2018 AMS64_01250 ec4200f4e5cb5ba807248d6d3ecf87d1 208 SUPERFAMILY SSF52833 38 187 1.51E-44 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_01250 ec4200f4e5cb5ba807248d6d3ecf87d1 208 Pfam PF02630 SCO1/SenC 9 177 1.4E-28 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMS64_18055 aae730c10a7cd3bdfcb46141c0e3ceb5 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 57.292 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AMS64_18055 aae730c10a7cd3bdfcb46141c0e3ceb5 275 Gene3D G3DSA:2.160.10.10 87 257 2.0E-56 T 11-10-2018 AMS64_18055 aae730c10a7cd3bdfcb46141c0e3ceb5 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 2.0E-12 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_18055 aae730c10a7cd3bdfcb46141c0e3ceb5 275 SUPERFAMILY SSF51161 1 256 2.5E-77 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_18055 aae730c10a7cd3bdfcb46141c0e3ceb5 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMS64_18055 aae730c10a7cd3bdfcb46141c0e3ceb5 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 5.3E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_18055 aae730c10a7cd3bdfcb46141c0e3ceb5 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 3.6E-149 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AMS64_18055 aae730c10a7cd3bdfcb46141c0e3ceb5 275 Gene3D G3DSA:1.10.166.10 1 70 5.3E-31 T 11-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 AMS64_18055 aae730c10a7cd3bdfcb46141c0e3ceb5 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 2.4E-25 T 11-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AMS64_06880 030aab17290e0931a6de561af82ab9cb 178 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 42 173 1.4E-39 T 11-10-2018 IPR005247 YbhB/YbcL AMS64_06880 030aab17290e0931a6de561af82ab9cb 178 Pfam PF01161 Phosphatidylethanolamine-binding protein 40 175 1.0E-34 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein AMS64_06880 030aab17290e0931a6de561af82ab9cb 178 Gene3D G3DSA:3.90.280.10 15 176 5.1E-52 T 11-10-2018 IPR036610 PEBP-like superfamily AMS64_06880 030aab17290e0931a6de561af82ab9cb 178 SUPERFAMILY SSF49777 23 176 5.23E-48 T 11-10-2018 IPR036610 PEBP-like superfamily AMS64_12980 6bf723a70d8ad0fd6652a325898812a7 219 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 217 35.176 T 11-10-2018 IPR007432 Protein of unknown function DUF480 AMS64_12980 6bf723a70d8ad0fd6652a325898812a7 219 Gene3D G3DSA:1.10.10.10 95 173 3.7E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_12980 6bf723a70d8ad0fd6652a325898812a7 219 SUPERFAMILY SSF46785 90 172 6.26E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_12980 6bf723a70d8ad0fd6652a325898812a7 219 Gene3D G3DSA:1.10.10.10 1 89 7.3E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_12980 6bf723a70d8ad0fd6652a325898812a7 219 Pfam PF04337 Protein of unknown function, DUF480 6 156 7.0E-62 T 11-10-2018 IPR007432 Protein of unknown function DUF480 AMS64_12980 6bf723a70d8ad0fd6652a325898812a7 219 SUPERFAMILY SSF46785 3 84 1.22E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_10520 584a147ec0644a105957fbc2709dae25 116 SUPERFAMILY SSF50891 1 115 9.48E-29 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AMS64_10520 584a147ec0644a105957fbc2709dae25 116 Pfam PF04126 Cyclophilin-like 1 104 3.4E-4 T 11-10-2018 IPR025658 Cyclophilin TM1367-like domain AMS64_10520 584a147ec0644a105957fbc2709dae25 116 Gene3D G3DSA:2.40.100.20 1 114 6.4E-17 T 11-10-2018 AMS64_01525 0f94e0099f8786b50e6c243598f882c4 105 SUPERFAMILY SSF50022 3 105 1.37E-35 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMS64_01525 0f94e0099f8786b50e6c243598f882c4 105 Gene3D G3DSA:2.102.10.10 1 105 3.6E-32 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMS64_01525 0f94e0099f8786b50e6c243598f882c4 105 Pfam PF13806 Rieske-like [2Fe-2S] domain 4 104 3.0E-37 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AMS64_01525 0f94e0099f8786b50e6c243598f882c4 105 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 104 1.6E-33 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AMS64_20650 1345efbf9a09c375167553baf3fb9bf8 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 268 8.5E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_20650 1345efbf9a09c375167553baf3fb9bf8 279 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 14 268 3.7E-93 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AMS64_20650 1345efbf9a09c375167553baf3fb9bf8 279 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 8 270 4.8E-121 T 11-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 AMS64_20650 1345efbf9a09c375167553baf3fb9bf8 279 SUPERFAMILY SSF161098 16 266 7.29E-56 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_20650 1345efbf9a09c375167553baf3fb9bf8 279 Gene3D G3DSA:1.10.3720.10 15 273 7.1E-68 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_19710 1f84ffb267120a87f20d42137ad3938c 96 SUPERFAMILY SSF141371 2 86 1.61E-14 T 11-10-2018 AMS64_19710 1f84ffb267120a87f20d42137ad3938c 96 Gene3D G3DSA:2.40.10.220 2 94 4.9E-13 T 11-10-2018 AMS64_19710 1f84ffb267120a87f20d42137ad3938c 96 Pfam PF07238 PilZ domain 7 93 5.1E-12 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AMS64_02070 67e6372bde7813276bb06b632a820b3d 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.2E-55 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_02070 67e6372bde7813276bb06b632a820b3d 129 SUPERFAMILY SSF53137 15 129 7.85E-48 T 11-10-2018 AMS64_02070 67e6372bde7813276bb06b632a820b3d 129 Gene3D G3DSA:3.30.420.80 1 129 7.5E-58 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 AMS64_02070 67e6372bde7813276bb06b632a820b3d 129 PIRSF PIRSF002131 1 129 1.1E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMS64_02070 67e6372bde7813276bb06b632a820b3d 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site AMS64_02070 67e6372bde7813276bb06b632a820b3d 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.777 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMS64_02070 67e6372bde7813276bb06b632a820b3d 129 Pfam PF00411 Ribosomal protein S11 19 128 1.0E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMS64_22340 4dfb5e6791bb26e761b98b2722dc49f4 363 SUPERFAMILY SSF54106 33 80 1.44E-7 T 11-10-2018 AMS64_22340 4dfb5e6791bb26e761b98b2722dc49f4 363 SMART SM00257 33 81 0.001 T 11-10-2018 IPR018392 LysM domain AMS64_22340 4dfb5e6791bb26e761b98b2722dc49f4 363 Gene3D G3DSA:3.10.350.10 32 79 5.7E-14 T 11-10-2018 IPR036779 LysM domain superfamily AMS64_22340 4dfb5e6791bb26e761b98b2722dc49f4 363 Pfam PF01476 LysM domain 34 80 3.1E-14 T 11-10-2018 IPR018392 LysM domain AMS64_16045 b56ba2074d53752886fd618f725a1a83 544 SUPERFAMILY SSF161098 285 530 5.33E-19 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_16045 b56ba2074d53752886fd618f725a1a83 544 SUPERFAMILY SSF161098 4 256 7.33E-18 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_16045 b56ba2074d53752886fd618f725a1a83 544 Gene3D G3DSA:1.10.3720.10 281 534 5.1E-16 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_16045 b56ba2074d53752886fd618f725a1a83 544 Gene3D G3DSA:1.10.3720.10 1 265 6.3E-16 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_08145 b979dd0b84684bd8a8faddd504dcec54 161 SUPERFAMILY SSF52540 29 134 7.96E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08145 b979dd0b84684bd8a8faddd504dcec54 161 Gene3D G3DSA:3.40.50.300 28 138 1.1E-15 T 11-10-2018 AMS64_17820 cacce800bc36bb1f65d0e5b08ab3365f 311 Pfam PF03466 LysR substrate binding domain 87 293 8.4E-36 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_17820 cacce800bc36bb1f65d0e5b08ab3365f 311 SUPERFAMILY SSF53850 88 293 5.25E-33 T 11-10-2018 AMS64_17820 cacce800bc36bb1f65d0e5b08ab3365f 311 Gene3D G3DSA:3.40.190.10 91 287 5.1E-56 T 11-10-2018 AMS64_17820 cacce800bc36bb1f65d0e5b08ab3365f 311 SUPERFAMILY SSF46785 1 85 1.6E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_17820 cacce800bc36bb1f65d0e5b08ab3365f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_17820 cacce800bc36bb1f65d0e5b08ab3365f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_17820 cacce800bc36bb1f65d0e5b08ab3365f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_17820 cacce800bc36bb1f65d0e5b08ab3365f 311 Gene3D G3DSA:1.10.10.10 1 90 4.5E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_17820 cacce800bc36bb1f65d0e5b08ab3365f 311 Gene3D G3DSA:3.40.190.10 164 269 5.1E-56 T 11-10-2018 AMS64_17820 cacce800bc36bb1f65d0e5b08ab3365f 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_03820 a308a80bce297caa8abfa890c7799fe9 68 Gene3D G3DSA:1.10.10.1100 1 57 1.5E-21 T 11-10-2018 AMS64_03820 a308a80bce297caa8abfa890c7799fe9 68 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 2.1E-13 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AMS64_01735 8517d5bb86ac8f90f9b9eb724f478bc3 154 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 24 152 8.4E-19 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AMS64_01735 8517d5bb86ac8f90f9b9eb724f478bc3 154 SUPERFAMILY SSF54637 3 153 1.41E-28 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_01735 8517d5bb86ac8f90f9b9eb724f478bc3 154 Pfam PF03061 Thioesterase superfamily 55 143 2.5E-16 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMS64_01735 8517d5bb86ac8f90f9b9eb724f478bc3 154 Gene3D G3DSA:3.10.129.10 1 154 3.2E-57 T 11-10-2018 AMS64_14400 3530155b9d6b8667f37edc7efbd7e75e 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 261 1.9E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_14400 3530155b9d6b8667f37edc7efbd7e75e 265 SUPERFAMILY SSF161098 59 245 1.3E-38 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_14400 3530155b9d6b8667f37edc7efbd7e75e 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 4.1E-18 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMS64_14400 3530155b9d6b8667f37edc7efbd7e75e 265 Gene3D G3DSA:1.10.3720.10 49 261 3.7E-47 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_21730 5354d918367da87b60662894dbe6694c 238 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 139 2.0E-37 T 11-10-2018 IPR013559 YheO-like AMS64_21730 5354d918367da87b60662894dbe6694c 238 Pfam PF13309 HTH domain 171 228 1.4E-17 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain AMS64_21730 5354d918367da87b60662894dbe6694c 238 Pfam PF08348 YheO-like PAS domain 28 136 1.3E-36 T 11-10-2018 IPR013559 YheO-like AMS64_11985 aff0ab743a2ef76e68084829a27d5c58 437 Gene3D G3DSA:1.10.150.130 96 211 2.2E-30 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_11985 aff0ab743a2ef76e68084829a27d5c58 437 Gene3D G3DSA:1.10.443.10 220 399 5.7E-14 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_11985 aff0ab743a2ef76e68084829a27d5c58 437 Gene3D G3DSA:3.30.160.390 6 94 1.2E-27 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AMS64_11985 aff0ab743a2ef76e68084829a27d5c58 437 Pfam PF00589 Phage integrase family 217 391 3.0E-17 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_11985 aff0ab743a2ef76e68084829a27d5c58 437 Pfam PF13356 Arm DNA-binding domain 8 93 1.2E-16 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AMS64_11985 aff0ab743a2ef76e68084829a27d5c58 437 SUPERFAMILY SSF56349 105 394 2.5E-50 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_11005 e23b3691cbb70d86752b32c3a45d9a81 453 Pfam PF04055 Radical SAM superfamily 60 226 1.0E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_11005 e23b3691cbb70d86752b32c3a45d9a81 453 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 18 431 6.2E-162 T 11-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW AMS64_11005 e23b3691cbb70d86752b32c3a45d9a81 453 SUPERFAMILY SSF102114 53 428 7.32E-71 T 11-10-2018 AMS64_11005 e23b3691cbb70d86752b32c3a45d9a81 453 Gene3D G3DSA:3.80.30.20 27 353 1.9E-68 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMS64_11005 e23b3691cbb70d86752b32c3a45d9a81 453 SMART SM00729 55 274 6.2E-34 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMS64_15080 1fb1ad74364b233428fb674d1f874f8b 140 Pfam PF02561 Flagellar protein FliS 7 122 1.3E-29 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AMS64_15080 1fb1ad74364b233428fb674d1f874f8b 140 SUPERFAMILY SSF101116 8 127 3.53E-31 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 AMS64_15080 1fb1ad74364b233428fb674d1f874f8b 140 Gene3D G3DSA:1.20.120.340 1 126 1.2E-32 T 11-10-2018 AMS64_15080 1fb1ad74364b233428fb674d1f874f8b 140 TIGRFAM TIGR00208 fliS: flagellar protein FliS 2 122 1.5E-20 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AMS64_15080 1fb1ad74364b233428fb674d1f874f8b 140 PIRSF PIRSF039090 1 133 6.2E-41 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AMS64_06105 b0cb4539367ea87247fdb021ce457d34 399 Pfam PF03616 Sodium/glutamate symporter 2 366 3.3E-153 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AMS64_06105 b0cb4539367ea87247fdb021ce457d34 399 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.969 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AMS64_06105 b0cb4539367ea87247fdb021ce457d34 399 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 397 4.9E-177 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AMS64_10270 ccf2eb59b7c581f0f542ee454062ca88 271 Gene3D G3DSA:3.40.50.12280 17 188 1.6E-51 T 11-10-2018 AMS64_10270 ccf2eb59b7c581f0f542ee454062ca88 271 SUPERFAMILY SSF56770 40 172 4.19E-51 T 11-10-2018 AMS64_10270 ccf2eb59b7c581f0f542ee454062ca88 271 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 135 151 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10270 ccf2eb59b7c581f0f542ee454062ca88 271 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 52 160 6.6E-24 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_09005 d640d4b283059a0d11596125009b0c1d 507 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AMS64_09005 d640d4b283059a0d11596125009b0c1d 507 Pfam PF00860 Permease family 23 414 2.2E-100 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AMS64_09005 d640d4b283059a0d11596125009b0c1d 507 TIGRFAM TIGR03173 pbuX: xanthine permease 28 447 1.6E-127 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 AMS64_09005 d640d4b283059a0d11596125009b0c1d 507 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 19 445 5.9E-127 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AMS64_02670 3af6682474f619c8d81004911fd7f9c4 83 Pfam PF03692 Putative zinc- or iron-chelating domain 2 58 4.2E-5 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AMS64_18905 6aae5d4eb7ea94ef640f01d8d75f8b76 408 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 55 70 3.3E-16 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMS64_18905 6aae5d4eb7ea94ef640f01d8d75f8b76 408 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 120 134 3.3E-16 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMS64_18905 6aae5d4eb7ea94ef640f01d8d75f8b76 408 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 206 218 3.3E-16 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMS64_18905 6aae5d4eb7ea94ef640f01d8d75f8b76 408 Pfam PF00089 Trypsin 27 252 7.6E-35 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMS64_18905 6aae5d4eb7ea94ef640f01d8d75f8b76 408 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 65 70 - T 11-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AMS64_18905 6aae5d4eb7ea94ef640f01d8d75f8b76 408 SMART SM00020 26 252 7.4E-34 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMS64_18905 6aae5d4eb7ea94ef640f01d8d75f8b76 408 Gene3D G3DSA:2.40.10.10 142 246 1.7E-40 T 11-10-2018 AMS64_18905 6aae5d4eb7ea94ef640f01d8d75f8b76 408 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 387 408 7.7E-4 T 11-10-2018 IPR020008 GlyGly-CTERM domain AMS64_18905 6aae5d4eb7ea94ef640f01d8d75f8b76 408 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 207 218 - T 11-10-2018 IPR033116 Serine proteases, trypsin family, serine active site AMS64_18905 6aae5d4eb7ea94ef640f01d8d75f8b76 408 SUPERFAMILY SSF50494 25 255 3.57E-46 T 11-10-2018 IPR009003 Peptidase S1, PA clan AMS64_18905 6aae5d4eb7ea94ef640f01d8d75f8b76 408 Gene3D G3DSA:2.40.10.10 37 253 1.7E-40 T 11-10-2018 AMS64_12880 202fdf915bbed74552b479fbb2105769 250 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 104 112 - T 11-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 AMS64_12880 202fdf915bbed74552b479fbb2105769 250 SUPERFAMILY SSF54060 32 245 4.0E-64 T 11-10-2018 AMS64_12880 202fdf915bbed74552b479fbb2105769 250 SMART SM00477 45 236 3.5E-48 T 11-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 AMS64_12880 202fdf915bbed74552b479fbb2105769 250 Gene3D G3DSA:3.40.570.10 14 248 1.4E-69 T 11-10-2018 AMS64_12880 202fdf915bbed74552b479fbb2105769 250 Pfam PF01223 DNA/RNA non-specific endonuclease 29 235 3.7E-51 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AMS64_12880 202fdf915bbed74552b479fbb2105769 250 SMART SM00892 44 236 8.9E-63 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AMS64_07395 94d96364ba2e9ef1d615d3c2afcb962c 371 PIRSF PIRSF000876 1 371 1.7E-129 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMS64_07395 94d96364ba2e9ef1d615d3c2afcb962c 371 SUPERFAMILY SSF52738 181 366 7.32E-65 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AMS64_07395 94d96364ba2e9ef1d615d3c2afcb962c 371 Pfam PF01339 CheB methylesterase 186 365 3.3E-60 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMS64_07395 94d96364ba2e9ef1d615d3c2afcb962c 371 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 370 39.314 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMS64_07395 94d96364ba2e9ef1d615d3c2afcb962c 371 SUPERFAMILY SSF52172 3 109 1.28E-26 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_07395 94d96364ba2e9ef1d615d3c2afcb962c 371 SMART SM00448 3 126 2.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_07395 94d96364ba2e9ef1d615d3c2afcb962c 371 Gene3D G3DSA:3.40.50.180 177 370 1.2E-67 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AMS64_07395 94d96364ba2e9ef1d615d3c2afcb962c 371 Pfam PF00072 Response regulator receiver domain 5 109 3.1E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_07395 94d96364ba2e9ef1d615d3c2afcb962c 371 Gene3D G3DSA:3.40.50.2300 2 132 5.2E-31 T 11-10-2018 AMS64_20900 5c644c6a19411f593c5a1c4804199bf9 266 Gene3D G3DSA:3.40.630.30 13 255 1.2E-27 T 11-10-2018 AMS64_20900 5c644c6a19411f593c5a1c4804199bf9 266 Pfam PF13673 Acetyltransferase (GNAT) domain 158 253 3.7E-7 T 11-10-2018 IPR000182 GNAT domain AMS64_20900 5c644c6a19411f593c5a1c4804199bf9 266 SUPERFAMILY SSF55729 35 255 3.97E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_03375 22db80b18547a2ca0216057ef1f9dfc0 753 Gene3D G3DSA:3.40.1090.10 144 275 5.7E-16 T 11-10-2018 AMS64_03375 22db80b18547a2ca0216057ef1f9dfc0 753 Gene3D G3DSA:3.40.1090.10 16 128 3.6E-25 T 11-10-2018 AMS64_03375 22db80b18547a2ca0216057ef1f9dfc0 753 Pfam PF01734 Patatin-like phospholipase 36 226 5.2E-26 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMS64_03375 22db80b18547a2ca0216057ef1f9dfc0 753 SUPERFAMILY SSF52151 30 253 6.02E-48 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMS64_03375 22db80b18547a2ca0216057ef1f9dfc0 753 Gene3D G3DSA:3.10.20.310 342 412 1.8E-7 T 11-10-2018 AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 4.4E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.4E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 4.4E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 4.4E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 4.4E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 4.4E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 200 9.0E-5 T 11-10-2018 AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 SUPERFAMILY SSF51735 1 258 2.32E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 9.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 9.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 158 9.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 257 1.2E-48 T 11-10-2018 AMS64_10655 f442f33cff1fba040cfa860f2e8b479e 259 Gene3D G3DSA:3.40.50.720 1 259 1.1E-69 T 11-10-2018 AMS64_20275 d3a251396a883f4df60357be00d30ae8 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.547 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20275 d3a251396a883f4df60357be00d30ae8 82 SUPERFAMILY SSF54565 1 76 2.09E-27 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20275 d3a251396a883f4df60357be00d30ae8 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.8E-29 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20275 d3a251396a883f4df60357be00d30ae8 82 Gene3D G3DSA:3.30.1320.10 1 82 9.6E-30 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20275 d3a251396a883f4df60357be00d30ae8 82 Pfam PF00886 Ribosomal protein S16 8 68 4.0E-22 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_19605 b849988686abab962bf097f2ef48d46c 284 SMART SM00382 134 266 2.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_19605 b849988686abab962bf097f2ef48d46c 284 SUPERFAMILY SSF52540 96 257 6.83E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19605 b849988686abab962bf097f2ef48d46c 284 Gene3D G3DSA:3.40.50.300 79 262 2.0E-25 T 11-10-2018 AMS64_19605 b849988686abab962bf097f2ef48d46c 284 Pfam PF01695 IstB-like ATP binding protein 136 256 5.4E-13 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AMS64_07290 5789ac5d9580c2409a6039d1cb3f0886 569 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 23 566 7.0E-73 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_07290 5789ac5d9580c2409a6039d1cb3f0886 569 PIRSF PIRSF004862 20 569 6.4E-123 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_07290 5789ac5d9580c2409a6039d1cb3f0886 569 PRINTS PR01009 Flagellar M-ring protein signature 170 184 9.9E-22 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_07290 5789ac5d9580c2409a6039d1cb3f0886 569 PRINTS PR01009 Flagellar M-ring protein signature 212 230 9.9E-22 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_07290 5789ac5d9580c2409a6039d1cb3f0886 569 PRINTS PR01009 Flagellar M-ring protein signature 282 300 9.9E-22 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_07290 5789ac5d9580c2409a6039d1cb3f0886 569 PRINTS PR01009 Flagellar M-ring protein signature 362 386 9.9E-22 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_07290 5789ac5d9580c2409a6039d1cb3f0886 569 PRINTS PR01009 Flagellar M-ring protein signature 138 156 9.9E-22 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMS64_07290 5789ac5d9580c2409a6039d1cb3f0886 569 Pfam PF08345 Flagellar M-ring protein C-terminal 269 438 1.1E-44 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal AMS64_07290 5789ac5d9580c2409a6039d1cb3f0886 569 Gene3D G3DSA:3.30.300.30 139 237 4.0E-6 T 11-10-2018 AMS64_07290 5789ac5d9580c2409a6039d1cb3f0886 569 Pfam PF01514 Secretory protein of YscJ/FliF family 47 236 4.0E-48 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF AMS64_04885 a58b33f1d83622984af185efab5c83be 305 SMART SM00382 29 212 8.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_04885 a58b33f1d83622984af185efab5c83be 305 Pfam PF00005 ABC transporter 20 164 8.7E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_04885 a58b33f1d83622984af185efab5c83be 305 Gene3D G3DSA:3.40.50.300 1 232 1.1E-63 T 11-10-2018 AMS64_04885 a58b33f1d83622984af185efab5c83be 305 SUPERFAMILY SSF52540 3 230 6.82E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_04885 a58b33f1d83622984af185efab5c83be 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_21505 d0a47efd223a31bda20b45b30f4dcfbb 222 Gene3D G3DSA:3.40.50.300 1 221 6.1E-62 T 11-10-2018 AMS64_21505 d0a47efd223a31bda20b45b30f4dcfbb 222 SMART SM00382 27 214 1.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_21505 d0a47efd223a31bda20b45b30f4dcfbb 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_21505 d0a47efd223a31bda20b45b30f4dcfbb 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 8.8E-89 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AMS64_21505 d0a47efd223a31bda20b45b30f4dcfbb 222 Pfam PF00005 ABC transporter 18 165 2.0E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_21505 d0a47efd223a31bda20b45b30f4dcfbb 222 SUPERFAMILY SSF52540 1 219 1.06E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_19600 0c6129224fb07573b2240796c089760e 232 Gene3D G3DSA:1.10.8.1180 109 179 1.3E-17 T 11-10-2018 AMS64_12765 b67750e66e9578d00a29de2c121b9a02 539 PIRSF PIRSF002741 1 539 9.5E-121 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMS64_12765 b67750e66e9578d00a29de2c121b9a02 539 Gene3D G3DSA:3.40.190.10 41 521 1.4E-195 T 11-10-2018 AMS64_12765 b67750e66e9578d00a29de2c121b9a02 539 SUPERFAMILY SSF53850 38 535 1.96E-152 T 11-10-2018 AMS64_12765 b67750e66e9578d00a29de2c121b9a02 539 Gene3D G3DSA:3.90.76.10 70 193 1.4E-195 T 11-10-2018 AMS64_12765 b67750e66e9578d00a29de2c121b9a02 539 Gene3D G3DSA:3.10.105.10 295 509 1.4E-195 T 11-10-2018 AMS64_12765 b67750e66e9578d00a29de2c121b9a02 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 459 4.0E-90 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AMS64_04810 ae8e8ad5ace1a99d016360f78bb34744 149 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 26 148 29.815 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AMS64_04810 ae8e8ad5ace1a99d016360f78bb34744 149 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 112 136 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMS64_04810 ae8e8ad5ace1a99d016360f78bb34744 149 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 109 141 4.0E-10 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMS64_04810 ae8e8ad5ace1a99d016360f78bb34744 149 SUPERFAMILY SSF109635 8 108 6.02E-36 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily AMS64_04810 ae8e8ad5ace1a99d016360f78bb34744 149 Gene3D G3DSA:1.20.120.910 19 148 8.0E-35 T 11-10-2018 AMS64_04810 ae8e8ad5ace1a99d016360f78bb34744 149 SUPERFAMILY SSF57716 109 147 6.41E-10 T 11-10-2018 AMS64_04810 ae8e8ad5ace1a99d016360f78bb34744 149 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 30 138 5.8E-51 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AMS64_08625 bc9c31458ce3b14492c1cefc6ba54d0e 85 Pfam PF06803 Protein of unknown function (DUF1232) 28 63 9.6E-11 T 11-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 AMS64_05785 8bf6c4585e23a29bc20b7fa70d566043 464 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 19 456 1.8E-176 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AMS64_05785 8bf6c4585e23a29bc20b7fa70d566043 464 SUPERFAMILY SSF48024 17 128 1.96E-39 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 AMS64_05785 8bf6c4585e23a29bc20b7fa70d566043 464 Gene3D G3DSA:3.40.50.300 176 457 4.1E-104 T 11-10-2018 AMS64_05785 8bf6c4585e23a29bc20b7fa70d566043 464 Pfam PF00772 DnaB-like helicase N terminal domain 19 120 2.1E-37 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMS64_05785 8bf6c4585e23a29bc20b7fa70d566043 464 SUPERFAMILY SSF52540 196 447 4.3E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_05785 8bf6c4585e23a29bc20b7fa70d566043 464 Gene3D G3DSA:1.10.860.10 11 175 7.3E-57 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMS64_05785 8bf6c4585e23a29bc20b7fa70d566043 464 Pfam PF03796 DnaB-like helicase C terminal domain 198 454 8.9E-112 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AMS64_05785 8bf6c4585e23a29bc20b7fa70d566043 464 SMART SM00382 215 421 0.0046 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_04850 2915ccf9b22ceb405641fc9b65c1dfa5 241 Pfam PF00665 Integrase core domain 84 197 1.1E-24 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_04850 2915ccf9b22ceb405641fc9b65c1dfa5 241 SUPERFAMILY SSF53098 81 235 4.55E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_04850 2915ccf9b22ceb405641fc9b65c1dfa5 241 Gene3D G3DSA:3.30.420.10 80 237 2.1E-14 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_07710 d14d12c54402a327aa6c447167991ccc 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 3.9E-78 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_07710 d14d12c54402a327aa6c447167991ccc 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_07710 d14d12c54402a327aa6c447167991ccc 440 Gene3D G3DSA:3.40.50.12240 18 440 6.0E-151 T 11-10-2018 AMS64_07710 d14d12c54402a327aa6c447167991ccc 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 93 9.1E-10 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_07710 d14d12c54402a327aa6c447167991ccc 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 12 439 1.1E-170 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_07710 d14d12c54402a327aa6c447167991ccc 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 22 439 4.4E-197 T 11-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMS64_07710 d14d12c54402a327aa6c447167991ccc 440 SUPERFAMILY SSF52540 96 365 8.47E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07710 d14d12c54402a327aa6c447167991ccc 440 SMART SM00382 162 343 6.9E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_01900 4dcd6aa801b5759974862da7e0e2f3b2 192 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 181 4.0E-23 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMS64_01900 4dcd6aa801b5759974862da7e0e2f3b2 192 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 99 2.0E-10 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AMS64_01900 4dcd6aa801b5759974862da7e0e2f3b2 192 SUPERFAMILY SSF89360 1 97 2.16E-22 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMS64_01900 4dcd6aa801b5759974862da7e0e2f3b2 192 SUPERFAMILY SSF117916 95 184 1.16E-22 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMS64_01900 4dcd6aa801b5759974862da7e0e2f3b2 192 Pfam PF01106 NifU-like domain 111 174 3.2E-19 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMS64_01900 4dcd6aa801b5759974862da7e0e2f3b2 192 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 192 45.801 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AMS64_01900 4dcd6aa801b5759974862da7e0e2f3b2 192 Gene3D G3DSA:3.30.300.130 101 189 7.9E-20 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMS64_01900 4dcd6aa801b5759974862da7e0e2f3b2 192 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 192 2.0E-98 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AMS64_01900 4dcd6aa801b5759974862da7e0e2f3b2 192 Gene3D G3DSA:2.60.300.12 1 98 4.8E-14 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMS64_06595 a3d6214518ad06794dac1eca2cb485cf 172 Gene3D G3DSA:3.40.50.300 1 171 1.4E-55 T 11-10-2018 AMS64_06595 a3d6214518ad06794dac1eca2cb485cf 172 PRINTS PR01100 Shikimate kinase family signature 98 115 4.7E-28 T 11-10-2018 AMS64_06595 a3d6214518ad06794dac1eca2cb485cf 172 PRINTS PR01100 Shikimate kinase family signature 59 67 4.7E-28 T 11-10-2018 AMS64_06595 a3d6214518ad06794dac1eca2cb485cf 172 PRINTS PR01100 Shikimate kinase family signature 7 22 4.7E-28 T 11-10-2018 AMS64_06595 a3d6214518ad06794dac1eca2cb485cf 172 PRINTS PR01100 Shikimate kinase family signature 31 44 4.7E-28 T 11-10-2018 AMS64_06595 a3d6214518ad06794dac1eca2cb485cf 172 PRINTS PR01100 Shikimate kinase family signature 77 86 4.7E-28 T 11-10-2018 AMS64_06595 a3d6214518ad06794dac1eca2cb485cf 172 Pfam PF01202 Shikimate kinase 13 169 1.2E-54 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMS64_06595 a3d6214518ad06794dac1eca2cb485cf 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 28.361 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMS64_06595 a3d6214518ad06794dac1eca2cb485cf 172 SUPERFAMILY SSF52540 4 170 4.97E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_06595 a3d6214518ad06794dac1eca2cb485cf 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMS64_08215 2fa31520f61e3e6fd933b281dd42341e 130 Gene3D G3DSA:3.90.79.10 4 124 3.7E-18 T 11-10-2018 AMS64_08215 2fa31520f61e3e6fd933b281dd42341e 130 Pfam PF00293 NUDIX domain 13 120 4.9E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_08215 2fa31520f61e3e6fd933b281dd42341e 130 SUPERFAMILY SSF55811 7 123 1.49E-18 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_01570 98b85d33b3f94f20e36b0aa4a200be7f 271 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 262 1.1E-93 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMS64_01570 98b85d33b3f94f20e36b0aa4a200be7f 271 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 269 18.327 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMS64_01570 98b85d33b3f94f20e36b0aa4a200be7f 271 Pfam PF02673 Bacitracin resistance protein BacA 10 263 2.7E-85 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMS64_04770 6c05ef60a24017abb11d3c7e5e9772ed 293 Pfam PF03466 LysR substrate binding domain 100 285 2.6E-22 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_04770 6c05ef60a24017abb11d3c7e5e9772ed 293 Gene3D G3DSA:1.10.10.10 1 89 5.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_04770 6c05ef60a24017abb11d3c7e5e9772ed 293 SUPERFAMILY SSF53850 93 290 7.48E-27 T 11-10-2018 AMS64_04770 6c05ef60a24017abb11d3c7e5e9772ed 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.3E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04770 6c05ef60a24017abb11d3c7e5e9772ed 293 SUPERFAMILY SSF46785 1 86 1.79E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_04770 6c05ef60a24017abb11d3c7e5e9772ed 293 Gene3D G3DSA:3.40.190.290 92 287 7.5E-34 T 11-10-2018 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 Pfam PF00459 Inositol monophosphatase family 2 261 4.2E-72 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 4.1E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 4.1E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 4.1E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 4.1E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 4.1E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 4.1E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 Gene3D G3DSA:3.40.190.80 142 267 5.1E-39 T 11-10-2018 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 Gene3D G3DSA:3.30.540.10 1 140 2.7E-51 T 11-10-2018 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.0E-36 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.0E-36 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.0E-36 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.0E-36 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMS64_15010 ea37e4e38d23b7728423efb927406f5e 267 SUPERFAMILY SSF56655 1 261 9.03E-86 T 11-10-2018 AMS64_17465 857105cea007994317a803a798745190 388 Gene3D G3DSA:2.40.37.10 19 368 5.1E-108 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMS64_17465 857105cea007994317a803a798745190 388 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 265 2.9E-49 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AMS64_17465 857105cea007994317a803a798745190 388 SUPERFAMILY SSF50621 249 379 3.56E-33 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMS64_17465 857105cea007994317a803a798745190 388 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 208 225 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMS64_17465 857105cea007994317a803a798745190 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 72 84 5.2E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_17465 857105cea007994317a803a798745190 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 52 70 5.2E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_17465 857105cea007994317a803a798745190 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 174 187 5.2E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_17465 857105cea007994317a803a798745190 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 255 274 5.2E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_17465 857105cea007994317a803a798745190 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 354 367 5.2E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMS64_17465 857105cea007994317a803a798745190 388 PRINTS PR01182 Ornithine decarboxylase signature 124 146 2.4E-21 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMS64_17465 857105cea007994317a803a798745190 388 PRINTS PR01182 Ornithine decarboxylase signature 341 354 2.4E-21 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMS64_17465 857105cea007994317a803a798745190 388 PRINTS PR01182 Ornithine decarboxylase signature 321 331 2.4E-21 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMS64_17465 857105cea007994317a803a798745190 388 PRINTS PR01182 Ornithine decarboxylase signature 50 77 2.4E-21 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMS64_17465 857105cea007994317a803a798745190 388 PRINTS PR01182 Ornithine decarboxylase signature 94 118 2.4E-21 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMS64_17465 857105cea007994317a803a798745190 388 PRINTS PR01182 Ornithine decarboxylase signature 290 303 2.4E-21 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMS64_17465 857105cea007994317a803a798745190 388 PRINTS PR01182 Ornithine decarboxylase signature 24 48 2.4E-21 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMS64_17465 857105cea007994317a803a798745190 388 SUPERFAMILY SSF51419 30 267 3.36E-60 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_17465 857105cea007994317a803a798745190 388 Gene3D G3DSA:3.20.20.10 31 267 5.1E-108 T 11-10-2018 IPR029066 PLP-binding barrel AMS64_17465 857105cea007994317a803a798745190 388 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 266 354 1.8E-14 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AMS64_03245 a241ccfe71b1d97c41ec83dec1ef5c8e 393 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03245 a241ccfe71b1d97c41ec83dec1ef5c8e 393 Pfam PF01098 Cell cycle protein 28 381 1.0E-111 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03245 a241ccfe71b1d97c41ec83dec1ef5c8e 393 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 25 380 8.3E-127 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03245 a241ccfe71b1d97c41ec83dec1ef5c8e 393 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 23 390 41.401 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03975 bc4855d71b84140c63829f1543d84301 307 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 297 2.5E-79 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMS64_03975 bc4855d71b84140c63829f1543d84301 307 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 307 4.0E-123 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AMS64_03975 bc4855d71b84140c63829f1543d84301 307 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 307 49.619 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AMS64_03975 bc4855d71b84140c63829f1543d84301 307 PIRSF PIRSF026649 4 304 6.2E-89 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMS64_12700 7d96ca47dc0877f6b9435e5198f14d87 353 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 5.4E-163 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMS64_12700 7d96ca47dc0877f6b9435e5198f14d87 353 PIRSF PIRSF001361 1 352 2.2E-155 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMS64_12700 7d96ca47dc0877f6b9435e5198f14d87 353 Pfam PF00793 DAHP synthetase I family 44 338 1.1E-101 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMS64_12700 7d96ca47dc0877f6b9435e5198f14d87 353 Gene3D G3DSA:3.20.20.70 1 349 8.3E-153 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_12700 7d96ca47dc0877f6b9435e5198f14d87 353 SUPERFAMILY SSF51569 8 348 1.15E-133 T 11-10-2018 AMS64_13585 f7debed6d1614ef28117c161baaf87d2 416 Gene3D G3DSA:3.30.160.390 5 107 3.6E-32 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AMS64_13585 f7debed6d1614ef28117c161baaf87d2 416 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 107 157 9.8E-6 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMS64_13585 f7debed6d1614ef28117c161baaf87d2 416 Pfam PF00589 Phage integrase family 215 377 6.0E-21 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_13585 f7debed6d1614ef28117c161baaf87d2 416 Gene3D G3DSA:1.10.150.130 108 213 1.6E-32 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_13585 f7debed6d1614ef28117c161baaf87d2 416 SUPERFAMILY SSF56349 106 387 1.94E-61 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_13585 f7debed6d1614ef28117c161baaf87d2 416 Gene3D G3DSA:1.10.443.10 214 387 6.1E-18 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_13585 f7debed6d1614ef28117c161baaf87d2 416 Pfam PF13356 Arm DNA-binding domain 6 92 5.1E-20 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AMS64_16470 5e4c7fc7504d3e05bec7070347a275f4 336 Gene3D G3DSA:3.40.50.2300 160 335 1.0E-29 T 11-10-2018 AMS64_16470 5e4c7fc7504d3e05bec7070347a275f4 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 56 2.7E-15 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_16470 5e4c7fc7504d3e05bec7070347a275f4 336 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 70 239 1.3E-13 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AMS64_16470 5e4c7fc7504d3e05bec7070347a275f4 336 SMART SM00354 6 79 2.2E-25 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_16470 5e4c7fc7504d3e05bec7070347a275f4 336 Gene3D G3DSA:1.10.260.40 7 67 3.6E-21 T 11-10-2018 AMS64_16470 5e4c7fc7504d3e05bec7070347a275f4 336 SUPERFAMILY SSF47413 7 63 4.33E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_16470 5e4c7fc7504d3e05bec7070347a275f4 336 Gene3D G3DSA:3.40.50.2300 68 156 1.9E-20 T 11-10-2018 AMS64_16470 5e4c7fc7504d3e05bec7070347a275f4 336 SUPERFAMILY SSF53822 66 321 2.16E-46 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_11710 39f11db3f0751820c71f919299f9b04a 111 SMART SM01323 19 103 1.8E-37 T 11-10-2018 IPR003849 Preprotein translocase YajC AMS64_11710 39f11db3f0751820c71f919299f9b04a 111 Pfam PF02699 Preprotein translocase subunit 23 100 1.7E-25 T 11-10-2018 IPR003849 Preprotein translocase YajC AMS64_11710 39f11db3f0751820c71f919299f9b04a 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 103 1.5E-30 T 11-10-2018 IPR003849 Preprotein translocase YajC AMS64_11710 39f11db3f0751820c71f919299f9b04a 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 7.3E-15 T 11-10-2018 IPR003849 Preprotein translocase YajC AMS64_11710 39f11db3f0751820c71f919299f9b04a 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 7.3E-15 T 11-10-2018 IPR003849 Preprotein translocase YajC AMS64_11465 c3fdfce2e0f4cecfc38b2fc85e489e42 751 Gene3D G3DSA:3.40.720.10 446 687 2.8E-28 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMS64_11465 c3fdfce2e0f4cecfc38b2fc85e489e42 751 SUPERFAMILY SSF53649 465 677 1.39E-15 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMS64_11465 c3fdfce2e0f4cecfc38b2fc85e489e42 751 Pfam PF00884 Sulfatase 466 678 2.5E-19 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AMS64_06470 c758309eb28457457fdf3d5374447e5c 261 Gene3D G3DSA:3.40.190.10 122 216 1.7E-9 T 11-10-2018 AMS64_06470 c758309eb28457457fdf3d5374447e5c 261 Gene3D G3DSA:3.40.190.10 36 251 1.7E-9 T 11-10-2018 AMS64_06470 c758309eb28457457fdf3d5374447e5c 261 SUPERFAMILY SSF53850 33 257 2.17E-21 T 11-10-2018 AMS64_11680 fcc0391d1a1538e892b6f1aad145c292 331 Pfam PF01136 Peptidase family U32 76 330 6.5E-69 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AMS64_11680 fcc0391d1a1538e892b6f1aad145c292 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AMS64_17525 3b2076dd72c8d3424ccf15f907c47273 324 Pfam PF12849 PBP superfamily domain 37 294 2.3E-32 T 11-10-2018 IPR024370 PBP domain AMS64_17525 3b2076dd72c8d3424ccf15f907c47273 324 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 11 309 2.0E-85 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 AMS64_17525 3b2076dd72c8d3424ccf15f907c47273 324 SUPERFAMILY SSF53850 35 320 4.62E-73 T 11-10-2018 AMS64_17525 3b2076dd72c8d3424ccf15f907c47273 324 Gene3D G3DSA:3.40.190.10 125 267 1.7E-104 T 11-10-2018 AMS64_17525 3b2076dd72c8d3424ccf15f907c47273 324 Gene3D G3DSA:3.40.190.10 40 311 1.7E-104 T 11-10-2018 AMS64_06455 31020f63587eb5f002dc2323e7b6caea 307 Gene3D G3DSA:1.20.1560.10 5 301 2.6E-7 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_06455 31020f63587eb5f002dc2323e7b6caea 307 Pfam PF13748 ABC transporter transmembrane region 27 262 1.0E-91 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMS64_06455 31020f63587eb5f002dc2323e7b6caea 307 SUPERFAMILY SSF90123 26 298 8.11E-15 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMS64_21105 6965b9dbe077f5986f01f4c4faa90ed7 296 SUPERFAMILY SSF55073 146 292 2.98E-43 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_21105 6965b9dbe077f5986f01f4c4faa90ed7 296 Gene3D G3DSA:3.30.450.20 3 141 2.2E-7 T 11-10-2018 AMS64_21105 6965b9dbe077f5986f01f4c4faa90ed7 296 SUPERFAMILY SSF55785 6 83 6.28E-6 T 11-10-2018 IPR035965 PAS domain superfamily AMS64_21105 6965b9dbe077f5986f01f4c4faa90ed7 296 Gene3D G3DSA:3.30.70.270 142 295 5.6E-49 T 11-10-2018 AMS64_21105 6965b9dbe077f5986f01f4c4faa90ed7 296 SMART SM00267 130 293 4.5E-51 T 11-10-2018 IPR000160 GGDEF domain AMS64_21105 6965b9dbe077f5986f01f4c4faa90ed7 296 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 289 2.2E-39 T 11-10-2018 IPR000160 GGDEF domain AMS64_21105 6965b9dbe077f5986f01f4c4faa90ed7 296 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 291 3.1E-42 T 11-10-2018 IPR000160 GGDEF domain AMS64_20385 9258c78bbd675fe4261cc2ab8c62ec6e 369 SUPERFAMILY SSF52540 3 337 2.0E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_20385 9258c78bbd675fe4261cc2ab8c62ec6e 369 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 344 3.1E-124 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AMS64_20385 9258c78bbd675fe4261cc2ab8c62ec6e 369 Gene3D G3DSA:3.30.450.90 1 99 6.7E-22 T 11-10-2018 AMS64_20385 9258c78bbd675fe4261cc2ab8c62ec6e 369 Gene3D G3DSA:3.40.50.300 101 353 3.9E-84 T 11-10-2018 AMS64_20385 9258c78bbd675fe4261cc2ab8c62ec6e 369 Pfam PF00437 Type II/IV secretion system protein 114 269 1.7E-36 T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_00575 1be351979824170e1b72f337f8afee95 159 Pfam PF07603 Protein of unknown function (DUF1566) 31 156 1.2E-17 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 AMS64_10535 d4aacd0a499564160bd7965e48e978b5 97 SUPERFAMILY SSF47413 6 67 2.34E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_10535 d4aacd0a499564160bd7965e48e978b5 97 Pfam PF01381 Helix-turn-helix 12 61 2.8E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_10535 d4aacd0a499564160bd7965e48e978b5 97 SMART SM00530 11 64 2.3E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_10535 d4aacd0a499564160bd7965e48e978b5 97 Gene3D G3DSA:1.10.260.40 4 90 3.7E-12 T 11-10-2018 AMS64_16900 f8077994db875bf84f7b293227b93031 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 36.534 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMS64_16900 f8077994db875bf84f7b293227b93031 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMS64_16900 f8077994db875bf84f7b293227b93031 268 SUPERFAMILY SSF51366 1 266 2.54E-88 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMS64_16900 f8077994db875bf84f7b293227b93031 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 6.1E-97 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMS64_16900 f8077994db875bf84f7b293227b93031 268 Gene3D G3DSA:3.20.20.70 1 268 9.1E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_16900 f8077994db875bf84f7b293227b93031 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 9.5E-90 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMS64_02390 6568aa87bb309153b178e58d1be44321 537 SUPERFAMILY SSF69255 250 342 3.66E-11 T 11-10-2018 AMS64_17030 6320362f7c15f49de6580180c96144be 224 Gene3D G3DSA:3.40.50.2300 1 121 4.9E-36 T 11-10-2018 AMS64_17030 6320362f7c15f49de6580180c96144be 224 Gene3D G3DSA:1.10.10.10 123 223 1.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_17030 6320362f7c15f49de6580180c96144be 224 SUPERFAMILY SSF52172 1 176 4.84E-37 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_17030 6320362f7c15f49de6580180c96144be 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 219 1.6E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_17030 6320362f7c15f49de6580180c96144be 224 SMART SM00448 1 112 1.2E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_17030 6320362f7c15f49de6580180c96144be 224 Pfam PF00072 Response regulator receiver domain 3 112 2.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_17030 6320362f7c15f49de6580180c96144be 224 SMART SM00862 145 219 4.4E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_11700 3d58a77f59c12b70619608856c99eab2 315 SUPERFAMILY SSF82866 74 295 1.28E-40 T 11-10-2018 AMS64_11700 3d58a77f59c12b70619608856c99eab2 315 Gene3D G3DSA:1.20.1640.10 106 303 1.1E-12 T 11-10-2018 AMS64_11700 3d58a77f59c12b70619608856c99eab2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 152 166 2.5E-31 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMS64_11700 3d58a77f59c12b70619608856c99eab2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 232 247 2.5E-31 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMS64_11700 3d58a77f59c12b70619608856c99eab2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 2.5E-31 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMS64_11700 3d58a77f59c12b70619608856c99eab2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 200 218 2.5E-31 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMS64_11700 3d58a77f59c12b70619608856c99eab2 315 Pfam PF07549 SecD/SecF GG Motif 33 60 4.0E-11 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMS64_11700 3d58a77f59c12b70619608856c99eab2 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 284 5.0E-81 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMS64_11700 3d58a77f59c12b70619608856c99eab2 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 114 281 2.5E-53 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMS64_11700 3d58a77f59c12b70619608856c99eab2 315 Pfam PF02355 Protein export membrane protein 110 292 3.3E-64 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMS64_11700 3d58a77f59c12b70619608856c99eab2 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 295 28.041 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMS64_11105 228ec869de830d0b9d1e5e8a42e76919 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMS64_11105 228ec869de830d0b9d1e5e8a42e76919 214 PRINTS PR00094 Adenylate kinase signature 32 46 3.8E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMS64_11105 228ec869de830d0b9d1e5e8a42e76919 214 PRINTS PR00094 Adenylate kinase signature 81 97 3.8E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMS64_11105 228ec869de830d0b9d1e5e8a42e76919 214 PRINTS PR00094 Adenylate kinase signature 4 17 3.8E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMS64_11105 228ec869de830d0b9d1e5e8a42e76919 214 PRINTS PR00094 Adenylate kinase signature 156 171 3.8E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMS64_11105 228ec869de830d0b9d1e5e8a42e76919 214 PRINTS PR00094 Adenylate kinase signature 173 187 3.8E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMS64_11105 228ec869de830d0b9d1e5e8a42e76919 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 8.6E-16 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AMS64_11105 228ec869de830d0b9d1e5e8a42e76919 214 SUPERFAMILY SSF52540 1 211 1.41E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11105 228ec869de830d0b9d1e5e8a42e76919 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.692 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMS64_11105 228ec869de830d0b9d1e5e8a42e76919 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 7.3E-74 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AMS64_11105 228ec869de830d0b9d1e5e8a42e76919 214 Pfam PF00406 Adenylate kinase 5 185 1.6E-57 T 11-10-2018 AMS64_11105 228ec869de830d0b9d1e5e8a42e76919 214 Gene3D G3DSA:3.40.50.300 1 213 2.5E-78 T 11-10-2018 AMS64_17815 f94b71e882a2eb7dfab092d3234349e6 264 PIRSF PIRSF001332 16 264 1.2E-87 T 11-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AMS64_17815 f94b71e882a2eb7dfab092d3234349e6 264 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 33 263 2.6E-84 T 11-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AMS64_17815 f94b71e882a2eb7dfab092d3234349e6 264 SUPERFAMILY SSF117856 33 263 7.32E-81 T 11-10-2018 AMS64_17815 f94b71e882a2eb7dfab092d3234349e6 264 Gene3D G3DSA:3.30.1330.80 109 231 9.8E-77 T 11-10-2018 AMS64_17815 f94b71e882a2eb7dfab092d3234349e6 264 Pfam PF03306 Alpha-acetolactate decarboxylase 34 251 3.3E-80 T 11-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AMS64_17815 f94b71e882a2eb7dfab092d3234349e6 264 Gene3D G3DSA:3.30.1330.80 34 250 9.8E-77 T 11-10-2018 AMS64_01995 75ab8cd541d25dc4c0c87d60dec9bf2c 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01995 75ab8cd541d25dc4c0c87d60dec9bf2c 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.1E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01995 75ab8cd541d25dc4c0c87d60dec9bf2c 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.1E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01995 75ab8cd541d25dc4c0c87d60dec9bf2c 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.1E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01995 75ab8cd541d25dc4c0c87d60dec9bf2c 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.1E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01995 75ab8cd541d25dc4c0c87d60dec9bf2c 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.0E-48 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMS64_01995 75ab8cd541d25dc4c0c87d60dec9bf2c 137 SUPERFAMILY SSF54686 1 134 8.77E-55 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AMS64_01995 75ab8cd541d25dc4c0c87d60dec9bf2c 137 Gene3D G3DSA:3.90.1170.10 1 137 1.3E-56 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AMS64_01995 75ab8cd541d25dc4c0c87d60dec9bf2c 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.6E-58 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01995 75ab8cd541d25dc4c0c87d60dec9bf2c 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01995 75ab8cd541d25dc4c0c87d60dec9bf2c 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.245 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_10320 97ddd283ea9ce8cb3984338a67abd253 365 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 157 364 1.0E-91 T 11-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 AMS64_10320 97ddd283ea9ce8cb3984338a67abd253 365 Gene3D G3DSA:3.40.50.300 164 365 3.2E-64 T 11-10-2018 AMS64_10320 97ddd283ea9ce8cb3984338a67abd253 365 SUPERFAMILY SSF52540 158 364 4.79E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10320 97ddd283ea9ce8cb3984338a67abd253 365 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 184 346 5.1E-38 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMS64_12875 923b685a9c1faaf1d9eaa87dfa41d269 630 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 530 620 9.8E-18 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMS64_12875 923b685a9c1faaf1d9eaa87dfa41d269 630 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 172 501 1.3E-82 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AMS64_12875 923b685a9c1faaf1d9eaa87dfa41d269 630 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 530 612 2.3E-28 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AMS64_12875 923b685a9c1faaf1d9eaa87dfa41d269 630 Gene3D G3DSA:3.40.930.10 2 147 5.4E-41 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_12875 923b685a9c1faaf1d9eaa87dfa41d269 630 SUPERFAMILY SSF52794 528 626 1.48E-31 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AMS64_12875 923b685a9c1faaf1d9eaa87dfa41d269 630 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 131 3.5E-39 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AMS64_12875 923b685a9c1faaf1d9eaa87dfa41d269 630 Pfam PF02378 Phosphotransferase system, EIIC 191 448 1.3E-14 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMS64_12875 923b685a9c1faaf1d9eaa87dfa41d269 630 SUPERFAMILY SSF55804 4 147 9.68E-37 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_12875 923b685a9c1faaf1d9eaa87dfa41d269 630 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 1.5E-34 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMS64_12875 923b685a9c1faaf1d9eaa87dfa41d269 630 Gene3D G3DSA:3.40.50.2300 525 629 3.5E-35 T 11-10-2018 AMS64_15465 919c2eaa4d340ec7d42d7f30730ed925 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.954 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AMS64_15465 919c2eaa4d340ec7d42d7f30730ed925 212 Pfam PF00551 Formyl transferase 2 182 2.5E-64 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMS64_15465 919c2eaa4d340ec7d42d7f30730ed925 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 5.4E-76 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AMS64_15465 919c2eaa4d340ec7d42d7f30730ed925 212 SUPERFAMILY SSF53328 2 196 1.16E-67 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMS64_15465 919c2eaa4d340ec7d42d7f30730ed925 212 Gene3D G3DSA:3.40.50.170 2 212 6.8E-87 T 11-10-2018 AMS64_15465 919c2eaa4d340ec7d42d7f30730ed925 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMS64_03110 10a48f85c415674df3301fc8b4b3d809 261 Pfam PF00460 Flagella basal body rod protein 5 35 1.1E-10 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMS64_03110 10a48f85c415674df3301fc8b4b3d809 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 2.1E-113 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AMS64_03110 10a48f85c415674df3301fc8b4b3d809 261 SUPERFAMILY SSF117143 93 222 1.57E-36 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMS64_03110 10a48f85c415674df3301fc8b4b3d809 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AMS64_03110 10a48f85c415674df3301fc8b4b3d809 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 2.0E-34 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMS64_03110 10a48f85c415674df3301fc8b4b3d809 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 2.0E-44 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMS64_03110 10a48f85c415674df3301fc8b4b3d809 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 6.3E-26 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMS64_01815 339136dc2437b19f1e424c4ece1b86b2 145 Gene3D G3DSA:3.50.80.10 1 145 9.5E-54 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AMS64_01815 339136dc2437b19f1e424c4ece1b86b2 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 1.6E-51 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AMS64_01815 339136dc2437b19f1e424c4ece1b86b2 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.186 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AMS64_01815 339136dc2437b19f1e424c4ece1b86b2 145 SUPERFAMILY SSF69500 2 144 8.11E-54 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AMS64_01815 339136dc2437b19f1e424c4ece1b86b2 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 145 3.4E-63 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AMS64_14945 d894e2c44a8554bbbca4d22ccbdc98ca 228 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 183 2.9E-26 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AMS64_14945 d894e2c44a8554bbbca4d22ccbdc98ca 228 SUPERFAMILY SSF103642 207 227 7.52E-8 T 11-10-2018 AMS64_14945 d894e2c44a8554bbbca4d22ccbdc98ca 228 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 152 2.4E-31 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AMS64_14945 d894e2c44a8554bbbca4d22ccbdc98ca 228 SUPERFAMILY SSF101327 15 143 1.31E-20 T 11-10-2018 IPR036255 YgfB-like superfamily AMS64_14945 d894e2c44a8554bbbca4d22ccbdc98ca 228 Pfam PF02810 SEC-C motif 210 227 2.5E-10 T 11-10-2018 IPR004027 SEC-C motif AMS64_14945 d894e2c44a8554bbbca4d22ccbdc98ca 228 Gene3D G3DSA:3.10.450.50 178 228 1.5E-9 T 11-10-2018 AMS64_15175 441294eff7a2c15e91a89175372a0fee 468 Pfam PF00860 Permease family 28 407 2.3E-108 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AMS64_15175 441294eff7a2c15e91a89175372a0fee 468 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 357 377 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AMS64_15175 441294eff7a2c15e91a89175372a0fee 468 TIGRFAM TIGR03173 pbuX: xanthine permease 33 443 1.0E-153 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 AMS64_15175 441294eff7a2c15e91a89175372a0fee 468 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 26 440 7.0E-121 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AMS64_01005 51926092415568a26d4c14fee4e4e869 297 SUPERFAMILY SSF53850 88 293 2.17E-36 T 11-10-2018 AMS64_01005 51926092415568a26d4c14fee4e4e869 297 Gene3D G3DSA:3.40.190.10 165 266 1.0E-34 T 11-10-2018 AMS64_01005 51926092415568a26d4c14fee4e4e869 297 SUPERFAMILY SSF46785 1 111 1.14E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_01005 51926092415568a26d4c14fee4e4e869 297 Gene3D G3DSA:1.10.10.10 1 84 1.6E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_01005 51926092415568a26d4c14fee4e4e869 297 Pfam PF03466 LysR substrate binding domain 87 292 4.0E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_01005 51926092415568a26d4c14fee4e4e869 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_01005 51926092415568a26d4c14fee4e4e869 297 Gene3D G3DSA:3.40.190.10 90 288 1.0E-34 T 11-10-2018 AMS64_12895 38ebf1ce9dae0deb52c5e6f94e9addb2 641 Gene3D G3DSA:3.50.50.60 78 154 2.5E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_12895 38ebf1ce9dae0deb52c5e6f94e9addb2 641 SUPERFAMILY SSF51905 80 638 6.48E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_12895 38ebf1ce9dae0deb52c5e6f94e9addb2 641 Pfam PF13450 NAD(P)-binding Rossmann-like domain 85 141 5.0E-13 T 11-10-2018 AMS64_17010 19dc8b960c00f13dfe13f951154bc0c6 332 Gene3D G3DSA:3.40.50.720 2 258 1.6E-33 T 11-10-2018 AMS64_17010 19dc8b960c00f13dfe13f951154bc0c6 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 86 212 3.4E-11 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMS64_17010 19dc8b960c00f13dfe13f951154bc0c6 332 SUPERFAMILY SSF51735 1 260 3.41E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_10240 db95c3559b68212d46af244d3b77cd8a 622 TIGRFAM TIGR00794 kup: potassium uptake protein 101 549 5.7E-177 T 11-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AMS64_10240 db95c3559b68212d46af244d3b77cd8a 622 Pfam PF02705 K+ potassium transporter 14 544 3.0E-204 T 11-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AMS64_10240 db95c3559b68212d46af244d3b77cd8a 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.197 T 11-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup AMS64_08970 b38e241f7f7147f2d6826dd3a9004b1f 530 Gene3D G3DSA:3.40.630.10 397 486 4.0E-6 T 11-10-2018 AMS64_08970 b38e241f7f7147f2d6826dd3a9004b1f 530 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 271 526 4.6E-117 T 11-10-2018 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family AMS64_08970 b38e241f7f7147f2d6826dd3a9004b1f 530 Pfam PF13478 XdhC Rossmann domain 106 247 7.3E-33 T 11-10-2018 IPR027051 XdhC Rossmann domain AMS64_08970 b38e241f7f7147f2d6826dd3a9004b1f 530 Pfam PF02625 XdhC and CoxI family 12 73 1.4E-14 T 11-10-2018 IPR003777 XdhC- CoxI AMS64_08970 b38e241f7f7147f2d6826dd3a9004b1f 530 Gene3D G3DSA:3.40.50.720 105 253 1.0E-37 T 11-10-2018 AMS64_03725 eea7d5314895234527d51d4cee47bbf0 382 Pfam PF00994 Probable molybdopterin binding domain 4 169 2.8E-34 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_03725 eea7d5314895234527d51d4cee47bbf0 382 Gene3D G3DSA:3.40.980.10 1 171 5.7E-52 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMS64_03725 eea7d5314895234527d51d4cee47bbf0 382 SMART SM00852 4 171 1.5E-39 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_03725 eea7d5314895234527d51d4cee47bbf0 382 SUPERFAMILY SSF53218 1 198 1.96E-38 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMS64_03725 eea7d5314895234527d51d4cee47bbf0 382 PIRSF PIRSF006728 283 369 9.3 T 11-10-2018 IPR008135 Competence-induced protein CinA AMS64_03725 eea7d5314895234527d51d4cee47bbf0 382 PIRSF PIRSF006728 1 298 9.9E-85 T 11-10-2018 IPR008135 Competence-induced protein CinA AMS64_03725 eea7d5314895234527d51d4cee47bbf0 382 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 279 1.8E-76 T 11-10-2018 IPR008135 Competence-induced protein CinA AMS64_03725 eea7d5314895234527d51d4cee47bbf0 382 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 382 91.656 T 11-10-2018 IPR008135 Competence-induced protein CinA AMS64_03725 eea7d5314895234527d51d4cee47bbf0 382 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 164 1.0E-27 T 11-10-2018 IPR001453 MoaB/Mog domain AMS64_06070 e3a604674e4bc038c6131b47c2424b56 260 PIRSF PIRSF000857 7 255 9.6E-52 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AMS64_06070 e3a604674e4bc038c6131b47c2424b56 260 Gene3D G3DSA:3.40.50.620 10 223 1.9E-61 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_06070 e3a604674e4bc038c6131b47c2424b56 260 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 28 249 8.6E-84 T 11-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 AMS64_06070 e3a604674e4bc038c6131b47c2424b56 260 SUPERFAMILY SSF52402 31 215 5.02E-53 T 11-10-2018 AMS64_06070 e3a604674e4bc038c6131b47c2424b56 260 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 42 250 7.1E-81 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AMS64_06070 e3a604674e4bc038c6131b47c2424b56 260 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 55 226 1.2E-45 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AMS64_06070 e3a604674e4bc038c6131b47c2424b56 260 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 16 250 39.155 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 PIRSF PIRSF019574 1 366 3.9E-138 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 Pfam PF13416 Bacterial extracellular solute-binding protein 43 329 2.4E-29 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 Gene3D G3DSA:3.40.190.10 30 332 1.8E-137 T 11-10-2018 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 SUPERFAMILY SSF53850 26 365 1.95E-100 T 11-10-2018 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 215 234 1.9E-66 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 155 169 1.9E-66 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 310 336 1.9E-66 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 178 197 1.9E-66 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.9E-66 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 265 284 1.9E-66 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 1.9E-66 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 1.9E-66 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.9E-66 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 1.9E-66 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMS64_01695 c5339dad0db65a81fdf31368504c8224 366 Gene3D G3DSA:3.40.190.10 133 361 1.8E-137 T 11-10-2018 AMS64_17915 279449b9cb8206a15e4a18ba7ae16800 501 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 4 487 45.051 T 11-10-2018 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B AMS64_17915 279449b9cb8206a15e4a18ba7ae16800 501 Gene3D G3DSA:1.20.1250.20 7 484 3.3E-107 T 11-10-2018 AMS64_17915 279449b9cb8206a15e4a18ba7ae16800 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 10 484 6.5E-212 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AMS64_17915 279449b9cb8206a15e4a18ba7ae16800 501 Pfam PF00854 POT family 83 443 5.5E-86 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AMS64_17915 279449b9cb8206a15e4a18ba7ae16800 501 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 146 158 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AMS64_17915 279449b9cb8206a15e4a18ba7ae16800 501 SUPERFAMILY SSF103473 10 481 2.35E-25 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_09905 eb8348dfd93c597198fa4a5d4d543bac 276 Gene3D G3DSA:3.40.190.10 31 245 3.9E-24 T 11-10-2018 AMS64_09905 eb8348dfd93c597198fa4a5d4d543bac 276 SUPERFAMILY SSF53850 21 247 4.0E-30 T 11-10-2018 AMS64_09905 eb8348dfd93c597198fa4a5d4d543bac 276 Gene3D G3DSA:3.40.190.10 113 222 3.9E-24 T 11-10-2018 AMS64_09905 eb8348dfd93c597198fa4a5d4d543bac 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 244 7.6E-18 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_22350 1758bccd3fcc211f7b2780438d4fbeea 314 Gene3D G3DSA:3.10.25.10 209 313 1.1E-35 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMS64_22350 1758bccd3fcc211f7b2780438d4fbeea 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 306 37.036 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AMS64_22350 1758bccd3fcc211f7b2780438d4fbeea 314 SUPERFAMILY SSF50486 207 309 2.51E-34 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AMS64_22350 1758bccd3fcc211f7b2780438d4fbeea 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 6.9E-105 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AMS64_22350 1758bccd3fcc211f7b2780438d4fbeea 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMS64_22350 1758bccd3fcc211f7b2780438d4fbeea 314 Gene3D G3DSA:3.40.50.170 1 208 7.0E-85 T 11-10-2018 AMS64_22350 1758bccd3fcc211f7b2780438d4fbeea 314 Pfam PF00551 Formyl transferase 7 183 7.7E-52 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMS64_22350 1758bccd3fcc211f7b2780438d4fbeea 314 Pfam PF02911 Formyl transferase, C-terminal domain 206 303 7.8E-30 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMS64_22350 1758bccd3fcc211f7b2780438d4fbeea 314 SUPERFAMILY SSF53328 3 206 4.84E-67 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMS64_13415 eb81d4d426e90b41202f68f113f519cd 96 Pfam PF06291 Bor protein 21 94 3.4E-32 T 11-10-2018 IPR010438 Bor GO:0009279 AMS64_13415 eb81d4d426e90b41202f68f113f519cd 96 ProDom PD020173 BOR LIPOPROTEIN PLASMID ISS HOMOLOG MEMBRANE FROM PRECURSOR PALMITATE DLP12 1 95 2.0E-31 T 11-10-2018 IPR010438 Bor GO:0009279 AMS64_18235 8004d3a3ef9127924034a13a25e39542 104 PIRSF PIRSF003113 1 99 1.8E-36 T 11-10-2018 IPR002634 BolA protein AMS64_18235 8004d3a3ef9127924034a13a25e39542 104 SUPERFAMILY SSF82657 1 89 2.49E-31 T 11-10-2018 IPR036065 BolA-like superfamily AMS64_18235 8004d3a3ef9127924034a13a25e39542 104 Gene3D G3DSA:3.30.300.90 1 89 2.1E-35 T 11-10-2018 AMS64_18235 8004d3a3ef9127924034a13a25e39542 104 Pfam PF01722 BolA-like protein 11 84 3.2E-31 T 11-10-2018 IPR002634 BolA protein AMS64_02285 2b5ed4e3cfe7f64b884f8c68c959a710 303 Pfam PF00561 alpha/beta hydrolase fold 27 191 1.1E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_02285 2b5ed4e3cfe7f64b884f8c68c959a710 303 SUPERFAMILY SSF53474 22 300 1.9E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_02285 2b5ed4e3cfe7f64b884f8c68c959a710 303 Gene3D G3DSA:3.40.50.1820 20 303 1.2E-89 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_14420 30278df44e8dacb047092ad3f4546dfe 196 Gene3D G3DSA:1.20.1440.20 24 195 3.0E-65 T 11-10-2018 IPR023353 LemA-like domain superfamily AMS64_14420 30278df44e8dacb047092ad3f4546dfe 196 SUPERFAMILY SSF140478 31 181 8.5E-54 T 11-10-2018 IPR023353 LemA-like domain superfamily AMS64_14420 30278df44e8dacb047092ad3f4546dfe 196 Pfam PF04011 LemA family 16 195 3.3E-66 T 11-10-2018 IPR007156 LemA AMS64_02230 0de4210027fddbd5358abb1d102442c5 217 SUPERFAMILY SSF56784 2 208 2.84E-27 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_02230 0de4210027fddbd5358abb1d102442c5 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 200 1.2E-49 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AMS64_02230 0de4210027fddbd5358abb1d102442c5 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 187 8.8E-37 T 11-10-2018 AMS64_02230 0de4210027fddbd5358abb1d102442c5 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 2.4E-24 T 11-10-2018 AMS64_02230 0de4210027fddbd5358abb1d102442c5 217 Gene3D G3DSA:3.40.50.1000 3 212 1.1E-69 T 11-10-2018 IPR023214 HAD superfamily AMS64_02230 0de4210027fddbd5358abb1d102442c5 217 Gene3D G3DSA:1.20.1440.100 15 87 1.1E-69 T 11-10-2018 AMS64_19630 8581dbdffb242433d54d4eaf420e1938 465 SUPERFAMILY SSF56954 3 449 1.44E-68 T 11-10-2018 AMS64_19630 8581dbdffb242433d54d4eaf420e1938 465 Pfam PF02321 Outer membrane efflux protein 263 447 3.5E-23 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMS64_19630 8581dbdffb242433d54d4eaf420e1938 465 Pfam PF02321 Outer membrane efflux protein 30 242 5.6E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMS64_19630 8581dbdffb242433d54d4eaf420e1938 465 Gene3D G3DSA:1.20.1600.10 21 458 2.4E-64 T 11-10-2018 AMS64_09855 595e4c57c02606430f33dc9c0cc0bb52 1028 Pfam PF10150 Ribonuclease E/G family 121 390 1.6E-94 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AMS64_09855 595e4c57c02606430f33dc9c0cc0bb52 1028 SUPERFAMILY SSF50249 40 124 9.75E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_09855 595e4c57c02606430f33dc9c0cc0bb52 1028 SMART SM00316 37 119 1.6E-11 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_09855 595e4c57c02606430f33dc9c0cc0bb52 1028 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 2.3E-169 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AMS64_09855 595e4c57c02606430f33dc9c0cc0bb52 1028 Pfam PF00575 S1 RNA binding domain 36 118 8.8E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMS64_09855 595e4c57c02606430f33dc9c0cc0bb52 1028 Gene3D G3DSA:3.40.1260.20 400 507 3.0E-41 T 11-10-2018 AMS64_09855 595e4c57c02606430f33dc9c0cc0bb52 1028 Gene3D G3DSA:2.40.50.140 32 125 4.2E-32 T 11-10-2018 AMS64_09855 595e4c57c02606430f33dc9c0cc0bb52 1028 Hamap MF_00970 Ribonuclease E [rne]. 1 992 35.589 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AMS64_16090 dc2a26f11e699679845723ef1e74447c 174 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 1.7E-69 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AMS64_16090 dc2a26f11e699679845723ef1e74447c 174 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AMS64_16090 dc2a26f11e699679845723ef1e74447c 174 SUPERFAMILY SSF52218 4 169 2.31E-52 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_16090 dc2a26f11e699679845723ef1e74447c 174 PIRSF PIRSF038996 1 172 2.0E-65 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AMS64_16090 dc2a26f11e699679845723ef1e74447c 174 Pfam PF00258 Flavodoxin 6 160 1.0E-28 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMS64_16090 dc2a26f11e699679845723ef1e74447c 174 Gene3D G3DSA:3.40.50.360 3 173 5.4E-54 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_07015 5cfe232b0c30c01f412be495adcf8ba3 339 Gene3D G3DSA:3.40.50.300 4 332 1.5E-92 T 11-10-2018 AMS64_07015 5cfe232b0c30c01f412be495adcf8ba3 339 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 319 4.0E-21 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_07015 5cfe232b0c30c01f412be495adcf8ba3 339 Pfam PF00005 ABC transporter 27 183 1.1E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_07015 5cfe232b0c30c01f412be495adcf8ba3 339 SMART SM00382 35 233 9.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_07015 5cfe232b0c30c01f412be495adcf8ba3 339 SUPERFAMILY SSF52540 6 254 2.3E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07015 5cfe232b0c30c01f412be495adcf8ba3 339 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_07015 5cfe232b0c30c01f412be495adcf8ba3 339 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 4.8E-16 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMS64_11190 48990a5d127c66164308be2fa684264d 105 SUPERFAMILY SSF54736 20 104 2.2E-34 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMS64_11190 48990a5d127c66164308be2fa684264d 105 Gene3D G3DSA:3.30.1390.10 1 105 7.0E-45 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMS64_11190 48990a5d127c66164308be2fa684264d 105 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 9 100 29.166 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AMS64_11190 48990a5d127c66164308be2fa684264d 105 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 101 2.8E-34 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AMS64_03300 fb67b9ed750542e4e339140872f5c653 240 Gene3D G3DSA:1.10.3900.10 9 175 1.4E-83 T 11-10-2018 AMS64_03300 fb67b9ed750542e4e339140872f5c653 240 Gene3D G3DSA:2.60.440.10 2 240 1.4E-83 T 11-10-2018 IPR027462 Z ring-associated protein D, C-terminal AMS64_03300 fb67b9ed750542e4e339140872f5c653 240 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 240 29.923 T 11-10-2018 IPR009777 Cell division protein ZapD AMS64_03300 fb67b9ed750542e4e339140872f5c653 240 SUPERFAMILY SSF160950 2 240 1.7E-82 T 11-10-2018 IPR036268 ZapD domain superfamily AMS64_03300 fb67b9ed750542e4e339140872f5c653 240 Pfam PF07072 Cell division protein 15 221 4.2E-74 T 11-10-2018 IPR009777 Cell division protein ZapD AMS64_19875 d001de7579d89292cf53571835ed1939 381 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 371 4.9E-128 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 AMS64_19875 d001de7579d89292cf53571835ed1939 381 Pfam PF06969 HemN C-terminal domain 306 367 1.9E-9 T 11-10-2018 IPR010723 HemN, C-terminal AMS64_19875 d001de7579d89292cf53571835ed1939 381 SUPERFAMILY SSF102114 5 379 3.66E-108 T 11-10-2018 AMS64_19875 d001de7579d89292cf53571835ed1939 381 SMART SM00729 6 223 6.4E-53 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMS64_19875 d001de7579d89292cf53571835ed1939 381 Gene3D G3DSA:3.80.30.20 2 296 1.8E-98 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMS64_19875 d001de7579d89292cf53571835ed1939 381 Pfam PF04055 Radical SAM superfamily 11 175 2.7E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_21910 e8b5ce3f0a8aa516d08474cce9be80f8 466 SMART SM00388 246 314 4.8E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_21910 e8b5ce3f0a8aa516d08474cce9be80f8 466 SUPERFAMILY SSF47384 231 313 3.14E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_21910 e8b5ce3f0a8aa516d08474cce9be80f8 466 Gene3D G3DSA:3.30.565.10 312 466 4.8E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_21910 e8b5ce3f0a8aa516d08474cce9be80f8 466 SUPERFAMILY SSF55874 317 465 3.14E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_21910 e8b5ce3f0a8aa516d08474cce9be80f8 466 Gene3D G3DSA:1.10.287.130 236 311 4.2E-15 T 11-10-2018 AMS64_21910 e8b5ce3f0a8aa516d08474cce9be80f8 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 312 1.2E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMS64_21910 e8b5ce3f0a8aa516d08474cce9be80f8 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 8.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_21910 e8b5ce3f0a8aa516d08474cce9be80f8 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 8.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_21910 e8b5ce3f0a8aa516d08474cce9be80f8 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 202 216 8.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMS64_21910 e8b5ce3f0a8aa516d08474cce9be80f8 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 465 3.5E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_21910 e8b5ce3f0a8aa516d08474cce9be80f8 466 SMART SM00387 357 466 1.2E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_03325 4b0c84bd926e191570ef0697ab3c78de 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_03325 4b0c84bd926e191570ef0697ab3c78de 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 2.0E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_03325 4b0c84bd926e191570ef0697ab3c78de 145 Gene3D G3DSA:3.30.700.10 11 143 1.0E-28 T 11-10-2018 AMS64_03325 4b0c84bd926e191570ef0697ab3c78de 145 Pfam PF00114 Pilin (bacterial filament) 40 137 8.1E-6 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 AMS64_03325 4b0c84bd926e191570ef0697ab3c78de 145 SUPERFAMILY SSF54523 11 127 3.03E-23 T 11-10-2018 AMS64_03325 4b0c84bd926e191570ef0697ab3c78de 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 31 5.9E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_00710 e7e77366eecf04015e759a8c90482824 261 Gene3D G3DSA:3.20.20.140 1 261 6.6E-92 T 11-10-2018 AMS64_00710 e7e77366eecf04015e759a8c90482824 261 PIRSF PIRSF005902 1 260 7.5E-71 T 11-10-2018 IPR001130 TatD family GO:0016788 AMS64_00710 e7e77366eecf04015e759a8c90482824 261 SUPERFAMILY SSF51556 1 257 1.19E-80 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_00710 e7e77366eecf04015e759a8c90482824 261 Pfam PF01026 TatD related DNase 2 256 1.1E-64 T 11-10-2018 IPR001130 TatD family GO:0016788 AMS64_14635 55be0733e34883bf393551766a2d3b0a 354 Pfam PF00962 Adenosine/AMP deaminase 23 338 1.1E-69 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AMS64_14635 55be0733e34883bf393551766a2d3b0a 354 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 23 340 4.4E-109 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AMS64_14635 55be0733e34883bf393551766a2d3b0a 354 Gene3D G3DSA:3.20.20.140 12 351 5.6E-103 T 11-10-2018 AMS64_14635 55be0733e34883bf393551766a2d3b0a 354 SUPERFAMILY SSF51556 17 344 2.69E-87 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_14635 55be0733e34883bf393551766a2d3b0a 354 Hamap MF_01962 Adenine deaminase. 19 331 81.601 T 11-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AMS64_11545 274c94fe2677774e2a39f324d9b40766 247 SMART SM00014 92 240 1.4E-24 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMS64_11545 274c94fe2677774e2a39f324d9b40766 247 Pfam PF01569 PAP2 superfamily 94 244 2.4E-23 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMS64_11545 274c94fe2677774e2a39f324d9b40766 247 SUPERFAMILY SSF48317 24 245 4.97E-26 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMS64_11545 274c94fe2677774e2a39f324d9b40766 247 Gene3D G3DSA:1.20.144.10 12 247 3.6E-48 T 11-10-2018 AMS64_21280 8d0753e3d8ec97160565984acb9a5ca8 273 Pfam PF08668 HDOD domain 14 205 5.9E-48 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AMS64_21280 8d0753e3d8ec97160565984acb9a5ca8 273 SUPERFAMILY SSF109604 5 264 1.35E-59 T 11-10-2018 AMS64_21280 8d0753e3d8ec97160565984acb9a5ca8 273 Gene3D G3DSA:1.10.3210.10 2 269 1.4E-62 T 11-10-2018 AMS64_07945 f79cb5a69d345600ecc3572c70ff5a7f 261 Gene3D G3DSA:3.40.50.300 4 261 3.9E-69 T 11-10-2018 AMS64_07945 f79cb5a69d345600ecc3572c70ff5a7f 261 Pfam PF00005 ABC transporter 32 179 6.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_07945 f79cb5a69d345600ecc3572c70ff5a7f 261 SMART SM00382 40 229 1.