APE_0002 IPR005149 Transcription regulator PadR N-terminal APE_0002 IPR036388 APE_0002 APE_0002 IPR036390 APE_0002 APE_0004 IPR003675 CAAX amino terminal protease APE_0009.1 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ APE_0009.1 IPR006121 Heavy metal-associated domain, HMA APE_0009.1 IPR017969 Heavy-metal-associated, conserved site APE_0009.1 IPR036163 APE_0009.1 APE_0010.1 IPR002293 Amino acid/polyamine transporter I APE_0010.1 IPR002934 Nucleotidyl transferase domain APE_0011.1 IPR002915 DeoC/FbaB/ lacD aldolase APE_0011.1 IPR013785 Aldolase-type TIM barrel APE_0012 IPR002139 Ribokinase APE_0012 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site APE_0012 IPR011611 Carbohydrate kinase PfkB APE_0012 IPR029056 Ribokinase-like APE_0013.1 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase APE_0013.1 IPR004404 Dihydroxy-acid dehydratase APE_0013.1 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site APE_0013.1 IPR037237 APE_0013.1 APE_0017.1 IPR000577 APE_0017.1 APE_0017.1 IPR018483 Carbohydrate kinase, FGGY, conserved site APE_0017.1 IPR018484 Carbohydrate kinase, FGGY, N-terminal APE_0017.1 IPR018485 Carbohydrate kinase, FGGY, C-terminal APE_0020.1 IPR002129 Pyridoxal phosphate-dependent decarboxylase APE_0020.1 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_0020.1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_0020.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_0023.1 IPR010033 HAD-superfamily phosphatase, subfamily IIIC APE_0023.1 IPR010036 Magnesium-dependent phosphatase-1, eukaryotic/arcaheal type APE_0023.1 IPR023214 HAD-like domain APE_0023.1 IPR036412 APE_0023.1 APE_0025.1 IPR002831 Transcription regulator TrmB, N-terminal APE_0025.1 IPR036388 APE_0025.1 APE_0025.1 IPR036390 APE_0025.1 APE_0026 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding APE_0026 IPR013815 ATP-grasp fold, subdomain 1 APE_0028 IPR008279 PEP-utilising enzyme, mobile domain APE_0028 IPR036637 APE_0028 APE_0031.1 IPR011701 Major facilitator superfamily APE_0031.1 IPR036259 APE_0031.1 APE_0033.1 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising APE_0033.1 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal APE_0033.1 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal APE_0035.1 IPR006059 Bacterial extracellular solute-binding, family 1 APE_0038.1 IPR000515 MetI-like domain APE_0038.1 IPR035906 APE_0038.1 APE_0040.1 IPR000515 MetI-like domain APE_0040.1 IPR035906 APE_0040.1 APE_0043.1 IPR003439 ABC transporter-like APE_0043.1 IPR003593 AAA+ ATPase domain APE_0043.1 IPR005116 Transport-associated OB, type 1 APE_0043.1 IPR008995 Molybdate/tungstate binding, C-terminal APE_0043.1 IPR017871 ABC transporter, conserved site APE_0043.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0045 IPR005673 ABC transporter, phosphate-binding protein PstS APE_0045 IPR024370 PBP domain APE_0047.1 IPR000515 MetI-like domain APE_0047.1 IPR011864 Phosphate ABC transporter, permease protein PstC APE_0047.1 IPR035906 APE_0047.1 APE_0048 IPR000515 MetI-like domain APE_0048 IPR005672 Phosphate transport system permease protein PstA APE_0048 IPR035906 APE_0048 APE_0050 IPR003439 ABC transporter-like APE_0050 IPR003593 AAA+ ATPase domain APE_0050 IPR017871 ABC transporter, conserved site APE_0050 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0051 IPR026022 PhoU domain APE_0051 IPR038078 APE_0051 APE_0053.1 IPR011234 Fumarylacetoacetase, C-terminal-related APE_0053.1 IPR036663 APE_0053.1 APE_0055 IPR004680 Citrate transporter-like domain APE_0056.1 IPR001753 Crotonase superfamily APE_0056.1 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APE_0056.1 IPR029045 ClpP/crotonase-like domain APE_0060.1 IPR000836 Phosphoribosyltransferase domain APE_0060.1 IPR001387 Cro/C1-type helix-turn-helix domain APE_0060.1 IPR010982 Lambda repressor-like, DNA-binding domain APE_0060.1 IPR029057 Phosphoribosyltransferase-like APE_0061.1 IPR003760 Basic membrane lipoprotein APE_0061.1 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APE_0063 IPR003439 ABC transporter-like APE_0063 IPR003593 AAA+ ATPase domain APE_0063 IPR017871 ABC transporter, conserved site APE_0063 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0065 IPR001851 ABC transporter, permease APE_0067.1 IPR001851 ABC transporter, permease APE_0067a IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis APE_0067a IPR036105 APE_0067a APE_0069.1 IPR023537 Deoxyuridine triphosphate nucleotidohydrolase, archaeal APE_0069.1 IPR029054 dUTPase-like APE_0069.1 IPR036157 APE_0069.1 APE_0071.1 IPR000572 Oxidoreductase, molybdopterin-binding domain APE_0071.1 IPR036374 APE_0071.1 APE_0072 IPR002541 Cytochrome c assembly protein APE_0072 IPR003557 Cytochrome c-type biogenesis protein CcmC APE_0073.1 IPR000241 Putative RNA methylase domain APE_0073.