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_07945 f79cb5a69d345600ecc3572c70ff5a7f 261 SUPERFAMILY SSF52540 6 251 2.88E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07945 f79cb5a69d345600ecc3572c70ff5a7f 261 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_20255 7be7d6e649b80e0a4137562cb0036a13 107 Gene3D G3DSA:2.60.40.10 6 107 9.7E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMS64_20255 7be7d6e649b80e0a4137562cb0036a13 107 SUPERFAMILY SSF81296 23 105 1.07E-10 T 11-10-2018 IPR014756 Immunoglobulin E-set AMS64_20390 60fe3f7938670c99ad6e11c8617d02e8 344 Pfam PF00437 Type II/IV secretion system protein 12 265 7.4E-47 T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_20390 60fe3f7938670c99ad6e11c8617d02e8 344 Gene3D G3DSA:3.40.50.300 101 344 2.8E-105 T 11-10-2018 AMS64_20390 60fe3f7938670c99ad6e11c8617d02e8 344 Gene3D G3DSA:3.30.450.90 1 100 3.9E-37 T 11-10-2018 AMS64_20390 60fe3f7938670c99ad6e11c8617d02e8 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 1.2E-153 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AMS64_20390 60fe3f7938670c99ad6e11c8617d02e8 344 SMART SM00382 122 247 7.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_20390 60fe3f7938670c99ad6e11c8617d02e8 344 SUPERFAMILY SSF52540 5 330 1.2E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_20390 60fe3f7938670c99ad6e11c8617d02e8 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AMS64_12130 9cb4f5c3f87450db180c8172d5fed3df 63 SUPERFAMILY SSF46575 1 61 3.27E-6 T 11-10-2018 AMS64_12130 9cb4f5c3f87450db180c8172d5fed3df 63 Pfam PF11686 Protein of unknown function (DUF3283) 4 60 9.7E-8 T 11-10-2018 IPR021700 Protein of unknown function DUF3283 AMS64_17100 acb3abd878291b870ff5ab4d8b242cd8 156 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 21 58 3.2E-8 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AMS64_17100 acb3abd878291b870ff5ab4d8b242cd8 156 SUPERFAMILY SSF54534 23 155 5.5E-48 T 11-10-2018 AMS64_17100 acb3abd878291b870ff5ab4d8b242cd8 156 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 65 153 4.1E-26 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMS64_17100 acb3abd878291b870ff5ab4d8b242cd8 156 Gene3D G3DSA:3.10.50.40 18 156 5.3E-52 T 11-10-2018 AMS64_13125 93b14ada026522cd44331bb83baea2cf 69 Pfam PF06568 Domain of unknown function (DUF1127) 29 58 1.2E-9 T 11-10-2018 IPR009506 Protein of unknown function DUF1127 AMS64_17240 82d90c63254c293ab05b7119d1345b95 190 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 8 179 4.3E-59 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AMS64_17240 82d90c63254c293ab05b7119d1345b95 190 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 4.3E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_17240 82d90c63254c293ab05b7119d1345b95 190 SUPERFAMILY SSF54523 13 113 1.02E-11 T 11-10-2018 AMS64_17240 82d90c63254c293ab05b7119d1345b95 190 PRINTS PR00885 Bacterial general secretion pathway protein H signature 23 37 1.1E-16 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AMS64_17240 82d90c63254c293ab05b7119d1345b95 190 PRINTS PR00885 Bacterial general secretion pathway protein H signature 8 22 1.1E-16 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AMS64_17240 82d90c63254c293ab05b7119d1345b95 190 PRINTS PR00885 Bacterial general secretion pathway protein H signature 139 154 1.1E-16 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AMS64_17240 82d90c63254c293ab05b7119d1345b95 190 Pfam PF12019 Type II transport protein GspH 48 168 2.8E-11 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AMS64_17240 82d90c63254c293ab05b7119d1345b95 190 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 32 3.8E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_17240 82d90c63254c293ab05b7119d1345b95 190 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_17240 82d90c63254c293ab05b7119d1345b95 190 Gene3D G3DSA:3.55.40.10 42 190 2.1E-39 T 11-10-2018 AMS64_18215 acc45e49da2db844ebb19ea9333941df 459 Gene3D G3DSA:1.20.1250.20 244 453 7.8E-9 T 11-10-2018 AMS64_18215 acc45e49da2db844ebb19ea9333941df 459 Pfam PF07690 Major Facilitator Superfamily 38 258 3.3E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_18215 acc45e49da2db844ebb19ea9333941df 459 Gene3D G3DSA:1.20.1250.20 19 243 7.8E-12 T 11-10-2018 AMS64_18215 acc45e49da2db844ebb19ea9333941df 459 SUPERFAMILY SSF103473 19 449 2.75E-38 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_00060 dbe8a248fad0ad5af6daa9b87c1113c3 316 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 4 312 7.7E-105 T 11-10-2018 IPR016833 Putative sodium bile acid cotransporter AMS64_00060 dbe8a248fad0ad5af6daa9b87c1113c3 316 PIRSF PIRSF026166 1 316 8.8E-129 T 11-10-2018 IPR016833 Putative sodium bile acid cotransporter AMS64_00060 dbe8a248fad0ad5af6daa9b87c1113c3 316 Gene3D G3DSA:1.20.1530.20 3 315 1.9E-33 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMS64_16580 6cedf9162b98e53f2efe3fba8fa4048a 661 Pfam PF02719 Polysaccharide biosynthesis protein 291 584 1.7E-129 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AMS64_16580 6cedf9162b98e53f2efe3fba8fa4048a 661 Pfam PF13727 CoA-binding domain 77 246 5.9E-13 T 11-10-2018 AMS64_16580 6cedf9162b98e53f2efe3fba8fa4048a 661 Gene3D G3DSA:3.40.50.720 150 272 2.1E-31 T 11-10-2018 AMS64_16580 6cedf9162b98e53f2efe3fba8fa4048a 661 Gene3D G3DSA:3.40.50.720 286 604 9.0E-115 T 11-10-2018 AMS64_16580 6cedf9162b98e53f2efe3fba8fa4048a 661 SUPERFAMILY SSF51735 288 562 1.03E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_16580 6cedf9162b98e53f2efe3fba8fa4048a 661 SUPERFAMILY SSF53335 124 335 1.05E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_10575 1307366fb50716dd9826da761e2ec88c 349 Pfam PF00753 Metallo-beta-lactamase superfamily 13 78 1.5E-8 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_10575 1307366fb50716dd9826da761e2ec88c 349 SUPERFAMILY SSF56281 2 313 2.29E-24 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_10220 09f39e1a1916d6dea964a6b98074962c 558 SUPERFAMILY SSF53706 1 420 6.81E-140 T 11-10-2018 AMS64_10220 09f39e1a1916d6dea964a6b98074962c 558 Gene3D G3DSA:3.40.50.740 186 374 3.4E-138 T 11-10-2018 AMS64_10220 09f39e1a1916d6dea964a6b98074962c 558 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 1 528 2.4E-205 T 11-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 AMS64_10220 09f39e1a1916d6dea964a6b98074962c 558 Pfam PF00384 Molybdopterin oxidoreductase 1 329 2.0E-71 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10220 09f39e1a1916d6dea964a6b98074962c 558 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 277 294 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AMS64_10220 09f39e1a1916d6dea964a6b98074962c 558 SUPERFAMILY SSF50692 408 545 4.07E-44 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMS64_10220 09f39e1a1916d6dea964a6b98074962c 558 Pfam PF01568 Molydopterin dinucleotide binding domain 418 525 2.0E-28 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMS64_10220 09f39e1a1916d6dea964a6b98074962c 558 Gene3D G3DSA:2.40.40.20 415 531 8.5E-44 T 11-10-2018 AMS64_10220 09f39e1a1916d6dea964a6b98074962c 558 Gene3D G3DSA:3.40.228.10 1 185 3.4E-138 T 11-10-2018 AMS64_04025 97ff1483643d5c9a19a5e77aad92f343 475 SUPERFAMILY SSF52540 1 394 1.52E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_04025 97ff1483643d5c9a19a5e77aad92f343 475 SMART SM00382 28 391 1.6E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_04025 97ff1483643d5c9a19a5e77aad92f343 475 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 31 378 1.6E-23 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMS64_18660 c14fa4f7a1affd81939e3bf977a7d725 139 Pfam PF12019 Type II transport protein GspH 42 131 2.2E-9 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AMS64_18660 c14fa4f7a1affd81939e3bf977a7d725 139 Gene3D G3DSA:3.30.700.10 6 127 2.2E-10 T 11-10-2018 AMS64_18660 c14fa4f7a1affd81939e3bf977a7d725 139 SUPERFAMILY SSF54523 6 106 3.53E-14 T 11-10-2018 AMS64_18660 c14fa4f7a1affd81939e3bf977a7d725 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_18660 c14fa4f7a1affd81939e3bf977a7d725 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 1.4E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_18660 c14fa4f7a1affd81939e3bf977a7d725 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 3.9E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_07915 9a53a47f95b94850496f5248067193ac 97 Gene3D G3DSA:1.10.10.60 8 87 4.2E-13 T 11-10-2018 AMS64_07915 9a53a47f95b94850496f5248067193ac 97 Pfam PF01527 Transposase 1 77 1.4E-17 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMS64_07915 9a53a47f95b94850496f5248067193ac 97 SUPERFAMILY SSF46689 4 89 5.2E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_09180 e9b9198a0ad9367f42e6f3d7b0c792ed 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMS64_09180 e9b9198a0ad9367f42e6f3d7b0c792ed 90 Gene3D G3DSA:3.30.70.100 3 89 6.5E-26 T 11-10-2018 AMS64_09180 e9b9198a0ad9367f42e6f3d7b0c792ed 90 Pfam PF00708 Acylphosphatase 7 87 2.8E-24 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMS64_09180 e9b9198a0ad9367f42e6f3d7b0c792ed 90 SUPERFAMILY SSF54975 4 87 2.83E-25 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMS64_14370 7b625efdbd832e7a8295e01908de0d2c 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 8.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_14370 7b625efdbd832e7a8295e01908de0d2c 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 8.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_14370 7b625efdbd832e7a8295e01908de0d2c 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 8.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_14370 7b625efdbd832e7a8295e01908de0d2c 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 17 8.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_14370 7b625efdbd832e7a8295e01908de0d2c 233 Gene3D G3DSA:3.40.50.720 3 233 6.6E-21 T 11-10-2018 AMS64_14370 7b625efdbd832e7a8295e01908de0d2c 233 SUPERFAMILY SSF51735 7 230 8.0E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_12395 2b673938337bc52435e765c694ed7904 160 SUPERFAMILY SSF49772 27 157 3.01E-49 T 11-10-2018 IPR036198 Ecotin superfamily AMS64_12395 2b673938337bc52435e765c694ed7904 160 Gene3D G3DSA:2.60.40.550 22 103 1.6E-26 T 11-10-2018 AMS64_12395 2b673938337bc52435e765c694ed7904 160 PIRSF PIRSF006865 12 160 5.6E-48 T 11-10-2018 IPR005658 Proteinase inhibitor I11, ecotin AMS64_12395 2b673938337bc52435e765c694ed7904 160 Gene3D G3DSA:4.10.1230.10 104 160 1.9E-22 T 11-10-2018 IPR027438 Ecotin, C-terminal AMS64_12395 2b673938337bc52435e765c694ed7904 160 Pfam PF03974 Ecotin 29 150 1.2E-46 T 11-10-2018 IPR005658 Proteinase inhibitor I11, ecotin AMS64_07640 a5c82416c1662bdd741006de37a7b104 345 Gene3D G3DSA:3.40.50.2300 71 337 1.0E-69 T 11-10-2018 AMS64_07640 a5c82416c1662bdd741006de37a7b104 345 SMART SM00354 10 80 2.7E-34 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_07640 a5c82416c1662bdd741006de37a7b104 345 SUPERFAMILY SSF53822 70 344 5.03E-64 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_07640 a5c82416c1662bdd741006de37a7b104 345 Gene3D G3DSA:3.40.50.2300 170 342 1.0E-69 T 11-10-2018 AMS64_07640 a5c82416c1662bdd741006de37a7b104 345 Gene3D G3DSA:1.10.260.40 4 67 2.8E-24 T 11-10-2018 AMS64_07640 a5c82416c1662bdd741006de37a7b104 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 3.6E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_07640 a5c82416c1662bdd741006de37a7b104 345 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 71 341 7.1E-47 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AMS64_07640 a5c82416c1662bdd741006de37a7b104 345 SUPERFAMILY SSF47413 10 68 4.22E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_07640 a5c82416c1662bdd741006de37a7b104 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 11-10-2018 AMS64_08530 01ed110a0df9d5a6319d186355e715ec 331 PIRSF PIRSF026649 10 314 2.4E-110 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMS64_08530 01ed110a0df9d5a6319d186355e715ec 331 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 310 46.111 T 11-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 AMS64_08530 01ed110a0df9d5a6319d186355e715ec 331 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 304 1.8E-68 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMS64_18930 5f43a4ed3f78e46f57b237b4af83e8d0 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.795 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMS64_18930 5f43a4ed3f78e46f57b237b4af83e8d0 417 Gene3D G3DSA:3.90.1150.10 10 395 1.9E-187 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_18930 5f43a4ed3f78e46f57b237b4af83e8d0 417 PIRSF PIRSF000412 1 417 2.5E-172 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMS64_18930 5f43a4ed3f78e46f57b237b4af83e8d0 417 Pfam PF00464 Serine hydroxymethyltransferase 9 386 1.2E-184 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMS64_18930 5f43a4ed3f78e46f57b237b4af83e8d0 417 Gene3D G3DSA:3.40.640.10 37 289 1.9E-187 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_18930 5f43a4ed3f78e46f57b237b4af83e8d0 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMS64_18930 5f43a4ed3f78e46f57b237b4af83e8d0 417 SUPERFAMILY SSF53383 6 416 4.95E-185 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_16830 74c184164918118965c9bf772f10b53f 235 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 3 227 1.6E-53 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AMS64_16830 74c184164918118965c9bf772f10b53f 235 Pfam PF00588 SpoU rRNA Methylase family 3 152 2.1E-29 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMS64_16830 74c184164918118965c9bf772f10b53f 235 Gene3D G3DSA:3.40.1280.10 1 160 2.2E-50 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMS64_16830 74c184164918118965c9bf772f10b53f 235 SUPERFAMILY SSF75217 2 155 2.03E-27 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMS64_16830 74c184164918118965c9bf772f10b53f 235 PIRSF PIRSF004808 1 234 3.6E-53 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AMS64_02785 088a70198385091e852772c5137cc6d5 165 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 153 8.1E-54 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AMS64_02785 088a70198385091e852772c5137cc6d5 165 Pfam PF02470 MlaD protein 39 117 1.7E-19 T 11-10-2018 IPR003399 Mce/MlaD AMS64_04410 9d1ec2bcb83d090b3c022f8c6dee50c9 196 Gene3D G3DSA:1.10.150.240 19 89 1.7E-49 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMS64_04410 9d1ec2bcb83d090b3c022f8c6dee50c9 196 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 7 186 1.1E-48 T 11-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase AMS64_04410 9d1ec2bcb83d090b3c022f8c6dee50c9 196 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 175 188 3.2E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_04410 9d1ec2bcb83d090b3c022f8c6dee50c9 196 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 3.2E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_04410 9d1ec2bcb83d090b3c022f8c6dee50c9 196 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 3.2E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_04410 9d1ec2bcb83d090b3c022f8c6dee50c9 196 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 3.2E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_04410 9d1ec2bcb83d090b3c022f8c6dee50c9 196 Gene3D G3DSA:3.40.50.1000 7 189 1.7E-49 T 11-10-2018 IPR023214 HAD superfamily AMS64_04410 9d1ec2bcb83d090b3c022f8c6dee50c9 196 SUPERFAMILY SSF56784 6 189 2.67E-49 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_04410 9d1ec2bcb83d090b3c022f8c6dee50c9 196 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 186 4.6E-31 T 11-10-2018 AMS64_04410 9d1ec2bcb83d090b3c022f8c6dee50c9 196 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 124 186 4.8E-16 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_00510 cbf8bb1bb8250da522fbee20c43e8d26 267 SUPERFAMILY SSF52540 2 256 7.81E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00510 cbf8bb1bb8250da522fbee20c43e8d26 267 PIRSF PIRSF009320 2 99 9.9E-15 T 11-10-2018 AMS64_00510 cbf8bb1bb8250da522fbee20c43e8d26 267 PIRSF PIRSF009320 93 262 2.0E-8 T 11-10-2018 AMS64_00510 cbf8bb1bb8250da522fbee20c43e8d26 267 Gene3D G3DSA:3.40.50.300 1 266 9.0E-79 T 11-10-2018 AMS64_00510 cbf8bb1bb8250da522fbee20c43e8d26 267 Pfam PF13614 AAA domain 2 178 3.7E-64 T 11-10-2018 IPR025669 AAA domain AMS64_02020 7be89304107cc518961f30dfb438cdee 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.597 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_02020 7be89304107cc518961f30dfb438cdee 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02020 7be89304107cc518961f30dfb438cdee 179 Pfam PF00281 Ribosomal protein L5 25 80 2.0E-28 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02020 7be89304107cc518961f30dfb438cdee 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.1E-40 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02020 7be89304107cc518961f30dfb438cdee 179 Gene3D G3DSA:3.30.1440.10 1 179 8.5E-80 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02020 7be89304107cc518961f30dfb438cdee 179 PIRSF PIRSF002161 1 179 9.6E-66 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_02020 7be89304107cc518961f30dfb438cdee 179 SUPERFAMILY SSF55282 4 179 3.3E-78 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_13900 ea790106da7d126156def2e2654f17b2 189 Pfam PF00665 Integrase core domain 22 136 1.0E-26 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_13900 ea790106da7d126156def2e2654f17b2 189 Gene3D G3DSA:3.30.420.10 20 169 9.8E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_13900 ea790106da7d126156def2e2654f17b2 189 SUPERFAMILY SSF53098 16 181 4.43E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_03770 736f5b429f69f06531b5c9d069879911 479 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 24 164 1.6E-32 T 11-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain AMS64_03770 736f5b429f69f06531b5c9d069879911 479 SUPERFAMILY SSF56059 264 465 3.72E-27 T 11-10-2018 AMS64_03770 736f5b429f69f06531b5c9d069879911 479 Gene3D G3DSA:3.30.470.20 358 471 1.3E-10 T 11-10-2018 AMS64_03770 736f5b429f69f06531b5c9d069879911 479 Gene3D G3DSA:3.30.1490.20 274 357 3.1E-6 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMS64_18875 000c8eebbc775e567549df09e54863e8 518 SUPERFAMILY SSF53850 26 514 3.41E-122 T 11-10-2018 AMS64_18875 000c8eebbc775e567549df09e54863e8 518 Gene3D G3DSA:3.40.190.10 190 497 2.7E-120 T 11-10-2018 AMS64_18875 000c8eebbc775e567549df09e54863e8 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site AMS64_18875 000c8eebbc775e567549df09e54863e8 518 Gene3D G3DSA:3.90.76.10 33 189 2.7E-120 T 11-10-2018 AMS64_18875 000c8eebbc775e567549df09e54863e8 518 Gene3D G3DSA:3.10.105.10 266 490 2.7E-120 T 11-10-2018 AMS64_18875 000c8eebbc775e567549df09e54863e8 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 429 8.0E-83 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AMS64_18875 000c8eebbc775e567549df09e54863e8 518 PIRSF PIRSF002741 23 510 3.0E-91 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMS64_03835 fc35e0fd867fc65a1de3cf5155c95ea6 239 Gene3D G3DSA:3.40.50.720 3 239 1.6E-38 T 11-10-2018 AMS64_03835 fc35e0fd867fc65a1de3cf5155c95ea6 239 Pfam PF00106 short chain dehydrogenase 5 192 9.0E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03835 fc35e0fd867fc65a1de3cf5155c95ea6 239 SUPERFAMILY SSF51735 5 239 1.41E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_03835 fc35e0fd867fc65a1de3cf5155c95ea6 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03835 fc35e0fd867fc65a1de3cf5155c95ea6 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03835 fc35e0fd867fc65a1de3cf5155c95ea6 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 4.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_03835 fc35e0fd867fc65a1de3cf5155c95ea6 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMS64_09050 78727df528d6fc89fb319a296bf23a5b 508 Pfam PF03606 C4-dicarboxylate anaerobic carrier 13 505 5.5E-153 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AMS64_05625 d2215ac1ee27708327d8f4d2543db5b1 424 SUPERFAMILY SSF53474 42 418 5.16E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_05625 d2215ac1ee27708327d8f4d2543db5b1 424 Pfam PF00561 alpha/beta hydrolase fold 51 271 1.6E-29 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_05625 d2215ac1ee27708327d8f4d2543db5b1 424 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 53 61 6.7E-9 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMS64_05625 d2215ac1ee27708327d8f4d2543db5b1 424 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 83 94 6.7E-9 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMS64_05625 d2215ac1ee27708327d8f4d2543db5b1 424 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 141 155 6.7E-9 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMS64_07310 d131e17bdc399194d2826988d985bb0e 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 139 7.4E-23 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AMS64_07310 d131e17bdc399194d2826988d985bb0e 146 Pfam PF02050 Flagellar FliJ protein 17 139 1.7E-27 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AMS64_06430 529726d7989cca3d88f64353ff350e02 217 SUPERFAMILY SSF48613 1 211 1.34E-62 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMS64_06430 529726d7989cca3d88f64353ff350e02 217 Pfam PF14518 Iron-containing redox enzyme 39 205 3.3E-24 T 11-10-2018 AMS64_06430 529726d7989cca3d88f64353ff350e02 217 Gene3D G3DSA:1.20.910.10 2 216 9.6E-57 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMS64_06430 529726d7989cca3d88f64353ff350e02 217 SMART SM01236 73 170 2.5E-8 T 11-10-2018 AMS64_00765 8e65b6b6a4e8bef5fc4a27d238a6508c 429 Gene3D G3DSA:3.40.50.300 2 222 7.1E-67 T 11-10-2018 AMS64_00765 8e65b6b6a4e8bef5fc4a27d238a6508c 429 SMART SM00490 270 351 1.4E-33 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_00765 8e65b6b6a4e8bef5fc4a27d238a6508c 429 SMART SM00487 28 234 4.6E-49 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMS64_00765 8e65b6b6a4e8bef5fc4a27d238a6508c 429 Pfam PF00271 Helicase conserved C-terminal domain 242 351 1.5E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AMS64_00765 8e65b6b6a4e8bef5fc4a27d238a6508c 429 Gene3D G3DSA:3.40.50.300 232 411 4.9E-49 T 11-10-2018 AMS64_00765 8e65b6b6a4e8bef5fc4a27d238a6508c 429 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMS64_00765 8e65b6b6a4e8bef5fc4a27d238a6508c 429 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.276 T 11-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AMS64_00765 8e65b6b6a4e8bef5fc4a27d238a6508c 429 SUPERFAMILY SSF52540 84 365 1.28E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_00765 8e65b6b6a4e8bef5fc4a27d238a6508c 429 Pfam PF00270 DEAD/DEAH box helicase 33 206 6.8E-44 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMS64_15315 e9ffbba4af91ac51a4d7e57323f0ecfe 465 Pfam PF00245 Alkaline phosphatase 36 465 2.9E-106 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15315 e9ffbba4af91ac51a4d7e57323f0ecfe 465 PRINTS PR00113 Alkaline phosphatase signature 34 54 3.6E-43 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15315 e9ffbba4af91ac51a4d7e57323f0ecfe 465 PRINTS PR00113 Alkaline phosphatase signature 132 152 3.6E-43 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15315 e9ffbba4af91ac51a4d7e57323f0ecfe 465 PRINTS PR00113 Alkaline phosphatase signature 84 99 3.6E-43 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15315 e9ffbba4af91ac51a4d7e57323f0ecfe 465 PRINTS PR00113 Alkaline phosphatase signature 186 196 3.6E-43 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15315 e9ffbba4af91ac51a4d7e57323f0ecfe 465 PRINTS PR00113 Alkaline phosphatase signature 261 290 3.6E-43 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15315 e9ffbba4af91ac51a4d7e57323f0ecfe 465 SMART SM00098 35 465 3.4E-102 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMS64_15315 e9ffbba4af91ac51a4d7e57323f0ecfe 465 Gene3D G3DSA:3.40.720.10 16 465 2.0E-142 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMS64_15315 e9ffbba4af91ac51a4d7e57323f0ecfe 465 SUPERFAMILY SSF53649 31 465 1.17E-128 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMS64_14890 d5b892789c9808f2a502961605903de9 264 Gene3D G3DSA:1.25.10.10 160 264 2.2E-19 T 11-10-2018 IPR011989 Armadillo-like helical AMS64_14890 d5b892789c9808f2a502961605903de9 264 Gene3D G3DSA:1.25.10.10 3 159 5.3E-27 T 11-10-2018 IPR011989 Armadillo-like helical AMS64_14890 d5b892789c9808f2a502961605903de9 264 SUPERFAMILY SSF48371 123 259 4.11E-17 T 11-10-2018 IPR016024 Armadillo-type fold AMS64_14890 d5b892789c9808f2a502961605903de9 264 SUPERFAMILY SSF48371 21 149 5.76E-11 T 11-10-2018 IPR016024 Armadillo-type fold AMS64_21420 f8c0deca9285e2af9e238f6513238420 557 Pfam PF07655 Secretin N-terminal domain 149 249 6.1E-27 T 11-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 AMS64_21420 f8c0deca9285e2af9e238f6513238420 557 Gene3D G3DSA:3.55.50.30 55 152 1.6E-7 T 11-10-2018 AMS64_21420 f8c0deca9285e2af9e238f6513238420 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 521 535 4.9E-16 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_21420 f8c0deca9285e2af9e238f6513238420 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 350 374 4.9E-16 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_21420 f8c0deca9285e2af9e238f6513238420 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 498 516 4.9E-16 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_21420 f8c0deca9285e2af9e238f6513238420 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 278 288 4.9E-16 T 11-10-2018 IPR001775 GspD/PilQ family AMS64_21420 f8c0deca9285e2af9e238f6513238420 557 Pfam PF00263 Bacterial type II and III secretion system protein 355 534 5.3E-39 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AMS64_21420 f8c0deca9285e2af9e238f6513238420 557 SMART SM00965 97 145 1.6E-4 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AMS64_21420 f8c0deca9285e2af9e238f6513238420 557 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 244 533 2.6E-87 T 11-10-2018 IPR013358 Pilus biogenesis, MshL AMS64_08350 e0c643f20c930a9b53c05bb01493ece0 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 318 1.8E-137 T 11-10-2018 IPR017566 NrfD AMS64_08350 e0c643f20c930a9b53c05bb01493ece0 318 Pfam PF03916 Polysulphide reductase, NrfD 6 317 5.1E-88 T 11-10-2018 IPR005614 NrfD family AMS64_08350 e0c643f20c930a9b53c05bb01493ece0 318 Gene3D G3DSA:1.20.1630.10 3 226 8.3E-16 T 11-10-2018 AMS64_16795 b24761b7d08bea1144aad2ad9097feb3 225 Gene3D G3DSA:2.60.120.10 17 143 8.6E-15 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_16795 b24761b7d08bea1144aad2ad9097feb3 225 Pfam PF00027 Cyclic nucleotide-binding domain 34 116 2.0E-10 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_16795 b24761b7d08bea1144aad2ad9097feb3 225 SUPERFAMILY SSF51206 26 142 6.02E-19 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMS64_10515 56a8cfe86b393241e7f45ab1f8f575ea 378 SUPERFAMILY SSF53474 14 377 3.31E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_10515 56a8cfe86b393241e7f45ab1f8f575ea 378 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 67 350 5.3E-8 T 11-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AMS64_10515 56a8cfe86b393241e7f45ab1f8f575ea 378 Gene3D G3DSA:1.10.10.800 195 305 5.3E-105 T 11-10-2018 AMS64_10515 56a8cfe86b393241e7f45ab1f8f575ea 378 Gene3D G3DSA:3.40.50.1820 61 359 5.3E-105 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 410 1.5E-36 T 11-10-2018 IPR000160 GGDEF domain AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 Gene3D G3DSA:3.40.50.2300 122 252 3.8E-29 T 11-10-2018 AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 SUPERFAMILY SSF52172 122 260 3.27E-28 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 SMART SM00267 243 411 2.9E-58 T 11-10-2018 IPR000160 GGDEF domain AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 SMART SM00448 3 111 4.3E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 SMART SM00448 123 237 4.9E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 SUPERFAMILY SSF55073 259 409 1.49E-39 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 Pfam PF00072 Response regulator receiver domain 125 236 3.6E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 Pfam PF00072 Response regulator receiver domain 5 104 6.9E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 Gene3D G3DSA:3.40.50.2300 1 121 1.3E-23 T 11-10-2018 AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 7.5E-35 T 11-10-2018 IPR000160 GGDEF domain AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 Gene3D G3DSA:3.30.70.270 253 413 3.9E-44 T 11-10-2018 AMS64_11160 1727e0ee45ff7ba41d48bae56cd90022 415 SUPERFAMILY SSF52172 2 107 2.13E-16 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_10785 c13a959bdcf1fd8bfc11fb2d7b49fccc 103 Pfam PF04341 Protein of unknown function, DUF485 10 98 2.9E-34 T 11-10-2018 IPR007436 Protein of unknown function DUF485 AMS64_05855 27a13c8a9f6c9254c01086f948cf2fb4 266 SUPERFAMILY SSF75516 13 177 2.22E-35 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AMS64_05855 27a13c8a9f6c9254c01086f948cf2fb4 266 Pfam PF00196 Bacterial regulatory proteins, luxR family 188 243 1.7E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_05855 27a13c8a9f6c9254c01086f948cf2fb4 266 Gene3D G3DSA:1.10.10.10 184 249 9.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_05855 27a13c8a9f6c9254c01086f948cf2fb4 266 Pfam PF03472 Autoinducer binding domain 27 174 1.8E-33 T 11-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMS64_05855 27a13c8a9f6c9254c01086f948cf2fb4 266 Gene3D G3DSA:3.30.450.80 12 181 2.0E-42 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AMS64_05855 27a13c8a9f6c9254c01086f948cf2fb4 266 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 203 2.9E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_05855 27a13c8a9f6c9254c01086f948cf2fb4 266 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 219 2.9E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_05855 27a13c8a9f6c9254c01086f948cf2fb4 266 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 219 231 2.9E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_05855 27a13c8a9f6c9254c01086f948cf2fb4 266 SMART SM00421 186 243 3.1E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_05855 27a13c8a9f6c9254c01086f948cf2fb4 266 ProSitePatterns PS00622 LuxR-type HTH domain signature. 203 230 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMS64_05855 27a13c8a9f6c9254c01086f948cf2fb4 266 SUPERFAMILY SSF46894 176 249 1.02E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_06945 3f6d4db0ec06ca7b4622056f090a56a9 82 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_06945 3f6d4db0ec06ca7b4622056f090a56a9 82 Pfam PF12838 4Fe-4S dicluster domain 8 57 3.4E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_06945 3f6d4db0ec06ca7b4622056f090a56a9 82 SUPERFAMILY SSF54862 4 76 2.42E-19 T 11-10-2018 AMS64_06945 3f6d4db0ec06ca7b4622056f090a56a9 82 Gene3D G3DSA:3.30.70.20 2 82 1.3E-34 T 11-10-2018 AMS64_18955 a480cc70e81c1d4758846acab2fc9f8c 237 SUPERFAMILY SSF46894 132 232 7.09E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_18955 a480cc70e81c1d4758846acab2fc9f8c 237 Gene3D G3DSA:1.10.10.10 127 235 4.8E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_18955 a480cc70e81c1d4758846acab2fc9f8c 237 Pfam PF00072 Response regulator receiver domain 5 113 2.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_18955 a480cc70e81c1d4758846acab2fc9f8c 237 SMART SM00448 3 113 1.3E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_18955 a480cc70e81c1d4758846acab2fc9f8c 237 SMART SM00862 155 231 7.5E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_18955 a480cc70e81c1d4758846acab2fc9f8c 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 4.7E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_18955 a480cc70e81c1d4758846acab2fc9f8c 237 SUPERFAMILY SSF52172 2 123 7.54E-37 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_18955 a480cc70e81c1d4758846acab2fc9f8c 237 Gene3D G3DSA:3.40.50.2300 1 126 1.7E-33 T 11-10-2018 AMS64_09890 364bffbc641ed57213168ef1f715f6be 128 Gene3D G3DSA:1.20.120.550 1 127 2.4E-23 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMS64_09890 364bffbc641ed57213168ef1f715f6be 128 Pfam PF01124 MAPEG family 6 121 2.5E-22 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMS64_09890 364bffbc641ed57213168ef1f715f6be 128 SUPERFAMILY SSF161084 2 125 5.76E-24 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMS64_12160 afc6c4321d2f5185d36afba2dd5f65f3 180 Pfam PF03589 Antitermination protein 93 168 4.3E-7 T 11-10-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 AMS64_12160 afc6c4321d2f5185d36afba2dd5f65f3 180 Gene3D G3DSA:3.30.260.20 34 180 4.5E-38 T 11-10-2018 AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 SUPERFAMILY SSF55874 455 563 7.47E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 SUPERFAMILY SSF158472 178 225 1.23E-7 T 11-10-2018 AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 38 128 8.7E-17 T 11-10-2018 IPR029095 NarX-like, N-terminal AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 Gene3D G3DSA:1.20.120.960 41 148 1.7E-11 T 11-10-2018 AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 SMART SM00387 472 566 8.0E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 SMART SM00304 176 228 2.9E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 Gene3D G3DSA:1.10.287.130 174 290 1.7E-7 T 11-10-2018 AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 564 8.2E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 Pfam PF00672 HAMP domain 178 223 3.5E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 Gene3D G3DSA:3.30.565.10 432 566 5.8E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 PIRSF PIRSF003167 1 299 1.7E-70 T 11-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 PIRSF PIRSF003167 289 570 4.6E-91 T 11-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AMS64_13515 5aa83e7752dca5f3bfced265be7027f0 570 Pfam PF07730 Histidine kinase 367 431 2.7E-18 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMS64_12540 871b78c684f2661a82f98f8d6eb8b690 280 Gene3D G3DSA:3.40.190.10 92 254 5.5E-47 T 11-10-2018 AMS64_12540 871b78c684f2661a82f98f8d6eb8b690 280 SUPERFAMILY SSF53850 89 278 5.32E-29 T 11-10-2018 AMS64_12540 871b78c684f2661a82f98f8d6eb8b690 280 Gene3D G3DSA:3.40.190.10 158 248 5.5E-47 T 11-10-2018 AMS64_12540 871b78c684f2661a82f98f8d6eb8b690 280 SUPERFAMILY SSF46785 2 107 1.59E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_12540 871b78c684f2661a82f98f8d6eb8b690 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.6E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12540 871b78c684f2661a82f98f8d6eb8b690 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.6E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12540 871b78c684f2661a82f98f8d6eb8b690 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.6E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12540 871b78c684f2661a82f98f8d6eb8b690 280 Pfam PF03466 LysR substrate binding domain 89 276 1.3E-29 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_12540 871b78c684f2661a82f98f8d6eb8b690 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 7.0E-23 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12540 871b78c684f2661a82f98f8d6eb8b690 280 Gene3D G3DSA:1.10.10.10 1 89 1.6E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_21440 b4d0adcbf571e9b306862b7914bef9a3 287 SUPERFAMILY SSF53067 42 143 1.14E-6 T 11-10-2018 AMS64_21440 b4d0adcbf571e9b306862b7914bef9a3 287 Gene3D G3DSA:3.30.1490.300 71 129 7.5E-6 T 11-10-2018 AMS64_21440 b4d0adcbf571e9b306862b7914bef9a3 287 Gene3D G3DSA:3.30.420.40 163 265 7.5E-6 T 11-10-2018 AMS64_21440 b4d0adcbf571e9b306862b7914bef9a3 287 Gene3D G3DSA:3.30.420.40 37 162 7.5E-6 T 11-10-2018 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 SUPERFAMILY SSF82866 312 513 4.71E-38 T 11-10-2018 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 Gene3D G3DSA:3.30.70.1320 150 347 3.6E-233 T 11-10-2018 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 Gene3D G3DSA:1.20.1640.10 30 528 3.6E-233 T 11-10-2018 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 Gene3D G3DSA:3.30.2090.10 198 289 3.6E-233 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 SUPERFAMILY SSF82693 54 148 9.94E-19 T 11-10-2018 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 Gene3D G3DSA:3.30.2090.10 740 830 3.6E-233 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 4.2E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 PRINTS PR00702 Acriflavin resistance protein family signature 379 400 4.2E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 4.2E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 4.2E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 PRINTS PR00702 Acriflavin resistance protein family signature 486 509 4.2E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 PRINTS PR00702 Acriflavin resistance protein family signature 407 431 4.2E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 SUPERFAMILY SSF82693 165 345 1.41E-12 T 11-10-2018 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 Gene3D G3DSA:1.20.1640.10 529 1047 3.6E-233 T 11-10-2018 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 SUPERFAMILY SSF82714 739 825 3.14E-8 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 Gene3D G3DSA:3.30.70.1440 692 897 3.6E-233 T 11-10-2018 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 SUPERFAMILY SSF82866 827 1053 1.96E-41 T 11-10-2018 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 SUPERFAMILY SSF82693 577 691 5.49E-15 T 11-10-2018 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 SUPERFAMILY SSF82714 203 284 1.02E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 Gene3D G3DSA:3.30.70.1430 54 838 3.6E-233 T 11-10-2018 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 Pfam PF00873 AcrB/AcrD/AcrF family 27 1048 1.2E-156 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMS64_16425 4b622df2d077c66f92a77a88de88ae24 1054 Gene3D G3DSA:3.30.70.1430 581 691 3.6E-233 T 11-10-2018 AMS64_13430 eecd3b6de1091b165b4238c87779a1ae 341 Pfam PF06406 StbA protein 2 318 4.7E-101 T 11-10-2018 IPR009440 Plasmid segregation protein ParM/StbA AMS64_13430 eecd3b6de1091b165b4238c87779a1ae 341 Gene3D G3DSA:3.30.420.40 166 292 5.5E-87 T 11-10-2018 AMS64_13430 eecd3b6de1091b165b4238c87779a1ae 341 Gene3D G3DSA:3.30.420.40 2 165 5.5E-87 T 11-10-2018 AMS64_13430 eecd3b6de1091b165b4238c87779a1ae 341 SUPERFAMILY SSF53067 163 321 1.26E-21 T 11-10-2018 AMS64_13430 eecd3b6de1091b165b4238c87779a1ae 341 SUPERFAMILY SSF53067 2 156 4.32E-47 T 11-10-2018 AMS64_05695 88e4e1eef93224599f78db07cc0fe32f 289 SUPERFAMILY SSF52540 4 286 7.62E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_05695 88e4e1eef93224599f78db07cc0fe32f 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AMS64_05695 88e4e1eef93224599f78db07cc0fe32f 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.3E-29 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AMS64_05695 88e4e1eef93224599f78db07cc0fe32f 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.3E-29 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AMS64_05695 88e4e1eef93224599f78db07cc0fe32f 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.3E-29 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AMS64_05695 88e4e1eef93224599f78db07cc0fe32f 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.3E-29 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AMS64_05695 88e4e1eef93224599f78db07cc0fe32f 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.9E-71 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AMS64_05695 88e4e1eef93224599f78db07cc0fe32f 289 Gene3D G3DSA:3.40.50.300 1 289 1.6E-113 T 11-10-2018 AMS64_03345 22d5082923806d868b4c2fe81c31a06b 254 Pfam PF07729 FCD domain 99 226 1.7E-20 T 11-10-2018 IPR011711 GntR, C-terminal AMS64_03345 22d5082923806d868b4c2fe81c31a06b 254 Gene3D G3DSA:1.10.10.10 1 75 5.5E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_03345 22d5082923806d868b4c2fe81c31a06b 254 SUPERFAMILY SSF46785 8 82 2.8E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_03345 22d5082923806d868b4c2fe81c31a06b 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 7.9E-25 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_03345 22d5082923806d868b4c2fe81c31a06b 254 Gene3D G3DSA:1.20.120.530 97 236 6.9E-28 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMS64_03345 22d5082923806d868b4c2fe81c31a06b 254 SMART SM00895 99 227 2.6E-18 T 11-10-2018 IPR011711 GntR, C-terminal AMS64_03345 22d5082923806d868b4c2fe81c31a06b 254 SUPERFAMILY SSF48008 97 235 1.57E-20 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMS64_03345 22d5082923806d868b4c2fe81c31a06b 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.3E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_03345 22d5082923806d868b4c2fe81c31a06b 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.3E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_03345 22d5082923806d868b4c2fe81c31a06b 254 SMART SM00345 15 74 3.6E-28 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMS64_13250 d839d5d9133086822edf11c72b1c47f5 229 Gene3D G3DSA:1.20.1080.10 1 227 2.3E-83 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMS64_13250 d839d5d9133086822edf11c72b1c47f5 229 SUPERFAMILY SSF81338 2 223 1.13E-66 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMS64_13250 d839d5d9133086822edf11c72b1c47f5 229 Pfam PF00230 Major intrinsic protein 2 221 3.2E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_13250 d839d5d9133086822edf11c72b1c47f5 229 ProSitePatterns PS00221 MIP family signature. 60 68 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 AMS64_13250 d839d5d9133086822edf11c72b1c47f5 229 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 1.6E-59 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_13250 d839d5d9133086822edf11c72b1c47f5 229 PRINTS PR00783 Major intrinsic protein family signature 165 187 6.8E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_13250 d839d5d9133086822edf11c72b1c47f5 229 PRINTS PR00783 Major intrinsic protein family signature 2 21 6.8E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_13250 d839d5d9133086822edf11c72b1c47f5 229 PRINTS PR00783 Major intrinsic protein family signature 135 153 6.8E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_13250 d839d5d9133086822edf11c72b1c47f5 229 PRINTS PR00783 Major intrinsic protein family signature 42 66 6.8E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_13250 d839d5d9133086822edf11c72b1c47f5 229 PRINTS PR00783 Major intrinsic protein family signature 204 224 6.8E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_13250 d839d5d9133086822edf11c72b1c47f5 229 PRINTS PR00783 Major intrinsic protein family signature 79 98 6.8E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMS64_13250 d839d5d9133086822edf11c72b1c47f5 229 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 35.871 T 11-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 AMS64_08015 bead27425b17f0f83f3b0af22842463d 185 Pfam PF13689 Domain of unknown function (DUF4154) 41 179 4.4E-30 T 11-10-2018 IPR025293 YfiR-like AMS64_19625 35360407560b6e5723f926348ffe37f7 325 SUPERFAMILY SSF111369 35 122 1.31E-5 T 11-10-2018 AMS64_19625 35360407560b6e5723f926348ffe37f7 325 Gene3D G3DSA:2.40.50.100 42 240 2.3E-29 T 11-10-2018 AMS64_19625 35360407560b6e5723f926348ffe37f7 325 Gene3D G3DSA:2.40.30.170 33 321 2.3E-29 T 11-10-2018 AMS64_19625 35360407560b6e5723f926348ffe37f7 325 Pfam PF13437 HlyD family secretion protein 206 282 2.9E-5 T 11-10-2018 AMS64_19625 35360407560b6e5723f926348ffe37f7 325 Gene3D G3DSA:1.10.287.470 76 205 2.3E-29 T 11-10-2018 AMS64_19625 35360407560b6e5723f926348ffe37f7 325 Pfam PF13533 Biotin-lipoyl like 45 89 9.0E-9 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMS64_09910 8a28e345b8525e0d39fd78458fca6e46 362 Pfam PF01264 Chorismate synthase 10 345 6.4E-143 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMS64_09910 8a28e345b8525e0d39fd78458fca6e46 362 SUPERFAMILY SSF103263 4 352 1.83E-149 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMS64_09910 8a28e345b8525e0d39fd78458fca6e46 362 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.3E-143 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMS64_09910 8a28e345b8525e0d39fd78458fca6e46 362 Gene3D G3DSA:3.60.150.10 1 361 4.7E-158 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMS64_09910 8a28e345b8525e0d39fd78458fca6e46 362 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMS64_09910 8a28e345b8525e0d39fd78458fca6e46 362 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.659 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMS64_09910 8a28e345b8525e0d39fd78458fca6e46 362 PIRSF PIRSF001456 3 361 1.2E-142 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMS64_09910 8a28e345b8525e0d39fd78458fca6e46 362 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMS64_09910 8a28e345b8525e0d39fd78458fca6e46 362 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMS64_04490 5d8e07f8bd6cf48e2c6f26da3cb07e29 148 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 146 6.4E-24 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMS64_04490 5d8e07f8bd6cf48e2c6f26da3cb07e29 148 Gene3D G3DSA:3.30.420.270 58 137 7.6E-22 T 11-10-2018 AMS64_04490 5d8e07f8bd6cf48e2c6f26da3cb07e29 148 TIGRFAM TIGR02801 tolR: protein TolR 12 145 1.7E-39 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 AMS64_04490 5d8e07f8bd6cf48e2c6f26da3cb07e29 148 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 3 145 27.713 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 AMS64_20980 4a809afaad0bc77a46b7fa18a16a6190 94 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 1 89 0.003 T 11-10-2018 IPR020317 Uncharacterised protein family YjbD AMS64_20980 4a809afaad0bc77a46b7fa18a16a6190 94 Pfam PF11656 YjbD family (DUF3811) 2 94 1.2E-26 T 11-10-2018 IPR020317 Uncharacterised protein family YjbD AMS64_19070 b1c6d1e9b9acf54103ab784fb3cec76a 211 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 143 210 4.2E-12 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AMS64_19070 b1c6d1e9b9acf54103ab784fb3cec76a 211 Gene3D G3DSA:3.30.1150.10 115 210 2.0E-19 T 11-10-2018 AMS64_19070 b1c6d1e9b9acf54103ab784fb3cec76a 211 SUPERFAMILY SSF74653 124 208 7.19E-16 T 11-10-2018 AMS64_19070 b1c6d1e9b9acf54103ab784fb3cec76a 211 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 135 209 1.5E-15 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMS64_16525 10982f695fa9a963a26779600e7786d7 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 370 2.0E-50 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_16525 10982f695fa9a963a26779600e7786d7 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 260 2.4E-16 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMS64_16525 10982f695fa9a963a26779600e7786d7 387 Gene3D G3DSA:2.40.30.170 47 310 2.0E-89 T 11-10-2018 AMS64_16525 10982f695fa9a963a26779600e7786d7 387 Gene3D G3DSA:1.10.287.470 92 183 2.0E-89 T 11-10-2018 AMS64_16525 10982f695fa9a963a26779600e7786d7 387 Gene3D G3DSA:2.40.420.20 43 370 2.0E-89 T 11-10-2018 AMS64_16525 10982f695fa9a963a26779600e7786d7 387 SUPERFAMILY SSF111369 50 280 9.94E-23 T 11-10-2018 AMS64_16525 10982f695fa9a963a26779600e7786d7 387 Gene3D G3DSA:2.40.50.100 58 220 2.0E-89 T 11-10-2018 AMS64_17640 a349c112d353b65ae757db342caf6aac 1124 PIRSF PIRSF005719 1 545 1.1E-114 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein AMS64_17640 a349c112d353b65ae757db342caf6aac 1124 PIRSF PIRSF005719 563 1123 2.5E-120 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein AMS64_17640 a349c112d353b65ae757db342caf6aac 1124 Gene3D G3DSA:3.40.50.300 1 236 5.7E-49 T 11-10-2018 AMS64_17640 a349c112d353b65ae757db342caf6aac 1124 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1116 21.739 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AMS64_17640 a349c112d353b65ae757db342caf6aac 1124 SUPERFAMILY SSF52540 1 1116 1.47E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_17640 a349c112d353b65ae757db342caf6aac 1124 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1107 1.1E-66 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMS64_17640 a349c112d353b65ae757db342caf6aac 1124 Gene3D G3DSA:3.40.50.300 889 1123 6.6E-46 T 11-10-2018 AMS64_16590 f473263a38f0a7055eb31fb1d02c4cc4 318 SUPERFAMILY SSF51735 6 312 4.16E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_16590 f473263a38f0a7055eb31fb1d02c4cc4 318 Gene3D G3DSA:3.40.50.720 7 313 9.8E-61 T 11-10-2018 AMS64_16590 f473263a38f0a7055eb31fb1d02c4cc4 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 225 1.5E-29 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMS64_10150 80129f02faa93a5f43f82c54092d2973 437 Gene3D G3DSA:3.20.20.70 15 411 7.8E-109 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_10150 80129f02faa93a5f43f82c54092d2973 437 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 408 2.6E-148 T 11-10-2018 AMS64_10150 80129f02faa93a5f43f82c54092d2973 437 SUPERFAMILY SSF102114 25 372 8.89E-37 T 11-10-2018 AMS64_10150 80129f02faa93a5f43f82c54092d2973 437 Pfam PF04055 Radical SAM superfamily 25 189 1.9E-9 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_10150 80129f02faa93a5f43f82c54092d2973 437 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 252 323 1.0E-6 T 11-10-2018 AMS64_10150 80129f02faa93a5f43f82c54092d2973 437 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 1.7E-17 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AMS64_10150 80129f02faa93a5f43f82c54092d2973 437 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 8.2E-9 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AMS64_04135 5ee823aa9eb0f0705e2b91db716f9128 296 Pfam PF03466 LysR substrate binding domain 87 287 1.5E-22 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_04135 5ee823aa9eb0f0705e2b91db716f9128 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.7E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04135 5ee823aa9eb0f0705e2b91db716f9128 296 SUPERFAMILY SSF46785 2 84 1.03E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_04135 5ee823aa9eb0f0705e2b91db716f9128 296 SUPERFAMILY SSF53850 92 292 7.24E-25 T 11-10-2018 AMS64_04135 5ee823aa9eb0f0705e2b91db716f9128 296 Gene3D G3DSA:1.10.10.10 5 94 3.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_04135 5ee823aa9eb0f0705e2b91db716f9128 296 Gene3D G3DSA:3.40.190.10 159 259 2.9E-37 T 11-10-2018 AMS64_04135 5ee823aa9eb0f0705e2b91db716f9128 296 Gene3D G3DSA:3.40.190.10 100 286 2.9E-37 T 11-10-2018 AMS64_04135 5ee823aa9eb0f0705e2b91db716f9128 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04135 5ee823aa9eb0f0705e2b91db716f9128 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_04135 5ee823aa9eb0f0705e2b91db716f9128 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_11290 aad36062e80faa471fa24b33e21a17af 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 442 1.3E-165 T 11-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AMS64_11290 aad36062e80faa471fa24b33e21a17af 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 441 2.9E-160 T 11-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AMS64_01380 f5ca3e2e1f6001a589a1defbe958ec06 393 SUPERFAMILY SSF53756 5 372 1.31E-58 T 11-10-2018 AMS64_01380 f5ca3e2e1f6001a589a1defbe958ec06 393 Pfam PF00534 Glycosyl transferases group 1 196 347 1.1E-25 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMS64_01380 f5ca3e2e1f6001a589a1defbe958ec06 393 Gene3D G3DSA:3.40.50.2000 75 369 2.0E-48 T 11-10-2018 AMS64_01380 f5ca3e2e1f6001a589a1defbe958ec06 393 Pfam PF13439 Glycosyltransferase Family 4 15 184 7.4E-7 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMS64_01380 f5ca3e2e1f6001a589a1defbe958ec06 393 Gene3D G3DSA:3.40.50.2000 181 358 2.0E-48 T 11-10-2018 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 Gene3D G3DSA:3.30.420.40 198 399 1.1E-83 T 11-10-2018 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 Hamap MF_00020 Acetate kinase [ackA]. 1 399 186.596 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 PIRSF PIRSF000722 1 399 2.6E-145 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 SUPERFAMILY SSF53067 3 198 1.04E-62 T 11-10-2018 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 205 222 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 PRINTS PR00471 Acetate kinase family signature 301 314 3.1E-49 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 PRINTS PR00471 Acetate kinase family signature 324 340 3.1E-49 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 PRINTS PR00471 Acetate kinase family signature 379 391 3.1E-49 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 PRINTS PR00471 Acetate kinase family signature 5 16 3.1E-49 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 PRINTS PR00471 Acetate kinase family signature 175 188 3.1E-49 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 PRINTS PR00471 Acetate kinase family signature 205 226 3.1E-49 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 Gene3D G3DSA:3.30.420.40 2 197 6.1E-74 T 11-10-2018 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 Pfam PF00871 Acetokinase family 5 392 3.3E-160 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 SUPERFAMILY SSF53067 159 397 7.96E-87 T 11-10-2018 AMS64_05080 4c08043737dff60eb1a3fd803e612414 399 TIGRFAM TIGR00016 ackA: acetate kinase 2 397 3.5E-170 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMS64_02195 ae19bdfdb81fcffac0a4d4b61b0864ca 254 Gene3D G3DSA:1.10.260.40 4 73 4.6E-7 T 11-10-2018 AMS64_02195 ae19bdfdb81fcffac0a4d4b61b0864ca 254 SUPERFAMILY SSF47413 10 73 6.26E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_02195 ae19bdfdb81fcffac0a4d4b61b0864ca 254 SMART SM00530 14 68 0.0044 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_02195 ae19bdfdb81fcffac0a4d4b61b0864ca 254 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 15 74 3.8E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_12805 c71a310bf464064e618675b671313208 325 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.2E-161 T 11-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like AMS64_12805 c71a310bf464064e618675b671313208 325 SUPERFAMILY SSF53335 91 322 8.88E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_12805 c71a310bf464064e618675b671313208 325 Gene3D G3DSA:3.40.50.150 101 293 1.0E-22 T 11-10-2018 AMS64_12805 c71a310bf464064e618675b671313208 325 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 321 4.1E-150 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AMS64_12805 c71a310bf464064e618675b671313208 325 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 55.395 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 11 18 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 Pfam PF00012 Hsp70 protein 8 80 2.5E-18 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 Pfam PF00012 Hsp70 protein 86 480 7.6E-92 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 Gene3D G3DSA:3.30.420.40 164 331 7.5E-102 T 11-10-2018 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 Gene3D G3DSA:3.90.640.10 203 273 7.5E-102 T 11-10-2018 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 SUPERFAMILY SSF53067 7 162 5.18E-48 T 11-10-2018 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 Gene3D G3DSA:3.30.420.40 9 341 7.5E-102 T 11-10-2018 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 PRINTS PR00301 70kDa heat shock protein signature 7 20 1.1E-37 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 PRINTS PR00301 70kDa heat shock protein signature 118 138 1.1E-37 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 PRINTS PR00301 70kDa heat shock protein signature 298 314 1.1E-37 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 PRINTS PR00301 70kDa heat shock protein signature 354 373 1.1E-37 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 PRINTS PR00301 70kDa heat shock protein signature 437 453 1.1E-37 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 PRINTS PR00301 70kDa heat shock protein signature 35 47 1.1E-37 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 PRINTS PR00301 70kDa heat shock protein signature 177 187 1.1E-37 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 PRINTS PR00301 70kDa heat shock protein signature 329 349 1.1E-37 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 Gene3D G3DSA:2.60.34.10 342 525 2.5E-32 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 SUPERFAMILY SSF53067 9 346 2.3E-38 T 11-10-2018 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 171 184 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMS64_06685 a2fb822e0a5bbdc0bb068ab1079426ef 557 SUPERFAMILY SSF100920 352 492 4.71E-26 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AMS64_10905 b4c67e70d593463bd9a86c285380a91b 305 SUPERFAMILY SSF103481 189 285 7.72E-15 T 11-10-2018 AMS64_10905 b4c67e70d593463bd9a86c285380a91b 305 Pfam PF00892 EamA-like transporter family 10 137 1.7E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_10905 b4c67e70d593463bd9a86c285380a91b 305 Pfam PF00892 EamA-like transporter family 152 282 3.4E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_10905 b4c67e70d593463bd9a86c285380a91b 305 SUPERFAMILY SSF103481 38 140 9.81E-16 T 11-10-2018 AMS64_01920 fbc279b31355c727904f7e5ae1fc977a 255 Pfam PF12118 SprA-related family 19 218 1.1E-45 T 11-10-2018 IPR021973 SprA-related family AMS64_17935 ed785522645fe717315d764d974e7afe 331 Pfam PF01882 Protein of unknown function DUF58 217 290 3.0E-8 T 11-10-2018 IPR002881 Domain of unknown function DUF58 AMS64_01150 c30f44f8f530160b1b8c4ac9dbee5d97 400 SUPERFAMILY SSF52507 3 179 9.29E-62 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMS64_01150 c30f44f8f530160b1b8c4ac9dbee5d97 400 Gene3D G3DSA:3.40.50.1950 1 183 3.9E-57 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMS64_01150 c30f44f8f530160b1b8c4ac9dbee5d97 400 SUPERFAMILY SSF102645 185 398 1.15E-78 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AMS64_01150 c30f44f8f530160b1b8c4ac9dbee5d97 400 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 394 1.1E-148 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AMS64_01150 c30f44f8f530160b1b8c4ac9dbee5d97 400 Gene3D G3DSA:3.40.50.10300 184 400 4.2E-80 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AMS64_01150 c30f44f8f530160b1b8c4ac9dbee5d97 400 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 8.2E-75 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AMS64_01150 c30f44f8f530160b1b8c4ac9dbee5d97 400 Pfam PF02441 Flavoprotein 6 180 4.6E-46 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AMS64_13105 a410b99be33949582b9dff0f5bee9ad6 240 Pfam PF08241 Methyltransferase domain 79 125 1.6E-7 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMS64_13105 a410b99be33949582b9dff0f5bee9ad6 240 SUPERFAMILY SSF53335 78 191 2.26E-16 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_13105 a410b99be33949582b9dff0f5bee9ad6 240 Gene3D G3DSA:3.40.50.150 53 179 5.8E-13 T 11-10-2018 AMS64_22185 87dcec99734f46c39373b5a61c44bcaa 387 SUPERFAMILY SSF56796 1 366 1.03E-104 T 11-10-2018 AMS64_22185 87dcec99734f46c39373b5a61c44bcaa 387 Gene3D G3DSA:3.40.50.1970 1 184 4.5E-48 T 11-10-2018 AMS64_22185 87dcec99734f46c39373b5a61c44bcaa 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 356 2.8E-89 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AMS64_22185 87dcec99734f46c39373b5a61c44bcaa 387 Gene3D G3DSA:1.20.1090.10 185 387 9.8E-46 T 11-10-2018 AMS64_22185 87dcec99734f46c39373b5a61c44bcaa 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMS64_22185 87dcec99734f46c39373b5a61c44bcaa 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMS64_17050 9a67e4598c993a221aa4f28d402971ea 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 9.8E-37 T 11-10-2018 IPR021724 Protein of unknown function DUF3297 AMS64_15280 e01677c432d31434e98b7102b982d3c4 357 SUPERFAMILY SSF51569 8 346 4.67E-135 T 11-10-2018 AMS64_15280 e01677c432d31434e98b7102b982d3c4 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 11 347 9.8E-155 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMS64_15280 e01677c432d31434e98b7102b982d3c4 357 Gene3D G3DSA:3.20.20.70 4 350 9.6E-153 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_15280 e01677c432d31434e98b7102b982d3c4 357 Pfam PF00793 DAHP synthetase I family 40 339 6.8E-99 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMS64_15280 e01677c432d31434e98b7102b982d3c4 357 PIRSF PIRSF001361 1 353 2.2E-158 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMS64_19595 79de26053a4ce2bf9d84ea2a559eeb5c 323 Gene3D G3DSA:3.40.50.12740 5 158 2.9E-35 T 11-10-2018 AMS64_19595 79de26053a4ce2bf9d84ea2a559eeb5c 323 SMART SM00448 6 117 5.5E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_19595 79de26053a4ce2bf9d84ea2a559eeb5c 323 Gene3D G3DSA:3.60.40.10 178 312 1.9E-6 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMS64_19595 79de26053a4ce2bf9d84ea2a559eeb5c 323 SUPERFAMILY SSF52172 5 131 1.85E-36 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_19595 79de26053a4ce2bf9d84ea2a559eeb5c 323 Pfam PF00072 Response regulator receiver domain 8 116 1.9E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_17645 8674b01404bcc0f3196f8f150a220288 254 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 17 233 1.6E-43 T 11-10-2018 AMS64_17645 8674b01404bcc0f3196f8f150a220288 254 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 11 251 28.79 T 11-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 AMS64_15955 845f65447729469a1c6779f66ee5e884 382 Gene3D G3DSA:3.60.120.10 11 374 4.0E-118 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AMS64_15955 845f65447729469a1c6779f66ee5e884 382 Pfam PF00425 chorismate binding enzyme 111 363 9.7E-75 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AMS64_15955 845f65447729469a1c6779f66ee5e884 382 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 370 6.1E-85 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AMS64_15955 845f65447729469a1c6779f66ee5e884 382 SUPERFAMILY SSF56322 45 373 3.27E-90 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AMS64_21850 b3b959f697889b93188f0a7c9c8bdb3d 376 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 8 176 2.4E-66 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AMS64_21850 b3b959f697889b93188f0a7c9c8bdb3d 376 SUPERFAMILY SSF46626 317 368 3.15E-5 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_21850 b3b959f697889b93188f0a7c9c8bdb3d 376 SUPERFAMILY SSF48695 10 178 1.54E-47 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AMS64_21850 b3b959f697889b93188f0a7c9c8bdb3d 376 Gene3D G3DSA:1.10.3820.10 4 181 2.5E-37 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily AMS64_21850 b3b959f697889b93188f0a7c9c8bdb3d 376 PIRSF PIRSF000014 3 376 4.8E-138 T 11-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AMS64_20230 4305e0acb75c0714aa3391e30cd6c05d 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMS64_20230 4305e0acb75c0714aa3391e30cd6c05d 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 85 4.4E-40 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMS64_20230 4305e0acb75c0714aa3391e30cd6c05d 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 4.5E-94 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMS64_20230 4305e0acb75c0714aa3391e30cd6c05d 264 Pfam PF00303 Thymidylate synthase 3 264 8.7E-127 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMS64_20230 4305e0acb75c0714aa3391e30cd6c05d 264 Gene3D G3DSA:3.30.572.10 1 264 1.8E-134 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMS64_20230 4305e0acb75c0714aa3391e30cd6c05d 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 4.4E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMS64_20230 4305e0acb75c0714aa3391e30cd6c05d 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 4.4E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMS64_20230 4305e0acb75c0714aa3391e30cd6c05d 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 4.4E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMS64_20230 4305e0acb75c0714aa3391e30cd6c05d 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 4.4E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMS64_20230 4305e0acb75c0714aa3391e30cd6c05d 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 4.4E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMS64_20230 4305e0acb75c0714aa3391e30cd6c05d 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.459 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMS64_20230 4305e0acb75c0714aa3391e30cd6c05d 264 SUPERFAMILY SSF55831 1 264 3.14E-131 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMS64_01985 4584137175f5c052bbdee3274aed7c26 114 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 1.4E-38 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMS64_01985 4584137175f5c052bbdee3274aed7c26 114 Gene3D G3DSA:3.90.470.10 1 113 1.4E-46 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AMS64_01985 4584137175f5c052bbdee3274aed7c26 114 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.8E-47 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01985 4584137175f5c052bbdee3274aed7c26 114 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMS64_01985 4584137175f5c052bbdee3274aed7c26 114 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.123 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01985 4584137175f5c052bbdee3274aed7c26 114 SUPERFAMILY SSF54843 1 110 5.49E-44 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 6.3E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 6.3E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 6.3E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 6.3E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 6.3E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 6.3E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 6.3E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 6.3E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 6.3E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 SUPERFAMILY SSF51905 2 313 1.19E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 Gene3D G3DSA:3.50.50.60 118 244 7.1E-129 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.1E-39 T 11-10-2018 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 7.1E-39 T 11-10-2018 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 7.1E-39 T 11-10-2018 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 7.1E-39 T 11-10-2018 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 7.1E-39 T 11-10-2018 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 Gene3D G3DSA:3.50.50.60 10 312 7.1E-129 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.9E-124 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMS64_11155 52bc082c1fda700c86f14d75cbf78f57 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 3.2E-49 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_19065 03f7dd877638b5a4ee36497139d4d90f 413 Gene3D G3DSA:1.25.40.10 143 286 5.9E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_19065 03f7dd877638b5a4ee36497139d4d90f 413 SMART SM00028 72 105 270.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_19065 03f7dd877638b5a4ee36497139d4d90f 413 SMART SM00028 289 322 79.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_19065 03f7dd877638b5a4ee36497139d4d90f 413 SMART SM00028 148 181 0.38 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_19065 03f7dd877638b5a4ee36497139d4d90f 413 SMART SM00028 358 391 55.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_19065 03f7dd877638b5a4ee36497139d4d90f 413 SUPERFAMILY SSF48452 292 387 1.39E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_19065 03f7dd877638b5a4ee36497139d4d90f 413 Pfam PF13432 Tetratricopeptide repeat 82 132 0.0036 T 11-10-2018 AMS64_19065 03f7dd877638b5a4ee36497139d4d90f 413 Pfam PF13432 Tetratricopeptide repeat 153 189 0.0027 T 11-10-2018 AMS64_19065 03f7dd877638b5a4ee36497139d4d90f 413 SUPERFAMILY SSF48452 75 247 7.59E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_19065 03f7dd877638b5a4ee36497139d4d90f 413 Gene3D G3DSA:1.25.40.10 287 392 8.0E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_19065 03f7dd877638b5a4ee36497139d4d90f 413 Gene3D G3DSA:1.25.40.10 22 142 8.0E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 SUPERFAMILY SSF46548 6 157 3.87E-40 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 471 1.1E-247 T 11-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.4E-35 T 11-10-2018 AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.4E-35 T 11-10-2018 AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 PRINTS PR00419 Adrenodoxin reductase family signature 323 336 2.4E-35 T 11-10-2018 AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 2.4E-35 T 11-10-2018 AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.4E-35 T 11-10-2018 AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 Gene3D G3DSA:3.40.50.720 146 252 1.8E-10 T 11-10-2018 AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 Gene3D G3DSA:1.10.1060.10 13 145 2.4E-33 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 458 4.7E-24 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 Gene3D G3DSA:3.50.50.60 253 399 8.3E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.7E-37 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AMS64_11805 ef7f273795a4dfdeea9e60ebffbb93e1 471 SUPERFAMILY SSF51971 145 400 3.59E-67 T 11-10-2018 AMS64_03160 ddf88c06c873cf99c3ff64fc42ea1c78 130 TIGRFAM TIGR00208 fliS: flagellar protein FliS 5 125 7.6E-22 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AMS64_03160 ddf88c06c873cf99c3ff64fc42ea1c78 130 Gene3D G3DSA:1.20.120.340 2 128 5.3E-38 T 11-10-2018 AMS64_03160 ddf88c06c873cf99c3ff64fc42ea1c78 130 Pfam PF02561 Flagellar protein FliS 10 125 1.1E-33 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AMS64_03160 ddf88c06c873cf99c3ff64fc42ea1c78 130 SUPERFAMILY SSF101116 11 127 8.11E-35 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 AMS64_03160 ddf88c06c873cf99c3ff64fc42ea1c78 130 PIRSF PIRSF039090 2 130 1.1E-41 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AMS64_14850 d6908bcd5d47ee40b716d9647ca5d89e 460 Pfam PF00324 Amino acid permease 18 441 9.6E-115 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AMS64_14850 d6908bcd5d47ee40b716d9647ca5d89e 460 PIRSF PIRSF006060 1 454 1.1E-72 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_14850 d6908bcd5d47ee40b716d9647ca5d89e 460 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AMS64_14850 d6908bcd5d47ee40b716d9647ca5d89e 460 Gene3D G3DSA:1.20.1740.10 9 458 4.4E-59 T 11-10-2018 AMS64_11600 65fb9ff06fa917037d4764fdfd02bb50 322 Pfam PF13464 Domain of unknown function (DUF4115) 246 319 2.3E-22 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 AMS64_11600 65fb9ff06fa917037d4764fdfd02bb50 322 SMART SM00530 21 82 0.0019 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_11600 65fb9ff06fa917037d4764fdfd02bb50 322 Gene3D G3DSA:1.10.260.40 8 116 5.7E-23 T 11-10-2018 AMS64_11600 65fb9ff06fa917037d4764fdfd02bb50 322 SUPERFAMILY SSF47413 18 58 2.96E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_11600 65fb9ff06fa917037d4764fdfd02bb50 322 Pfam PF13413 Helix-turn-helix domain 22 80 3.8E-19 T 11-10-2018 AMS64_02715 933f7a5b979b6f709bff3c98168d6632 276 SUPERFAMILY SSF54506 3 275 1.05E-53 T 11-10-2018 AMS64_02715 933f7a5b979b6f709bff3c98168d6632 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 38.981 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMS64_02715 933f7a5b979b6f709bff3c98168d6632 276 Pfam PF01678 Diaminopimelate epimerase 154 269 4.7E-30 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMS64_02715 933f7a5b979b6f709bff3c98168d6632 276 Pfam PF01678 Diaminopimelate epimerase 5 125 9.8E-34 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMS64_02715 933f7a5b979b6f709bff3c98168d6632 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMS64_02715 933f7a5b979b6f709bff3c98168d6632 276 Gene3D G3DSA:3.10.310.10 117 263 4.2E-106 T 11-10-2018 AMS64_02715 933f7a5b979b6f709bff3c98168d6632 276 Gene3D G3DSA:3.10.310.10 5 272 4.2E-106 T 11-10-2018 AMS64_02715 933f7a5b979b6f709bff3c98168d6632 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 274 2.7E-100 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMS64_17835 d7c4ea1dfca5535f9a3552b982f83a76 373 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 4 373 4.9E-139 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AMS64_17835 d7c4ea1dfca5535f9a3552b982f83a76 373 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 3 373 40.918 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AMS64_17835 d7c4ea1dfca5535f9a3552b982f83a76 373 Gene3D G3DSA:3.30.420.40 10 368 5.7E-127 T 11-10-2018 AMS64_17835 d7c4ea1dfca5535f9a3552b982f83a76 373 Gene3D G3DSA:3.30.420.40 142 333 5.7E-127 T 11-10-2018 AMS64_17835 d7c4ea1dfca5535f9a3552b982f83a76 373 SUPERFAMILY SSF53067 5 344 1.42E-18 T 11-10-2018 AMS64_03315 b7a14d2b50991da8a007bca3c4b5503a 413 Gene3D G3DSA:1.20.81.30 67 180 1.2E-28 T 11-10-2018 AMS64_03315 b7a14d2b50991da8a007bca3c4b5503a 413 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 173 201 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AMS64_03315 b7a14d2b50991da8a007bca3c4b5503a 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 74 86 3.0E-18 T 11-10-2018 IPR003004 GspF/PilC family AMS64_03315 b7a14d2b50991da8a007bca3c4b5503a 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 393 412 3.0E-18 T 11-10-2018 IPR003004 GspF/PilC family AMS64_03315 b7a14d2b50991da8a007bca3c4b5503a 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 377 391 3.0E-18 T 11-10-2018 IPR003004 GspF/PilC family AMS64_03315 b7a14d2b50991da8a007bca3c4b5503a 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 173 201 3.0E-18 T 11-10-2018 IPR003004 GspF/PilC family AMS64_03315 b7a14d2b50991da8a007bca3c4b5503a 413 Pfam PF00482 Type II secretion system (T2SS), protein F 282 404 1.8E-27 T 11-10-2018 IPR018076 Type II secretion system F domain AMS64_03315 b7a14d2b50991da8a007bca3c4b5503a 413 Pfam PF00482 Type II secretion system (T2SS), protein F 79 201 2.2E-32 T 11-10-2018 IPR018076 Type II secretion system F domain AMS64_03315 b7a14d2b50991da8a007bca3c4b5503a 413 Gene3D G3DSA:1.20.81.30 265 374 4.0E-26 T 11-10-2018 AMS64_09165 1a829dbbddb58b78b04900c2dede8259 394 Pfam PF01757 Acyltransferase family 11 361 1.8E-22 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMS64_06395 e6c1f92e6b580f792db49eb4e01096d7 161 Pfam PF05618 Putative ATP-dependant zinc protease 23 155 3.2E-33 T 11-10-2018 AMS64_06395 e6c1f92e6b580f792db49eb4e01096d7 161 Gene3D G3DSA:2.40.70.10 21 149 5.2E-37 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMS64_06395 e6c1f92e6b580f792db49eb4e01096d7 161 SUPERFAMILY SSF50630 23 155 9.52E-36 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMS64_04675 59b40eeac749eeabbac7cd661c70666e 307 SUPERFAMILY SSF117892 52 186 1.57E-37 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AMS64_04675 59b40eeac749eeabbac7cd661c70666e 307 PRINTS PR00721 Stomatin signature 76 97 1.3E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMS64_04675 59b40eeac749eeabbac7cd661c70666e 307 PRINTS PR00721 Stomatin signature 131 154 1.3E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMS64_04675 59b40eeac749eeabbac7cd661c70666e 307 PRINTS PR00721 Stomatin signature 174 195 1.3E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMS64_04675 59b40eeac749eeabbac7cd661c70666e 307 PRINTS PR00721 Stomatin signature 111 128 1.3E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMS64_04675 59b40eeac749eeabbac7cd661c70666e 307 PRINTS PR00721 Stomatin signature 155 173 1.3E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMS64_04675 59b40eeac749eeabbac7cd661c70666e 307 Pfam PF01145 SPFH domain / Band 7 family 25 194 1.7E-30 T 11-10-2018 IPR001107 Band 7 domain AMS64_04675 59b40eeac749eeabbac7cd661c70666e 307 SMART SM00244 21 179 3.8E-57 T 11-10-2018 IPR001107 Band 7 domain AMS64_04675 59b40eeac749eeabbac7cd661c70666e 307 Gene3D G3DSA:3.30.479.30 49 181 9.8E-41 T 11-10-2018 AMS64_13240 180bb659558f3b98031f23d05d78c9b1 146 Pfam PF13673 Acetyltransferase (GNAT) domain 24 110 4.7E-10 T 11-10-2018 IPR000182 GNAT domain AMS64_13240 180bb659558f3b98031f23d05d78c9b1 146 Gene3D G3DSA:3.40.630.30 3 131 1.7E-9 T 11-10-2018 AMS64_13240 180bb659558f3b98031f23d05d78c9b1 146 SUPERFAMILY SSF55729 1 109 2.1E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_18950 aa3bc2bf079d7c2f905b2575e8b42929 134 Gene3D G3DSA:2.170.150.70 4 115 1.3E-16 T 11-10-2018 AMS64_18950 aa3bc2bf079d7c2f905b2575e8b42929 134 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 113 2.4E-18 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AMS64_18950 aa3bc2bf079d7c2f905b2575e8b42929 134 SUPERFAMILY SSF51316 2 133 2.3E-42 T 11-10-2018 IPR011057 Mss4-like superfamily AMS64_12060 c7e1fdb8ef281a15af0c06c6a1b826ec 107 Pfam PF05521 Phage head-tail joining protein 7 102 3.6E-18 T 11-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor AMS64_12060 c7e1fdb8ef281a15af0c06c6a1b826ec 107 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 6 93 1.4E-13 T 11-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor AMS64_12060 c7e1fdb8ef281a15af0c06c6a1b826ec 107 Gene3D G3DSA:2.40.10.270 1 106 4.1E-28 T 11-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily AMS64_19510 45caf66318f7ad1726304b5d4b13f966 232 Pfam PF11813 Protein of unknown function (DUF3334) 10 232 4.1E-115 T 11-10-2018 IPR024513 Protein of unknown function DUF3334 AMS64_19510 45caf66318f7ad1726304b5d4b13f966 232 Gene3D G3DSA:3.40.1550.10 14 179 3.3E-18 T 11-10-2018 IPR028976 CheC-like superfamily AMS64_19510 45caf66318f7ad1726304b5d4b13f966 232 SUPERFAMILY SSF103039 15 178 1.28E-22 T 11-10-2018 IPR028976 CheC-like superfamily AMS64_15760 6043c98cb2dddaaff6ae5daf03a863c6 667 SUPERFAMILY SSF64518 450 666 3.01E-20 T 11-10-2018 AMS64_15760 6043c98cb2dddaaff6ae5daf03a863c6 667 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.7E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMS64_15760 6043c98cb2dddaaff6ae5daf03a863c6 667 PRINTS PR01005 Flagellar hook-associated protein signature 207 225 1.7E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMS64_15760 6043c98cb2dddaaff6ae5daf03a863c6 667 PRINTS PR01005 Flagellar hook-associated protein signature 116 136 1.7E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMS64_15760 6043c98cb2dddaaff6ae5daf03a863c6 667 PRINTS PR01005 Flagellar hook-associated protein signature 149 173 1.7E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMS64_15760 6043c98cb2dddaaff6ae5daf03a863c6 667 PRINTS PR01005 Flagellar hook-associated protein signature 404 421 1.7E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMS64_15760 6043c98cb2dddaaff6ae5daf03a863c6 667 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 609 664 7.6E-9 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMS64_15760 6043c98cb2dddaaff6ae5daf03a863c6 667 SUPERFAMILY SSF64518 127 431 9.81E-19 T 11-10-2018 AMS64_00195 d5aa55841f0d41fe54fc2cd2c6e380db 174 Pfam PF00210 Ferritin-like domain 7 142 2.1E-40 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMS64_00195 d5aa55841f0d41fe54fc2cd2c6e380db 174 SUPERFAMILY SSF47240 1 159 2.78E-59 T 11-10-2018 IPR009078 Ferritin-like superfamily AMS64_00195 d5aa55841f0d41fe54fc2cd2c6e380db 174 Gene3D G3DSA:1.20.1260.10 1 174 1.5E-51 T 11-10-2018 IPR012347 Ferritin-like AMS64_12630 4edd89da4f994b64d9ba88694500d019 321 Pfam PF03797 Autotransporter beta-domain 55 226 5.4E-6 T 11-10-2018 IPR005546 Autotransporter beta-domain AMS64_12630 4edd89da4f994b64d9ba88694500d019 321 Gene3D G3DSA:2.40.128.130 44 234 1.4E-6 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily AMS64_20330 ba941ac717c206fa5425da48b25a086c 246 PIRSF PIRSF039085 1 246 4.5E-86 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMS64_20330 ba941ac717c206fa5425da48b25a086c 246 SUPERFAMILY SSF52540 5 240 2.42E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_20330 ba941ac717c206fa5425da48b25a086c 246 SMART SM00382 27 222 1.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_20330 ba941ac717c206fa5425da48b25a086c 246 Gene3D G3DSA:3.40.50.300 2 246 1.5E-66 T 11-10-2018 AMS64_20330 ba941ac717c206fa5425da48b25a086c 246 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_20330 ba941ac717c206fa5425da48b25a086c 246 Pfam PF00005 ABC transporter 18 174 5.8E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_06375 16b1fee41fbf4f29c4cd211c0462d090 254 Pfam PF12048 Protein of unknown function (DUF3530) 105 249 2.0E-20 T 11-10-2018 IPR022529 Protein of unknown function DUF3530 AMS64_00340 809ace9ec537fb8ae19f915675621213 564 Pfam PF03814 Potassium-transporting ATPase A subunit 10 557 1.1E-220 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AMS64_00340 809ace9ec537fb8ae19f915675621213 564 PIRSF PIRSF001294 1 561 3.5E-222 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AMS64_00340 809ace9ec537fb8ae19f915675621213 564 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 559 32.244 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AMS64_00340 809ace9ec537fb8ae19f915675621213 564 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 9 559 1.5E-207 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AMS64_01610 b10840050cbac5b946e7bc6b50d0e14f 506 Pfam PF00005 ABC transporter 29 178 2.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_01610 b10840050cbac5b946e7bc6b50d0e14f 506 SMART SM00382 288 483 0.56 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_01610 b10840050cbac5b946e7bc6b50d0e14f 506 SMART SM00382 38 225 5.