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0076.1 IPR000620 Drug/metabolite transporter APE_0077 IPR001453 Molybdopterin binding domain APE_0077 IPR012245 Molybdenum cofactor biosynthesis protein MoaB APE_0077 IPR036425 APE_0077 APE_0079 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic APE_0079 IPR016067 S-adenosylmethionine decarboxylase, core APE_0079 IPR017716 S-adenosylmethionine decarboxylase proenzyme APE_0079 IPR027549 Arginine decarboxylase proenzyme APE_0080.1 IPR002789 Domain of unknown function DUF87 APE_0080.1 IPR003593 AAA+ ATPase domain APE_0080.1 IPR018538 HerA-ATP synthase, barrel domain APE_0080.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0082.1 IPR018977 NurA domain APE_0084.1 IPR000415 Nitroreductase-like APE_0084.1 IPR016446 Flavin oxidoreductase Frp family APE_0084.1 IPR029479 Nitroreductase APE_0085.1 IPR003141 Polymerase/histidinol phosphatase, N-terminal APE_0085.1 IPR004013 PHP, C-terminal APE_0085.1 IPR016195 Polymerase/histidinol phosphatase-like APE_0085a IPR036249 APE_0085a APE_0086 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APE_0086 IPR024706 Peroxiredoxin, AhpC-type APE_0086 IPR036249 APE_0086 APE_0087.1 IPR018686 Protein of unknown function DUF2175 APE_0088.1 IPR007159 AbrB-like domain APE_0088.1 IPR037914 APE_0088.1 APE_0089.1 IPR002510 TldD/PmbA APE_0089.1 IPR025502 TldD APE_0089.1 IPR035068 APE_0089.1 APE_0089.1 IPR036059 APE_0089.1 APE_0091 IPR002510 TldD/PmbA APE_0091 IPR036059 APE_0091 APE_0092.1 IPR000286 Histone deacetylase superfamily APE_0092.1 IPR023696 Ureohydrolase domain APE_0092.1 IPR023801 Histone deacetylase domain APE_0092.1 IPR037138 APE_0092.1 APE_0093.1 IPR007159 AbrB-like domain APE_0093.1 IPR037914 APE_0093.1 APE_0097.1 IPR007362 Protein of unknown function DUF429 APE_0097.1 IPR018036 Protein of unknown function DUF429, subgroup APE_0099 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain APE_0099 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain APE_0099 IPR006172 DNA-directed DNA polymerase, family B APE_0099 IPR012337 Ribonuclease H-like domain APE_0099 IPR017964 DNA-directed DNA polymerase, family B, conserved site APE_0099 IPR023211 DNA polymerase, palm domain APE_0099 IPR036397 APE_0099 APE_0101.1 IPR004017 Cysteine-rich domain APE_0101.1 IPR009051 Alpha-helical ferredoxin APE_0101.1 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_0101.1 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_0101.1 IPR036197 APE_0101.1 APE_0103.1 IPR002068 Alpha crystallin/Hsp20 domain APE_0103.1 IPR008978 HSP20-like chaperone APE_0104.1 IPR019151 Proteasome assembly chaperone 2 APE_0104.1 IPR038389 APE_0104.1 APE_0105 IPR010914 EngC GTPase APE_0105 IPR016478 GTPase, MTG1 APE_0105 IPR023179 GTP-binding protein, orthogonal bundle domain APE_0105 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0107 IPR002789 Domain of unknown function DUF87 APE_0107 IPR018538 HerA-ATP synthase, barrel domain APE_0107 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0107 IPR033186 APE_0107 APE_0109.1 IPR018977 NurA domain APE_0110 IPR003395 RecF/RecN/SMC, N-terminal APE_0110 IPR013134 Zinc hook, Rad50 APE_0110 IPR022982 DNA double-strand break repair Rad50 ATPase, archaeal type APE_0110 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0110 IPR038729 APE_0110 APE_0113 IPR004843 Calcineurin-like phosphoesterase domain, apaH type APE_0113 IPR029052 Metallo-dependent phosphatase-like APE_0113 IPR032885 APE_0113 APE_0113a IPR001975 Ribosomal protein L40e APE_0113a IPR011332 Zinc-binding ribosomal protein APE_0113a IPR023657 Ribosomal protein L40e, archaeal APE_0113a IPR038587 APE_0113a APE_0115.1 IPR006084 APE_0115.1 APE_0115.1 IPR006085 XPG N-terminal APE_0115.1 IPR006086 XPG-I domain APE_0115.1 IPR008918 Helix-hairpin-helix motif, class 2 APE_0115.1 IPR019973 Flap structure-specific endonuclease, archaea APE_0115.1 IPR019974 XPG conserved site APE_0115.1 IPR023426 Flap structure-specific endonuclease APE_0115.1 IPR029060 PIN domain-like APE_0115.1 IPR036279 APE_0115.1 APE_0116.1 IPR007374 ASCH domain APE_0116.1 IPR015947 PUA-like domain APE_0117.1 IPR004154 Anticodon-binding APE_0117.1 IPR015011 Threonyl-tRNA synthetase, editing domain, archaea APE_0117.1 IPR023509 D-Tyr tRNAtyr deacylase-like domain APE_0117.1 IPR036621 APE_0117.1 APE_0119 IPR003593 AAA+ ATPase domain APE_0119 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical APE_0119 IPR011938 DNA recombination/repair protein RadA APE_0119 IPR013632 DNA recombination and repair protein Rad51, C-terminal APE_0119 IPR016467 DNA recombination and repair protein, RecA-like APE_0119 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0122.1 IPR001310 Histidine triad (HIT) protein APE_0122.1 IPR036265 APE_0122.1 APE_0124 IPR003156 DHHA1 domain APE_0124 IPR038763 APE_0124 APE_0125.1 IPR025403 Domain of unknown function DUF4129 APE_0127 IPR003593 AAA+ ATPase domain APE_0127 IPR011703 ATPase, AAA-3 APE_0127 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0129.1 IPR002881 Domain of unknown function DUF58 APE_0132.1 IPR007355 Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf26-related APE_0134.1 IPR012255 Electron transfer flavoprotein, beta subunit APE_0134.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0134.1 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal APE_0135 IPR001308 Electron transfer flavoprotein, alpha subunit APE_0135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0135 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal APE_0135 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal APE_0135 IPR029035 DHS-like NAD/FAD-binding domain APE_0136.1 IPR012443 Protein of unknown function DUF1646 APE_0137 IPR029055 Nucleophile aminohydrolases, N-terminal APE_0140.1 IPR006015 Universal stress protein A APE_0140.1 IPR006016 UspA APE_0140.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0141.1 IPR015947 PUA-like domain APE_0141.1 IPR019614 S-adenosylmethionine-dependent methyltransferase APE_0141.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0141.1 IPR036974 APE_0141.1 APE_0142 IPR001367 Iron dependent repressor-like, metal binding and dimerisation domain APE_0142 IPR022687 Iron dependent repressor, N-terminal APE_0142 IPR022689 Iron dependent repressor, diptheria toxin type APE_0142 IPR036388 APE_0142 APE_0142 IPR036390 APE_0142 APE_0142 IPR036421 APE_0142 APE_0143.1 IPR005024 Snf7 APE_0146.1 IPR000304 Pyrroline-5-carboxylate reductase APE_0146.1 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like APE_0146.1 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APE_0146.1 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain APE_0146.1 IPR036291 APE_0146.1 APE_0147.1 IPR012091 Peptidase M54, archaemetzincin, archaeal/bacterial APE_0147.1 IPR012962 Peptidase M54, archaemetzincin APE_0147.1 IPR024079 Metallopeptidase, catalytic domain APE_0148.1 IPR022952 Archease, archaea APE_0148.1 IPR023572 Archease domain APE_0148.1 IPR036820 APE_0148.1 APE_0150.1 IPR003265 HhH-GPD domain APE_0150.1 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif APE_0150.1 IPR004035 Endonuclease III, iron-sulphur binding site APE_0150.1 IPR011257 DNA glycosylase APE_0150.1 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APE_0152.1 IPR003593 AAA+ ATPase domain APE_0152.1 IPR014277 Orc1/Cdc6-type DNA replication protein, archaea APE_0152.1 IPR015163 CDC6, C-terminal domain APE_0152.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0152.1 IPR036388 APE_0152.1 APE_0152.1 IPR036390 APE_0152.1 APE_0152a IPR036388 APE_0152a APE_0152a IPR036390 APE_0152a APE_0153.1 IPR002831 Transcription regulator TrmB, N-terminal APE_0153.1 IPR036388 APE_0153.1 APE_0156.1 IPR006667 SLC41 divalent cation transporters, integral membrane domain APE_0156.1 IPR036739 APE_0156.1 APE_0157 IPR002698 5-formyltetrahydrofolate cyclo-ligase APE_0157 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APE_0157 IPR037171 APE_0157 APE_0158.1 IPR003171 Methylenetetrahydrofolate reductase APE_0158.1 IPR029041 FAD-linked oxidoreductase-like APE_0159 IPR000537 UbiA prenyltransferase family APE_0161.1 IPR002904 Lysine-tRNA ligase APE_0161.1 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding APE_0161.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0161.1 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 APE_0161.1 IPR023386 Lysine-tRNA ligase, insertion domain APE_0162 IPR000730 Proliferating cell nuclear antigen, PCNA APE_0162 IPR022648 Proliferating cell nuclear antigen, PCNA, N-terminal APE_0162 IPR022649 Proliferating cell nuclear antigen, PCNA, C-terminal APE_0162 IPR022659 Proliferating cell nuclear antigen, PCNA, conserved site APE_0163.1 IPR015590 Aldehyde dehydrogenase domain APE_0163.1 IPR016161 Aldehyde/histidinol dehydrogenase APE_0163.1 IPR016162 Aldehyde dehydrogenase, N-terminal APE_0163.1 IPR016163 Aldehyde dehydrogenase, C-terminal APE_0166.1 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like APE_0166.1 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type APE_0166.1 IPR036451 APE_0166.1 APE_0168.1 IPR001387 Cro/C1-type helix-turn-helix domain APE_0169.1 IPR004839 Aminotransferase, class I/classII APE_0169.1 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_0169.1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_0169.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_0171.1 IPR000846 Dihydrodipicolinate reductase, N-terminal APE_0171.1 IPR006436 Glyceraldehyde-3-phosphate dehydrogenase, type II APE_0171.1 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain APE_0171.1 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain APE_0171.1 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site APE_0171.1 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family APE_0171.1 IPR036291 APE_0171.1 APE_0173.1 IPR001576 Phosphoglycerate kinase APE_0173.1 IPR015824 Phosphoglycerate kinase, N-terminal APE_0173.1 IPR015911 Phosphoglycerate kinase, conserved site APE_0173.1 IPR036043 APE_0173.1 APE_0176.1 IPR036866 APE_0176.1 APE_0177 IPR001453 Molybdopterin binding domain APE_0177 IPR005110 MoeA, N-terminal and linker domain APE_0177 IPR036135 APE_0177 APE_0177 IPR036425 APE_0177 APE_0177 IPR036688 APE_0177 APE_0178.1 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain APE_0178.