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_01610 b10840050cbac5b946e7bc6b50d0e14f 506 Gene3D G3DSA:3.40.50.300 1 247 1.5E-56 T 11-10-2018 AMS64_01610 b10840050cbac5b946e7bc6b50d0e14f 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_01610 b10840050cbac5b946e7bc6b50d0e14f 506 Pfam PF00005 ABC transporter 280 434 2.5E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_01610 b10840050cbac5b946e7bc6b50d0e14f 506 Gene3D G3DSA:3.40.50.300 262 500 5.0E-39 T 11-10-2018 AMS64_01610 b10840050cbac5b946e7bc6b50d0e14f 506 SUPERFAMILY SSF52540 254 492 6.19E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_01610 b10840050cbac5b946e7bc6b50d0e14f 506 SUPERFAMILY SSF52540 12 234 9.4E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_04355 d3334cc201c17658a86d01cf9d6019b0 142 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 6 141 2.0E-32 T 11-10-2018 IPR020206 Uncharacterised protein family, VP2110 AMS64_04355 d3334cc201c17658a86d01cf9d6019b0 142 Pfam PF10952 Protein of unknown function (DUF2753) 6 142 5.6E-61 T 11-10-2018 IPR020206 Uncharacterised protein family, VP2110 AMS64_18860 c2de6b1a2a588b8cd924705f40f07866 622 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMS64_18860 c2de6b1a2a588b8cd924705f40f07866 622 Pfam PF02779 Transketolase, pyrimidine binding domain 318 478 4.1E-40 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMS64_18860 c2de6b1a2a588b8cd924705f40f07866 622 SUPERFAMILY SSF52518 15 381 1.75E-76 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_18860 c2de6b1a2a588b8cd924705f40f07866 622 Gene3D G3DSA:3.40.50.970 317 488 3.1E-67 T 11-10-2018 AMS64_18860 c2de6b1a2a588b8cd924705f40f07866 622 Gene3D G3DSA:3.40.50.920 496 622 2.1E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMS64_18860 c2de6b1a2a588b8cd924705f40f07866 622 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 621 46.158 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMS64_18860 c2de6b1a2a588b8cd924705f40f07866 622 SMART SM00861 319 483 1.9E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMS64_18860 c2de6b1a2a588b8cd924705f40f07866 622 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 620 9.8E-296 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMS64_18860 c2de6b1a2a588b8cd924705f40f07866 622 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 15 282 1.8E-118 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMS64_18860 c2de6b1a2a588b8cd924705f40f07866 622 SUPERFAMILY SSF52922 493 620 1.44E-31 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMS64_18860 c2de6b1a2a588b8cd924705f40f07866 622 Pfam PF02780 Transketolase, C-terminal domain 496 612 1.8E-26 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AMS64_18860 c2de6b1a2a588b8cd924705f40f07866 622 SUPERFAMILY SSF52518 317 505 4.07E-60 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMS64_08390 f4bcf2691071698a61371b9b924e8958 120 Pfam PF02810 SEC-C motif 103 120 4.5E-9 T 11-10-2018 IPR004027 SEC-C motif AMS64_08390 f4bcf2691071698a61371b9b924e8958 120 Gene3D G3DSA:3.10.450.50 1 120 4.8E-45 T 11-10-2018 AMS64_08390 f4bcf2691071698a61371b9b924e8958 120 SUPERFAMILY SSF54427 1 93 2.54E-29 T 11-10-2018 IPR032710 NTF2-like domain superfamily AMS64_08390 f4bcf2691071698a61371b9b924e8958 120 SUPERFAMILY SSF103642 100 120 2.13E-7 T 11-10-2018 AMS64_04185 b58581117e9fec3d21233ce517c8b9be 159 SUPERFAMILY SSF46785 4 140 1.16E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_04185 b58581117e9fec3d21233ce517c8b9be 159 Gene3D G3DSA:1.10.10.10 1 143 4.0E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_04185 b58581117e9fec3d21233ce517c8b9be 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_04185 b58581117e9fec3d21233ce517c8b9be 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_04185 b58581117e9fec3d21233ce517c8b9be 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_04185 b58581117e9fec3d21233ce517c8b9be 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_04185 b58581117e9fec3d21233ce517c8b9be 159 Pfam PF01047 MarR family 31 89 1.3E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_04185 b58581117e9fec3d21233ce517c8b9be 159 SMART SM00347 24 124 1.1E-20 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_01750 556f1b787f41ab879d6cb04847c50b3e 475 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 16 445 1.4E-135 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 AMS64_01750 556f1b787f41ab879d6cb04847c50b3e 475 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 461 41.283 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 AMS64_20445 90e27f5724c48742e0891cbc7e39f146 420 Pfam PF02447 GntP family permease 10 414 7.9E-23 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AMS64_19305 a96abe914908cf425122742358f975c8 277 SUPERFAMILY SSF158682 42 174 8.89E-20 T 11-10-2018 IPR029024 TerB-like AMS64_19305 a96abe914908cf425122742358f975c8 277 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 276 38.817 T 11-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 AMS64_19305 a96abe914908cf425122742358f975c8 277 Pfam PF00226 DnaJ domain 211 270 6.5E-12 T 11-10-2018 IPR001623 DnaJ domain AMS64_19305 a96abe914908cf425122742358f975c8 277 Gene3D G3DSA:1.10.287.110 188 275 1.4E-16 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMS64_19305 a96abe914908cf425122742358f975c8 277 PRINTS PR00625 DnaJ domain signature 255 275 1.2E-9 T 11-10-2018 IPR001623 DnaJ domain AMS64_19305 a96abe914908cf425122742358f975c8 277 PRINTS PR00625 DnaJ domain signature 213 231 1.2E-9 T 11-10-2018 IPR001623 DnaJ domain AMS64_19305 a96abe914908cf425122742358f975c8 277 PRINTS PR00625 DnaJ domain signature 231 246 1.2E-9 T 11-10-2018 IPR001623 DnaJ domain AMS64_19305 a96abe914908cf425122742358f975c8 277 Pfam PF05099 Tellurite resistance protein TerB 41 171 3.2E-14 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal AMS64_19305 a96abe914908cf425122742358f975c8 277 Gene3D G3DSA:1.10.3680.10 39 186 2.8E-23 T 11-10-2018 IPR029024 TerB-like AMS64_19305 a96abe914908cf425122742358f975c8 277 SMART SM00271 210 275 2.4E-17 T 11-10-2018 IPR001623 DnaJ domain AMS64_19305 a96abe914908cf425122742358f975c8 277 SUPERFAMILY SSF46565 131 271 1.46E-29 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMS64_13320 60fad2ef2d5d028f88b99fe952ee7edf 651 Gene3D G3DSA:3.30.1050.10 525 651 2.9E-47 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMS64_13320 60fad2ef2d5d028f88b99fe952ee7edf 651 Gene3D G3DSA:1.25.40.880 381 521 1.0E-57 T 11-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily AMS64_13320 60fad2ef2d5d028f88b99fe952ee7edf 651 Pfam PF00753 Metallo-beta-lactamase superfamily 118 345 1.2E-29 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_13320 60fad2ef2d5d028f88b99fe952ee7edf 651 Pfam PF14863 Alkyl sulfatase dimerisation 382 520 1.6E-56 T 11-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AMS64_13320 60fad2ef2d5d028f88b99fe952ee7edf 651 SMART SM00849 122 345 9.4E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_13320 60fad2ef2d5d028f88b99fe952ee7edf 651 SUPERFAMILY SSF55718 530 651 4.0E-38 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMS64_13320 60fad2ef2d5d028f88b99fe952ee7edf 651 SUPERFAMILY SSF56281 20 522 4.9E-158 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_13320 60fad2ef2d5d028f88b99fe952ee7edf 651 Gene3D G3DSA:3.60.15.30 19 380 4.7E-165 T 11-10-2018 AMS64_13320 60fad2ef2d5d028f88b99fe952ee7edf 651 Pfam PF14864 Alkyl sulfatase C-terminal 529 651 2.3E-42 T 11-10-2018 IPR029229 Alkyl sulfatase, C-terminal AMS64_16925 ae3451e446db14b6793a373cc096a8f8 402 Pfam PF07670 Nucleoside recognition 90 185 1.5E-6 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AMS64_16925 ae3451e446db14b6793a373cc096a8f8 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.1E-26 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AMS64_16925 ae3451e446db14b6793a373cc096a8f8 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 1.7E-141 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AMS64_16925 ae3451e446db14b6793a373cc096a8f8 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 3.3E-70 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AMS64_13090 6f5041352850ec36a5b1ebd3129a1c77 421 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 26 391 5.2E-114 T 11-10-2018 IPR020010 Conserved hypothetical protein CHP03503 AMS64_14150 8b78336b5c6348d9d94f842ffbb1993d 148 Gene3D G3DSA:3.10.450.430 3 147 3.4E-40 T 11-10-2018 AMS64_14150 8b78336b5c6348d9d94f842ffbb1993d 148 Pfam PF10980 Protein of unknown function (DUF2787) 18 145 2.2E-34 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AMS64_16790 e6ffdd3bb56707739b5ce7fcf1577d9a 112 Pfam PF05666 Fels-1 Prophage Protein-like 20 56 1.3E-11 T 11-10-2018 IPR008617 Uncharacterised protein family, YcgJ AMS64_18185 0d320fa91be0844851a2280cb64d034a 359 Hamap MF_01113 DNA polymerase IV [dinB]. 9 356 35.951 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AMS64_18185 0d320fa91be0844851a2280cb64d034a 359 Gene3D G3DSA:2.30.40.20 29 81 1.2E-63 T 11-10-2018 AMS64_18185 0d320fa91be0844851a2280cb64d034a 359 Pfam PF00817 impB/mucB/samB family 15 162 5.9E-49 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMS64_18185 0d320fa91be0844851a2280cb64d034a 359 Gene3D G3DSA:3.30.1490.100 245 358 8.5E-21 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMS64_18185 0d320fa91be0844851a2280cb64d034a 359 SUPERFAMILY SSF56672 6 242 6.85E-89 T 11-10-2018 AMS64_18185 0d320fa91be0844851a2280cb64d034a 359 Gene3D G3DSA:3.30.70.270 12 172 1.2E-63 T 11-10-2018 AMS64_18185 0d320fa91be0844851a2280cb64d034a 359 Gene3D G3DSA:1.10.150.20 174 233 2.8E-16 T 11-10-2018 AMS64_18185 0d320fa91be0844851a2280cb64d034a 359 SUPERFAMILY SSF100879 249 357 2.55E-19 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMS64_18185 0d320fa91be0844851a2280cb64d034a 359 Pfam PF11798 IMS family HHH motif 174 202 2.8E-6 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AMS64_14715 baad0707364b56b16086951d5e6fa533 300 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 140 281 2.0E-46 T 11-10-2018 IPR005642 Lysine exporter LysO AMS64_14715 baad0707364b56b16086951d5e6fa533 300 Pfam PF03956 Lysine exporter LysO 113 296 5.8E-54 T 11-10-2018 IPR005642 Lysine exporter LysO AMS64_00135 a73e52a0379a1a9becf664c9491eb3a0 163 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 74 143 1.3E-18 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AMS64_00135 a73e52a0379a1a9becf664c9491eb3a0 163 SUPERFAMILY SSF54928 64 155 3.36E-26 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 AMS64_00135 a73e52a0379a1a9becf664c9491eb3a0 163 Gene3D G3DSA:3.30.70.330 56 162 7.1E-27 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMS64_00135 a73e52a0379a1a9becf664c9491eb3a0 163 SMART SM00360 73 145 2.6E-21 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AMS64_01305 dc59f176c0a1a1dbe79707e8b04826f8 179 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 3.1E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_01305 dc59f176c0a1a1dbe79707e8b04826f8 179 Gene3D G3DSA:2.160.10.10 4 179 6.5E-53 T 11-10-2018 AMS64_01305 dc59f176c0a1a1dbe79707e8b04826f8 179 SUPERFAMILY SSF51161 6 176 9.56E-44 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_10285 2905414a468a933ef4fc30e46b625574 492 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 38 476 3.3E-152 T 11-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AMS64_10285 2905414a468a933ef4fc30e46b625574 492 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 34 480 162.53 T 11-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AMS64_10285 2905414a468a933ef4fc30e46b625574 492 Gene3D G3DSA:3.40.640.10 122 380 4.1E-129 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_10285 2905414a468a933ef4fc30e46b625574 492 SUPERFAMILY SSF53383 101 478 2.72E-35 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_10285 2905414a468a933ef4fc30e46b625574 492 Pfam PF12390 Selenocysteine synthase N terminal 38 76 1.9E-8 T 11-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AMS64_10285 2905414a468a933ef4fc30e46b625574 492 Gene3D G3DSA:3.90.1150.110 40 467 4.1E-129 T 11-10-2018 AMS64_10285 2905414a468a933ef4fc30e46b625574 492 Pfam PF03841 L-seryl-tRNA selenium transferase 110 462 2.6E-94 T 11-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AMS64_02245 d78644d623093b0e8ab92fa50dbfedac 299 SUPERFAMILY SSF103481 36 140 1.57E-9 T 11-10-2018 AMS64_02245 d78644d623093b0e8ab92fa50dbfedac 299 SUPERFAMILY SSF103481 185 281 1.24E-12 T 11-10-2018 AMS64_02245 d78644d623093b0e8ab92fa50dbfedac 299 Pfam PF00892 EamA-like transporter family 4 138 1.3E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_02245 d78644d623093b0e8ab92fa50dbfedac 299 Pfam PF00892 EamA-like transporter family 147 279 1.3E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_08035 b6673ee353db1d42ada9ef5f54b4ee15 371 PIRSF PIRSF016907 1 369 3.8E-127 T 11-10-2018 IPR011386 Putative ATP-NAD kinase AMS64_08035 b6673ee353db1d42ada9ef5f54b4ee15 371 Pfam PF01513 ATP-NAD kinase 4 365 4.6E-39 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMS64_08035 b6673ee353db1d42ada9ef5f54b4ee15 371 SUPERFAMILY SSF111331 86 137 3.92E-5 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMS64_06670 8fda7fa7b2603008364d522f14ad0848 191 Pfam PF07690 Major Facilitator Superfamily 15 112 1.2E-16 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_06670 8fda7fa7b2603008364d522f14ad0848 191 SUPERFAMILY SSF103473 8 112 3.66E-19 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_06670 8fda7fa7b2603008364d522f14ad0848 191 Gene3D G3DSA:1.20.1720.10 12 115 3.2E-27 T 11-10-2018 AMS64_02160 d25ba16342d2a451e709682ea106f73e 130 Pfam PF07681 DoxX 8 87 4.5E-17 T 11-10-2018 IPR032808 DoxX family AMS64_13145 f4c20d802f8d0b23ae93532443c31062 242 SMART SM00862 164 238 6.4E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_13145 f4c20d802f8d0b23ae93532443c31062 242 Gene3D G3DSA:1.10.10.10 139 240 8.2E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_13145 f4c20d802f8d0b23ae93532443c31062 242 SUPERFAMILY SSF52172 12 140 2.99E-41 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_13145 f4c20d802f8d0b23ae93532443c31062 242 SUPERFAMILY SSF46894 138 238 3.91E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_13145 f4c20d802f8d0b23ae93532443c31062 242 SMART SM00448 14 124 1.4E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_13145 f4c20d802f8d0b23ae93532443c31062 242 Gene3D G3DSA:3.40.50.2300 3 138 9.1E-38 T 11-10-2018 AMS64_13145 f4c20d802f8d0b23ae93532443c31062 242 Pfam PF00072 Response regulator receiver domain 16 124 8.7E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_13145 f4c20d802f8d0b23ae93532443c31062 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 238 4.4E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_07115 fd9c6b19565c928c007ebc1c5727d359 231 Gene3D G3DSA:3.40.50.300 1 229 2.3E-49 T 11-10-2018 AMS64_07115 fd9c6b19565c928c007ebc1c5727d359 231 SMART SM00382 27 217 1.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_07115 fd9c6b19565c928c007ebc1c5727d359 231 SUPERFAMILY SSF52540 3 215 5.43E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07115 fd9c6b19565c928c007ebc1c5727d359 231 Pfam PF00005 ABC transporter 23 162 7.8E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_07115 fd9c6b19565c928c007ebc1c5727d359 231 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_04435 afd941b031e234cecbf7e5ebce387fc5 212 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 11-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMS64_04435 afd941b031e234cecbf7e5ebce387fc5 212 SUPERFAMILY SSF55729 12 201 8.32E-39 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_04435 afd941b031e234cecbf7e5ebce387fc5 212 Pfam PF00765 Autoinducer synthase 12 168 3.4E-30 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMS64_04435 afd941b031e234cecbf7e5ebce387fc5 212 Gene3D G3DSA:3.40.630.30 7 195 1.6E-46 T 11-10-2018 AMS64_04435 afd941b031e234cecbf7e5ebce387fc5 212 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 4.2E-28 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMS64_04435 afd941b031e234cecbf7e5ebce387fc5 212 PRINTS PR01549 Autoinducer synthesis protein signature 120 141 4.2E-28 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMS64_04435 afd941b031e234cecbf7e5ebce387fc5 212 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 4.2E-28 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMS64_04435 afd941b031e234cecbf7e5ebce387fc5 212 PRINTS PR01549 Autoinducer synthesis protein signature 142 163 4.2E-28 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMS64_04435 afd941b031e234cecbf7e5ebce387fc5 212 PRINTS PR01549 Autoinducer synthesis protein signature 95 107 4.2E-28 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMS64_04435 afd941b031e234cecbf7e5ebce387fc5 212 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 4.2E-28 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMS64_06250 e5b1322f09d3684ccf6c954ba363226f 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AMS64_06250 e5b1322f09d3684ccf6c954ba363226f 172 Gene3D G3DSA:3.40.50.360 1 171 3.0E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_06250 e5b1322f09d3684ccf6c954ba363226f 172 Pfam PF00258 Flavodoxin 5 160 6.8E-25 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMS64_06250 e5b1322f09d3684ccf6c954ba363226f 172 SUPERFAMILY SSF52218 1 168 2.0E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_06250 e5b1322f09d3684ccf6c954ba363226f 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 1.6E-69 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AMS64_06250 e5b1322f09d3684ccf6c954ba363226f 172 PIRSF PIRSF038996 1 171 5.1E-58 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AMS64_12375 24771d2426ab1b353691a128aa6d9d43 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 2.5E-38 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMS64_12375 24771d2426ab1b353691a128aa6d9d43 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 2.5E-38 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMS64_12375 24771d2426ab1b353691a128aa6d9d43 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 2.5E-38 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMS64_12375 24771d2426ab1b353691a128aa6d9d43 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 2.5E-38 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMS64_12375 24771d2426ab1b353691a128aa6d9d43 396 Gene3D G3DSA:3.40.640.10 60 300 5.2E-155 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_12375 24771d2426ab1b353691a128aa6d9d43 396 SUPERFAMILY SSF53383 1 396 2.9E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_12375 24771d2426ab1b353691a128aa6d9d43 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AMS64_12375 24771d2426ab1b353691a128aa6d9d43 396 Gene3D G3DSA:3.90.1150.10 5 392 5.2E-155 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMS64_12375 24771d2426ab1b353691a128aa6d9d43 396 Pfam PF00155 Aminotransferase class I and II 27 392 2.2E-80 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMS64_12885 3b1af0e0dc0b5179ec99e68a97cb058e 367 SUPERFAMILY SSF48452 60 156 3.25E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_12885 3b1af0e0dc0b5179ec99e68a97cb058e 367 Gene3D G3DSA:1.25.40.10 43 234 3.7E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_12885 3b1af0e0dc0b5179ec99e68a97cb058e 367 Pfam PF02698 DUF218 domain 196 311 8.3E-19 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AMS64_14270 346af5db44e2d7abc66aaa2954823cff 190 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 22 173 8.4E-44 T 11-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria AMS64_14270 346af5db44e2d7abc66aaa2954823cff 190 Gene3D G3DSA:1.20.1540.10 1 183 1.3E-11 T 11-10-2018 IPR035952 Rhomboid-like superfamily AMS64_14270 346af5db44e2d7abc66aaa2954823cff 190 Pfam PF01694 Rhomboid family 32 175 3.5E-10 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMS64_14270 346af5db44e2d7abc66aaa2954823cff 190 SUPERFAMILY SSF144091 6 174 1.7E-21 T 11-10-2018 AMS64_21400 a50e0871ab952c8f896371d6635a4e2d 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 3.8E-9 T 11-10-2018 IPR003004 GspF/PilC family AMS64_21400 a50e0871ab952c8f896371d6635a4e2d 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 3.8E-9 T 11-10-2018 IPR003004 GspF/PilC family AMS64_21400 a50e0871ab952c8f896371d6635a4e2d 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 3.8E-9 T 11-10-2018 IPR003004 GspF/PilC family AMS64_21400 a50e0871ab952c8f896371d6635a4e2d 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 3.8E-9 T 11-10-2018 IPR003004 GspF/PilC family AMS64_21400 a50e0871ab952c8f896371d6635a4e2d 406 Gene3D G3DSA:1.20.81.30 56 175 1.8E-27 T 11-10-2018 AMS64_21400 a50e0871ab952c8f896371d6635a4e2d 406 Gene3D G3DSA:1.20.81.30 256 368 1.2E-29 T 11-10-2018 AMS64_21400 a50e0871ab952c8f896371d6635a4e2d 406 Pfam PF00482 Type II secretion system (T2SS), protein F 70 193 2.6E-26 T 11-10-2018 IPR018076 Type II secretion system F domain AMS64_21400 a50e0871ab952c8f896371d6635a4e2d 406 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 4.7E-29 T 11-10-2018 IPR018076 Type II secretion system F domain AMS64_05150 a450ff6089b64b213609d73001e6b61c 345 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 332 1.6E-85 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMS64_05150 a450ff6089b64b213609d73001e6b61c 345 Gene3D G3DSA:3.20.20.70 1 345 9.4E-126 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_05150 a450ff6089b64b213609d73001e6b61c 345 SUPERFAMILY SSF51395 1 333 5.19E-109 T 11-10-2018 AMS64_10880 d135550ae18905cf85a020973b9deaad 411 Pfam PF02687 FtsX-like permease family 304 404 3.6E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMS64_10880 d135550ae18905cf85a020973b9deaad 411 Pfam PF12704 MacB-like periplasmic core domain 31 237 8.4E-17 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AMS64_10880 d135550ae18905cf85a020973b9deaad 411 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 8 411 3.7E-133 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AMS64_05560 1aa03762187ebf86c0040a0c6c79f992 434 Pfam PF01555 DNA methylase 97 382 5.6E-52 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AMS64_05560 1aa03762187ebf86c0040a0c6c79f992 434 SUPERFAMILY SSF53335 73 389 1.56E-59 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_05560 1aa03762187ebf86c0040a0c6c79f992 434 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 100 106 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMS64_05560 1aa03762187ebf86c0040a0c6c79f992 434 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 97 109 1.2E-21 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMS64_05560 1aa03762187ebf86c0040a0c6c79f992 434 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 137 156 1.2E-21 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMS64_05560 1aa03762187ebf86c0040a0c6c79f992 434 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 326 348 1.2E-21 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMS64_05560 1aa03762187ebf86c0040a0c6c79f992 434 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 349 363 1.2E-21 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMS64_03920 6e6744e14ad54ecc7800734fb2d0830f 401 Pfam PF07670 Nucleoside recognition 92 189 4.2E-6 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AMS64_03920 6e6744e14ad54ecc7800734fb2d0830f 401 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 400 2.0E-58 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AMS64_03920 6e6744e14ad54ecc7800734fb2d0830f 401 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 82 5.2E-16 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AMS64_03195 5f8b8591bab564c5bc5a4e29dbade42c 285 Pfam PF01464 Transglycosylase SLT domain 26 132 9.4E-20 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AMS64_03195 5f8b8591bab564c5bc5a4e29dbade42c 285 SUPERFAMILY SSF53955 5 152 7.87E-30 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_03195 5f8b8591bab564c5bc5a4e29dbade42c 285 Gene3D G3DSA:1.10.530.10 15 161 3.1E-25 T 11-10-2018 AMS64_11170 5d062f5def37727fc8657fb3ef653758 235 SUPERFAMILY SSF55729 5 229 6.14E-87 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_11170 5d062f5def37727fc8657fb3ef653758 235 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 206 7.6E-69 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AMS64_11170 5d062f5def37727fc8657fb3ef653758 235 Gene3D G3DSA:2.30.210.20 4 63 8.8E-26 T 11-10-2018 AMS64_11170 5d062f5def37727fc8657fb3ef653758 235 Gene3D G3DSA:3.40.630.70 64 234 9.7E-64 T 11-10-2018 AMS64_11170 5d062f5def37727fc8657fb3ef653758 235 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 235 95.104 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AMS64_11170 5d062f5def37727fc8657fb3ef653758 235 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 219 1.6E-67 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AMS64_09965 53cc3f66cf4d263de38f6384ffd72179 432 Pfam PF03222 Tryptophan/tyrosine permease family 38 395 3.3E-14 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AMS64_09965 53cc3f66cf4d263de38f6384ffd72179 432 TIGRFAM TIGR00814 stp: serine transporter 27 421 1.4E-162 T 11-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 AMS64_02115 1c67b314e294e1eecdbf61637ff2b681 650 Gene3D G3DSA:2.170.130.10 23 155 1.9E-39 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMS64_02115 1c67b314e294e1eecdbf61637ff2b681 650 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 150 9.5E-28 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMS64_02115 1c67b314e294e1eecdbf61637ff2b681 650 SUPERFAMILY SSF56935 27 650 6.87E-124 T 11-10-2018 AMS64_02115 1c67b314e294e1eecdbf61637ff2b681 650 Pfam PF00593 TonB dependent receptor 196 649 3.4E-56 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMS64_02115 1c67b314e294e1eecdbf61637ff2b681 650 Gene3D G3DSA:2.40.170.20 162 650 1.8E-138 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMS64_04170 6052059aa2c627147f7fcc5ae62689f4 445 Gene3D G3DSA:2.70.70.10 288 418 1.2E-47 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_04170 6052059aa2c627147f7fcc5ae62689f4 445 Pfam PF01551 Peptidase family M23 318 411 3.7E-31 T 11-10-2018 IPR016047 Peptidase M23 AMS64_04170 6052059aa2c627147f7fcc5ae62689f4 445 Gene3D G3DSA:3.10.450.350 184 287 3.9E-35 T 11-10-2018 AMS64_04170 6052059aa2c627147f7fcc5ae62689f4 445 SUPERFAMILY SSF51261 168 413 3.77E-71 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_04170 6052059aa2c627147f7fcc5ae62689f4 445 Pfam PF04225 Opacity-associated protein A LysM-like domain 96 176 2.0E-9 T 11-10-2018 IPR007340 Opacity-associated protein A AMS64_04170 6052059aa2c627147f7fcc5ae62689f4 445 Gene3D G3DSA:3.10.450.350 91 179 3.5E-18 T 11-10-2018 AMS64_04610 26aa61222edc92d35900b5007c3f2fa1 105 SUPERFAMILY SSF101756 31 101 1.2E-8 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AMS64_04610 26aa61222edc92d35900b5007c3f2fa1 105 Gene3D G3DSA:2.40.50.200 17 105 9.5E-6 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AMS64_14500 923cc9e5ae5aae6544d654d7b79829ab 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 41.648 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14500 923cc9e5ae5aae6544d654d7b79829ab 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 76 174 2.4E-20 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14500 923cc9e5ae5aae6544d654d7b79829ab 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14500 923cc9e5ae5aae6544d654d7b79829ab 224 SUPERFAMILY SSF56770 43 189 3.53E-62 T 11-10-2018 AMS64_14500 923cc9e5ae5aae6544d654d7b79829ab 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 182 7.9E-67 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14500 923cc9e5ae5aae6544d654d7b79829ab 224 Gene3D G3DSA:3.40.50.12280 24 192 4.5E-67 T 11-10-2018 AMS64_20600 02f8876918e1d405df7a25a2e00cb144 295 SUPERFAMILY SSF51445 37 209 1.15E-6 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_20600 02f8876918e1d405df7a25a2e00cb144 295 Gene3D G3DSA:3.20.20.80 19 225 9.4E-14 T 11-10-2018 AMS64_20600 02f8876918e1d405df7a25a2e00cb144 295 Pfam PF14488 Domain of unknown function (DUF4434) 23 188 2.6E-22 T 11-10-2018 IPR027849 Protein of unknown function DUF4434 AMS64_08890 419bd28a9531af76ed5dbc4f44b68580 239 Pfam PF04288 MukE-like family 10 234 4.3E-112 T 11-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AMS64_08890 419bd28a9531af76ed5dbc4f44b68580 239 Gene3D G3DSA:1.10.10.2250 1 78 2.1E-27 T 11-10-2018 AMS64_08890 419bd28a9531af76ed5dbc4f44b68580 239 Gene3D G3DSA:1.10.10.2260 88 194 1.8E-41 T 11-10-2018 AMS64_21490 ef2bdb5ac317e2b040a2d92854cc5fa1 219 Pfam PF00484 Carbonic anhydrase 37 188 9.1E-55 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMS64_21490 ef2bdb5ac317e2b040a2d92854cc5fa1 219 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMS64_21490 ef2bdb5ac317e2b040a2d92854cc5fa1 219 Gene3D G3DSA:3.40.1050.10 1 209 7.4E-86 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMS64_21490 ef2bdb5ac317e2b040a2d92854cc5fa1 219 SMART SM00947 30 193 2.6E-74 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMS64_21490 ef2bdb5ac317e2b040a2d92854cc5fa1 219 SUPERFAMILY SSF53056 3 204 5.36E-78 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMS64_21490 ef2bdb5ac317e2b040a2d92854cc5fa1 219 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMS64_12645 bdcb4dfed1cbd2d6793905181dba4ffd 285 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 248 283 3.3E-7 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMS64_12645 bdcb4dfed1cbd2d6793905181dba4ffd 285 SUPERFAMILY SSF57783 234 283 6.63E-6 T 11-10-2018 AMS64_12645 bdcb4dfed1cbd2d6793905181dba4ffd 285 Pfam PF08378 Nuclease-related domain 33 144 2.3E-26 T 11-10-2018 IPR011528 Nuclease-related domain, NERD AMS64_02910 a2a3b9965d0b9e3b49370b6fba04de26 364 Pfam PF03969 AFG1-like ATPase 1 360 3.2E-152 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 AMS64_02910 a2a3b9965d0b9e3b49370b6fba04de26 364 SUPERFAMILY SSF52540 59 198 2.73E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_02910 a2a3b9965d0b9e3b49370b6fba04de26 364 Gene3D G3DSA:3.40.50.300 48 204 1.9E-18 T 11-10-2018 AMS64_02910 a2a3b9965d0b9e3b49370b6fba04de26 364 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 364 53.911 T 11-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AMS64_15050 6416bbd7b203cbcc987992e6dce0d900 251 SUPERFAMILY SSF53448 1 203 1.27E-27 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_15050 6416bbd7b203cbcc987992e6dce0d900 251 Pfam PF02348 Cytidylyltransferase 4 204 3.2E-27 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AMS64_15050 6416bbd7b203cbcc987992e6dce0d900 251 Gene3D G3DSA:3.90.550.10 1 210 1.5E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_12580 e21cb90b6cdc85f420eb3a32b85bc613 407 Gene3D G3DSA:3.40.91.80 218 407 1.4E-42 T 11-10-2018 IPR038365 EcoRII, C-terminal domain superfamily AMS64_12580 e21cb90b6cdc85f420eb3a32b85bc613 407 Pfam PF09019 EcoRII C terminal 233 400 2.3E-68 T 11-10-2018 IPR015109 Restriction endonuclease, type II, EcoRII, C-terminal GO:0003677|GO:0009036|GO:0009307 AMS64_12580 e21cb90b6cdc85f420eb3a32b85bc613 407 SUPERFAMILY SSF52980 184 404 7.51E-58 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMS64_17295 cab1200247cd10a93110f725b7fe5b51 304 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 118 2.2E-18 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMS64_17295 cab1200247cd10a93110f725b7fe5b51 304 Gene3D G3DSA:3.40.50.720 1 118 3.1E-27 T 11-10-2018 AMS64_17295 cab1200247cd10a93110f725b7fe5b51 304 SUPERFAMILY SSF55347 121 260 4.25E-34 T 11-10-2018 AMS64_17295 cab1200247cd10a93110f725b7fe5b51 304 SUPERFAMILY SSF51735 1 132 4.86E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_17295 cab1200247cd10a93110f725b7fe5b51 304 Gene3D G3DSA:3.30.360.10 119 303 1.8E-45 T 11-10-2018 AMS64_21715 8596ccf4650e977624fbf8cce0389679 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 119 2.0E-44 T 11-10-2018 IPR017462 Sulphur relay, TusC/DsrF AMS64_21715 8596ccf4650e977624fbf8cce0389679 119 Pfam PF02635 DsrE/DsrF-like family 3 119 9.3E-28 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AMS64_21715 8596ccf4650e977624fbf8cce0389679 119 SUPERFAMILY SSF75169 3 119 1.7E-36 T 11-10-2018 IPR027396 DsrEFH-like AMS64_21715 8596ccf4650e977624fbf8cce0389679 119 Gene3D G3DSA:3.40.1260.10 2 119 6.8E-38 T 11-10-2018 IPR027396 DsrEFH-like AMS64_05510 cc014c67149ca12a243e32d81008f875 98 SUPERFAMILY SSF54909 1 98 8.58E-31 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMS64_05510 cc014c67149ca12a243e32d81008f875 98 Gene3D G3DSA:3.30.70.1060 1 98 2.3E-37 T 11-10-2018 AMS64_05510 cc014c67149ca12a243e32d81008f875 98 Pfam PF03795 YCII-related domain 1 95 1.0E-27 T 11-10-2018 IPR005545 YCII-related AMS64_08245 8da64af4b895de2e3dc62624626053de 134 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 90 103 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08245 8da64af4b895de2e3dc62624626053de 134 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 15 39 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08245 8da64af4b895de2e3dc62624626053de 134 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 128 1.0E-31 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08245 8da64af4b895de2e3dc62624626053de 134 SUPERFAMILY SSF81343 8 134 7.68E-36 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08245 8da64af4b895de2e3dc62624626053de 134 Gene3D G3DSA:1.20.1300.10 8 134 1.1E-45 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08245 8da64af4b895de2e3dc62624626053de 134 PIRSF PIRSF000178 3 134 6.8E-33 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_08245 8da64af4b895de2e3dc62624626053de 134 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 13 131 1.4E-41 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMS64_18220 8af3d51f1d6af7b320221adc710cb534 195 Gene3D G3DSA:2.40.100.10 17 180 3.7E-54 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AMS64_18220 8af3d51f1d6af7b320221adc710cb534 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 133 148 1.2E-11 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMS64_18220 8af3d51f1d6af7b320221adc710cb534 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 34 49 1.2E-11 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMS64_18220 8af3d51f1d6af7b320221adc710cb534 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 1.2E-11 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMS64_18220 8af3d51f1d6af7b320221adc710cb534 195 SUPERFAMILY SSF50891 18 179 6.14E-47 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AMS64_18220 8af3d51f1d6af7b320221adc710cb534 195 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 21 158 6.6E-43 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMS64_18220 8af3d51f1d6af7b320221adc710cb534 195 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 55 72 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AMS64_00665 c295b551c611a3ef80151f2bb0048606 414 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 12 397 2.5E-63 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 AMS64_00665 c295b551c611a3ef80151f2bb0048606 414 Gene3D G3DSA:1.10.4160.10 9 413 1.1E-43 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily AMS64_14355 68d37e1cd659ec64075d4ab1332e9386 340 SUPERFAMILY SSF52172 1 116 7.68E-27 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_14355 68d37e1cd659ec64075d4ab1332e9386 340 Pfam PF00072 Response regulator receiver domain 3 113 1.6E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_14355 68d37e1cd659ec64075d4ab1332e9386 340 SUPERFAMILY SSF103039 144 336 2.62E-43 T 11-10-2018 IPR028976 CheC-like superfamily AMS64_14355 68d37e1cd659ec64075d4ab1332e9386 340 Gene3D G3DSA:3.40.50.2300 1 119 1.6E-24 T 11-10-2018 AMS64_14355 68d37e1cd659ec64075d4ab1332e9386 340 Gene3D G3DSA:3.40.1550.10 144 339 3.7E-36 T 11-10-2018 IPR028976 CheC-like superfamily AMS64_14355 68d37e1cd659ec64075d4ab1332e9386 340 SMART SM00448 1 113 1.2E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_07260 22b0f7aef5583ede9fa74bda719ce3ff 285 Gene3D G3DSA:1.10.10.10 1 80 2.8E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_07260 22b0f7aef5583ede9fa74bda719ce3ff 285 Pfam PF01380 SIS domain 126 253 3.6E-25 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMS64_07260 22b0f7aef5583ede9fa74bda719ce3ff 285 SUPERFAMILY SSF53697 93 278 1.07E-40 T 11-10-2018 AMS64_07260 22b0f7aef5583ede9fa74bda719ce3ff 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 77 9.4E-30 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMS64_07260 22b0f7aef5583ede9fa74bda719ce3ff 285 SUPERFAMILY SSF46689 1 81 5.38E-22 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_07260 22b0f7aef5583ede9fa74bda719ce3ff 285 Gene3D G3DSA:3.40.50.10490 95 276 6.1E-41 T 11-10-2018 AMS64_04045 9fde17edb0ae24e8eb524e27e71fe854 180 PIRSF PIRSF000777 3 180 3.1E-5 T 11-10-2018 IPR024661 DNA-directed RNA polymerase III, subunit Rpc31 GO:0003899|GO:0006383 Reactome: R-HSA-1834949|Reactome: R-HSA-73780|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071 AMS64_01035 e64614026b6599673da8690cdc0d53b7 154 Gene3D G3DSA:2.70.40.10 6 154 6.7E-51 T 11-10-2018 IPR036157 dUTPase-like superfamily AMS64_01035 e64614026b6599673da8690cdc0d53b7 154 TIGRFAM TIGR00576 dut: dUTP diphosphatase 16 153 2.6E-46 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 AMS64_01035 e64614026b6599673da8690cdc0d53b7 154 SUPERFAMILY SSF51283 16 153 3.93E-46 T 11-10-2018 IPR036157 dUTPase-like superfamily AMS64_01035 e64614026b6599673da8690cdc0d53b7 154 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 153 29.494 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 AMS64_01035 e64614026b6599673da8690cdc0d53b7 154 Pfam PF00692 dUTPase 19 152 9.9E-32 T 11-10-2018 IPR029054 dUTPase-like AMS64_18075 0c3febdb4b034a317ed209d39b7cc60b 437 Gene3D G3DSA:2.40.170.10 24 437 1.7E-135 T 11-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 AMS64_18075 0c3febdb4b034a317ed209d39b7cc60b 437 Hamap MF_01301 Maltoporin [lamB]. 2 437 49.069 T 11-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 AMS64_18075 0c3febdb4b034a317ed209d39b7cc60b 437 Pfam PF02264 LamB porin 26 437 1.7E-122 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AMS64_18075 0c3febdb4b034a317ed209d39b7cc60b 437 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 42 432 4.0E-164 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AMS64_18075 0c3febdb4b034a317ed209d39b7cc60b 437 SUPERFAMILY SSF56935 24 437 4.03E-129 T 11-10-2018 AMS64_11260 3bcf27e77ed75effd43903320d3709a5 1165 Pfam PF06744 Type VI secretion protein IcmF C-terminal 918 1113 2.3E-55 T 11-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal AMS64_11260 3bcf27e77ed75effd43903320d3709a5 1165 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 24 1162 0.0 T 11-10-2018 IPR017731 Type VI secretion system, IcmF AMS64_11260 3bcf27e77ed75effd43903320d3709a5 1165 Pfam PF14331 ImcF-related N-terminal domain 201 454 3.2E-73 T 11-10-2018 IPR025743 ImcF-related, N-terminal domain AMS64_11260 3bcf27e77ed75effd43903320d3709a5 1165 SUPERFAMILY SSF52540 100 300 1.21E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11260 3bcf27e77ed75effd43903320d3709a5 1165 Pfam PF06761 Intracellular multiplication and human macrophage-killing 506 819 1.9E-74 T 11-10-2018 IPR009612 ImcF-related AMS64_06830 b1725decd9ad146fbdc51ff30cbc997f 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 3 122 9.9E-26 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AMS64_05180 6526266dce0fad92a78b8cedb8bc2c12 153 SUPERFAMILY SSF69635 4 143 6.8E-11 T 11-10-2018 AMS64_05180 6526266dce0fad92a78b8cedb8bc2c12 153 Gene3D G3DSA:3.30.1460.10 3 134 8.4E-8 T 11-10-2018 AMS64_05180 6526266dce0fad92a78b8cedb8bc2c12 153 Pfam PF05932 Tir chaperone protein (CesT) family 7 127 8.2E-8 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AMS64_02870 13252a92c4205098f51222a8c5b47c6d 216 Pfam PF14187 Domain of unknown function (DUF4310) 6 213 3.6E-101 T 11-10-2018 IPR025456 Protein of unknown function DUF4310 AMS64_02870 13252a92c4205098f51222a8c5b47c6d 216 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 7 215 4.0E-119 T 11-10-2018 IPR025456 Protein of unknown function DUF4310 AMS64_06820 75308b3983ddc24af3b052362f1eae1e 362 Gene3D G3DSA:1.20.58.410 6 97 7.1E-9 T 11-10-2018 AMS64_06820 75308b3983ddc24af3b052362f1eae1e 362 SUPERFAMILY SSF75620 12 355 1.83E-136 T 11-10-2018 AMS64_06820 75308b3983ddc24af3b052362f1eae1e 362 Gene3D G3DSA:3.30.160.20 212 299 4.7E-95 T 11-10-2018 AMS64_06820 75308b3983ddc24af3b052362f1eae1e 362 SMART SM00937 66 180 1.2E-66 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMS64_06820 75308b3983ddc24af3b052362f1eae1e 362 Pfam PF03462 PCRF domain 14 205 2.0E-76 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMS64_06820 75308b3983ddc24af3b052362f1eae1e 362 Gene3D G3DSA:3.30.70.1660 113 343 4.7E-95 T 11-10-2018 AMS64_06820 75308b3983ddc24af3b052362f1eae1e 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 3.7E-170 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMS64_06820 75308b3983ddc24af3b052362f1eae1e 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMS64_06820 75308b3983ddc24af3b052362f1eae1e 362 Pfam PF00472 RF-1 domain 216 323 1.4E-40 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMS64_06820 75308b3983ddc24af3b052362f1eae1e 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.478 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMS64_09695 a4bbdaf4cdb7deb235aef9468420c01f 110 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 13 104 2.8E-15 T 11-10-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein AMS64_09695 a4bbdaf4cdb7deb235aef9468420c01f 110 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 15 104 1.6E-24 T 11-10-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 Pfam PF13932 GidA associated domain 403 616 2.4E-75 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 358 379 9.8E-7 T 11-10-2018 AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 9.8E-7 T 11-10-2018 AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 Gene3D G3DSA:1.10.10.1800 459 550 1.4E-31 T 11-10-2018 AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 SUPERFAMILY SSF51905 6 261 1.74E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 Gene3D G3DSA:3.50.50.60 296 458 3.4E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 Gene3D G3DSA:3.50.50.60 1 223 6.3E-90 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.51 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 Pfam PF01134 Glucose inhibited division protein A 8 398 8.1E-166 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 2.0E-280 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 SMART SM01228 546 617 5.2E-45 T 11-10-2018 AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AMS64_00500 3888ecf55f5b2e730b1e294080048912 629 Gene3D G3DSA:1.10.150.570 570 622 3.1E-24 T 11-10-2018 AMS64_20995 24e8c552a5f4de6d2ffbcf9c9c8fc633 356 SUPERFAMILY SSF82549 11 354 8.11E-124 T 11-10-2018 AMS64_20995 24e8c552a5f4de6d2ffbcf9c9c8fc633 356 Gene3D G3DSA:3.40.50.10440 11 183 2.1E-61 T 11-10-2018 AMS64_20995 24e8c552a5f4de6d2ffbcf9c9c8fc633 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 8.3E-143 T 11-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 AMS64_20995 24e8c552a5f4de6d2ffbcf9c9c8fc633 356 Gene3D G3DSA:3.30.1180.20 184 356 1.1E-59 T 11-10-2018 AMS64_20995 24e8c552a5f4de6d2ffbcf9c9c8fc633 356 Pfam PF02733 Dak1 domain 18 351 7.6E-125 T 11-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMS64_18175 f92d432c7d69c389da5e4b4f8271b5ae 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 8.2E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_18175 f92d432c7d69c389da5e4b4f8271b5ae 306 Gene3D G3DSA:1.10.10.10 7 94 2.8E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_18175 f92d432c7d69c389da5e4b4f8271b5ae 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.7E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_18175 f92d432c7d69c389da5e4b4f8271b5ae 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.7E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_18175 f92d432c7d69c389da5e4b4f8271b5ae 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.7E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_18175 f92d432c7d69c389da5e4b4f8271b5ae 306 Pfam PF03466 LysR substrate binding domain 91 290 9.9E-36 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_18175 f92d432c7d69c389da5e4b4f8271b5ae 306 SUPERFAMILY SSF53850 93 295 5.43E-36 T 11-10-2018 AMS64_18175 f92d432c7d69c389da5e4b4f8271b5ae 306 Gene3D G3DSA:3.40.190.10 103 288 5.5E-63 T 11-10-2018 AMS64_18175 f92d432c7d69c389da5e4b4f8271b5ae 306 SUPERFAMILY SSF46785 3 85 2.16E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_18175 f92d432c7d69c389da5e4b4f8271b5ae 306 Gene3D G3DSA:3.40.190.10 163 261 5.5E-63 T 11-10-2018 AMS64_18030 918739544d24049c8b3febb4d47b4115 244 Pfam PF00696 Amino acid kinase family 11 219 1.3E-28 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMS64_18030 918739544d24049c8b3febb4d47b4115 244 SUPERFAMILY SSF53633 7 240 6.81E-72 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_18030 918739544d24049c8b3febb4d47b4115 244 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.078 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AMS64_18030 918739544d24049c8b3febb4d47b4115 244 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.1E-102 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AMS64_18030 918739544d24049c8b3febb4d47b4115 244 PIRSF PIRSF005650 4 244 7.4E-89 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AMS64_18030 918739544d24049c8b3febb4d47b4115 244 Gene3D G3DSA:3.40.1160.10 3 242 5.0E-75 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMS64_16350 63a1e569fe06992b5c733175a58c77dd 92 Gene3D G3DSA:3.30.70.100 3 86 3.9E-12 T 11-10-2018 AMS64_16350 63a1e569fe06992b5c733175a58c77dd 92 Pfam PF03992 Antibiotic biosynthesis monooxygenase 12 68 2.9E-7 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMS64_16350 63a1e569fe06992b5c733175a58c77dd 92 SUPERFAMILY SSF54909 4 77 5.85E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMS64_16695 fef970ece0859b4dab2359b4ae598d07 292 Pfam PF00483 Nucleotidyl transferase 5 241 6.2E-73 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMS64_16695 fef970ece0859b4dab2359b4ae598d07 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 289 3.6E-163 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AMS64_16695 fef970ece0859b4dab2359b4ae598d07 292 SUPERFAMILY SSF53448 4 289 5.42E-96 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_16695 fef970ece0859b4dab2359b4ae598d07 292 Gene3D G3DSA:3.90.550.10 1 292 5.4E-90 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_11740 f68127e9c0cc9cf5141da7da14b0caee 238 Gene3D G3DSA:3.30.70.2970 40 147 2.2E-44 T 11-10-2018 AMS64_11740 f68127e9c0cc9cf5141da7da14b0caee 238 Pfam PF04402 Protein of unknown function (DUF541) 29 235 7.4E-39 T 11-10-2018 IPR007497 Protein of unknown function DUF541 AMS64_11740 f68127e9c0cc9cf5141da7da14b0caee 238 Gene3D G3DSA:3.30.110.170 30 235 2.2E-44 T 11-10-2018 AMS64_10675 19ef0162decf715d3285e9079a2a1d1c 385 SUPERFAMILY SSF56645 1 240 6.81E-75 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMS64_10675 19ef0162decf715d3285e9079a2a1d1c 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 5.8E-53 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMS64_10675 19ef0162decf715d3285e9079a2a1d1c 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.2E-22 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMS64_10675 19ef0162decf715d3285e9079a2a1d1c 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMS64_10675 19ef0162decf715d3285e9079a2a1d1c 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMS64_10675 19ef0162decf715d3285e9079a2a1d1c 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 2.2E-25 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMS64_10675 19ef0162decf715d3285e9079a2a1d1c 385 Gene3D G3DSA:1.20.140.10 233 383 3.8E-58 T 11-10-2018 AMS64_10675 19ef0162decf715d3285e9079a2a1d1c 385 SUPERFAMILY SSF47203 225 379 2.58E-62 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMS64_10675 19ef0162decf715d3285e9079a2a1d1c 385 PIRSF PIRSF016578 1 193 2.2E-11 T 11-10-2018 AMS64_10675 19ef0162decf715d3285e9079a2a1d1c 385 PIRSF PIRSF016578 212 383 1.2E-14 T 11-10-2018 AMS64_10675 19ef0162decf715d3285e9079a2a1d1c 385 Gene3D G3DSA:1.10.540.10 1 117 3.4E-29 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMS64_10675 19ef0162decf715d3285e9079a2a1d1c 385 Gene3D G3DSA:2.40.110.10 121 232 1.8E-41 T 11-10-2018 AMS64_18285 6c1f2392b1beb5005c45c73d652ee771 180 Pfam PF16036 Chalcone isomerase-like 43 176 3.3E-10 T 11-10-2018 IPR016087 Chalcone isomerase GO:0016872 AMS64_07055 f89787a34f4c4609109ddbb299dcbec9 66 Pfam PF10725 Protein of unknown function (DUF2517) 2 61 6.8E-35 T 11-10-2018 IPR019663 Uncharacterised protein YbfA AMS64_20455 c6f160676c6bdaf026703acdf7be05ad 124 PIRSF PIRSF006287 1 121 2.8E-41 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 AMS64_20455 c6f160676c6bdaf026703acdf7be05ad 124 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 118 2.1E-40 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 AMS64_20455 c6f160676c6bdaf026703acdf7be05ad 124 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 118 5.0E-21 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 AMS64_20715 293f3e3b1c0898b7adfe22f8273af959 107 SUPERFAMILY SSF47598 4 104 1.2E-54 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMS64_20715 293f3e3b1c0898b7adfe22f8273af959 107 Gene3D G3DSA:1.10.140.10 3 106 2.4E-53 T 11-10-2018 IPR023453 Methionine repressor MetJ domain superfamily AMS64_20715 293f3e3b1c0898b7adfe22f8273af959 107 Pfam PF01340 Met Apo-repressor, MetJ 4 98 1.9E-56 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AMS64_20715 293f3e3b1c0898b7adfe22f8273af959 107 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 11 102 1.0E-42 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AMS64_21080 bbbc497ccfa4b5876076b1525cb2e2bc 475 Pfam PF00909 Ammonium Transporter Family 48 473 1.8E-111 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMS64_21080 bbbc497ccfa4b5876076b1525cb2e2bc 475 ProSitePatterns PS01219 Ammonium transporters signature. 221 246 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AMS64_21080 bbbc497ccfa4b5876076b1525cb2e2bc 475 TIGRFAM TIGR00836 amt: ammonium transporter 45 473 1.9E-125 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMS64_21080 bbbc497ccfa4b5876076b1525cb2e2bc 475 Gene3D G3DSA:1.10.3430.10 22 475 1.6E-129 T 11-10-2018 IPR029020 Ammonium/urea transporter AMS64_21080 bbbc497ccfa4b5876076b1525cb2e2bc 475 SUPERFAMILY SSF111352 41 454 1.7E-117 T 11-10-2018 AMS64_22430 b0a58497779ebd9c36db60ece25ba555 242 Pfam PF00117 Glutamine amidotransferase class-I 25 191 3.3E-10 T 11-10-2018 IPR017926 Glutamine amidotransferase AMS64_22430 b0a58497779ebd9c36db60ece25ba555 242 Gene3D G3DSA:3.40.50.880 29 232 4.4E-44 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_22430 b0a58497779ebd9c36db60ece25ba555 242 SUPERFAMILY SSF52317 47 202 4.13E-39 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_06655 acad5b996b3e9dd17e5bed3ce268a586 265 Gene3D G3DSA:3.10.180.50 2 240 8.4E-96 T 11-10-2018 AMS64_06655 acad5b996b3e9dd17e5bed3ce268a586 265 Pfam PF07063 Domain of unknown function (DUF1338) 134 262 5.2E-26 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 AMS64_06655 acad5b996b3e9dd17e5bed3ce268a586 265 Pfam PF07063 Domain of unknown function (DUF1338) 35 117 1.8E-21 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 AMS64_06655 acad5b996b3e9dd17e5bed3ce268a586 265 SMART SM01150 5 263 1.8E-120 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 AMS64_08005 f946f537dc05161f13f7617627e6e114 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 18 110 1.6E-31 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMS64_08005 f946f537dc05161f13f7617627e6e114 112 Gene3D G3DSA:3.30.1360.20 18 112 3.5E-31 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMS64_08005 f946f537dc05161f13f7617627e6e114 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 111 22.697 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMS64_08005 f946f537dc05161f13f7617627e6e114 112 SUPERFAMILY SSF55248 16 110 3.14E-33 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMS64_09545 830695e3ad427b3bafe92441f54dd2cc 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 27.175 T 11-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_09545 830695e3ad427b3bafe92441f54dd2cc 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 3.5E-16 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_09545 830695e3ad427b3bafe92441f54dd2cc 87 SUPERFAMILY SSF143800 1 81 5.49E-21 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_09545 830695e3ad427b3bafe92441f54dd2cc 87 Gene3D G3DSA:2.30.170.50 1 84 3.2E-22 T 11-10-2018 AMS64_09545 830695e3ad427b3bafe92441f54dd2cc 87 Pfam PF01197 Ribosomal protein L31 1 79 1.3E-24 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_09545 830695e3ad427b3bafe92441f54dd2cc 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.4E-14 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_09545 830695e3ad427b3bafe92441f54dd2cc 87 PRINTS PR01249 Ribosomal protein L31 signature 45 60 3.4E-14 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_09545 830695e3ad427b3bafe92441f54dd2cc 87 PRINTS PR01249 Ribosomal protein L31 signature 60 78 3.4E-14 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_10460 d915dafe06191828663cede9dfa4e4fd 397 SUPERFAMILY SSF53448 45 318 1.5E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_10460 d915dafe06191828663cede9dfa4e4fd 397 Pfam PF13641 Glycosyltransferase like family 2 57 273 7.2E-14 T 11-10-2018 AMS64_10460 d915dafe06191828663cede9dfa4e4fd 397 Gene3D G3DSA:3.90.550.10 47 261 2.5E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_17075 477241f3b380c235e23fdf670b581b6b 449 PIRSF PIRSF006060 1 448 2.9E-66 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_17075 477241f3b380c235e23fdf670b581b6b 449 Gene3D G3DSA:1.20.1740.10 8 441 5.3E-70 T 11-10-2018 AMS64_17075 477241f3b380c235e23fdf670b581b6b 449 Pfam PF13520 Amino acid permease 15 392 5.6E-37 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_04215 24d71768ee05d7515e76c729decee00f 367 SUPERFAMILY SSF53955 156 356 4.79E-38 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_04215 24d71768ee05d7515e76c729decee00f 367 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 214 242 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AMS64_04215 24d71768ee05d7515e76c729decee00f 367 Pfam PF11873 Domain of unknown function (DUF3393) 4 192 7.0E-66 T 11-10-2018 IPR024570 Murein transglycosylase-C, N-terminal AMS64_04215 24d71768ee05d7515e76c729decee00f 367 Gene3D G3DSA:1.10.530.10 177 356 5.0E-52 T 11-10-2018 AMS64_04215 24d71768ee05d7515e76c729decee00f 367 Pfam PF01464 Transglycosylase SLT domain 197 318 5.8E-30 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AMS64_00075 0a80b66427f91781ee050b70ffec4fbf 481 Pfam PF13520 Amino acid permease 11 439 4.2E-29 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_00075 0a80b66427f91781ee050b70ffec4fbf 481 Gene3D G3DSA:1.20.1740.10 7 467 2.5E-6 T 11-10-2018 AMS64_00075 0a80b66427f91781ee050b70ffec4fbf 481 PIRSF PIRSF006060 1 475 1.6E-50 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_21330 db424b46cc8b0b14b3c479c789f3b7ce 1297 Pfam PF13116 Protein of unknown function 495 780 3.3E-82 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 AMS64_21330 db424b46cc8b0b14b3c479c789f3b7ce 1297 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 10 1252 2.4E-252 T 11-10-2018 IPR011836 Conserved hypothetical protein CHP02099 AMS64_21330 db424b46cc8b0b14b3c479c789f3b7ce 1297 Pfam PF13502 AsmA-like C-terminal region 1007 1249 2.6E-58 T 11-10-2018 IPR032712 AsmA-like, C-terminal AMS64_07700 226a19b026599524fb0de60195d8489a 397 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 272 397 3.8E-47 T 11-10-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 AMS64_09355 dc8fda865b3011f91dd61dd0c798b07d 213 SUPERFAMILY SSF55729 54 175 7.8E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_09355 dc8fda865b3011f91dd61dd0c798b07d 213 Pfam PF00583 Acetyltransferase (GNAT) family 73 175 7.0E-6 T 11-10-2018 IPR000182 GNAT domain AMS64_09355 dc8fda865b3011f91dd61dd0c798b07d 213 Gene3D G3DSA:3.40.630.30 37 198 8.5E-27 T 11-10-2018 AMS64_09690 f570baad94abba8dc205c8bbe6eb6db2 476 SUPERFAMILY SSF52777 256 447 7.78E-6 T 11-10-2018 AMS64_09690 f570baad94abba8dc205c8bbe6eb6db2 476 SUPERFAMILY SSF52777 17 145 2.89E-13 T 11-10-2018 AMS64_09690 f570baad94abba8dc205c8bbe6eb6db2 476 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 8 455 3.4E-113 T 11-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AMS64_09690 f570baad94abba8dc205c8bbe6eb6db2 476 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 8 270 2.8E-35 T 11-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AMS64_09690 f570baad94abba8dc205c8bbe6eb6db2 476 Pfam PF06974 Protein of unknown function (DUF1298) 313 454 1.4E-38 T 11-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AMS64_09690 f570baad94abba8dc205c8bbe6eb6db2 476 Gene3D G3DSA:3.30.559.10 14 163 6.9E-8 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMS64_22300 3eb238e6dcfb00686a3b7bdf01084b20 86 SUPERFAMILY SSF160272 1 86 2.22E-28 T 11-10-2018 IPR036692 Shew3726-like superfamily AMS64_22300 3eb238e6dcfb00686a3b7bdf01084b20 86 Gene3D G3DSA:3.30.160.140 1 86 3.9E-30 T 11-10-2018 IPR036692 Shew3726-like superfamily AMS64_22300 3eb238e6dcfb00686a3b7bdf01084b20 86 Pfam PF07369 Protein of unknown function (DUF1488) 5 86 1.2E-26 T 11-10-2018 IPR009962 Protein of unknown function DUF1488 AMS64_03415 c8a267c8b8281bd2094c082db4f5d7d9 471 Gene3D G3DSA:1.20.1720.10 13 256 1.5E-50 T 11-10-2018 AMS64_03415 c8a267c8b8281bd2094c082db4f5d7d9 471 Gene3D G3DSA:1.20.1250.20 261 460 2.7E-14 T 11-10-2018 AMS64_03415 c8a267c8b8281bd2094c082db4f5d7d9 471 Pfam PF07690 Major Facilitator Superfamily 18 407 9.8E-48 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_03415 c8a267c8b8281bd2094c082db4f5d7d9 471 SUPERFAMILY SSF103473 8 460 1.2E-59 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_03415 c8a267c8b8281bd2094c082db4f5d7d9 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 1.6E-9 T 11-10-2018 AMS64_03415 c8a267c8b8281bd2094c082db4f5d7d9 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 1.6E-9 T 11-10-2018 AMS64_03415 c8a267c8b8281bd2094c082db4f5d7d9 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 1.6E-9 T 11-10-2018 AMS64_03415 c8a267c8b8281bd2094c082db4f5d7d9 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 201 219 1.6E-9 T 11-10-2018 AMS64_03415 c8a267c8b8281bd2094c082db4f5d7d9 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 398 417 1.6E-9 T 11-10-2018 AMS64_03415 c8a267c8b8281bd2094c082db4f5d7d9 471 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 414 5.9E-72 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMS64_21115 b8378d7d72cda08b4b4eeee4bb43149b 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 150 7.6E-10 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_21115 b8378d7d72cda08b4b4eeee4bb43149b 211 Gene3D G3DSA:2.160.10.10 1 211 2.8E-76 T 11-10-2018 AMS64_21115 b8378d7d72cda08b4b4eeee4bb43149b 211 SUPERFAMILY SSF51161 14 205 1.07E-48 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_21115 b8378d7d72cda08b4b4eeee4bb43149b 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMS64_16545 dfdadc28a27ccef4e87480ab3b4437a1 136 SMART SM00528 90 136 1.0E-18 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AMS64_16545 dfdadc28a27ccef4e87480ab3b4437a1 136 PIRSF PIRSF002096 1 136 1.3E-51 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AMS64_16545 dfdadc28a27ccef4e87480ab3b4437a1 136 Pfam PF00816 H-NS histone family 45 129 7.4E-17 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AMS64_16545 dfdadc28a27ccef4e87480ab3b4437a1 136 SUPERFAMILY SSF81273 2 58 1.77E-15 T 11-10-2018 AMS64_16545 dfdadc28a27ccef4e87480ab3b4437a1 136 Gene3D G3DSA:1.10.287.1050 1 83 5.5E-28 T 11-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 AMS64_16545 dfdadc28a27ccef4e87480ab3b4437a1 136 Gene3D G3DSA:4.10.430.10 94 136 7.5E-20 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 AMS64_16545 dfdadc28a27ccef4e87480ab3b4437a1 136 SUPERFAMILY SSF81273 93 136 1.41E-9 T 11-10-2018 AMS64_15405 ef8774b6c1c25cc5f743d73bd0007ace 236 Gene3D G3DSA:1.20.58.220 1 119 2.8E-41 T 11-10-2018 IPR038078 PhoU-like domain superfamily AMS64_15405 ef8774b6c1c25cc5f743d73bd0007ace 236 SUPERFAMILY SSF109755 13 228 1.15E-70 T 11-10-2018 AMS64_15405 ef8774b6c1c25cc5f743d73bd0007ace 236 Pfam PF01895 PhoU domain 28 112 9.2E-21 T 11-10-2018 IPR026022 PhoU domain AMS64_15405 ef8774b6c1c25cc5f743d73bd0007ace 236 Pfam PF01895 PhoU domain 127 212 1.4E-17 T 11-10-2018 IPR026022 PhoU domain AMS64_15405 ef8774b6c1c25cc5f743d73bd0007ace 236 PIRSF PIRSF003107 7 226 1.4E-70 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMS64_15405 ef8774b6c1c25cc5f743d73bd0007ace 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 4.5E-75 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMS64_15405 ef8774b6c1c25cc5f743d73bd0007ace 236 Gene3D G3DSA:1.20.58.220 120 233 3.4E-37 T 11-10-2018 IPR038078 PhoU-like domain superfamily AMS64_10860 b955ed24eeade44191006978dfe7241a 144 Pfam PF03733 Inner membrane component domain 79 129 1.1E-17 T 11-10-2018 IPR005185 Inner membrane component domain AMS64_10860 b955ed24eeade44191006978dfe7241a 144 Pfam PF03733 Inner membrane component domain 7 57 4.1E-14 T 11-10-2018 IPR005185 Inner membrane component domain AMS64_10860 b955ed24eeade44191006978dfe7241a 144 PIRSF PIRSF028777 4 141 3.1E-49 T 11-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 AMS64_08420 b3b5c2dcffc34430feb3ade08a6647f4 305 Pfam PF00892 EamA-like transporter family 4 134 5.3E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_08420 b3b5c2dcffc34430feb3ade08a6647f4 305 Pfam PF00892 EamA-like transporter family 149 285 1.5E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_08420 b3b5c2dcffc34430feb3ade08a6647f4 305 SUPERFAMILY SSF103481 185 288 2.09E-6 T 11-10-2018 AMS64_08420 b3b5c2dcffc34430feb3ade08a6647f4 305 SUPERFAMILY SSF103481 35 136 2.62E-12 T 11-10-2018 AMS64_16450 8f355696f8b2837d6e9efee25dadd712 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 8.4E-15 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 AMS64_13120 54eaf1d294f1b69ce71898300e5f826b 341 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 55 337 7.7E-58 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AMS64_13120 54eaf1d294f1b69ce71898300e5f826b 341 PIRSF PIRSF017020 1 341 1.2E-129 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AMS64_13120 54eaf1d294f1b69ce71898300e5f826b 341 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 6 335 7.7E-107 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AMS64_13120 54eaf1d294f1b69ce71898300e5f826b 341 SUPERFAMILY SSF53187 5 336 1.03E-82 T 11-10-2018 AMS64_13120 54eaf1d294f1b69ce71898300e5f826b 341 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 341 155.044 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AMS64_13120 54eaf1d294f1b69ce71898300e5f826b 341 Gene3D G3DSA:3.40.630.10 2 341 3.1E-115 T 11-10-2018 AMS64_19535 a48df226123ca1736e1d82a188281bf0 367 Gene3D G3DSA:3.30.470.20 129 284 6.9E-34 T 11-10-2018 AMS64_19535 a48df226123ca1736e1d82a188281bf0 367 SUPERFAMILY SSF56104 14 345 9.81E-66 T 11-10-2018 AMS64_19535 a48df226123ca1736e1d82a188281bf0 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 6.7E-204 T 11-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AMS64_19535 a48df226123ca1736e1d82a188281bf0 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 20.603 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMS64_19535 a48df226123ca1736e1d82a188281bf0 367 Gene3D G3DSA:3.30.200.20 10 128 2.1E-18 T 11-10-2018 AMS64_19535 a48df226123ca1736e1d82a188281bf0 367 Pfam PF01259 SAICAR synthetase 22 295 5.1E-46 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMS64_06195 719714d6ffcfed23b5cda0edcfb3ed15 367 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_06195 719714d6ffcfed23b5cda0edcfb3ed15 367 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 6.5E-137 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_06195 719714d6ffcfed23b5cda0edcfb3ed15 367 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 11 366 28.687 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_06195 719714d6ffcfed23b5cda0edcfb3ed15 367 Pfam PF01098 Cell cycle protein 17 364 2.2E-117 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_18395 8a8b8affb50d28927b5a55f5611cace9 329 Gene3D G3DSA:3.90.320.10 19 216 3.0E-43 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal AMS64_18395 8a8b8affb50d28927b5a55f5611cace9 329 SUPERFAMILY SSF52980 15 205 5.31E-40 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMS64_18395 8a8b8affb50d28927b5a55f5611cace9 329 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 17 171 2.2E-42 T 11-10-2018 IPR017482 Putative phage-type endonuclease AMS64_18395 8a8b8affb50d28927b5a55f5611cace9 329 Pfam PF09588 YqaJ-like viral recombinase domain 23 160 1.1E-35 T 11-10-2018 IPR019080 YqaJ viral recombinase AMS64_04790 eae2e64f26b996d8f501c663927e3694 772 PIRSF PIRSF002799 1 772 0.0 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_04790 eae2e64f26b996d8f501c663927e3694 772 Gene3D G3DSA:3.30.2060.10 69 158 4.2E-257 T 11-10-2018 AMS64_04790 eae2e64f26b996d8f501c663927e3694 772 Gene3D G3DSA:3.40.710.10 61 717 4.2E-257 T 11-10-2018 AMS64_04790 eae2e64f26b996d8f501c663927e3694 772 Pfam PF00912 Transglycosylase 167 337 2.3E-57 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_04790 eae2e64f26b996d8f501c663927e3694 772 Gene3D G3DSA:1.10.3810.10 159 362 4.2E-257 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_04790 eae2e64f26b996d8f501c663927e3694 772 SUPERFAMILY SSF56601 320 747 6.41E-112 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMS64_04790 eae2e64f26b996d8f501c663927e3694 772 SUPERFAMILY SSF53955 164 360 3.94E-68 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_04790 eae2e64f26b996d8f501c663927e3694 772 Gene3D G3DSA:1.20.5.100 11 54 3.0E-9 T 11-10-2018 AMS64_04790 eae2e64f26b996d8f501c663927e3694 772 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 26 743 2.7E-294 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_04790 eae2e64f26b996d8f501c663927e3694 772 Pfam PF00905 Penicillin binding protein transpeptidase domain 432 669 2.1E-26 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMS64_04790 eae2e64f26b996d8f501c663927e3694 772 Pfam PF14814 Bifunctional transglycosylase second domain 71 155 5.2E-26 T 11-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_16165 5d8bbf391f94033640c7278383ec972f 345 Gene3D G3DSA:1.10.287.470 96 187 3.3E-35 T 11-10-2018 AMS64_16165 5d8bbf391f94033640c7278383ec972f 345 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 289 4.5E-29 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMS64_16165 5d8bbf391f94033640c7278383ec972f 345 Gene3D G3DSA:2.40.30.170 225 297 3.3E-35 T 11-10-2018 AMS64_16165 5d8bbf391f94033640c7278383ec972f 345 Pfam PF13533 Biotin-lipoyl like 64 109 1.9E-11 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMS64_16165 5d8bbf391f94033640c7278383ec972f 345 Gene3D G3DSA:2.40.50.100 64 224 3.3E-35 T 11-10-2018 AMS64_16165 5d8bbf391f94033640c7278383ec972f 345 SUPERFAMILY SSF111369 64 232 9.29E-17 T 11-10-2018 AMS64_01545 4baad6367f433695c6ae6a2dda5396b3 281 Gene3D G3DSA:3.30.70.1070 198 281 4.9E-24 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMS64_01545 4baad6367f433695c6ae6a2dda5396b3 281 Pfam PF05036 Sporulation related domain 204 277 1.2E-13 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AMS64_01545 4baad6367f433695c6ae6a2dda5396b3 281 SUPERFAMILY SSF110997 203 278 1.7E-15 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMS64_05130 4651e57ebc2dc3d9fa5b64b19811c397 205 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 4 202 1.9E-66 T 11-10-2018 AMS64_05130 4651e57ebc2dc3d9fa5b64b19811c397 205 Gene3D G3DSA:3.40.50.150 2 204 4.6E-74 T 11-10-2018 AMS64_05130 4651e57ebc2dc3d9fa5b64b19811c397 205 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 127 142 - T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AMS64_05130 4651e57ebc2dc3d9fa5b64b19811c397 205 SUPERFAMILY SSF53335 9 202 1.7E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_05130 4651e57ebc2dc3d9fa5b64b19811c397 205 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 3 203 9.8E-77 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AMS64_05130 4651e57ebc2dc3d9fa5b64b19811c397 205 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 205 36.425 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AMS64_16670 7e240c53f2b07cb063cfe98bcaee0812 124 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 2.2E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_16670 7e240c53f2b07cb063cfe98bcaee0812 124 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 4.9E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_16670 7e240c53f2b07cb063cfe98bcaee0812 124 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_16670 7e240c53f2b07cb063cfe98bcaee0812 124 SUPERFAMILY SSF54523 6 87 3.53E-10 T 11-10-2018 AMS64_16670 7e240c53f2b07cb063cfe98bcaee0812 124 Gene3D G3DSA:3.30.700.10 6 85 2.1E-6 T 11-10-2018 AMS64_04685 cf6bc19791dd7dc433fb5fd37af40af8 302 SUPERFAMILY SSF52402 6 210 3.03E-76 T 11-10-2018 AMS64_04685 cf6bc19791dd7dc433fb5fd37af40af8 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.897 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMS64_04685 cf6bc19791dd7dc433fb5fd37af40af8 302 Gene3D G3DSA:3.40.50.620 7 212 7.1E-68 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_04685 cf6bc19791dd7dc433fb5fd37af40af8 302 PIRSF PIRSF002936 1 302 9.3E-157 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMS64_04685 cf6bc19791dd7dc433fb5fd37af40af8 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.6E-162 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMS64_04685 cf6bc19791dd7dc433fb5fd37af40af8 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 8.6E-66 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AMS64_10830 0eac22d42bebc59adf2e0339f3084916 637 Gene3D G3DSA:1.10.4030.30 244 383 2.2E-35 T 11-10-2018 AMS64_10830 0eac22d42bebc59adf2e0339f3084916 637 SUPERFAMILY SSF54534 262 366 3.4E-28 T 11-10-2018 AMS64_10830 0eac22d42bebc59adf2e0339f3084916 637 Gene3D G3DSA:3.10.50.40 270 369 2.2E-35 T 11-10-2018 AMS64_10830 0eac22d42bebc59adf2e0339f3084916 637 Pfam PF13624 SurA N-terminal domain 2 167 2.8E-51 T 11-10-2018 AMS64_10830 0eac22d42bebc59adf2e0339f3084916 637 Gene3D G3DSA:1.10.4030.30 42 195 5.0E-17 T 11-10-2018 AMS64_10830 0eac22d42bebc59adf2e0339f3084916 637 Pfam PF13616 PPIC-type PPIASE domain 268 366 2.9E-27 T 11-10-2018 AMS64_10830 0eac22d42bebc59adf2e0339f3084916 637 SUPERFAMILY SSF109998 44 248 4.71E-37 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AMS64_00270 b2a4b9cbe2681513f55d17b4d49af51b 243 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 36.089 T 11-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 AMS64_00270 b2a4b9cbe2681513f55d17b4d49af51b 243 Gene3D G3DSA:3.40.1280.10 1 202 5.4E-59 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMS64_00270 b2a4b9cbe2681513f55d17b4d49af51b 243 SUPERFAMILY SSF75217 4 173 6.41E-49 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMS64_00270 b2a4b9cbe2681513f55d17b4d49af51b 243 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 217 5.3E-20 T 11-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 AMS64_00270 b2a4b9cbe2681513f55d17b4d49af51b 243 Pfam PF00588 SpoU rRNA Methylase family 20 159 1.2E-33 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMS64_00520 caaec9008c151d4a26346e0cb90dc56a 136 Pfam PF03899 ATP synthase I chain 22 119 1.5E-13 T 11-10-2018 IPR005598 ATP synthase protein I AMS64_09375 c0140227862dc01eb2d7d132dd868d15 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AMS64_09375 c0140227862dc01eb2d7d132dd868d15 334 Gene3D G3DSA:3.40.50.2300 161 290 2.1E-91 T 11-10-2018 AMS64_09375 c0140227862dc01eb2d7d132dd868d15 334 SUPERFAMILY SSF53822 61 333 9.82E-95 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_09375 c0140227862dc01eb2d7d132dd868d15 334 Gene3D G3DSA:3.40.50.2300 69 322 2.1E-91 T 11-10-2018 AMS64_09375 c0140227862dc01eb2d7d132dd868d15 334 SMART SM00354 1 71 4.5E-36 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_09375 c0140227862dc01eb2d7d132dd868d15 334 Gene3D G3DSA:1.10.260.40 3 59 9.9E-23 T 11-10-2018 AMS64_09375 c0140227862dc01eb2d7d132dd868d15 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.8E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_09375 c0140227862dc01eb2d7d132dd868d15 334 Pfam PF13377 Periplasmic binding protein-like domain 169 330 5.4E-45 T 11-10-2018 AMS64_09375 c0140227862dc01eb2d7d132dd868d15 334 SUPERFAMILY SSF47413 1 59 7.67E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_00715 bc6f4ab307b0a20114b779e9704e8c71 338 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 3.5E-141 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMS64_00715 bc6f4ab307b0a20114b779e9704e8c71 338 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMS64_00715 bc6f4ab307b0a20114b779e9704e8c71 338 SMART SM01004 9 333 1.1E-250 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMS64_00715 bc6f4ab307b0a20114b779e9704e8c71 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 4.0E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMS64_00715 bc6f4ab307b0a20114b779e9704e8c71 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 4.0E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMS64_00715 bc6f4ab307b0a20114b779e9704e8c71 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 4.0E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMS64_00715 bc6f4ab307b0a20114b779e9704e8c71 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 4.0E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMS64_00715 bc6f4ab307b0a20114b779e9704e8c71 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 4.0E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMS64_00715 bc6f4ab307b0a20114b779e9704e8c71 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 4.0E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMS64_00715 bc6f4ab307b0a20114b779e9704e8c71 338 Gene3D G3DSA:3.20.20.70 2 337 5.5E-150 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_00715 bc6f4ab307b0a20114b779e9704e8c71 338 SUPERFAMILY SSF51569 8 335 1.01E-145 T 11-10-2018 AMS64_00715 bc6f4ab307b0a20114b779e9704e8c71 338 PIRSF PIRSF001415 2 336 2.8E-151 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMS64_06840 80b50cfcb090cf7468080a992e2a9cac 284 SUPERFAMILY SSF51569 3 278 1.28E-104 T 11-10-2018 AMS64_06840 80b50cfcb090cf7468080a992e2a9cac 284 Gene3D G3DSA:3.20.20.70 2 282 1.8E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_06840 80b50cfcb090cf7468080a992e2a9cac 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 4.3E-119 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMS64_06840 80b50cfcb090cf7468080a992e2a9cac 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.543 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMS64_06840 80b50cfcb090cf7468080a992e2a9cac 284 Pfam PF00793 DAHP synthetase I family 9 274 5.0E-69 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMS64_08770 ac2158e355a474227ef9efd7f1efb4ce 296 SUPERFAMILY SSF103481 48 149 3.92E-11 T 11-10-2018 AMS64_08770 ac2158e355a474227ef9efd7f1efb4ce 296 SUPERFAMILY SSF103481 189 287 5.62E-12 T 11-10-2018 AMS64_08770 ac2158e355a474227ef9efd7f1efb4ce 296 Pfam PF00892 EamA-like transporter family 11 146 4.1E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_08770 ac2158e355a474227ef9efd7f1efb4ce 296 Pfam PF00892 EamA-like transporter family 155 284 6.4E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_20315 52e87b769d59de733e01408ae3c6cd47 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 110 3.6E-14 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMS64_20315 52e87b769d59de733e01408ae3c6cd47 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 214 5.0E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_20315 52e87b769d59de733e01408ae3c6cd47 220 Gene3D G3DSA:1.10.3720.10 1 216 4.9E-38 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_20315 52e87b769d59de733e01408ae3c6cd47 220 SUPERFAMILY SSF161098 8 201 1.57E-27 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_08585 7d343288cd2385c8439bc5bed8ab749a 450 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 438 1.3E-157 T 11-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AMS64_08585 7d343288cd2385c8439bc5bed8ab749a 450 Pfam PF03606 C4-dicarboxylate anaerobic carrier 3 448 1.2E-120 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AMS64_07250 29dd095995066e552632c409b7b6da1d 166 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 134 2.2E-12 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMS64_07250 29dd095995066e552632c409b7b6da1d 166 SUPERFAMILY SSF55961 5 143 1.59E-20 T 11-10-2018 AMS64_07250 29dd095995066e552632c409b7b6da1d 166 Gene3D G3DSA:3.30.530.20 4 154 4.6E-19 T 11-10-2018 IPR023393 START-like domain superfamily AMS64_11770 c7e43c8ceb1d1caf5be6c586c40ac3ea 219 Gene3D G3DSA:3.10.620.30 14 206 5.4E-73 T 11-10-2018 AMS64_11770 c7e43c8ceb1d1caf5be6c586c40ac3ea 219 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 57 161 7.8E-12 T 11-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted AMS64_01960 ce77069d62f77534055295372201da5b 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site AMS64_01960 ce77069d62f77534055295372201da5b 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 5.7E-93 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01960 ce77069d62f77534055295372201da5b 210 Gene3D G3DSA:2.40.50.620 33 97 4.3E-16 T 11-10-2018 AMS64_01960 ce77069d62f77534055295372201da5b 210 Gene3D G3DSA:2.40.30.10 129 210 2.9E-19 T 11-10-2018 AMS64_01960 ce77069d62f77534055295372201da5b 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 40.974 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01960 ce77069d62f77534055295372201da5b 210 Pfam PF00297 Ribosomal protein L3 101 183 9.8E-12 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01960 ce77069d62f77534055295372201da5b 210 SUPERFAMILY SSF50447 1 209 3.27E-82 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMS64_14720 ea93a5279e208a1a9ac2473a3d26d88f 376 PIRSF PIRSF001238 1 376 2.8E-144 T 11-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 AMS64_14720 ea93a5279e208a1a9ac2473a3d26d88f 376 Gene3D G3DSA:2.30.40.10 4 374 1.9E-127 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_14720 ea93a5279e208a1a9ac2473a3d26d88f 376 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 2 373 4.6E-120 T 11-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 AMS64_14720 ea93a5279e208a1a9ac2473a3d26d88f 376 SUPERFAMILY SSF51338 1 374 2.68E-14 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_14720 ea93a5279e208a1a9ac2473a3d26d88f 376 Pfam PF01979 Amidohydrolase family 268 374 7.5E-11 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMS64_14720 ea93a5279e208a1a9ac2473a3d26d88f 376 SUPERFAMILY SSF51556 56 345 2.15E-66 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_14720 ea93a5279e208a1a9ac2473a3d26d88f 376 Gene3D G3DSA:3.20.20.140 57 341 1.9E-127 T 11-10-2018 AMS64_05305 5b8cf1ba570d4aa34da1aedce6b465ca 452 Pfam PF11884 Domain of unknown function (DUF3404) 51 249 1.4E-21 T 11-10-2018 IPR021821 Protein of unknown function DUF3404 AMS64_05305 5b8cf1ba570d4aa34da1aedce6b465ca 452 Gene3D G3DSA:1.10.287.130 238 305 2.1E-5 T 11-10-2018 AMS64_05305 5b8cf1ba570d4aa34da1aedce6b465ca 452 Gene3D G3DSA:3.30.565.10 323 446 1.5E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_05305 5b8cf1ba570d4aa34da1aedce6b465ca 452 SUPERFAMILY SSF47384 237 304 9.81E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMS64_05305 5b8cf1ba570d4aa34da1aedce6b465ca 452 SMART SM00387 348 446 8.0E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMS64_05305 5b8cf1ba570d4aa34da1aedce6b465ca 452 SUPERFAMILY SSF55874 337 446 8.89E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMS64_05610 a3feb7900c79f2151c4db61cc3882310 383 Pfam PF00589 Phage integrase family 209 361 1.8E-28 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_05610 a3feb7900c79f2151c4db61cc3882310 383 SUPERFAMILY SSF56349 105 370 1.82E-55 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_05610 a3feb7900c79f2151c4db61cc3882310 383 Gene3D G3DSA:1.10.443.10 208 375 3.4E-36 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_05610 a3feb7900c79f2151c4db61cc3882310 383 Gene3D G3DSA:1.10.150.130 94 195 1.5E-12 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_14025 f4f7716b93ca0f4b2ebdcaeb36380cd7 165 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 114 119 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AMS64_14025 f4f7716b93ca0f4b2ebdcaeb36380cd7 165 Gene3D G3DSA:3.40.140.10 41 165 4.3E-40 T 11-10-2018 AMS64_14025 f4f7716b93ca0f4b2ebdcaeb36380cd7 165 Pfam PF04002 RadC-like JAB domain 44 163 2.0E-39 T 11-10-2018 IPR025657 RadC-like JAB domain AMS64_14025 f4f7716b93ca0f4b2ebdcaeb36380cd7 165 TIGRFAM TIGR00608 radc: DNA repair protein RadC 27 165 2.2E-40 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AMS64_19290 011f8aa554cbc5183f6a1ee4dec6de88 422 Gene3D G3DSA:3.40.50.1820 18 422 2.2E-105 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_19290 011f8aa554cbc5183f6a1ee4dec6de88 422 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 7 421 1.9E-131 T 11-10-2018 IPR010520 UPF0255 family AMS64_19290 011f8aa554cbc5183f6a1ee4dec6de88 422 SUPERFAMILY SSF53474 51 420 8.29E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_03625 60ffa0d25375c88d22487c34a6310d2b 430 SUPERFAMILY SSF54631 199 333 1.11E-24 T 11-10-2018 AMS64_03625 60ffa0d25375c88d22487c34a6310d2b 430 Pfam PF00571 CBS domain 294 330 1.4E-4 T 11-10-2018 IPR000644 CBS domain AMS64_03625 60ffa0d25375c88d22487c34a6310d2b 430 SUPERFAMILY SSF56176 342 428 3.82E-21 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMS64_03625 60ffa0d25375c88d22487c34a6310d2b 430 Pfam PF01595 Domain of unknown function DUF21 4 195 9.5E-46 T 11-10-2018 IPR002550 CNNM, transmembrane domain AMS64_03625 60ffa0d25375c88d22487c34a6310d2b 430 Pfam PF03471 Transporter associated domain 346 421 4.9E-20 T 11-10-2018 IPR005170 Transporter-associated domain AMS64_03625 60ffa0d25375c88d22487c34a6310d2b 430 Gene3D G3DSA:3.30.465.10 344 425 2.8E-30 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMS64_03625 60ffa0d25375c88d22487c34a6310d2b 430 Gene3D G3DSA:3.10.580.10 192 343 1.5E-38 T 11-10-2018 AMS64_03625 60ffa0d25375c88d22487c34a6310d2b 430 SMART SM01091 344 426 1.7E-26 T 11-10-2018 IPR005170 Transporter-associated domain AMS64_06550 5768cb9eada8e48f95aabe951d07bc76 214 Gene3D G3DSA:3.40.30.10 2 212 2.2E-47 T 11-10-2018 AMS64_06550 5768cb9eada8e48f95aabe951d07bc76 214 SUPERFAMILY SSF52833 8 191 1.49E-27 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_20210 d49dff5038372ac0de8fff00e14a6b1e 100 SMART SM00418 15 93 1.6E-27 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_20210 d49dff5038372ac0de8fff00e14a6b1e 100 SUPERFAMILY SSF46785 7 96 2.47E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_20210 d49dff5038372ac0de8fff00e14a6b1e 100 Gene3D G3DSA:1.10.10.10 6 100 1.8E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_20210 d49dff5038372ac0de8fff00e14a6b1e 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 2.0E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_20210 d49dff5038372ac0de8fff00e14a6b1e 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 2.0E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_20210 d49dff5038372ac0de8fff00e14a6b1e 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 2.0E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_20210 d49dff5038372ac0de8fff00e14a6b1e 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 2.0E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_20210 d49dff5038372ac0de8fff00e14a6b1e 100 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 1.4E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_02640 7f9314698c579d5ba6784043fdbdd5b8 303 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 46 268 7.7E-60 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMS64_02640 7f9314698c579d5ba6784043fdbdd5b8 303 Gene3D G3DSA:3.40.710.10 21 302 2.8E-67 T 11-10-2018 AMS64_02640 7f9314698c579d5ba6784043fdbdd5b8 303 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 75 86 3.3E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMS64_02640 7f9314698c579d5ba6784043fdbdd5b8 303 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 3.3E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMS64_02640 7f9314698c579d5ba6784043fdbdd5b8 303 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 3.3E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMS64_02640 7f9314698c579d5ba6784043fdbdd5b8 303 SUPERFAMILY SSF56601 1 284 5.18E-59 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMS64_02875 8f415427927f12835f68888943b20b1b 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 237 7.8E-120 T 11-10-2018 IPR020042 Protein of unknown function DUF4311 AMS64_02875 8f415427927f12835f68888943b20b1b 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 1.7E-149 T 11-10-2018 IPR020042 Protein of unknown function DUF4311 AMS64_10635 994751dd083e003a5e418e79fbb1c9eb 623 Gene3D G3DSA:3.30.420.10 210 418 5.3E-30 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_10635 994751dd083e003a5e418e79fbb1c9eb 623 SUPERFAMILY SSF53098 209 354 8.09E-19 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_10635 994751dd083e003a5e418e79fbb1c9eb 623 Pfam PF00665 Integrase core domain 214 350 5.3E-14 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_10635 994751dd083e003a5e418e79fbb1c9eb 623 Pfam PF09299 Mu transposase, C-terminal 441 494 3.4E-7 T 11-10-2018 IPR015378 Transposase-like, Mu, C-terminal AMS64_08190 d7a37e274970abd5793c56ac7230b453 77 SUPERFAMILY SSF55174 5 68 9.16E-18 T 11-10-2018 AMS64_08190 d7a37e274970abd5793c56ac7230b453 77 Gene3D G3DSA:3.10.290.10 1 69 3.2E-23 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMS64_08190 d7a37e274970abd5793c56ac7230b453 77 Pfam PF13275 S4 domain 8 68 2.2E-21 T 11-10-2018 AMS64_21930 10162a6bff46fcf00e700be301c608eb 178 Pfam PF10063 Uncharacterized integral membrane protein (DUF2301) 96 175 1.9E-11 T 11-10-2018 IPR019275 Protein of unknown function DUF2301 AMS64_14160 cf3eb1f3f8a4c5e87a92f1f630e2e64a 297 Gene3D G3DSA:1.10.10.10 5 66 4.5E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_14160 cf3eb1f3f8a4c5e87a92f1f630e2e64a 297 Pfam PF13280 WYL domain 128 294 7.9E-19 T 11-10-2018 IPR026881 WYL domain AMS64_14160 cf3eb1f3f8a4c5e87a92f1f630e2e64a 297 Pfam PF08220 DeoR-like helix-turn-helix domain 14 49 9.5E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMS64_05095 0dd871fb9dd0cfef3e97c0e9e9388c60 297 Pfam PF04393 Protein of unknown function (DUF535) 25 291 3.4E-62 T 11-10-2018 IPR007488 Protein of unknown function DUF535 AMS64_16300 b8bcb8dfec25feff1375faa39b19559c 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 113 7.5E-32 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR AMS64_16300 b8bcb8dfec25feff1375faa39b19559c 116 Gene3D G3DSA:3.40.30.10 2 115 1.9E-42 T 11-10-2018 AMS64_16300 b8bcb8dfec25feff1375faa39b19559c 116 SUPERFAMILY SSF52833 3 114 1.34E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_16300 b8bcb8dfec25feff1375faa39b19559c 116 Pfam PF03960 ArsC family 6 111 7.4E-16 T 11-10-2018 IPR006660 Arsenate reductase-like AMS64_11180 f74052d9dc8b7cbec8ed43142602b3d1 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.975 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMS64_11180 f74052d9dc8b7cbec8ed43142602b3d1 72 SMART SM00316 4 72 4.6E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMS64_11180 f74052d9dc8b7cbec8ed43142602b3d1 72 SUPERFAMILY SSF50249 1 70 3.83E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_11180 f74052d9dc8b7cbec8ed43142602b3d1 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 7.2E-27 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AMS64_11180 f74052d9dc8b7cbec8ed43142602b3d1 72 Gene3D G3DSA:2.40.50.140 1 72 2.7E-35 T 11-10-2018 AMS64_11180 f74052d9dc8b7cbec8ed43142602b3d1 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.2E-37 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMS64_10070 869a0646e3855ef01a193ebdb15eb2d1 130 SUPERFAMILY SSF46955 10 124 3.59E-26 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMS64_10070 869a0646e3855ef01a193ebdb15eb2d1 130 Gene3D G3DSA:1.10.1660.10 2 128 3.3E-27 T 11-10-2018 AMS64_10070 869a0646e3855ef01a193ebdb15eb2d1 130 SMART SM00422 10 77 6.5E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_10070 869a0646e3855ef01a193ebdb15eb2d1 130 Pfam PF13411 MerR HTH family regulatory protein 10 75 1.4E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMS64_14610 f828f8b18a49a0e28030ed061cd5e3b0 1023 Gene3D G3DSA:3.30.465.40 17 206 5.0E-46 T 11-10-2018 AMS64_14610 f828f8b18a49a0e28030ed061cd5e3b0 1023 SUPERFAMILY SSF46548 519 691 3.14E-7 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMS64_14610 f828f8b18a49a0e28030ed061cd5e3b0 1023 SUPERFAMILY SSF55103 258 538 1.64E-47 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMS64_14610 f828f8b18a49a0e28030ed061cd5e3b0 1023 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 672 683 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_14610 f828f8b18a49a0e28030ed061cd5e3b0 1023 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 538 4.3E-53 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMS64_14610 f828f8b18a49a0e28030ed061cd5e3b0 1023 Pfam PF01565 FAD binding domain 52 190 7.3E-37 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMS64_14610 f828f8b18a49a0e28030ed061cd5e3b0 1023 SUPERFAMILY SSF56176 31 282 1.43E-52 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMS64_14610 f828f8b18a49a0e28030ed061cd5e3b0 1023 Pfam PF13183 4Fe-4S dicluster domain 574 686 3.6E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_17855 f6748eed41aa5abdb75fd4b7ec9cf5f9 287 SUPERFAMILY SSF52317 8 281 7.26E-51 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_17855 f6748eed41aa5abdb75fd4b7ec9cf5f9 287 PIRSF PIRSF037798 1 287 1.2E-143 T 11-10-2018 IPR017283 Protein/nucleic acid deglycase HchA GO:0036524 AMS64_17855 f6748eed41aa5abdb75fd4b7ec9cf5f9 287 Gene3D G3DSA:3.40.50.880 6 285 8.8E-80 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_17855 f6748eed41aa5abdb75fd4b7ec9cf5f9 287 Pfam PF01965 DJ-1/PfpI family 78 268 5.2E-7 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMS64_12810 bad6380f71916a03e528988398fbbb81 262 Pfam PF05618 Putative ATP-dependant zinc protease 121 256 9.3E-42 T 11-10-2018 AMS64_12810 bad6380f71916a03e528988398fbbb81 262 Gene3D G3DSA:2.40.70.10 118 246 2.8E-41 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMS64_12810 bad6380f71916a03e528988398fbbb81 262 SUPERFAMILY SSF50630 122 253 7.88E-41 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMS64_19990 d2b8876705b0534f723d9198999d0bf7 329 SUPERFAMILY SSF50129 2 156 3.96E-31 T 11-10-2018 IPR011032 GroES-like superfamily AMS64_19990 d2b8876705b0534f723d9198999d0bf7 329 Gene3D G3DSA:3.40.50.720 134 270 1.6E-89 T 11-10-2018 AMS64_19990 d2b8876705b0534f723d9198999d0bf7 329 SUPERFAMILY SSF51735 123 250 6.57E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_19990 d2b8876705b0534f723d9198999d0bf7 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 96 2.0E-8 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMS64_19990 d2b8876705b0534f723d9198999d0bf7 329 SMART SM00829 14 319 8.6E-20 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMS64_19990 d2b8876705b0534f723d9198999d0bf7 329 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 151 172 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AMS64_19990 d2b8876705b0534f723d9198999d0bf7 329 Pfam PF13602 Zinc-binding dehydrogenase 193 319 1.0E-20 T 11-10-2018 AMS64_19990 d2b8876705b0534f723d9198999d0bf7 329 Gene3D G3DSA:3.90.180.10 13 317 1.6E-89 T 11-10-2018 AMS64_16195 19a3efd000af8a98fbba808cc9d39f69 134 Gene3D G3DSA:3.10.129.10 1 134 5.0E-41 T 11-10-2018 AMS64_16195 19a3efd000af8a98fbba808cc9d39f69 134 Pfam PF03061 Thioesterase superfamily 27 98 4.7E-19 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMS64_16195 19a3efd000af8a98fbba808cc9d39f69 134 SUPERFAMILY SSF54637 8 131 3.34E-40 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_16150 d037abb36352f1e2c09e1bd3427902f1 234 Gene3D G3DSA:3.40.50.2300 1 121 9.8E-30 T 11-10-2018 AMS64_16150 d037abb36352f1e2c09e1bd3427902f1 234 Pfam PF04397 LytTr DNA-binding domain 139 231 2.4E-20 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMS64_16150 d037abb36352f1e2c09e1bd3427902f1 234 SMART SM00448 2 110 4.