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0179 IPR025877 MobA-like NTP transferase domain APE_0179 IPR029044 Nucleotide-diphospho-sugar transferases APE_0179a IPR002675 Ribosomal protein L38e APE_0179a IPR038464 APE_0179a APE_0181 IPR001279 Beta-lactamase-like APE_0181 IPR011108 RNA-metabolising metallo-beta-lactamase APE_0181 IPR022712 Beta-Casp domain APE_0181 IPR036866 APE_0181 APE_0182.1 IPR003746 Protein of unknown function DUF167 APE_0182.1 IPR036591 APE_0182.1 APE_0183.1 IPR002781 Transmembrane protein TauE like APE_0184.1 IPR011701 Major facilitator superfamily APE_0184.1 IPR036259 APE_0184.1 APE_0187 IPR021151 GINS complex APE_0188.1 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase APE_0188.1 IPR003593 AAA+ ATPase domain APE_0188.1 IPR012340 Nucleic acid-binding, OB-fold APE_0188.1 IPR018525 Mini-chromosome maintenance, conserved site APE_0188.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0188.1 IPR027925 MCM N-terminal domain APE_0188.1 IPR031327 APE_0188.1 APE_0188.1 IPR033762 APE_0188.1 APE_0188.1 IPR036388 APE_0188.1 APE_0191.1 IPR001650 Helicase, C-terminal APE_0191.1 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 APE_0191.1 IPR003593 AAA+ ATPase domain APE_0191.1 IPR011545 DEAD/DEAH box helicase domain APE_0191.1 IPR014001 Helicase, superfamily 1/2, ATP-binding domain APE_0191.1 IPR022965 Putative ski2-type helicase APE_0191.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0191.1 IPR036390 APE_0191.1 APE_0193.1 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal APE_0193.1 IPR032095 APE_0193.1 APE_0193.1 IPR036291 APE_0193.1 APE_0197.1 IPR001387 Cro/C1-type helix-turn-helix domain APE_0197.1 IPR010982 Lambda repressor-like, DNA-binding domain APE_0197.1 IPR017271 Transcription regulator HTH, MJ1545, predicted APE_0198.1 IPR002715 Nascent polypeptide-associated complex NAC domain APE_0198.1 IPR005231 Nascent polypeptide-associated complex (NAC), archaeal APE_0198.1 IPR009060 UBA-like APE_0199.1 IPR038731 APE_0199.1 APE_0201.1 IPR036188 APE_0201.1 APE_0204.1 IPR002745 Phosphotransferase KptA/Tpt1 APE_0204.1 IPR022928 RNA 2'-phosphotransferase KptA, putative APE_0207 IPR009563 Sjoegren syndrome/scleroderma autoantigen 1 APE_0207 IPR022954 Uncharacterised protein family UPF0148 APE_0209.1 IPR001193 Membrane-bound transcription factor site-2 protease APE_0209.1 IPR001478 PDZ domain APE_0209.1 IPR008915 Peptidase M50 APE_0209.1 IPR036034 APE_0209.1 APE_0211.1 IPR029056 Ribokinase-like APE_0212.1 IPR007863 Peptidase M16, C-terminal domain APE_0212.1 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like APE_0212.1 IPR011765 Peptidase M16, N-terminal APE_0213.1 IPR002934 Nucleotidyl transferase domain APE_0213.1 IPR009185 Predicted nucleotidyltransferase APE_0216.1 IPR013216 Methyltransferase type 11 APE_0216.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0218 IPR002171 Ribosomal protein L2 APE_0218 IPR008991 Translation protein SH3-like domain APE_0218 IPR012340 Nucleic acid-binding, OB-fold APE_0218 IPR014722 Ribosomal protein L2 domain 2 APE_0218 IPR014726 Ribosomal protein L2, domain 3 APE_0218 IPR022666 Ribosomal Proteins L2, RNA binding domain APE_0218 IPR022669 Ribosomal protein L2, C-terminal APE_0218 IPR022671 Ribosomal protein L2, conserved site APE_0218 IPR023672 Ribosomal protein L2, archaeal-type APE_0219 IPR002789 Domain of unknown function DUF87 APE_0219 IPR003593 AAA+ ATPase domain APE_0219 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0222.1 IPR012695 Methylisocitrate lyase APE_0222.1 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain APE_0222.1 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site APE_0226.1 IPR003750 Putative RNA methyltransferase APE_0226.1 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APE_0226.1 IPR029028 Alpha/beta knot methyltransferases APE_0227 IPR000597 Ribosomal protein L3 APE_0227 IPR009000 Translation protein, beta-barrel domain APE_0227 IPR019926 Ribosomal protein L3, conserved site APE_0227 IPR019928 Ribosomal protein L3, archaeal APE_0228.1 IPR002136 Ribosomal protein L4/L1e APE_0228.1 IPR013000 Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site APE_0228.1 IPR019970 Ribosomal protein L4 APE_0228.1 IPR023574 Ribosomal protein L4 domain APE_0228a.1 IPR001014 Ribosomal protein L23/L25, conserved site APE_0228a.1 IPR012677 Nucleotide-binding, alpha-beta plait APE_0228a.1 IPR012678 Ribosomal protein L23/L15e core domain APE_0228a.1 IPR013025 Ribosomal protein L25/L23 APE_0228a.1 IPR019985 Ribosomal protein L23 APE_0230.1 IPR000808 Mrp, conserved site APE_0230.1 IPR019591 Mrp/NBP35 ATP-binding protein APE_0230.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0230.1 IPR033756 APE_0230.1 APE_0231 IPR000644 CBS domain APE_0233 IPR000644 CBS domain APE_0234 IPR000644 CBS domain APE_0235.1 IPR006283 Thiamine-monophosphate kinase APE_0235.1 IPR016188 PurM, N-terminal-like APE_0235.1 IPR036676 APE_0235.1 APE_0235.1 IPR036921 APE_0235.1 APE_0236.1 IPR000878 Tetrapyrrole methylase APE_0236.1 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site APE_0236.1 IPR006366 Uroporphyrin-III C-methyltransferase APE_0236.1 IPR014776 Tetrapyrrole methylase, subdomain 2 APE_0236.1 IPR014777 Tetrapyrrole methylase, subdomain 1 APE_0236.1 IPR035996 APE_0236.1 APE_0237.1 IPR010644 Chlorite dismutase APE_0237.1 IPR011008 Dimeric alpha-beta barrel APE_0243 IPR036249 APE_0243 APE_0244.1 IPR002161 PdxT/SNO family APE_0244.1 IPR021196 PdxT/SNO family, conserved site APE_0244.1 IPR029062 Class I glutamine amidotransferase-like APE_0246.1 IPR001852 Pyridoxine biosynthesis protein APE_0246.1 IPR011060 Ribulose-phosphate binding barrel APE_0246.1 IPR013785 Aldolase-type TIM barrel APE_0246.1 IPR033755 APE_0246.1 APE_0248.1 IPR003773 Menaquinone biosynthesis enzyme APE_0248.1 IPR030869 APE_0248.1 APE_0249.1 IPR006638 Elongator protein 3/MiaB/NifB APE_0249.1 IPR007197 Radical SAM APE_0249.1 IPR013785 Aldolase-type TIM barrel APE_0249.1 IPR020050 FO synthase, subunit 2 APE_0252 IPR006638 Elongator protein 3/MiaB/NifB APE_0252 IPR007197 Radical SAM APE_0252 IPR013785 Aldolase-type TIM barrel APE_0252 IPR020050 FO synthase, subunit 2 APE_0254 IPR003773 Menaquinone biosynthesis enzyme APE_0255.1 IPR005835 Nucleotidyl transferase APE_0255.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_0256 IPR007164 Protein of unknown function DUF359 APE_0256a.1 IPR007178 Archaeal transcription elongation factor Spt4 APE_0256a.1 IPR022800 Spt4/RpoE2 zinc finger APE_0256a.1 IPR029040 RNA polymerase subunit RPABC4/transcription elongation factor Spt4 APE_0256a.1 IPR038589 APE_0256a.1 APE_0257 IPR003029 Ribosomal protein S1, RNA-binding domain APE_0257 IPR005576 RNA polymerase Rpb7, N-terminal APE_0257 IPR012340 Nucleic acid-binding, OB-fold APE_0257 IPR022967 RNA-binding domain, S1 APE_0257 IPR036898 APE_0257 APE_0257a IPR009051 Alpha-helical ferredoxin APE_0257a IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_0257a IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_0258.1 IPR003741 Domain of unknown function DUF162 APE_0258.1 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APE_0258.1 IPR037171 APE_0258.1 APE_0260.1 IPR005720 Dihydroorotate dehydrogenase domain APE_0260.1 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 APE_0260.1 IPR013785 Aldolase-type TIM barrel APE_0260.1 IPR024920 Dihydroorotate dehydrogenase, class 1 APE_0261.1 IPR002195 Dihydroorotase, conserved site APE_0261.1 IPR004722 Dihydroorotase APE_0261.1 IPR006680 Amidohydrolase 1 APE_0261.1 IPR032466 APE_0261.1 APE_0262 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain APE_0262 IPR030395 APE_0262 APE_0263.1 IPR000209 Peptidase S8/S53 domain APE_0263.1 IPR015500 Peptidase S8, subtilisin-related APE_0263.1 IPR022398 Peptidase S8, subtilisin, His-active site APE_0263.1 IPR023827 Peptidase S8, subtilisin, Asp-active site APE_0263.1 IPR023828 Peptidase S8, subtilisin, Ser-active site APE_0263.1 IPR036852 APE_0263.1 APE_0263.1 IPR037045 APE_0263.1 APE_0264.1 IPR025285 Domain of unknown function DUF4145 APE_0266.1 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal APE_0266.1 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal APE_0266.1 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 APE_0266.1 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 APE_0266.1 IPR036021 APE_0266.1 APE_0266.1 IPR036503 APE_0266.1 APE_0266a.1 IPR002849 Protein of unknown function DUF131 APE_0267 IPR000644 CBS domain APE_0270.1 IPR000515 MetI-like domain APE_0270.1 IPR035906 APE_0270.1 APE_0272.1 IPR005950 Molybdenum ABC transporter, periplasmic binding protein APE_0273 IPR002716 PIN domain APE_0273 IPR029060 PIN domain-like APE_0273a IPR008203 Uncharacterised protein family UPF0165 APE_0273a IPR024069 AF2212-like domain APE_0274a IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0275.1 IPR003265 HhH-GPD domain APE_0275.1 IPR011257 DNA glycosylase APE_0275a IPR019270 Protein of unknown function DUF2283 APE_0275b.1 IPR000845 Nucleoside phosphorylase domain APE_0275b.1 IPR035994 APE_0275b.1 APE_0276.1 IPR021799 Protein of unknown function DUF3368 APE_0276.1 IPR029060 PIN domain-like APE_0276a IPR005368 Uncharacterised protein family UPF0175 APE_0278 IPR002716 PIN domain APE_0278 IPR029060 PIN domain-like APE_0279.1 IPR002716 PIN domain APE_0279.1 IPR029060 PIN domain-like APE_0279a.1 IPR008203 Uncharacterised protein family UPF0165 APE_0279a.1 IPR024069 AF2212-like domain APE_0283a IPR008203 Uncharacterised protein family UPF0165 APE_0283a IPR024069 AF2212-like domain APE_0287 IPR009050 Globin-like APE_0287 IPR012102 Protoglobin APE_0287 IPR012292 Globin, structural domain APE_0288 IPR000835 MarR-type HTH domain APE_0288 IPR023187 Transcriptional regulator MarR-type, conserved site APE_0288 IPR036388 APE_0288 APE_0288 IPR036390 APE_0288 APE_0290.1 IPR001845 HTH ArsR-type DNA-binding domain APE_0290.1 IPR036388 APE_0290.1 APE_0290.1 IPR036390 APE_0290.1 APE_0290a IPR036249 APE_0290a APE_0291 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APE_0291 IPR036249 APE_0291 APE_0293 IPR001845 HTH ArsR-type DNA-binding domain APE_0293 IPR036388 APE_0293 APE_0293 IPR036390 APE_0293 APE_0294.1 IPR008972 Cupredoxin APE_0294.1 IPR028096 EfeO-type cupredoxin-like domain APE_0297 IPR036390 APE_0297 APE_0300.1 IPR003439 ABC transporter-like APE_0300.1 IPR003593 AAA+ ATPase domain APE_0300.1 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_0300.1 IPR017871 ABC transporter, conserved site APE_0300.