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_16150 d037abb36352f1e2c09e1bd3427902f1 234 Pfam PF00072 Response regulator receiver domain 5 110 1.5E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_16150 d037abb36352f1e2c09e1bd3427902f1 234 Gene3D G3DSA:2.40.50.1020 145 233 1.6E-9 T 11-10-2018 AMS64_16150 d037abb36352f1e2c09e1bd3427902f1 234 SUPERFAMILY SSF52172 1 115 4.84E-30 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_16150 d037abb36352f1e2c09e1bd3427902f1 234 SMART SM00850 138 232 4.4E-25 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMS64_00790 d8d81693a961929991cb9d9bdce17870 232 Pfam PF00970 Oxidoreductase FAD-binding domain 20 96 9.8E-5 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMS64_00790 d8d81693a961929991cb9d9bdce17870 232 SUPERFAMILY SSF63380 3 97 1.29E-19 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMS64_00790 d8d81693a961929991cb9d9bdce17870 232 Gene3D G3DSA:3.40.50.80 99 232 5.1E-26 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_00790 d8d81693a961929991cb9d9bdce17870 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 6.1E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMS64_00790 d8d81693a961929991cb9d9bdce17870 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 6.1E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMS64_00790 d8d81693a961929991cb9d9bdce17870 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 6.1E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMS64_00790 d8d81693a961929991cb9d9bdce17870 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 6.1E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMS64_00790 d8d81693a961929991cb9d9bdce17870 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 6.1E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMS64_00790 d8d81693a961929991cb9d9bdce17870 232 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 4.8E-19 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMS64_00790 d8d81693a961929991cb9d9bdce17870 232 Gene3D G3DSA:2.40.30.10 3 98 4.0E-22 T 11-10-2018 AMS64_00790 d8d81693a961929991cb9d9bdce17870 232 SUPERFAMILY SSF52343 100 230 4.32E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMS64_14225 ecbf6cf6b51b97adf870b03a9dee0055 132 SUPERFAMILY SSF46689 11 105 7.17E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_16730 669635086bd00dd903f1294f1d09e35c 393 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 1.6E-8 T 11-10-2018 AMS64_16730 669635086bd00dd903f1294f1d09e35c 393 PRINTS PR00173 Glutamate-aspartate symporter signature 331 351 1.6E-8 T 11-10-2018 AMS64_16730 669635086bd00dd903f1294f1d09e35c 393 PRINTS PR00173 Glutamate-aspartate symporter signature 39 59 1.6E-8 T 11-10-2018 AMS64_16730 669635086bd00dd903f1294f1d09e35c 393 PRINTS PR00173 Glutamate-aspartate symporter signature 266 292 1.6E-8 T 11-10-2018 AMS64_16730 669635086bd00dd903f1294f1d09e35c 393 SUPERFAMILY SSF118215 3 376 4.71E-76 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_16730 669635086bd00dd903f1294f1d09e35c 393 Gene3D G3DSA:1.10.3860.10 1 380 7.5E-46 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_16730 669635086bd00dd903f1294f1d09e35c 393 Pfam PF00375 Sodium:dicarboxylate symporter family 3 376 3.0E-76 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMS64_11665 7bd325035278711ae364387bfa170706 240 Gene3D G3DSA:1.10.8.590 172 235 2.4E-29 T 11-10-2018 AMS64_11665 7bd325035278711ae364387bfa170706 240 SUPERFAMILY SSF75217 4 165 1.57E-39 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMS64_11665 7bd325035278711ae364387bfa170706 240 Pfam PF00588 SpoU rRNA Methylase family 5 154 1.5E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMS64_11665 7bd325035278711ae364387bfa170706 240 Gene3D G3DSA:3.40.1280.10 1 164 1.5E-65 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMS64_11665 7bd325035278711ae364387bfa170706 240 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 235 3.2E-87 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AMS64_11665 7bd325035278711ae364387bfa170706 240 PIRSF PIRSF004808 1 238 4.3E-77 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AMS64_06325 48d52f88172380e5f2e54d82c150a53c 188 SUPERFAMILY SSF52499 2 186 7.85E-44 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMS64_06325 48d52f88172380e5f2e54d82c150a53c 188 Pfam PF00857 Isochorismatase family 4 184 5.4E-34 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AMS64_06325 48d52f88172380e5f2e54d82c150a53c 188 Gene3D G3DSA:3.40.50.850 1 188 2.9E-44 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMS64_22270 e12868487de919bbdec13c8574cd1aeb 457 PIRSF PIRSF000167 3 454 3.4E-168 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AMS64_22270 e12868487de919bbdec13c8574cd1aeb 457 Pfam PF04055 Radical SAM superfamily 57 228 3.6E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_22270 e12868487de919bbdec13c8574cd1aeb 457 SMART SM00729 52 272 1.7E-49 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMS64_22270 e12868487de919bbdec13c8574cd1aeb 457 Gene3D G3DSA:1.10.10.920 364 457 1.7E-34 T 11-10-2018 AMS64_22270 e12868487de919bbdec13c8574cd1aeb 457 SUPERFAMILY SSF102114 6 444 8.11E-139 T 11-10-2018 AMS64_22270 e12868487de919bbdec13c8574cd1aeb 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 1.3E-204 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AMS64_22270 e12868487de919bbdec13c8574cd1aeb 457 Pfam PF06969 HemN C-terminal domain 363 430 3.7E-9 T 11-10-2018 IPR010723 HemN, C-terminal AMS64_22270 e12868487de919bbdec13c8574cd1aeb 457 Gene3D G3DSA:3.80.30.20 1 363 1.1E-131 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMS64_17540 264918ffc798f8608868d5ac8e756484 136 Gene3D G3DSA:3.10.180.10 2 134 1.1E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_17540 264918ffc798f8608868d5ac8e756484 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 128 4.0E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMS64_17540 264918ffc798f8608868d5ac8e756484 136 SUPERFAMILY SSF54593 1 132 3.09E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_19000 13503a64d144629a8e2c92a702a90813 143 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 143 1.1E-54 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AMS64_19000 13503a64d144629a8e2c92a702a90813 143 SUPERFAMILY SSF51230 68 143 2.09E-24 T 11-10-2018 IPR011053 Single hybrid motif AMS64_19000 13503a64d144629a8e2c92a702a90813 143 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 99 116 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMS64_19000 13503a64d144629a8e2c92a702a90813 143 Gene3D G3DSA:2.40.50.100 66 143 2.8E-29 T 11-10-2018 AMS64_19000 13503a64d144629a8e2c92a702a90813 143 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 104 117 6.3E-16 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AMS64_19000 13503a64d144629a8e2c92a702a90813 143 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 72 85 6.3E-16 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AMS64_19000 13503a64d144629a8e2c92a702a90813 143 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 89 103 6.3E-16 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AMS64_19000 13503a64d144629a8e2c92a702a90813 143 Pfam PF00364 Biotin-requiring enzyme 70 142 8.3E-25 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMS64_04975 84c67cb48769c67fcf6ba0c9a79079e9 273 Gene3D G3DSA:3.40.50.1820 1 272 1.3E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_04975 84c67cb48769c67fcf6ba0c9a79079e9 273 Pfam PF12697 Alpha/beta hydrolase family 26 263 1.1E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_04975 84c67cb48769c67fcf6ba0c9a79079e9 273 SUPERFAMILY SSF53474 5 269 4.84E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_19125 360bab89fe29b901601601abce90d929 203 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 20 191 5.9E-32 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT AMS64_21000 ea842a140972cff187354e5f871e8bdf 209 Pfam PF02734 DAK2 domain 32 204 9.3E-57 T 11-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMS64_21000 ea842a140972cff187354e5f871e8bdf 209 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 8 204 2.4E-76 T 11-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 AMS64_21000 ea842a140972cff187354e5f871e8bdf 209 SUPERFAMILY SSF101473 3 205 3.4E-59 T 11-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMS64_21000 ea842a140972cff187354e5f871e8bdf 209 SMART SM01120 31 205 3.8E-82 T 11-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMS64_21000 ea842a140972cff187354e5f871e8bdf 209 Gene3D G3DSA:1.25.40.340 1 208 4.4E-74 T 11-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMS64_05425 eecadbd7d48e835c046ea696937b6200 148 Pfam PF05232 Chlorhexidine efflux transporter 2 63 4.2E-22 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter AMS64_05425 eecadbd7d48e835c046ea696937b6200 148 Pfam PF05232 Chlorhexidine efflux transporter 72 134 3.9E-25 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter AMS64_18730 60bc414cbc8fbdee15cb6e4fa0a18b80 584 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 361 502 7.6E-35 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_18730 60bc414cbc8fbdee15cb6e4fa0a18b80 584 SUPERFAMILY SSF58104 268 535 4.1E-66 T 11-10-2018 AMS64_18730 60bc414cbc8fbdee15cb6e4fa0a18b80 584 Gene3D G3DSA:1.10.287.950 247 536 1.1E-71 T 11-10-2018 AMS64_18730 60bc414cbc8fbdee15cb6e4fa0a18b80 584 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 419 2.9E-28 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_18730 60bc414cbc8fbdee15cb6e4fa0a18b80 584 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 344 2.9E-28 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_18730 60bc414cbc8fbdee15cb6e4fa0a18b80 584 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 421 450 2.9E-28 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_18730 60bc414cbc8fbdee15cb6e4fa0a18b80 584 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 70 85 2.9E-28 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMS64_18730 60bc414cbc8fbdee15cb6e4fa0a18b80 584 SMART SM00283 301 534 1.7E-69 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_18730 60bc414cbc8fbdee15cb6e4fa0a18b80 584 Gene3D G3DSA:3.30.450.20 85 204 2.2E-41 T 11-10-2018 AMS64_03860 a830408451c6844793a4a491058d95c5 919 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 785 800 1.8E-24 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AMS64_03860 a830408451c6844793a4a491058d95c5 919 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 701 715 1.8E-24 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AMS64_03860 a830408451c6844793a4a491058d95c5 919 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 719 735 1.8E-24 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AMS64_03860 a830408451c6844793a4a491058d95c5 919 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 762 780 1.8E-24 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AMS64_03860 a830408451c6844793a4a491058d95c5 919 Pfam PF01752 Collagenase 642 851 2.0E-73 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AMS64_03860 a830408451c6844793a4a491058d95c5 919 Gene3D G3DSA:1.10.1740.190 641 778 2.4E-38 T 11-10-2018 AMS64_21320 d8b5cabeb7f6894d3cfae9443799f381 277 SUPERFAMILY SSF56317 1 273 3.01E-75 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMS64_21320 d8b5cabeb7f6894d3cfae9443799f381 277 Pfam PF00795 Carbon-nitrogen hydrolase 32 265 1.4E-50 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMS64_21320 d8b5cabeb7f6894d3cfae9443799f381 277 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 159 179 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AMS64_21320 d8b5cabeb7f6894d3cfae9443799f381 277 Gene3D G3DSA:3.60.110.10 1 276 2.7E-85 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMS64_10275 c08370ef34775ef983f6f0426a1c8305 137 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 135 8.0E-32 T 11-10-2018 IPR010005 Formate hydrogenlyase maturation HycH AMS64_10275 c08370ef34775ef983f6f0426a1c8305 137 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 135 9.6E-53 T 11-10-2018 IPR010005 Formate hydrogenlyase maturation HycH AMS64_09185 ce7bccc4b1f7ce5705b40f92d9cf7663 287 Pfam PF05235 CHAD domain 18 218 2.0E-16 T 11-10-2018 IPR007899 CHAD domain AMS64_09185 ce7bccc4b1f7ce5705b40f92d9cf7663 287 SMART SM00880 12 252 8.4E-7 T 11-10-2018 IPR007899 CHAD domain AMS64_09185 ce7bccc4b1f7ce5705b40f92d9cf7663 287 Gene3D G3DSA:1.40.20.10 5 279 3.6E-14 T 11-10-2018 IPR038186 CHAD domain superfamily AMS64_07925 c9408c5cd9f3ea60b658fa6f9b8db0d1 202 Gene3D G3DSA:3.30.420.10 33 181 1.3E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_07925 c9408c5cd9f3ea60b658fa6f9b8db0d1 202 Pfam PF00665 Integrase core domain 35 149 1.2E-26 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_07925 c9408c5cd9f3ea60b658fa6f9b8db0d1 202 SUPERFAMILY SSF53098 29 194 5.56E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_11810 79cfd851ced7794bca23894157c0661d 192 Gene3D G3DSA:3.40.50.150 3 191 7.5E-46 T 11-10-2018 AMS64_11810 79cfd851ced7794bca23894157c0661d 192 SUPERFAMILY SSF53335 19 191 4.93E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_11810 79cfd851ced7794bca23894157c0661d 192 Pfam PF01596 O-methyltransferase 11 158 4.3E-21 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 AMS64_21140 571bf67debf5c32b5aa0d7c91ce76500 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.317 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AMS64_21140 571bf67debf5c32b5aa0d7c91ce76500 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 5.0E-106 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AMS64_21140 571bf67debf5c32b5aa0d7c91ce76500 255 SUPERFAMILY SSF110399 1 235 3.4E-84 T 11-10-2018 AMS64_21140 571bf67debf5c32b5aa0d7c91ce76500 255 Gene3D G3DSA:3.20.20.70 1 253 2.5E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_20285 2d1ec5abeea63042170a0d6c2b50c63d 262 Pfam PF01578 Cytochrome C assembly protein 44 260 4.6E-36 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMS64_16560 4e1fd83e12ef630bf3e9171c436795d2 377 Pfam PF13477 Glycosyl transferase 4-like 5 148 1.2E-15 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMS64_16560 4e1fd83e12ef630bf3e9171c436795d2 377 Gene3D G3DSA:3.40.50.2000 174 353 2.1E-42 T 11-10-2018 AMS64_16560 4e1fd83e12ef630bf3e9171c436795d2 377 Pfam PF00534 Glycosyl transferases group 1 188 341 8.1E-21 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMS64_16560 4e1fd83e12ef630bf3e9171c436795d2 377 Gene3D G3DSA:3.40.50.2000 25 360 2.1E-42 T 11-10-2018 AMS64_16560 4e1fd83e12ef630bf3e9171c436795d2 377 SUPERFAMILY SSF53756 17 366 3.14E-58 T 11-10-2018 AMS64_21325 c2d33baf2f1a54c92e2ae7859cbf52de 106 Pfam PF07876 Stress responsive A/B Barrel Domain 2 97 2.8E-26 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel AMS64_21325 c2d33baf2f1a54c92e2ae7859cbf52de 106 Gene3D G3DSA:3.30.70.100 1 100 5.3E-32 T 11-10-2018 AMS64_21325 c2d33baf2f1a54c92e2ae7859cbf52de 106 SUPERFAMILY SSF54909 2 99 9.91E-28 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMS64_21325 c2d33baf2f1a54c92e2ae7859cbf52de 106 SMART SM00886 2 98 1.4E-32 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel AMS64_03090 8d8fdc96bda5a585eac8b7cb1c09ee86 141 Pfam PF00460 Flagella basal body rod protein 9 32 7.8E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMS64_03090 8d8fdc96bda5a585eac8b7cb1c09ee86 141 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 137 3.2E-12 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMS64_03090 8d8fdc96bda5a585eac8b7cb1c09ee86 141 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 139 1.1E-38 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AMS64_00695 dfc7c7c89a5d160bc2623408ebec72b4 83 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 80 24.627 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMS64_00695 dfc7c7c89a5d160bc2623408ebec72b4 83 Pfam PF02416 mttA/Hcf106 family 4 56 1.2E-13 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMS64_00695 dfc7c7c89a5d160bc2623408ebec72b4 83 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 46 2.3E-20 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMS64_21890 b22faf06d369b02f6c94ff5ad66db10e 333 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 9 333 54.928 T 11-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 AMS64_21890 b22faf06d369b02f6c94ff5ad66db10e 333 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 266 6.3E-29 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AMS64_21890 b22faf06d369b02f6c94ff5ad66db10e 333 Gene3D G3DSA:3.90.420.10 66 333 4.2E-110 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMS64_21890 b22faf06d369b02f6c94ff5ad66db10e 333 SUPERFAMILY SSF56524 77 329 4.84E-90 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMS64_00770 38dcb7bd48193e59053dba9d78ed2b63 108 PIRSF PIRSF000077 2 108 1.6E-44 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMS64_00770 38dcb7bd48193e59053dba9d78ed2b63 108 SUPERFAMILY SSF52833 2 107 3.03E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_00770 38dcb7bd48193e59053dba9d78ed2b63 108 Pfam PF00085 Thioredoxin 5 105 9.1E-35 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMS64_00770 38dcb7bd48193e59053dba9d78ed2b63 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 11-10-2018 AMS64_00770 38dcb7bd48193e59053dba9d78ed2b63 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 11-10-2018 AMS64_00770 38dcb7bd48193e59053dba9d78ed2b63 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 11-10-2018 AMS64_00770 38dcb7bd48193e59053dba9d78ed2b63 108 Gene3D G3DSA:3.40.30.10 1 107 4.9E-37 T 11-10-2018 AMS64_00770 38dcb7bd48193e59053dba9d78ed2b63 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 106 1.1E-39 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMS64_00770 38dcb7bd48193e59053dba9d78ed2b63 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMS64_09770 4db0c2e5771e8b11089e88ee292322b6 329 Gene3D G3DSA:1.10.443.10 135 318 1.3E-38 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_09770 4db0c2e5771e8b11089e88ee292322b6 329 Gene3D G3DSA:1.10.150.130 8 133 2.8E-20 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_09770 4db0c2e5771e8b11089e88ee292322b6 329 Pfam PF00589 Phage integrase family 152 316 8.4E-14 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_09770 4db0c2e5771e8b11089e88ee292322b6 329 SUPERFAMILY SSF56349 134 324 2.03E-34 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_09770 4db0c2e5771e8b11089e88ee292322b6 329 SUPERFAMILY SSF47823 15 133 1.37E-22 T 11-10-2018 AMS64_08995 bb7dd279459237cf1ac4c84f45079bb9 258 Gene3D G3DSA:3.30.465.10 3 158 3.0E-25 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMS64_08995 bb7dd279459237cf1ac4c84f45079bb9 258 TIGRFAM TIGR03312 Se_sel_red_FAD: probable selenate reductase, FAD-binding subunit 2 258 1.9E-141 T 11-10-2018 IPR017698 Probable selenate reductase, FAD-binding subunit AMS64_08995 bb7dd279459237cf1ac4c84f45079bb9 258 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 156 3.3E-22 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AMS64_08995 bb7dd279459237cf1ac4c84f45079bb9 258 SMART SM01092 161 251 1.5E-7 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMS64_08995 bb7dd279459237cf1ac4c84f45079bb9 258 SUPERFAMILY SSF56176 4 156 2.73E-23 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMS64_08995 bb7dd279459237cf1ac4c84f45079bb9 258 Gene3D G3DSA:3.30.390.50 163 254 2.1E-8 T 11-10-2018 AMS64_08995 bb7dd279459237cf1ac4c84f45079bb9 258 SUPERFAMILY SSF55447 164 253 2.09E-11 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMS64_00220 a06b74506ebce48f76d350afebe303ba 299 SUPERFAMILY SSF103481 37 138 1.18E-11 T 11-10-2018 AMS64_00220 a06b74506ebce48f76d350afebe303ba 299 Pfam PF00892 EamA-like transporter family 2 134 3.7E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_00220 a06b74506ebce48f76d350afebe303ba 299 Pfam PF00892 EamA-like transporter family 147 280 1.4E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_00220 a06b74506ebce48f76d350afebe303ba 299 SUPERFAMILY SSF103481 186 287 4.45E-13 T 11-10-2018 AMS64_07350 fd6b4daad65a2a3e3fa59da4f24f3049 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 9.7E-21 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_07350 fd6b4daad65a2a3e3fa59da4f24f3049 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 9.7E-21 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_07350 fd6b4daad65a2a3e3fa59da4f24f3049 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 9.7E-21 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_07350 fd6b4daad65a2a3e3fa59da4f24f3049 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 9.7E-21 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_07350 fd6b4daad65a2a3e3fa59da4f24f3049 265 Pfam PF01311 Bacterial export proteins, family 1 13 245 3.0E-61 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_07350 fd6b4daad65a2a3e3fa59da4f24f3049 265 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 254 4.7E-68 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AMS64_03395 6dd9c1f7f4733be97a88f2665408db5c 375 Gene3D G3DSA:3.30.1220.10 246 356 3.6E-18 T 11-10-2018 IPR036627 CobW-like, C-terminal domain superfamily AMS64_03395 6dd9c1f7f4733be97a88f2665408db5c 375 SMART SM00833 261 355 5.4E-26 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMS64_03395 6dd9c1f7f4733be97a88f2665408db5c 375 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 190 8.8E-47 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMS64_03395 6dd9c1f7f4733be97a88f2665408db5c 375 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 261 354 9.2E-19 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMS64_03395 6dd9c1f7f4733be97a88f2665408db5c 375 SUPERFAMILY SSF90002 261 354 6.28E-19 T 11-10-2018 AMS64_03395 6dd9c1f7f4733be97a88f2665408db5c 375 Gene3D G3DSA:3.40.50.300 7 210 7.5E-61 T 11-10-2018 AMS64_03395 6dd9c1f7f4733be97a88f2665408db5c 375 SUPERFAMILY SSF52540 8 201 4.07E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08120 5389067f7a2d2bc62761d6241baef46b 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 12 404 6.0E-151 T 11-10-2018 IPR003776 YcaO-like domain AMS64_08120 5389067f7a2d2bc62761d6241baef46b 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 60 391 2.5E-75 T 11-10-2018 IPR003776 YcaO-like domain AMS64_05755 c19657b5e0d2246caeb10190d7505001 289 SUPERFAMILY SSF48452 77 248 1.1E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_05755 c19657b5e0d2246caeb10190d7505001 289 Pfam PF13181 Tetratricopeptide repeat 158 186 0.011 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMS64_05755 c19657b5e0d2246caeb10190d7505001 289 Gene3D G3DSA:1.25.40.10 35 289 3.2E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_19275 f5d23c2df6bd90a0d5284348ae956308 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 416 39.932 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMS64_19275 f5d23c2df6bd90a0d5284348ae956308 417 SUPERFAMILY SSF53720 4 409 5.89E-109 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMS64_19275 f5d23c2df6bd90a0d5284348ae956308 417 Gene3D G3DSA:3.40.309.10 223 374 2.0E-151 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMS64_19275 f5d23c2df6bd90a0d5284348ae956308 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMS64_19275 f5d23c2df6bd90a0d5284348ae956308 417 Pfam PF00171 Aldehyde dehydrogenase family 4 283 2.3E-15 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMS64_19275 f5d23c2df6bd90a0d5284348ae956308 417 PIRSF PIRSF000151 1 417 9.8E-165 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AMS64_19275 f5d23c2df6bd90a0d5284348ae956308 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 406 1.5E-166 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMS64_19275 f5d23c2df6bd90a0d5284348ae956308 417 Gene3D G3DSA:3.40.605.10 10 409 2.0E-151 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMS64_21145 f248b5bb2e56cd6349177d9c0af6b71e 68 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 68 3.0E-20 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis AMS64_21145 f248b5bb2e56cd6349177d9c0af6b71e 68 Gene3D G3DSA:3.10.20.30 3 68 3.4E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMS64_21145 f248b5bb2e56cd6349177d9c0af6b71e 68 Pfam PF02597 ThiS family 5 68 2.2E-15 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AMS64_21145 f248b5bb2e56cd6349177d9c0af6b71e 68 SUPERFAMILY SSF54285 3 68 1.74E-17 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMS64_12530 7f606a35f501fbca66f006cdaa6997a8 212 SUPERFAMILY SSF158682 61 206 1.18E-20 T 11-10-2018 IPR029024 TerB-like AMS64_12530 7f606a35f501fbca66f006cdaa6997a8 212 Pfam PF04391 Protein of unknown function (DUF533) 27 205 6.7E-62 T 11-10-2018 IPR007486 Inner membrane protein YebE AMS64_02040 e5dd3bc0bb48c86be5ca1dce5f282660 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.187 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_02040 e5dd3bc0bb48c86be5ca1dce5f282660 117 SUPERFAMILY SSF53137 3 115 5.45E-50 T 11-10-2018 AMS64_02040 e5dd3bc0bb48c86be5ca1dce5f282660 117 Gene3D G3DSA:3.30.420.100 1 117 8.0E-43 T 11-10-2018 AMS64_02040 e5dd3bc0bb48c86be5ca1dce5f282660 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 5.9E-42 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02040 e5dd3bc0bb48c86be5ca1dce5f282660 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.2E-44 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_07610 35439e97a9b28c2271dea6886cef1289 101 SUPERFAMILY SSF52794 2 96 4.53E-34 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AMS64_07610 35439e97a9b28c2271dea6886cef1289 101 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 85 2.4E-33 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AMS64_07610 35439e97a9b28c2271dea6886cef1289 101 Gene3D G3DSA:3.40.50.2300 1 99 1.3E-38 T 11-10-2018 AMS64_07610 35439e97a9b28c2271dea6886cef1289 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 1.7E-19 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMS64_22010 70dcc6be315360a9f816d05512308bbb 227 SMART SM00530 6 61 4.1E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_22010 70dcc6be315360a9f816d05512308bbb 227 SUPERFAMILY SSF47413 1 67 1.03E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_22010 70dcc6be315360a9f816d05512308bbb 227 Pfam PF01381 Helix-turn-helix 7 61 1.2E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_22010 70dcc6be315360a9f816d05512308bbb 227 Pfam PF00717 Peptidase S24-like 136 205 2.7E-12 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMS64_22010 70dcc6be315360a9f816d05512308bbb 227 Gene3D G3DSA:2.10.109.10 88 223 1.8E-35 T 11-10-2018 AMS64_22010 70dcc6be315360a9f816d05512308bbb 227 SUPERFAMILY SSF51306 91 218 6.15E-22 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMS64_22010 70dcc6be315360a9f816d05512308bbb 227 Gene3D G3DSA:1.10.260.40 1 65 2.2E-22 T 11-10-2018 AMS64_09235 4531618f1a364d7828e6d970e09130c3 164 SUPERFAMILY SSF52728 1 162 2.09E-37 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 AMS64_09235 4531618f1a364d7828e6d970e09130c3 164 Gene3D G3DSA:3.40.35.10 1 164 6.6E-41 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 AMS64_09235 4531618f1a364d7828e6d970e09130c3 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 151 7.0E-38 T 11-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AMS64_04370 7dfd30defab307aa608faa03792a7415 210 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 2 210 2.6E-54 T 11-10-2018 IPR026387 Outer membrane protein AMS64_16325 4a05b759affc7e37589eff672cec5ade 402 Pfam PF00999 Sodium/hydrogen exchanger family 12 397 4.0E-40 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMS64_16325 4a05b759affc7e37589eff672cec5ade 402 Gene3D G3DSA:1.20.1530.20 4 400 4.9E-14 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMS64_11825 4a27625a441cfcad82f03ce0fdd17aa7 79 Pfam PF09012 FeoC like transcriptional regulator 2 67 2.8E-23 T 11-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC AMS64_11825 4a27625a441cfcad82f03ce0fdd17aa7 79 SUPERFAMILY SSF46785 1 70 2.16E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_09620 c4b526ab8143f95eb633ab31919ae315 467 Pfam PF05155 Phage X family 322 411 1.7E-27 T 11-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 AMS64_09620 c4b526ab8143f95eb633ab31919ae315 467 Pfam PF05144 Phage replication protein CRI 2 277 1.3E-74 T 11-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 AMS64_09620 c4b526ab8143f95eb633ab31919ae315 467 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 2 412 3.2E-126 T 11-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 AMS64_18280 0ff87155334e0609c25de8925573aa7c 179 Pfam PF12915 Protein of unknown function (DUF3833) 16 177 7.6E-62 T 11-10-2018 IPR024409 Protein of unknown function DUF3833 AMS64_15155 e9c2bc9b600a1d3b687f09a7569fe49d 254 ProSitePatterns PS01087 Radical activating enzymes signature. 25 46 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AMS64_15155 e9c2bc9b600a1d3b687f09a7569fe49d 254 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 13 246 9.0E-105 T 11-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 AMS64_15155 e9c2bc9b600a1d3b687f09a7569fe49d 254 Gene3D G3DSA:3.20.20.70 9 254 7.2E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_15155 e9c2bc9b600a1d3b687f09a7569fe49d 254 PIRSF PIRSF000371 51 252 4.4E-44 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AMS64_15155 e9c2bc9b600a1d3b687f09a7569fe49d 254 PIRSF PIRSF000371 4 54 1.9E-11 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AMS64_15155 e9c2bc9b600a1d3b687f09a7569fe49d 254 Pfam PF13353 4Fe-4S single cluster domain 23 148 4.1E-21 T 11-10-2018 AMS64_15155 e9c2bc9b600a1d3b687f09a7569fe49d 254 Pfam PF04055 Radical SAM superfamily 31 185 2.8E-26 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_15155 e9c2bc9b600a1d3b687f09a7569fe49d 254 SUPERFAMILY SSF102114 30 226 2.75E-24 T 11-10-2018 AMS64_22510 e1b8269958a1057e1dfe9d46d028ab72 801 Pfam PF00580 UvrD/REP helicase N-terminal domain 113 591 2.4E-24 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMS64_22510 e1b8269958a1057e1dfe9d46d028ab72 801 Gene3D G3DSA:3.40.50.300 607 799 8.3E-10 T 11-10-2018 AMS64_22510 e1b8269958a1057e1dfe9d46d028ab72 801 Gene3D G3DSA:3.40.50.300 447 593 4.9E-15 T 11-10-2018 AMS64_22510 e1b8269958a1057e1dfe9d46d028ab72 801 SUPERFAMILY SSF52540 109 794 3.64E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_22510 e1b8269958a1057e1dfe9d46d028ab72 801 Gene3D G3DSA:3.40.50.300 103 263 4.1E-17 T 11-10-2018 AMS64_17635 bf1dd687a8329deb3590542ec32cdd51 389 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 254 379 6.9E-48 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AMS64_17635 bf1dd687a8329deb3590542ec32cdd51 389 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 254 343 1.0E-24 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AMS64_17635 bf1dd687a8329deb3590542ec32cdd51 389 SUPERFAMILY SSF64383 252 386 1.44E-45 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AMS64_17635 bf1dd687a8329deb3590542ec32cdd51 389 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 186 381 8.8E-47 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 AMS64_17635 bf1dd687a8329deb3590542ec32cdd51 389 SMART SM00771 251 381 5.4E-52 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AMS64_17635 bf1dd687a8329deb3590542ec32cdd51 389 Gene3D G3DSA:3.30.1400.10 250 388 6.0E-49 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AMS64_17635 bf1dd687a8329deb3590542ec32cdd51 389 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 383 22.198 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 AMS64_07125 19384611dc592020104a492020659dd5 280 Gene3D G3DSA:3.40.190.10 114 226 2.3E-91 T 11-10-2018 AMS64_07125 19384611dc592020104a492020659dd5 280 Gene3D G3DSA:3.40.190.10 39 263 2.3E-91 T 11-10-2018 AMS64_07125 19384611dc592020104a492020659dd5 280 Pfam PF12849 PBP superfamily domain 38 256 5.3E-29 T 11-10-2018 IPR024370 PBP domain AMS64_07125 19384611dc592020104a492020659dd5 280 SUPERFAMILY SSF53850 38 265 1.4E-30 T 11-10-2018 AMS64_21885 c7689714dfb31afd182abac9048b7a93 208 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 5 202 20.203 T 11-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 AMS64_21885 c7689714dfb31afd182abac9048b7a93 208 Pfam PF01794 Ferric reductase like transmembrane component 53 161 2.0E-16 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain AMS64_17995 b4408c984aef6ff13cf171c3c2ec0c05 170 Pfam PF03938 Outer membrane protein (OmpH-like) 13 165 1.3E-33 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AMS64_17995 b4408c984aef6ff13cf171c3c2ec0c05 170 PIRSF PIRSF002094 1 170 3.2E-46 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AMS64_17995 b4408c984aef6ff13cf171c3c2ec0c05 170 SMART SM00935 13 167 2.4E-52 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AMS64_17995 b4408c984aef6ff13cf171c3c2ec0c05 170 Gene3D G3DSA:3.30.910.20 24 167 6.8E-43 T 11-10-2018 IPR024930 Skp domain superfamily AMS64_17995 b4408c984aef6ff13cf171c3c2ec0c05 170 SUPERFAMILY SSF111384 24 166 3.92E-37 T 11-10-2018 AMS64_14625 4d2996aaa8c6e80020418fc0952332ca 373 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 342 1.0E-85 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMS64_14625 4d2996aaa8c6e80020418fc0952332ca 373 Gene3D G3DSA:3.20.20.70 3 366 2.1E-136 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_14625 4d2996aaa8c6e80020418fc0952332ca 373 SUPERFAMILY SSF51395 1 365 2.26E-121 T 11-10-2018 AMS64_06615 1faf9c3aee48363256acf04aa22a1890 224 Gene3D G3DSA:3.20.20.70 5 221 6.1E-83 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_06615 1faf9c3aee48363256acf04aa22a1890 224 SUPERFAMILY SSF51366 4 218 8.9E-75 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMS64_06615 1faf9c3aee48363256acf04aa22a1890 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMS64_06615 1faf9c3aee48363256acf04aa22a1890 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 8.5E-91 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMS64_06615 1faf9c3aee48363256acf04aa22a1890 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMS64_06615 1faf9c3aee48363256acf04aa22a1890 224 PIRSF PIRSF001461 1 224 1.0E-105 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMS64_06615 1faf9c3aee48363256acf04aa22a1890 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.9E-98 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMS64_16975 7b45a432bbebe21b6f0e60500b28f91d 239 SUPERFAMILY SSF52172 2 123 1.42E-35 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_16975 7b45a432bbebe21b6f0e60500b28f91d 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 232 4.7E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_16975 7b45a432bbebe21b6f0e60500b28f91d 239 Gene3D G3DSA:1.10.10.10 124 236 4.8E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_16975 7b45a432bbebe21b6f0e60500b28f91d 239 SMART SM00862 156 232 1.0E-13 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMS64_16975 7b45a432bbebe21b6f0e60500b28f91d 239 SMART SM00448 4 114 1.1E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_16975 7b45a432bbebe21b6f0e60500b28f91d 239 SUPERFAMILY SSF46894 138 233 2.38E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMS64_16975 7b45a432bbebe21b6f0e60500b28f91d 239 Gene3D G3DSA:3.40.50.2300 1 123 7.6E-33 T 11-10-2018 AMS64_16975 7b45a432bbebe21b6f0e60500b28f91d 239 Pfam PF00072 Response regulator receiver domain 6 113 8.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_01780 1b6542cd077c0377f3db66f4dc98c168 71 Gene3D G3DSA:2.30.170.50 1 70 7.9E-32 T 11-10-2018 AMS64_01780 1b6542cd077c0377f3db66f4dc98c168 71 Pfam PF01197 Ribosomal protein L31 1 65 1.4E-29 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01780 1b6542cd077c0377f3db66f4dc98c168 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01780 1b6542cd077c0377f3db66f4dc98c168 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 4.4E-33 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01780 1b6542cd077c0377f3db66f4dc98c168 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 9.4E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01780 1b6542cd077c0377f3db66f4dc98c168 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 9.4E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01780 1b6542cd077c0377f3db66f4dc98c168 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 9.4E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01780 1b6542cd077c0377f3db66f4dc98c168 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.056 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_01780 1b6542cd077c0377f3db66f4dc98c168 71 SUPERFAMILY SSF143800 1 67 7.46E-28 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_12675 df04c1efb08594780b2f63995ee70a8d 444 Pfam PF03553 Na+/H+ antiporter family 23 217 1.4E-15 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AMS64_15225 eac4606f4ebf32d49b5f6aba7be72f17 669 Pfam PF00672 HAMP domain 340 382 7.5E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_15225 eac4606f4ebf32d49b5f6aba7be72f17 669 SMART SM00283 406 666 9.6E-70 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_15225 eac4606f4ebf32d49b5f6aba7be72f17 669 Gene3D G3DSA:1.10.287.950 339 668 6.8E-72 T 11-10-2018 AMS64_15225 eac4606f4ebf32d49b5f6aba7be72f17 669 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 456 633 2.3E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_15225 eac4606f4ebf32d49b5f6aba7be72f17 669 SUPERFAMILY SSF58104 359 667 2.62E-72 T 11-10-2018 AMS64_15225 eac4606f4ebf32d49b5f6aba7be72f17 669 SMART SM00304 339 391 2.0E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_09420 5185c2cbd44b75720ef0373b4c9e24b8 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 250 1.3E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_09420 5185c2cbd44b75720ef0373b4c9e24b8 256 SUPERFAMILY SSF161098 3 254 4.97E-54 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_09420 5185c2cbd44b75720ef0373b4c9e24b8 256 Gene3D G3DSA:1.10.3720.10 1 256 1.1E-47 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_12850 270f38987a43fb40079b2cd8820fece2 443 Gene3D G3DSA:3.40.50.1100 116 238 3.7E-193 T 11-10-2018 AMS64_12850 270f38987a43fb40079b2cd8820fece2 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMS64_12850 270f38987a43fb40079b2cd8820fece2 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 397 1.8E-61 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMS64_12850 270f38987a43fb40079b2cd8820fece2 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 11 438 1.5E-220 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AMS64_12850 270f38987a43fb40079b2cd8820fece2 443 SUPERFAMILY SSF53686 93 438 6.58E-52 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMS64_12850 270f38987a43fb40079b2cd8820fece2 443 Gene3D G3DSA:3.40.50.1100 24 438 3.7E-193 T 11-10-2018 AMS64_12850 270f38987a43fb40079b2cd8820fece2 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 271.542 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AMS64_04325 0010dd7cbbac7e46210739c1a0793a30 328 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 86 104 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMS64_04325 0010dd7cbbac7e46210739c1a0793a30 328 Gene3D G3DSA:3.20.20.70 2 243 7.0E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_04325 0010dd7cbbac7e46210739c1a0793a30 328 PIRSF PIRSF006621 1 322 2.2E-76 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMS64_04325 0010dd7cbbac7e46210739c1a0793a30 328 SUPERFAMILY SSF51395 5 299 7.73E-80 T 11-10-2018 AMS64_04325 0010dd7cbbac7e46210739c1a0793a30 328 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 320 52.652 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AMS64_04325 0010dd7cbbac7e46210739c1a0793a30 328 Gene3D G3DSA:1.20.120.1460 246 320 9.2E-24 T 11-10-2018 AMS64_04325 0010dd7cbbac7e46210739c1a0793a30 328 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 5 319 7.7E-159 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AMS64_04325 0010dd7cbbac7e46210739c1a0793a30 328 Pfam PF01207 Dihydrouridine synthase (Dus) 8 308 2.9E-92 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMS64_17595 29e805873398b89dcfd23a0004f143db 330 Pfam PF11168 Protein of unknown function (DUF2955) 3 142 6.1E-52 T 11-10-2018 IPR022604 Protein of unknown function DUF2955 AMS64_17595 29e805873398b89dcfd23a0004f143db 330 Pfam PF13515 Fusaric acid resistance protein-like 179 311 3.3E-7 T 11-10-2018 AMS64_17595 29e805873398b89dcfd23a0004f143db 330 PIRSF PIRSF029594 1 330 2.3E-143 T 11-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 AMS64_19905 cd883d848ef4e10d74921bc40566f0ec 184 SUPERFAMILY SSF55729 7 175 2.16E-45 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_19905 cd883d848ef4e10d74921bc40566f0ec 184 Pfam PF13302 Acetyltransferase (GNAT) domain 15 150 2.8E-22 T 11-10-2018 IPR000182 GNAT domain AMS64_19905 cd883d848ef4e10d74921bc40566f0ec 184 Gene3D G3DSA:3.40.630.30 3 177 7.3E-49 T 11-10-2018 AMS64_11435 d71f8afba815e8d0628f27a71c813202 158 SUPERFAMILY SSF55729 7 152 3.9E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_11435 d71f8afba815e8d0628f27a71c813202 158 Gene3D G3DSA:3.40.630.30 5 156 1.0E-31 T 11-10-2018 AMS64_11435 d71f8afba815e8d0628f27a71c813202 158 Pfam PF13673 Acetyltransferase (GNAT) domain 34 149 1.0E-15 T 11-10-2018 IPR000182 GNAT domain AMS64_20560 6ea391e0e7e746ebfe78c8cc426fb70e 159 Pfam PF03734 L,D-transpeptidase catalytic domain 25 157 3.4E-20 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMS64_20560 6ea391e0e7e746ebfe78c8cc426fb70e 159 SUPERFAMILY SSF141523 24 157 2.09E-23 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMS64_20560 6ea391e0e7e746ebfe78c8cc426fb70e 159 Gene3D G3DSA:2.40.440.10 12 159 6.9E-18 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMS64_10735 3cca451f60af1c97e72deb3955309447 145 Pfam PF00583 Acetyltransferase (GNAT) family 42 129 3.3E-9 T 11-10-2018 IPR000182 GNAT domain AMS64_10735 3cca451f60af1c97e72deb3955309447 145 Gene3D G3DSA:3.40.630.30 4 142 4.9E-23 T 11-10-2018 AMS64_10735 3cca451f60af1c97e72deb3955309447 145 SUPERFAMILY SSF55729 4 138 4.9E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_15835 ba9d04976b555b038e5784eea6b2cb1c 180 SUPERFAMILY SSF56300 1 161 6.69E-36 T 11-10-2018 AMS64_15835 ba9d04976b555b038e5784eea6b2cb1c 180 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 166 2.8E-24 T 11-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 AMS64_15835 ba9d04976b555b038e5784eea6b2cb1c 180 Gene3D G3DSA:3.60.21.10 1 180 1.2E-60 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMS64_15835 ba9d04976b555b038e5784eea6b2cb1c 180 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 160 2.5E-23 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AMS64_17500 2ccf7499feeb6cb6cf3217e2c4f4c5d8 203 SUPERFAMILY SSF54534 6 202 1.67E-55 T 11-10-2018 AMS64_17500 2ccf7499feeb6cb6cf3217e2c4f4c5d8 203 Gene3D G3DSA:3.10.50.40 66 203 9.0E-49 T 11-10-2018 AMS64_17500 2ccf7499feeb6cb6cf3217e2c4f4c5d8 203 Gene3D G3DSA:1.10.287.460 3 65 3.6E-17 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AMS64_17500 2ccf7499feeb6cb6cf3217e2c4f4c5d8 203 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 5 106 3.5E-25 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AMS64_17500 2ccf7499feeb6cb6cf3217e2c4f4c5d8 203 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 115 200 9.8E-24 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMS64_06545 8a3c28beda2bda0d4d1ea79431551217 286 Gene3D G3DSA:3.60.15.10 25 256 2.3E-21 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_06545 8a3c28beda2bda0d4d1ea79431551217 286 SUPERFAMILY SSF56281 24 245 1.89E-33 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_06545 8a3c28beda2bda0d4d1ea79431551217 286 SMART SM00849 39 221 1.0E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMS64_11345 429e6eac8ab67eae06a8a0247eafb607 241 Pfam PF00665 Integrase core domain 84 197 2.0E-23 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMS64_11345 429e6eac8ab67eae06a8a0247eafb607 241 Gene3D G3DSA:3.30.420.10 80 238 1.3E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_11345 429e6eac8ab67eae06a8a0247eafb607 241 SUPERFAMILY SSF53098 81 236 5.16E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_07605 c0883f972b2e4c4b792b3ce707ae1640 255 PIRSF PIRSF029195 1 254 7.8E-27 T 11-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 AMS64_07605 c0883f972b2e4c4b792b3ce707ae1640 255 Gene3D G3DSA:3.30.1340.10 1 85 7.5E-8 T 11-10-2018 IPR035895 HPr-like superfamily AMS64_07605 c0883f972b2e4c4b792b3ce707ae1640 255 Pfam PF00381 PTS HPr component phosphorylation site 4 76 9.9E-7 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMS64_07605 c0883f972b2e4c4b792b3ce707ae1640 255 SUPERFAMILY SSF55594 1 79 7.85E-10 T 11-10-2018 IPR035895 HPr-like superfamily AMS64_07605 c0883f972b2e4c4b792b3ce707ae1640 255 SUPERFAMILY SSF55804 123 243 1.96E-21 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_07605 c0883f972b2e4c4b792b3ce707ae1640 255 Gene3D G3DSA:3.40.930.10 113 250 4.2E-22 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMS64_07605 c0883f972b2e4c4b792b3ce707ae1640 255 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 126 241 1.3E-18 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMS64_13490 876eef7072b2b48df2b79bcfe057bf25 245 SUPERFAMILY SSF54862 54 201 1.72E-26 T 11-10-2018 AMS64_13490 876eef7072b2b48df2b79bcfe057bf25 245 Gene3D G3DSA:3.30.70.20 129 215 5.0E-9 T 11-10-2018 AMS64_13490 876eef7072b2b48df2b79bcfe057bf25 245 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 4 213 2.1E-79 T 11-10-2018 IPR004494 MauM/NapG ferredoxin-type protein AMS64_13490 876eef7072b2b48df2b79bcfe057bf25 245 Gene3D G3DSA:3.30.70.20 50 128 6.3E-11 T 11-10-2018 AMS64_13490 876eef7072b2b48df2b79bcfe057bf25 245 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_13490 876eef7072b2b48df2b79bcfe057bf25 245 Pfam PF12800 4Fe-4S binding domain 133 151 0.024 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_13490 876eef7072b2b48df2b79bcfe057bf25 245 Pfam PF12800 4Fe-4S binding domain 180 192 0.45 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_13490 876eef7072b2b48df2b79bcfe057bf25 245 Pfam PF12838 4Fe-4S dicluster domain 56 111 4.9E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_07685 96a7567263f29eefcab3c7c633710429 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.3E-25 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_07685 96a7567263f29eefcab3c7c633710429 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.3E-25 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_07685 96a7567263f29eefcab3c7c633710429 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.3E-25 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_07685 96a7567263f29eefcab3c7c633710429 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 5.9E-27 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_07685 96a7567263f29eefcab3c7c633710429 88 PIRSF PIRSF004669 1 88 3.3E-26 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMS64_07685 96a7567263f29eefcab3c7c633710429 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 2.4E-34 T 11-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 AMS64_05580 92b9eb1644360934cb2911aa8c1cadfc 137 Gene3D G3DSA:3.10.450.430 1 136 6.4E-43 T 11-10-2018 AMS64_05580 92b9eb1644360934cb2911aa8c1cadfc 137 Pfam PF10980 Protein of unknown function (DUF2787) 17 134 1.1E-33 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AMS64_07370 d5cf1029a12efae3ef7bb596cc615ad8 291 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 19 257 2.0E-21 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AMS64_07370 d5cf1029a12efae3ef7bb596cc615ad8 291 Gene3D G3DSA:3.40.50.300 18 259 2.6E-57 T 11-10-2018 AMS64_07370 d5cf1029a12efae3ef7bb596cc615ad8 291 PIRSF PIRSF003092 3 281 9.5E-82 T 11-10-2018 IPR025501 ATP binding protein MinD AMS64_07370 d5cf1029a12efae3ef7bb596cc615ad8 291 SUPERFAMILY SSF52540 19 281 4.43E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10040 c4e2a36b95197a5fb1667e03fa365dde 199 Pfam PF04542 Sigma-70 region 2 39 105 3.4E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_10040 c4e2a36b95197a5fb1667e03fa365dde 199 Pfam PF08281 Sigma-70, region 4 132 182 3.0E-14 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMS64_10040 c4e2a36b95197a5fb1667e03fa365dde 199 Gene3D G3DSA:1.10.10.10 125 190 1.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_10040 c4e2a36b95197a5fb1667e03fa365dde 199 Gene3D G3DSA:1.10.1740.10 17 101 3.5E-19 T 11-10-2018 AMS64_10040 c4e2a36b95197a5fb1667e03fa365dde 199 SUPERFAMILY SSF88659 125 188 6.17E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_10040 c4e2a36b95197a5fb1667e03fa365dde 199 SUPERFAMILY SSF88946 19 120 3.65E-22 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMS64_10040 c4e2a36b95197a5fb1667e03fa365dde 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 187 1.8E-24 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMS64_14935 8a71a5715e15aa02948da60f2c721fae 497 SMART SM00327 321 487 0.008 T 11-10-2018 IPR002035 von Willebrand factor, type A AMS64_14935 8a71a5715e15aa02948da60f2c721fae 497 SUPERFAMILY SSF53300 318 459 5.26E-18 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_14935 8a71a5715e15aa02948da60f2c721fae 497 Gene3D G3DSA:3.40.50.410 323 477 1.5E-7 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_07120 5dc2c57b1e872db9bbe2ecf1dd68a7c1 233 SUPERFAMILY SSF161098 9 222 1.28E-29 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_07120 5dc2c57b1e872db9bbe2ecf1dd68a7c1 233 Gene3D G3DSA:1.10.3720.10 3 231 9.9E-26 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_07120 5dc2c57b1e872db9bbe2ecf1dd68a7c1 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 221 9.4E-7 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_12385 f7def9bad989a56b46d897f062633ea9 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12385 f7def9bad989a56b46d897f062633ea9 290 Gene3D G3DSA:3.40.190.10 109 274 1.3E-11 T 11-10-2018 AMS64_12385 f7def9bad989a56b46d897f062633ea9 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.6E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12385 f7def9bad989a56b46d897f062633ea9 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.6E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12385 f7def9bad989a56b46d897f062633ea9 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.6E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_12385 f7def9bad989a56b46d897f062633ea9 290 Gene3D G3DSA:3.40.190.10 160 252 1.3E-11 T 11-10-2018 AMS64_12385 f7def9bad989a56b46d897f062633ea9 290 Pfam PF03466 LysR substrate binding domain 87 274 3.1E-21 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_12385 f7def9bad989a56b46d897f062633ea9 290 SUPERFAMILY SSF53850 88 274 4.03E-24 T 11-10-2018 AMS64_12385 f7def9bad989a56b46d897f062633ea9 290 Gene3D G3DSA:1.10.10.10 1 86 3.4E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_12385 f7def9bad989a56b46d897f062633ea9 290 SUPERFAMILY SSF46785 1 81 1.82E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_19550 d5942d631c49c401152eddbabdb7c4b5 177 Gene3D G3DSA:3.30.70.260 1 85 2.1E-23 T 11-10-2018 AMS64_19550 d5942d631c49c401152eddbabdb7c4b5 177 SUPERFAMILY SSF55021 97 166 1.44E-8 T 11-10-2018 AMS64_19550 d5942d631c49c401152eddbabdb7c4b5 177 Pfam PF13740 ACT domain 3 78 2.6E-24 T 11-10-2018 AMS64_19550 d5942d631c49c401152eddbabdb7c4b5 177 SUPERFAMILY SSF55021 1 83 4.25E-16 T 11-10-2018 AMS64_19550 d5942d631c49c401152eddbabdb7c4b5 177 Gene3D G3DSA:3.30.70.260 88 169 7.2E-11 T 11-10-2018 AMS64_19550 d5942d631c49c401152eddbabdb7c4b5 177 PIRSF PIRSF028103 1 168 5.0E-46 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AMS64_20350 c24f7c49e4a9eec3ac32227ae9a879fb 541 SUPERFAMILY SSF161098 6 257 5.61E-43 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_20350 c24f7c49e4a9eec3ac32227ae9a879fb 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 250 7.2E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_20350 c24f7c49e4a9eec3ac32227ae9a879fb 541 SUPERFAMILY SSF161098 281 534 1.5E-36 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_20350 c24f7c49e4a9eec3ac32227ae9a879fb 541 Gene3D G3DSA:1.10.3720.10 6 268 1.1E-53 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_20350 c24f7c49e4a9eec3ac32227ae9a879fb 541 Gene3D G3DSA:1.10.3720.10 282 537 1.1E-32 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_04120 38df179843adac94c353aa61c54a7c22 296 TIGRFAM TIGR00688 rarD: protein RarD 9 256 1.7E-43 T 11-10-2018 IPR004626 RarD protein GO:0005887 AMS64_04120 38df179843adac94c353aa61c54a7c22 296 Pfam PF00892 EamA-like transporter family 9 141 2.5E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_04120 38df179843adac94c353aa61c54a7c22 296 Pfam PF00892 EamA-like transporter family 158 281 1.2E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_04120 38df179843adac94c353aa61c54a7c22 296 SUPERFAMILY SSF103481 208 283 3.79E-10 T 11-10-2018 AMS64_04120 38df179843adac94c353aa61c54a7c22 296 SUPERFAMILY SSF103481 45 141 1.44E-11 T 11-10-2018 AMS64_17560 55a4234b0819eaad5ac86bf048808615 299 SUPERFAMILY SSF103481 190 289 1.57E-14 T 11-10-2018 AMS64_17560 55a4234b0819eaad5ac86bf048808615 299 Pfam PF00892 EamA-like transporter family 155 283 3.9E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_17560 55a4234b0819eaad5ac86bf048808615 299 Pfam PF00892 EamA-like transporter family 6 139 1.9E-27 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_17560 55a4234b0819eaad5ac86bf048808615 299 SUPERFAMILY SSF103481 39 141 1.57E-16 T 11-10-2018 AMS64_04900 40f3c0cdc1962df1e711706356c8e628 203 Pfam PF02441 Flavoprotein 4 179 8.1E-25 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AMS64_04900 40f3c0cdc1962df1e711706356c8e628 203 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 3 200 34.914 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AMS64_04900 40f3c0cdc1962df1e711706356c8e628 203 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 5 198 2.2E-60 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AMS64_04900 40f3c0cdc1962df1e711706356c8e628 203 Gene3D G3DSA:3.40.50.1950 1 201 1.1E-78 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMS64_04900 40f3c0cdc1962df1e711706356c8e628 203 SUPERFAMILY SSF52507 3 199 4.19E-57 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMS64_02940 db154a6b697c23c58760c5a9c5d5c8da 209 Gene3D G3DSA:3.40.30.10 11 200 2.7E-80 T 11-10-2018 AMS64_02940 db154a6b697c23c58760c5a9c5d5c8da 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 192 4.0E-9 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMS64_02940 db154a6b697c23c58760c5a9c5d5c8da 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 1.6E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMS64_02940 db154a6b697c23c58760c5a9c5d5c8da 209 SUPERFAMILY SSF47616 82 206 1.42E-22 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMS64_02940 db154a6b697c23c58760c5a9c5d5c8da 209 Gene3D G3DSA:1.20.1050.10 89 191 2.7E-80 T 11-10-2018 AMS64_02940 db154a6b697c23c58760c5a9c5d5c8da 209 SUPERFAMILY SSF52833 8 86 6.23E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_09405 8f0d1cd18552da2aaaed9941e024794b 205 SUPERFAMILY SSF47616 83 203 1.67E-20 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMS64_09405 8f0d1cd18552da2aaaed9941e024794b 205 SUPERFAMILY SSF52833 1 85 7.78E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_09405 8f0d1cd18552da2aaaed9941e024794b 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 76 4.1E-12 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMS64_09405 8f0d1cd18552da2aaaed9941e024794b 205 Gene3D G3DSA:3.40.30.10 1 87 1.2E-24 T 11-10-2018 AMS64_09405 8f0d1cd18552da2aaaed9941e024794b 205 Pfam PF13410 Glutathione S-transferase, C-terminal domain 134 192 2.1E-8 T 11-10-2018 AMS64_09405 8f0d1cd18552da2aaaed9941e024794b 205 Gene3D G3DSA:1.20.1050.10 88 196 6.5E-41 T 11-10-2018 AMS64_15130 d7377912092b722c7c111c088343ead5 810 Gene3D G3DSA:1.10.3810.10 83 277 6.3E-51 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_15130 d7377912092b722c7c111c088343ead5 810 SUPERFAMILY SSF53955 79 296 6.75E-60 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_15130 d7377912092b722c7c111c088343ead5 810 Pfam PF00905 Penicillin binding protein transpeptidase domain 341 557 1.4E-13 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMS64_15130 d7377912092b722c7c111c088343ead5 810 Gene3D G3DSA:3.40.710.10 294 644 4.6E-69 T 11-10-2018 AMS64_15130 d7377912092b722c7c111c088343ead5 810 SUPERFAMILY SSF56601 247 661 2.09E-89 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMS64_15130 d7377912092b722c7c111c088343ead5 810 Pfam PF00912 Transglycosylase 92 265 6.2E-48 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_15130 d7377912092b722c7c111c088343ead5 810 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 80 798 2.4E-219 T 11-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMS64_03040 4f5084fa7b688e37a68be6b70f275493 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 104 14.071 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMS64_03040 4f5084fa7b688e37a68be6b70f275493 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 1.3E-8 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMS64_03040 4f5084fa7b688e37a68be6b70f275493 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 34 50 1.3E-8 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMS64_03040 4f5084fa7b688e37a68be6b70f275493 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 1.3E-8 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMS64_03040 4f5084fa7b688e37a68be6b70f275493 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 11 102 8.7E-15 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMS64_03040 4f5084fa7b688e37a68be6b70f275493 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 21 103 2.4E-22 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMS64_21385 d958babe36f3e050ce3d7f5529fd336e 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 3.7E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_21385 d958babe36f3e050ce3d7f5529fd336e 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 1.3E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_21385 d958babe36f3e050ce3d7f5529fd336e 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_21385 d958babe36f3e050ce3d7f5529fd336e 149 Gene3D G3DSA:3.30.700.10 7 149 1.7E-15 T 11-10-2018 AMS64_21385 d958babe36f3e050ce3d7f5529fd336e 149 SUPERFAMILY SSF54523 7 131 2.67E-16 T 11-10-2018 AMS64_11975 cf2d607c8d0b1d0e760175dfc699fd5a 78 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 68 1.9E-19 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AMS64_04350 c55b4c80c982b8e6bfb3b5a9fe52a13b 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 150 1.5E-10 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_04350 c55b4c80c982b8e6bfb3b5a9fe52a13b 219 SUPERFAMILY SSF51161 62 204 6.93E-42 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_04350 c55b4c80c982b8e6bfb3b5a9fe52a13b 219 Gene3D G3DSA:2.160.10.10 1 215 1.3E-59 T 11-10-2018 AMS64_04350 c55b4c80c982b8e6bfb3b5a9fe52a13b 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 125 153 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMS64_09490 ba145d2ce2b5ac0571856018056c4c58 204 SUPERFAMILY SSF46626 21 200 2.9E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_09490 ba145d2ce2b5ac0571856018056c4c58 204 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 183 2.4E-79 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AMS64_09490 ba145d2ce2b5ac0571856018056c4c58 204 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 7 182 4.2E-82 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AMS64_09490 ba145d2ce2b5ac0571856018056c4c58 204 Gene3D G3DSA:1.10.760.10 44 204 2.1E-71 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMS64_14385 083dad0ac46ad107a16aee8cd33fd1d6 82 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1 62 7.1E-19 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AMS64_14385 083dad0ac46ad107a16aee8cd33fd1d6 82 Gene3D G3DSA:3.30.70.330 1 82 4.2E-24 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMS64_14385 083dad0ac46ad107a16aee8cd33fd1d6 82 SMART SM00360 1 64 7.9E-13 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AMS64_14385 083dad0ac46ad107a16aee8cd33fd1d6 82 SUPERFAMILY SSF54928 1 80 8.42E-25 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 AMS64_07880 49135e33c2b0f9bfd7241c4020ec4140 352 Pfam PF07786 Protein of unknown function (DUF1624) 7 218 2.8E-18 T 11-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 AMS64_06810 23c3dc90efae309993214a174bdb6167 192 Gene3D G3DSA:2.50.20.10 21 190 3.2E-55 T 11-10-2018 AMS64_06810 23c3dc90efae309993214a174bdb6167 192 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 5 189 5.6E-46 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AMS64_06810 23c3dc90efae309993214a174bdb6167 192 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 1 190 25.103 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AMS64_06810 23c3dc90efae309993214a174bdb6167 192 Pfam PF03550 Outer membrane lipoprotein LolB 41 188 2.2E-48 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AMS64_06810 23c3dc90efae309993214a174bdb6167 192 SUPERFAMILY SSF89392 16 190 2.0E-46 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMS64_21095 c91f6fd0d4c5830c355f3141be976054 212 PIRSF PIRSF033239 1 208 1.8E-53 T 11-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD AMS64_21095 c91f6fd0d4c5830c355f3141be976054 212 Pfam PF06055 Exopolysaccharide synthesis, ExoD 13 194 5.2E-52 T 11-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD AMS64_12370 957ded7094a6222943403a080f795995 167 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 24 158 3.7E-32 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 AMS64_21825 09eff1c94482ae05eaac041ad3b8eb1a 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 56 101 8.6E-12 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMS64_21825 09eff1c94482ae05eaac041ad3b8eb1a 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 39 118 6.9E-15 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMS64_21825 09eff1c94482ae05eaac041ad3b8eb1a 177 Gene3D G3DSA:1.20.1290.10 13 172 1.0E-39 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMS64_21825 09eff1c94482ae05eaac041ad3b8eb1a 177 SUPERFAMILY SSF69118 5 174 3.24E-43 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMS64_21480 2469f17fb8300389e7450b1d69f767d6 411 Hamap MF_00372 Imidazolonepropionase [hutI]. 9 408 40.59 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_21480 2469f17fb8300389e7450b1d69f767d6 411 Gene3D G3DSA:2.30.40.10 14 405 3.5E-172 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_21480 2469f17fb8300389e7450b1d69f767d6 411 Gene3D G3DSA:3.20.20.140 70 368 3.5E-172 T 11-10-2018 AMS64_21480 2469f17fb8300389e7450b1d69f767d6 411 SUPERFAMILY SSF51556 69 369 9.0E-89 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_21480 2469f17fb8300389e7450b1d69f767d6 411 TIGRFAM TIGR01224 hutI: imidazolonepropionase 33 406 1.1E-142 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMS64_21480 2469f17fb8300389e7450b1d69f767d6 411 Pfam PF01979 Amidohydrolase family 66 383 1.2E-15 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMS64_21480 2469f17fb8300389e7450b1d69f767d6 411 SUPERFAMILY SSF51338 8 407 3.67E-27 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_05020 3181675f59b70d3b83a0c0a56e3c9716 284 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 268 41.393 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AMS64_05020 3181675f59b70d3b83a0c0a56e3c9716 284 Gene3D G3DSA:3.40.50.150 1 284 5.6E-111 T 11-10-2018 AMS64_05020 3181675f59b70d3b83a0c0a56e3c9716 284 SUPERFAMILY SSF53335 9 280 1.89E-91 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_05020 3181675f59b70d3b83a0c0a56e3c9716 284 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 279 5.8E-83 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AMS64_14580 4847eb7360eef661e398ec58a9d2150a 160 SUPERFAMILY SSF56524 38 158 8.5E-18 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMS64_03790 b74a477d807940979cfbc45ddfa4088a 490 Pfam PF03577 Peptidase family C69 23 403 2.6E-90 T 11-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 AMS64_03790 b74a477d807940979cfbc45ddfa4088a 490 Gene3D G3DSA:3.60.60.10 24 273 1.5E-13 T 11-10-2018 AMS64_11375 ab3ade4dc71e33ba3ed42dbf2cdd3983 474 Pfam PF01593 Flavin containing amine oxidoreductase 17 280 3.1E-19 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMS64_11375 ab3ade4dc71e33ba3ed42dbf2cdd3983 474 SUPERFAMILY SSF51905 7 449 7.12E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_11375 ab3ade4dc71e33ba3ed42dbf2cdd3983 474 Gene3D G3DSA:3.50.50.60 1 473 6.4E-107 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_11375 ab3ade4dc71e33ba3ed42dbf2cdd3983 474 PRINTS PR00419 Adrenodoxin reductase family signature 31 44 3.5E-9 T 11-10-2018 AMS64_11375 ab3ade4dc71e33ba3ed42dbf2cdd3983 474 PRINTS PR00419 Adrenodoxin reductase family signature 8 30 3.5E-9 T 11-10-2018 AMS64_01165 98372c04483b51fca817975cf3b07c57 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.709 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01165 98372c04483b51fca817975cf3b07c57 55 Gene3D G3DSA:2.20.28.120 1 55 2.0E-29 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01165 98372c04483b51fca817975cf3b07c57 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 6.2E-26 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01165 98372c04483b51fca817975cf3b07c57 55 Pfam PF00471 Ribosomal protein L33 7 53 1.7E-16 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01165 98372c04483b51fca817975cf3b07c57 55 SUPERFAMILY SSF57829 1 53 1.89E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMS64_01165 98372c04483b51fca817975cf3b07c57 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_17320 4c8976b70e627bd5e3094c5e50ee2a4b 177 Gene3D G3DSA:1.20.120.450 1 158 1.7E-26 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMS64_17320 4c8976b70e627bd5e3094c5e50ee2a4b 177 SUPERFAMILY SSF109854 9 156 1.12E-29 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMS64_17320 4c8976b70e627bd5e3094c5e50ee2a4b 177 Pfam PF05163 DinB family 1 162 2.4E-20 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB AMS64_13175 4092f5036d27e826e5aa72545ca4e6ed 328 Pfam PF04338 Protein of unknown function, DUF481 108 301 2.3E-17 T 11-10-2018 IPR007433 Protein of unknown function DUF481 AMS64_06370 2e968ed840f85324e6c721b46923e6e0 318 Gene3D G3DSA:3.40.50.720 25 314 1.3E-108 T 11-10-2018 AMS64_06370 2e968ed840f85324e6c721b46923e6e0 318 SUPERFAMILY SSF51735 101 288 2.75E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_06370 2e968ed840f85324e6c721b46923e6e0 318 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMS64_06370 2e968ed840f85324e6c721b46923e6e0 318 SUPERFAMILY SSF52283 4 137 2.13E-28 T 11-10-2018 AMS64_06370 2e968ed840f85324e6c721b46923e6e0 318 Gene3D G3DSA:3.40.50.720 97 286 1.3E-108 T 11-10-2018 AMS64_06370 2e968ed840f85324e6c721b46923e6e0 318 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMS64_06370 2e968ed840f85324e6c721b46923e6e0 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 315 4.4E-23 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMS64_06370 2e968ed840f85324e6c721b46923e6e0 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 287 3.3E-55 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMS64_13865 8aeb7fa41be9d5a359d38634d4990451 308 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 233 301 3.3E-14 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AMS64_13865 8aeb7fa41be9d5a359d38634d4990451 308 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 41 302 9.2E-55 T 11-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 AMS64_13865 8aeb7fa41be9d5a359d38634d4990451 308 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 175 185 2.0E-10 T 11-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AMS64_13865 8aeb7fa41be9d5a359d38634d4990451 308 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 235 247 2.0E-10 T 11-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AMS64_13865 8aeb7fa41be9d5a359d38634d4990451 308 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 279 296 2.0E-10 T 11-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AMS64_13865 8aeb7fa41be9d5a359d38634d4990451 308 SUPERFAMILY SSF101801 232 306 8.63E-17 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_13865 8aeb7fa41be9d5a359d38634d4990451 308 SUPERFAMILY SSF101801 151 212 1.05E-5 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_13865 8aeb7fa41be9d5a359d38634d4990451 308 Gene3D G3DSA:2.30.330.10 219 308 1.8E-26 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_18345 99c2151822dc8bef79dc30cbac2ef398 190 Pfam PF11355 Protein of unknown function (DUF3157) 8 170 3.6E-34 T 11-10-2018 IPR021501 Protein of unknown function DUF3157 AMS64_11065 da2d7834e3393e61cf98484302af8009 665 SUPERFAMILY SSF48208 472 578 5.53E-7 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMS64_17005 fb1701f50288b350a8d76c3060d5e4a0 128 Pfam PF04343 Protein of unknown function, DUF488 12 120 1.3E-14 T 11-10-2018 IPR007438 Protein of unknown function DUF488 AMS64_10795 ec9f552af965a60d2cf0e373454a4b8d 306 Pfam PF13737 Transposase DDE domain 20 131 7.7E-38 T 11-10-2018 IPR025668 Transposase DDE domain AMS64_12305 7bb7d85c0e24291a751c84f235af5611 334 Gene3D G3DSA:1.10.150.130 52 161 1.1E-11 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_12305 7bb7d85c0e24291a751c84f235af5611 334 SUPERFAMILY SSF56349 59 321 4.41E-50 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_12305 7bb7d85c0e24291a751c84f235af5611 334 Pfam PF00589 Phage integrase family 162 320 1.2E-8 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_12305 7bb7d85c0e24291a751c84f235af5611 334 Gene3D G3DSA:1.10.443.10 162 324 4.1E-23 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_14840 2c14f9c76b63c0b4167db001fba25142 270 Pfam PF03618 Kinase/pyrophosphorylase 4 260 4.3E-75 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AMS64_14840 2c14f9c76b63c0b4167db001fba25142 270 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 1 269 75.185 T 11-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AMS64_01965 ed2bc6938daeba895127f7e23cfd7a5f 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 9.4E-66 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AMS64_01965 ed2bc6938daeba895127f7e23cfd7a5f 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 34.196 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01965 ed2bc6938daeba895127f7e23cfd7a5f 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.5E-76 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_01965 ed2bc6938daeba895127f7e23cfd7a5f 201 Gene3D G3DSA:3.40.1370.10 2 201 1.2E-70 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AMS64_01965 ed2bc6938daeba895127f7e23cfd7a5f 201 SUPERFAMILY SSF52166 10 200 1.2E-73 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AMS64_07410 bfb5def2ba9a3f835042a4327fa90138 264 Pfam PF13614 AAA domain 5 179 2.3E-50 T 11-10-2018 IPR025669 AAA domain AMS64_07410 bfb5def2ba9a3f835042a4327fa90138 264 PIRSF PIRSF009320 107 228 1.9E-7 T 11-10-2018 AMS64_07410 bfb5def2ba9a3f835042a4327fa90138 264 PIRSF PIRSF009320 1 112 6.3E-15 T 11-10-2018 AMS64_07410 bfb5def2ba9a3f835042a4327fa90138 264 SUPERFAMILY SSF52540 3 253 5.19E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_07410 bfb5def2ba9a3f835042a4327fa90138 264 Gene3D G3DSA:3.40.50.300 3 260 8.9E-66 T 11-10-2018 AMS64_19985 c2c2f7f79382dd099ea38c1ca26751d2 145 Pfam PF09335 SNARE associated Golgi protein 30 140 1.7E-8 T 11-10-2018 IPR032816 SNARE associated Golgi protein AMS64_19985 c2c2f7f79382dd099ea38c1ca26751d2 145 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 12 139 6.0E-6 T 11-10-2018 IPR020143 Uncharacterised protein family, RP436 AMS64_11270 a54b1a2ae503da2bd635bc1b23059287 201 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 24 201 3.2E-62 T 11-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 AMS64_11270 a54b1a2ae503da2bd635bc1b23059287 201 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 28 201 2.3E-44 T 11-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 AMS64_05605 bd828a2634deffa7e624b0ab7ec02e65 672 Pfam PF06048 Domain of unknown function (DUF927) 70 336 3.0E-31 T 11-10-2018 IPR009270 Domain of unknown function DUF927 AMS64_14465 730f36841153935a9dffbe1b93f26b5e 310 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 22 74 5.0E-18 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain AMS64_14465 730f36841153935a9dffbe1b93f26b5e 310 Pfam PF00691 OmpA family 191 289 3.5E-12 T 11-10-2018 IPR006665 OmpA-like domain AMS64_14465 730f36841153935a9dffbe1b93f26b5e 310 SUPERFAMILY SSF103088 178 295 2.75E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_14465 730f36841153935a9dffbe1b93f26b5e 310 Gene3D G3DSA:3.30.1330.60 150 297 6.8E-41 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_18895 c6beb81848a9f5cc55089b09dd54bba4 137 Gene3D G3DSA:1.10.940.10 1 137 3.3E-49 T 11-10-2018 IPR035926 NusB-like superfamily AMS64_18895 c6beb81848a9f5cc55089b09dd54bba4 137 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 5 133 4.3E-44 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AMS64_18895 c6beb81848a9f5cc55089b09dd54bba4 137 Pfam PF01029 NusB family 7 132 9.9E-36 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMS64_18895 c6beb81848a9f5cc55089b09dd54bba4 137 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 22.803 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AMS64_18895 c6beb81848a9f5cc55089b09dd54bba4 137 SUPERFAMILY SSF48013 3 135 5.36E-44 T 11-10-2018 IPR035926 NusB-like superfamily AMS64_03365 c03c1566715be85fddcae5e674a0b834 320 Gene3D G3DSA:3.30.450.40 9 162 1.9E-21 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_03365 c03c1566715be85fddcae5e674a0b834 320 Gene3D G3DSA:3.30.70.270 163 320 3.2E-44 T 11-10-2018 AMS64_03365 c03c1566715be85fddcae5e674a0b834 320 SUPERFAMILY SSF55781 28 163 1.81E-30 T 11-10-2018 AMS64_03365 c03c1566715be85fddcae5e674a0b834 320 SMART SM00267 151 320 1.5E-34 T 11-10-2018 IPR000160 GGDEF domain AMS64_03365 c03c1566715be85fddcae5e674a0b834 320 SMART SM00065 26 168 8.3E-15 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_03365 c03c1566715be85fddcae5e674a0b834 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 319 4.5E-38 T 11-10-2018 IPR000160 GGDEF domain AMS64_03365 c03c1566715be85fddcae5e674a0b834 320 SUPERFAMILY SSF55073 169 319 2.59E-40 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_03365 c03c1566715be85fddcae5e674a0b834 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 319 2.1E-37 T 11-10-2018 IPR000160 GGDEF domain AMS64_03365 c03c1566715be85fddcae5e674a0b834 320 Pfam PF01590 GAF domain 28 157 1.8E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMS64_05685 82540a88c4e00c6e1a1fdb2ac5ef5cd1 98 SUPERFAMILY SSF141488 23 97 3.53E-17 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily AMS64_05685 82540a88c4e00c6e1a1fdb2ac5ef5cd1 98 Gene3D G3DSA:2.40.128.200 22 98 2.0E-15 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily AMS64_05685 82540a88c4e00c6e1a1fdb2ac5ef5cd1 98 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 29 91 1.8E-11 T 11-10-2018 IPR018660 C-type lysozyme inhibitor AMS64_17290 a2ff556753245d720ad304c4d3e43e9f 116 SUPERFAMILY SSF69721 6 116 2.22E-41 T 11-10-2018 IPR025526 DsrC-like domain superfamily AMS64_17290 a2ff556753245d720ad304c4d3e43e9f 116 Gene3D G3DSA:3.30.1420.10 6 45 1.4E-12 T 11-10-2018 AMS64_17290 a2ff556753245d720ad304c4d3e43e9f 116 Gene3D G3DSA:1.10.10.370 46 116 7.5E-30 T 11-10-2018 AMS64_17290 a2ff556753245d720ad304c4d3e43e9f 116 PIRSF PIRSF006223 9 116 5.1E-44 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AMS64_17290 a2ff556753245d720ad304c4d3e43e9f 116 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 9 116 4.1E-48 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AMS64_17290 a2ff556753245d720ad304c4d3e43e9f 116 Pfam PF04358 DsrC like protein 10 116 3.3E-44 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AMS64_11415 753832fb7ef3941bdbfcd1f9ee53436e 357 SUPERFAMILY SSF159245 38 357 5.1E-96 T 11-10-2018 AMS64_11415 753832fb7ef3941bdbfcd1f9ee53436e 357 Pfam PF17186 Lipocalin-like domain 233 357 4.7E-40 T 11-10-2018 AMS64_11415 753832fb7ef3941bdbfcd1f9ee53436e 357 Gene3D G3DSA:2.40.370.10 235 357 7.5E-38 T 11-10-2018 IPR023374 AttH-like domain superfamily AMS64_11415 753832fb7ef3941bdbfcd1f9ee53436e 357 Pfam PF07143 CrtC N-terminal lipocalin domain 62 230 4.7E-54 T 11-10-2018 IPR010791 AttH domain AMS64_11415 753832fb7ef3941bdbfcd1f9ee53436e 357 Gene3D G3DSA:2.40.370.10 49 233 1.1E-65 T 11-10-2018 IPR023374 AttH-like domain superfamily AMS64_16055 062085d3b00e9db1599ad90b56d7586b 204 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 9.6E-9 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMS64_16055 062085d3b00e9db1599ad90b56d7586b 204 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMS64_16055 062085d3b00e9db1599ad90b56d7586b 204 Gene3D G3DSA:1.20.120.1760 5 198 8.6E-22 T 11-10-2018 AMS64_15605 5c9d507c44bcba7ae28f95629453c642 107 SUPERFAMILY SSF143011 9 90 1.57E-5 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AMS64_15605 5c9d507c44bcba7ae28f95629453c642 107 Gene3D G3DSA:3.30.2310.20 7 99 1.9E-6 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AMS64_15605 5c9d507c44bcba7ae28f95629453c642 107 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 11 96 7.9E-32 T 11-10-2018 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin AMS64_18170 23e6b7dee8cd34694860ce676821683f 209 Pfam PF12697 Alpha/beta hydrolase family 16 183 6.9E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMS64_18170 23e6b7dee8cd34694860ce676821683f 209 SUPERFAMILY SSF53474 15 183 1.39E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_18170 23e6b7dee8cd34694860ce676821683f 209 Gene3D G3DSA:3.40.50.1820 14 195 3.4E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_12555 818a54d41d092cea1d3181ba05269fc8 526 Pfam PF12146 Serine aminopeptidase, S33 117 342 3.3E-12 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AMS64_12555 818a54d41d092cea1d3181ba05269fc8 526 SUPERFAMILY SSF53474 79 343 5.27E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_12555 818a54d41d092cea1d3181ba05269fc8 526 Gene3D G3DSA:3.40.50.1820 107 347 2.6E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_17155 7695cd24d83ae9e51b792028ed9cd4d8 676 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 482 494 2.1E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMS64_17155 7695cd24d83ae9e51b792028ed9cd4d8 676 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 503 519 2.1E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMS64_17155 7695cd24d83ae9e51b792028ed9cd4d8 676 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 574 585 2.1E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMS64_17155 7695cd24d83ae9e51b792028ed9cd4d8 676 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 464 476 2.1E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMS64_17155 7695cd24d83ae9e51b792028ed9cd4d8 676 Gene3D G3DSA:3.40.390.10 38 676 5.4E-231 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMS64_17155 7695cd24d83ae9e51b792028ed9cd4d8 676 Pfam PF05649 Peptidase family M13 45 420 2.1E-92 T 11-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AMS64_17155 7695cd24d83ae9e51b792028ed9cd4d8 676 Gene3D G3DSA:1.10.1380.10 69 459 5.4E-231 T 11-10-2018 AMS64_17155 7695cd24d83ae9e51b792028ed9cd4d8 676 Pfam PF01431 Peptidase family M13 472 673 5.4E-75 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMS64_17155 7695cd24d83ae9e51b792028ed9cd4d8 676 SUPERFAMILY SSF55486 30 676 1.33E-202 T 11-10-2018 AMS64_11355 11e4dd50a22c3ecdf115a7599cf51adf 161 Pfam PF03350 Uncharacterized protein family, UPF0114 10 123 1.3E-21 T 11-10-2018 IPR005134 Uncharacterised protein family UPF0114 AMS64_11355 11e4dd50a22c3ecdf115a7599cf51adf 161 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 161 35.962 T 11-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AMS64_20750 6279bdc42a695f32986b9254454edd02 342 SUPERFAMILY SSF53335 172 321 4.22E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_20750 6279bdc42a695f32986b9254454edd02 342 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 5 342 44.151 T 11-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 AMS64_20750 6279bdc42a695f32986b9254454edd02 342 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 271 277 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMS64_20750 6279bdc42a695f32986b9254454edd02 342 Gene3D G3DSA:3.40.50.150 2 161 1.8E-42 T 11-10-2018 AMS64_20750 6279bdc42a695f32986b9254454edd02 342 Gene3D G3DSA:3.40.50.150 170 341 3.5E-41 T 11-10-2018 AMS64_20750 6279bdc42a695f32986b9254454edd02 342 Pfam PF08468 Methyltransferase small domain N-terminal 9 165 2.8E-46 T 11-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 AMS64_20750 6279bdc42a695f32986b9254454edd02 342 Pfam PF05175 Methyltransferase small domain 173 338 4.1E-55 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AMS64_20515 b4f6e5d128cde6f556dfdffd16f0494a 312 Pfam PF01545 Cation efflux family 28 235 2.4E-41 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMS64_20515 b4f6e5d128cde6f556dfdffd16f0494a 312 SUPERFAMILY SSF161111 21 236 1.96E-51 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMS64_20515 b4f6e5d128cde6f556dfdffd16f0494a 312 Gene3D G3DSA:1.20.1510.10 21 235 3.0E-31 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMS64_20515 b4f6e5d128cde6f556dfdffd16f0494a 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 309 3.6E-67 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMS64_19885 6497be80794e6fdef0c98ef99e707c7b 387 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 351 9.7E-77 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AMS64_19885 6497be80794e6fdef0c98ef99e707c7b 387 SUPERFAMILY SSF103473 3 360 1.57E-58 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_19885 6497be80794e6fdef0c98ef99e707c7b 387 Gene3D G3DSA:1.20.1720.10 3 379 9.6E-92 T 11-10-2018 AMS64_19885 6497be80794e6fdef0c98ef99e707c7b 387 ProSitePatterns PS00216 Sugar transport proteins signature 1. 57 73 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMS64_19885 6497be80794e6fdef0c98ef99e707c7b 387 Pfam PF07690 Major Facilitator Superfamily 8 344 2.4E-45 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_16835 d456e1767d57ac97d3ccbb0706ba7f3a 575 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 1 563 2.0E-180 T 11-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AMS64_16835 d456e1767d57ac97d3ccbb0706ba7f3a 575 PIRSF PIRSF000719 1 575 3.2E-241 T 11-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AMS64_16835 d456e1767d57ac97d3ccbb0706ba7f3a 575 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 44.148 T 11-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AMS64_16835 d456e1767d57ac97d3ccbb0706ba7f3a 575 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 8.2E-244 T 11-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AMS64_04695 e462c8102771eb80b3abc51b9689cea9 574 Gene3D G3DSA:3.30.70.1450 206 287 9.9E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_04695 e462c8102771eb80b3abc51b9689cea9 574 Gene3D G3DSA:3.30.70.1450 290 359 3.8E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_04695 e462c8102771eb80b3abc51b9689cea9 574 Pfam PF03600 Citrate transporter 19 518 4.7E-29 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AMS64_04695 e462c8102771eb80b3abc51b9689cea9 574 Pfam PF02080 TrkA-C domain 210 275 3.5E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMS64_04695 e462c8102771eb80b3abc51b9689cea9 574 Pfam PF02080 TrkA-C domain 293 349 4.8E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMS64_04695 e462c8102771eb80b3abc51b9689cea9 574 SUPERFAMILY SSF116726 198 282 1.96E-15 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_04695 e462c8102771eb80b3abc51b9689cea9 574 SUPERFAMILY SSF116726 290 350 4.58E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMS64_06465 3fd945445d5422288ed0ea16da0ba103 408 Pfam PF06224 Winged helix DNA-binding domain 38 382 9.3E-88 T 11-10-2018 IPR009351 Protein of unknown function DUF1006 AMS64_22415 d9f402ea8a3c94de914718e32470b311 150 SUPERFAMILY SSF46785 2 133 4.13E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_22415 d9f402ea8a3c94de914718e32470b311 150 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 1.0E-32 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AMS64_22415 d9f402ea8a3c94de914718e32470b311 150 Gene3D G3DSA:1.10.10.10 1 137 1.1E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_22415 d9f402ea8a3c94de914718e32470b311 150 Pfam PF02082 Transcriptional regulator 1 80 2.6E-23 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AMS64_22415 d9f402ea8a3c94de914718e32470b311 150 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AMS64_12770 0e306d5d67cacb4784eaa468e267217f 211 Pfam PF01914 MarC family integral membrane protein 7 207 1.6E-61 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMS64_12770 0e306d5d67cacb4784eaa468e267217f 211 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 203 7.4E-64 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMS64_14450 683c18efbcdea4be3c1df7e172bd3479 229 Pfam PF02146 Sir2 family 6 175 5.1E-36 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 AMS64_14450 683c18efbcdea4be3c1df7e172bd3479 229 Gene3D G3DSA:3.30.1600.10 15 147 9.3E-49 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily AMS64_14450 683c18efbcdea4be3c1df7e172bd3479 229 SUPERFAMILY SSF52467 1 202 1.19E-50 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMS64_14450 683c18efbcdea4be3c1df7e172bd3479 229 Gene3D G3DSA:3.40.50.1220 1 192 9.3E-49 T 11-10-2018 AMS64_22280 cb11787de01e5a330c75d5907962dedb 195 Pfam PF04220 Der GTPase activator (YihI) 9 152 4.5E-48 T 11-10-2018 IPR007336 Der GTPase activator GO:0005096 AMS64_22280 cb11787de01e5a330c75d5907962dedb 195 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 182 16.268 T 11-10-2018 IPR007336 Der GTPase activator GO:0005096 AMS64_21390 c31be945fc0d419f105731ae31115ceb 223 Gene3D G3DSA:3.30.700.10 22 221 8.3E-13 T 11-10-2018 AMS64_21390 c31be945fc0d419f105731ae31115ceb 223 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_21390 c31be945fc0d419f105731ae31115ceb 223 SUPERFAMILY SSF54523 22 118 2.51E-13 T 11-10-2018 AMS64_21390 c31be945fc0d419f105731ae31115ceb 223 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 42 5.0E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_21390 c31be945fc0d419f105731ae31115ceb 223 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 42 2.9E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_02860 1a9d43a0d513567d44c4e0cd15637131 371 SUPERFAMILY SSF53383 7 368 2.98E-35 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_02860 1a9d43a0d513567d44c4e0cd15637131 371 Gene3D G3DSA:3.40.640.10 23 276 1.1E-49 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_02860 1a9d43a0d513567d44c4e0cd15637131 371 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 366 2.5E-185 T 11-10-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 AMS64_02860 1a9d43a0d513567d44c4e0cd15637131 371 Pfam PF03841 L-seryl-tRNA selenium transferase 121 270 3.7E-13 T 11-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AMS64_08200 805a3192f99c22a8c8a8bfb888cf8525 258 Pfam PF04250 Protein of unknown function (DUF429) 13 229 4.7E-10 T 11-10-2018 IPR007362 Protein of unknown function DUF429 AMS64_03420 7e1bde33c99ae508802cdaebbdaad660 162 Gene3D G3DSA:3.90.960.10 14 160 1.4E-26 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMS64_03420 7e1bde33c99ae508802cdaebbdaad660 162 Pfam PF04073 Aminoacyl-tRNA editing domain 32 144 3.5E-20 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMS64_03420 7e1bde33c99ae508802cdaebbdaad660 162 SUPERFAMILY SSF55826 17 157 3.66E-28 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMS64_03175 485bc4d2c4f0c3d537c3eb216c6d45ae 152 Pfam PF03748 Flagellar basal body-associated protein FliL 53 152 1.5E-11 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AMS64_19405 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 Pfam PF12221 Bacterial membrane protein N terminal 1 46 1.8E-17 T 11-10-2018 IPR020980 Menbrane protein HflK, N-terminal AMS64_19405 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 SUPERFAMILY SSF117892 104 236 7.32E-21 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AMS64_19405 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 TIGRFAM TIGR01933 hflK: HflK protein 73 334 1.0E-110 T 11-10-2018 IPR010201 HflK GO:0016021 AMS64_19405 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 Pfam PF01145 SPFH domain / Band 7 family 75 246 3.1E-22 T 11-10-2018 IPR001107 Band 7 domain AMS64_19405 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 PRINTS PR00721 Stomatin signature 125 146 7.4E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMS64_19405 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 PRINTS PR00721 Stomatin signature 181 204 7.4E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMS64_19405 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 PRINTS PR00721 Stomatin signature 78 100 7.4E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMS64_19405 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 SMART SM00244 71 231 1.6E-39 T 11-10-2018 IPR001107 Band 7 domain AMS64_19405 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 Gene3D G3DSA:3.30.479.30 100 233 1.3E-17 T 11-10-2018 AMS64_07465 192086cf0ce0f5377285056ceb40ca00 159 Pfam PF03918 Cytochrome C biogenesis protein 11 153 2.8E-55 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AMS64_07465 192086cf0ce0f5377285056ceb40ca00 159 Gene3D G3DSA:1.10.8.640 22 106 7.9E-37 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AMS64_13475 1bcde8d29983b13c8aa00bc2ffda91e2 196 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 7 191 1.0E-98 T 11-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 AMS64_13475 1bcde8d29983b13c8aa00bc2ffda91e2 196 PIRSF PIRSF000013 1 196 1.9E-101 T 11-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 AMS64_13475 1bcde8d29983b13c8aa00bc2ffda91e2 196 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 18 190 8.2E-78 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AMS64_13475 1bcde8d29983b13c8aa00bc2ffda91e2 196 Gene3D G3DSA:1.10.3820.10 14 193 7.0E-39 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily AMS64_13475 1bcde8d29983b13c8aa00bc2ffda91e2 196 SUPERFAMILY SSF48695 13 194 5.66E-62 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AMS64_16095 e13373fae69447d0764b0c3f1fff62cc 157 SUPERFAMILY SSF54637 7 152 1.56E-22 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_16095 e13373fae69447d0764b0c3f1fff62cc 157 Pfam PF14539 Domain of unknown function (DUF4442) 14 148 1.7E-27 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 AMS64_16095 e13373fae69447d0764b0c3f1fff62cc 157 Gene3D G3DSA:3.10.129.10 9 154 3.1E-27 T 11-10-2018 AMS64_18335 4e5e8fb16f430f78175a4b13b9f5f5d9 315 Pfam PF08349 Protein of unknown function (DUF1722) 189 306 1.2E-43 T 11-10-2018 IPR013560 Domain of unknown function DUF1722 AMS64_18335 4e5e8fb16f430f78175a4b13b9f5f5d9 315 Pfam PF04463 Protein of unknown function (DUF523) 6 146 6.7E-38 T 11-10-2018 IPR007553 Domain of unknown function DUF523 AMS64_18335 4e5e8fb16f430f78175a4b13b9f5f5d9 315 PIRSF PIRSF037004 1 315 1.1E-129 T 11-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 AMS64_08570 06b7bb342e0ee7080827dc8d9f322576 167 Gene3D G3DSA:3.30.2010.10 73 161 7.1E-7 T 11-10-2018 AMS64_08570 06b7bb342e0ee7080827dc8d9f322576 167 Pfam PF01863 Protein of unknown function DUF45 92 153 1.5E-13 T 11-10-2018 IPR002725 Protein of unknown function DUF45 AMS64_09215 d62579abe138fd021f4072b0b2ab8d49 191 Pfam PF06560 Glucose-6-phosphate isomerase (GPI) 27 178 1.5E-17 T 11-10-2018 IPR010551 Glucose-6-phosphate isomerase, prokaryote GO:0004347|GO:0005737|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385 AMS64_09215 d62579abe138fd021f4072b0b2ab8d49 191 Gene3D G3DSA:2.60.120.10 2 186 2.4E-47 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_09215 d62579abe138fd021f4072b0b2ab8d49 191 SUPERFAMILY SSF51182 5 167 6.91E-26 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_03205 de08dd7b152202f7abba5b172bd597d4 152 Gene3D G3DSA:2.40.330.20 1 134 5.5E-44 T 11-10-2018 IPR038619 MraZ superfamily AMS64_03205 de08dd7b152202f7abba5b172bd597d4 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 133 9.0E-51 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMS64_03205 de08dd7b152202f7abba5b172bd597d4 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 130 2.4E-19 T 11-10-2018 IPR020603 MraZ domain AMS64_03205 de08dd7b152202f7abba5b172bd597d4 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 8.2E-20 T 11-10-2018 IPR020603 MraZ domain AMS64_03205 de08dd7b152202f7abba5b172bd597d4 152 SUPERFAMILY SSF89447 2 132 7.22E-47 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily AMS64_03205 de08dd7b152202f7abba5b172bd597d4 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 134 7.3E-55 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMS64_03205 de08dd7b152202f7abba5b172bd597d4 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 56.666 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMS64_19485 2a1be85d37c14d52ce9fe74fa1b6d6d5 658 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 441 622 1.4E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_19485 2a1be85d37c14d52ce9fe74fa1b6d6d5 658 Pfam PF00672 HAMP domain 326 376 4.1E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_19485 2a1be85d37c14d52ce9fe74fa1b6d6d5 658 Gene3D G3DSA:1.10.287.950 326 657 1.1E-66 T 11-10-2018 AMS64_19485 2a1be85d37c14d52ce9fe74fa1b6d6d5 658 SUPERFAMILY SSF58104 352 656 1.31E-67 T 11-10-2018 AMS64_19485 2a1be85d37c14d52ce9fe74fa1b6d6d5 658 SMART SM00304 326 379 1.7E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMS64_19485 2a1be85d37c14d52ce9fe74fa1b6d6d5 658 SMART SM00283 394 655 2.4E-68 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMS64_16885 163eb67a1e2101619f0005ef39ed14ee 342 Pfam PF00591 Glycosyl transferase family, a/b domain 73 322 6.2E-100 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_16885 163eb67a1e2101619f0005ef39ed14ee 342 Gene3D G3DSA:1.20.970.10 3 66 6.9E-19 T 11-10-2018 AMS64_16885 163eb67a1e2101619f0005ef39ed14ee 342 Gene3D G3DSA:3.40.1030.10 69 339 8.5E-102 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_16885 163eb67a1e2101619f0005ef39ed14ee 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 37.807 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AMS64_16885 163eb67a1e2101619f0005ef39ed14ee 342 SUPERFAMILY SSF47648 1 65 2.49E-16 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_16885 163eb67a1e2101619f0005ef39ed14ee 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 63 8.5E-16 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_16885 163eb67a1e2101619f0005ef39ed14ee 342 SUPERFAMILY SSF52418 70 329 4.71E-92 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_16885 163eb67a1e2101619f0005ef39ed14ee 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 1.5E-125 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AMS64_18440 3dc96057a6ae2a641114694a635ee2f2 165 Pfam PF04002 RadC-like JAB domain 49 164 1.0E-42 T 11-10-2018 IPR025657 RadC-like JAB domain AMS64_18440 3dc96057a6ae2a641114694a635ee2f2 165 SUPERFAMILY SSF102712 47 138 4.05E-7 T 11-10-2018 AMS64_18440 3dc96057a6ae2a641114694a635ee2f2 165 TIGRFAM TIGR00608 radc: DNA repair protein RadC 27 165 5.1E-46 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AMS64_18440 3dc96057a6ae2a641114694a635ee2f2 165 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 114 119 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AMS64_18440 3dc96057a6ae2a641114694a635ee2f2 165 Gene3D G3DSA:3.40.140.10 41 165 7.7E-43 T 11-10-2018 AMS64_05860 d09cb51e38d3eba527bb22d345792ec1 172 SUPERFAMILY SSF141452 3 168 1.44E-38 T 11-10-2018 IPR036624 Hcp1-like superfamily AMS64_05860 d09cb51e38d3eba527bb22d345792ec1 172 Gene3D G3DSA:2.30.110.20 2 172 9.7E-68 T 11-10-2018 IPR036624 Hcp1-like superfamily AMS64_05860 d09cb51e38d3eba527bb22d345792ec1 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 2.6E-31 T 11-10-2018 IPR008514 Type VI secretion system effector, Hcp AMS64_05860 d09cb51e38d3eba527bb22d345792ec1 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 8.9E-64 T 11-10-2018 IPR008514 Type VI secretion system effector, Hcp AMS64_08160 10d1ebf1af064ae73c90131523c857b2 460 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 453 2.8E-110 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AMS64_08160 10d1ebf1af064ae73c90131523c857b2 460 Pfam PF00939 Sodium:sulfate symporter transmembrane region 41 456 6.4E-50 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AMS64_08160 10d1ebf1af064ae73c90131523c857b2 460 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 407 423 - T 11-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AMS64_21380 7e55abc519db38e14b86bab7682f3dc7 162 SUPERFAMILY SSF54523 7 128 2.43E-10 T 11-10-2018 AMS64_21380 7e55abc519db38e14b86bab7682f3dc7 162 Gene3D G3DSA:3.30.700.10 7 155 3.0E-7 T 11-10-2018 AMS64_21380 7e55abc519db38e14b86bab7682f3dc7 162 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_21380 7e55abc519db38e14b86bab7682f3dc7 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 7.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_21380 7e55abc519db38e14b86bab7682f3dc7 162 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 26 4.3E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_00065 d96a6a768c1a007a228b8470e5838f7e 481 Gene3D G3DSA:1.20.1740.10 13 469 1.0E-6 T 11-10-2018 AMS64_00065 d96a6a768c1a007a228b8470e5838f7e 481 PIRSF PIRSF006060 1 474 2.1E-40 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_00065 d96a6a768c1a007a228b8470e5838f7e 481 Pfam PF13520 Amino acid permease 11 443 2.8E-32 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMS64_02675 b50d95cd6a4cdf71694b076dc4116ffa 387 Gene3D G3DSA:1.25.40.10 78 228 2.3E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_02675 b50d95cd6a4cdf71694b076dc4116ffa 387 Pfam PF07219 HemY protein N-terminus 26 132 2.8E-31 T 11-10-2018 IPR010817 HemY, N-terminal AMS64_02675 b50d95cd6a4cdf71694b076dc4116ffa 387 Gene3D G3DSA:1.25.40.10 229 386 1.2E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_02675 b50d95cd6a4cdf71694b076dc4116ffa 387 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 381 1.7E-92 T 11-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AMS64_02675 b50d95cd6a4cdf71694b076dc4116ffa 387 SUPERFAMILY SSF48452 89 384 3.8E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_16410 262305718cddceaa5e227bbc6e0b2e8d 404 Pfam PF02687 FtsX-like permease family 305 392 7.4E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMS64_16410 262305718cddceaa5e227bbc6e0b2e8d 404 Pfam PF12704 MacB-like periplasmic core domain 22 212 7.8E-23 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AMS64_15085 e3b6acdfa0e554a577a53581bb0e49c2 466 Pfam PF07196 Flagellin hook IN motif 129 180 6.9E-14 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AMS64_15085 e3b6acdfa0e554a577a53581bb0e49c2 466 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 219 451 1.8E-39 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 AMS64_15085 e3b6acdfa0e554a577a53581bb0e49c2 466 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 109 1.1E-12 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AMS64_03925 4904ba41a5f1c959d1c4d2426866d061 166 PIRSF PIRSF030780 1 164 2.4E-56 T 11-10-2018 IPR016956 Inner membrane protein YdjM AMS64_03925 4904ba41a5f1c959d1c4d2426866d061 166 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 157 2.8E-34 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AMS64_05735 228022073641ffb040de26a052437778 71 Hamap MF_00715 Protein SlyX [slyX]. 4 71 16.545 T 11-10-2018 IPR007236 SlyX AMS64_05735 228022073641ffb040de26a052437778 71 Pfam PF04102 SlyX 5 71 1.6E-24 T 11-10-2018 IPR007236 SlyX AMS64_02085 10239ae19f7e331e2eb7f0aed8402d50 127 Pfam PF01196 Ribosomal protein L17 20 116 2.5E-35 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02085 10239ae19f7e331e2eb7f0aed8402d50 127 Gene3D G3DSA:3.90.1030.10 1 117 2.8E-48 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02085 10239ae19f7e331e2eb7f0aed8402d50 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02085 10239ae19f7e331e2eb7f0aed8402d50 127 SUPERFAMILY SSF64263 1 119 3.01E-51 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02085 10239ae19f7e331e2eb7f0aed8402d50 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.772 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_02085 10239ae19f7e331e2eb7f0aed8402d50 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 2.5E-51 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_15960 ba971d31ccc8997aea0c278a9b87173f 650 Pfam PF00593 TonB dependent receptor 268 647 2.0E-61 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMS64_15960 ba971d31ccc8997aea0c278a9b87173f 650 Gene3D G3DSA:2.170.130.10 14 161 1.1E-39 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMS64_15960 ba971d31ccc8997aea0c278a9b87173f 650 SUPERFAMILY SSF56935 37 650 1.76E-124 T 11-10-2018 AMS64_15960 ba971d31ccc8997aea0c278a9b87173f 650 Gene3D G3DSA:2.40.170.20 167 650 3.0E-122 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMS64_15960 ba971d31ccc8997aea0c278a9b87173f 650 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 156 9.8E-27 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMS64_05075 8b45e373296b6e4206291632a35a5854 156 SUPERFAMILY SSF51197 1 153 6.87E-36 T 11-10-2018 AMS64_05075 8b45e373296b6e4206291632a35a5854 156 Pfam PF04074 Domain of unknown function (DUF386) 1 149 1.8E-37 T 11-10-2018 IPR004375 YhcH/YjgK/YiaL family AMS64_05075 8b45e373296b6e4206291632a35a5854 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 4.8E-34 T 11-10-2018 IPR004375 YhcH/YjgK/YiaL family AMS64_05075 8b45e373296b6e4206291632a35a5854 156 Gene3D G3DSA:2.60.120.370 1 153 5.4E-34 T 11-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily AMS64_00550 ed393b4d12e27440252be7851a7d1b52 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 2.3E-114 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00550 ed393b4d12e27440252be7851a7d1b52 288 SUPERFAMILY SSF52943 2 288 1.57E-99 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00550 ed393b4d12e27440252be7851a7d1b52 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00550 ed393b4d12e27440252be7851a7d1b52 288 Gene3D G3DSA:1.10.287.80 6 284 2.3E-113 T 11-10-2018 AMS64_00550 ed393b4d12e27440252be7851a7d1b52 288 Pfam PF00231 ATP synthase 5 287 5.4E-100 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00550 ed393b4d12e27440252be7851a7d1b52 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 37.394 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00550 ed393b4d12e27440252be7851a7d1b52 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 4.5E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00550 ed393b4d12e27440252be7851a7d1b52 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 4.5E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00550 ed393b4d12e27440252be7851a7d1b52 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.5E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00550 ed393b4d12e27440252be7851a7d1b52 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.5E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMS64_00550 ed393b4d12e27440252be7851a7d1b52 288 Gene3D G3DSA:3.40.1380.10 61 207 2.3E-113 T 11-10-2018 AMS64_00495 576a4a91459eae574733184879c80301 149 PRINTS PR00369 Flavodoxin signature 53 64 8.7E-8 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMS64_00495 576a4a91459eae574733184879c80301 149 PRINTS PR00369 Flavodoxin signature 84 94 8.7E-8 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMS64_00495 576a4a91459eae574733184879c80301 149 PRINTS PR00369 Flavodoxin signature 108 127 8.7E-8 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMS64_00495 576a4a91459eae574733184879c80301 149 PRINTS PR00369 Flavodoxin signature 5 18 8.7E-8 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMS64_00495 576a4a91459eae574733184879c80301 149 SUPERFAMILY SSF52218 1 148 8.57E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_00495 576a4a91459eae574733184879c80301 149 Gene3D G3DSA:3.40.50.360 1 149 1.5E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_00495 576a4a91459eae574733184879c80301 149 Pfam PF00258 Flavodoxin 7 140 1.7E-25 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMS64_05525 0d1548228dcf5d8f937ade982b07c30b 211 Pfam PF03006 Haemolysin-III related 9 203 4.9E-38 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AMS64_05525 0d1548228dcf5d8f937ade982b07c30b 211 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 11 210 2.4E-68 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AMS64_06875 ef3cf08527183a48deb97af38bc5ecc4 266 SMART SM00342 173 254 2.4E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_06875 ef3cf08527183a48deb97af38bc5ecc4 266 SUPERFAMILY SSF46689 208 255 2.82E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_06875 ef3cf08527183a48deb97af38bc5ecc4 266 Gene3D G3DSA:1.10.10.60 153 260 1.7E-22 T 11-10-2018 AMS64_06875 ef3cf08527183a48deb97af38bc5ecc4 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 5.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_06875 ef3cf08527183a48deb97af38bc5ecc4 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 5.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMS64_06875 ef3cf08527183a48deb97af38bc5ecc4 266 Pfam PF12833 Helix-turn-helix domain 180 254 1.1E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMS64_06895 b6bcf18492095c41d81b891c6dd38cda 470 Gene3D G3DSA:3.40.190.10 116 254 1.4E-77 T 11-10-2018 AMS64_06895 b6bcf18492095c41d81b891c6dd38cda 470 Pfam PF16868 NMT1-like family 29 308 1.7E-66 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AMS64_06895 b6bcf18492095c41d81b891c6dd38cda 470 Gene3D G3DSA:3.40.190.10 29 308 1.4E-77 T 11-10-2018 AMS64_06895 b6bcf18492095c41d81b891c6dd38cda 470 SUPERFAMILY SSF53850 25 309 2.79E-60 T 11-10-2018 AMS64_06895 b6bcf18492095c41d81b891c6dd38cda 470 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 24 308 3.8E-65 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AMS64_05345 b50e1ef26578b22bd25d48e753bd02b9 273 Pfam PF07885 Ion channel 155 232 2.2E-16 T 11-10-2018 IPR013099 Potassium channel domain AMS64_05345 b50e1ef26578b22bd25d48e753bd02b9 273 PRINTS PR00169 Potassium channel signature 206 232 4.0E-7 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AMS64_05345 b50e1ef26578b22bd25d48e753bd02b9 273 PRINTS PR00169 Potassium channel signature 118 144 4.0E-7 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AMS64_05345 b50e1ef26578b22bd25d48e753bd02b9 273 PRINTS PR00169 Potassium channel signature 177 199 4.0E-7 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AMS64_05345 b50e1ef26578b22bd25d48e753bd02b9 273 Gene3D G3DSA:1.20.120.350 28 144 4.7E-15 T 11-10-2018 IPR027359 Voltage-dependent channel domain superfamily AMS64_05345 b50e1ef26578b22bd25d48e753bd02b9 273 SUPERFAMILY SSF81324 32 236 2.49E-36 T 11-10-2018 AMS64_05345 b50e1ef26578b22bd25d48e753bd02b9 273 Gene3D G3DSA:1.10.287.70 145 247 4.8E-25 T 11-10-2018 AMS64_05405 94bdecd02f109640d454ee05f808653d 163 SUPERFAMILY SSF55729 2 151 8.15E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_05405 94bdecd02f109640d454ee05f808653d 163 Gene3D G3DSA:3.40.630.30 1 147 4.2E-28 T 11-10-2018 AMS64_05405 94bdecd02f109640d454ee05f808653d 163 Pfam PF00583 Acetyltransferase (GNAT) family 56 139 4.7E-8 T 11-10-2018 IPR000182 GNAT domain AMS64_12450 fb6f41be130ed86cff13a37b0f4e2184 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 2.5E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMS64_12450 fb6f41be130ed86cff13a37b0f4e2184 120 SUPERFAMILY SSF54593 6 118 2.61E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_12450 fb6f41be130ed86cff13a37b0f4e2184 120 Gene3D G3DSA:3.10.180.10 1 118 2.3E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_02270 d76d60ff3333bbf32ff70b0f710dd8bb 131 Gene3D G3DSA:3.10.129.10 2 129 7.0E-34 T 11-10-2018 AMS64_02270 d76d60ff3333bbf32ff70b0f710dd8bb 131 Pfam PF13279 Thioesterase-like superfamily 9 117 3.6E-11 T 11-10-2018 AMS64_02270 d76d60ff3333bbf32ff70b0f710dd8bb 131 SUPERFAMILY SSF54637 3 128 4.37E-35 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_13525 d66f66027f9df77a9c63670a7a534017 191 Gene3D G3DSA:2.30.130.40 3 112 2.4E-25 T 11-10-2018 AMS64_13525 d66f66027f9df77a9c63670a7a534017 191 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 6 177 3.3E-13 T 11-10-2018 IPR003111 Lon, substrate-binding domain AMS64_13525 d66f66027f9df77a9c63670a7a534017 191 SMART SM00464 5 187 2.8E-4 T 11-10-2018 IPR003111 Lon, substrate-binding domain AMS64_13525 d66f66027f9df77a9c63670a7a534017 191 Gene3D G3DSA:1.10.4060.10 113 190 6.3E-6 T 11-10-2018 AMS64_13525 d66f66027f9df77a9c63670a7a534017 191 SUPERFAMILY SSF88697 6 189 6.21E-47 T 11-10-2018 IPR015947 PUA-like superfamily AMS64_21445 8e9e6cafeaef6e5934608776cae87af8 307 SUPERFAMILY SSF53686 13 302 1.12E-58 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMS64_21445 8e9e6cafeaef6e5934608776cae87af8 307 Gene3D G3DSA:3.40.50.1100 49 150 2.9E-63 T 11-10-2018 AMS64_21445 8e9e6cafeaef6e5934608776cae87af8 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 13 293 3.4E-21 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMS64_21445 8e9e6cafeaef6e5934608776cae87af8 307 Gene3D G3DSA:3.40.50.1100 16 298 2.9E-63 T 11-10-2018 AMS64_21445 8e9e6cafeaef6e5934608776cae87af8 307 PIRSF PIRSF006278 10 307 3.6E-77 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AMS64_01555 db7c2ff24253fa73b6ae14344160cb57 188 SMART SM00464 2 182 5.6E-4 T 11-10-2018 IPR003111 Lon, substrate-binding domain AMS64_01555 db7c2ff24253fa73b6ae14344160cb57 188 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 132 1.4E-13 T 11-10-2018 IPR003111 Lon, substrate-binding domain AMS64_01555 db7c2ff24253fa73b6ae14344160cb57 188 SUPERFAMILY SSF88697 1 180 1.32E-47 T 11-10-2018 IPR015947 PUA-like superfamily AMS64_01555 db7c2ff24253fa73b6ae14344160cb57 188 Gene3D G3DSA:2.30.130.40 1 107 1.8E-24 T 11-10-2018 AMS64_01555 db7c2ff24253fa73b6ae14344160cb57 188 Gene3D G3DSA:1.10.4060.10 110 187 6.8E-8 T 11-10-2018 AMS64_19100 7535ca66d016b88be3533ec6708bbdeb 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 3.1E-34 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_19100 7535ca66d016b88be3533ec6708bbdeb 341 Gene3D G3DSA:1.10.3720.10 103 331 1.4E-17 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_19100 7535ca66d016b88be3533ec6708bbdeb 341 SUPERFAMILY SSF161098 106 326 2.75E-14 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_16945 5e5b8a6428c9b7039cf625fe80133813 122 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 122 5.5E-48 T 11-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 AMS64_16945 5e5b8a6428c9b7039cf625fe80133813 122 Gene3D G3DSA:3.40.30.10 1 109 3.5E-43 T 11-10-2018 AMS64_20265 da5460414883e70fae879e6794a93d92 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 6.8E-69 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMS64_20265 da5460414883e70fae879e6794a93d92 249 Gene3D G3DSA:3.40.1280.10 1 160 1.1E-68 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMS64_20265 da5460414883e70fae879e6794a93d92 249 Gene3D G3DSA:1.10.1270.20 161 249 4.0E-33 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMS64_20265 da5460414883e70fae879e6794a93d92 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 119.078 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMS64_20265 da5460414883e70fae879e6794a93d92 249 SUPERFAMILY SSF75217 1 244 7.85E-102 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMS64_20265 da5460414883e70fae879e6794a93d92 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 9.8E-109 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMS64_20265 da5460414883e70fae879e6794a93d92 249 PIRSF PIRSF000386 1 247 3.7E-102 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMS64_01295 2d8ac5eb90e2268fda24f9a00e352ee7 216 PIRSF PIRSF006320 1 216 6.2E-107 T 11-10-2018 IPR026041 Glyoxalase ElbB AMS64_01295 2d8ac5eb90e2268fda24f9a00e352ee7 216 SUPERFAMILY SSF52317 1 213 4.59E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_01295 2d8ac5eb90e2268fda24f9a00e352ee7 216 Gene3D G3DSA:3.40.50.880 1 216 1.6E-86 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_04280 5fc0eeed44169baa5db52f1d05a46a23 190 Gene3D G3DSA:2.60.120.10 11 137 1.3E-16 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_04280 5fc0eeed44169baa5db52f1d05a46a23 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 113 7.4E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMS64_04280 5fc0eeed44169baa5db52f1d05a46a23 190 SUPERFAMILY SSF51206 16 129 3.67E-16 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMS64_07865 552c14897a9b0af00af129f12d2b399e 495 Gene3D G3DSA:3.60.10.10 92 365 1.6E-12 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMS64_07865 552c14897a9b0af00af129f12d2b399e 495 SUPERFAMILY SSF56219 76 366 1.57E-15 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMS64_19020 3e9c21feede9ef45801f4d0c24756bfd 475 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 393 410 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMS64_19020 3e9c21feede9ef45801f4d0c24756bfd 475 Pfam PF02378 Phosphotransferase system, EIIC 20 294 7.3E-37 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMS64_19020 3e9c21feede9ef45801f4d0c24756bfd 475 Pfam PF00367 phosphotransferase system, EIIB 383 415 2.7E-7 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMS64_19020 3e9c21feede9ef45801f4d0c24756bfd 475 Gene3D G3DSA:3.30.1360.60 377 456 9.0E-12 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AMS64_19020 3e9c21feede9ef45801f4d0c24756bfd 475 SUPERFAMILY SSF55604 381 450 3.53E-12 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 Gene3D G3DSA:3.30.540.10 4 198 1.9E-75 T 11-10-2018 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 42.572 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 Gene3D G3DSA:3.40.190.80 200 337 6.0E-60 T 11-10-2018 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 SUPERFAMILY SSF56655 2 331 4.09E-116 T 11-10-2018 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 197 7.8E-75 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 11-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 1.1E-76 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 1.1E-76 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 1.1E-76 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 1.1E-76 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 1.1E-76 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 1.1E-76 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 PIRSF PIRSF500210 1 336 2.6E-128 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMS64_10895 7bfcd0256cac8077e4616c3f70672c37 344 PIRSF PIRSF000904 1 337 1.6E-125 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMS64_16370 a5b27c1ca2a3d37ab58ed0cd9b866eaf 251 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMS64_16370 a5b27c1ca2a3d37ab58ed0cd9b866eaf 251 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 4 251 6.0E-120 T 11-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 AMS64_16370 a5b27c1ca2a3d37ab58ed0cd9b866eaf 251 Pfam PF01048 Phosphorylase superfamily 19 226 2.9E-41 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMS64_16370 a5b27c1ca2a3d37ab58ed0cd9b866eaf 251 Gene3D G3DSA:3.40.50.1580 1 251 5.7E-81 T 11-10-2018 AMS64_16370 a5b27c1ca2a3d37ab58ed0cd9b866eaf 251 SUPERFAMILY SSF53167 4 247 4.71E-75 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMS64_20825 5783fb0e964847a95146d8cd19bffe52 462 SUPERFAMILY SSF81340 20 445 9.29E-107 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AMS64_20825 5783fb0e964847a95146d8cd19bffe52 462 PRINTS PR00762 Chloride channel signature 345 365 9.2E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AMS64_20825 5783fb0e964847a95146d8cd19bffe52 462 PRINTS PR00762 Chloride channel signature 380 396 9.2E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AMS64_20825 5783fb0e964847a95146d8cd19bffe52 462 PRINTS PR00762 Chloride channel signature 398 417 9.2E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AMS64_20825 5783fb0e964847a95146d8cd19bffe52 462 PRINTS PR00762 Chloride channel signature 176 195 9.2E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AMS64_20825 5783fb0e964847a95146d8cd19bffe52 462 PRINTS PR00762 Chloride channel signature 96 113 9.2E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AMS64_20825 5783fb0e964847a95146d8cd19bffe52 462 Gene3D G3DSA:1.10.3080.10 14 454 2.3E-132 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AMS64_20825 5783fb0e964847a95146d8cd19bffe52 462 Pfam PF00654 Voltage gated chloride channel 83 430 4.7E-91 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AMS64_17580 be16ffb0860bc22d4ac25da22575fe42 438 PIRSF PIRSF005348 3 438 6.5E-159 T 11-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AMS64_17580 be16ffb0860bc22d4ac25da22575fe42 438 Pfam PF03390 2-hydroxycarboxylate transporter family 22 431 6.3E-145 T 11-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AMS64_10595 927eaee44f64f4d5bc957ded006a9799 215 Gene3D G3DSA:1.10.8.890 110 133 1.1E-13 T 11-10-2018 AMS64_10595 927eaee44f64f4d5bc957ded006a9799 215 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 6 190 8.8E-23 T 11-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 AMS64_10595 927eaee44f64f4d5bc957ded006a9799 215 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 10 189 2.1E-21 T 11-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 AMS64_10595 927eaee44f64f4d5bc957ded006a9799 215 Gene3D G3DSA:3.30.70.2540 6 189 1.1E-13 T 11-10-2018 AMS64_16060 b192787d5bfbadacac52f1a9fd1da055 360 Gene3D G3DSA:1.10.530.10 102 355 4.0E-118 T 11-10-2018 AMS64_16060 b192787d5bfbadacac52f1a9fd1da055 360 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 65 355 6.5E-118 T 11-10-2018 IPR011757 Lytic transglycosylase MltB AMS64_16060 b192787d5bfbadacac52f1a9fd1da055 360 Pfam PF13406 Transglycosylase SLT domain 60 353 4.6E-96 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 AMS64_16060 b192787d5bfbadacac52f1a9fd1da055 360 Gene3D G3DSA:1.10.8.350 63 236 4.0E-118 T 11-10-2018 AMS64_16060 b192787d5bfbadacac52f1a9fd1da055 360 SUPERFAMILY SSF53955 55 355 3.37E-95 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_06035 984a7c35eb4ba30bc2cb5f46d503eded 69 Gene3D G3DSA:2.30.30.100 17 69 7.4E-24 T 11-10-2018 AMS64_06035 984a7c35eb4ba30bc2cb5f46d503eded 69 SUPERFAMILY SSF50182 18 68 3.38E-17 T 11-10-2018 IPR010920 LSM domain superfamily AMS64_06035 984a7c35eb4ba30bc2cb5f46d503eded 69 Pfam PF06004 Bacterial protein of unknown function (DUF903) 20 68 7.5E-22 T 11-10-2018 IPR010305 Protein of unknown function DUF903 AMS64_00835 28ad050e5c837e0a731e2ffe8cc2eceb 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 4.0E-57 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMS64_09745 6fdf41029213abb7a94d1168d77e8561 507 SUPERFAMILY SSF46689 3 111 1.04E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_09745 6fdf41029213abb7a94d1168d77e8561 507 Gene3D G3DSA:3.30.420.10 127 294 1.1E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_09745 6fdf41029213abb7a94d1168d77e8561 507 SUPERFAMILY SSF53098 127 285 4.4E-14 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_17715 d9bc02d8ff0c1b80f023e277733aa722 292 Pfam PF12146 Serine aminopeptidase, S33 82 189 8.4E-13 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AMS64_17715 d9bc02d8ff0c1b80f023e277733aa722 292 Gene3D G3DSA:3.40.50.1820 64 279 3.3E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_17715 d9bc02d8ff0c1b80f023e277733aa722 292 SUPERFAMILY SSF53474 35 269 6.43E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_02680 0771d02d1fe3cb327f40070ba6f9b31d 349 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 23 344 6.4E-97 T 11-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AMS64_13420 26d72141577b463c10030749b7a09232 97 Pfam PF06291 Bor protein 20 95 1.6E-19 T 11-10-2018 IPR010438 Bor GO:0009279 AMS64_13420 26d72141577b463c10030749b7a09232 97 ProDom PD020173 BOR LIPOPROTEIN PLASMID ISS HOMOLOG MEMBRANE FROM PRECURSOR PALMITATE DLP12 1 96 3.0E-18 T 11-10-2018 IPR010438 Bor GO:0009279 AMS64_17110 d79bd67885cfcba934c3df5ba70ee986 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.756 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AMS64_17110 d79bd67885cfcba934c3df5ba70ee986 303 Pfam PF04381 Putative exonuclease, RdgC 1 299 1.8E-128 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AMS64_01875 ef0d8e91f3d4da8ae2e9077e8b96248c 450 SUPERFAMILY SSF51261 269 447 3.77E-44 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_01875 ef0d8e91f3d4da8ae2e9077e8b96248c 450 Pfam PF01551 Peptidase family M23 350 443 3.6E-26 T 11-10-2018 IPR016047 Peptidase M23 AMS64_01875 ef0d8e91f3d4da8ae2e9077e8b96248c 450 Gene3D G3DSA:2.70.70.10 315 448 2.2E-36 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_17805 012a79ef4ff859a68ee9d87ee0bafdfc 470 Pfam PF01554 MatE 22 185 2.3E-23 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_17805 012a79ef4ff859a68ee9d87ee0bafdfc 470 Pfam PF01554 MatE 246 408 1.8E-12 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_17805 012a79ef4ff859a68ee9d87ee0bafdfc 470 PIRSF PIRSF006603 1 454 1.1E-50 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 Gene3D G3DSA:1.10.246.130 283 407 2.7E-32 T 11-10-2018 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 SUPERFAMILY SSF56235 47 592 2.12E-157 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 Pfam PF01019 Gamma-glutamyltranspeptidase 68 588 1.1E-145 T 11-10-2018 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 Gene3D G3DSA:3.60.20.40 408 592 2.4E-57 T 11-10-2018 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 54 585 7.6E-109 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 282 1.3E-65 T 11-10-2018 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 165 184 1.3E-65 T 11-10-2018 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 411 429 1.3E-65 T 11-10-2018 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 496 513 1.3E-65 T 11-10-2018 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 165 1.3E-65 T 11-10-2018 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 296 315 1.3E-65 T 11-10-2018 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 470 485 1.3E-65 T 11-10-2018 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 433 451 1.3E-65 T 11-10-2018 AMS64_17105 bcd69a90c6cfa000804615e7e7b5ece3 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 75 100 1.3E-65 T 11-10-2018 AMS64_12605 978d8824c9b68a0ea0357dc5eb5529f8 210 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 194 3.1E-64 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AMS64_12605 978d8824c9b68a0ea0357dc5eb5529f8 210 PIRSF PIRSF006091 1 205 5.0E-77 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AMS64_12605 978d8824c9b68a0ea0357dc5eb5529f8 210 SMART SM00900 101 193 2.5E-37 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMS64_12605 978d8824c9b68a0ea0357dc5eb5529f8 210 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 195 25.908 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AMS64_12605 978d8824c9b68a0ea0357dc5eb5529f8 210 Pfam PF04205 FMN-binding domain 101 190 3.9E-21 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMS64_04995 7ffa2bc952c4a474bcc5650735a9b4da 198 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 118 186 1.4E-10 T 11-10-2018 IPR018660 C-type lysozyme inhibitor AMS64_04995 7ffa2bc952c4a474bcc5650735a9b4da 198 Pfam PF07007 Lysozyme inhibitor LprI 25 83 8.1E-5 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal AMS64_04995 7ffa2bc952c4a474bcc5650735a9b4da 198 Gene3D G3DSA:2.40.128.200 113 194 2.9E-15 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily AMS64_04995 7ffa2bc952c4a474bcc5650735a9b4da 198 SUPERFAMILY SSF141488 115 192 1.18E-14 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily AMS64_16130 cc10e7a0139eba246be0de969e8f3ad8 404 Gene3D G3DSA:3.30.420.40 207 375 1.1E-92 T 11-10-2018 AMS64_16130 cc10e7a0139eba246be0de969e8f3ad8 404 Gene3D G3DSA:3.30.420.40 90 384 1.1E-92 T 11-10-2018 AMS64_16130 cc10e7a0139eba246be0de969e8f3ad8 404 SUPERFAMILY SSF53067 85 391 8.82E-55 T 11-10-2018 AMS64_16130 cc10e7a0139eba246be0de969e8f3ad8 404 Pfam PF00480 ROK family 89 389 1.1E-71 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMS64_16130 cc10e7a0139eba246be0de969e8f3ad8 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMS64_16130 cc10e7a0139eba246be0de969e8f3ad8 404 Gene3D G3DSA:1.10.10.10 2 78 2.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_16130 cc10e7a0139eba246be0de969e8f3ad8 404 SUPERFAMILY SSF46785 11 75 1.62E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_14955 b45cda68cfc50ced7680d79308bbd2b7 507 Gene3D G3DSA:3.40.50.150 184 465 6.2E-87 T 11-10-2018 AMS64_14955 b45cda68cfc50ced7680d79308bbd2b7 507 SUPERFAMILY SSF53335 9 506 1.52E-138 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_14955 b45cda68cfc50ced7680d79308bbd2b7 507 Pfam PF12161 HsdM N-terminal domain 11 148 1.4E-21 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AMS64_14955 b45cda68cfc50ced7680d79308bbd2b7 507 Gene3D G3DSA:1.20.1260.30 2 180 5.2E-36 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AMS64_14955 b45cda68cfc50ced7680d79308bbd2b7 507 Pfam PF02384 N-6 DNA Methylase 164 470 1.4E-106 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AMS64_14955 b45cda68cfc50ced7680d79308bbd2b7 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 202 4.3E-14 T 11-10-2018 AMS64_14955 b45cda68cfc50ced7680d79308bbd2b7 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 287 299 4.3E-14 T 11-10-2018 AMS64_14955 b45cda68cfc50ced7680d79308bbd2b7 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 224 4.3E-14 T 11-10-2018 AMS64_14955 b45cda68cfc50ced7680d79308bbd2b7 507 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 486 1.9E-83 T 11-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 AMS64_06525 b8d720c95680ad087c10ab7bb081c037 445 PIRSF PIRSF006603 1 441 6.6E-53 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_06525 b8d720c95680ad087c10ab7bb081c037 445 Pfam PF01554 MatE 265 393 1.3E-10 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_06525 b8d720c95680ad087c10ab7bb081c037 445 Pfam PF01554 MatE 21 182 5.9E-24 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_08580 534d9f3c8290aa11ba2029eb22a43105 548 Gene3D G3DSA:3.90.780.10 337 542 1.0E-37 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_08580 534d9f3c8290aa11ba2029eb22a43105 548 Pfam PF02872 5'-nucleotidase, C-terminal domain 358 509 1.6E-25 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_08580 534d9f3c8290aa11ba2029eb22a43105 548 PRINTS PR01607 Apyrase family signature 483 502 8.9E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_08580 534d9f3c8290aa11ba2029eb22a43105 548 PRINTS PR01607 Apyrase family signature 219 242 8.9E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_08580 534d9f3c8290aa11ba2029eb22a43105 548 PRINTS PR01607 Apyrase family signature 3 21 8.9E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_08580 534d9f3c8290aa11ba2029eb22a43105 548 PRINTS PR01607 Apyrase family signature 200 217 8.9E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_08580 534d9f3c8290aa11ba2029eb22a43105 548 PRINTS PR01607 Apyrase family signature 259 279 8.9E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_08580 534d9f3c8290aa11ba2029eb22a43105 548 Gene3D G3DSA:3.60.21.10 1 334 2.7E-73 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMS64_08580 534d9f3c8290aa11ba2029eb22a43105 548 Pfam PF00149 Calcineurin-like phosphoesterase 7 236 4.3E-9 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMS64_08580 534d9f3c8290aa11ba2029eb22a43105 548 SUPERFAMILY SSF56300 3 333 5.7E-68 T 11-10-2018 AMS64_08580 534d9f3c8290aa11ba2029eb22a43105 548 SUPERFAMILY SSF55816 337 539 2.09E-38 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_08580 534d9f3c8290aa11ba2029eb22a43105 548 ProSitePatterns PS00786 5'-nucleotidase signature 2. 92 103 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMS64_04415 272289b8f3f62d7a9824fc7689a359ae 367 SUPERFAMILY SSF109604 151 363 3.77E-29 T 11-10-2018 AMS64_04415 272289b8f3f62d7a9824fc7689a359ae 367 Gene3D G3DSA:1.10.3210.10 169 322 3.6E-20 T 11-10-2018 AMS64_04415 272289b8f3f62d7a9824fc7689a359ae 367 Pfam PF08668 HDOD domain 174 291 7.4E-15 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AMS64_16690 27976b2173a0b29add3ef85f34f9f2aa 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 179 1.1E-81 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMS64_16690 27976b2173a0b29add3ef85f34f9f2aa 182 Gene3D G3DSA:2.60.120.10 1 182 1.2E-74 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMS64_16690 27976b2173a0b29add3ef85f34f9f2aa 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 177 3.5E-76 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMS64_16690 27976b2173a0b29add3ef85f34f9f2aa 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 178 1.0E-76 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMS64_16690 27976b2173a0b29add3ef85f34f9f2aa 182 SUPERFAMILY SSF51182 1 180 8.9E-81 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMS64_13945 516fb4927492552a6b21cbe6aeee21c2 403 Gene3D G3DSA:3.30.470.20 109 401 1.1E-32 T 11-10-2018 AMS64_13945 516fb4927492552a6b21cbe6aeee21c2 403 SUPERFAMILY SSF56059 96 319 5.95E-28 T 11-10-2018 AMS64_16480 390ca6711b2ada22a67b0f5733904e2f 454 SUPERFAMILY SSF55604 6 81 3.79E-21 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AMS64_16480 390ca6711b2ada22a67b0f5733904e2f 454 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMS64_16480 390ca6711b2ada22a67b0f5733904e2f 454 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 4 448 6.6E-194 T 11-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 AMS64_16480 390ca6711b2ada22a67b0f5733904e2f 454 Pfam PF00367 phosphotransferase system, EIIB 9 41 5.8E-15 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMS64_16480 390ca6711b2ada22a67b0f5733904e2f 454 Pfam PF02378 Phosphotransferase system, EIIC 110 395 1.0E-50 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMS64_16480 390ca6711b2ada22a67b0f5733904e2f 454 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 6.3E-20 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMS64_16480 390ca6711b2ada22a67b0f5733904e2f 454 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 437 9.8E-92 T 11-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AMS64_16480 390ca6711b2ada22a67b0f5733904e2f 454 Gene3D G3DSA:3.30.1360.60 1 77 2.8E-26 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AMS64_04125 d1a3120797fa0ee6dfc40ccfe672856f 195 SUPERFAMILY SSF52141 4 191 7.19E-58 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMS64_04125 d1a3120797fa0ee6dfc40ccfe672856f 195 SMART SM00987 28 185 4.2E-32 T 11-10-2018 AMS64_04125 d1a3120797fa0ee6dfc40ccfe672856f 195 Pfam PF03167 Uracil DNA glycosylase superfamily 31 184 1.3E-23 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMS64_04125 d1a3120797fa0ee6dfc40ccfe672856f 195 SMART SM00986 28 185 4.2E-32 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMS64_04125 d1a3120797fa0ee6dfc40ccfe672856f 195 Gene3D G3DSA:3.40.470.10 1 193 4.1E-71 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMS64_15735 639e5aab246ae11ffdc7e4ba0f26cf62 171 PIRSF PIRSF028103 1 169 2.4E-40 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AMS64_15735 639e5aab246ae11ffdc7e4ba0f26cf62 171 SUPERFAMILY SSF55021 2 67 2.86E-11 T 11-10-2018 AMS64_15735 639e5aab246ae11ffdc7e4ba0f26cf62 171 Pfam PF13740 ACT domain 4 65 4.6E-12 T 11-10-2018 AMS64_15735 639e5aab246ae11ffdc7e4ba0f26cf62 171 SUPERFAMILY SSF55021 85 163 7.25E-13 T 11-10-2018 AMS64_15735 639e5aab246ae11ffdc7e4ba0f26cf62 171 Gene3D G3DSA:3.30.70.260 2 76 4.2E-17 T 11-10-2018 AMS64_15735 639e5aab246ae11ffdc7e4ba0f26cf62 171 Gene3D G3DSA:3.30.70.260 82 166 6.6E-20 T 11-10-2018 AMS64_22380 bfc42a9a9ca79c16af4ef4b4664fcc3f 192 Pfam PF13511 Domain of unknown function (DUF4124) 12 56 7.2E-14 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 AMS64_13575 c72c0a566e8f43cdd22e42e7f06e9547 144 SUPERFAMILY SSF55961 1 143 4.18E-34 T 11-10-2018 AMS64_13575 c72c0a566e8f43cdd22e42e7f06e9547 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 13 134 1.1E-31 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AMS64_13575 c72c0a566e8f43cdd22e42e7f06e9547 144 Gene3D G3DSA:3.30.530.20 2 144 7.2E-38 T 11-10-2018 IPR023393 START-like domain superfamily AMS64_09200 8dc67f24d080ee2441b6967a01c31f88 214 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 3.5E-42 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AMS64_09200 8dc67f24d080ee2441b6967a01c31f88 214 Hamap MF_00551 Uridine kinase [udk]. 5 213 39.534 T 11-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AMS64_09200 8dc67f24d080ee2441b6967a01c31f88 214 SUPERFAMILY SSF52540 9 205 7.83E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09200 8dc67f24d080ee2441b6967a01c31f88 214 Gene3D G3DSA:3.40.50.300 4 213 2.1E-59 T 11-10-2018 AMS64_09200 8dc67f24d080ee2441b6967a01c31f88 214 TIGRFAM TIGR00235 udk: uridine kinase 5 212 5.0E-88 T 11-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 AMS64_09200 8dc67f24d080ee2441b6967a01c31f88 214 PRINTS PR00988 Uridine kinase signature 179 192 6.9E-36 T 11-10-2018 AMS64_09200 8dc67f24d080ee2441b6967a01c31f88 214 PRINTS PR00988 Uridine kinase signature 157 168 6.9E-36 T 11-10-2018 AMS64_09200 8dc67f24d080ee2441b6967a01c31f88 214 PRINTS PR00988 Uridine kinase signature 87 102 6.9E-36 T 11-10-2018 AMS64_09200 8dc67f24d080ee2441b6967a01c31f88 214 PRINTS PR00988 Uridine kinase signature 143 153 6.9E-36 T 11-10-2018 AMS64_09200 8dc67f24d080ee2441b6967a01c31f88 214 PRINTS PR00988 Uridine kinase signature 42 53 6.9E-36 T 11-10-2018 AMS64_09200 8dc67f24d080ee2441b6967a01c31f88 214 PRINTS PR00988 Uridine kinase signature 8 25 6.9E-36 T 11-10-2018 AMS64_13290 aeb454725e52315ebb999c26190056c9 429 Pfam PF03313 Serine dehydratase alpha chain 143 424 2.0E-48 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AMS64_13290 aeb454725e52315ebb999c26190056c9 429 PIRSF PIRSF006054 1 429 8.9E-172 T 11-10-2018 IPR021144 Uncharacterised protein family UPF0597 AMS64_13290 aeb454725e52315ebb999c26190056c9 429 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 4 429 33.773 T 11-10-2018 IPR021144 Uncharacterised protein family UPF0597 AMS64_18020 a4f525d6e73e649a0a14316cc2734f0e 258 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.494 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMS64_18020 a4f525d6e73e649a0a14316cc2734f0e 258 SUPERFAMILY SSF64005 13 238 6.93E-85 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AMS64_18020 a4f525d6e73e649a0a14316cc2734f0e 258 Gene3D G3DSA:3.40.1180.10 5 243 7.3E-92 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AMS64_18020 a4f525d6e73e649a0a14316cc2734f0e 258 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 242 5.5E-97 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMS64_18020 a4f525d6e73e649a0a14316cc2734f0e 258 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 AMS64_18020 a4f525d6e73e649a0a14316cc2734f0e 258 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 1.2E-78 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMS64_22410 beb71d6e9d96b637ff016a76f65833b3 173 SUPERFAMILY SSF54862 22 166 2.85E-19 T 11-10-2018 AMS64_22410 beb71d6e9d96b637ff016a76f65833b3 173 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_22410 beb71d6e9d96b637ff016a76f65833b3 173 Pfam PF12838 4Fe-4S dicluster domain 41 96 5.6E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_22410 beb71d6e9d96b637ff016a76f65833b3 173 Gene3D G3DSA:3.30.70.20 111 171 2.3E-10 T 11-10-2018 AMS64_22410 beb71d6e9d96b637ff016a76f65833b3 173 Gene3D G3DSA:3.30.70.20 32 110 3.4E-12 T 11-10-2018 AMS64_12055 079ef3a756386250d14d2623eee3bc75 186 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 8 182 4.3E-9 T 11-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component AMS64_12055 079ef3a756386250d14d2623eee3bc75 186 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 11 110 1.5E-4 T 11-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component AMS64_21805 4db5196f8cca74564e543b69afdc55cf 345 Gene3D G3DSA:3.30.43.10 1 72 1.5E-16 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMS64_21805 4db5196f8cca74564e543b69afdc55cf 345 Gene3D G3DSA:3.30.465.10 73 221 1.9E-56 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMS64_21805 4db5196f8cca74564e543b69afdc55cf 345 Gene3D G3DSA:3.90.78.10 222 344 7.6E-44 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_21805 4db5196f8cca74564e543b69afdc55cf 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 86.935 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_21805 4db5196f8cca74564e543b69afdc55cf 345 SUPERFAMILY SSF56176 9 199 2.76E-45 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMS64_21805 4db5196f8cca74564e543b69afdc55cf 345 SUPERFAMILY SSF56194 206 343 4.05E-50 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_21805 4db5196f8cca74564e543b69afdc55cf 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 11 333 1.6E-87 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_21805 4db5196f8cca74564e543b69afdc55cf 345 Pfam PF01565 FAD binding domain 25 153 4.5E-20 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMS64_21805 4db5196f8cca74564e543b69afdc55cf 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 331 4.7E-33 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMS64_18615 bd48c01a46502dbf640b6a6121b0bf36 110 Gene3D G3DSA:3.30.429.10 1 110 1.3E-31 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AMS64_18615 bd48c01a46502dbf640b6a6121b0bf36 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 1.4E-27 T 11-10-2018 IPR015017 Protein of unknown function DUF1904 AMS64_18615 bd48c01a46502dbf640b6a6121b0bf36 110 SUPERFAMILY SSF55331 1 110 2.09E-31 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AMS64_17670 50cd8e054b08a1f8e1e1298d38cf6213 254 Gene3D G3DSA:3.40.190.10 112 210 1.9E-30 T 11-10-2018 AMS64_17670 50cd8e054b08a1f8e1e1298d38cf6213 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 250 8.0E-27 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_17670 50cd8e054b08a1f8e1e1298d38cf6213 254 Gene3D G3DSA:3.40.190.10 32 250 1.9E-30 T 11-10-2018 AMS64_17670 50cd8e054b08a1f8e1e1298d38cf6213 254 SUPERFAMILY SSF53850 27 251 1.23E-40 T 11-10-2018 AMS64_17670 50cd8e054b08a1f8e1e1298d38cf6213 254 SMART SM00062 26 254 4.3E-7 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_10145 f0ed3ac55125baafc921f93348d388f6 371 Gene3D G3DSA:1.25.40.10 94 347 1.5E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_10145 f0ed3ac55125baafc921f93348d388f6 371 SUPERFAMILY SSF48452 184 321 7.59E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_10145 f0ed3ac55125baafc921f93348d388f6 371 SUPERFAMILY SSF48371 82 152 2.56E-5 T 11-10-2018 IPR016024 Armadillo-type fold AMS64_10090 01d89c74a333bf8b887019853be2d6d5 140 Gene3D G3DSA:3.10.580.10 1 130 2.0E-27 T 11-10-2018 AMS64_10090 01d89c74a333bf8b887019853be2d6d5 140 SMART SM00116 80 127 2.1 T 11-10-2018 IPR000644 CBS domain AMS64_10090 01d89c74a333bf8b887019853be2d6d5 140 SMART SM00116 13 61 1.0 T 11-10-2018 IPR000644 CBS domain AMS64_10090 01d89c74a333bf8b887019853be2d6d5 140 SUPERFAMILY SSF54631 1 126 1.11E-29 T 11-10-2018 AMS64_10090 01d89c74a333bf8b887019853be2d6d5 140 Pfam PF00571 CBS domain 73 127 7.0E-10 T 11-10-2018 IPR000644 CBS domain AMS64_10090 01d89c74a333bf8b887019853be2d6d5 140 Pfam PF00571 CBS domain 6 61 4.6E-7 T 11-10-2018 IPR000644 CBS domain AMS64_11725 5e41995f90ccfdb6e1e351304425478d 148 SMART SM00116 11 59 1.1E-8 T 11-10-2018 IPR000644 CBS domain AMS64_11725 5e41995f90ccfdb6e1e351304425478d 148 SMART SM00116 86 133 1.7E-7 T 11-10-2018 IPR000644 CBS domain AMS64_11725 5e41995f90ccfdb6e1e351304425478d 148 Pfam PF00571 CBS domain 81 130 7.1E-11 T 11-10-2018 IPR000644 CBS domain AMS64_11725 5e41995f90ccfdb6e1e351304425478d 148 Pfam PF00571 CBS domain 5 56 8.9E-14 T 11-10-2018 IPR000644 CBS domain AMS64_11725 5e41995f90ccfdb6e1e351304425478d 148 SUPERFAMILY SSF54631 1 135 3.82E-31 T 11-10-2018 AMS64_11725 5e41995f90ccfdb6e1e351304425478d 148 Gene3D G3DSA:3.10.580.10 1 147 2.4E-44 T 11-10-2018 AMS64_07385 89b1ff58328faa14fed50fb8462d0829 246 PIRSF PIRSF002884 20 246 4.8E-84 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AMS64_07385 89b1ff58328faa14fed50fb8462d0829 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 43 246 1.9E-78 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AMS64_07385 89b1ff58328faa14fed50fb8462d0829 246 Gene3D G3DSA:1.10.287.500 62 196 1.3E-46 T 11-10-2018 AMS64_07385 89b1ff58328faa14fed50fb8462d0829 246 SUPERFAMILY SSF75708 34 245 1.44E-67 T 11-10-2018 AMS64_00685 4d2266f767cf0c712c7ae490061aef00 202 Pfam PF02036 SCP-2 sterol transfer family 15 111 5.4E-18 T 11-10-2018 IPR003033 SCP2 sterol-binding domain AMS64_00685 4d2266f767cf0c712c7ae490061aef00 202 SUPERFAMILY SSF55718 13 118 1.1E-5 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMS64_11730 787e394072b2c9824538f981d13de21a 188 SUPERFAMILY SSF52833 5 187 5.43E-59 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_11730 787e394072b2c9824538f981d13de21a 188 Gene3D G3DSA:3.40.30.10 1 187 4.5E-65 T 11-10-2018 AMS64_11730 787e394072b2c9824538f981d13de21a 188 TIGRFAM TIGR03137 AhpC: peroxiredoxin 4 188 8.7E-106 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMS64_11730 787e394072b2c9824538f981d13de21a 188 Pfam PF00578 AhpC/TSA family 7 133 3.6E-37 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMS64_11730 787e394072b2c9824538f981d13de21a 188 PIRSF PIRSF000239 1 188 3.5E-55 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMS64_11730 787e394072b2c9824538f981d13de21a 188 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 157 182 1.8E-6 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMS64_09805 b5b11f123c91db326c0bd9bdc738b9c3 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 6.5E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMS64_09805 b5b11f123c91db326c0bd9bdc738b9c3 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AMS64_09805 b5b11f123c91db326c0bd9bdc738b9c3 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.126 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AMS64_09805 b5b11f123c91db326c0bd9bdc738b9c3 78 Gene3D G3DSA:1.10.1200.10 1 75 3.3E-29 T 11-10-2018 IPR036736 ACP-like superfamily AMS64_09805 b5b11f123c91db326c0bd9bdc738b9c3 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.9E-36 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AMS64_09805 b5b11f123c91db326c0bd9bdc738b9c3 78 SUPERFAMILY SSF47336 2 76 5.37E-23 T 11-10-2018 IPR036736 ACP-like superfamily AMS64_08735 cea7530c7372791cfb87e883a35ca54d 459 Pfam PF01554 MatE 17 176 2.4E-33 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_08735 cea7530c7372791cfb87e883a35ca54d 459 Pfam PF01554 MatE 243 403 8.5E-37 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_08735 cea7530c7372791cfb87e883a35ca54d 459 PIRSF PIRSF006603 6 451 3.6E-63 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_08735 cea7530c7372791cfb87e883a35ca54d 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 4.5E-111 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMS64_18855 a68e43c73617cc1d02d06cf1224092c8 296 Gene3D G3DSA:1.10.600.10 2 296 2.9E-101 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMS64_18855 a68e43c73617cc1d02d06cf1224092c8 296 SUPERFAMILY SSF48576 7 289 1.98E-88 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMS64_18855 a68e43c73617cc1d02d06cf1224092c8 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMS64_18855 a68e43c73617cc1d02d06cf1224092c8 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMS64_18855 a68e43c73617cc1d02d06cf1224092c8 296 Pfam PF00348 Polyprenyl synthetase 31 264 3.0E-59 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AMS64_01435 8c0690f12a866c0b89282b5249d50685 376 Gene3D G3DSA:3.40.190.10 132 263 1.6E-24 T 11-10-2018 AMS64_01435 8c0690f12a866c0b89282b5249d50685 376 Gene3D G3DSA:3.40.190.10 37 319 1.6E-24 T 11-10-2018 AMS64_01435 8c0690f12a866c0b89282b5249d50685 376 SUPERFAMILY SSF53850 23 355 4.85E-22 T 11-10-2018 AMS64_04165 0dd64c8e252f880e3a84ad077be23445 432 Gene3D G3DSA:3.30.1040.50 102 150 5.1E-9 T 11-10-2018 AMS64_04165 0dd64c8e252f880e3a84ad077be23445 432 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 1.7E-32 T 11-10-2018 IPR032244 LapD/MoxY, periplasmic domain AMS64_02430 61480af811560c3aa5c866c7a66fd621 107 Pfam PF10761 Protein of unknown function (DUF2590) 7 105 1.7E-39 T 11-10-2018 IPR019697 Bacteriophage HP1, Orf28 AMS64_18245 bfdede25f1abf1a53615dd971bf1e3fc 409 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 4 404 3.7E-192 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AMS64_18245 bfdede25f1abf1a53615dd971bf1e3fc 409 Pfam PF03116 NQR2, RnfD, RnfE family 41 401 2.1E-105 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AMS64_18245 bfdede25f1abf1a53615dd971bf1e3fc 409 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 408 36.664 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AMS64_18245 bfdede25f1abf1a53615dd971bf1e3fc 409 PIRSF PIRSF016055 1 409 8.9E-196 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AMS64_17980 d3040e3ca5521c4cf649f9b73b96de8d 257 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 254 1.2E-100 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AMS64_17980 d3040e3ca5521c4cf649f9b73b96de8d 257 PIRSF PIRSF000456 1 257 1.0E-103 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AMS64_17980 d3040e3ca5521c4cf649f9b73b96de8d 257 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 2.0E-27 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 AMS64_17980 d3040e3ca5521c4cf649f9b73b96de8d 257 SUPERFAMILY SSF51161 1 256 6.22E-82 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_17980 d3040e3ca5521c4cf649f9b73b96de8d 257 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 43.916 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AMS64_17980 d3040e3ca5521c4cf649f9b73b96de8d 257 Gene3D G3DSA:2.160.10.10 1 189 7.8E-57 T 11-10-2018 AMS64_17980 d3040e3ca5521c4cf649f9b73b96de8d 257 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 27 7.3E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_17980 d3040e3ca5521c4cf649f9b73b96de8d 257 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 30 56 5.8E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_17980 d3040e3ca5521c4cf649f9b73b96de8d 257 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 59 93 2.4E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_17980 d3040e3ca5521c4cf649f9b73b96de8d 257 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 3.2E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_17980 d3040e3ca5521c4cf649f9b73b96de8d 257 Gene3D G3DSA:1.20.1180.10 191 256 1.4E-23 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 AMS64_12185 6cbddfc0f3d8722c6dbc08ce0151676f 196 Pfam PF16473 3' exoribonuclease, RNase T-like 9 183 6.4E-30 T 11-10-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain AMS64_12185 6cbddfc0f3d8722c6dbc08ce0151676f 196 SUPERFAMILY SSF53098 7 187 9.28E-14 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_12185 6cbddfc0f3d8722c6dbc08ce0151676f 196 Gene3D G3DSA:3.30.420.10 2 192 8.6E-9 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_08820 f2fc8eb25cc7b6dfe7b948b7d2c32b6b 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 9 103 4.0E-18 T 11-10-2018 IPR007376 dsDNA mimic, putative AMS64_08820 f2fc8eb25cc7b6dfe7b948b7d2c32b6b 106 Pfam PF04269 Protein of unknown function, DUF440 7 103 4.1E-38 T 11-10-2018 IPR007376 dsDNA mimic, putative AMS64_08820 f2fc8eb25cc7b6dfe7b948b7d2c32b6b 106 SUPERFAMILY SSF102816 7 103 1.57E-26 T 11-10-2018 IPR036763 Putative dsDNA mimic superfamily AMS64_08820 f2fc8eb25cc7b6dfe7b948b7d2c32b6b 106 PIRSF PIRSF004916 1 105 1.2E-26 T 11-10-2018 IPR007376 dsDNA mimic, putative AMS64_08820 f2fc8eb25cc7b6dfe7b948b7d2c32b6b 106 Gene3D G3DSA:3.10.450.140 7 104 3.1E-32 T 11-10-2018 IPR036763 Putative dsDNA mimic superfamily AMS64_21840 81209d7157fb841ac11ee0eb17b68954 165 Pfam PF00072 Response regulator receiver domain 7 127 1.6E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_21840 81209d7157fb841ac11ee0eb17b68954 165 Gene3D G3DSA:3.40.50.2300 5 146 6.9E-18 T 11-10-2018 AMS64_21840 81209d7157fb841ac11ee0eb17b68954 165 SUPERFAMILY SSF52172 5 137 2.28E-18 T 11-10-2018 IPR011006 CheY-like superfamily AMS64_21840 81209d7157fb841ac11ee0eb17b68954 165 SMART SM00448 5 126 1.6E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMS64_14430 d5da384a2384a3774897f037003870e9 205 Gene3D G3DSA:3.10.310.50 84 200 1.1E-27 T 11-10-2018 AMS64_14430 d5da384a2384a3774897f037003870e9 205 Pfam PF04536 TPM domain 109 180 2.2E-8 T 11-10-2018 IPR007621 TPM domain AMS64_15180 bfd631d938f16a04b634a1c0a93fcfac 598 Pfam PF08439 Oligopeptidase F 115 179 3.8E-6 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain AMS64_15180 bfd631d938f16a04b634a1c0a93fcfac 598 SUPERFAMILY SSF55486 3 584 1.14E-80 T 11-10-2018 AMS64_15180 bfd631d938f16a04b634a1c0a93fcfac 598 Pfam PF01432 Peptidase family M3 196 578 4.6E-19 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AMS64_15180 bfd631d938f16a04b634a1c0a93fcfac 598 Gene3D G3DSA:1.10.1370.30 23 596 1.6E-102 T 11-10-2018 AMS64_02220 70ac336b535fa48cb3f3f07d25cb43bc 258 Gene3D G3DSA:1.10.3720.10 10 255 1.4E-36 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_02220 70ac336b535fa48cb3f3f07d25cb43bc 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 256 4.3E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_02220 70ac336b535fa48cb3f3f07d25cb43bc 258 SUPERFAMILY SSF161098 12 257 7.38E-41 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_20840 097dd7b9c4a870cc10cb2d77e81a91f6 300 Pfam PF01925 Sulfite exporter TauE/SafE 13 146 4.7E-8 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 7.0E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 7.0E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 7.0E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 7.0E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 7.0E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 7.0E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 7.0E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 7.0E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 7.0E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.602 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 PIRSF PIRSF000724 1 387 2.6E-133 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 Pfam PF00162 Phosphoglycerate kinase 6 373 4.8E-138 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 SUPERFAMILY SSF53748 3 383 4.71E-144 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 Gene3D G3DSA:3.40.50.1260 10 379 8.2E-153 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_05380 445ce5bbae15e8631c34da627c26ec7a 387 Gene3D G3DSA:3.40.50.1260 165 373 8.2E-153 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 Pfam PF00691 OmpA family 169 265 2.3E-18 T 11-10-2018 IPR006665 OmpA-like domain AMS64_12625 41051f5a590cf967a093e41c7586187b 277 Gene3D G3DSA:3.30.1330.60 159 276 6.9E-33 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_12625 41051f5a590cf967a093e41c7586187b 277 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 87 104 1.8E-71 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 254 274 1.8E-71 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 46 1.8E-71 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 187 213 1.8E-71 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 11 27 1.8E-71 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 68 86 1.8E-71 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 49 67 1.8E-71 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 216 233 1.8E-71 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 253 1.8E-71 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 106 128 1.8E-71 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 131 150 1.8E-71 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 157 184 1.8E-71 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 Gene3D G3DSA:2.60.40.2540 6 158 6.2E-51 T 11-10-2018 AMS64_12625 41051f5a590cf967a093e41c7586187b 277 SUPERFAMILY SSF103088 147 269 1.57E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMS64_16735 f20eec018913f3bba3ec2eb3a9b13c51 104 Pfam PF02001 Protein of unknown function DUF134 3 91 4.9E-20 T 11-10-2018 IPR002852 Uncharacterised protein family UPF0251 AMS64_16735 f20eec018913f3bba3ec2eb3a9b13c51 104 Hamap MF_00674 UPF0251 protein . 