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0301.1 IPR003439 ABC transporter-like APE_0301.1 IPR003593 AAA+ ATPase domain APE_0301.1 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_0301.1 IPR017871 ABC transporter, conserved site APE_0301.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0302.1 IPR000515 MetI-like domain APE_0302.1 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APE_0302.1 IPR035906 APE_0302.1 APE_0303 IPR000515 MetI-like domain APE_0303 IPR035906 APE_0303 APE_0304.1 IPR000601 PKD domain APE_0304.1 IPR000914 Bacterial extracellular solute-binding protein, family 5 APE_0304.1 IPR013783 Immunoglobulin-like fold APE_0304.1 IPR022409 PKD/Chitinase domain APE_0304.1 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site APE_0304.1 IPR035986 APE_0304.1 APE_0306.1 IPR000577 APE_0306.1 APE_0306.1 IPR018484 Carbohydrate kinase, FGGY, N-terminal APE_0306.1 IPR018485 Carbohydrate kinase, FGGY, C-terminal APE_0308.1 IPR004113 FAD-linked oxidase, C-terminal APE_0308.1 IPR006094 FAD linked oxidase, N-terminal APE_0308.1 IPR016164 FAD-linked oxidase-like, C-terminal APE_0308.1 IPR036318 APE_0308.1 APE_0309.1 IPR006076 FAD dependent oxidoreductase APE_0309.1 IPR036188 APE_0309.1 APE_0311 IPR005000 HpcH/HpaI aldolase/citrate lyase domain APE_0311 IPR011206 Citrate lyase beta subunit-like APE_0311 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain APE_0313.1 IPR023370 TsaA-like domain APE_0313.1 IPR036413 APE_0313.1 APE_0313.1 IPR036414 APE_0313.1 APE_0314.1 IPR007035 Peptidase M55, D-aminopeptidase APE_0314.1 IPR027476 D-aminopeptidase, N-terminal APE_0314.1 IPR036177 APE_0314.1 APE_0316.1 IPR006035 Ureohydrolase APE_0316.1 IPR020855 Ureohydrolase, manganese-binding site APE_0316.1 IPR023696 Ureohydrolase domain APE_0317.1 IPR005841 Alpha-D-phosphohexomutase superfamily APE_0317.1 IPR005843 Alpha-D-phosphohexomutase, C-terminal APE_0317.1 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I APE_0317.1 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II APE_0317.1 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III APE_0317.1 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III APE_0317.1 IPR016066 Alpha-D-phosphohexomutase, conserved site APE_0317.1 IPR024086 Phosphoglucosamine mutase, archaeal-related APE_0317.1 IPR036900 APE_0317.1 APE_0319 IPR002818 ThiJ/PfpI APE_0319 IPR006286 Peptidase C56, PfpI APE_0319 IPR029062 Class I glutamine amidotransferase-like APE_0320.1 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_0320.1 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_0322.1 IPR006554 Helicase-like, DEXD box c2 type APE_0322.1 IPR006555 ATP-dependent helicase, C-terminal APE_0322.1 IPR010614 DEAD2 APE_0322.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0326.1 IPR003593 AAA+ ATPase domain APE_0326.1 IPR010339 TIP49, C-terminal APE_0326.1 IPR012340 Nucleic acid-binding, OB-fold APE_0326.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0330.1 IPR001279 Beta-lactamase-like APE_0330.1 IPR036866 APE_0330.1 APE_0333.1 IPR011962 Deoxycytidine triphosphate deaminase APE_0333.1 IPR029054 dUTPase-like APE_0333.1 IPR036157 APE_0333.1 APE_0336.1 IPR002692 Penicillin amidase-like APE_0336.1 IPR014395 Penicillin/cephalosporin acylase APE_0336.1 IPR023343 Penicillin amidase type, domain1 APE_0336.1 IPR029055 Nucleophile aminohydrolases, N-terminal APE_0337.1 IPR008257 Renal dipeptidase family APE_0337.1 IPR032466 APE_0337.1 APE_0338.1 IPR001466 Beta-lactamase-related APE_0338.1 IPR012338 Beta-lactamase/transpeptidase-like APE_0339.1 IPR007184 Mannoside phosphorylase APE_0339.1 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APE_0340.1 IPR028212 Hypothetical glycosyl hydrolase 6 APE_0340.1 IPR029062 Class I glutamine amidotransferase-like APE_0342.1 IPR006683 Thioesterase superfamily APE_0342.1 IPR029069 HotDog domain APE_0343 IPR001196 Ribosomal protein L15, conserved site APE_0343 IPR021131 Ribosomal protein L18e/L15P APE_0343 IPR027386 50S ribosomal protein L15P, N-terminal APE_0343 IPR030878 APE_0343 APE_0343 IPR036227 APE_0343 APE_0345.1 IPR005997 Ribosomal protein L30, archaeal APE_0345.1 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APE_0345.1 IPR023106 Ribosomal protein L30, central domain, archaeal type APE_0345.1 IPR036919 APE_0345.1 APE_0346 IPR005324 Ribosomal protein S5, C-terminal APE_0346 IPR005711 Ribosomal protein S5, eukaryotic/archaeal APE_0346 IPR013810 Ribosomal protein S5, N-terminal APE_0346 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_0346 IPR018192 Ribosomal protein S5, N-terminal, conserved site APE_0346 IPR020568 Ribosomal protein S5 domain 2-type fold APE_0347 IPR005485 Ribosomal protein L5 eukaryotic/L18 archaeal APE_0347 IPR025607 Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal APE_0348 IPR000196 Ribosomal protein L19/L19e domain APE_0348 IPR015972 Ribosomal protein L19/L19e, domain 1 APE_0348 IPR023638 Ribosomal protein L19/L19e conserved site APE_0348 IPR035970 APE_0348 APE_0349 IPR001515 Ribosomal protein L32e APE_0349 IPR018263 Ribosomal protein L32e, conserved site APE_0349 IPR023654 Ribosomal protein L32e, archaeal APE_0349 IPR036351 APE_0349 APE_0350 IPR000702 Ribosomal protein L6 APE_0350 IPR002359 Ribosomal protein L6, conserved site-2 APE_0350 IPR019907 Ribosomal protein L6P, archaea APE_0350 IPR020040 Ribosomal protein L6, alpha-beta domain APE_0350 IPR036789 APE_0350 APE_0352.1 IPR000630 Ribosomal protein S8 APE_0352.1 IPR035987 APE_0352.1 APE_0352a IPR001209 Ribosomal protein S14 APE_0352a IPR018271 Ribosomal protein S14, conserved site APE_0352a IPR023676 Ribosomal protein S14, type Z, archaeal APE_0354.1 IPR002132 Ribosomal protein L5 APE_0354.1 IPR022803 Ribosomal protein L5 domain APE_0354.1 IPR022804 Ribosomal protein L5, archaeal APE_0354.1 IPR031309 APE_0354.1 APE_0354.1 IPR031310 APE_0354.1 APE_0356.1 IPR000876 Ribosomal protein S4e APE_0356.1 IPR002942 RNA-binding S4 domain APE_0356.1 IPR013843 Ribosomal protein S4e, N-terminal APE_0356.1 IPR013845 Ribosomal protein S4e, central region APE_0356.1 IPR014722 Ribosomal protein L2 domain 2 APE_0356.1 IPR038237 APE_0356.1 APE_0358 IPR005756 Ribosomal protein L26/L24P, eukaryotic/archaeal APE_0358 IPR005824 KOW APE_0358 IPR005825 Ribosomal protein L24/L26, conserved site APE_0358 IPR008991 Translation protein SH3-like domain APE_0358 IPR014722 Ribosomal protein L2 domain 2 APE_0359 IPR000218 Ribosomal protein L14b/L23e APE_0359 IPR019971 Ribosomal protein L14P, archaeal APE_0359 IPR019972 Ribosomal protein L14 conserved site APE_0359 IPR036853 APE_0359 APE_0360.1 IPR000266 Ribosomal protein S17 APE_0360.1 IPR012340 Nucleic acid-binding, OB-fold APE_0360.1 IPR019978 Ribosomal protein S17, archaeal APE_0360.1 IPR028333 Ribosomal protein S17, archaeal/eukaryotic APE_0362 IPR002730 Ribonuclease P/MRP, subunit p29 APE_0362 IPR023534 Rof/RNase P-like APE_0362 IPR023538 Ribonuclease P, protein component 1 APE_0362 IPR036980 APE_0362 APE_0362a IPR001854 Ribosomal protein L29 APE_0362a IPR018254 Ribosomal protein L29, conserved site APE_0362a IPR036049 APE_0362a APE_0363 IPR001351 Ribosomal protein S3, C-terminal APE_0363 IPR004044 K Homology domain, type 2 APE_0363 IPR004087 K Homology domain APE_0363 IPR005703 Ribosomal protein S3, eukaryotic/archaeal APE_0363 IPR009019 K homology domain, prokaryotic type APE_0363 IPR015946 K homology domain-like, alpha/beta APE_0363 IPR018280 Ribosomal protein S3, conserved site APE_0363 IPR027488 Ribosomal protein S3, archaeal APE_0363 IPR036419 APE_0363 APE_0365 IPR001063 Ribosomal protein L22/L17 APE_0365 IPR005721 Ribosomal protein L22/L17, eukaryotic/archaeal APE_0365 IPR018260 Ribosomal protein L22/L17, conserved site APE_0365 IPR036394 APE_0365 APE_0367.1 IPR002222 Ribosomal protein S19/S15 APE_0367.1 IPR005713 Ribosomal protein S19A/S15e APE_0367.1 IPR020934 Ribosomal protein S19 conserved site APE_0367.1 IPR023575 Ribosomal protein S19, superfamily APE_0370 IPR008912 Uncharacterised protein family CoxE-like APE_0370 IPR036465 APE_0370 APE_0372.1 IPR001270 ClpA/B family APE_0372.1 IPR003593 AAA+ ATPase domain APE_0372.1 IPR011704 ATPase, dynein-related, AAA domain APE_0372.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0373 IPR011604 Exonuclease, phage-type/RecB, C-terminal APE_0373 IPR013343 CRISPR-associated protein Cas4 APE_0373 IPR038726 APE_0373 APE_0374 IPR002300 Aminoacyl-tRNA synthetase, class Ia APE_0374 IPR002301 Isoleucine-tRNA ligase APE_0374 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain APE_0374 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding APE_0374 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APE_0374 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0374 IPR023586 Isoleucine-tRNA ligase, type 2 APE_0381.1 IPR002912 ACT domain APE_0381.1 IPR007159 AbrB-like domain APE_0381.1 IPR020603 MraZ domain APE_0381.1 IPR037914 APE_0381.1 APE_0382 IPR001279 Beta-lactamase-like APE_0382 IPR036866 APE_0382 APE_0383.1 IPR000644 CBS domain APE_0385.1 IPR006089 Acyl-CoA dehydrogenase, conserved site APE_0385.1 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APE_0385.1 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_0385.1 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain APE_0385.1 IPR036250 APE_0385.1 APE_0389 IPR000182 GNAT domain APE_0389 IPR016181 Acyl-CoA N-acyltransferase APE_0390 IPR000182 GNAT domain APE_0390 IPR016181 Acyl-CoA N-acyltransferase APE_0392 IPR001891 Malic oxidoreductase APE_0392 IPR012301 Malic enzyme, N-terminal domain APE_0392 IPR012302 Malic enzyme, NAD-binding APE_0392 IPR036291 APE_0392 APE_0392 IPR037062 APE_0392 APE_0396.1 IPR000873 AMP-dependent synthetase/ligase APE_0396.1 IPR020845 AMP-binding, conserved site APE_0396.1 IPR025110 AMP-binding enzyme C-terminal domain APE_0401.1 IPR001048 Aspartate/glutamate/uridylate kinase APE_0401.1 IPR011817 Uridylate kinase APE_0401.1 IPR011818 Uridylate kinase, archaeal/spirochete, putative APE_0401.1 IPR036393 APE_0401.1 APE_0402.1 IPR002699 ATPase, V1 complex, subunit D APE_0404.1 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain APE_0404.1 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain APE_0404.1 IPR005724 ATPase, A1 complex, beta subunit APE_0404.1 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site APE_0404.1 IPR022879 V-type ATP synthase regulatory subunit B/beta APE_0404.