2 100 22.691 T 11-10-2018 IPR002852 Uncharacterised protein family UPF0251 AMS64_16735 f20eec018913f3bba3ec2eb3a9b13c51 104 SUPERFAMILY SSF88659 33 81 9.16E-7 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMS64_16735 f20eec018913f3bba3ec2eb3a9b13c51 104 Gene3D G3DSA:1.10.10.10 26 82 9.8E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_18605 96779d3e267dd1dc67a65b7fb512ac7c 482 Pfam PF03573 outer membrane porin, OprD family 42 451 6.7E-21 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 AMS64_18605 96779d3e267dd1dc67a65b7fb512ac7c 482 Gene3D G3DSA:2.40.160.10 37 466 9.2E-27 T 11-10-2018 IPR023614 Porin domain superfamily AMS64_03910 90c750f2d415e096ff8e55caca077207 96 Pfam PF03692 Putative zinc- or iron-chelating domain 11 80 9.3E-11 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AMS64_03780 1e1355649a808a7ece665f4970a3067e 81 Pfam PF12292 Protein of unknown function (DUF3624) 1 73 1.7E-24 T 11-10-2018 IPR022072 Protein of unknown function DUF3624 AMS64_10740 08c5ba85960426f567b509b7bd319505 499 Pfam PF01235 Sodium:alanine symporter family 50 459 4.9E-154 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_10740 08c5ba85960426f567b509b7bd319505 499 PRINTS PR00175 Sodium/alanine symporter signature 295 313 2.8E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_10740 08c5ba85960426f567b509b7bd319505 499 PRINTS PR00175 Sodium/alanine symporter signature 353 375 2.8E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_10740 08c5ba85960426f567b509b7bd319505 499 PRINTS PR00175 Sodium/alanine symporter signature 86 108 2.8E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_10740 08c5ba85960426f567b509b7bd319505 499 PRINTS PR00175 Sodium/alanine symporter signature 204 223 2.8E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_10740 08c5ba85960426f567b509b7bd319505 499 PRINTS PR00175 Sodium/alanine symporter signature 176 194 2.8E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_10740 08c5ba85960426f567b509b7bd319505 499 PRINTS PR00175 Sodium/alanine symporter signature 416 436 2.8E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_10740 08c5ba85960426f567b509b7bd319505 499 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_10740 08c5ba85960426f567b509b7bd319505 499 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 447 8.7E-145 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_08320 e352faf7b552a28b36848b64fad5470e 279 SUPERFAMILY SSF56784 14 269 1.19E-52 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_08320 e352faf7b552a28b36848b64fad5470e 279 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 14 267 1.4E-106 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AMS64_08320 e352faf7b552a28b36848b64fad5470e 279 Gene3D G3DSA:1.10.150.240 32 110 8.4E-99 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMS64_08320 e352faf7b552a28b36848b64fad5470e 279 Gene3D G3DSA:3.40.50.1000 16 279 8.4E-99 T 11-10-2018 IPR023214 HAD superfamily AMS64_08320 e352faf7b552a28b36848b64fad5470e 279 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 279 135.226 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AMS64_08320 e352faf7b552a28b36848b64fad5470e 279 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 213 9.3E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_10540 53aec952be71cb0673485f01b320c1aa 593 Gene3D G3DSA:3.40.50.1220 24 147 9.7E-7 T 11-10-2018 AMS64_10540 53aec952be71cb0673485f01b320c1aa 593 Gene3D G3DSA:3.30.1600.10 37 112 9.7E-7 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily AMS64_10540 53aec952be71cb0673485f01b320c1aa 593 SUPERFAMILY SSF52467 13 249 6.54E-16 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMS64_10540 53aec952be71cb0673485f01b320c1aa 593 Pfam PF13289 SIR2-like domain 131 222 1.1E-11 T 11-10-2018 IPR039444 SIR2-like domain AMS64_22195 10db7b8cc4f69406169ba656dfe481b2 170 ProSitePatterns PS00213 Lipocalin signature. 28 41 - T 11-10-2018 IPR022272 Lipocalin family conserved site AMS64_22195 10db7b8cc4f69406169ba656dfe481b2 170 Gene3D G3DSA:2.40.128.20 17 170 3.2E-53 T 11-10-2018 IPR012674 Calycin AMS64_22195 10db7b8cc4f69406169ba656dfe481b2 170 PRINTS PR01171 Bacterial lipocalin signature 115 123 6.3E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMS64_22195 10db7b8cc4f69406169ba656dfe481b2 170 PRINTS PR01171 Bacterial lipocalin signature 157 167 6.3E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMS64_22195 10db7b8cc4f69406169ba656dfe481b2 170 PRINTS PR01171 Bacterial lipocalin signature 46 62 6.3E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMS64_22195 10db7b8cc4f69406169ba656dfe481b2 170 PRINTS PR01171 Bacterial lipocalin signature 29 43 6.3E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMS64_22195 10db7b8cc4f69406169ba656dfe481b2 170 PRINTS PR01171 Bacterial lipocalin signature 65 74 6.3E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMS64_22195 10db7b8cc4f69406169ba656dfe481b2 170 PRINTS PR01171 Bacterial lipocalin signature 130 141 6.3E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMS64_22195 10db7b8cc4f69406169ba656dfe481b2 170 PRINTS PR01171 Bacterial lipocalin signature 98 112 6.3E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMS64_22195 10db7b8cc4f69406169ba656dfe481b2 170 Pfam PF08212 Lipocalin-like domain 30 168 4.4E-45 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AMS64_22195 10db7b8cc4f69406169ba656dfe481b2 170 SUPERFAMILY SSF50814 5 169 1.34E-52 T 11-10-2018 IPR012674 Calycin AMS64_22195 10db7b8cc4f69406169ba656dfe481b2 170 PIRSF PIRSF036893 1 170 5.6E-48 T 11-10-2018 IPR022271 Lipocalin, ApoD type AMS64_18350 89ff048a42c7f79aef7897d28cda2354 278 Gene3D G3DSA:3.40.50.620 14 120 3.3E-7 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_18350 89ff048a42c7f79aef7897d28cda2354 278 SUPERFAMILY SSF52402 27 96 8.38E-11 T 11-10-2018 AMS64_20260 7ecdd585780c5a373c9655e832c8b670 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.594 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20260 7ecdd585780c5a373c9655e832c8b670 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMS64_20260 7ecdd585780c5a373c9655e832c8b670 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 2.2E-42 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20260 7ecdd585780c5a373c9655e832c8b670 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 2.2E-42 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20260 7ecdd585780c5a373c9655e832c8b670 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 2.2E-42 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20260 7ecdd585780c5a373c9655e832c8b670 115 Pfam PF01245 Ribosomal protein L19 4 113 1.4E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20260 7ecdd585780c5a373c9655e832c8b670 115 PIRSF PIRSF002191 1 115 6.1E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20260 7ecdd585780c5a373c9655e832c8b670 115 Gene3D G3DSA:2.30.30.790 2 115 4.7E-14 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_20260 7ecdd585780c5a373c9655e832c8b670 115 SUPERFAMILY SSF50104 2 114 7.62E-47 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMS64_20260 7ecdd585780c5a373c9655e832c8b670 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 2.7E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMS64_05655 7a23df6573f02fed97e1461d52af3a1a 143 SUPERFAMILY SSF52402 4 142 2.6E-39 T 11-10-2018 AMS64_05655 7a23df6573f02fed97e1461d52af3a1a 143 Pfam PF00582 Universal stress protein family 4 142 8.7E-34 T 11-10-2018 IPR006016 UspA AMS64_05655 7a23df6573f02fed97e1461d52af3a1a 143 PIRSF PIRSF006276 3 143 7.9E-24 T 11-10-2018 IPR006015 Universal stress protein A AMS64_05655 7a23df6573f02fed97e1461d52af3a1a 143 PRINTS PR01438 Universal stress protein signature 4 22 1.6E-19 T 11-10-2018 IPR006015 Universal stress protein A AMS64_05655 7a23df6573f02fed97e1461d52af3a1a 143 PRINTS PR01438 Universal stress protein signature 102 114 1.6E-19 T 11-10-2018 IPR006015 Universal stress protein A AMS64_05655 7a23df6573f02fed97e1461d52af3a1a 143 PRINTS PR01438 Universal stress protein signature 120 142 1.6E-19 T 11-10-2018 IPR006015 Universal stress protein A AMS64_05655 7a23df6573f02fed97e1461d52af3a1a 143 Gene3D G3DSA:3.40.50.620 2 143 7.5E-41 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_08495 656cdc9310ae4c80a3874a58fe87f445 181 Gene3D G3DSA:3.40.50.2020 1 180 1.6E-66 T 11-10-2018 AMS64_08495 656cdc9310ae4c80a3874a58fe87f445 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.464 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AMS64_08495 656cdc9310ae4c80a3874a58fe87f445 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 10 177 1.8E-71 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AMS64_08495 656cdc9310ae4c80a3874a58fe87f445 181 SUPERFAMILY SSF53271 13 177 3.41E-53 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMS64_08495 656cdc9310ae4c80a3874a58fe87f445 181 Pfam PF00156 Phosphoribosyl transferase domain 32 155 1.1E-15 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMS64_18710 3b5e6d1507c715f4ba47a155447f19c1 108 Gene3D G3DSA:3.30.750.24 2 101 7.3E-18 T 11-10-2018 IPR036513 STAS domain superfamily AMS64_18710 3b5e6d1507c715f4ba47a155447f19c1 108 Pfam PF13466 STAS domain 16 91 5.5E-15 T 11-10-2018 IPR002645 STAS domain AMS64_18710 3b5e6d1507c715f4ba47a155447f19c1 108 SUPERFAMILY SSF52091 1 96 4.91E-19 T 11-10-2018 IPR036513 STAS domain superfamily AMS64_11030 82425108fe00f3783f86037bbc93ecb3 308 PIRSF PIRSF000089 1 308 2.7E-103 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AMS64_11030 82425108fe00f3783f86037bbc93ecb3 308 Gene3D G3DSA:3.40.50.620 2 182 3.1E-48 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_11030 82425108fe00f3783f86037bbc93ecb3 308 SMART SM00893 3 181 3.8E-34 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMS64_11030 82425108fe00f3783f86037bbc93ecb3 308 Gene3D G3DSA:3.40.50.1220 183 308 9.4E-56 T 11-10-2018 AMS64_11030 82425108fe00f3783f86037bbc93ecb3 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AMS64_11030 82425108fe00f3783f86037bbc93ecb3 308 Pfam PF01012 Electron transfer flavoprotein domain 3 163 1.6E-32 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMS64_11030 82425108fe00f3783f86037bbc93ecb3 308 SUPERFAMILY SSF52402 2 180 1.81E-44 T 11-10-2018 AMS64_11030 82425108fe00f3783f86037bbc93ecb3 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 3.4E-35 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AMS64_11030 82425108fe00f3783f86037bbc93ecb3 308 SUPERFAMILY SSF52467 188 308 4.03E-46 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMS64_17340 e9516ac030f8c191befdc0e5b514c02b 787 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 23 639 8.5E-265 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 AMS64_17340 e9516ac030f8c191befdc0e5b514c02b 787 Pfam PF08497 Radical SAM N-terminal 23 374 8.4E-146 T 11-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal AMS64_17340 e9516ac030f8c191befdc0e5b514c02b 787 Pfam PF11842 Domain of unknown function (DUF3362) 589 743 3.2E-44 T 11-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal AMS64_17340 e9516ac030f8c191befdc0e5b514c02b 787 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 375 395 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMS64_17340 e9516ac030f8c191befdc0e5b514c02b 787 SMART SM00729 371 618 9.4E-7 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMS64_17340 e9516ac030f8c191befdc0e5b514c02b 787 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 23 641 50.166 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 AMS64_17340 e9516ac030f8c191befdc0e5b514c02b 787 Gene3D G3DSA:3.80.30.20 370 620 3.6E-16 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMS64_17340 e9516ac030f8c191befdc0e5b514c02b 787 Pfam PF04055 Radical SAM superfamily 375 580 1.5E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMS64_17340 e9516ac030f8c191befdc0e5b514c02b 787 SUPERFAMILY SSF102114 374 658 3.14E-12 T 11-10-2018 AMS64_14555 e397f60a4df9310771852b34df910e3a 487 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.527 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMS64_14555 e397f60a4df9310771852b34df910e3a 487 Pfam PF00361 Proton-conducting membrane transporter 122 420 1.8E-74 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_14555 e397f60a4df9310771852b34df910e3a 487 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 1.7E-128 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMS64_07170 4ed983a6a89999ecfc717779f1699e2c 67 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 63 3.5E-27 T 11-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing AMS64_07170 4ed983a6a89999ecfc717779f1699e2c 67 PIRSF PIRSF036704 1 65 1.2E-11 T 11-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing AMS64_16490 7e167bbab4adcd488561ebc5231d6313 494 Gene3D G3DSA:2.40.170.10 84 494 4.1E-159 T 11-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 AMS64_16490 7e167bbab4adcd488561ebc5231d6313 494 Pfam PF11471 Maltoporin periplasmic N-terminal extension 3 53 1.7E-13 T 11-10-2018 IPR021570 LamB-type porin N-terminal domain AMS64_16490 7e167bbab4adcd488561ebc5231d6313 494 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 110 490 7.0E-135 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AMS64_16490 7e167bbab4adcd488561ebc5231d6313 494 SUPERFAMILY SSF56935 85 494 1.53E-121 T 11-10-2018 AMS64_16490 7e167bbab4adcd488561ebc5231d6313 494 Pfam PF02264 LamB porin 88 494 2.5E-102 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AMS64_14165 60191a71db56e3fb1d14d4559f37bb3d 71 Pfam PF05154 TM2 domain 2 45 6.9E-10 T 11-10-2018 IPR007829 TM2 domain AMS64_15665 a1693da7cd91ab566af08fc48c3e1f6d 89 Gene3D G3DSA:1.10.260.40 12 87 2.2E-16 T 11-10-2018 AMS64_15665 a1693da7cd91ab566af08fc48c3e1f6d 89 SMART SM00530 19 74 4.8E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_15665 a1693da7cd91ab566af08fc48c3e1f6d 89 Pfam PF01381 Helix-turn-helix 20 65 8.4E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_15665 a1693da7cd91ab566af08fc48c3e1f6d 89 SUPERFAMILY SSF47413 14 76 8.85E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_06245 de48322c55c10d49ab43700c44ae2802 466 SUPERFAMILY SSF111283 10 465 1.83E-110 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AMS64_06245 de48322c55c10d49ab43700c44ae2802 466 Pfam PF01523 Putative modulator of DNA gyrase 26 319 4.9E-56 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AMS64_06245 de48322c55c10d49ab43700c44ae2802 466 PIRSF PIRSF004919 6 466 1.7E-112 T 11-10-2018 IPR025502 TldD AMS64_06245 de48322c55c10d49ab43700c44ae2802 466 Gene3D G3DSA:3.30.2290.10 7 227 3.9E-17 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AMS64_16700 48f5528ed13d038b753694dbe768b67e 295 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 291 1.7E-93 T 11-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AMS64_16700 48f5528ed13d038b753694dbe768b67e 295 Gene3D G3DSA:3.40.50.720 3 279 1.9E-110 T 11-10-2018 AMS64_16700 48f5528ed13d038b753694dbe768b67e 295 SUPERFAMILY SSF51735 1 292 5.75E-98 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_16700 48f5528ed13d038b753694dbe768b67e 295 Pfam PF04321 RmlD substrate binding domain 1 292 3.3E-101 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AMS64_16700 48f5528ed13d038b753694dbe768b67e 295 Gene3D G3DSA:3.90.25.10 161 286 1.9E-110 T 11-10-2018 AMS64_08480 3075abb5c763b651621e8d24c82f4187 122 Gene3D G3DSA:1.20.120.910 1 119 8.9E-14 T 11-10-2018 AMS64_12910 7d4f17fda31841afd286d8db3f95c59b 322 SUPERFAMILY SSF53590 3 310 1.96E-91 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like AMS64_12910 7d4f17fda31841afd286d8db3f95c59b 322 Gene3D G3DSA:3.90.245.10 1 317 4.3E-104 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like AMS64_12910 7d4f17fda31841afd286d8db3f95c59b 322 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 291 1.2E-79 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMS64_12815 c7093c9df0f8584229b06eddc0888e23 512 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 2.4E-110 T 11-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase AMS64_12815 c7093c9df0f8584229b06eddc0888e23 512 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 182 8.4E-57 T 11-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices AMS64_16285 f686711613c5b1033ec9418c50c6aa62 447 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 379 9.4E-149 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AMS64_16285 f686711613c5b1033ec9418c50c6aa62 447 PIRSF PIRSF004539 1 447 1.8E-184 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AMS64_16285 f686711613c5b1033ec9418c50c6aa62 447 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 447 7.9E-158 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AMS64_07330 57539764bd50c3207986dc0a66dc790e 130 SUPERFAMILY SSF101801 48 128 3.66E-24 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_07330 57539764bd50c3207986dc0a66dc790e 130 PRINTS PR00956 Flagellar motor switch protein FliN signature 50 66 2.7E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMS64_07330 57539764bd50c3207986dc0a66dc790e 130 PRINTS PR00956 Flagellar motor switch protein FliN signature 67 83 2.7E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMS64_07330 57539764bd50c3207986dc0a66dc790e 130 PRINTS PR00956 Flagellar motor switch protein FliN signature 83 96 2.7E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMS64_07330 57539764bd50c3207986dc0a66dc790e 130 PRINTS PR00956 Flagellar motor switch protein FliN signature 96 111 2.7E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMS64_07330 57539764bd50c3207986dc0a66dc790e 130 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 50 120 2.4E-24 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AMS64_07330 57539764bd50c3207986dc0a66dc790e 130 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 48 121 9.1E-33 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AMS64_07330 57539764bd50c3207986dc0a66dc790e 130 Gene3D G3DSA:2.30.330.10 38 130 4.7E-33 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_05060 724307669d8d869f9ce7ced5c982547b 196 Pfam PF01810 LysE type translocator 19 185 1.0E-18 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMS64_14770 2ece7c80a1e4ecac21b904da8f989d65 268 Pfam PF06629 MltA-interacting protein MipA 51 266 4.6E-37 T 11-10-2018 IPR010583 MltA-interacting MipA AMS64_01000 97582f9b90288eb86237dd34c8c68507 286 SUPERFAMILY SSF53850 37 244 6.73E-17 T 11-10-2018 AMS64_07205 8afa729db4d5c63ea5cd20ea188ac873 113 Pfam PF16998 17 kDa outer membrane surface antigen 19 109 5.2E-11 T 11-10-2018 IPR032635 Surface antigen domain AMS64_18090 71640413cf15131a89735546b8a50fba 111 Pfam PF04287 tRNA pseudouridine synthase C 8 102 1.7E-32 T 11-10-2018 IPR023376 YqcC-like domain AMS64_18090 71640413cf15131a89735546b8a50fba 111 Gene3D G3DSA:1.20.1440.40 1 105 1.3E-31 T 11-10-2018 IPR036814 YqcC-like superfamily AMS64_18090 71640413cf15131a89735546b8a50fba 111 SUPERFAMILY SSF158452 1 106 8.11E-34 T 11-10-2018 IPR036814 YqcC-like superfamily AMS64_18090 71640413cf15131a89735546b8a50fba 111 PIRSF PIRSF006257 1 108 5.5E-32 T 11-10-2018 IPR007384 Protein of unknown function UCP006257 AMS64_01595 f7ff50b40e8c01d80b443add19591b72 335 Gene3D G3DSA:1.10.260.40 1 59 6.9E-23 T 11-10-2018 AMS64_01595 f7ff50b40e8c01d80b443add19591b72 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AMS64_01595 f7ff50b40e8c01d80b443add19591b72 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.7E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_01595 f7ff50b40e8c01d80b443add19591b72 335 SUPERFAMILY SSF53822 61 331 2.75E-81 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMS64_01595 f7ff50b40e8c01d80b443add19591b72 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.6E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_01595 f7ff50b40e8c01d80b443add19591b72 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.6E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_01595 f7ff50b40e8c01d80b443add19591b72 335 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.6E-39 T 11-10-2018 AMS64_01595 f7ff50b40e8c01d80b443add19591b72 335 SMART SM00354 1 71 1.8E-30 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMS64_01595 f7ff50b40e8c01d80b443add19591b72 335 Gene3D G3DSA:3.40.50.2300 160 289 1.0E-70 T 11-10-2018 AMS64_01595 f7ff50b40e8c01d80b443add19591b72 335 SUPERFAMILY SSF47413 2 58 3.7E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_01595 f7ff50b40e8c01d80b443add19591b72 335 Gene3D G3DSA:3.40.50.2300 63 306 1.0E-70 T 11-10-2018 AMS64_06310 47461e3345cc4fa56dfed333b6066bf6 349 Pfam PF02562 PhoH-like protein 123 326 2.8E-95 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 AMS64_06310 47461e3345cc4fa56dfed333b6066bf6 349 SUPERFAMILY SSF52540 94 298 1.78E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_06310 47461e3345cc4fa56dfed333b6066bf6 349 Gene3D G3DSA:3.40.50.300 120 326 2.9E-73 T 11-10-2018 AMS64_01180 43f58676e3289e073254f1f97719a0fd 290 Pfam PF04393 Protein of unknown function (DUF535) 12 284 9.8E-78 T 11-10-2018 IPR007488 Protein of unknown function DUF535 AMS64_12040 5a1fa58c40d9cae6d0c58f8a73300b7f 130 Gene3D G3DSA:3.30.2220.20 7 130 4.9E-6 T 11-10-2018 IPR038556 Tail assembly chaperone Gp13-like superfamily AMS64_02505 25ebdf1a34bd0dd094cfd06ff34efebc 348 Pfam PF04860 Phage portal protein 95 340 3.8E-15 T 11-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein AMS64_02505 25ebdf1a34bd0dd094cfd06ff34efebc 348 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 53 327 1.2E-74 T 11-10-2018 IPR006430 Phage portal protein PBSX family AMS64_02505 25ebdf1a34bd0dd094cfd06ff34efebc 348 PIRSF PIRSF018494 1 340 2.3E-128 T 11-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria AMS64_16575 9292fe7f1aad284fdfd04ef623a08d79 295 Pfam PF13440 Polysaccharide biosynthesis protein 2 153 9.4E-5 T 11-10-2018 AMS64_13920 e861b8a34a28033410d5d48ab5e3f19e 323 SUPERFAMILY SSF81345 5 319 9.55E-80 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_13920 e861b8a34a28033410d5d48ab5e3f19e 323 Pfam PF01032 FecCD transport family 13 319 1.9E-91 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMS64_13920 e861b8a34a28033410d5d48ab5e3f19e 323 Gene3D G3DSA:1.10.3470.10 2 322 2.2E-95 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_13545 e86cdd5f0e4f12b256d76a9c29dd8c6a 111 Gene3D G3DSA:1.20.120.160 1 110 4.0E-24 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_13545 e86cdd5f0e4f12b256d76a9c29dd8c6a 111 SUPERFAMILY SSF47226 2 109 2.36E-25 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMS64_13545 e86cdd5f0e4f12b256d76a9c29dd8c6a 111 Pfam PF01627 Hpt domain 24 98 1.2E-11 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 SUPERFAMILY SSF52317 3 189 5.69E-47 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 PRINTS PR00097 Anthranilate synthase component II signature 53 62 3.6E-35 T 11-10-2018 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 PRINTS PR00097 Anthranilate synthase component II signature 167 180 3.6E-35 T 11-10-2018 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 PRINTS PR00097 Anthranilate synthase component II signature 80 91 3.6E-35 T 11-10-2018 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 PRINTS PR00097 Anthranilate synthase component II signature 125 137 3.6E-35 T 11-10-2018 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 PRINTS PR00097 Anthranilate synthase component II signature 105 113 3.6E-35 T 11-10-2018 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 PRINTS PR00097 Anthranilate synthase component II signature 4 18 3.6E-35 T 11-10-2018 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 Gene3D G3DSA:3.40.50.880 2 191 2.3E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 5.8E-51 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 167 180 5.3E-14 T 11-10-2018 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 5.3E-14 T 11-10-2018 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 5.3E-14 T 11-10-2018 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 1.7E-5 T 11-10-2018 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 1.7E-5 T 11-10-2018 AMS64_16880 66bb786743ddf807c87e7a15291bef4b 199 Pfam PF00117 Glutamine amidotransferase class-I 6 188 3.3E-43 T 11-10-2018 IPR017926 Glutamine amidotransferase AMS64_14075 6a7dbaaf995540250261678422872856 123 Gene3D G3DSA:3.30.450.20 16 118 3.8E-42 T 11-10-2018 AMS64_14075 6a7dbaaf995540250261678422872856 123 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 8 105 3.9E-41 T 11-10-2018 IPR009320 Antitoxin CbeA GO:0051495 AMS64_14075 6a7dbaaf995540250261678422872856 123 SUPERFAMILY SSF143737 7 104 6.67E-43 T 11-10-2018 IPR038025 Antitoxin CbeA superfamily AMS64_20520 2bd07b802cb57655fe4143391740d186 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 3.6E-22 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AMS64_20520 2bd07b802cb57655fe4143391740d186 91 Gene3D G3DSA:1.20.58.1000 1 91 7.9E-30 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily AMS64_07075 a549c447ea042f6c752325bcf1940b1c 147 Pfam PF07681 DoxX 25 105 2.1E-16 T 11-10-2018 IPR032808 DoxX family AMS64_00860 757e85e701eb2041126ea7bf5642ace4 125 PIRSF PIRSF011271 1 118 9.2E-63 T 11-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 AMS64_00860 757e85e701eb2041126ea7bf5642ace4 125 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 97 115 2.3E-40 T 11-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 AMS64_00860 757e85e701eb2041126ea7bf5642ace4 125 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 79 97 2.3E-40 T 11-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 AMS64_00860 757e85e701eb2041126ea7bf5642ace4 125 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 60 76 2.3E-40 T 11-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 AMS64_00860 757e85e701eb2041126ea7bf5642ace4 125 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 5 28 2.3E-40 T 11-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 AMS64_00860 757e85e701eb2041126ea7bf5642ace4 125 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 30 51 2.3E-40 T 11-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 AMS64_00860 757e85e701eb2041126ea7bf5642ace4 125 Pfam PF05932 Tir chaperone protein (CesT) family 8 114 9.3E-20 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AMS64_00860 757e85e701eb2041126ea7bf5642ace4 125 Gene3D G3DSA:3.30.1460.10 1 116 2.3E-41 T 11-10-2018 AMS64_00860 757e85e701eb2041126ea7bf5642ace4 125 SUPERFAMILY SSF69635 5 116 3.11E-41 T 11-10-2018 AMS64_15930 8a3c551de4e0455f77fc6e573b71a6f7 289 SUPERFAMILY SSF159501 5 180 1.41E-8 T 11-10-2018 AMS64_05070 267933d08b9eda02ddda3dda15635490 368 SUPERFAMILY SSF69593 77 317 1.44E-8 T 11-10-2018 AMS64_05070 267933d08b9eda02ddda3dda15635490 368 Pfam PF01553 Acyltransferase 91 193 4.5E-9 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMS64_10440 398dc2021c8420b8cfcfc166a90d0263 281 Pfam PF06707 Protein of unknown function (DUF1194) 24 228 6.8E-57 T 11-10-2018 IPR010607 Protein of unknown function DUF1194 AMS64_10440 398dc2021c8420b8cfcfc166a90d0263 281 SUPERFAMILY SSF53300 24 204 1.0E-16 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_10440 398dc2021c8420b8cfcfc166a90d0263 281 Gene3D G3DSA:3.40.50.410 23 227 3.6E-10 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_22015 f212ccf32a487cb3a638471aded715b1 64 Gene3D G3DSA:1.10.260.40 1 59 1.1E-21 T 11-10-2018 AMS64_22015 f212ccf32a487cb3a638471aded715b1 64 SUPERFAMILY SSF47413 1 55 9.0E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_22015 f212ccf32a487cb3a638471aded715b1 64 Pfam PF14549 DNA-binding transcriptional regulator Cro 2 56 8.0E-20 T 11-10-2018 AMS64_05260 692343bcfe1fc9a61d3211f31e284f19 213 SUPERFAMILY SSF55895 26 196 3.93E-34 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AMS64_05260 692343bcfe1fc9a61d3211f31e284f19 213 Pfam PF00445 Ribonuclease T2 family 30 190 2.0E-18 T 11-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AMS64_05260 692343bcfe1fc9a61d3211f31e284f19 213 Gene3D G3DSA:3.90.730.10 21 210 3.1E-33 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AMS64_05260 692343bcfe1fc9a61d3211f31e284f19 213 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 96 107 - T 11-10-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 AMS64_05260 692343bcfe1fc9a61d3211f31e284f19 213 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 57 64 - T 11-10-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AMS64_13400 dcd89009a76dd07157d32c299bc71942 251 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 3.2E-116 T 11-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 AMS64_13400 dcd89009a76dd07157d32c299bc71942 251 Pfam PF00899 ThiF family 13 245 2.9E-62 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMS64_13400 dcd89009a76dd07157d32c299bc71942 251 Gene3D G3DSA:3.40.50.720 5 251 1.2E-85 T 11-10-2018 AMS64_13400 dcd89009a76dd07157d32c299bc71942 251 SUPERFAMILY SSF69572 5 249 3.14E-84 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AMS64_03895 d3c6aa3c59d0688efd83bb215a28d160 301 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 297 3.3E-91 T 11-10-2018 AMS64_03895 d3c6aa3c59d0688efd83bb215a28d160 301 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.796 T 11-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AMS64_03895 d3c6aa3c59d0688efd83bb215a28d160 301 Pfam PF01040 UbiA prenyltransferase family 23 256 1.7E-39 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AMS64_03895 d3c6aa3c59d0688efd83bb215a28d160 301 PIRSF PIRSF005355 1 301 1.0E-83 T 11-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 AMS64_08340 d2f5f78849c3087ff216d77982f7af88 204 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 7 171 2.6E-47 T 11-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AMS64_08340 d2f5f78849c3087ff216d77982f7af88 204 Pfam PF08534 Redoxin 37 157 1.8E-10 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMS64_08340 d2f5f78849c3087ff216d77982f7af88 204 SUPERFAMILY SSF52833 50 172 1.39E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_08340 d2f5f78849c3087ff216d77982f7af88 204 Gene3D G3DSA:3.40.30.10 26 179 5.6E-31 T 11-10-2018 AMS64_10720 06b7d90add8376c28d7aee1eb90457a7 198 Pfam PF01184 GPR1/FUN34/yaaH family 2 175 2.5E-39 T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AMS64_10720 06b7d90add8376c28d7aee1eb90457a7 198 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AMS64_03305 fd3108d4a41b22ebe1b2af4873ef05de 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 182 1.7E-62 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AMS64_03305 fd3108d4a41b22ebe1b2af4873ef05de 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 192 27.69 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AMS64_03305 fd3108d4a41b22ebe1b2af4873ef05de 204 Pfam PF01121 Dephospho-CoA kinase 3 178 3.0E-72 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AMS64_03305 fd3108d4a41b22ebe1b2af4873ef05de 204 Gene3D G3DSA:3.40.50.300 1 204 4.1E-69 T 11-10-2018 AMS64_03305 fd3108d4a41b22ebe1b2af4873ef05de 204 SUPERFAMILY SSF52540 1 191 9.35E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_12755 c8be0067b0470a08006d6440ff14d135 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 301 4.4E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_12755 c8be0067b0470a08006d6440ff14d135 303 Gene3D G3DSA:1.10.3720.10 96 299 1.1E-18 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_12755 c8be0067b0470a08006d6440ff14d135 303 SUPERFAMILY SSF161098 100 284 6.15E-25 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_12755 c8be0067b0470a08006d6440ff14d135 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 65 3.5E-13 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMS64_10360 1361cbba3867761328c2bde162e04fa6 176 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 147 6.4E-47 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_10360 1361cbba3867761328c2bde162e04fa6 176 Pfam PF01750 Hydrogenase maturation protease 20 145 2.5E-32 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_10360 1361cbba3867761328c2bde162e04fa6 176 Gene3D G3DSA:3.40.50.1450 1 156 2.4E-47 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily AMS64_10360 1361cbba3867761328c2bde162e04fa6 176 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 4 152 7.3E-46 T 11-10-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 AMS64_10360 1361cbba3867761328c2bde162e04fa6 176 SUPERFAMILY SSF53163 1 156 6.28E-45 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily AMS64_10360 1361cbba3867761328c2bde162e04fa6 176 PRINTS PR00446 Hydrogen uptake protein signature 3 15 2.9E-21 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_10360 1361cbba3867761328c2bde162e04fa6 176 PRINTS PR00446 Hydrogen uptake protein signature 35 52 2.9E-21 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_10360 1361cbba3867761328c2bde162e04fa6 176 PRINTS PR00446 Hydrogen uptake protein signature 56 66 2.9E-21 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_10360 1361cbba3867761328c2bde162e04fa6 176 PRINTS PR00446 Hydrogen uptake protein signature 67 83 2.9E-21 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_10360 1361cbba3867761328c2bde162e04fa6 176 PRINTS PR00446 Hydrogen uptake protein signature 15 26 2.9E-21 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMS64_19415 a37b4d73bebc7a557b14ad409d6c9d95 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.6E-30 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMS64_19415 a37b4d73bebc7a557b14ad409d6c9d95 87 Pfam PF17209 Hfq protein 7 68 4.8E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMS64_19415 a37b4d73bebc7a557b14ad409d6c9d95 87 Gene3D G3DSA:2.30.30.100 1 72 1.6E-34 T 11-10-2018 AMS64_19415 a37b4d73bebc7a557b14ad409d6c9d95 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.549 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMS64_19415 a37b4d73bebc7a557b14ad409d6c9d95 87 SUPERFAMILY SSF50182 7 69 1.67E-24 T 11-10-2018 IPR010920 LSM domain superfamily AMS64_16050 6b78a143d5892d71e7ec23efdc14c272 216 SUPERFAMILY SSF52540 17 204 1.25E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_16050 6b78a143d5892d71e7ec23efdc14c272 216 Pfam PF00005 ABC transporter 22 168 2.2E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_16050 6b78a143d5892d71e7ec23efdc14c272 216 Gene3D G3DSA:3.40.50.300 6 209 5.2E-45 T 11-10-2018 AMS64_16050 6b78a143d5892d71e7ec23efdc14c272 216 SMART SM00382 26 214 8.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_16050 6b78a143d5892d71e7ec23efdc14c272 216 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_22335 8f068623f67e9ffcb6a80822433a9385 371 Pfam PF02481 DNA recombination-mediator protein A 82 281 4.5E-74 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AMS64_22335 8f068623f67e9ffcb6a80822433a9385 371 Gene3D G3DSA:3.40.50.450 2 292 5.1E-96 T 11-10-2018 AMS64_22335 8f068623f67e9ffcb6a80822433a9385 371 SUPERFAMILY SSF102405 84 290 4.81E-39 T 11-10-2018 AMS64_22335 8f068623f67e9ffcb6a80822433a9385 371 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 77 290 6.9E-77 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AMS64_08785 5e6239b21d8f3e026ffae48dacedb5c6 62 Pfam PF14056 Domain of unknown function (DUF4250) 8 61 6.6E-24 T 11-10-2018 IPR025346 Protein of unknown function DUF4250 AMS64_08525 b74d2734e33a9304941cf1b6c08e1937 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 301 6.7E-74 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMS64_08525 b74d2734e33a9304941cf1b6c08e1937 329 PIRSF PIRSF026649 7 312 1.3E-101 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMS64_08525 b74d2734e33a9304941cf1b6c08e1937 329 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 8 308 2.1E-102 T 11-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 AMS64_08525 b74d2734e33a9304941cf1b6c08e1937 329 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 2 308 47.336 T 11-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 AMS64_15095 24f3afe4d4b01a1c4a389817ee2122e3 298 Gene3D G3DSA:1.20.1330.10 45 174 8.2E-79 T 11-10-2018 AMS64_15095 24f3afe4d4b01a1c4a389817ee2122e3 298 Pfam PF00700 Bacterial flagellin C-terminal helical region 213 297 9.3E-25 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMS64_15095 24f3afe4d4b01a1c4a389817ee2122e3 298 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 7.4E-42 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMS64_15095 24f3afe4d4b01a1c4a389817ee2122e3 298 Gene3D G3DSA:1.20.58.1830 5 33 8.2E-79 T 11-10-2018 AMS64_15095 24f3afe4d4b01a1c4a389817ee2122e3 298 Gene3D G3DSA:1.10.8.410 245 297 1.0E-23 T 11-10-2018 AMS64_15095 24f3afe4d4b01a1c4a389817ee2122e3 298 SUPERFAMILY SSF64518 1 297 7.06E-98 T 11-10-2018 AMS64_15095 24f3afe4d4b01a1c4a389817ee2122e3 298 Gene3D G3DSA:2.170.280.10 175 186 8.2E-79 T 11-10-2018 AMS64_15095 24f3afe4d4b01a1c4a389817ee2122e3 298 PRINTS PR00207 Flagellin signature 111 134 1.2E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMS64_15095 24f3afe4d4b01a1c4a389817ee2122e3 298 PRINTS PR00207 Flagellin signature 37 54 1.2E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMS64_15095 24f3afe4d4b01a1c4a389817ee2122e3 298 PRINTS PR00207 Flagellin signature 76 95 1.2E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMS64_10170 bfedaf1ed3f36ccb79435e0815d840f3 118 Pfam PF03788 LrgA family 21 111 1.2E-22 T 11-10-2018 IPR005538 LrgA/CidA family GO:0016021 AMS64_16540 bf95ab9417147d5af51c206b8b8619d9 305 Pfam PF13737 Transposase DDE domain 19 130 3.2E-39 T 11-10-2018 IPR025668 Transposase DDE domain AMS64_21070 ef4ec5034809aca7895ebe3b0481763c 165 Gene3D G3DSA:3.40.630.30 6 154 1.3E-32 T 11-10-2018 AMS64_21070 ef4ec5034809aca7895ebe3b0481763c 165 SUPERFAMILY SSF55729 7 150 4.12E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_21070 ef4ec5034809aca7895ebe3b0481763c 165 Pfam PF00583 Acetyltransferase (GNAT) family 27 127 3.4E-13 T 11-10-2018 IPR000182 GNAT domain AMS64_13180 b8a4dcde6b0dc8caad995cedeedf3b0c 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 8 469 8.7E-47 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AMS64_13180 b8a4dcde6b0dc8caad995cedeedf3b0c 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 461 1.6E-77 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AMS64_05090 859a0537adfa35efd1d28a79c57c6693 308 Gene3D G3DSA:2.40.440.10 22 307 8.1E-86 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMS64_05090 859a0537adfa35efd1d28a79c57c6693 308 SUPERFAMILY SSF141523 95 234 1.57E-26 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMS64_05090 859a0537adfa35efd1d28a79c57c6693 308 Pfam PF03734 L,D-transpeptidase catalytic domain 101 232 4.3E-16 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMS64_12835 61bbfbb0dc54cfe63ff848092f6764a3 149 Gene3D G3DSA:3.90.1720.10 30 149 7.0E-40 T 11-10-2018 AMS64_12835 61bbfbb0dc54cfe63ff848092f6764a3 149 Pfam PF00877 NlpC/P60 family 42 146 5.1E-28 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AMS64_12835 61bbfbb0dc54cfe63ff848092f6764a3 149 SUPERFAMILY SSF54001 23 148 9.48E-40 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMS64_14950 0fd163b55e4b39c74cc70385ce99cbd6 407 SUPERFAMILY SSF116734 8 205 3.11E-34 T 11-10-2018 AMS64_14950 0fd163b55e4b39c74cc70385ce99cbd6 407 Gene3D G3DSA:3.90.220.20 8 400 8.3E-68 T 11-10-2018 AMS64_14950 0fd163b55e4b39c74cc70385ce99cbd6 407 Gene3D G3DSA:1.10.287.1120 157 396 8.3E-68 T 11-10-2018 AMS64_14950 0fd163b55e4b39c74cc70385ce99cbd6 407 Gene3D G3DSA:3.90.220.20 218 353 8.3E-68 T 11-10-2018 AMS64_14950 0fd163b55e4b39c74cc70385ce99cbd6 407 Pfam PF01420 Type I restriction modification DNA specificity domain 272 384 8.0E-8 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AMS64_14950 0fd163b55e4b39c74cc70385ce99cbd6 407 Pfam PF01420 Type I restriction modification DNA specificity domain 21 184 4.8E-9 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AMS64_14950 0fd163b55e4b39c74cc70385ce99cbd6 407 SUPERFAMILY SSF116734 213 402 1.8E-31 T 11-10-2018 AMS64_08670 e135454558f851ac90eacc63507063c2 97 SUPERFAMILY SSF46689 5 90 1.52E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_08670 e135454558f851ac90eacc63507063c2 97 Pfam PF01527 Transposase 5 76 8.4E-17 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMS64_08670 e135454558f851ac90eacc63507063c2 97 Gene3D G3DSA:1.10.10.60 9 89 2.1E-8 T 11-10-2018 AMS64_01765 ca2284f0b3e315a3c8b6babd068231c9 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.6E-62 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AMS64_01765 ca2284f0b3e315a3c8b6babd068231c9 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.361 T 11-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AMS64_01765 ca2284f0b3e315a3c8b6babd068231c9 161 Pfam PF03737 Aldolase/RraA 6 152 2.4E-34 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AMS64_01765 ca2284f0b3e315a3c8b6babd068231c9 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 2.0E-82 T 11-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AMS64_01765 ca2284f0b3e315a3c8b6babd068231c9 161 Gene3D G3DSA:3.50.30.40 1 161 8.3E-56 T 11-10-2018 AMS64_01765 ca2284f0b3e315a3c8b6babd068231c9 161 SUPERFAMILY SSF89562 2 159 1.57E-43 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AMS64_02475 26b21420f49a8ada397141c661c80c09 171 Pfam PF06891 P2 phage tail completion protein R (GpR) 17 143 4.6E-18 T 11-10-2018 IPR009678 Bacteriophage tail completion protein R AMS64_06180 c54a1ef08af02983810ae53fa9af170f 396 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 286 376 4.9E-24 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_06180 c54a1ef08af02983810ae53fa9af170f 396 SUPERFAMILY SSF69189 286 378 9.42E-25 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_06180 c54a1ef08af02983810ae53fa9af170f 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 1.6E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMS64_06180 c54a1ef08af02983810ae53fa9af170f 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 68 79 1.6E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMS64_06180 c54a1ef08af02983810ae53fa9af170f 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 1.6E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMS64_06180 c54a1ef08af02983810ae53fa9af170f 396 Gene3D G3DSA:2.60.410.10 286 376 1.5E-28 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_06180 c54a1ef08af02983810ae53fa9af170f 396 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 266 3.5E-90 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMS64_06180 c54a1ef08af02983810ae53fa9af170f 396 SMART SM00936 286 376 5.5E-33 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMS64_06180 c54a1ef08af02983810ae53fa9af170f 396 Gene3D G3DSA:3.40.710.10 29 285 2.3E-90 T 11-10-2018 AMS64_06180 c54a1ef08af02983810ae53fa9af170f 396 SUPERFAMILY SSF56601 4 286 8.46E-82 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMS64_17970 6f54412f1aa7621edf9f931bbbe33db2 196 Hamap MF_00052_B Ribonuclease HII [rnhB]. 10 189 37.875 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 AMS64_17970 6f54412f1aa7621edf9f931bbbe33db2 196 Gene3D G3DSA:3.30.420.10 4 195 3.5E-74 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMS64_17970 6f54412f1aa7621edf9f931bbbe33db2 196 Pfam PF01351 Ribonuclease HII 12 187 1.7E-40 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain AMS64_17970 6f54412f1aa7621edf9f931bbbe33db2 196 SUPERFAMILY SSF53098 6 194 1.52E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_12905 4fe95cdda6cf43a3c622943015cf201d 111 Pfam PF12321 Protein of unknown function (DUF3634) 6 98 9.8E-18 T 11-10-2018 IPR022090 Protein of unknown function DUF3634 AMS64_22375 0d45dc4609429521f0d05c31b903dc8a 469 Gene3D G3DSA:3.30.590.10 105 457 1.2E-146 T 11-10-2018 AMS64_22375 0d45dc4609429521f0d05c31b903dc8a 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 2.5E-207 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMS64_22375 0d45dc4609429521f0d05c31b903dc8a 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 5.5E-136 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMS64_22375 0d45dc4609429521f0d05c31b903dc8a 469 SUPERFAMILY SSF55931 102 468 1.57E-136 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMS64_22375 0d45dc4609429521f0d05c31b903dc8a 469 Gene3D G3DSA:3.10.20.70 2 104 3.4E-40 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMS64_22375 0d45dc4609429521f0d05c31b903dc8a 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMS64_22375 0d45dc4609429521f0d05c31b903dc8a 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMS64_22375 0d45dc4609429521f0d05c31b903dc8a 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 11-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMS64_22375 0d45dc4609429521f0d05c31b903dc8a 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.5E-31 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMS64_22375 0d45dc4609429521f0d05c31b903dc8a 469 SUPERFAMILY SSF54368 3 100 7.98E-37 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMS64_22375 0d45dc4609429521f0d05c31b903dc8a 469 SMART SM01230 102 379 2.0E-145 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMS64_13480 bc82c6001f26df7a3fc07e84c82a9f1b 151 Gene3D G3DSA:1.10.1130.10 65 132 2.1E-27 T 11-10-2018 AMS64_13480 bc82c6001f26df7a3fc07e84c82a9f1b 151 PIRSF PIRSF006105 1 151 2.1E-48 T 11-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AMS64_13480 bc82c6001f26df7a3fc07e84c82a9f1b 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 28 146 2.6E-47 T 11-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AMS64_13480 bc82c6001f26df7a3fc07e84c82a9f1b 151 SUPERFAMILY SSF48695 35 147 1.13E-40 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AMS64_03125 b2d0fc1dfb16eb84c19dbb726bb9ec5b 132 Pfam PF10135 Rod binding protein 47 97 2.6E-11 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal AMS64_17680 f58312b95dcc611adea271c040560725 339 Gene3D G3DSA:3.90.550.10 2 211 9.7E-37 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_17680 f58312b95dcc611adea271c040560725 339 Pfam PF00535 Glycosyl transferase family 2 9 173 1.7E-33 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMS64_17680 f58312b95dcc611adea271c040560725 339 SUPERFAMILY SSF53448 6 260 2.01E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_03055 07ed24d136d91bdb1411ec3284b0e656 230 PRINTS PR01003 Flagellar assembly protein FliH signature 52 74 2.0E-6 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMS64_03055 07ed24d136d91bdb1411ec3284b0e656 230 PRINTS PR01003 Flagellar assembly protein FliH signature 181 197 2.0E-6 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMS64_03055 07ed24d136d91bdb1411ec3284b0e656 230 PRINTS PR01003 Flagellar assembly protein FliH signature 114 131 2.0E-6 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMS64_03055 07ed24d136d91bdb1411ec3284b0e656 230 PRINTS PR01003 Flagellar assembly protein FliH signature 75 93 2.0E-6 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMS64_03055 07ed24d136d91bdb1411ec3284b0e656 230 Pfam PF02108 Flagellar assembly protein FliH 98 216 2.5E-17 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AMS64_00750 982023ebd0d2c036f2851ecadaf51994 249 SUPERFAMILY SSF53335 19 243 9.21E-76 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMS64_00750 982023ebd0d2c036f2851ecadaf51994 249 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 244 39.854 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AMS64_00750 982023ebd0d2c036f2851ecadaf51994 249 Gene3D G3DSA:3.40.1630.10 1 52 3.2E-10 T 11-10-2018 AMS64_00750 982023ebd0d2c036f2851ecadaf51994 249 Pfam PF04445 Putative SAM-dependent methyltransferase 21 242 6.0E-105 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AMS64_00750 982023ebd0d2c036f2851ecadaf51994 249 Gene3D G3DSA:3.40.50.150 53 248 3.4E-78 T 11-10-2018 AMS64_10870 03c95f6f16b9cb1014cd79bfc5941ce1 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 411 1.4E-137 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AMS64_10870 03c95f6f16b9cb1014cd79bfc5941ce1 413 Pfam PF02687 FtsX-like permease family 299 403 2.6E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMS64_10870 03c95f6f16b9cb1014cd79bfc5941ce1 413 Pfam PF12704 MacB-like periplasmic core domain 29 200 5.7E-14 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AMS64_06485 c0f8aa3f3768c2ae0d522d38855299e7 242 Pfam PF07670 Nucleoside recognition 82 176 9.1E-11 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AMS64_11085 dfdf4480b8b2251d84181c8828d03710 120 Pfam PF11042 Protein of unknown function (DUF2750) 13 115 2.5E-35 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 AMS64_19775 1853d3c0bbfd0df2a1c3d6ea1f9919a8 166 SUPERFAMILY SSF56524 41 141 8.76E-16 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMS64_11935 38792cfaa19f7364a5585588df418d66 510 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 8.0E-142 T 11-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane AMS64_16155 736a48e78173d845d915e68981fae092 473 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 317 427 3.9E-23 T 11-10-2018 IPR025299 CstA, C-terminal domain AMS64_16155 736a48e78173d845d915e68981fae092 473 Pfam PF02554 Carbon starvation protein CstA 4 144 1.0E-32 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AMS64_16155 736a48e78173d845d915e68981fae092 473 Pfam PF02554 Carbon starvation protein CstA 152 279 7.8E-19 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AMS64_10965 ff2fcf38ea51ad6e5f1c070ab47ae3c8 459 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 19 368 3.3E-138 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMS64_10965 ff2fcf38ea51ad6e5f1c070ab47ae3c8 459 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 15 451 31.222 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMS64_10965 ff2fcf38ea51ad6e5f1c070ab47ae3c8 459 Pfam PF13742 OB-fold nucleic acid binding domain 18 111 1.8E-30 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AMS64_10965 ff2fcf38ea51ad6e5f1c070ab47ae3c8 459 Pfam PF02601 Exonuclease VII, large subunit 134 448 4.4E-98 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AMS64_07420 d976354cd3995f8aeab8ece2f3e4ffbf 162 Pfam PF01584 CheW-like domain 18 154 5.2E-40 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_07420 d976354cd3995f8aeab8ece2f3e4ffbf 162 Gene3D G3DSA:2.30.30.40 20 145 2.5E-43 T 11-10-2018 AMS64_07420 d976354cd3995f8aeab8ece2f3e4ffbf 162 SUPERFAMILY SSF50341 14 157 7.06E-42 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMS64_07420 d976354cd3995f8aeab8ece2f3e4ffbf 162 SMART SM00260 14 151 6.4E-49 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMS64_07420 d976354cd3995f8aeab8ece2f3e4ffbf 162 Gene3D G3DSA:2.40.50.180 37 146 2.5E-43 T 11-10-2018 AMS64_04895 9ce0e6399ab0a564b44c3a9f5803adf9 204 SUPERFAMILY SSF46689 8 92 5.13E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_04895 9ce0e6399ab0a564b44c3a9f5803adf9 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.1E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_04895 9ce0e6399ab0a564b44c3a9f5803adf9 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.1E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_04895 9ce0e6399ab0a564b44c3a9f5803adf9 204 SUPERFAMILY SSF48498 92 202 2.73E-14 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMS64_04895 9ce0e6399ab0a564b44c3a9f5803adf9 204 Gene3D G3DSA:1.10.357.10 1 198 1.8E-50 T 11-10-2018 AMS64_04895 9ce0e6399ab0a564b44c3a9f5803adf9 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 1.2E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_18540 43d6aab7b8a27cd007073c830d5d9684 909 Gene3D G3DSA:1.25.40.20 723 902 6.5E-28 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AMS64_18540 43d6aab7b8a27cd007073c830d5d9684 909 Pfam PF12796 Ankyrin repeats (3 copies) 749 813 3.8E-10 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain AMS64_18540 43d6aab7b8a27cd007073c830d5d9684 909 SUPERFAMILY SSF48403 330 860 1.48E-25 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AMS64_18540 43d6aab7b8a27cd007073c830d5d9684 909 SMART SM00248 755 784 0.0011 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMS64_18540 43d6aab7b8a27cd007073c830d5d9684 909 SMART SM00248 788 817 0.011 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMS64_18540 43d6aab7b8a27cd007073c830d5d9684 909 SMART SM00248 821 850 0.52 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMS64_05440 8c91d38f2d83dcc003e9c9335dec3f3f 89 SUPERFAMILY SSF109910 2 79 8.24E-27 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AMS64_05440 8c91d38f2d83dcc003e9c9335dec3f3f 89 Gene3D G3DSA:1.10.150.250 2 88 1.8E-32 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AMS64_05440 8c91d38f2d83dcc003e9c9335dec3f3f 89 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 7.6E-26 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase AMS64_22555 aba24fd60a9c426484b966e54311739c 229 Pfam PF08722 TnsA endonuclease N terminal 54 137 8.6E-14 T 11-10-2018 IPR014833 TnsA endonuclease, N-terminal AMS64_22555 aba24fd60a9c426484b966e54311739c 229 Pfam PF08721 TnsA endonuclease C terminal 140 213 1.3E-6 T 11-10-2018 IPR014832 TnsA endonuclease C-terminal AMS64_06000 9377482c37c5ff140ab047a5d02b8aca 301 Gene3D G3DSA:3.40.50.720 2 299 2.4E-81 T 11-10-2018 AMS64_06000 9377482c37c5ff140ab047a5d02b8aca 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 222 2.6E-25 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMS64_06000 9377482c37c5ff140ab047a5d02b8aca 301 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 7.9E-108 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 AMS64_06000 9377482c37c5ff140ab047a5d02b8aca 301 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 8.1E-20 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 AMS64_06000 9377482c37c5ff140ab047a5d02b8aca 301 SUPERFAMILY SSF51735 1 290 1.85E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_21915 965b67bbd95d02ad17941fe50f7a06d3 191 SUPERFAMILY SSF55083 3 101 1.7E-20 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_21915 965b67bbd95d02ad17941fe50f7a06d3 191 Gene3D G3DSA:3.30.70.560 2 114 1.6E-17 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_21915 965b67bbd95d02ad17941fe50f7a06d3 191 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 101 1.8E-14 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMS64_04005 a6543244e00d716302b157249da9281d 195 SUPERFAMILY SSF53474 4 193 5.94E-17 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_04005 a6543244e00d716302b157249da9281d 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 5 193 1.9E-56 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AMS64_04005 a6543244e00d716302b157249da9281d 195 Gene3D G3DSA:3.40.50.1820 3 195 3.3E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_13215 e98d5880d4f3f96770179d3f0b1459c0 217 SUPERFAMILY SSF55821 8 210 1.44E-84 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMS64_13215 e98d5880d4f3f96770179d3f0b1459c0 217 Gene3D G3DSA:3.90.870.10 1 216 2.3E-92 T 11-10-2018 AMS64_13215 e98d5880d4f3f96770179d3f0b1459c0 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 2.6E-83 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_13215 e98d5880d4f3f96770179d3f0b1459c0 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 4.6E-81 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_13215 e98d5880d4f3f96770179d3f0b1459c0 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 42.427 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMS64_11095 0fb6ea5470f6146984a6520f5990a2c5 130 Pfam PF01124 MAPEG family 5 123 1.3E-26 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMS64_11095 0fb6ea5470f6146984a6520f5990a2c5 130 SUPERFAMILY SSF161084 2 124 2.62E-25 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMS64_11095 0fb6ea5470f6146984a6520f5990a2c5 130 Gene3D G3DSA:1.20.120.550 1 129 2.1E-21 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMS64_22005 5f818edd2865b165fd52c9e217012f13 101 Pfam PF08986 Domain of unknown function (DUF1889) 7 88 7.8E-7 T 11-10-2018 IPR015079 Protein of unknown function DUF1889 AMS64_22005 5f818edd2865b165fd52c9e217012f13 101 Gene3D G3DSA:1.20.1290.30 2 101 2.6E-27 T 11-10-2018 IPR037210 YoaC-like superfamily AMS64_22005 5f818edd2865b165fd52c9e217012f13 101 SUPERFAMILY SSF140670 19 89 3.79E-10 T 11-10-2018 IPR037210 YoaC-like superfamily AMS64_07190 6259138b73ede43db0d484133fb1dfd8 135 Gene3D G3DSA:2.60.120.380 25 133 1.1E-29 T 11-10-2018 AMS64_08825 b9006cc8146af1d539f21cec32fcf917 88 Pfam PF03776 Septum formation topological specificity factor MinE 15 82 3.2E-26 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AMS64_08825 b9006cc8146af1d539f21cec32fcf917 88 Gene3D G3DSA:3.30.1070.10 21 81 1.4E-28 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AMS64_08825 b9006cc8146af1d539f21cec32fcf917 88 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 3.5E-32 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AMS64_08825 b9006cc8146af1d539f21cec32fcf917 88 SUPERFAMILY SSF55229 34 84 1.57E-16 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AMS64_08825 b9006cc8146af1d539f21cec32fcf917 88 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 20.517 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AMS64_19700 b861efff0a0c6ea556c5a31a914787da 199 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 1.8E-92 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AMS64_19700 b861efff0a0c6ea556c5a31a914787da 199 Gene3D G3DSA:3.20.19.10 1 180 3.4E-76 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AMS64_19700 b861efff0a0c6ea556c5a31a914787da 199 Pfam PF00694 Aconitase C-terminal domain 1 125 1.1E-38 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AMS64_19700 b861efff0a0c6ea556c5a31a914787da 199 SUPERFAMILY SSF52016 1 195 6.67E-62 T 11-10-2018 AMS64_19700 b861efff0a0c6ea556c5a31a914787da 199 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.808 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AMS64_04760 632e3e28df36bb5376f9e7fec3ed18e0 176 SUPERFAMILY SSF50324 6 174 3.27E-65 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMS64_04760 632e3e28df36bb5376f9e7fec3ed18e0 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.8E-53 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMS64_04760 632e3e28df36bb5376f9e7fec3ed18e0 176 Gene3D G3DSA:3.90.80.10 1 175 1.6E-68 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMS64_04760 632e3e28df36bb5376f9e7fec3ed18e0 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.407 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMS64_04760 632e3e28df36bb5376f9e7fec3ed18e0 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMS64_02300 ea94a085db44f8d4d6c0ef441efd3c79 258 SMART SM00062 20 245 0.0012 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_02300 ea94a085db44f8d4d6c0ef441efd3c79 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 241 4.5E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_02300 ea94a085db44f8d4d6c0ef441efd3c79 258 SUPERFAMILY SSF53850 24 243 3.91E-30 T 11-10-2018 AMS64_02300 ea94a085db44f8d4d6c0ef441efd3c79 258 Gene3D G3DSA:3.40.190.10 27 241 6.2E-23 T 11-10-2018 AMS64_02300 ea94a085db44f8d4d6c0ef441efd3c79 258 Gene3D G3DSA:3.40.190.10 106 202 6.2E-23 T 11-10-2018 AMS64_04070 4b1ce58a0ba9741d9654dabc2799194a 171 SUPERFAMILY SSF52833 35 162 1.25E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_04070 4b1ce58a0ba9741d9654dabc2799194a 171 Pfam PF00578 AhpC/TSA family 48 148 1.7E-11 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMS64_04070 4b1ce58a0ba9741d9654dabc2799194a 171 Gene3D G3DSA:3.40.30.10 35 163 1.9E-20 T 11-10-2018 AMS64_16020 ca45680639f48f7c84f668dcae12ad12 92 SUPERFAMILY SSF54534 3 89 6.41E-26 T 11-10-2018 AMS64_16020 ca45680639f48f7c84f668dcae12ad12 92 Gene3D G3DSA:3.10.50.40 1 92 3.8E-33 T 11-10-2018 AMS64_16020 ca45680639f48f7c84f668dcae12ad12 92 Pfam PF00639 PPIC-type PPIASE domain 12 88 7.9E-19 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AMS64_05645 c6dc6de009501365a78991cbab3443d1 150 Pfam PF00588 SpoU rRNA Methylase family 9 140 2.6E-17 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMS64_05645 c6dc6de009501365a78991cbab3443d1 150 SUPERFAMILY SSF75217 7 143 8.9E-26 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMS64_05645 c6dc6de009501365a78991cbab3443d1 150 Gene3D G3DSA:3.40.1280.10 8 147 4.8E-16 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMS64_01860 334923ec869007d130d3d1f74634572b 213 Gene3D G3DSA:3.20.20.70 1 213 3.3E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMS64_01860 334923ec869007d130d3d1f74634572b 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 210 4.4E-83 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMS64_01860 334923ec869007d130d3d1f74634572b 213 SUPERFAMILY SSF51569 3 212 4.03E-71 T 11-10-2018 AMS64_01860 334923ec869007d130d3d1f74634572b 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMS64_01860 334923ec869007d130d3d1f74634572b 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMS64_01860 334923ec869007d130d3d1f74634572b 213 Pfam PF01081 KDPG and KHG aldolase 12 203 1.3E-76 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMS64_10065 24792632e004a3cddafeb58e192a5547 391 SUPERFAMILY SSF53901 2 262 3.12E-73 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_10065 24792632e004a3cddafeb58e192a5547 391 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AMS64_10065 24792632e004a3cddafeb58e192a5547 391 PIRSF PIRSF000429 1 388 1.5E-109 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMS64_10065 24792632e004a3cddafeb58e192a5547 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AMS64_10065 24792632e004a3cddafeb58e192a5547 391 SUPERFAMILY SSF53901 266 386 7.74E-37 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_10065 24792632e004a3cddafeb58e192a5547 391 Pfam PF00108 Thiolase, N-terminal domain 3 255 9.2E-84 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMS64_10065 24792632e004a3cddafeb58e192a5547 391 Gene3D G3DSA:3.40.47.10 125 383 1.6E-134 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_10065 24792632e004a3cddafeb58e192a5547 391 Pfam PF02803 Thiolase, C-terminal domain 265 385 5.8E-39 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMS64_10065 24792632e004a3cddafeb58e192a5547 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 385 1.4E-122 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMS64_10065 24792632e004a3cddafeb58e192a5547 391 Gene3D G3DSA:3.40.47.10 5 270 1.6E-134 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMS64_07450 838ae0884362b82d5a3f464657cea1e5 163 SUPERFAMILY SSF82093 30 143 1.02E-38 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 AMS64_07450 838ae0884362b82d5a3f464657cea1e5 163 Gene3D G3DSA:2.40.50.140 30 144 1.3E-40 T 11-10-2018 AMS64_07450 838ae0884362b82d5a3f464657cea1e5 163 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 148 31.603 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AMS64_07450 838ae0884362b82d5a3f464657cea1e5 163 Pfam PF03100 CcmE 4 138 5.7E-45 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AMS64_03085 6e4db057d8f2fd2363a5319fd5a47b5b 129 PIRSF PIRSF002889 1 129 1.4E-32 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AMS64_03085 6e4db057d8f2fd2363a5319fd5a47b5b 129 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 127 9.6E-29 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AMS64_02705 a15c5df8a88389e7fbbb4458c9c5fd4f 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 3 103 2.7E-40 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AMS64_02705 a15c5df8a88389e7fbbb4458c9c5fd4f 104 Pfam PF01491 Frataxin-like domain 1 101 9.5E-26 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AMS64_02705 a15c5df8a88389e7fbbb4458c9c5fd4f 104 SUPERFAMILY SSF55387 1 103 4.71E-34 T 11-10-2018 AMS64_02705 a15c5df8a88389e7fbbb4458c9c5fd4f 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 11-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AMS64_02705 a15c5df8a88389e7fbbb4458c9c5fd4f 104 SMART SM01219 1 104 5.4E-50 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AMS64_02705 a15c5df8a88389e7fbbb4458c9c5fd4f 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 25.449 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AMS64_02705 a15c5df8a88389e7fbbb4458c9c5fd4f 104 Gene3D G3DSA:3.30.920.10 1 104 1.1E-36 T 11-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AMS64_08790 31249498994e7356534f301f529a38a8 154 Gene3D G3DSA:1.10.10.10 3 145 9.8E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_08790 31249498994e7356534f301f529a38a8 154 Pfam PF12802 MarR family 36 93 3.7E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_08790 31249498994e7356534f301f529a38a8 154 SMART SM00347 30 129 6.5E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_08790 31249498994e7356534f301f529a38a8 154 SUPERFAMILY SSF46785 8 147 4.36E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_08790 31249498994e7356534f301f529a38a8 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 1.7E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_08790 31249498994e7356534f301f529a38a8 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 1.7E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_08790 31249498994e7356534f301f529a38a8 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 1.7E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMS64_20080 2ae60d78a74c650e28b5d381b8e96c32 206 Pfam PF10144 Bacterial virulence factor haemolysin 17 152 1.2E-17 T 11-10-2018 IPR019305 Uncharacterised protein family Smp AMS64_19525 f446800c3f6d1ce45678b9ca292e5b0c 299 Pfam PF03466 LysR substrate binding domain 87 291 2.9E-38 T 11-10-2018 IPR005119 LysR, substrate-binding AMS64_19525 f446800c3f6d1ce45678b9ca292e5b0c 299 SUPERFAMILY SSF46785 1 86 1.88E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_19525 f446800c3f6d1ce45678b9ca292e5b0c 299 SUPERFAMILY SSF53850 86 295 5.97E-40 T 11-10-2018 AMS64_19525 f446800c3f6d1ce45678b9ca292e5b0c 299 Gene3D G3DSA:1.10.10.10 1 88 1.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_19525 f446800c3f6d1ce45678b9ca292e5b0c 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.9E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMS64_19525 f446800c3f6d1ce45678b9ca292e5b0c 299 Gene3D G3DSA:3.40.190.290 90 291 2.9E-50 T 11-10-2018 AMS64_12510 3fa7a201f7b1bf1e805873fbe146c769 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 1.5E-108 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMS64_12510 3fa7a201f7b1bf1e805873fbe146c769 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 361 3.8E-84 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMS64_12510 3fa7a201f7b1bf1e805873fbe146c769 379 PIRSF PIRSF000267 1 378 1.1E-105 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMS64_13055 0e7775b1934b1a9f3552f139fe0acfde 117 Gene3D G3DSA:2.40.50.320 44 117 7.0E-23 T 11-10-2018 AMS64_13055 0e7775b1934b1a9f3552f139fe0acfde 117 Pfam PF11604 Copper binding periplasmic protein CusF 50 116 2.4E-26 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF AMS64_21125 382a1b8cd6c7f99c1bfafa789d31413f 180 Gene3D G3DSA:3.40.630.30 4 178 8.9E-40 T 11-10-2018 AMS64_21125 382a1b8cd6c7f99c1bfafa789d31413f 180 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 3.2E-20 T 11-10-2018 IPR000182 GNAT domain AMS64_21125 382a1b8cd6c7f99c1bfafa789d31413f 180 SUPERFAMILY SSF55729 6 177 4.29E-38 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_21590 b0737259b46b03c31de89be51e7925dc 100 Gene3D G3DSA:3.30.70.860 1 100 7.5E-33 T 11-10-2018 IPR035571 UPF0234-like, C-terminal AMS64_21590 b0737259b46b03c31de89be51e7925dc 100 Pfam PF04175 Protein of unknown function (DUF406) 10 98 2.8E-29 T 11-10-2018 IPR005272 Conserved hypothetical protein CHP00743 AMS64_10480 f50c83d354773ef95f1c2e7b3681ac2a 222 Gene3D G3DSA:3.40.50.300 8 185 5.7E-22 T 11-10-2018 AMS64_10480 f50c83d354773ef95f1c2e7b3681ac2a 222 SUPERFAMILY SSF52540 24 184 2.31E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10115 37e44ef2861d165b3447de027c917439 173 Pfam PF14316 Domain of unknown function (DUF4381) 13 156 5.5E-18 T 11-10-2018 IPR025489 Protein of unknown function (DUF4381 AMS64_07995 90d0d903b14bf8e2df8795a54068afc1 343 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 80 336 1.7E-75 T 11-10-2018 IPR006507 Uncharacterised protein family UPF0283 AMS64_07995 90d0d903b14bf8e2df8795a54068afc1 343 Pfam PF05128 Domain of unknown function (DUF697) 178 336 9.4E-55 T 11-10-2018 IPR021147 Protein of unknown function DUF697 AMS64_14695 7198ee6b97a991ee3bdbb71d3308a6e0 230 SUPERFAMILY SSF161098 10 210 1.44E-43 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_14695 7198ee6b97a991ee3bdbb71d3308a6e0 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 116 7.0E-23 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMS64_14695 7198ee6b97a991ee3bdbb71d3308a6e0 230 Gene3D G3DSA:1.10.3720.10 1 224 1.9E-55 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_14695 7198ee6b97a991ee3bdbb71d3308a6e0 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 216 1.3E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_00945 1071fb598e65f4901f0af20e114b31ba 440 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 440 58.387 T 11-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 AMS64_00945 1071fb598e65f4901f0af20e114b31ba 440 SUPERFAMILY SSF55920 161 436 1.44E-53 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AMS64_00945 1071fb598e65f4901f0af20e114b31ba 440 Pfam PF00557 Metallopeptidase family M24 166 427 2.2E-44 T 11-10-2018 IPR000994 Peptidase M24 AMS64_00945 1071fb598e65f4901f0af20e114b31ba 440 Gene3D G3DSA:3.40.350.10 1 157 1.7E-58 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMS64_00945 1071fb598e65f4901f0af20e114b31ba 440 Gene3D G3DSA:3.90.230.10 159 438 6.6E-76 T 11-10-2018 AMS64_00945 1071fb598e65f4901f0af20e114b31ba 440 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 333 345 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AMS64_18405 6cea8e68d8efa5b720ec99936859476a 116 SUPERFAMILY SSF47413 9 82 8.04E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_18405 6cea8e68d8efa5b720ec99936859476a 116 Pfam PF01381 Helix-turn-helix 19 71 7.2E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_18405 6cea8e68d8efa5b720ec99936859476a 116 Gene3D G3DSA:1.10.260.40 3 78 2.5E-15 T 11-10-2018 AMS64_18405 6cea8e68d8efa5b720ec99936859476a 116 SMART SM00530 16 71 7.2E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_11235 ff2cd6735a9ca4ba0cdad238f98922bd 849 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 538 821 6.1E-92 T 11-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal AMS64_11235 ff2cd6735a9ca4ba0cdad238f98922bd 849 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 18 292 1.3E-16 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AMS64_11235 ff2cd6735a9ca4ba0cdad238f98922bd 849 SUPERFAMILY SSF55729 641 819 2.68E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_15830 80b6a7dc3d62ca22d87763d364ba6a8d 138 SUPERFAMILY SSF140566 2 110 1.83E-16 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 AMS64_15830 80b6a7dc3d62ca22d87763d364ba6a8d 138 Pfam PF05130 FlgN protein 2 128 4.1E-19 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AMS64_00315 a8eb74198e21911bd5557e274433dbcf 198 SUPERFAMILY SSF46689 4 65 1.5E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_00315 a8eb74198e21911bd5557e274433dbcf 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 8.4E-17 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_00315 a8eb74198e21911bd5557e274433dbcf 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_00315 a8eb74198e21911bd5557e274433dbcf 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_00315 a8eb74198e21911bd5557e274433dbcf 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMS64_00315 a8eb74198e21911bd5557e274433dbcf 198 Gene3D G3DSA:1.10.357.10 2 187 1.7E-47 T 11-10-2018 AMS64_14750 01e39764bbeaf65f58382dd1365ebfe8 160 ProSitePatterns PS00194 Thioredoxin family active site. 51 69 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMS64_14750 01e39764bbeaf65f58382dd1365ebfe8 160 Pfam PF00578 AhpC/TSA family 28 135 8.6E-11 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMS64_14750 01e39764bbeaf65f58382dd1365ebfe8 160 SUPERFAMILY SSF52833 22 148 1.43E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_14750 01e39764bbeaf65f58382dd1365ebfe8 160 Gene3D G3DSA:3.40.30.10 22 158 9.4E-29 T 11-10-2018 AMS64_04630 167984e87bc8ecb4942e99f1c2e775ce 128 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 5 126 2.0E-50 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AMS64_04630 167984e87bc8ecb4942e99f1c2e775ce 128 Pfam PF01641 SelR domain 8 126 8.8E-51 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AMS64_04630 167984e87bc8ecb4942e99f1c2e775ce 128 SUPERFAMILY SSF51316 5 126 1.4E-55 T 11-10-2018 IPR011057 Mss4-like superfamily AMS64_04630 167984e87bc8ecb4942e99f1c2e775ce 128 Gene3D G3DSA:2.170.150.20 1 128 5.6E-57 T 11-10-2018 AMS64_16665 190c4034a897afc207e7fa6e5b9eec12 142 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 1.2E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_16665 190c4034a897afc207e7fa6e5b9eec12 142 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_16665 190c4034a897afc207e7fa6e5b9eec12 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 3.8E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_18310 1536fcecdd57a7400288c3ee7a671829 419 Gene3D G3DSA:3.90.660.20 34 290 3.4E-21 T 11-10-2018 AMS64_18310 1536fcecdd57a7400288c3ee7a671829 419 SUPERFAMILY SSF51905 3 414 4.73E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_18310 1536fcecdd57a7400288c3ee7a671829 419 Gene3D G3DSA:1.10.3110.10 109 199 3.4E-21 T 11-10-2018 AMS64_18310 1536fcecdd57a7400288c3ee7a671829 419 Gene3D G3DSA:3.50.50.60 6 288 3.4E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_18310 1536fcecdd57a7400288c3ee7a671829 419 Pfam PF01593 Flavin containing amine oxidoreductase 12 289 1.9E-15 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMS64_20145 c855de78a348a1fbcd2c97ef22434c7f 165 Pfam PF12019 Type II transport protein GspH 42 153 8.7E-16 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AMS64_20145 c855de78a348a1fbcd2c97ef22434c7f 165 Gene3D G3DSA:3.30.700.10 6 163 1.1E-8 T 11-10-2018 AMS64_20145 c855de78a348a1fbcd2c97ef22434c7f 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 8.2E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_20145 c855de78a348a1fbcd2c97ef22434c7f 165 SUPERFAMILY SSF54523 6 126 1.1E-12 T 11-10-2018 AMS64_20145 c855de78a348a1fbcd2c97ef22434c7f 165 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 1.3E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_08755 f83fe53d3563053858ed77d1e0382c8c 67 Pfam PF14255 Cysteine-rich CPXCG 9 59 8.0E-22 T 11-10-2018 IPR025990 Cysteine-rich CPXCG protein AMS64_08755 f83fe53d3563053858ed77d1e0382c8c 67 PIRSF PIRSF037225 1 65 8.5E-24 T 11-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 AMS64_04210 2ac0b7a86e00052b9e32f0556437ffa5 90 SUPERFAMILY SSF111148 1 89 4.97E-39 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AMS64_04210 2ac0b7a86e00052b9e32f0556437ffa5 90 PIRSF PIRSF029827 1 90 4.4E-41 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AMS64_04210 2ac0b7a86e00052b9e32f0556437ffa5 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.167 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AMS64_04210 2ac0b7a86e00052b9e32f0556437ffa5 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 7.3E-40 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AMS64_04210 2ac0b7a86e00052b9e32f0556437ffa5 90 Gene3D G3DSA:1.10.3880.10 1 90 2.3E-38 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AMS64_04210 2ac0b7a86e00052b9e32f0556437ffa5 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 9.0E-33 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AMS64_05300 b18d391885c2b0b80d4f6f00ead55fd2 720 Pfam PF05170 AsmA family 4 604 2.1E-76 T 11-10-2018 IPR007844 AsmA AMS64_18115 52025e0c6a45311b282d63c44ee006b4 261 PIRSF PIRSF029037 1 261 3.3E-104 T 11-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 AMS64_18115 52025e0c6a45311b282d63c44ee006b4 261 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 259 2.6E-111 T 11-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 AMS64_05570 b2a023eadc64d1562ae11909ce76da35 82 PIRSF PIRSF031804 1 82 1.3E-27 T 11-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 AMS64_05570 b2a023eadc64d1562ae11909ce76da35 82 Pfam PF06803 Protein of unknown function (DUF1232) 25 59 7.1E-14 T 11-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 AMS64_00365 f4bde4ef61dbe9b7ba78c1068e19dc25 375 Gene3D G3DSA:1.20.1720.10 8 371 1.6E-72 T 11-10-2018 AMS64_00365 f4bde4ef61dbe9b7ba78c1068e19dc25 375 Pfam PF07690 Major Facilitator Superfamily 21 345 5.2E-33 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_00365 f4bde4ef61dbe9b7ba78c1068e19dc25 375 SUPERFAMILY SSF103473 6 370 1.83E-45 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_13550 746bf6e15be3d7e7e8dca0dbcfc43067 269 SUPERFAMILY SSF56235 2 253 5.29E-50 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_13550 746bf6e15be3d7e7e8dca0dbcfc43067 269 Gene3D G3DSA:3.60.20.10 1 259 1.4E-98 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMS64_13550 746bf6e15be3d7e7e8dca0dbcfc43067 269 Pfam PF13230 Glutamine amidotransferases class-II 1 263 4.5E-112 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 AMS64_15780 2d0d1726cfa204dfa154357c9a3bc4d7 262 Pfam PF00460 Flagella basal body rod protein 5 35 1.1E-11 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMS64_15780 2d0d1726cfa204dfa154357c9a3bc4d7 262 SUPERFAMILY SSF117143 92 223 6.28E-35 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMS64_15780 2d0d1726cfa204dfa154357c9a3bc4d7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 8.9E-30 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMS64_15780 2d0d1726cfa204dfa154357c9a3bc4d7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 2.6E-43 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMS64_15780 2d0d1726cfa204dfa154357c9a3bc4d7 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 1.6E-23 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMS64_15780 2d0d1726cfa204dfa154357c9a3bc4d7 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 1.9E-110 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AMS64_15780 2d0d1726cfa204dfa154357c9a3bc4d7 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Gene3D G3DSA:3.10.560.10 579 672 1.7E-18 T 11-10-2018 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Gene3D G3DSA:3.10.560.10 201 284 3.0E-14 T 11-10-2018 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Gene3D G3DSA:3.10.560.10 383 473 1.9E-13 T 11-10-2018 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Gene3D G3DSA:3.10.560.10 285 373 1.4E-16 T 11-10-2018 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Gene3D G3DSA:3.10.560.10 481 575 2.1E-13 T 11-10-2018 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Gene3D G3DSA:3.10.560.10 96 179 3.5E-14 T 11-10-2018 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Pfam PF02563 Polysaccharide biosynthesis/export protein 26 95 3.8E-11 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Gene3D G3DSA:3.30.1950.10 29 95 1.8E-5 T 11-10-2018 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Pfam PF10531 SLBB domain 391 434 1.2E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Pfam PF10531 SLBB domain 296 348 9.4E-9 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Pfam PF10531 SLBB domain 102 148 2.5E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Pfam PF10531 SLBB domain 589 635 7.6E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Pfam PF10531 SLBB domain 494 541 5.7E-4 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_10485 1f5b9753d760d2ef992efe237ccb0b75 701 Pfam PF10531 SLBB domain 208 250 9.9E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMS64_06530 8124e866d4e55102d9c7bbe91ad66263 273 SUPERFAMILY SSF51261 129 268 1.1E-47 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_06530 8124e866d4e55102d9c7bbe91ad66263 273 Pfam PF01551 Peptidase family M23 170 264 1.8E-27 T 11-10-2018 IPR016047 Peptidase M23 AMS64_06530 8124e866d4e55102d9c7bbe91ad66263 273 Gene3D G3DSA:2.70.70.10 116 273 7.1E-57 T 11-10-2018 IPR011055 Duplicated hybrid motif AMS64_06530 8124e866d4e55102d9c7bbe91ad66263 273 Gene3D G3DSA:2.60.40.1590 20 115 7.4E-31 T 11-10-2018 AMS64_00390 1178bbf32a7bb49b454d2c5328994ddc 256 SUPERFAMILY SSF56281 1 241 9.43E-20 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_00390 1178bbf32a7bb49b454d2c5328994ddc 256 Gene3D G3DSA:3.60.15.10 1 255 2.3E-70 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMS64_00390 1178bbf32a7bb49b454d2c5328994ddc 256 Pfam PF13483 Beta-lactamase superfamily domain 3 208 1.5E-12 T 11-10-2018 AMS64_10405 bf52977b3b7e9fd70a352c34856f1884 439 Pfam PF13440 Polysaccharide biosynthesis protein 31 259 4.4E-15 T 11-10-2018 AMS64_14995 5fe80a29b7397f6af1fbeb9c1a69137d 398 SUPERFAMILY SSF103473 4 388 3.4E-57 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_14995 5fe80a29b7397f6af1fbeb9c1a69137d 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 385 2.0E-60 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AMS64_14995 5fe80a29b7397f6af1fbeb9c1a69137d 398 Gene3D G3DSA:1.20.1720.10 9 386 3.5E-100 T 11-10-2018 AMS64_14995 5fe80a29b7397f6af1fbeb9c1a69137d 398 Pfam PF07690 Major Facilitator Superfamily 14 352 3.8E-45 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_17590 9e09016db684f31e4335b6c79ded1847 351 Gene3D G3DSA:2.40.50.100 45 233 3.9E-35 T 11-10-2018 AMS64_17590 9e09016db684f31e4335b6c79ded1847 351 Pfam PF13533 Biotin-lipoyl like 44 88 1.6E-14 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMS64_17590 9e09016db684f31e4335b6c79ded1847 351 Pfam PF13437 HlyD family secretion protein 200 278 4.3E-5 T 11-10-2018 AMS64_17590 9e09016db684f31e4335b6c79ded1847 351 Gene3D G3DSA:1.10.287.470 77 199 3.9E-35 T 11-10-2018 AMS64_17590 9e09016db684f31e4335b6c79ded1847 351 SUPERFAMILY SSF111369 44 169 1.7E-12 T 11-10-2018 AMS64_17590 9e09016db684f31e4335b6c79ded1847 351 Gene3D G3DSA:2.40.30.170 234 277 3.9E-35 T 11-10-2018 AMS64_07335 932c934dce8a578e5bbcfb0eb6077a39 126 Pfam PF04347 Flagellar biosynthesis protein, FliO 46 120 7.1E-19 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AMS64_07335 932c934dce8a578e5bbcfb0eb6077a39 126 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 34 100 6.0E-21 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AMS64_13255 d2408b376fd05a00d893ce451d6e1ec2 70 Gene3D G3DSA:2.30.30.320 1 70 2.8E-20 T 11-10-2018 IPR037135 DUF1653-like domain superfamily AMS64_13255 d2408b376fd05a00d893ce451d6e1ec2 70 Pfam PF07866 Protein of unknown function (DUF1653) 8 66 7.1E-23 T 11-10-2018 IPR023387 DUF1653-like domain AMS64_20120 61904ca19362257d7dbd9dad59662d3e 208 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 4.2E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_20120 61904ca19362257d7dbd9dad59662d3e 208 Gene3D G3DSA:3.30.700.10 9 156 1.4E-12 T 11-10-2018 AMS64_20120 61904ca19362257d7dbd9dad59662d3e 208 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 7.4E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_20120 61904ca19362257d7dbd9dad59662d3e 208 SUPERFAMILY SSF54523 9 98 1.02E-13 T 11-10-2018 AMS64_20810 ad7e31121ccc471f3f360f1bb11741ba 469 Pfam PF03553 Na+/H+ antiporter family 163 454 1.3E-61 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AMS64_20810 ad7e31121ccc471f3f360f1bb11741ba 469 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 9 458 2.4E-164 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 AMS64_07070 328f79b27b32e822e4f0343151985be6 250 Pfam PF09836 Putative DNA-binding domain 6 97 2.2E-19 T 11-10-2018 IPR018640 Putative DNA-binding domain, bacteria AMS64_02240 a8111b34dc33ee3a6bacd4530d04d83a 146 Pfam PF09980 Predicted membrane protein (DUF2214) 5 140 2.5E-23 T 11-10-2018 IPR018706 Protein of unknown function DUF2214, membrane AMS64_17130 b619347fe53f1124ba4794a36ca3457c 254 Gene3D G3DSA:3.40.830.10 1 254 2.5E-75 T 11-10-2018 AMS64_17130 b619347fe53f1124ba4794a36ca3457c 254 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 34 242 5.1E-27 T 11-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AMS64_17130 b619347fe53f1124ba4794a36ca3457c 254 SUPERFAMILY SSF53213 4 254 1.57E-71 T 11-10-2018 AMS64_17130 b619347fe53f1124ba4794a36ca3457c 254 PIRSF PIRSF006157 1 254 4.3E-70 T 11-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 AMS64_04725 2d35335f17adba4e61525896e048f14d 415 Pfam PF12704 MacB-like periplasmic core domain 17 203 7.6E-11 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AMS64_04725 2d35335f17adba4e61525896e048f14d 415 Pfam PF02687 FtsX-like permease family 313 406 1.3E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMS64_09390 06c13c6a46e0313a92ff4fa825c1ad27 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 1.8E-52 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMS64_11035 bcf869c11e593a8d6865d1ec5362d3a9 250 SUPERFAMILY SSF52402 1 243 5.65E-78 T 11-10-2018 AMS64_11035 bcf869c11e593a8d6865d1ec5362d3a9 250 Pfam PF01012 Electron transfer flavoprotein domain 30 203 4.5E-43 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMS64_11035 bcf869c11e593a8d6865d1ec5362d3a9 250 SMART SM00893 23 211 5.3E-57 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMS64_11035 bcf869c11e593a8d6865d1ec5362d3a9 250 Gene3D G3DSA:3.40.50.620 1 247 5.4E-82 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_11035 bcf869c11e593a8d6865d1ec5362d3a9 250 PIRSF PIRSF000090 1 249 1.1E-75 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AMS64_11035 bcf869c11e593a8d6865d1ec5362d3a9 250 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 11-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AMS64_02280 0ef390e5d0cb95cac93a8bd4b16a87a7 249 Pfam PF03280 Proteobacterial lipase chaperone protein 57 230 4.5E-18 T 11-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 AMS64_02280 0ef390e5d0cb95cac93a8bd4b16a87a7 249 SUPERFAMILY SSF158855 37 241 9.42E-37 T 11-10-2018 AMS64_13560 843e5cd5348e8bd07856f20504eaa867 818 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 1.5E-11 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMS64_13560 843e5cd5348e8bd07856f20504eaa867 818 SUPERFAMILY SSF47203 361 508 9.99E-22 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMS64_13560 843e5cd5348e8bd07856f20504eaa867 818 Pfam PF09317 Domain of unknown function (DUF1974) 515 797 3.0E-114 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AMS64_13560 843e5cd5348e8bd07856f20504eaa867 818 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 138 233 2.0E-15 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMS64_13560 843e5cd5348e8bd07856f20504eaa867 818 Gene3D G3DSA:1.10.540.10 123 236 1.1E-98 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMS64_13560 843e5cd5348e8bd07856f20504eaa867 818 Gene3D G3DSA:2.40.110.10 237 360 1.1E-98 T 11-10-2018 AMS64_13560 843e5cd5348e8bd07856f20504eaa867 818 Gene3D G3DSA:1.20.140.10 361 508 1.1E-98 T 11-10-2018 AMS64_13560 843e5cd5348e8bd07856f20504eaa867 818 SUPERFAMILY SSF56645 121 356 7.2E-43 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMS64_12695 f5954f7fe4366021cec8b32f0c763496 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 117 8.5E-34 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AMS64_12695 f5954f7fe4366021cec8b32f0c763496 126 Gene3D G3DSA:1.10.3830.10 4 122 2.2E-38 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AMS64_12695 f5954f7fe4366021cec8b32f0c763496 126 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 71 82 - T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AMS64_18795 4d8c70eacdf93bbf8b6154a4d2d1b33b 108 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 72 3.4E-26 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMS64_18795 4d8c70eacdf93bbf8b6154a4d2d1b33b 108 Pfam PF03840 Preprotein translocase SecG subunit 4 71 2.5E-22 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMS64_18795 4d8c70eacdf93bbf8b6154a4d2d1b33b 108 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 9.5E-43 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMS64_18795 4d8c70eacdf93bbf8b6154a4d2d1b33b 108 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 9.5E-43 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMS64_18795 4d8c70eacdf93bbf8b6154a4d2d1b33b 108 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 9.5E-43 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMS64_18795 4d8c70eacdf93bbf8b6154a4d2d1b33b 108 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 9.5E-43 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMS64_00440 43cd8430c61337070d25b61361e81191 221 SUPERFAMILY SSF161098 13 203 2.62E-44 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_00440 43cd8430c61337070d25b61361e81191 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 217 1.2E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_00440 43cd8430c61337070d25b61361e81191 221 Gene3D G3DSA:1.10.3720.10 1 220 4.2E-52 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_00440 43cd8430c61337070d25b61361e81191 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 8.6E-26 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMS64_10600 4e0a0ccf5fd804e03920d0bddccf15bf 346 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 4 343 5.9E-65 T 11-10-2018 IPR013399 CRISPR-associated protein Csy3 AMS64_10600 4e0a0ccf5fd804e03920d0bddccf15bf 346 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 5 341 2.9E-62 T 11-10-2018 IPR013399 CRISPR-associated protein Csy3 AMS64_10760 1839d889d98f641f1dd25c4859df6696 83 Pfam PF04606 Ogr/Delta-like zinc finger 5 50 1.0E-13 T 11-10-2018 IPR007684 Zinc finger, Ogr/Delta-type AMS64_10020 64c82a67a315dd7fe6fbca25d173be74 179 Pfam PF14316 Domain of unknown function (DUF4381) 48 158 1.1E-10 T 11-10-2018 IPR025489 Protein of unknown function (DUF4381 AMS64_12935 1a682bbf2d1872b7b682e2e4bfb757ce 394 Gene3D G3DSA:3.40.50.1970 1 187 9.5E-54 T 11-10-2018 AMS64_12935 1a682bbf2d1872b7b682e2e4bfb757ce 394 Gene3D G3DSA:1.20.1090.10 189 394 4.6E-53 T 11-10-2018 AMS64_12935 1a682bbf2d1872b7b682e2e4bfb757ce 394 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 384 4.0E-103 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AMS64_12935 1a682bbf2d1872b7b682e2e4bfb757ce 394 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 263 283 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMS64_12935 1a682bbf2d1872b7b682e2e4bfb757ce 394 SUPERFAMILY SSF56796 4 393 3.4E-104 T 11-10-2018 AMS64_12935 1a682bbf2d1872b7b682e2e4bfb757ce 394 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 176 204 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMS64_03755 c33e73a54c0f69f9282b43b91a7e54b9 85 Pfam PF10387 Protein of unknown function (DUF2442) 5 74 3.2E-8 T 11-10-2018 IPR018841 Protein of unknown function DUF2442 AMS64_03755 c33e73a54c0f69f9282b43b91a7e54b9 85 SUPERFAMILY SSF143880 2 75 1.57E-13 T 11-10-2018 IPR036782 NE0471-like, N-terminal AMS64_20700 65f00d3281e407577129db29d8925f5c 423 Pfam PF03222 Tryptophan/tyrosine permease family 35 390 9.5E-9 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AMS64_03135 11f05108e301789b02702bd31bd0aa2f 305 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 191 2.7E-47 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AMS64_03135 11f05108e301789b02702bd31bd0aa2f 305 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 4.0E-13 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMS64_03135 11f05108e301789b02702bd31bd0aa2f 305 SUPERFAMILY SSF64518 1 304 3.53E-51 T 11-10-2018 AMS64_16595 4b295eb7c3c5ee22bf64a83cf8ca7596 268 SUPERFAMILY SSF53448 6 268 7.13E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_16595 4b295eb7c3c5ee22bf64a83cf8ca7596 268 Pfam PF13641 Glycosyltransferase like family 2 68 237 3.2E-6 T 11-10-2018 AMS64_16595 4b295eb7c3c5ee22bf64a83cf8ca7596 268 Gene3D G3DSA:3.90.550.10 3 248 1.8E-26 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMS64_02980 977c8e1e6234a46ccba41cb95c516615 190 Pfam PF11726 Inovirus Gp2 26 176 4.3E-21 T 11-10-2018 AMS64_17470 ee67465ae550c3636f1f95fc2c480494 322 Gene3D G3DSA:1.20.1420.30 35 310 3.6E-88 T 11-10-2018 AMS64_17470 ee67465ae550c3636f1f95fc2c480494 322 Gene3D G3DSA:1.20.58.1130 9 205 3.6E-88 T 11-10-2018 AMS64_17470 ee67465ae550c3636f1f95fc2c480494 322 Pfam PF01699 Sodium/calcium exchanger protein 173 316 1.6E-31 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMS64_17470 ee67465ae550c3636f1f95fc2c480494 322 Pfam PF01699 Sodium/calcium exchanger protein 4 144 3.0E-23 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMS64_17470 ee67465ae550c3636f1f95fc2c480494 322 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 312 3.3E-73 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AMS64_02635 f692947f28d77cba5ba83f5a4971cb25 345 Pfam PF01757 Acyltransferase family 5 328 4.7E-23 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMS64_04060 e294a31566127a67ece16b30423d45e8 292 SUPERFAMILY SSF51735 1 153 2.56E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_04060 e294a31566127a67ece16b30423d45e8 292 SUPERFAMILY SSF48179 161 289 3.29E-5 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMS64_04060 e294a31566127a67ece16b30423d45e8 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 156 1.9E-20 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AMS64_04060 e294a31566127a67ece16b30423d45e8 292 Gene3D G3DSA:1.10.1040.10 159 287 7.6E-25 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMS64_04060 e294a31566127a67ece16b30423d45e8 292 Gene3D G3DSA:3.40.50.720 2 156 5.1E-36 T 11-10-2018 AMS64_04060 e294a31566127a67ece16b30423d45e8 292 PIRSF PIRSF000103 1 292 1.0E-38 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AMS64_09240 3d9fbd0a409e74ba3ca87f91591a5ddf 267 Pfam PF03609 PTS system sorbose-specific iic component 3 241 1.3E-67 T 11-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AMS64_20235 c4e4fe73d07d456860282092ab8cf154 274 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 143 155 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMS64_20235 c4e4fe73d07d456860282092ab8cf154 274 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 9 264 3.3E-90 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMS64_20235 c4e4fe73d07d456860282092ab8cf154 274 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 11 263 20.349 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMS64_20235 c4e4fe73d07d456860282092ab8cf154 274 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 14 257 6.1E-84 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMS64_09365 165d1fcb0a11affbe2fe0ad374efdc2e 158 SUPERFAMILY SSF56524 35 158 1.12E-14 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMS64_17520 08337a7a1e4f6b7f83cc191d61d5a86a 268 Gene3D G3DSA:3.30.2010.10 51 140 5.7E-7 T 11-10-2018 AMS64_17520 08337a7a1e4f6b7f83cc191d61d5a86a 268 Pfam PF01435 Peptidase family M48 66 245 2.9E-40 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMS64_01675 cdd42d4fb14002f3ef26cded91136c6f 285 SUPERFAMILY SSF53850 8 241 9.23E-10 T 11-10-2018 AMS64_16955 2254751e21d174a13aff6f3bb6d43d54 132 Pfam PF03724 META domain 26 125 7.0E-25 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AMS64_16955 2254751e21d174a13aff6f3bb6d43d54 132 Gene3D G3DSA:2.40.128.270 18 128 1.0E-22 T 11-10-2018 IPR038670 HslJ-like superfamily AMS64_11250 674801bb5cdcecbc2780039980a4cba3 95 Gene3D G3DSA:2.60.200.60 4 95 6.3E-35 T 11-10-2018 AMS64_11250 674801bb5cdcecbc2780039980a4cba3 95 Pfam PF05488 PAAR motif 20 87 2.8E-15 T 11-10-2018 IPR008727 PAAR motif AMS64_18685 3deb858d395022e0dcd41386befe17c5 202 PIRSF PIRSF006324 1 202 1.0E-44 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMS64_18685 3deb858d395022e0dcd41386befe17c5 202 Pfam PF01810 LysE type translocator 15 201 9.2E-31 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMS64_12890 9a4d68d532ebb11c3bb62943076686ff 124 Pfam PF05656 Protein of unknown function (DUF805) 11 113 2.3E-34 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AMS64_17095 6f612066869891524e5356082296469f 382 Pfam PF02690 Na+/Pi-cotransporter 216 329 4.7E-18 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AMS64_17095 6f612066869891524e5356082296469f 382 Pfam PF02690 Na+/Pi-cotransporter 28 183 9.8E-20 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AMS64_13485 a5ef2fc4fd84a41711a59beb03ae833e 291 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 21 277 1.1E-102 T 11-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family AMS64_13485 a5ef2fc4fd84a41711a59beb03ae833e 291 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 223 234 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMS64_13485 a5ef2fc4fd84a41711a59beb03ae833e 291 SUPERFAMILY SSF54862 93 276 6.8E-19 T 11-10-2018 AMS64_13485 a5ef2fc4fd84a41711a59beb03ae833e 291 Pfam PF12801 4Fe-4S binding domain 81 125 1.6E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_13485 a5ef2fc4fd84a41711a59beb03ae833e 291 Pfam PF12801 4Fe-4S binding domain 173 210 3.0E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMS64_13485 a5ef2fc4fd84a41711a59beb03ae833e 291 Gene3D G3DSA:3.30.70.20 214 288 2.4E-7 T 11-10-2018 AMS64_07195 9c29e41972cf61ce0892199bb28d20f7 254 Gene3D G3DSA:3.40.190.10 107 210 5.0E-19 T 11-10-2018 AMS64_07195 9c29e41972cf61ce0892199bb28d20f7 254 Gene3D G3DSA:3.40.190.10 32 244 5.0E-19 T 11-10-2018 AMS64_07195 9c29e41972cf61ce0892199bb28d20f7 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 247 1.0E-13 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_07195 9c29e41972cf61ce0892199bb28d20f7 254 SUPERFAMILY SSF53850 15 248 2.86E-29 T 11-10-2018 AMS64_21120 98f8968d1b57bc19cea3923e9a68a81b 142 SUPERFAMILY SSF55729 32 139 1.44E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_21120 98f8968d1b57bc19cea3923e9a68a81b 142 Gene3D G3DSA:3.40.630.30 39 140 2.6E-26 T 11-10-2018 AMS64_21120 98f8968d1b57bc19cea3923e9a68a81b 142 Pfam PF13673 Acetyltransferase (GNAT) domain 38 124 4.2E-10 T 11-10-2018 IPR000182 GNAT domain AMS64_11850 31c45944b5f286010af1ad9528cd6ae6 312 Pfam PF09925 Predicted membrane protein (DUF2157) 11 152 5.8E-33 T 11-10-2018 IPR018677 Domain of unknown function DUF2157 AMS64_11910 3d46f239b673bb77fada71caf3beddc2 82 Pfam PF04226 Transglycosylase associated protein 36 81 1.7E-11 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 AMS64_22395 75073391c1088b7cec7c1c00d556e941 333 Pfam PF00962 Adenosine/AMP deaminase 6 326 1.4E-92 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AMS64_22395 75073391c1088b7cec7c1c00d556e941 333 Gene3D G3DSA:3.20.20.140 2 333 4.7E-99 T 11-10-2018 AMS64_22395 75073391c1088b7cec7c1c00d556e941 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.268 T 11-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 AMS64_22395 75073391c1088b7cec7c1c00d556e941 333 SUPERFAMILY SSF51556 4 325 6.05E-76 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_22395 75073391c1088b7cec7c1c00d556e941 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 329 2.7E-116 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AMS64_19670 55064ccb353db2cf89b4096a712bc7a2 369 Gene3D G3DSA:3.40.50.2000 177 303 5.1E-6 T 11-10-2018 AMS64_19670 55064ccb353db2cf89b4096a712bc7a2 369 SUPERFAMILY SSF53756 1 299 5.8E-20 T 11-10-2018 AMS64_19670 55064ccb353db2cf89b4096a712bc7a2 369 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 301 9.8E-67 T 11-10-2018 IPR005262 Conserved hypothetical protein CHP00661 AMS64_19670 55064ccb353db2cf89b4096a712bc7a2 369 Pfam PF13528 Glycosyl transferase family 1 1 299 3.6E-44 T 11-10-2018 AMS64_12125 ce325c3a102a33e595940554d316111e 107 Pfam PF05106 Phage holin family (Lysis protein S) 3 101 7.9E-33 T 11-10-2018 IPR006481 Bacteriophage lambda, GpS, holin AMS64_12125 ce325c3a102a33e595940554d316111e 107 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 1 104 4.1E-32 T 11-10-2018 IPR006481 Bacteriophage lambda, GpS, holin AMS64_08345 249759a06583443555a899dbbd1151ec 655 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 629 4.2E-212 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 Pfam PF01578 Cytochrome C assembly protein 89 295 1.3E-47 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 5.6E-20 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 5.6E-20 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 5.6E-20 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 5.6E-20 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 5.6E-20 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 5.6E-20 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 632 5.7E-84 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AMS64_08345 249759a06583443555a899dbbd1151ec 655 TIGRFAM TIGR03145 cyt_nit_nrfE: cytochrome c nitrate reductase biogenesis protein NrfE 2 629 2.7E-290 T 11-10-2018 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 5.3E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 5.3E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 5.3E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 5.3E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 5.3E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 5.3E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 5.3E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_08345 249759a06583443555a899dbbd1151ec 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 5.3E-75 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_06145 a8696d2bd81e5614e2c5bda4ca626744 298 SUPERFAMILY SSF52540 12 278 1.12E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_06145 a8696d2bd81e5614e2c5bda4ca626744 298 Pfam PF05621 Bacterial TniB protein 22 275 5.1E-107 T 11-10-2018 IPR008868 Bacterial TniB AMS64_06145 a8696d2bd81e5614e2c5bda4ca626744 298 SMART SM00382 55 209 0.0017 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_06145 a8696d2bd81e5614e2c5bda4ca626744 298 Gene3D G3DSA:3.40.50.300 26 209 2.8E-20 T 11-10-2018 AMS64_12650 39bdfcb6b4211d5374c93e60a1b79b16 383 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 16 376 6.0E-129 T 11-10-2018 IPR011673 Protein of unknown function DUF1615 AMS64_12650 39bdfcb6b4211d5374c93e60a1b79b16 383 Pfam PF07759 Protein of unknown function (DUF1615) 63 377 1.6E-142 T 11-10-2018 IPR011673 Protein of unknown function DUF1615 AMS64_14985 03c99a486b9286783f5fbc2f0e6eb074 189 Gene3D G3DSA:1.20.120.740 4 189 5.9E-50 T 11-10-2018 AMS64_14985 03c99a486b9286783f5fbc2f0e6eb074 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 16 151 4.6E-11 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AMS64_14985 03c99a486b9286783f5fbc2f0e6eb074 189 SUPERFAMILY SSF101327 7 175 7.06E-36 T 11-10-2018 IPR036255 YgfB-like superfamily AMS64_14985 03c99a486b9286783f5fbc2f0e6eb074 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 176 3.1E-33 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AMS64_02205 d3523004bc525b28e70b33f805d2d4d4 353 Pfam PF13343 Bacterial extracellular solute-binding protein 89 312 1.7E-32 T 11-10-2018 AMS64_02205 d3523004bc525b28e70b33f805d2d4d4 353 SUPERFAMILY SSF53850 41 346 2.22E-48 T 11-10-2018 AMS64_02205 d3523004bc525b28e70b33f805d2d4d4 353 Gene3D G3DSA:3.40.190.10 65 316 2.6E-36 T 11-10-2018 AMS64_02205 d3523004bc525b28e70b33f805d2d4d4 353 Gene3D G3DSA:3.40.190.10 139 323 2.6E-36 T 11-10-2018 AMS64_04585 d65d17c44be5bd23c3916188cae903c6 187 Pfam PF10973 Protein of unknown function (DUF2799) 30 111 3.9E-24 T 11-10-2018 IPR021242 Protein of unknown function DUF2799 AMS64_22275 db3f729e852154fe939ae057014c3c40 146 Pfam PF10675 Protein of unknown function (DUF2489) 13 139 3.2E-46 T 11-10-2018 IPR019617 Domain of unknown function DUF2489 AMS64_19015 e5c86ccaf126ecb2cba216de9a5fc9cc 485 Pfam PF00474 Sodium:solute symporter family 36 433 5.1E-111 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMS64_19015 e5c86ccaf126ecb2cba216de9a5fc9cc 485 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 470 8.8E-217 T 11-10-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 AMS64_19015 e5c86ccaf126ecb2cba216de9a5fc9cc 485 Gene3D G3DSA:1.20.1730.10 26 484 1.0E-84 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AMS64_19015 e5c86ccaf126ecb2cba216de9a5fc9cc 485 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 433 1.8E-95 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMS64_16970 6743a8f577e569594650d8f501b855b2 138 Pfam PF11697 Protein of unknown function (DUF3293) 30 103 3.0E-17 T 11-10-2018 IPR021710 Protein of unknown function DUF3293 AMS64_13985 12eb3e2128af744a4a39c753a26ed5a4 223 Pfam PF11726 Inovirus Gp2 40 220 1.3E-47 T 11-10-2018 AMS64_11440 33727f7447082f5e84b291fb926f429a 111 Pfam PF12290 Protein of unknown function (DUF3802) 1 110 1.9E-46 T 11-10-2018 IPR020979 Uncharacterised protein family A0KLC6 AMS64_19920 b287b68c5c513c1b029c9f4e13445d14 398 Pfam PF07690 Major Facilitator Superfamily 18 309 1.3E-29 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_19920 b287b68c5c513c1b029c9f4e13445d14 398 Gene3D G3DSA:1.20.1250.20 4 385 2.9E-45 T 11-10-2018 AMS64_19920 b287b68c5c513c1b029c9f4e13445d14 398 SUPERFAMILY SSF103473 11 389 1.28E-47 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_09885 7e2d5d80c763227f7ae10dd96d17008d 184 PIRSF PIRSF028288 4 184 1.5E-81 T 11-10-2018 IPR016878 Uncharacterised conserved protein UCP028288 AMS64_09885 7e2d5d80c763227f7ae10dd96d17008d 184 SUPERFAMILY SSF54427 121 181 1.18E-6 T 11-10-2018 IPR032710 NTF2-like domain superfamily AMS64_09885 7e2d5d80c763227f7ae10dd96d17008d 184 Gene3D G3DSA:3.10.450.50 20 184 3.7E-23 T 11-10-2018 AMS64_06025 1a13a2cd931b47bbeefba2a58fbae447 306 SUPERFAMILY SSF56601 7 306 2.2E-109 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMS64_06025 1a13a2cd931b47bbeefba2a58fbae447 306 Pfam PF04960 Glutaminase 22 306 2.8E-109 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AMS64_06025 1a13a2cd931b47bbeefba2a58fbae447 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 46.632 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AMS64_06025 1a13a2cd931b47bbeefba2a58fbae447 306 Gene3D G3DSA:3.40.710.10 3 306 8.8E-106 T 11-10-2018 AMS64_06025 1a13a2cd931b47bbeefba2a58fbae447 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.7E-126 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AMS64_07675 fac5193c42f36177596602d69dc62656 352 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 340 4.2E-115 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_07675 fac5193c42f36177596602d69dc62656 352 Gene3D G3DSA:3.40.1690.10 211 349 4.1E-55 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AMS64_07675 fac5193c42f36177596602d69dc62656 352 SUPERFAMILY SSF160544 238 345 2.49E-33 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AMS64_07675 fac5193c42f36177596602d69dc62656 352 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 1.7E-142 T 11-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 AMS64_07675 fac5193c42f36177596602d69dc62656 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 3.2E-46 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_07675 fac5193c42f36177596602d69dc62656 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 3.2E-46 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_07675 fac5193c42f36177596602d69dc62656 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 3.2E-46 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_07675 fac5193c42f36177596602d69dc62656 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 3.2E-46 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_07675 fac5193c42f36177596602d69dc62656 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 3.2E-46 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMS64_09895 fb69f6a4317085cd43d1d8f462a086af 216 SUPERFAMILY SSF53850 37 214 6.98E-7 T 11-10-2018 AMS64_15390 425c9965b5e19db18aa589cac2dcdd2b 300 Gene3D G3DSA:3.20.20.330 1 300 1.9E-73 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AMS64_15390 425c9965b5e19db18aa589cac2dcdd2b 300 SUPERFAMILY SSF82282 3 300 1.02E-79 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AMS64_15390 425c9965b5e19db18aa589cac2dcdd2b 300 PIRSF PIRSF037505 177 233 84.0 T 11-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 AMS64_15390 425c9965b5e19db18aa589cac2dcdd2b 300 PIRSF PIRSF037505 256 300 0.077 T 11-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 AMS64_15390 425c9965b5e19db18aa589cac2dcdd2b 300 PIRSF PIRSF037505 1 208 2.1E-9 T 11-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 AMS64_15390 425c9965b5e19db18aa589cac2dcdd2b 300 Pfam PF02574 Homocysteine S-methyltransferase 8 298 3.6E-56 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AMS64_04315 1e64e50e8aa6ded154692826fa0cade2 153 Gene3D G3DSA:3.40.1550.10 1 153 2.1E-43 T 11-10-2018 IPR028976 CheC-like superfamily AMS64_04315 1e64e50e8aa6ded154692826fa0cade2 153 SUPERFAMILY SSF103039 1 153 3.53E-36 T 11-10-2018 IPR028976 CheC-like superfamily AMS64_04315 1e64e50e8aa6ded154692826fa0cade2 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 140 1.6E-22 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain AMS64_02330 6650b552331198b920639d76010399b8 195 Pfam PF14163 Super-infection exclusion protein B 18 164 2.3E-40 T 11-10-2018 IPR025982 Superinfection exclusion protein B AMS64_17945 ed93da3b5e98cdeaea374c7c7a66ea63 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17945 ed93da3b5e98cdeaea374c7c7a66ea63 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 7.5E-162 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17945 ed93da3b5e98cdeaea374c7c7a66ea63 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 5.1E-59 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17945 ed93da3b5e98cdeaea374c7c7a66ea63 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 5.1E-59 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17945 ed93da3b5e98cdeaea374c7c7a66ea63 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 5.1E-59 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17945 ed93da3b5e98cdeaea374c7c7a66ea63 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 5.1E-59 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17945 ed93da3b5e98cdeaea374c7c7a66ea63 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 5.1E-59 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17945 ed93da3b5e98cdeaea374c7c7a66ea63 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 5.1E-59 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_17945 ed93da3b5e98cdeaea374c7c7a66ea63 476 Pfam PF01235 Sodium:alanine symporter family 48 452 1.8E-161 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMS64_12925 dcbfc094d9db52b63960f2fd42ce1afc 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.1E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_12925 dcbfc094d9db52b63960f2fd42ce1afc 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.1E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_12925 dcbfc094d9db52b63960f2fd42ce1afc 206 SUPERFAMILY SSF46689 8 80 1.85E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_12925 dcbfc094d9db52b63960f2fd42ce1afc 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 2.3E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMS64_12925 dcbfc094d9db52b63960f2fd42ce1afc 206 Gene3D G3DSA:1.10.357.10 8 197 7.2E-49 T 11-10-2018 AMS64_13265 0d7857d88a872b297dca8d5d33f11ae6 491 Pfam PF03606 C4-dicarboxylate anaerobic carrier 13 485 3.0E-120 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AMS64_15140 03bf1e8b3f7427ff993164ca87159a69 219 Pfam PF09335 SNARE associated Golgi protein 44 169 9.5E-18 T 11-10-2018 IPR032816 SNARE associated Golgi protein AMS64_12560 fd16b0f4604695fd7c35686c253b4ecc 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 118 1.1E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMS64_12560 fd16b0f4604695fd7c35686c253b4ecc 122 SUPERFAMILY SSF54593 1 118 6.18E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_12560 fd16b0f4604695fd7c35686c253b4ecc 122 Gene3D G3DSA:3.10.180.10 6 121 4.1E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_21300 7456e33a93c7aab06d0fa4098e1eb03c 438 Pfam PF07690 Major Facilitator Superfamily 65 389 2.5E-24 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_21300 7456e33a93c7aab06d0fa4098e1eb03c 438 Gene3D G3DSA:1.20.1250.20 18 434 3.8E-52 T 11-10-2018 AMS64_21300 7456e33a93c7aab06d0fa4098e1eb03c 438 SUPERFAMILY SSF103473 17 431 2.62E-60 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_00805 0711497464dd2047f3e9416737fee272 814 SUPERFAMILY SSF53474 438 588 3.41E-6 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_00805 0711497464dd2047f3e9416737fee272 814 Pfam PF12262 Bacterial virulence factor lipase N-terminal 28 255 7.5E-27 T 11-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain AMS64_00805 0711497464dd2047f3e9416737fee272 814 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 799 8.1E-151 T 11-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family AMS64_00805 0711497464dd2047f3e9416737fee272 814 Gene3D G3DSA:3.40.50.1820 431 599 2.4E-10 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_18360 7ea5400453573d02ba57af0dd071fcbc 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 5.4E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_18360 7ea5400453573d02ba57af0dd071fcbc 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 94 107 5.4E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_18360 7ea5400453573d02ba57af0dd071fcbc 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 5.4E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_18360 7ea5400453573d02ba57af0dd071fcbc 203 Gene3D G3DSA:3.40.50.1000 4 179 1.1E-39 T 11-10-2018 IPR023214 HAD superfamily AMS64_18360 7ea5400453573d02ba57af0dd071fcbc 203 Gene3D G3DSA:1.10.150.240 16 80 1.1E-39 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMS64_18360 7ea5400453573d02ba57af0dd071fcbc 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 85 179 5.0E-9 T 11-10-2018 AMS64_18360 7ea5400453573d02ba57af0dd071fcbc 203 SUPERFAMILY SSF56784 2 191 1.0E-34 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_18360 7ea5400453573d02ba57af0dd071fcbc 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 59 180 7.2E-16 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMS64_17870 db358ed0cc97024e3a9c30d5d9761e7b 194 Pfam PF16872 Putative phage abortive infection protein 113 180 1.6E-5 T 11-10-2018 IPR031709 Putative phage abortive infection protein AMS64_12485 c272af9e77f69a7630bc663390f55644 202 Pfam PF07681 DoxX 23 110 5.5E-13 T 11-10-2018 IPR032808 DoxX family AMS64_14265 cbab51a03d461f21e27491e59b2a0004 207 Pfam PF03942 DTW domain 10 195 1.2E-47 T 11-10-2018 IPR005636 DTW AMS64_14265 cbab51a03d461f21e27491e59b2a0004 207 SMART SM01144 8 203 4.7E-64 T 11-10-2018 IPR005636 DTW AMS64_21995 c090f7365a2d2815ae59bad6f6301fd1 323 Pfam PF00589 Phage integrase family 163 307 7.7E-20 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_21995 c090f7365a2d2815ae59bad6f6301fd1 323 SUPERFAMILY SSF56349 60 315 4.71E-39 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_21995 c090f7365a2d2815ae59bad6f6301fd1 323 Pfam PF14657 Arm DNA-binding domain 18 46 5.1E-5 T 11-10-2018 IPR028259 AP2-like integrase, N-terminal domain AMS64_21995 c090f7365a2d2815ae59bad6f6301fd1 323 Gene3D G3DSA:1.10.443.10 162 323 1.6E-38 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_06450 96b45667ac7230972cbb3b2c87e75ab4 462 Gene3D G3DSA:3.30.9.10 147 376 6.6E-75 T 11-10-2018 AMS64_06450 96b45667ac7230972cbb3b2c87e75ab4 462 SUPERFAMILY SSF51905 55 428 5.18E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_06450 96b45667ac7230972cbb3b2c87e75ab4 462 Pfam PF01266 FAD dependent oxidoreductase 56 416 2.0E-58 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMS64_06450 96b45667ac7230972cbb3b2c87e75ab4 462 Gene3D G3DSA:3.50.50.60 56 416 6.6E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_16415 a5ca275acab86e258d50a93320cb40a6 229 Gene3D G3DSA:3.40.50.300 1 227 1.2E-65 T 11-10-2018 AMS64_16415 a5ca275acab86e258d50a93320cb40a6 229 Pfam PF00005 ABC transporter 24 172 1.1E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_16415 a5ca275acab86e258d50a93320cb40a6 229 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_16415 a5ca275acab86e258d50a93320cb40a6 229 SMART SM00382 33 221 3.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_16415 a5ca275acab86e258d50a93320cb40a6 229 SUPERFAMILY SSF52540 4 223 4.67E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_08795 71e0e21979a6c7d05334d3c4694ce05e 404 Gene3D G3DSA:1.20.120.740 4 130 2.0E-10 T 11-10-2018 AMS64_08795 71e0e21979a6c7d05334d3c4694ce05e 404 SUPERFAMILY SSF48452 257 360 2.0E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_08795 71e0e21979a6c7d05334d3c4694ce05e 404 Pfam PF03695 Uncharacterised protein family (UPF0149) 9 122 2.3E-12 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AMS64_08795 71e0e21979a6c7d05334d3c4694ce05e 404 SUPERFAMILY SSF101327 9 119 1.24E-13 T 11-10-2018 IPR036255 YgfB-like superfamily AMS64_08550 c16fe3bfa38cb5f12ca8e4d9ff8dbd7c 164 Pfam PF04073 Aminoacyl-tRNA editing domain 19 145 5.4E-28 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMS64_08550 c16fe3bfa38cb5f12ca8e4d9ff8dbd7c 164 Gene3D G3DSA:3.90.960.10 1 163 7.2E-48 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMS64_08550 c16fe3bfa38cb5f12ca8e4d9ff8dbd7c 164 SUPERFAMILY SSF55826 4 158 2.22E-39 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMS64_12190 9e1448af319f3e50203b73392e9b0b16 273 SMART SM01040 18 103 1.2E-25 T 11-10-2018 IPR003497 BRO N-terminal domain AMS64_12190 9e1448af319f3e50203b73392e9b0b16 273 Pfam PF02498 BRO family, N-terminal domain 19 103 1.1E-22 T 11-10-2018 IPR003497 BRO N-terminal domain AMS64_07225 2c0be5441038acc819fe232ed0108557 243 Gene3D G3DSA:3.40.190.10 111 203 2.5E-38 T 11-10-2018 AMS64_07225 2c0be5441038acc819fe232ed0108557 243 Gene3D G3DSA:3.40.190.10 32 242 2.5E-38 T 11-10-2018 AMS64_07225 2c0be5441038acc819fe232ed0108557 243 SUPERFAMILY SSF53850 25 242 2.29E-43 T 11-10-2018 AMS64_07225 2c0be5441038acc819fe232ed0108557 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 242 4.3E-31 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_07225 2c0be5441038acc819fe232ed0108557 243 SMART SM00062 27 243 2.3E-11 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_04785 aee1f10aac2f9e37ccf8dbb794839aa6 133 Gene3D G3DSA:3.10.180.10 11 130 1.4E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_04785 aee1f10aac2f9e37ccf8dbb794839aa6 133 SUPERFAMILY SSF54593 6 130 4.3E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMS64_04785 aee1f10aac2f9e37ccf8dbb794839aa6 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 1.2E-19 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMS64_09295 41c603f4729628996179e9a6c8d1fbf3 466 Pfam PF00128 Alpha amylase, catalytic domain 35 239 5.7E-18 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_09295 41c603f4729628996179e9a6c8d1fbf3 466 SMART SM00642 22 380 2.2E-54 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMS64_09295 41c603f4729628996179e9a6c8d1fbf3 466 SUPERFAMILY SSF51445 20 366 7.18E-67 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMS64_09295 41c603f4729628996179e9a6c8d1fbf3 466 Gene3D G3DSA:3.20.20.80 18 385 2.1E-83 T 11-10-2018 AMS64_09295 41c603f4729628996179e9a6c8d1fbf3 466 PRINTS PR00110 Alpha-amylase signature 305 317 2.1E-14 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMS64_09295 41c603f4729628996179e9a6c8d1fbf3 466 PRINTS PR00110 Alpha-amylase signature 63 80 2.1E-14 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMS64_09295 41c603f4729628996179e9a6c8d1fbf3 466 PRINTS PR00110 Alpha-amylase signature 210 221 2.1E-14 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMS64_09295 41c603f4729628996179e9a6c8d1fbf3 466 PRINTS PR00110 Alpha-amylase signature 239 257 2.1E-14 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMS64_09295 41c603f4729628996179e9a6c8d1fbf3 466 PRINTS PR00110 Alpha-amylase signature 96 107 2.1E-14 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMS64_08235 2e43d5793ea11815c45687f87698371b 106 Pfam PF14302 Domain of unknown function (DUF4377) 28 102 2.3E-30 T 11-10-2018 IPR025485 Domain of unknown function DUF4377 AMS64_07705 6c2c6080249852e4c939cb0f5175a39b 104 Pfam PF07321 Type III secretion protein YscO 3 66 9.1E-12 T 11-10-2018 IPR009929 Type III secretion sytem,YscO AMS64_01665 10ca9663d167c40df49fbda2a0513527 164 PIRSF PIRSF003174 7 164 1.0E-63 T 11-10-2018 IPR010292 Uncharacterised protein family CreA AMS64_01665 10ca9663d167c40df49fbda2a0513527 164 Pfam PF05981 CreA protein 35 162 9.0E-55 T 11-10-2018 IPR010292 Uncharacterised protein family CreA AMS64_15215 5bc25acd474afdfc24f7a24066892527 447 Gene3D G3DSA:3.20.20.140 55 414 5.2E-140 T 11-10-2018 AMS64_15215 5bc25acd474afdfc24f7a24066892527 447 ProSitePatterns PS00483 Dihydroorotase signature 2. 310 321 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMS64_15215 5bc25acd474afdfc24f7a24066892527 447 Gene3D G3DSA:2.30.40.10 6 429 5.2E-140 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_15215 5bc25acd474afdfc24f7a24066892527 447 SUPERFAMILY SSF51338 1 438 3.01E-33 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMS64_15215 5bc25acd474afdfc24f7a24066892527 447 Pfam PF01979 Amidohydrolase family 51 427 1.7E-18 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMS64_15215 5bc25acd474afdfc24f7a24066892527 447 SUPERFAMILY SSF51556 54 375 3.18E-91 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMS64_09655 fcc0803f40509353a839230efb0166c0 100 Pfam PF07130 YebG protein 1 74 2.3E-31 T 11-10-2018 IPR009813 Uncharacterised protein family YebG AMS64_09655 fcc0803f40509353a839230efb0166c0 100 Gene3D G3DSA:1.10.10.710 21 91 8.5E-7 T 11-10-2018 IPR038627 YebG-like superfamily AMS64_07655 c16489e6c78db357941296eff17f0219 235 Pfam PF11340 Protein of unknown function (DUF3142) 81 177 2.4E-17 T 11-10-2018 IPR021488 Protein of unknown function DUF3142 AMS64_20155 4c53031dd77d4aedeed6eebade2da2c1 1203 Pfam PF05567 Neisseria PilC beta-propeller domain 672 964 4.3E-19 T 11-10-2018 IPR008707 PilC beta-propeller domain AMS64_20155 4c53031dd77d4aedeed6eebade2da2c1 1203 SUPERFAMILY SSF53300 239 463 3.67E-5 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMS64_13350 a83687e63b418a6981cca041d820a96b 374 Gene3D G3DSA:3.40.50.720 163 321 1.4E-35 T 11-10-2018 AMS64_13350 a83687e63b418a6981cca041d820a96b 374 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 173 316 4.9E-11 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMS64_13350 a83687e63b418a6981cca041d820a96b 374 Gene3D G3DSA:3.40.50.1480 12 366 1.4E-35 T 11-10-2018 AMS64_13350 a83687e63b418a6981cca041d820a96b 374 SMART SM00997 159 321 3.5E-27 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMS64_13350 a83687e63b418a6981cca041d820a96b 374 SUPERFAMILY SSF51735 173 318 2.04E-15 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_01685 f211cf1e40e978794500234574ce81f6 443 SUPERFAMILY SSF54368 2 104 5.1E-22 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMS64_01685 f211cf1e40e978794500234574ce81f6 443 SMART SM01230 107 362 8.9E-115 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMS64_01685 f211cf1e40e978794500234574ce81f6 443 Pfam PF00120 Glutamine synthetase, catalytic domain 109 437 5.2E-113 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMS64_01685 f211cf1e40e978794500234574ce81f6 443 Gene3D G3DSA:3.30.590.10 110 441 4.4E-108 T 11-10-2018 AMS64_01685 f211cf1e40e978794500234574ce81f6 443 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 243 258 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMS64_01685 f211cf1e40e978794500234574ce81f6 443 SUPERFAMILY SSF55931 108 440 2.65E-113 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMS64_01685 f211cf1e40e978794500234574ce81f6 443 Gene3D G3DSA:3.10.20.70 1 108 1.1E-6 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMS64_13070 a8b6791c2afcd657a21298453484537b 345 SUPERFAMILY SSF81345 19 338 1.83E-57 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_13070 a8b6791c2afcd657a21298453484537b 345 Gene3D G3DSA:1.10.3470.10 23 344 3.7E-67 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMS64_13070 a8b6791c2afcd657a21298453484537b 345 Pfam PF01032 FecCD transport family 34 338 1.5E-67 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMS64_10545 8f8423b1df264ea8df83cd5148fb622a 80 Pfam PF05284 Protein of unknown function (DUF736) 2 74 2.0E-20 T 11-10-2018 IPR007948 Protein of unknown function DUF736 AMS64_06355 d4192f29934e07c3eba707df7ec1ec01 200 SUPERFAMILY SSF55469 4 199 1.7E-70 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMS64_06355 d4192f29934e07c3eba707df7ec1ec01 200 Gene3D G3DSA:3.40.109.10 3 200 4.3E-83 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMS64_06355 d4192f29934e07c3eba707df7ec1ec01 200 Pfam PF00881 Nitroreductase family 9 178 7.0E-15 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMS64_18225 1404614fd571f3c5233c0cc84225e9f7 194 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.0E-38 T 11-10-2018 IPR005619 Uncharacterised protein family, YajG AMS64_05000 34d4850ee35e1a526e6c2735ad17754f 121 Pfam PF09834 Predicted membrane protein (DUF2061) 62 111 2.4E-20 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane AMS64_05000 34d4850ee35e1a526e6c2735ad17754f 121 Pfam PF09834 Predicted membrane protein (DUF2061) 1 51 1.0E-19 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane AMS64_13670 73b217155b640e798992b2d840e4c112 246 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 244 50.16 T 11-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 AMS64_13670 73b217155b640e798992b2d840e4c112 246 SMART SM00481 5 79 1.0E-10 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMS64_13670 73b217155b640e798992b2d840e4c112 246 Gene3D G3DSA:3.20.20.140 3 246 9.5E-61 T 11-10-2018 AMS64_13670 73b217155b640e798992b2d840e4c112 246 SUPERFAMILY SSF89550 4 243 5.76E-60 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMS64_10345 9117fad84eda0137c4093fc68c286616 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 329 8.6E-38 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_10345 9117fad84eda0137c4093fc68c286616 336 SUPERFAMILY SSF161098 105 314 5.34E-17 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_10345 9117fad84eda0137c4093fc68c286616 336 Gene3D G3DSA:1.10.3720.10 101 328 1.5E-16 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_11845 500d2264111a9ebce3c193d4189d85e5 185 Pfam PF01169 Uncharacterized protein family UPF0016 5 80 2.5E-20 T 11-10-2018 IPR001727 Gdt1 family AMS64_11845 500d2264111a9ebce3c193d4189d85e5 185 Pfam PF01169 Uncharacterized protein family UPF0016 104 178 9.8E-23 T 11-10-2018 IPR001727 Gdt1 family AMS64_00625 8e0e7717354d9f18474f5c61330ec7f2 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 132 7.8E-35 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMS64_00625 8e0e7717354d9f18474f5c61330ec7f2 133 Gene3D G3DSA:3.30.420.270 60 128 4.7E-14 T 11-10-2018 AMS64_12965 a5d52d7babe3adc677dbac5864094c8b 71 Gene3D G3DSA:1.20.58.660 1 71 1.1E-25 T 11-10-2018 AMS64_12965 a5d52d7babe3adc677dbac5864094c8b 71 Pfam PF04325 Protein of unknown function (DUF465) 19 66 2.9E-14 T 11-10-2018 IPR007420 Protein of unknown function DUF465 AMS64_22585 e87ae858b8f9ffa85c5977178a870c53 168 Pfam PF04463 Protein of unknown function (DUF523) 9 144 9.3E-43 T 11-10-2018 IPR007553 Domain of unknown function DUF523 AMS64_14235 dc4af374670e7a03a1fecbc4c768a77b 526 Pfam PF03553 Na+/H+ antiporter family 165 491 1.1E-86 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AMS64_20665 777b3d678128d5e39e6026bd17182f6f 420 Pfam PF13194 Domain of unknown function (DUF4010) 184 393 1.4E-63 T 11-10-2018 IPR025105 Domain of unknown function DUF4010 AMS64_20665 777b3d678128d5e39e6026bd17182f6f 420 Pfam PF02308 MgtC family 12 135 1.4E-14 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMS64_22295 013f91e1da46e22a22a8482ebb3ee3e2 218 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 27.435 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AMS64_22295 013f91e1da46e22a22a8482ebb3ee3e2 218 SUPERFAMILY SSF52540 18 199 1.28E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_22295 013f91e1da46e22a22a8482ebb3ee3e2 218 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 3.5E-73 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AMS64_22295 013f91e1da46e22a22a8482ebb3ee3e2 218 Pfam PF01926 50S ribosome-binding GTPase 30 148 8.8E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMS64_22295 013f91e1da46e22a22a8482ebb3ee3e2 218 Gene3D G3DSA:3.40.50.300 4 205 1.4E-56 T 11-10-2018 AMS64_00375 dff860a416d839ac97de15504c119a87 416 SUPERFAMILY SSF53383 16 411 8.39E-61 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_00375 dff860a416d839ac97de15504c119a87 416 Pfam PF00155 Aminotransferase class I and II 66 402 2.8E-23 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMS64_00375 dff860a416d839ac97de15504c119a87 416 Gene3D G3DSA:3.40.640.10 1 415 7.3E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_16365 9de7130b8e3d1042d3d915600832df48 242 Gene3D G3DSA:3.30.2350.10 19 240 4.7E-63 T 11-10-2018 AMS64_16365 9de7130b8e3d1042d3d915600832df48 242 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 74 88 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_16365 9de7130b8e3d1042d3d915600832df48 242 Pfam PF00849 RNA pseudouridylate synthase 36 190 3.0E-25 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_16365 9de7130b8e3d1042d3d915600832df48 242 SUPERFAMILY SSF55120 23 239 3.52E-56 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMS64_20070 48a6af9429eb2e465677a681b7510319 301 Pfam PF12146 Serine aminopeptidase, S33 33 258 1.1E-13 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AMS64_20070 48a6af9429eb2e465677a681b7510319 301 SUPERFAMILY SSF53474 13 295 2.36E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_20070 48a6af9429eb2e465677a681b7510319 301 Gene3D G3DSA:3.40.50.1820 2 298 7.0E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_08635 b69385e733589733dfb19a31afcdd6e3 173 Gene3D G3DSA:1.20.1550.10 1 171 3.7E-57 T 11-10-2018 IPR023380 DsbB-like superfamily AMS64_08635 b69385e733589733dfb19a31afcdd6e3 173 SUPERFAMILY SSF158442 15 160 6.8E-45 T 11-10-2018 IPR023380 DsbB-like superfamily AMS64_08635 b69385e733589733dfb19a31afcdd6e3 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 168 22.564 T 11-10-2018 IPR022920 Disulphide bond formation protein DsbB AMS64_08635 b69385e733589733dfb19a31afcdd6e3 173 Pfam PF02600 Disulfide bond formation protein DsbB 12 160 1.3E-45 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AMS64_11405 6b38bf8f5c6f74c31c980d40c63c5cac 226 Gene3D G3DSA:3.40.50.300 1 226 3.8E-66 T 11-10-2018 AMS64_11405 6b38bf8f5c6f74c31c980d40c63c5cac 226 SUPERFAMILY SSF52540 1 223 2.3E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_11405 6b38bf8f5c6f74c31c980d40c63c5cac 226 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMS64_11405 6b38bf8f5c6f74c31c980d40c63c5cac 226 SMART SM00382 30 224 5.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_11405 6b38bf8f5c6f74c31c980d40c63c5cac 226 Pfam PF00005 ABC transporter 22 167 1.3E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMS64_05705 36e31f774026482109fde45e0e30c2ed 383 Pfam PF00990 Diguanylate cyclase, GGDEF domain 219 378 1.1E-50 T 11-10-2018 IPR000160 GGDEF domain AMS64_05705 36e31f774026482109fde45e0e30c2ed 383 Gene3D G3DSA:3.30.70.270 210 383 2.4E-58 T 11-10-2018 AMS64_05705 36e31f774026482109fde45e0e30c2ed 383 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 215 382 1.4E-50 T 11-10-2018 IPR000160 GGDEF domain AMS64_05705 36e31f774026482109fde45e0e30c2ed 383 SUPERFAMILY SSF55073 224 381 1.26E-49 T 11-10-2018 IPR029787 Nucleotide cyclase AMS64_05705 36e31f774026482109fde45e0e30c2ed 383 SMART SM00267 208 382 9.8E-65 T 11-10-2018 IPR000160 GGDEF domain AMS64_05705 36e31f774026482109fde45e0e30c2ed 383 Pfam PF17178 Membrane-associated sensor 28 218 1.1E-26 T 11-10-2018 IPR033444 Membrane-associated sensor MASE5 AMS64_10550 847a5f2c4e1cdaf28ef84eb96fa29876 1094 Pfam PF13087 AAA domain 960 1061 8.5E-12 T 11-10-2018 AMS64_10550 847a5f2c4e1cdaf28ef84eb96fa29876 1094 SUPERFAMILY SSF52540 277 1064 2.5E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_10550 847a5f2c4e1cdaf28ef84eb96fa29876 1094 Pfam PF13086 AAA domain 790 849 2.8E-7 T 11-10-2018 AMS64_10550 847a5f2c4e1cdaf28ef84eb96fa29876 1094 Gene3D G3DSA:3.40.50.300 908 1082 3.2E-24 T 11-10-2018 AMS64_05515 59e61025f549ae8a14870108f49d05ea 187 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 1.4E-64 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AMS64_05515 59e61025f549ae8a14870108f49d05ea 187 Pfam PF04279 Intracellular septation protein A 1 175 1.8E-68 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AMS64_05515 59e61025f549ae8a14870108f49d05ea 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 18.668 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AMS64_11350 b795c28acd70ad52de4bf15167750b44 132 SUPERFAMILY SSF46689 9 105 1.04E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_13640 b795c28acd70ad52de4bf15167750b44 132 SUPERFAMILY SSF46689 9 105 1.04E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_03930 3cabdfe93aae8805dfff52a0fc8fcd52 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.222 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 AMS64_03930 3cabdfe93aae8805dfff52a0fc8fcd52 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 2.5E-50 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 AMS64_08030 9420c2dc6d8937879f4138971a37563a 245 Pfam PF03741 Integral membrane protein TerC family 16 204 9.1E-50 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AMS64_20435 78838aa796a716b890518ef7be49a6c1 187 Pfam PF07298 NnrU protein 4 185 8.1E-43 T 11-10-2018 IPR009915 NnrU domain AMS64_00240 db6fc78ae12f791d30870ff9c02f00d2 237 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 29 232 1.4E-63 T 11-10-2018 AMS64_00240 db6fc78ae12f791d30870ff9c02f00d2 237 SUPERFAMILY SSF56112 44 196 1.28E-18 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMS64_00240 db6fc78ae12f791d30870ff9c02f00d2 237 Gene3D G3DSA:1.10.510.10 138 236 2.0E-16 T 11-10-2018 AMS64_00240 db6fc78ae12f791d30870ff9c02f00d2 237 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 234 35.043 T 11-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 AMS64_03540 2804126229c4f700d1f9d30189b0cde4 133 Pfam PF03788 LrgA family 22 115 6.3E-27 T 11-10-2018 IPR005538 LrgA/CidA family GO:0016021 AMS64_22100 333f92fe0225a4908641b2080e8758a7 108 Pfam PF05106 Phage holin family (Lysis protein S) 4 101 1.3E-30 T 11-10-2018 IPR006481 Bacteriophage lambda, GpS, holin AMS64_22100 333f92fe0225a4908641b2080e8758a7 108 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 1 102 1.2E-40 T 11-10-2018 IPR006481 Bacteriophage lambda, GpS, holin AMS64_15540 333f92fe0225a4908641b2080e8758a7 108 Pfam PF05106 Phage holin family (Lysis protein S) 4 101 1.3E-30 T 11-10-2018 IPR006481 Bacteriophage lambda, GpS, holin AMS64_15540 333f92fe0225a4908641b2080e8758a7 108 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 1 102 1.2E-40 T 11-10-2018 IPR006481 Bacteriophage lambda, GpS, holin AMS64_20065 6769d69423f9e56030101722df9486cb 792 Pfam PF07238 PilZ domain 144 203 3.6E-6 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AMS64_20065 6769d69423f9e56030101722df9486cb 792 Pfam PF07238 PilZ domain 474 540 9.2E-5 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AMS64_20065 6769d69423f9e56030101722df9486cb 792 SUPERFAMILY SSF141371 144 201 5.1E-6 T 11-10-2018 AMS64_20065 6769d69423f9e56030101722df9486cb 792 SUPERFAMILY SSF141371 474 530 5.3E-7 T 11-10-2018 AMS64_06585 ffcb19dcb56f8ff078b713bb3146e149 177 Pfam PF04351 Pilus assembly protein, PilP 21 170 8.7E-47 T 11-10-2018 IPR007446 Pilus assembly protein PilP AMS64_06585 ffcb19dcb56f8ff078b713bb3146e149 177 PIRSF PIRSF016481 1 174 1.1E-41 T 11-10-2018 IPR007446 Pilus assembly protein PilP AMS64_06585 ffcb19dcb56f8ff078b713bb3146e149 177 Gene3D G3DSA:2.30.30.830 79 171 1.6E-27 T 11-10-2018 AMS64_05055 f0f4eba17c04e77966f285e2217c41ca 198 Pfam PF01810 LysE type translocator 19 190 1.2E-14 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMS64_08065 a413873c36bc8356377c288970cbd622 212 Pfam PF13460 NAD(P)H-binding 7 200 1.2E-29 T 11-10-2018 IPR016040 NAD(P)-binding domain AMS64_08065 a413873c36bc8356377c288970cbd622 212 SUPERFAMILY SSF51735 1 210 1.25E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_08065 a413873c36bc8356377c288970cbd622 212 Gene3D G3DSA:3.40.50.720 2 211 1.8E-51 T 11-10-2018 AMS64_09670 5c236cdd0da90351004a44fd2cb617b5 191 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 14 123 3.8E-35 T 11-10-2018 IPR008769 Poly granule associated AMS64_02435 22fe4a8c3616410f625faa2e5d7a4632 684 Pfam PF10145 Phage-related minor tail protein 96 287 1.1E-26 T 11-10-2018 IPR010090 Phage tail tape measure protein AMS64_02435 22fe4a8c3616410f625faa2e5d7a4632 684 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 52 392 1.1E-25 T 11-10-2018 IPR010090 Phage tail tape measure protein AMS64_06935 c9eb9a96570c4fb8959c69a80462788b 117 Pfam PF02635 DsrE/DsrF-like family 4 117 2.7E-23 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AMS64_06935 c9eb9a96570c4fb8959c69a80462788b 117 SUPERFAMILY SSF75169 4 117 9.29E-32 T 11-10-2018 IPR027396 DsrEFH-like AMS64_06935 c9eb9a96570c4fb8959c69a80462788b 117 Gene3D G3DSA:3.40.1260.10 2 117 3.3E-33 T 11-10-2018 IPR027396 DsrEFH-like AMS64_14490 2be69f38d86e38fb15469ece557f6233 189 Pfam PF07603 Protein of unknown function (DUF1566) 43 173 2.8E-20 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 AMS64_04395 01fe6ac6ee2241f3d5c99a4a2515141a 549 Pfam PF02470 MlaD protein 290 392 5.4E-12 T 11-10-2018 IPR003399 Mce/MlaD AMS64_04395 01fe6ac6ee2241f3d5c99a4a2515141a 549 Pfam PF02470 MlaD protein 44 135 5.1E-6 T 11-10-2018 IPR003399 Mce/MlaD AMS64_17055 81f1946ba54ebe7115ff87138e4ec70d 425 SUPERFAMILY SSF51905 28 411 3.04E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_17055 81f1946ba54ebe7115ff87138e4ec70d 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 4.5E-55 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMS64_17055 81f1946ba54ebe7115ff87138e4ec70d 425 Gene3D G3DSA:3.30.9.10 121 342 1.5E-73 T 11-10-2018 AMS64_17055 81f1946ba54ebe7115ff87138e4ec70d 425 Gene3D G3DSA:3.50.50.60 29 380 1.5E-73 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMS64_22490 ae84a8fab02359cafb9b77054730c6b8 92 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 14 81 3.0E-5 T 11-10-2018 AMS64_22490 ae84a8fab02359cafb9b77054730c6b8 92 Pfam PF13710 ACT domain 23 81 1.3E-22 T 11-10-2018 AMS64_22490 ae84a8fab02359cafb9b77054730c6b8 92 SUPERFAMILY SSF55021 13 82 3.12E-11 T 11-10-2018 AMS64_22490 ae84a8fab02359cafb9b77054730c6b8 92 Gene3D G3DSA:3.30.70.260 6 92 2.4E-12 T 11-10-2018 AMS64_06385 af9c33e0e015debbb02997bf5c8843a5 398 PIRSF PIRSF015557 6 398 2.0E-146 T 11-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 AMS64_06385 af9c33e0e015debbb02997bf5c8843a5 398 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 10 394 4.4E-144 T 11-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 AMS64_06385 af9c33e0e015debbb02997bf5c8843a5 398 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 10 394 3.1E-147 T 11-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 AMS64_16535 4d631c4eda4691352c8194b1d43fc2f5 454 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 8 447 8.0E-83 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AMS64_16535 4d631c4eda4691352c8194b1d43fc2f5 454 Pfam PF02321 Outer membrane efflux protein 57 240 6.7E-19 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMS64_16535 4d631c4eda4691352c8194b1d43fc2f5 454 Pfam PF02321 Outer membrane efflux protein 268 446 6.0E-19 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMS64_16535 4d631c4eda4691352c8194b1d43fc2f5 454 SUPERFAMILY SSF56954 2 447 2.75E-88 T 11-10-2018 AMS64_16535 4d631c4eda4691352c8194b1d43fc2f5 454 Gene3D G3DSA:1.20.1600.10 48 447 2.6E-100 T 11-10-2018 AMS64_16535 4d631c4eda4691352c8194b1d43fc2f5 454 Gene3D G3DSA:2.20.200.10 94 337 2.6E-100 T 11-10-2018 AMS64_21415 656007858fc02fdbccf0ef212b3609f0 296 Pfam PF13401 AAA domain 42 173 1.1E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain AMS64_21415 656007858fc02fdbccf0ef212b3609f0 296 SUPERFAMILY SSF52540 5 266 4.87E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_21415 656007858fc02fdbccf0ef212b3609f0 296 Gene3D G3DSA:3.40.50.300 28 187 4.6E-14 T 11-10-2018 AMS64_04800 d1bf8022e99fdb471493cf9b81ee2d38 180 SUPERFAMILY SSF55144 3 168 2.09E-36 T 11-10-2018 IPR009097 Cyclic phosphodiesterase AMS64_04800 d1bf8022e99fdb471493cf9b81ee2d38 180 Pfam PF02834 LigT like Phosphoesterase 9 78 7.4E-10 T 11-10-2018 IPR014051 Phosphoesterase, HXTX AMS64_04800 d1bf8022e99fdb471493cf9b81ee2d38 180 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 3 167 1.2E-28 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AMS64_04800 d1bf8022e99fdb471493cf9b81ee2d38 180 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 2 167 19.969 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AMS64_04800 d1bf8022e99fdb471493cf9b81ee2d38 180 Gene3D G3DSA:3.90.1140.10 1 168 6.7E-37 T 11-10-2018 AMS64_01330 5b77d5363332c92a3db3e86cbd541584 278 Gene3D G3DSA:3.40.50.720 1 271 1.9E-105 T 11-10-2018 AMS64_01330 5b77d5363332c92a3db3e86cbd541584 278 SUPERFAMILY SSF69572 4 260 6.54E-69 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AMS64_01330 5b77d5363332c92a3db3e86cbd541584 278 Pfam PF00899 ThiF family 17 262 8.6E-44 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMS64_11370 d8264b7279e9c72fe7273a4fda2559f0 279 Pfam PF03239 Iron permease FTR1 family 1 257 8.6E-35 T 11-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 AMS64_18620 31bae3944f9919ae26af14d640bbd85f 295 Pfam PF01963 TraB family 26 285 2.7E-56 T 11-10-2018 IPR002816 Pheromone shutdown, TraB AMS64_07315 b954cb468dd494bad88e1cbc7d0d01f4 642 Gene3D G3DSA:3.30.750.140 488 604 2.5E-30 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily AMS64_07315 b954cb468dd494bad88e1cbc7d0d01f4 642 Pfam PF02120 Flagellar hook-length control protein FliK 507 591 9.7E-22 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AMS64_16240 4c99db9b153c998ccefc5031cd7ea149 225 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 176 3.0E-48 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AMS64_16240 4c99db9b153c998ccefc5031cd7ea149 225 Pfam PF13500 AAA domain 3 208 1.5E-33 T 11-10-2018 AMS64_16240 4c99db9b153c998ccefc5031cd7ea149 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 212 29.375 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AMS64_16240 4c99db9b153c998ccefc5031cd7ea149 225 Gene3D G3DSA:3.40.50.300 1 222 7.3E-66 T 11-10-2018 AMS64_16240 4c99db9b153c998ccefc5031cd7ea149 225 SUPERFAMILY SSF52540 1 216 1.19E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_16240 4c99db9b153c998ccefc5031cd7ea149 225 PIRSF PIRSF006755 1 222 1.1E-71 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AMS64_00475 7bef89a241350045d9987de4eb4cd781 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 80 95 9.7E-20 T 11-10-2018 AMS64_00475 7bef89a241350045d9987de4eb4cd781 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 178 193 9.7E-20 T 11-10-2018 AMS64_00475 7bef89a241350045d9987de4eb4cd781 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 202 220 9.7E-20 T 11-10-2018 AMS64_00475 7bef89a241350045d9987de4eb4cd781 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 49 67 9.7E-20 T 11-10-2018 AMS64_00475 7bef89a241350045d9987de4eb4cd781 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 267 280 9.7E-20 T 11-10-2018 AMS64_00475 7bef89a241350045d9987de4eb4cd781 297 SUPERFAMILY SSF53807 31 286 7.46E-48 T 11-10-2018 AMS64_00475 7bef89a241350045d9987de4eb4cd781 297 Gene3D G3DSA:3.40.50.1980 27 116 2.4E-22 T 11-10-2018 AMS64_00475 7bef89a241350045d9987de4eb4cd781 297 Gene3D G3DSA:3.40.50.1980 119 289 2.9E-54 T 11-10-2018 AMS64_00475 7bef89a241350045d9987de4eb4cd781 297 Pfam PF01497 Periplasmic binding protein 32 265 1.5E-21 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AMS64_01800 5244bb57c28fcfb4635fae5eacde40b9 408 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 9 387 1.7E-128 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_01800 5244bb57c28fcfb4635fae5eacde40b9 408 Pfam PF03222 Tryptophan/tyrosine permease family 3 394 4.1E-126 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AMS64_01800 5244bb57c28fcfb4635fae5eacde40b9 408 PRINTS PR00166 Aromatic amino acid permease signature 84 104 3.4E-82 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_01800 5244bb57c28fcfb4635fae5eacde40b9 408 PRINTS PR00166 Aromatic amino acid permease signature 281 300 3.4E-82 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_01800 5244bb57c28fcfb4635fae5eacde40b9 408 PRINTS PR00166 Aromatic amino acid permease signature 220 239 3.4E-82 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_01800 5244bb57c28fcfb4635fae5eacde40b9 408 PRINTS PR00166 Aromatic amino acid permease signature 144 164 3.4E-82 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_01800 5244bb57c28fcfb4635fae5eacde40b9 408 PRINTS PR00166 Aromatic amino acid permease signature 12 35 3.4E-82 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_01800 5244bb57c28fcfb4635fae5eacde40b9 408 PRINTS PR00166 Aromatic amino acid permease signature 182 204 3.4E-82 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_01800 5244bb57c28fcfb4635fae5eacde40b9 408 PRINTS PR00166 Aromatic amino acid permease signature 39 58 3.4E-82 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_01800 5244bb57c28fcfb4635fae5eacde40b9 408 PRINTS PR00166 Aromatic amino acid permease signature 315 333 3.4E-82 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_01800 5244bb57c28fcfb4635fae5eacde40b9 408 PRINTS PR00166 Aromatic amino acid permease signature 336 355 3.4E-82 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AMS64_01800 5244bb57c28fcfb4635fae5eacde40b9 408 Gene3D G3DSA:1.20.1740.10 1 407 2.2E-5 T 11-10-2018 AMS64_18375 8082e024deae67b72d0f888dfd1ed19f 206 PIRSF PIRSF028688 1 200 3.8E-46 T 11-10-2018 IPR014549 Flagellar protein FlgO AMS64_19470 bfe55ce01185ed4d0d8e812874746371 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 202 3.1E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_19470 bfe55ce01185ed4d0d8e812874746371 217 Gene3D G3DSA:1.10.3720.10 1 216 2.2E-54 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_19470 bfe55ce01185ed4d0d8e812874746371 217 SUPERFAMILY SSF161098 8 201 4.06E-47 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_19900 1fe4ba1c8c0d52f40a57d8e7f89ee329 183 SUPERFAMILY SSF55729 4 179 1.19E-42 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_19900 1fe4ba1c8c0d52f40a57d8e7f89ee329 183 Pfam PF13302 Acetyltransferase (GNAT) domain 31 155 2.3E-18 T 11-10-2018 IPR000182 GNAT domain AMS64_19900 1fe4ba1c8c0d52f40a57d8e7f89ee329 183 Gene3D G3DSA:3.40.630.30 4 181 9.9E-44 T 11-10-2018 AMS64_13825 2fd195cc8bfbe60435011f5ec913bc48 121 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 121 4.3E-45 T 11-10-2018 IPR012672 Type III secretion system YscX AMS64_13825 2fd195cc8bfbe60435011f5ec913bc48 121 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 121 1.5E-48 T 11-10-2018 IPR012672 Type III secretion system YscX AMS64_07730 2fd195cc8bfbe60435011f5ec913bc48 121 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 121 4.3E-45 T 11-10-2018 IPR012672 Type III secretion system YscX AMS64_07730 2fd195cc8bfbe60435011f5ec913bc48 121 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 121 1.5E-48 T 11-10-2018 IPR012672 Type III secretion system YscX AMS64_06040 9aab6ff243fa23c4abeccb16ba894173 133 Pfam PF10807 Protein of unknown function (DUF2541) 12 130 2.5E-9 T 11-10-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI AMS64_03550 71fb3f7436432b8754866f1d465d8607 299 SUPERFAMILY SSF53850 102 255 1.11E-12 T 11-10-2018 AMS64_18445 cd41e1b04e255672b11ddfc1a3d65363 179 SUPERFAMILY SSF55166 16 152 3.84E-8 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMS64_11775 056b7375537197cda5e8fbb887a511be 438 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 435 5.7E-100 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AMS64_11775 056b7375537197cda5e8fbb887a511be 438 SUPERFAMILY SSF56954 5 423 3.4E-84 T 11-10-2018 AMS64_11775 056b7375537197cda5e8fbb887a511be 438 Pfam PF02321 Outer membrane efflux protein 25 214 1.0E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMS64_11775 056b7375537197cda5e8fbb887a511be 438 Pfam PF02321 Outer membrane efflux protein 236 420 5.8E-28 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMS64_11775 056b7375537197cda5e8fbb887a511be 438 Gene3D G3DSA:1.20.1600.10 23 431 1.1E-78 T 11-10-2018 AMS64_05470 11a22d08afdf7ff9198840908fddc041 153 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 141 1.8E-36 T 11-10-2018 AMS64_05470 11a22d08afdf7ff9198840908fddc041 153 PIRSF PIRSF004923 1 152 3.5E-49 T 11-10-2018 IPR026268 Protein RseC AMS64_17685 e9c1f46d85b75f82f666e63c2ed3b64e 123 Pfam PF04138 GtrA-like protein 12 122 2.4E-15 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 AMS64_02955 a1afd8737e5cefaee1b29b9e22534f8c 196 Gene3D G3DSA:3.40.50.10490 1 196 1.8E-62 T 11-10-2018 AMS64_02955 a1afd8737e5cefaee1b29b9e22534f8c 196 SUPERFAMILY SSF53697 1 191 2.43E-47 T 11-10-2018 AMS64_02955 a1afd8737e5cefaee1b29b9e22534f8c 196 Pfam PF13580 SIS domain 8 144 3.9E-31 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMS64_01440 0e6898ca0c2a6ea82d0a20d74ec5665e 218 Pfam PF11769 Protein of unknown function (DUF3313) 13 206 4.3E-42 T 11-10-2018 IPR021747 Protein of unknown function DUF3313 AMS64_05325 cd75954b1a3e15f28269947ec49a18d8 176 SUPERFAMILY SSF55729 6 139 1.99E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_05325 cd75954b1a3e15f28269947ec49a18d8 176 Pfam PF00583 Acetyltransferase (GNAT) family 16 126 3.2E-9 T 11-10-2018 IPR000182 GNAT domain AMS64_05325 cd75954b1a3e15f28269947ec49a18d8 176 Gene3D G3DSA:3.40.630.30 1 155 9.2E-43 T 11-10-2018 AMS64_21955 77acf2b354e4acd1e9d7321805e3eb84 245 SUPERFAMILY SSF64438 2 243 1.12E-87 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMS64_21955 77acf2b354e4acd1e9d7321805e3eb84 245 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 243 1.6E-64 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AMS64_21955 77acf2b354e4acd1e9d7321805e3eb84 245 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 242 8.0E-81 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AMS64_21955 77acf2b354e4acd1e9d7321805e3eb84 245 Gene3D G3DSA:3.60.140.10 1 245 1.1E-96 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily AMS64_20975 eea6eaa6707d43c26bca52ac6940449e 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 289 7.5E-24 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain AMS64_20975 eea6eaa6707d43c26bca52ac6940449e 300 Gene3D G3DSA:3.30.70.1350 207 293 4.3E-28 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMS64_20975 eea6eaa6707d43c26bca52ac6940449e 300 Pfam PF01545 Cation efflux family 9 206 1.2E-46 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMS64_20975 eea6eaa6707d43c26bca52ac6940449e 300 SUPERFAMILY SSF160240 211 290 2.09E-21 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMS64_20975 eea6eaa6707d43c26bca52ac6940449e 300 SUPERFAMILY SSF161111 2 208 5.75E-55 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMS64_20975 eea6eaa6707d43c26bca52ac6940449e 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 290 2.5E-71 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMS64_20975 eea6eaa6707d43c26bca52ac6940449e 300 Gene3D G3DSA:1.20.1510.10 4 206 5.2E-62 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMS64_02830 53089dff4dc7ac158148254bd68f5b2b 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 3.4E-34 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AMS64_02830 53089dff4dc7ac158148254bd68f5b2b 95 SUPERFAMILY SSF69754 1 95 1.31E-35 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMS64_02830 53089dff4dc7ac158148254bd68f5b2b 95 Gene3D G3DSA:3.30.160.100 1 95 2.6E-37 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMS64_02830 53089dff4dc7ac158148254bd68f5b2b 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 1.8E-28 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AMS64_00865 60cdb5f764df2d17a5f2e7142b4ea74d 511 Gene3D G3DSA:1.20.120.260 92 226 4.7E-49 T 11-10-2018 IPR037168 Virulence factor YopE, GAP domain superfamily AMS64_00865 60cdb5f764df2d17a5f2e7142b4ea74d 511 Pfam PF03545 Yersinia virulence determinant (YopE) 126 195 1.3E-21 T 11-10-2018 IPR014773 Virulence factor YopE, GAP domain AMS64_00865 60cdb5f764df2d17a5f2e7142b4ea74d 511 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 41 58 7.4E-21 T 11-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 AMS64_00865 60cdb5f764df2d17a5f2e7142b4ea74d 511 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 126 143 7.4E-21 T 11-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 AMS64_00865 60cdb5f764df2d17a5f2e7142b4ea74d 511 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 209 226 7.4E-21 T 11-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 AMS64_00865 60cdb5f764df2d17a5f2e7142b4ea74d 511 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 25 38 7.4E-21 T 11-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 AMS64_00865 60cdb5f764df2d17a5f2e7142b4ea74d 511 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 175 193 7.4E-21 T 11-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 AMS64_00865 60cdb5f764df2d17a5f2e7142b4ea74d 511 SUPERFAMILY SSF47233 92 225 7.32E-50 T 11-10-2018 IPR037168 Virulence factor YopE, GAP domain superfamily AMS64_12135 58e367599df447347cc683b721059913 140 SUPERFAMILY SSF51306 18 135 3.49E-31 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMS64_12135 58e367599df447347cc683b721059913 140 Pfam PF00717 Peptidase S24-like 56 117 1.4E-10 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMS64_12135 58e367599df447347cc683b721059913 140 Gene3D G3DSA:2.10.109.10 24 138 1.0E-46 T 11-10-2018 AMS64_12135 58e367599df447347cc683b721059913 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 90 102 2.5E-11 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMS64_12135 58e367599df447347cc683b721059913 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 51 61 2.5E-11 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMS64_12135 58e367599df447347cc683b721059913 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 62 73 2.5E-11 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMS64_03825 7bab644054de452190871bc77e138d36 103 Pfam PF10115 Transcriptional activator HlyU 4 92 3.7E-35 T 11-10-2018 IPR018772 Transcription activator HlyU AMS64_00955 ba5cd7aafe964def712019e21287c47b 485 PIRSF PIRSF006247 1 485 1.3E-177 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AMS64_00955 ba5cd7aafe964def712019e21287c47b 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 468 2.0E-114 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AMS64_00955 ba5cd7aafe964def712019e21287c47b 485 Pfam PF02386 Cation transport protein 38 479 9.7E-91 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AMS64_18060 125c45deea28eb2f4d7376337bdd6712 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 127 3.0E-44 T 11-10-2018 IPR020911 Uncharacterised protein family UPF0325 AMS64_18060 125c45deea28eb2f4d7376337bdd6712 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 127 4.3E-58 T 11-10-2018 IPR020911 Uncharacterised protein family UPF0325 AMS64_18060 125c45deea28eb2f4d7376337bdd6712 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.524 T 11-10-2018 IPR020911 Uncharacterised protein family UPF0325 AMS64_16345 24727c2f3ec06655c9e42065953fcf3e 98 PIRSF PIRSF037266 1 98 3.3E-39 T 11-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 AMS64_16345 24727c2f3ec06655c9e42065953fcf3e 98 Pfam PF09904 Winged helix-turn helix 6 95 2.2E-40 T 11-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 AMS64_16345 24727c2f3ec06655c9e42065953fcf3e 98 Gene3D G3DSA:1.10.10.10 1 98 3.1E-40 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_02780 8540212cb46df71f4c5d49884176ba88 210 Pfam PF05494 MlaC protein 36 200 1.9E-48 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AMS64_02780 8540212cb46df71f4c5d49884176ba88 210 Gene3D G3DSA:3.10.450.710 27 205 3.9E-45 T 11-10-2018 AMS64_02780 8540212cb46df71f4c5d49884176ba88 210 PIRSF PIRSF004649 1 209 9.3E-61 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AMS64_05255 979505d989dc75eb2cd36dcffe3f0de2 186 SUPERFAMILY SSF51161 7 139 1.94E-32 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMS64_05255 979505d989dc75eb2cd36dcffe3f0de2 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 4.4E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_05255 979505d989dc75eb2cd36dcffe3f0de2 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 3.4E-5 T 11-10-2018 IPR001451 Hexapeptide repeat AMS64_05255 979505d989dc75eb2cd36dcffe3f0de2 186 Gene3D G3DSA:2.160.10.10 1 183 1.6E-47 T 11-10-2018 AMS64_20555 b21740b61b58675a4d80545106661486 235 Pfam PF03591 AzlC protein 24 164 6.0E-35 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease AMS64_13850 ac7c1b819fbb5eeabd12c594695d44d1 153 Pfam PF07321 Type III secretion protein YscO 3 149 6.0E-32 T 11-10-2018 IPR009929 Type III secretion sytem,YscO AMS64_07025 dda94910abe7c6e5fe20f9f9a65e88b1 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 323 8.0E-41 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_07025 dda94910abe7c6e5fe20f9f9a65e88b1 327 Gene3D G3DSA:1.10.3720.10 89 316 2.2E-19 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_07025 dda94910abe7c6e5fe20f9f9a65e88b1 327 SUPERFAMILY SSF161098 93 309 3.79E-18 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_01110 1cf4a9690be91a543b2ec6c84bd7ed31 459 Gene3D G3DSA:1.10.260.40 10 123 6.9E-5 T 11-10-2018 AMS64_17480 04c8a6de6c910b5c347998e54ce5e926 308 Gene3D G3DSA:3.40.50.12780 2 308 5.5E-42 T 11-10-2018 AMS64_17480 04c8a6de6c910b5c347998e54ce5e926 308 SUPERFAMILY SSF56801 30 273 4.71E-10 T 11-10-2018 AMS64_02760 468823867bfaab6dfdc0a4e1731653ab 447 SUPERFAMILY SSF111283 13 446 4.84E-124 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AMS64_02760 468823867bfaab6dfdc0a4e1731653ab 447 Gene3D G3DSA:3.30.2290.10 3 233 3.2E-80 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AMS64_02760 468823867bfaab6dfdc0a4e1731653ab 447 Pfam PF01523 Putative modulator of DNA gyrase 33 322 4.0E-54 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AMS64_19370 b196351c04c43038860dd4a478729d5b 456 Pfam PF07670 Nucleoside recognition 142 237 1.5E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AMS64_14590 c269cb4aff80a161371fab1d36504370 132 SUPERFAMILY SSF46689 11 105 3.23E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_11875 82a7be7db42cbe0fed2d17b10d2ec117 251 Gene3D G3DSA:3.40.190.10 30 244 1.0E-27 T 11-10-2018 AMS64_11875 82a7be7db42cbe0fed2d17b10d2ec117 251 Gene3D G3DSA:3.40.190.10 109 205 1.0E-27 T 11-10-2018 AMS64_11875 82a7be7db42cbe0fed2d17b10d2ec117 251 SMART SM00062 24 248 0.0035 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_11875 82a7be7db42cbe0fed2d17b10d2ec117 251 SUPERFAMILY SSF53850 25 248 6.84E-35 T 11-10-2018 AMS64_11875 82a7be7db42cbe0fed2d17b10d2ec117 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 246 2.4E-23 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_20495 77815d738e536d9525a05a4fbe191035 166 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 11-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 AMS64_20495 77815d738e536d9525a05a4fbe191035 166 Pfam PF08534 Redoxin 21 163 5.5E-25 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMS64_20495 77815d738e536d9525a05a4fbe191035 166 SUPERFAMILY SSF52833 4 164 7.29E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_20495 77815d738e536d9525a05a4fbe191035 166 Hamap MF_00269 Thiol peroxidase [tpx]. 4 166 36.347 T 11-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 AMS64_20495 77815d738e536d9525a05a4fbe191035 166 Gene3D G3DSA:3.40.30.10 1 166 5.7E-43 T 11-10-2018 AMS64_18100 48ba295ebe0a6a085ec8c0e5f7906322 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 93 3.7E-28 T 11-10-2018 IPR021732 Protein of unknown function DUF3301 AMS64_14855 253524cddfc47a2218220f9d873d18f1 108 SMART SM00418 8 89 6.8E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMS64_14855 253524cddfc47a2218220f9d873d18f1 108 Gene3D G3DSA:1.10.10.10 1 97 3.4E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_14855 253524cddfc47a2218220f9d873d18f1 108 Pfam PF12840 Helix-turn-helix domain 7 69 3.7E-15 T 11-10-2018 AMS64_14855 253524cddfc47a2218220f9d873d18f1 108 SUPERFAMILY SSF46785 2 93 4.31E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_11930 ac809fce4049f9a4f4c709551cab536a 143 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 5 137 7.4E-19 T 11-10-2018 IPR009936 Protein of unknown function DUF1468 AMS64_20950 74282b58cabd8bace0d25e4567adecbc 133 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 10 127 6.8E-28 T 11-10-2018 IPR018893 Type VIII secretion system, CsgF AMS64_09595 575e903016a04ba269c3628dffcf4cdd 105 Pfam PF10734 Protein of unknown function (DUF2523) 39 96 2.8E-6 T 11-10-2018 IPR019670 Protein of unkown function DUF2523 AMS64_11685 fec348a37eb49d86618ca5ab7707c34d 290 Pfam PF01136 Peptidase family U32 85 196 1.3E-11 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AMS64_14865 a92bbe5cfc95b7ebf5ab92b32906a051 236 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 189 1.3E-19 T 11-10-2018 AMS64_14865 a92bbe5cfc95b7ebf5ab92b32906a051 236 Gene3D G3DSA:3.40.50.1000 74 234 9.6E-24 T 11-10-2018 IPR023214 HAD superfamily AMS64_14865 a92bbe5cfc95b7ebf5ab92b32906a051 236 SUPERFAMILY SSF56784 3 233 2.8E-28 T 11-10-2018 IPR036412 HAD-like superfamily AMS64_16005 eb667b331930961774c5fbc9153197af 1269 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 936 1267 3.7E-56 T 11-10-2018 IPR007452 Translocation and assembly module TamB AMS64_22120 a274a78e34208735330bd8ddebeb4d41 692 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 52 390 3.4E-29 T 11-10-2018 IPR010090 Phage tail tape measure protein AMS64_22120 a274a78e34208735330bd8ddebeb4d41 692 Pfam PF10145 Phage-related minor tail protein 89 286 1.5E-30 T 11-10-2018 IPR010090 Phage tail tape measure protein AMS64_15520 a274a78e34208735330bd8ddebeb4d41 692 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 52 390 3.4E-29 T 11-10-2018 IPR010090 Phage tail tape measure protein AMS64_15520 a274a78e34208735330bd8ddebeb4d41 692 Pfam PF10145 Phage-related minor tail protein 89 286 1.5E-30 T 11-10-2018 IPR010090 Phage tail tape measure protein AMS64_11460 4ee02364d3668796d0f607495706755f 361 SUPERFAMILY SSF56112 46 194 1.88E-11 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMS64_12460 bbf176f32e3a971d9beaddb36e92ccbb 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 79 1.6E-22 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMS64_12460 bbf176f32e3a971d9beaddb36e92ccbb 98 Gene3D G3DSA:3.30.70.100 1 97 5.1E-30 T 11-10-2018 AMS64_12460 bbf176f32e3a971d9beaddb36e92ccbb 98 SUPERFAMILY SSF54909 1 95 3.79E-32 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMS64_09645 0ea8c2639c77ee33466007b33c6395c4 436 Gene3D G3DSA:1.10.443.10 198 411 7.9E-24 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMS64_09645 0ea8c2639c77ee33466007b33c6395c4 436 Pfam PF00589 Phage integrase family 214 409 4.2E-10 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMS64_09645 0ea8c2639c77ee33466007b33c6395c4 436 SUPERFAMILY SSF56349 47 417 2.88E-26 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_09645 0ea8c2639c77ee33466007b33c6395c4 436 Gene3D G3DSA:1.10.150.130 47 196 3.1E-12 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMS64_15240 0941d524cc603d3aa0c11d72745022a1 132 Gene3D G3DSA:2.60.40.3230 30 130 9.6E-25 T 11-10-2018 IPR038483 YcfL-like superfamily AMS64_15240 0941d524cc603d3aa0c11d72745022a1 132 Pfam PF07233 Protein of unknown function (DUF1425) 39 125 6.4E-24 T 11-10-2018 IPR010824 Protein of unknown function DUF1425 AMS64_11555 f36c90c1c17a99bef22cc699d56a879b 440 Pfam PF03553 Na+/H+ antiporter family 150 434 1.1E-71 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AMS64_11555 f36c90c1c17a99bef22cc699d56a879b 440 Pfam PF13726 Na+-H+ antiporter family 2 88 2.0E-34 T 11-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal AMS64_18370 e6a5e2274573b3f9b62e9b1db6a22f01 141 Pfam PF02169 LPP20 lipoprotein 50 126 2.8E-10 T 11-10-2018 IPR024952 Lipoprotein LPP20-like AMS64_18370 e6a5e2274573b3f9b62e9b1db6a22f01 141 PIRSF PIRSF028687 1 140 4.5E-36 T 11-10-2018 IPR007293 Flagellar protein FlgP AMS64_21345 3855ba5db4216d738791892c92e73678 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 153 7.7E-44 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AMS64_21345 3855ba5db4216d738791892c92e73678 161 Pfam PF04093 rod shape-determining protein MreD 8 154 4.7E-31 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AMS64_21345 3855ba5db4216d738791892c92e73678 161 PIRSF PIRSF018472 2 161 9.3E-54 T 11-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type AMS64_01430 2650defb522d51d902ca03ec38e7e1fb 211 Pfam PF01810 LysE type translocator 15 202 1.8E-31 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMS64_05520 e59079d79b0e4c79bf29006eacf514ef 507 SUPERFAMILY SSF53383 40 491 2.27E-99 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMS64_05520 e59079d79b0e4c79bf29006eacf514ef 507 Gene3D G3DSA:3.90.1150.170 47 492 2.3E-97 T 11-10-2018 AMS64_05520 e59079d79b0e4c79bf29006eacf514ef 507 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 65 412 5.6E-40 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AMS64_05520 e59079d79b0e4c79bf29006eacf514ef 507 Gene3D G3DSA:3.40.640.10 103 357 2.3E-97 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMS64_21605 a9b9a9178289085fe7b16422df3c6d08 199 Pfam PF01914 MarC family integral membrane protein 4 191 9.5E-56 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMS64_21605 a9b9a9178289085fe7b16422df3c6d08 199 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 189 2.9E-29 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMS64_10340 85e9dde0affe77c10e40ad6f0eb4ad8f 271 SUPERFAMILY SSF161098 65 255 9.94E-19 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_10340 85e9dde0affe77c10e40ad6f0eb4ad8f 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 262 7.4E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMS64_10340 85e9dde0affe77c10e40ad6f0eb4ad8f 271 Gene3D G3DSA:1.10.3720.10 61 264 2.5E-14 T 11-10-2018 IPR035906 MetI-like superfamily AMS64_15600 45324c42f117a8fa3356996ff8113b9a 348 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 53 327 1.2E-74 T 11-10-2018 IPR006430 Phage portal protein PBSX family AMS64_15600 45324c42f117a8fa3356996ff8113b9a 348 PIRSF PIRSF018494 1 343 2.2E-128 T 11-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria AMS64_15600 45324c42f117a8fa3356996ff8113b9a 348 Pfam PF04860 Phage portal protein 95 340 3.2E-15 T 11-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein AMS64_01760 d04fbc6db6ebf6b56c8fe2f936d1b3a2 224 Pfam PF02592 Putative vitamin uptake transporter 42 198 1.5E-35 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AMS64_01760 d04fbc6db6ebf6b56c8fe2f936d1b3a2 224 Hamap MF_02088 Probable queuosine precursor transporter. 6 208 15.365 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AMS64_01760 d04fbc6db6ebf6b56c8fe2f936d1b3a2 224 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 202 9.1E-59 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AMS64_00230 d46eec4d4c6d4514d6d00692d7a5381a 284 SUPERFAMILY SSF103481 178 280 5.62E-8 T 11-10-2018 AMS64_00230 d46eec4d4c6d4514d6d00692d7a5381a 284 SUPERFAMILY SSF103481 35 131 2.22E-6 T 11-10-2018 AMS64_00230 d46eec4d4c6d4514d6d00692d7a5381a 284 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 3.9E-70 T 11-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 AMS64_16025 54327a02167f41b556743a3898d7ccd7 224 Pfam PF07386 Protein of unknown function (DUF1499) 84 210 1.7E-25 T 11-10-2018 IPR010865 Protein of unknown function DUF1499 AMS64_17190 0b3596709dd48082139f946aba161bbb 387 Pfam PF05762 VWA domain containing CoxE-like protein 184 271 6.2E-9 T 11-10-2018 IPR008912 Uncharacterised protein family CoxE-like AMS64_00400 69d7352535eb12b68951f04356f71147 234 Pfam PF08279 HTH domain 6 59 7.4E-17 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 AMS64_00400 69d7352535eb12b68951f04356f71147 234 Pfam PF13280 WYL domain 139 225 4.5E-15 T 11-10-2018 IPR026881 WYL domain AMS64_00400 69d7352535eb12b68951f04356f71147 234 Gene3D G3DSA:1.10.10.10 1 64 8.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMS64_00400 69d7352535eb12b68951f04356f71147 234 SUPERFAMILY SSF46785 1 62 2.49E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_16440 e318f783b99f01a838dc97671916638a 137 Pfam PF04143 Sulphur transport 25 127 2.5E-9 T 11-10-2018 IPR007272 Sulphur transport domain AMS64_11445 d6c97c1ca917ef996c5aed01f6a21332 210 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 40 195 1.0E-66 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMS64_11445 d6c97c1ca917ef996c5aed01f6a21332 210 Gene3D G3DSA:3.30.1060.10 1 210 8.5E-91 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMS64_11445 d6c97c1ca917ef996c5aed01f6a21332 210 SUPERFAMILY SSF55068 4 204 9.03E-82 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMS64_11445 d6c97c1ca917ef996c5aed01f6a21332 210 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 39 201 38.891 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMS64_11445 d6c97c1ca917ef996c5aed01f6a21332 210 Pfam PF01625 Peptide methionine sulfoxide reductase 42 195 2.9E-66 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMS64_18510 faa81e3bf333377e7cf5265de27536d7 1690 SUPERFAMILY SSF52540 1296 1676 1.55E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_18510 faa81e3bf333377e7cf5265de27536d7 1690 TIGRFAM TIGR03237 dnd_assoc_2: DNA phosphorothioation-dependent restriction protein DptH 5 1256 0.0 T 11-10-2018 IPR017646 DNA phosphorothioation-dependent restriction protein DptH AMS64_18510 faa81e3bf333377e7cf5265de27536d7 1690 Pfam PF01935 Domain of unknown function DUF87 1343 1503 1.1E-6 T 11-10-2018 IPR002789 Helicase HerA, central domain AMS64_18510 faa81e3bf333377e7cf5265de27536d7 1690 Gene3D G3DSA:3.40.50.300 1504 1688 9.8E-21 T 11-10-2018 AMS64_18510 faa81e3bf333377e7cf5265de27536d7 1690 Gene3D G3DSA:3.40.50.300 1312 1411 4.8E-9 T 11-10-2018 AMS64_09940 75ca273cbe2aab671716cad8afe1ea09 406 Pfam PF13679 Methyltransferase domain 132 238 1.4E-12 T 11-10-2018 IPR025714 Methyltransferase domain AMS64_06720 545150f44f066831349e1659d1d8f00a 238 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 232 2.5E-56 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AMS64_06720 545150f44f066831349e1659d1d8f00a 238 Pfam PF04973 Nicotinamide mononucleotide transporter 25 227 3.2E-52 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AMS64_03855 7b1f3845e1548ae3af75a6de17e426b8 315 Pfam PF02698 DUF218 domain 49 187 3.8E-21 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AMS64_20035 432de3c2d4749c56b41f7026ec707801 285 SUPERFAMILY SSF55186 117 266 5.32E-11 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AMS64_20035 432de3c2d4749c56b41f7026ec707801 285 Gene3D G3DSA:3.30.980.10 117 280 2.7E-7 T 11-10-2018 AMS64_04575 6f7aeffab944b90cc36040a4791dfada 437 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04575 6f7aeffab944b90cc36040a4791dfada 437 Pfam PF00209 Sodium:neurotransmitter symporter family 4 121 5.4E-22 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04575 6f7aeffab944b90cc36040a4791dfada 437 Pfam PF00209 Sodium:neurotransmitter symporter family 149 435 2.7E-29 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04575 6f7aeffab944b90cc36040a4791dfada 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 85 111 8.8E-15 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04575 6f7aeffab944b90cc36040a4791dfada 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 417 437 8.8E-15 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04575 6f7aeffab944b90cc36040a4791dfada 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 8.8E-15 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04575 6f7aeffab944b90cc36040a4791dfada 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 8.8E-15 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMS64_04575 6f7aeffab944b90cc36040a4791dfada 437 SUPERFAMILY SSF161070 4 436 8.37E-123 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AMS64_17285 06177ed968bcbeaaea2dacdc96b67363 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 15 699 1.0E-190 T 11-10-2018 IPR010019 Integral membrane protein, YccS AMS64_17285 06177ed968bcbeaaea2dacdc96b67363 717 Pfam PF13515 Fusaric acid resistance protein-like 406 524 3.6E-23 T 11-10-2018 AMS64_17285 06177ed968bcbeaaea2dacdc96b67363 717 Pfam PF12805 FUSC-like inner membrane protein yccS 69 349 1.7E-93 T 11-10-2018 IPR032692 Integral membrane protein YccS, N-terminal AMS64_17285 06177ed968bcbeaaea2dacdc96b67363 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 16 699 5.9E-188 T 11-10-2018 IPR010020 Integral membrane protein, YccS/YhfK AMS64_15805 059c6289ea3809043b3ef160de192775 132 PIRSF PIRSF002889 1 131 1.6E-40 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AMS64_15805 059c6289ea3809043b3ef160de192775 132 Pfam PF00460 Flagella basal body rod protein 19 39 1.5E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMS64_15805 059c6289ea3809043b3ef160de192775 132 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AMS64_15805 059c6289ea3809043b3ef160de192775 132 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 1.2E-34 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AMS64_18305 e7c37115a4ce8c57a88c3dbf83bbe33f 260 Pfam PF07103 Protein of unknown function (DUF1365) 25 258 6.5E-71 T 11-10-2018 IPR010775 Protein of unknown function DUF1365 AMS64_20945 9429fa532626ac5697dcf282a532e4b8 279 Pfam PF03783 Curli production assembly/transport component CsgG 45 257 1.4E-78 T 11-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 AMS64_20945 9429fa532626ac5697dcf282a532e4b8 279 Gene3D G3DSA:3.40.50.10610 128 278 1.0E-57 T 11-10-2018 AMS64_20945 9429fa532626ac5697dcf282a532e4b8 279 Gene3D G3DSA:3.40.50.10610 32 127 8.8E-35 T 11-10-2018 AMS64_06125 32438a303ca4e2e6a5aafc1bb2041bca 266 Pfam PF11207 Protein of unknown function (DUF2989) 20 217 8.0E-68 T 11-10-2018 IPR021372 Protein of unknown function DUF2989 AMS64_15015 dc388d1a84be0b806587a3be8ab09b46 310 Pfam PF02535 ZIP Zinc transporter 159 305 5.7E-26 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMS64_09525 8240cfe45333fa220ecc645351dd3258 73 Pfam PF11197 Protein of unknown function (DUF2835) 4 71 2.7E-22 T 11-10-2018 IPR021363 Protein of unknown function DUF2835 AMS64_17955 6ac7b1192a4d72698656ea0ca3b72635 60 Pfam PF12065 Protein of unknown function (DUF3545) 1 58 5.2E-19 T 11-10-2018 IPR021932 Protein of unknown function DUF3545 AMS64_13535 8111276a0995daef984e9776bcff6a7a 394 Pfam PF10442 FIST C domain 228 373 1.7E-14 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AMS64_13535 8111276a0995daef984e9776bcff6a7a 394 SMART SM01204 228 374 1.4E-22 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AMS64_13535 8111276a0995daef984e9776bcff6a7a 394 Pfam PF08495 FIST N domain 36 226 8.0E-26 T 11-10-2018 IPR013702 FIST domain, N-terminal AMS64_13535 8111276a0995daef984e9776bcff6a7a 394 SMART SM00897 33 227 4.5E-30 T 11-10-2018 IPR013702 FIST domain, N-terminal AMS64_19265 eff374b846243012b6fa3031f07cc649 83 Pfam PF11173 Protein of unknown function (DUF2960) 1 80 1.4E-35 T 11-10-2018 IPR021343 Protein of unknown function DUF2960 AMS64_06680 7b08388bda8aca635ca9101fe6d95b67 116 Pfam PF07784 Protein of unknown function (DUF1622) 25 97 4.5E-24 T 11-10-2018 IPR012427 Protein of unknown function DUF1622 AMS64_10015 5c4a27cae88f461ccd49222450378c1e 300 Pfam PF01882 Protein of unknown function DUF58 48 129 8.9E-23 T 11-10-2018 IPR002881 Domain of unknown function DUF58 AMS64_09730 aa405dc0ed0a9f5442e3b6a32792db05 850 Pfam PF02470 MlaD protein 40 131 1.1E-12 T 11-10-2018 IPR003399 Mce/MlaD AMS64_09730 aa405dc0ed0a9f5442e3b6a32792db05 850 Pfam PF02470 MlaD protein 380 436 3.1E-8 T 11-10-2018 IPR003399 Mce/MlaD AMS64_09730 aa405dc0ed0a9f5442e3b6a32792db05 850 Pfam PF02470 MlaD protein 724 781 7.8E-8 T 11-10-2018 IPR003399 Mce/MlaD AMS64_09730 aa405dc0ed0a9f5442e3b6a32792db05 850 Pfam PF02470 MlaD protein 624 682 2.9E-7 T 11-10-2018 IPR003399 Mce/MlaD AMS64_07745 bfca8f355e591dedbed3c9a77679a904 151 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 8 147 9.7E-56 T 11-10-2018 IPR013405 Type III secretion system regulator, LcrR AMS64_07745 bfca8f355e591dedbed3c9a77679a904 151 Pfam PF09621 Type III secretion system regulator (LcrR) 9 147 1.1E-54 T 11-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 AMS64_13810 bfca8f355e591dedbed3c9a77679a904 151 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 8 147 9.7E-56 T 11-10-2018 IPR013405 Type III secretion system regulator, LcrR AMS64_13810 bfca8f355e591dedbed3c9a77679a904 151 Pfam PF09621 Type III secretion system regulator (LcrR) 9 147 1.1E-54 T 11-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 AMS64_02880 43b9267c39ad3f50f352c9acb730f226 98 Pfam PF14189 Domain of unknown function (DUF4312) 5 87 4.4E-35 T 11-10-2018 IPR020037 Protein of unknown function DUF4312 AMS64_02880 43b9267c39ad3f50f352c9acb730f226 98 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 2 97 2.2E-42 T 11-10-2018 IPR020037 Protein of unknown function DUF4312 AMS64_14920 a84a1db1ca137a7e95993e3fcdca7047 290 Gene3D G3DSA:3.40.1350.10 11 189 2.4E-36 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AMS64_14920 a84a1db1ca137a7e95993e3fcdca7047 290 SUPERFAMILY SSF52980 29 187 4.4E-26 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMS64_14920 a84a1db1ca137a7e95993e3fcdca7047 290 Pfam PF08722 TnsA endonuclease N terminal 76 186 2.2E-15 T 11-10-2018 IPR014833 TnsA endonuclease, N-terminal AMS64_21620 1239d419027112d93218cd8faba962d0 104 Pfam PF09413 Putative prokaryotic signal transducing protein 4 70 2.1E-14 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 AMS64_21620 1239d419027112d93218cd8faba962d0 104 SUPERFAMILY SSF54913 6 71 4.45E-5 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMS64_14765 1369bca983acfb9514f94905a5273175 356 Pfam PF01594 AI-2E family transporter 20 345 1.9E-76 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AMS64_02720 4a2190b21903a69f2ca0c505a6eb6cc0 226 Pfam PF04340 Protein of unknown function, DUF484 7 220 2.6E-46 T 11-10-2018 IPR007435 Protein of unknown function DUF484 AMS64_02720 4a2190b21903a69f2ca0c505a6eb6cc0 226 Gene3D G3DSA:3.30.450.40 46 224 4.2E-36 T 11-10-2018 IPR029016 GAF-like domain superfamily AMS64_20940 7165edad47a4dcdaabc0801d233b6745 173 Pfam PF07012 Curlin associated repeat 96 129 6.8E-6 T 11-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AMS64_20940 7165edad47a4dcdaabc0801d233b6745 173 Pfam PF07012 Curlin associated repeat 118 151 1.9E-6 T 11-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AMS64_20050 8e1935e9e0e130254ad0eb3647657089 160 PIRSF PIRSF016548 1 160 7.1E-50 T 11-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AMS64_20050 8e1935e9e0e130254ad0eb3647657089 160 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 150 5.5E-53 T 11-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AMS64_20050 8e1935e9e0e130254ad0eb3647657089 160 Gene3D G3DSA:1.20.120.1370 1 157 2.1E-50 T 11-10-2018 IPR038309 Rsd/AlgQ superfamily AMS64_11060 d350e1c4c5a6c864ecf79147e621e21e 183 Pfam PF07273 Protein of unknown function (DUF1439) 24 175 2.0E-47 T 11-10-2018 IPR010835 Protein of unknown function DUF1439 AMS64_11060 d350e1c4c5a6c864ecf79147e621e21e 183 Gene3D G3DSA:3.15.10.40 15 183 5.5E-55 T 11-10-2018 AMS64_04570 c0128ede8f2fcc556b8eea1c62f772d3 239 SUPERFAMILY SSF53850 21 227 1.38E-26 T 11-10-2018 AMS64_04570 c0128ede8f2fcc556b8eea1c62f772d3 239 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 211 4.9E-13 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_04570 c0128ede8f2fcc556b8eea1c62f772d3 239 Gene3D G3DSA:3.40.190.10 26 227 6.5E-17 T 11-10-2018 AMS64_04570 c0128ede8f2fcc556b8eea1c62f772d3 239 Gene3D G3DSA:3.40.190.10 103 199 6.5E-17 T 11-10-2018 AMS64_04855 50bcc883909d4094228df055ad6d5406 132 SUPERFAMILY SSF46689 11 105 7.53E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_07440 9a46e58073e0735d56394717ade9558b 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.6E-62 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07440 9a46e58073e0735d56394717ade9558b 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.6E-62 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07440 9a46e58073e0735d56394717ade9558b 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 2.6E-62 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07440 9a46e58073e0735d56394717ade9558b 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.6E-62 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07440 9a46e58073e0735d56394717ade9558b 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.6E-62 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07440 9a46e58073e0735d56394717ade9558b 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.6E-62 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07440 9a46e58073e0735d56394717ade9558b 246 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 227 1.3E-81 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMS64_07440 9a46e58073e0735d56394717ade9558b 246 Pfam PF01578 Cytochrome C assembly protein 27 184 4.0E-32 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMS64_20160 1459dd2a0caaa2d304f0eea66b2c573b 145 Pfam PF14341 PilX N-terminal 5 39 5.6E-6 T 11-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 Gene3D G3DSA:3.40.30.60 353 496 7.8E-45 T 11-10-2018 AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 Gene3D G3DSA:1.10.490.80 587 690 1.8E-8 T 11-10-2018 AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 12 689 2.0E-241 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 PIRSF PIRSF005419 2 691 1.6E-232 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 Pfam PF00771 FHIPEP family 20 682 8.4E-246 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 27 40 1.0E-53 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 180 197 1.0E-53 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 231 245 1.0E-53 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 150 168 1.0E-53 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 64 83 1.0E-53 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 131 147 1.0E-53 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 136 159 - T 11-10-2018 IPR025505 FHIPEP conserved site AMS64_03030 33efb0eef2fc22703a93340a668b2bd0 691 Gene3D G3DSA:1.10.8.540 497 584 3.4E-15 T 11-10-2018 AMS64_16160 cfe116ea1936fbc9e10656c7d1b6d838 112 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 2.2E-42 T 11-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 AMS64_16160 cfe116ea1936fbc9e10656c7d1b6d838 112 PIRSF PIRSF028770 1 112 1.9E-56 T 11-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 AMS64_14925 1b2ddfb619c38e95b4497c69ffc0ffc8 263 Pfam PF01863 Protein of unknown function DUF45 44 255 2.7E-58 T 11-10-2018 IPR002725 Protein of unknown function DUF45 AMS64_14925 1b2ddfb619c38e95b4497c69ffc0ffc8 263 Gene3D G3DSA:3.30.2010.10 166 261 6.3E-18 T 11-10-2018 AMS64_18390 9c3864cec1bed2387714db0e921480a8 316 Pfam PF06067 Domain of unknown function (DUF932) 75 296 3.5E-76 T 11-10-2018 IPR026325 Protein of unknown function DUF932 AMS64_18390 9c3864cec1bed2387714db0e921480a8 316 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 312 2.0E-113 T 11-10-2018 IPR017686 Phage/plasmid-like protein AMS64_11320 cbf3d9bfb60ca197538d3dc7efd3fb16 493 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 67 490 1.0E-181 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AMS64_11320 cbf3d9bfb60ca197538d3dc7efd3fb16 493 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 491 2.8E-216 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AMS64_11400 50b7847ef0663fe151426deb6a89234c 155 Pfam PF14267 Domain of unknown function (DUF4357) 93 147 2.1E-18 T 11-10-2018 IPR025579 Domain of unknown function DUF4357 AMS64_19610 f8ff412146332b6adf92d025ec0d8b09 211 Gene3D G3DSA:3.40.50.720 1 209 7.1E-42 T 11-10-2018 AMS64_19610 f8ff412146332b6adf92d025ec0d8b09 211 SUPERFAMILY SSF51735 2 206 8.05E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMS64_19610 f8ff412146332b6adf92d025ec0d8b09 211 Pfam PF13460 NAD(P)H-binding 8 193 3.3E-41 T 11-10-2018 IPR016040 NAD(P)-binding domain AMS64_11050 438f8bb0b87c9c3085fea9ba0f5c0bf2 153 Pfam PF11143 Protein of unknown function (DUF2919) 4 149 2.4E-46 T 11-10-2018 IPR021318 Protein of unknown function DUF2919 AMS64_14440 7d70839169e7c4d2555fb77485cc385b 320 Pfam PF12762 ISXO2-like transposase domain 142 287 1.6E-14 T 11-10-2018 IPR024445 ISXO2-like transposase domain AMS64_14440 7d70839169e7c4d2555fb77485cc385b 320 SMART SM01126 140 292 3.7E-45 T 11-10-2018 IPR024445 ISXO2-like transposase domain AMS64_14440 7d70839169e7c4d2555fb77485cc385b 320 Pfam PF13384 Homeodomain-like domain 100 130 1.5E-6 T 11-10-2018 AMS64_00855 7b4e57b19015cec12e7b732ab88039d6 164 Pfam PF10517 Electron transfer DM13 62 157 2.0E-19 T 11-10-2018 IPR019545 DM13 domain AMS64_17020 46af309984b2e1aa9f80575fa9666136 182 Pfam PF01292 Prokaryotic cytochrome b561 8 178 8.5E-20 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMS64_17020 46af309984b2e1aa9f80575fa9666136 182 SUPERFAMILY SSF81342 3 178 1.1E-34 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMS64_09760 03ca0b2b21d530fa90c0a5be04254f72 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 93 8.5E-25 T 11-10-2018 IPR007711 Toxin HigB-1 AMS64_09760 03ca0b2b21d530fa90c0a5be04254f72 93 Gene3D G3DSA:3.30.2310.20 1 93 5.2E-35 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AMS64_09760 03ca0b2b21d530fa90c0a5be04254f72 93 SUPERFAMILY SSF143011 1 93 3.53E-17 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AMS64_21575 aa0984725b0285b7d94fb44eebfc8016 851 Pfam PF11874 Domain of unknown function (DUF3394) 669 847 5.0E-73 T 11-10-2018 IPR021814 Protein of unknown function DUF3394 AMS64_21575 aa0984725b0285b7d94fb44eebfc8016 851 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 664 1.8E-76 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMS64_21575 aa0984725b0285b7d94fb44eebfc8016 851 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 26 720 1.7E-209 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ AMS64_21205 ede01cbff53429a8ebd05d942421b9d3 425 Pfam PF00999 Sodium/hydrogen exchanger family 31 415 1.7E-56 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMS64_04940 a1acb3b567fd4c45637d42e6b7002280 159 Pfam PF07308 Protein of unknown function (DUF1456) 3 76 2.4E-28 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 AMS64_04940 a1acb3b567fd4c45637d42e6b7002280 159 Pfam PF07308 Protein of unknown function (DUF1456) 92 159 1.6E-25 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 AMS64_00050 ed87b86792968d6fc2257eaa4ad71a02 240 Gene3D G3DSA:2.160.20.120 21 237 2.2E-47 T 11-10-2018 AMS64_00050 ed87b86792968d6fc2257eaa4ad71a02 240 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 46 223 3.1E-38 T 11-10-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain AMS64_12730 44e3f6c5d9c6cc47383976a26af4597d 149 Pfam PF04191 Phospholipid methyltransferase 35 138 1.3E-12 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 AMS64_12730 44e3f6c5d9c6cc47383976a26af4597d 149 Gene3D G3DSA:1.20.120.1630 8 149 2.9E-27 T 11-10-2018 AMS64_12730 44e3f6c5d9c6cc47383976a26af4597d 149 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 104 148 4.0E-6 T 11-10-2018 AMS64_17600 3453de7c0f6d835a423f1510905cc663 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 246 2.8E-22 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_17600 3453de7c0f6d835a423f1510905cc663 254 Gene3D G3DSA:3.40.190.10 113 206 3.1E-32 T 11-10-2018 AMS64_17600 3453de7c0f6d835a423f1510905cc663 254 Gene3D G3DSA:3.40.190.10 27 245 3.1E-32 T 11-10-2018 AMS64_17600 3453de7c0f6d835a423f1510905cc663 254 SMART SM00062 24 251 4.2E-6 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMS64_17600 3453de7c0f6d835a423f1510905cc663 254 SUPERFAMILY SSF53850 25 246 3.4E-37 T 11-10-2018 AMS64_07885 4123cfe340bc6aa221e3ba1a00d43bcc 409 Pfam PF06742 Protein of unknown function (DUF1214) 256 357 8.6E-8 T 11-10-2018 IPR010621 Domain of unknown function DUF1214 AMS64_01755 5dfa3106910e501956ce7edcd5941489 95 Pfam PF12305 Protein of unknown function (DUF3630) 3 93 1.0E-26 T 11-10-2018 IPR022080 Protein of unknown function DUF3630 AMS64_12720 2a04ad9a3c712c1dba695830d8dcd94b 118 PIRSF PIRSF021239 1 114 1.9E-57 T 11-10-2018 IPR007437 Protein of unknown function DUF486 AMS64_12720 2a04ad9a3c712c1dba695830d8dcd94b 118 Pfam PF04342 Putative member of DMT superfamily (DUF486) 8 111 1.3E-47 T 11-10-2018 IPR007437 Protein of unknown function DUF486 AMS64_12390 02795fc14069623348906aa598a3968a 123 Pfam PF04219 Protein of unknown function, DUF 8 94 4.0E-32 T 11-10-2018 IPR007335 Protein of unknown function DUF413 AMS64_12480 d5128e98cf1a6e2d2b328f4765cddfd4 223 Gene3D G3DSA:3.40.50.360 1 223 1.4E-79 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_12480 d5128e98cf1a6e2d2b328f4765cddfd4 223 Pfam PF02525 Flavodoxin-like fold 1 208 1.6E-55 T 11-10-2018 IPR003680 Flavodoxin-like fold AMS64_12480 d5128e98cf1a6e2d2b328f4765cddfd4 223 SUPERFAMILY SSF52218 1 215 4.69E-66 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMS64_21895 d71fa020ab759bdebb83c795896a1d07 160 Pfam PF06496 Protein of unknown function (DUF1097) 8 140 4.5E-36 T 11-10-2018 IPR009476 Protein of unknown function DUF1097 AMS64_15990 a29ceb2703637a05b0a1672e68a638ec 169 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 6 158 1.7E-33 T 11-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) AMS64_01125 7186798685d39ad0dd0a73e81c5e1f5c 143 Gene3D G3DSA:1.10.357.10 2 131 7.3E-5 T 11-10-2018 AMS64_01125 7186798685d39ad0dd0a73e81c5e1f5c 143 Pfam PF08279 HTH domain 24 67 1.3E-5 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 AMS64_20415 d71a69640c8a7def4fa2d812e36fb47b 139 Pfam PF14467 Domain of unknown function (DUF4426) 24 139 3.0E-44 T 11-10-2018 IPR025218 Domain of unknown function DUF4426 AMS64_20415 d71a69640c8a7def4fa2d812e36fb47b 139 Gene3D G3DSA:2.60.40.3340 14 139 6.4E-41 T 11-10-2018 AMS64_15250 44b06b2d8504551faf3745b96cf3c8b8 281 SUPERFAMILY SSF56112 26 278 5.1E-28 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMS64_15250 44b06b2d8504551faf3745b96cf3c8b8 281 Pfam PF01636 Phosphotransferase enzyme family 28 231 1.3E-12 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AMS64_15250 44b06b2d8504551faf3745b96cf3c8b8 281 Gene3D G3DSA:3.90.1200.10 107 281 4.8E-17 T 11-10-2018 AMS64_08805 b5cd52bf8517b71a38a0ac9a81892d72 103 Pfam PF14375 Cysteine-rich CWC 53 95 2.0E-6 T 11-10-2018 IPR032720 Cysteine-rich CWC AMS64_08805 b5cd52bf8517b71a38a0ac9a81892d72 103 Pfam PF06945 Protein of unknown function (DUF1289) 3 45 5.5E-17 T 11-10-2018 IPR010710 Protein of unknown function DUF1289 AMS64_11255 299e7d19aa029c1b1da43fb0d5194663 475 Pfam PF12486 Type VI secretion system, EvfB, or VasL 323 469 8.1E-48 T 11-10-2018 IPR021069 ImpA, C-terminal AMS64_11255 299e7d19aa029c1b1da43fb0d5194663 475 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 115 3.1E-22 T 11-10-2018 IPR010657 ImpA, N-terminal AMS64_04100 1e7fe956914c5ddfd047a4372488936f 68 Pfam PF04024 PspC domain 7 59 2.5E-12 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AMS64_12275 fa42434ee74be50325b2cfeaeb4736eb 578 Gene3D G3DSA:3.40.50.620 6 213 1.8E-23 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMS64_12275 fa42434ee74be50325b2cfeaeb4736eb 578 SUPERFAMILY SSF52402 13 206 2.8E-16 T 11-10-2018 AMS64_12275 fa42434ee74be50325b2cfeaeb4736eb 578 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 22 206 1.7E-8 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AMS64_06135 27c415c3939bd5305fdc24ab71f8e402 216 Pfam PF08722 TnsA endonuclease N terminal 44 124 4.3E-16 T 11-10-2018 IPR014833 TnsA endonuclease, N-terminal AMS64_06135 27c415c3939bd5305fdc24ab71f8e402 216 Pfam PF08721 TnsA endonuclease C terminal 126 201 5.3E-10 T 11-10-2018 IPR014832 TnsA endonuclease C-terminal AMS64_13740 6a4eac76dc884fadfc8f5ab39df3a8c3 70 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 2 64 5.1E-18 T 11-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 AMS64_13740 6a4eac76dc884fadfc8f5ab39df3a8c3 70 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 2 65 4.1E-25 T 11-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 AMS64_13740 6a4eac76dc884fadfc8f5ab39df3a8c3 70 Gene3D G3DSA:1.20.5.420 1 67 5.6E-35 T 11-10-2018 AMS64_07815 6a4eac76dc884fadfc8f5ab39df3a8c3 70 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 2 64 5.1E-18 T 11-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 AMS64_07815 6a4eac76dc884fadfc8f5ab39df3a8c3 70 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 2 65 4.1E-25 T 11-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 AMS64_07815 6a4eac76dc884fadfc8f5ab39df3a8c3 70 Gene3D G3DSA:1.20.5.420 1 67 5.6E-35 T 11-10-2018 AMS64_17650 a99a9983f3fb78dd4ce53172497c8b77 204 Pfam PF03458 UPF0126 domain 90 162 1.2E-18 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AMS64_17650 a99a9983f3fb78dd4ce53172497c8b77 204 Pfam PF03458 UPF0126 domain 5 76 2.2E-18 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AMS64_18070 2a5a9b17ffbf3026d7a46dc5d339f89f 323 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 83 217 5.0E-44 T 11-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 AMS64_18655 d9bde0f2042970b7c6987801639385b9 130 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 5.5E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMS64_03530 32ffb07d0ce0b799d99ad60066afe770 281 SUPERFAMILY SSF53850 88 239 3.26E-16 T 11-10-2018 AMS64_06440 eac142b85d843fc859e12f29b5eb158d 224 Pfam PF12261 Thermostable hemolysin 16 185 1.1E-59 T 11-10-2018 IPR022050 Thermostable hemolysin AMS64_17515 d72bf81f375977c706cabbc5d770ae7f 168 Pfam PF00583 Acetyltransferase (GNAT) family 54 143 2.6E-13 T 11-10-2018 IPR000182 GNAT domain AMS64_17515 d72bf81f375977c706cabbc5d770ae7f 168 Gene3D G3DSA:3.40.630.30 5 157 8.7E-32 T 11-10-2018 AMS64_17515 d72bf81f375977c706cabbc5d770ae7f 168 SUPERFAMILY SSF55729 4 166 6.28E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_15560 59a826ad5db261b28b9778b469ae4efa 148 Pfam PF06891 P2 phage tail completion protein R (GpR) 11 115 8.4E-15 T 11-10-2018 IPR009678 Bacteriophage tail completion protein R AMS64_14740 2623fb9e5c2b4af238553b234f1f5824 127 Pfam PF09842 Predicted membrane protein (DUF2069) 9 111 2.1E-35 T 11-10-2018 IPR018643 Protein of unknown function DUF2069, membrane AMS64_21530 99f41ca2e713ca135c09109b7fef609b 128 PIRSF PIRSF005610 1 121 6.8E-29 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AMS64_21530 99f41ca2e713ca135c09109b7fef609b 128 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 122 1.7E-39 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AMS64_12070 5def950ce9e79e0508c021c8ded54519 105 Pfam PF05135 Phage gp6-like head-tail connector protein 4 93 9.2E-19 T 11-10-2018 IPR021146 Phage gp6-like head-tail connector protein AMS64_12070 5def950ce9e79e0508c021c8ded54519 105 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 5 100 3.0E-16 T 11-10-2018 IPR006450 Phage protein of unkonwn function AMS64_12070 5def950ce9e79e0508c021c8ded54519 105 Gene3D G3DSA:1.10.3230.30 1 100 1.3E-10 T 11-10-2018 AMS64_01950 c14cd7f205aeba612be7c420fa0ef26f 304 Pfam PF00892 EamA-like transporter family 157 286 1.6E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_01950 c14cd7f205aeba612be7c420fa0ef26f 304 Pfam PF00892 EamA-like transporter family 8 143 1.7E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMS64_01950 c14cd7f205aeba612be7c420fa0ef26f 304 SUPERFAMILY SSF103481 61 146 6.67E-11 T 11-10-2018 AMS64_01950 c14cd7f205aeba612be7c420fa0ef26f 304 SUPERFAMILY SSF103481 191 291 1.01E-8 T 11-10-2018 AMS64_11165 afcc2f5b79bdcf91ea5b719c070b877b 156 Pfam PF05433 Glycine zipper 2TM domain 61 99 3.0E-11 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AMS64_10725 d3726fa3a524d90311dac0877c925f60 347 Pfam PF13289 SIR2-like domain 131 277 2.3E-9 T 11-10-2018 IPR039444 SIR2-like domain AMS64_08560 0964ba05f59cad683523075c8a9fd866 83 Gene3D G3DSA:3.30.910.10 1 79 5.5E-26 T 11-10-2018 IPR036687 DinI-like superfamily AMS64_08560 0964ba05f59cad683523075c8a9fd866 83 Pfam PF06183 DinI-like family 14 76 2.7E-23 T 11-10-2018 IPR010391 DNA damage-inducible protein DinI-like AMS64_08560 0964ba05f59cad683523075c8a9fd866 83 SUPERFAMILY SSF54857 1 77 5.49E-23 T 11-10-2018 IPR036687 DinI-like superfamily AMS64_06405 b97e0bd16551131c207e2603f8b52db9 430 SUPERFAMILY SSF53474 271 387 5.03E-12 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMS64_20165 8c5cd9aa9631db391f65e95378176ab3 313 Pfam PF16074 Type IV Pilus-assembly protein W 181 305 2.5E-20 T 11-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 AMS64_10960 0e0ddb0e6a5fbc3ffb368bf2802818a1 183 Pfam PF01292 Prokaryotic cytochrome b561 8 181 1.1E-24 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMS64_10960 0e0ddb0e6a5fbc3ffb368bf2802818a1 183 SUPERFAMILY SSF81342 5 182 5.65E-29 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMS64_10690 23a24e66aa183a15f773785b4ace1ba4 284 Gene3D G3DSA:1.10.12.10 222 282 2.2E-16 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMS64_10690 23a24e66aa183a15f773785b4ace1ba4 284 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 277 2.1E-34 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMS64_10690 23a24e66aa183a15f773785b4ace1ba4 284 SUPERFAMILY SSF52096 16 279 2.64E-66 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMS64_10690 23a24e66aa183a15f773785b4ace1ba4 284 Gene3D G3DSA:3.90.226.10 16 221 1.0E-54 T 11-10-2018 AMS64_03000 3697104f711411fde15efda5e57252c4 235 SUPERFAMILY SSF101801 162 234 3.14E-11 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_03000 3697104f711411fde15efda5e57252c4 235 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 165 233 6.0E-13 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AMS64_03000 3697104f711411fde15efda5e57252c4 235 Gene3D G3DSA:2.30.330.10 157 234 5.8E-7 T 11-10-2018 IPR036429 SpoA-like superfamily AMS64_03995 9b1826ef4e8b8186ae3c195a5825416b 149 Pfam PF06853 Protein of unknown function (DUF1249) 29 142 2.7E-42 T 11-10-2018 IPR009659 Protein of unknown function DUF1249 AMS64_20890 ce3f4e82e27378cf600149e9f2d644db 354 Pfam PF11301 Protein of unknown function (DUF3103) 25 352 2.1E-135 T 11-10-2018 IPR021452 Protein of unknown function DUF3103 AMS64_09755 0178975dd03092bdf5225dbbc6310b53 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 2 82 2.9E-27 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 AMS64_09755 0178975dd03092bdf5225dbbc6310b53 101 SUPERFAMILY SSF47413 7 84 4.65E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_09755 0178975dd03092bdf5225dbbc6310b53 101 Gene3D G3DSA:1.10.260.40 1 81 1.7E-24 T 11-10-2018 AMS64_09755 0178975dd03092bdf5225dbbc6310b53 101 Pfam PF01381 Helix-turn-helix 18 57 6.1E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMS64_13975 f2258b3f8ac52458a67d0a0da75932b3 305 Pfam PF13737 Transposase DDE domain 19 130 1.9E-34 T 11-10-2018 IPR025668 Transposase DDE domain AMS64_03065 4f6b9ee609ada5d6db0726f52ae1326a 137 Pfam PF02050 Flagellar FliJ protein 21 131 8.9E-8 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AMS64_13930 0c6646c1a94f291627b5b026d61700e6 307 Gene3D G3DSA:3.40.50.1980 139 306 3.0E-46 T 11-10-2018 AMS64_13930 0c6646c1a94f291627b5b026d61700e6 307 SUPERFAMILY SSF53807 49 304 1.22E-54 T 11-10-2018 AMS64_13930 0c6646c1a94f291627b5b026d61700e6 307 Gene3D G3DSA:3.40.50.1980 29 137 5.5E-27 T 11-10-2018 AMS64_13930 0c6646c1a94f291627b5b026d61700e6 307 Pfam PF01497 Periplasmic binding protein 52 280 6.9E-29 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AMS64_00160 c1132ed8af2f55eee5eec29ebb79af93 100 Gene3D G3DSA:3.30.70.120 2 100 2.6E-27 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMS64_00160 c1132ed8af2f55eee5eec29ebb79af93 100 SUPERFAMILY SSF54913 1 100 1.86E-19 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMS64_13130 28313748a59c706b4837a64c45b47495 297 Gene3D G3DSA:3.30.54.10 168 293 1.0E-60 T 11-10-2018 AMS64_13130 28313748a59c706b4837a64c45b47495 297 Gene3D G3DSA:3.50.14.10 16 279 1.0E-60 T 11-10-2018 IPR036381 Replication terminator Tus, domain 1 GO:0003677|GO:0005737|GO:0006274 AMS64_13130 28313748a59c706b4837a64c45b47495 297 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 10 293 7.1E-94 T 11-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AMS64_13130 28313748a59c706b4837a64c45b47495 297 SUPERFAMILY SSF56596 11 294 7.45E-62 T 11-10-2018 IPR036384 Replication terminator Tus superfamily GO:0003677|GO:0005737|GO:0006274 AMS64_07220 752b1735f09e8887124f204b2e65cecf 412 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 3 397 2.2E-110 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AMS64_07220 752b1735f09e8887124f204b2e65cecf 412 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 321 341 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AMS64_07220 752b1735f09e8887124f204b2e65cecf 412 Pfam PF00860 Permease family 6 371 1.7E-94 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AMS64_05175 83c71806a36be83a95e63cb5528c5ad5 567 SUPERFAMILY SSF75304 1 561 1.57E-87 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMS64_05175 83c71806a36be83a95e63cb5528c5ad5 567 Gene3D G3DSA:3.90.1300.10 1 564 3.0E-101 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMS64_05175 83c71806a36be83a95e63cb5528c5ad5 567 Pfam PF01425 Amidase 463 544 4.5E-7 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMS64_05175 83c71806a36be83a95e63cb5528c5ad5 567 Pfam PF01425 Amidase 25 348 6.5E-47 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMS64_09440 d5c5143ce184c129a1e69dba39163c17 228 Pfam PF11205 Protein of unknown function (DUF2987) 31 171 6.3E-43 T 11-10-2018 IPR021370 Protein of unknown function DUF2987 AMS64_05295 0e2d96a4a0a4a352faa48ea36725a441 171 ProSitePatterns PS00893 Nudix box signature. 64 85 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMS64_05295 0e2d96a4a0a4a352faa48ea36725a441 171 Pfam PF00293 NUDIX domain 33 153 7.6E-19 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMS64_05295 0e2d96a4a0a4a352faa48ea36725a441 171 PRINTS PR00502 NUDIX hydrolase family signature 59 73 6.4E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMS64_05295 0e2d96a4a0a4a352faa48ea36725a441 171 PRINTS PR00502 NUDIX hydrolase family signature 73 88 6.4E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMS64_05295 0e2d96a4a0a4a352faa48ea36725a441 171 Gene3D G3DSA:3.90.79.10 30 169 1.4E-28 T 11-10-2018 AMS64_05295 0e2d96a4a0a4a352faa48ea36725a441 171 SUPERFAMILY SSF55811 2 165 2.57E-31 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMS64_03115 e4395c395bfe56038aa8d4e91f5d923f 223 PRINTS PR01008 Flagellar L-ring protein signature 162 178 3.1E-23 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_03115 e4395c395bfe56038aa8d4e91f5d923f 223 PRINTS PR01008 Flagellar L-ring protein signature 68 80 3.1E-23 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_03115 e4395c395bfe56038aa8d4e91f5d923f 223 PRINTS PR01008 Flagellar L-ring protein signature 183 197 3.1E-23 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_03115 e4395c395bfe56038aa8d4e91f5d923f 223 PRINTS PR01008 Flagellar L-ring protein signature 136 151 3.1E-23 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_03115 e4395c395bfe56038aa8d4e91f5d923f 223 PRINTS PR01008 Flagellar L-ring protein signature 199 213 3.1E-23 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_03115 e4395c395bfe56038aa8d4e91f5d923f 223 Pfam PF02107 Flagellar L-ring protein 47 219 7.9E-60 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_03115 e4395c395bfe56038aa8d4e91f5d923f 223 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 26.276 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMS64_05805 e2f44cc11f8c2834653128e54356cc4a 453 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 443 1.0E-28 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMS64_05805 e2f44cc11f8c2834653128e54356cc4a 453 SUPERFAMILY SSF56219 35 452 3.14E-18 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMS64_15200 a7799866995c45824171dc9c6f11d488 419 PRINTS PR00173 Glutamate-aspartate symporter signature 49 69 7.4E-38 T 11-10-2018 AMS64_15200 a7799866995c45824171dc9c6f11d488 419 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 7.4E-38 T 11-10-2018 AMS64_15200 a7799866995c45824171dc9c6f11d488 419 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 7.4E-38 T 11-10-2018 AMS64_15200 a7799866995c45824171dc9c6f11d488 419 PRINTS PR00173 Glutamate-aspartate symporter signature 355 375 7.4E-38 T 11-10-2018 AMS64_15200 a7799866995c45824171dc9c6f11d488 419 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 7.4E-38 T 11-10-2018 AMS64_15200 a7799866995c45824171dc9c6f11d488 419 PRINTS PR00173 Glutamate-aspartate symporter signature 79 104 7.4E-38 T 11-10-2018 AMS64_15200 a7799866995c45824171dc9c6f11d488 419 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 7.4E-38 T 11-10-2018 AMS64_15200 a7799866995c45824171dc9c6f11d488 419 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 7.4E-38 T 11-10-2018 AMS64_15200 a7799866995c45824171dc9c6f11d488 419 Pfam PF00375 Sodium:dicarboxylate symporter family 6 400 3.7E-110 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMS64_15200 a7799866995c45824171dc9c6f11d488 419 SUPERFAMILY SSF118215 6 402 2.62E-111 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_15200 a7799866995c45824171dc9c6f11d488 419 Gene3D G3DSA:1.10.3860.10 1 415 2.1E-114 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMS64_01490 c04f55f5e5210a8d2dfc62d7ae6705cf 371 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 342 1.9E-36 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMS64_21220 08441613836de6c20389af4b938d7bce 191 Pfam PF11726 Inovirus Gp2 41 172 1.2E-18 T 11-10-2018 AMS64_18340 d4e5fbac9a92087801ff44b1faa63972 213 SUPERFAMILY SSF56935 45 213 4.39E-7 T 11-10-2018 AMS64_10045 c55dd84d7156c4c8a87207e3d354c2d0 259 Pfam PF11859 Protein of unknown function (DUF3379) 1 254 1.7E-76 T 11-10-2018 IPR021806 Protein of unknown function DUF3379 AMS64_17490 1801cb6006eb4e1054a1cd62801aa8a8 72 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-6 T 11-10-2018 IPR009491 Protein of unknown function DUF1107 AMS64_17490 1801cb6006eb4e1054a1cd62801aa8a8 72 Gene3D G3DSA:3.30.1910.10 1 65 1.4E-10 T 11-10-2018 AMS64_17490 1801cb6006eb4e1054a1cd62801aa8a8 72 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 5.3E-20 T 11-10-2018 IPR009491 Protein of unknown function DUF1107 AMS64_04870 40903d0c7a6c487daac23a340cdf7e34 135 Gene3D G3DSA:3.30.1460.10 1 111 2.8E-15 T 11-10-2018 AMS64_04870 40903d0c7a6c487daac23a340cdf7e34 135 SUPERFAMILY SSF69635 2 123 2.98E-12 T 11-10-2018 AMS64_21880 13619c6429aaf6fe3b3c6f66a699eeaa 82 Pfam PF13670 Peptidase propeptide and YPEB domain 8 79 1.7E-8 T 11-10-2018 IPR025711 PepSY domain AMS64_12100 291bcd74aafe8e68c0eccc616f42c178 573 Gene3D G3DSA:3.40.50.300 34 261 8.0E-19 T 11-10-2018 AMS64_12100 291bcd74aafe8e68c0eccc616f42c178 573 Pfam PF03354 Phage Terminase 87 555 7.6E-73 T 11-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type AMS64_21595 1024f1044367661e4b44efb4abe6f01f 53 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 50 1.1E-19 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMS64_21595 1024f1044367661e4b44efb4abe6f01f 53 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 3 53 17.78 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMS64_21595 1024f1044367661e4b44efb4abe6f01f 53 Pfam PF02416 mttA/Hcf106 family 8 50 1.1E-14 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMS64_07990 9f9276e6b8fbda4662f0ce3ff193617e 468 PIRSF PIRSF019381 3 468 2.9E-184 T 11-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AMS64_07990 9f9276e6b8fbda4662f0ce3ff193617e 468 Pfam PF04317 YcjX-like family, DUF463 29 467 6.9E-175 T 11-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AMS64_21065 142b8523bd8f100e5c359e8cd3933a8d 134 Pfam PF11756 Nitrous oxide-stimulated promoter 25 126 6.6E-39 T 11-10-2018 IPR020483 Uncharacterised protein family YgbA AMS64_21065 142b8523bd8f100e5c359e8cd3933a8d 134 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 25 117 2.0E-22 T 11-10-2018 IPR020483 Uncharacterised protein family YgbA AMS64_07975 2e2440b33003ed04d49e57ed9fd6127e 228 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 216 6.9E-85 T 11-10-2018 IPR014319 Phage shock protein, PspA AMS64_07975 2e2440b33003ed04d49e57ed9fd6127e 228 Pfam PF04012 PspA/IM30 family 2 215 1.3E-43 T 11-10-2018 IPR007157 PspA/IM30 AMS64_09040 b50f09881c22131981a8f280bca027f1 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 2.0E-11 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AMS64_05025 d278fc8bf4e7564d860567c32e31318f 153 Pfam PF09523 Protein of unknown function (DUF2390) 23 117 1.1E-13 T 11-10-2018 IPR012659 Conserved hypothetical protein CHP02444 AMS64_20535 887b4b3b43f1f665d4529ed8ae1cae5e 107 Pfam PF08850 Domain of unknown function (DUF1820) 7 99 1.7E-39 T 11-10-2018 IPR014949 Protein of unknown function DUF1820 AMS64_14860 0b77d71d2d57211846f82a162498ddab 356 Pfam PF03773 Predicted permease 10 353 2.7E-52 T 11-10-2018 IPR005524 Predicted permease DUF318 AMS64_14285 2c7ec37aa71ae0afd37e74bee78f2698 94 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 86 1.6E-16 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AMS64_14285 2c7ec37aa71ae0afd37e74bee78f2698 94 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 20.594 T 11-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 AMS64_18295 178f53dae7e7a4496a77ded4f2e30380 158 Pfam PF11086 Protein of unknown function (DUF2878) 4 146 9.2E-33 T 11-10-2018 IPR021306 Protein of unknown function DUF2878 AMS64_09015 386c6caa216252bb2775ed08704a2c3e 469 Pfam PF00860 Permease family 46 429 1.1E-75 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AMS64_08565 0e7df76b707b7c8826337d02e2030975 269 Pfam PF11150 Protein of unknown function (DUF2927) 39 239 6.3E-62 T 11-10-2018 IPR021323 Protein of unknown function DUF2927 AMS64_03020 9dd82adda440924b860952ff1f395a21 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 25 46 2.2E-22 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_03020 9dd82adda440924b860952ff1f395a21 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 84 103 2.2E-22 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_03020 9dd82adda440924b860952ff1f395a21 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 183 205 2.2E-22 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_03020 9dd82adda440924b860952ff1f395a21 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 205 224 2.2E-22 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_03020 9dd82adda440924b860952ff1f395a21 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 18 255 3.8E-59 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AMS64_03020 9dd82adda440924b860952ff1f395a21 260 Pfam PF01311 Bacterial export proteins, family 1 18 248 1.4E-62 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMS64_11335 d4fbbd624a2b56c1d590bca26de7a469 141 Pfam PF10722 Putative bacterial sensory transduction regulator 2 122 1.6E-10 T 11-10-2018 IPR019660 Putative sensory transduction regulator YbjN AMS64_10400 33dc0853f84f3b672a3f3d8769580c5e 473 Pfam PF04932 O-Antigen ligase 241 378 1.1E-18 T 11-10-2018 IPR007016 O-antigen ligase-related AMS64_04470 538ea81b7365338506c9da2f8eb7a2b4 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.2E-156 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMS64_04470 538ea81b7365338506c9da2f8eb7a2b4 378 PIRSF PIRSF000267 2 377 7.1E-117 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMS64_04470 538ea81b7365338506c9da2f8eb7a2b4 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 360 8.9E-103 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMS64_06695 533b8fc50febabbf0bcc9e34ad34bb83 249 Pfam PF06889 Protein of unknown function (DUF1266) 47 225 1.9E-23 T 11-10-2018 IPR009677 Protein of unknown function DUF1266 AMS64_06330 5eb8a411fa6ee94489a4683d9ba3820f 222 Pfam PF05901 Excalibur calcium-binding domain 182 216 1.1E-10 T 11-10-2018 IPR008613 Excalibur calcium-binding domain AMS64_06330 5eb8a411fa6ee94489a4683d9ba3820f 222 Pfam PF00313 'Cold-shock' DNA-binding domain 4 75 1.4E-8 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMS64_06330 5eb8a411fa6ee94489a4683d9ba3820f 222 SUPERFAMILY SSF50249 1 79 5.39E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMS64_06330 5eb8a411fa6ee94489a4683d9ba3820f 222 SMART SM00357 4 78 2.0E-4 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMS64_06330 5eb8a411fa6ee94489a4683d9ba3820f 222 Gene3D G3DSA:2.40.50.140 1 79 2.2E-17 T 11-10-2018 AMS64_01390 c81721a5520fe2256b65d0fdc08a7053 414 Pfam PF04932 O-Antigen ligase 195 350 1.5E-18 T 11-10-2018 IPR007016 O-antigen ligase-related AMS64_11475 219d55223bff19c9481a8d7217c69b1b 280 SUPERFAMILY SSF52151 9 233 2.41E-35 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMS64_11475 219d55223bff19c9481a8d7217c69b1b 280 Gene3D G3DSA:3.40.1090.10 1 96 1.1E-9 T 11-10-2018 AMS64_11475 219d55223bff19c9481a8d7217c69b1b 280 Gene3D G3DSA:3.40.1090.10 97 234 1.4E-6 T 11-10-2018 AMS64_11475 219d55223bff19c9481a8d7217c69b1b 280 Pfam PF01734 Patatin-like phospholipase 10 175 3.1E-10 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMS64_03620 4a2f0785ae3aff38db680dc18e9a457d 221 Pfam PF09335 SNARE associated Golgi protein 48 172 1.8E-22 T 11-10-2018 IPR032816 SNARE associated Golgi protein AMS64_14375 81beb4671793b106e12ccc13eae411ab 135 Gene3D G3DSA:1.10.260.40 1 64 5.5E-7 T 11-10-2018 AMS64_14375 81beb4671793b106e12ccc13eae411ab 135 SUPERFAMILY SSF47413 3 62 9.5E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMS64_04305 3880b002d4032488c62a8e074cc55268 425 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 1 403 2.0E-118 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AMS64_04305 3880b002d4032488c62a8e074cc55268 425 Pfam PF05525 Branched-chain amino acid transport protein 1 414 1.6E-126 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AMS64_09725 098c2f5ef47a1c9fd4d2b2ca5945584a 200 Pfam PF04403 Paraquat-inducible protein A 43 197 6.6E-45 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AMS64_15680 a79589e61fb348f26d7dab9cec1f8423 163 Pfam PF06892 Phage regulatory protein CII (CP76) 9 160 8.2E-31 T 11-10-2018 IPR009679 Bacteriophage 186, CII AMS64_03845 b872d2204cffc793864b386d305d44af 141 Gene3D G3DSA:1.25.40.10 2 77 1.0E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_03845 b872d2204cffc793864b386d305d44af 141 SUPERFAMILY SSF48452 8 75 7.15E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_01495 6f30d706729af985519057bae7d0f2a0 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 296 3.0E-36 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMS64_20110 c699c495db183342967da76e7bf495e5 424 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 418 6.7E-74 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AMS64_20110 c699c495db183342967da76e7bf495e5 424 Pfam PF07670 Nucleoside recognition 99 195 1.3E-8 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AMS64_20110 c699c495db183342967da76e7bf495e5 424 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 7.9E-24 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AMS64_20110 c699c495db183342967da76e7bf495e5 424 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 418 1.1E-151 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AMS64_04465 574762ec942b44aa341c24439b8bf034 518 PIRSF PIRSF006446 2 334 7.8E-117 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMS64_04465 574762ec942b44aa341c24439b8bf034 518 PIRSF PIRSF006446 341 516 5.9E-33 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMS64_04465 574762ec942b44aa341c24439b8bf034 518 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 1.2E-177 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMS64_21460 2448f552dccaa2ed74e12dd69756d994 365 Pfam PF01699 Sodium/calcium exchanger protein 221 361 4.9E-9 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMS64_21460 2448f552dccaa2ed74e12dd69756d994 365 Pfam PF01699 Sodium/calcium exchanger protein 43 192 4.9E-18 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMS64_04720 46c9af978eb82b7199c1c4a44ff670dd 157 Pfam PF11736 Protein of unknown function (DUF3299) 54 152 1.7E-42 T 11-10-2018 IPR021727 Protein of unknown function DUF3299 AMS64_04720 46c9af978eb82b7199c1c4a44ff670dd 157 Gene3D G3DSA:2.40.50.870 21 157 2.5E-45 T 11-10-2018 AMS64_20875 cff87ed998e0e468d016b2570e88d207 398 Pfam PF05940 NnrS protein 15 392 9.9E-109 T 11-10-2018 IPR010266 NnrS AMS64_19285 72fde446e4c3ab622e1e01070a3013fd 130 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 125 29.826 T 11-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 AMS64_19285 72fde446e4c3ab622e1e01070a3013fd 130 Gene3D G3DSA:3.30.310.230 1 129 1.7E-50 T 11-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 AMS64_19285 72fde446e4c3ab622e1e01070a3013fd 130 Pfam PF07417 Transcriptional regulator Crl 4 119 4.0E-47 T 11-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 AMS64_02485 c4c2a782f378cfae0fca7fe1ff412d71 241 Pfam PF05944 Phage small terminase subunit 40 173 3.9E-36 T 11-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 AMS64_02465 8d1190148444d3d5fa65ecf1223b5192 151 Pfam PF10772 Protein of unknown function (DUF2597) 9 141 5.0E-60 T 11-10-2018 IPR019708 Bacteriophage HP1, Orf24 AMS64_17910 be46a0af7779c0d1625ee5fca634b2fa 140 Gene3D G3DSA:3.30.420.140 3 139 1.3E-43 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AMS64_17910 be46a0af7779c0d1625ee5fca634b2fa 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 3.8E-52 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMS64_17910 be46a0af7779c0d1625ee5fca634b2fa 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 25.683 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMS64_17910 be46a0af7779c0d1625ee5fca634b2fa 140 SMART SM00732 4 104 5.5E-41 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AMS64_17910 be46a0af7779c0d1625ee5fca634b2fa 140 Pfam PF03652 Holliday junction resolvase 5 136 5.7E-40 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMS64_17910 be46a0af7779c0d1625ee5fca634b2fa 140 SUPERFAMILY SSF53098 5 137 1.14E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMS64_16840 068a84886e7d10ba8a2af2e837fef6be 288 Gene3D G3DSA:3.10.129.90 1 287 1.3E-107 T 11-10-2018 AMS64_16840 068a84886e7d10ba8a2af2e837fef6be 288 Pfam PF13622 Thioesterase-like superfamily 33 283 2.1E-56 T 11-10-2018 AMS64_16840 068a84886e7d10ba8a2af2e837fef6be 288 SUPERFAMILY SSF54637 116 285 3.57E-58 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_16840 068a84886e7d10ba8a2af2e837fef6be 288 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 284 1.0E-96 T 11-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 AMS64_16840 068a84886e7d10ba8a2af2e837fef6be 288 SUPERFAMILY SSF54637 5 114 1.16E-39 T 11-10-2018 IPR029069 HotDog domain superfamily AMS64_13195 b1cb203e05040188558b68218f6babce 162 SUPERFAMILY SSF54001 39 160 6.54E-41 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMS64_13195 b1cb203e05040188558b68218f6babce 162 Gene3D G3DSA:3.90.1720.10 42 161 1.2E-42 T 11-10-2018 AMS64_13195 b1cb203e05040188558b68218f6babce 162 Pfam PF00877 NlpC/P60 family 55 159 1.1E-31 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AMS64_07100 f30c134a7b5d97dfd4f6556895954636 352 Pfam PF04632 Fusaric acid resistance protein family 20 347 9.8E-20 T 11-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 AMS64_12115 d47d6ae337096dbfab95db1db4bd2418 156 Pfam PF10721 Protein of unknown function (DUF2514) 7 153 7.5E-33 T 11-10-2018 IPR019659 Protein of unknown function DUF2514 AMS64_16185 47c56160c63b3d51bbf3e7770a0c87fb 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 81 267 3.1E-9 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMS64_16185 47c56160c63b3d51bbf3e7770a0c87fb 281 Gene3D G3DSA:3.60.10.10 56 278 1.9E-15 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMS64_16185 47c56160c63b3d51bbf3e7770a0c87fb 281 SUPERFAMILY SSF56219 60 274 3.66E-24 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMS64_16340 519a3715ea73ff3c7b392a7a5ca4243a 176 Pfam PF07509 Protein of unknown function (DUF1523) 6 168 1.2E-56 T 11-10-2018 IPR011088 Bacteriophage phiNM3, A0EWY4 AMS64_15300 f1644557ad0c1177bb5eb0135d5357b1 219 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 214 1.8E-48 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 AMS64_14905 a00bfde262dd11ffae0da943330a445e 319 Pfam PF06527 TniQ 7 154 1.4E-7 T 11-10-2018 IPR009492 TniQ AMS64_05660 3c77cc1e9caf4ffedc7b8fc62fef127c 211 Pfam PF13645 L,D-transpeptidase catalytic domain 46 210 1.1E-66 T 11-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase AMS64_19260 dc8d7d2141964f28a04ec87ec47f381f 89 Pfam PF09905 DNA-binding protein VF530 10 72 6.2E-37 T 11-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AMS64_19260 dc8d7d2141964f28a04ec87ec47f381f 89 Gene3D G3DSA:1.10.720.30 18 77 1.2E-33 T 11-10-2018 IPR036361 SAP domain superfamily AMS64_19840 498cc180296cb01d2657e041288e6e52 184 Pfam PF01292 Prokaryotic cytochrome b561 10 169 3.2E-22 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMS64_19840 498cc180296cb01d2657e041288e6e52 184 SUPERFAMILY SSF81342 6 169 5.49E-25 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMS64_12940 76b7d3fcf791238ebe070783f46d5d2b 86 Gene3D G3DSA:3.40.630.30 1 86 2.4E-20 T 11-10-2018 AMS64_12940 76b7d3fcf791238ebe070783f46d5d2b 86 Pfam PF14542 GCN5-related N-acetyl-transferase 13 84 3.0E-18 T 11-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AMS64_12940 76b7d3fcf791238ebe070783f46d5d2b 86 SUPERFAMILY SSF55729 2 84 6.36E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMS64_08410 cf18c51067ac57c735db630b4e1e171a 258 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 1.2E-43 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMS64_20955 4834f470d76349d1c3bae363fe1fe945 147 Pfam PF10627 Curli assembly protein CsgE 42 146 1.5E-34 T 11-10-2018 IPR018900 Curli assembly protein CsgE AMS64_15025 b8ae416772fb1b0dd1978be4f7e05450 320 Pfam PF03186 CobD/Cbib protein 23 289 6.1E-20 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AMS64_22240 26a6d13163c743ae4e10a872cd57fca0 468 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 461 2.7E-131 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AMS64_02310 a21288bcdb7fb5d440a67b3000d75153 88 Pfam PF07383 Protein of unknown function (DUF1496) 18 67 5.7E-18 T 11-10-2018 IPR009971 Protein of unknown function DUF1496 AMS64_09255 52215b9b3ee664cdfb9326da7933fa24 83 Pfam PF06945 Protein of unknown function (DUF1289) 11 57 3.5E-19 T 11-10-2018 IPR010710 Protein of unknown function DUF1289 AMS64_15890 49dc4920b7f321f94274709f20ef15c3 130 Pfam PF11042 Protein of unknown function (DUF2750) 22 121 3.2E-37 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 AMS64_04155 d0b34b23f311886f7c488b588f11ba85 224 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 62 167 6.5E-13 T 11-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted AMS64_04155 d0b34b23f311886f7c488b588f11ba85 224 Gene3D G3DSA:3.10.620.30 28 218 2.3E-65 T 11-10-2018 AMS64_08925 256eeded16f727e3e569e4d8b9e02c99 334 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 156 254 9.0E-10 T 11-10-2018 IPR024534 Domain of unknown function DUF2220 AMS64_09720 d57acc20dfb4f4027da43850ac4e3a30 208 Pfam PF04403 Paraquat-inducible protein A 47 197 3.7E-32 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AMS64_11120 98fc92f89e908dad0091d448ec286546 162 Pfam PF02674 Colicin V production protein 4 142 4.8E-37 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AMS64_05970 4b4deba037408e924be0cb39b9e12a11 727 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 335 686 9.6E-8 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMS64_05970 4b4deba037408e924be0cb39b9e12a11 727 SUPERFAMILY SSF56219 324 695 1.1E-30 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMS64_11895 6747e3572ac0f9d5d37f1a4ab53807f5 265 Pfam PF14091 Domain of unknown function (DUF4269) 49 209 3.9E-34 T 11-10-2018 IPR025365 Protein of unknown function DUF4269 AMS64_03480 1205631e96f605260cb9660536483ac6 304 Pfam PF16162 Domain of unknown function (DUF4868) 121 280 1.0E-13 T 11-10-2018 IPR032359 Protein of unknown function DUF4868 AMS64_04300 e4daec2de35ed23b7713a107c56aa654 419 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 1 398 7.5E-127 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AMS64_04300 e4daec2de35ed23b7713a107c56aa654 419 Pfam PF05525 Branched-chain amino acid transport protein 1 409 4.5E-137 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AMS64_16085 d985c518f8da1346927ed2c8043d746f 98 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 4.5E-5 T 11-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AMS64_17750 c510fa3328859a6258512624681e81f5 148 Pfam PF16743 Periplasmic lysozyme inhibitor of I-type lysozyme 25 145 1.0E-41 T 11-10-2018 IPR031948 Periplasmic lysozyme inhibitor, I-type AMS64_17750 c510fa3328859a6258512624681e81f5 148 Gene3D G3DSA:2.40.128.460 22 148 2.5E-48 T 11-10-2018 IPR038643 PliI superfamily AMS64_17025 d776f89cc67d9a6a7ebc974b7b2875a8 226 Pfam PF04519 Polymer-forming cytoskeletal 79 175 1.5E-18 T 11-10-2018 IPR007607 Bactofilin A/B AMS64_10035 01900e3877035a987173c91c041d3e11 503 Pfam PF13584 Oxygen tolerance 31 371 4.4E-26 T 11-10-2018 IPR025738 Aerotolerance-related protein BatD AMS64_11855 957e71b6403b27db1a1a7b46eaf968b1 334 Pfam PF14351 Domain of unknown function (DUF4401) 27 326 6.4E-62 T 11-10-2018 IPR025513 Domain of unknown function DUF4401 AMS64_15380 4027444bf557d4e137cbb430e8ce5272 279 Pfam PF04116 Fatty acid hydroxylase superfamily 85 219 6.5E-29 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AMS64_15895 40897ad4813a11222424ee938546e64c 182 SUPERFAMILY SSF82829 71 143 3.14E-5 T 11-10-2018 AMS64_00800 558ad90c9f75e90a07ba204e7fc6b6d2 85 Pfam PF04380 Membrane fusogenic activity 1 78 2.4E-30 T 11-10-2018 IPR007475 Membrane fusogenic activity AMS64_20130 46131d2564835e7426a819ac6bab3182 200 Gene3D G3DSA:1.10.530.10 35 188 4.6E-13 T 11-10-2018 AMS64_20130 46131d2564835e7426a819ac6bab3182 200 SUPERFAMILY SSF53955 17 183 2.39E-25 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_21520 02f119f332c2edceb37f62391fc3a674 103 Pfam PF06611 Protein of unknown function (DUF1145) 5 60 1.3E-16 T 11-10-2018 IPR009525 Protein of unknown function DUF1145 AMS64_06905 6bf0ca95a5ee31e01fdae29ba6f2d0a8 390 Pfam PF07690 Major Facilitator Superfamily 19 342 3.2E-34 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMS64_06905 6bf0ca95a5ee31e01fdae29ba6f2d0a8 390 SUPERFAMILY SSF103473 13 388 2.22E-52 T 11-10-2018 IPR036259 MFS transporter superfamily AMS64_06905 6bf0ca95a5ee31e01fdae29ba6f2d0a8 390 Gene3D G3DSA:1.20.1250.20 13 199 5.8E-21 T 11-10-2018 AMS64_06905 6bf0ca95a5ee31e01fdae29ba6f2d0a8 390 Gene3D G3DSA:1.20.1250.20 210 389 1.5E-20 T 11-10-2018 AMS64_09740 bbc645c160f9b4d0823ceebbeaecc8c7 94 Pfam PF10723 Replication regulatory protein RepB 10 68 6.0E-7 T 11-10-2018 IPR019661 Replication regulatory protein RepA2 GO:0006276 AMS64_07910 6d3eb167ac458f77a023064ff18b4765 88 Pfam PF01527 Transposase 2 71 3.1E-19 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMS64_07910 6d3eb167ac458f77a023064ff18b4765 88 SUPERFAMILY SSF46689 1 72 3.94E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_08595 a7f17b996f61bb9137a85397c857f0a6 198 Pfam PF06037 Bacterial protein of unknown function (DUF922) 39 191 4.4E-29 T 11-10-2018 IPR010321 Protein of unknown function DUF922 AMS64_02625 ed0d571d0c04a1bed018778c80835ab2 207 Pfam PF16357 Putative PepSY_TM-like 13 205 1.2E-11 T 11-10-2018 IPR032307 Putative PepSY TM-like protein AMS64_20470 ce67af5483c21da6c1ab8b34bd387919 276 Pfam PF02517 CAAX protease self-immunity 175 263 6.6E-19 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMS64_21640 7c45ac30f56164475aac269adcdfc7f7 208 Pfam PF07947 YhhN family 26 206 9.2E-52 T 11-10-2018 IPR012506 YhhN-like GO:0016021 AMS64_14485 934648d0f3867b64442f8be2fc332558 479 Pfam PF07603 Protein of unknown function (DUF1566) 283 431 1.3E-14 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 AMS64_13410 6a1d57c6f13179cd5e220e9487536169 132 SUPERFAMILY SSF46689 9 105 1.04E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMS64_20800 1f8feb1e330d5b223fde1a02d42c1674 90 Pfam PF10719 Late competence development protein ComFB 8 86 6.7E-19 T 11-10-2018 IPR019657 Late competence development protein ComFB AMS64_05320 bdf3782c06f0924a0ca43304444a5ba1 733 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 362 685 1.5E-117 T 11-10-2018 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 AMS64_01615 ee8d4b9ebd5d6e4604a85b2065b5abfd 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 325 4.2E-47 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMS64_07445 5b77e695b33acd117ce8c7039abdb07a 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 3.0E-19 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AMS64_07445 5b77e695b33acd117ce8c7039abdb07a 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 7.2E-17 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AMS64_00830 a6780e61bbeb2b357a3a4e010f22aa0b 422 Pfam PF11862 Domain of unknown function (DUF3382) 4 108 3.3E-13 T 11-10-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AMS64_00830 a6780e61bbeb2b357a3a4e010f22aa0b 422 Pfam PF02653 Branched-chain amino acid transport system / permease component 117 403 9.8E-53 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMS64_18095 e57dab1a8f673f7eb2129d6165580c16 346 Pfam PF12069 Protein of unknown function (DUF3549) 7 343 8.1E-120 T 11-10-2018 IPR021936 Protein of unknown function DUF3549 AMS64_12120 d3d1c6abb5d2f922cd226d69a68e3d48 172 Gene3D G3DSA:1.10.530.40 1 158 1.6E-49 T 11-10-2018 AMS64_12120 d3d1c6abb5d2f922cd226d69a68e3d48 172 Pfam PF00959 Phage lysozyme 37 150 1.7E-22 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AMS64_12120 d3d1c6abb5d2f922cd226d69a68e3d48 172 SUPERFAMILY SSF53955 6 157 7.67E-45 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMS64_17000 64bd8dc848a9f8bc697b2f4373c0833b 123 Pfam PF16358 RcsF lipoprotein 33 120 1.9E-17 T 11-10-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 AMS64_17000 64bd8dc848a9f8bc697b2f4373c0833b 123 Gene3D G3DSA:3.30.110.70 22 122 3.9E-30 T 11-10-2018 AMS64_06020 1309daff9508d16d8df578a2fab32d9b 110 Pfam PF04320 Protein with unknown function (DUF469) 6 106 9.4E-40 T 11-10-2018 IPR007416 Protein of unknown function DUF469 AMS64_19565 b838b5fd087eedfe90beefe905e23420 146 Pfam PF04217 Protein of unknown function, DUF412 8 144 3.5E-55 T 11-10-2018 IPR007334 Uncharacterised protein family UPF0208 AMS64_20405 f9918cf685e93ed4047b305820bea556 183 Pfam PF02325 YGGT family 107 172 3.8E-19 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 AMS64_20405 f9918cf685e93ed4047b305820bea556 183 Pfam PF02325 YGGT family 9 78 2.2E-21 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 AMS64_20550 8503c4c6489341f41579ba97863bb9dc 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 3 100 5.3E-14 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD AMS64_06050 37c35a1a40327c4a2c7a9b4ffe593603 111 Pfam PF11333 Protein of unknown function (DUF3135) 2 81 1.3E-26 T 11-10-2018 IPR021482 Protein of unknown function DUF3135 AMS64_01460 38ad2944e9ebdef2c400de97c062e316 65 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 4.1E-35 T 11-10-2018 IPR017704 Putative selenium-binding protein YdfZ AMS64_01460 38ad2944e9ebdef2c400de97c062e316 65 Pfam PF14001 YdfZ protein 2 65 8.3E-33 T 11-10-2018 IPR017704 Putative selenium-binding protein YdfZ AMS64_19655 1780195d2345db208832b3fb7d9deced 210 PIRSF PIRSF006324 1 210 1.5E-51 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMS64_19655 1780195d2345db208832b3fb7d9deced 210 Pfam PF01810 LysE type translocator 17 208 1.2E-36 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMS64_15070 3a64e70eeae0f4ff637d773640a796bf 695 Pfam PF01973 Protein of unknown function DUF115 296 458 3.9E-28 T 11-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like AMS64_02495 0bf14af42aa45cdce252aabccfd0616b 297 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 5 130 3.8E-34 T 11-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 AMS64_03145 347809100a620eacbe90890265009c97 390 ProDom PD035357 TRANSFERASE 2.1.1.- LYSINE METHYLTRANSFERASE N-METHYLTRANSFERASE FLAGELLUM LYSINE-N-METHYLASE BIOSYNTHETIC FLAGELLIN N-METHYLATION 246 386 4.0E-7 T 11-10-2018 IPR020193 Flagellin lysine-N-methylase, C-terminal AMS64_08630 a9f8f1420a5e347a9191be78d540813c 215 Pfam PF09335 SNARE associated Golgi protein 49 174 3.5E-23 T 11-10-2018 IPR032816 SNARE associated Golgi protein AMS64_09065 214935dd8b07580cc7ead813a64a6953 511 SUPERFAMILY SSF52540 39 287 2.88E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMS64_09065 214935dd8b07580cc7ead813a64a6953 511 Pfam PF07693 KAP family P-loop domain 35 317 6.1E-39 T 11-10-2018 IPR011646 KAP family P-loop domain AMS64_14340 2c6d61332ffa9476e988951acc1c8493 521 Pfam PF03806 AbgT putative transporter family 20 518 4.5E-199 T 11-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AMS64_11395 5895d4ea2f9d40181dbeb19cb83354b9 474 Pfam PF03600 Citrate transporter 44 419 4.2E-55 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AMS64_07765 1deeb08ad66788b911f112a240b5f27c 397 Pfam PF04888 Secretion system effector C (SseC) like family 104 392 1.3E-40 T 11-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 AMS64_13790 1deeb08ad66788b911f112a240b5f27c 397 Pfam PF04888 Secretion system effector C (SseC) like family 104 392 1.3E-40 T 11-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 AMS64_08975 f6f7a1233c859589e847d7ce16aa3cfa 278 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 31 261 3.5E-81 T 11-10-2018 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC AMS64_03810 afbdd3eccceda82d9bda78272a7ee47c 703 Pfam PF05960 Bacterial protein of unknown function (DUF885) 63 694 1.0E-100 T 11-10-2018 IPR010281 Protein of unknown function DUF885 AMS64_03640 8341445baabed206f3279869768b85be 316 Pfam PF03547 Membrane transport protein 16 148 2.9E-8 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AMS64_03640 8341445baabed206f3279869768b85be 316 Pfam PF03547 Membrane transport protein 165 304 1.2E-7 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AMS64_12225 87d22db314db94c5a2549d6e96ca215b 219 Pfam PF06992 Replication protein P 26 129 2.1E-10 T 11-10-2018 IPR009731 Replication P GO:0006270 AMS64_10175 14d1b3ecc09a342a8c3d277b8c29e937 228 Pfam PF04172 LrgB-like family 10 222 1.1E-73 T 11-10-2018 IPR007300 CidB/LrgB family AMS64_08875 c2ae94cad70f3c0f0c8cbcf5c3c175d1 256 Pfam PF02698 DUF218 domain 81 244 2.6E-24 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AMS64_01335 dcd76d6ec91ec3334c81aa1f740e1da8 144 Pfam PF02657 Fe-S metabolism associated domain 21 141 2.7E-42 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AMS64_01335 dcd76d6ec91ec3334c81aa1f740e1da8 144 SUPERFAMILY SSF82649 7 143 2.04E-45 T 11-10-2018 AMS64_01335 dcd76d6ec91ec3334c81aa1f740e1da8 144 Gene3D G3DSA:3.90.1010.10 3 144 1.0E-45 T 11-10-2018 AMS64_12170 1790cfe8945dde2de9ba62f0d17eebb3 329 Pfam PF06147 Protein of unknown function (DUF968) 142 326 7.4E-41 T 11-10-2018 IPR010373 Protein of unknown function DUF968 AMS64_22400 15b36c0be055efcca1e371d1a1da028c 446 Pfam PF02646 RmuC family 132 428 5.2E-105 T 11-10-2018 IPR003798 DNA recombination RmuC AMS64_07400 93d7de6fc268eaebeabb9a3e85e7853e 245 Pfam PF01618 MotA/TolQ/ExbB proton channel family 97 207 4.5E-23 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMS64_07150 af697df26cb6a1656dbd2f1c17f386b0 184 Pfam PF11749 Protein of unknown function (DUF3305) 32 139 9.8E-18 T 11-10-2018 IPR021736 Protein of unknown function DUF3305 AMS64_03545 358d52b3938e86d47fe42ff21e85cecd 229 Pfam PF04172 LrgB-like family 14 224 5.9E-70 T 11-10-2018 IPR007300 CidB/LrgB family AMS64_01670 fe623788bc6cb590f43861fca01104ac 148 Pfam PF06127 Protein of unknown function (DUF962) 1 143 2.4E-22 T 11-10-2018 IPR009305 Protein of unknown function DUF962 AMS64_10645 7ab6edd1f4c3de53dca2fb0736143971 262 Pfam PF01925 Sulfite exporter TauE/SafE 7 257 5.2E-52 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMS64_21560 7ea4e205ac2c86119b3ef6daba62fd34 143 SUPERFAMILY SSF52833 23 98 1.66E-5 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMS64_21560 7ea4e205ac2c86119b3ef6daba62fd34 143 Pfam PF04214 Protein of unknown function, DUF 50 117 2.2E-31 T 11-10-2018 IPR007332 Protein of unknown function DUF411 AMS64_17280 f10dd6ff2cbbe95d4f100e79440c2c63 218 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 18 213 2.5E-46 T 11-10-2018 IPR006214 Bax inhibitor 1-related AMS64_15235 86e66c8eb64f02bbe963958e57130bce 478 SUPERFAMILY SSF48452 134 274 8.04E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMS64_12045 89f91050537b6e280a152313a0f3d950 148 Pfam PF16463 Phage tail tube protein family 11 143 4.9E-9 T 11-10-2018 IPR032493 Phage tail tube protein family AMS64_20930 b104cf98f62149524f6c0b1528647329 141 Gene3D G3DSA:2.60.40.2420 42 139 4.0E-8 T 11-10-2018 AMS64_08330 966f7b90d5760807c5663c4ace54226d 209 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 22 206 4.7E-28 T 11-10-2018 IPR018728 Domain of unknown function DUF2268 AMS64_21525 30bd9535ad7b446fc9cd2d3aa5a11ade 328 Pfam PF13280 WYL domain 154 325 7.4E-15 T 11-10-2018 IPR026881 WYL domain AMS64_10715 39fc133dc7dc2043f32ae111d6fa6a4b 1000 Pfam PF05359 Domain of Unknown Function (DUF748) 612 758 7.8E-35 T 11-10-2018 IPR008023 Protein of unknown function DUF748 AMS64_10715 39fc133dc7dc2043f32ae111d6fa6a4b 1000 Pfam PF05359 Domain of Unknown Function (DUF748) 397 551 7.0E-27 T 11-10-2018 IPR008023 Protein of unknown function DUF748 AMS64_10715 39fc133dc7dc2043f32ae111d6fa6a4b 1000 Pfam PF05359 Domain of Unknown Function (DUF748) 158 312 1.0E-25 T 11-10-2018 IPR008023 Protein of unknown function DUF748 AMS64_06575 90a59b7c855fc11fdf9fbbe2ca65a1d5 192 Pfam PF05137 Fimbrial assembly protein (PilN) 100 175 2.7E-15 T 11-10-2018 IPR007813 Fimbrial assembly PilN AMS64_20105 3aa0a763104bb51764a19677c75a5264 56 TIGRFAM TIGR03510 XapX: XapX domain 3 50 3.7E-20 T 11-10-2018 IPR020017 XapX domain AMS64_02580 b53f98f44ecc6a67d89ca1f8509a8d74 187 SUPERFAMILY SSF46785 114 175 4.42E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMS64_05315 509e89e60ec00643fe8fe1bd5cfa7d3e 276 Pfam PF11060 Protein of unknown function (DUF2861) 35 274 7.4E-25 T 11-10-2018 IPR021290 Protein of unknown function DUF2861 AMS64_22130 e8d2e8733e32f9e12736f8d9970b7011 395 Pfam PF04865 Baseplate J-like protein 84 307 9.5E-20 T 11-10-2018 IPR006949 Baseplate protein J-like AMS64_15510 e8d2e8733e32f9e12736f8d9970b7011 395 Pfam PF04865 Baseplate J-like protein 84 307 9.5E-20 T 11-10-2018 IPR006949 Baseplate protein J-like AMS64_07860 814504c2a52a878f9889037811808a38 149 SUPERFAMILY SSF69635 16 134 2.51E-5 T 11-10-2018 AMS64_17270 1b309bd820637848d58f02ca479377fe 255 Pfam PF01203 Type II secretion system (T2SS), protein N 42 250 8.8E-52 T 11-10-2018 IPR022792 Type II secretion system, protein N AMS64_21500 e31007bf8e145742187c340858f55a4e 317 PIRSF PIRSF003097 19 313 3.5E-71 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 AMS64_15255 f3d35dd3daa71dbdcc17363cb2d763ec 285 PIRSF PIRSF028200 10 285 2.5E-61 T 11-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 AMS64_18420 45afac416415c448d035a8aab0df39f9 192 Pfam PF04970 Lecithin retinol acyltransferase 7 106 7.0E-6 T 11-10-2018 IPR007053 LRAT-like domain AMS64_15160 ab28a5620f84f93529a7ebee00f0483c 213 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 6 201 5.6E-10 T 11-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 AMS64_09210 4adc5daaa626437d9bfed7bf74065a00 489 Pfam PF01384 Phosphate transporter family 30 477 1.8E-81 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AMS64_20040 8bdc0c0cd96c84d1b8d1ee467a0e8a90 147 Pfam PF05232 Chlorhexidine efflux transporter 7 66 1.6E-17 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter AMS64_20040 8bdc0c0cd96c84d1b8d1ee467a0e8a90 147 Pfam PF05232 Chlorhexidine efflux transporter 79 139 2.4E-17 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter AMS64_16960 c4b8d96ce936416be1b1316ccd211c06 159 SUPERFAMILY SSF56925 48 159 2.2E-6 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMS64_14445 918b08a6b7806d14ebadc0317fba39b7 305 Pfam PF13737 Transposase DDE domain 19 130 3.2E-39 T 11-10-2018 IPR025668 Transposase DDE domain AMS64_11420 a23fb9e064e892627466f682e4f64359 346 Pfam PF16162 Domain of unknown function (DUF4868) 137 326 9.9E-25 T 11-10-2018 IPR032359 Protein of unknown function DUF4868 AMS64_15610 dac7506259b925edcf3818271c067eb4 76 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 3 62 2.0E-17 T 11-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system AMS64_22465 520e3f0f7d9f75145d9241ee891fc728 344 Pfam PF04143 Sulphur transport 20 333 5.8E-42 T 11-10-2018 IPR007272 Sulphur transport domain AMS64_12245 111f9f70743119407cc5fd19c52e777b 168 Pfam PF06892 Phage regulatory protein CII (CP76) 29 139 6.2E-14 T 11-10-2018 IPR009679 Bacteriophage 186, CII AMS64_06480 85e62d1f7c73597d503ccd2d72f744c8 155 Pfam PF07670 Nucleoside recognition 31 122 3.9E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AMS64_01130 dd5acfaae571c6b98a3b0a3869dde766 562 SUPERFAMILY SSF56349 205 401 7.36E-5 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMS64_19865 b57fb16ea9d26a4463e58e93d76e9aa8 79 Pfam PF03889 Domain of unknown function 27 62 1.1E-21 T 11-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344