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0405.1 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain APE_0405.1 IPR003593 AAA+ ATPase domain APE_0405.1 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain APE_0405.1 IPR005726 ATP synthase alpha chain, archaea APE_0405.1 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site APE_0405.1 IPR022878 V-type ATP synthase catalytic alpha chain APE_0405.1 IPR023366 ATP synthase subunit alpha-like domain APE_0405.1 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal APE_0405.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0405.1 IPR031686 APE_0405.1 APE_0405.1 IPR036121 APE_0405.1 APE_0409.1 IPR002842 ATPase, V1/A1 complex, subunit E APE_0409.1 IPR038495 APE_0409.1 APE_0410.1 IPR008218 ATPase, V1 complex, subunit F APE_0410.1 IPR036906 APE_0410.1 APE_0412 IPR002129 Pyridoxal phosphate-dependent decarboxylase APE_0412 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_0412 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_0412 IPR015424 Pyridoxal phosphate-dependent transferase APE_0413 IPR001650 Helicase, C-terminal APE_0413 IPR006935 Helicase/UvrB domain APE_0413 IPR011051 RmlC-like cupin domain APE_0413 IPR014001 Helicase, superfamily 1/2, ATP-binding domain APE_0413 IPR024975 Domain of unknown function DUF3883 APE_0413 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0413 IPR038718 APE_0413 APE_0415 IPR007555 Protein of unknown function DUF499 APE_0416.1 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APE_0416.1 IPR009537 Domain of unknown function DUF1156 APE_0416.1 IPR014455 DNA methylase, N-6 adenine-specific, MK1259 type APE_0416.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0416b.1 IPR002145 Ribbon-helix-helix protein, copG APE_0416b.1 IPR010985 Ribbon-helix-helix APE_0416b.1 IPR013321 Arc-type ribbon-helix-helix APE_0421 IPR002761 DUF71 domain APE_0421 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0421 IPR022427 Conserved hypothetical protein CHP03679, ATP-binding APE_0421 IPR030662 APE_0421 APE_0423.1 IPR001130 TatD family APE_0423.1 IPR015991 Uncharacterised deoxyribonuclease TatD-type APE_0423.1 IPR032466 APE_0423.1 APE_0426.1 IPR001173 Glycosyltransferase 2-like APE_0426.1 IPR007267 GtrA-like protein APE_0426.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_0427.1 IPR005122 Uracil-DNA glycosylase-like APE_0427.1 IPR005273 Uracil-DNA glycosylase, family 4 domain APE_0427.1 IPR036895 APE_0427.1 APE_0428.1 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_0428.1 IPR020568 Ribosomal protein S5 domain 2-type fold APE_0431 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0433 IPR002726 Uncharacterised protein family UPF0290 APE_0433 IPR032690 APE_0433 APE_0433a IPR007264 H/ACA ribonucleoprotein complex, subunit Nop10 APE_0433a IPR023532 H/ACA ribonucleoprotein complex subunit Nop10 , archaeal-type APE_0433a IPR036756 APE_0433a APE_0436.1 IPR003029 Ribosomal protein S1, RNA-binding domain APE_0436.1 IPR011488 Translation initiation factor 2, alpha subunit APE_0436.1 IPR012340 Nucleic acid-binding, OB-fold APE_0436.1 IPR022964 Translation initiation factor 2, alpha subunit, archaeal APE_0436.1 IPR022967 RNA-binding domain, S1 APE_0436.1 IPR024054 Translation initiation factor 2, alpha subunit, middle domain APE_0436.1 IPR024055 Translation initiation factor 2, alpha subunit, C-terminal APE_0436a IPR000592 Ribosomal protein S27e APE_0436a IPR011332 Zinc-binding ribosomal protein APE_0436a IPR023407 Ribosomal protein S27e, zinc-binding domain APE_0436b.1 IPR000552 Ribosomal protein L44e APE_0436b.1 IPR011332 Zinc-binding ribosomal protein APE_0438.1 IPR002755 DNA primase, small subunit APE_0438.1 IPR023639 DNA primase, small subunit, archaeal APE_0441.1 IPR000730 Proliferating cell nuclear antigen, PCNA APE_0441.1 IPR022648 Proliferating cell nuclear antigen, PCNA, N-terminal APE_0441.1 IPR022649 Proliferating cell nuclear antigen, PCNA, C-terminal APE_0442.1 IPR001222 Zinc finger, TFIIS-type APE_0442.1 IPR001529 DNA-directed RNA polymerase, M/15kDa subunit APE_0442.1 IPR006288 Transcription factor S/DNA-directed RNA polymerase subunit M APE_0442.1 IPR012164 DNA-directed RNA polymerase, subunit C11/M/9 APE_0443.1 IPR008193 DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site APE_0443.1 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain APE_0443.1 IPR022905 DNA-directed RNA polymerase subunit L (Rpo11) APE_0443.1 IPR036603 APE_0443.1 APE_0444.1 IPR019202 Protein of unknown function DUF2067 APE_0445 IPR012340 Nucleic acid-binding, OB-fold APE_0445 IPR025721 Exosome complex component, N-terminal domain APE_0445 IPR030850 APE_0445 APE_0446 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APE_0446 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0447.1 IPR016435 Diphthamide synthesis, eukaryotic DPH1/archaeal DPH2 APE_0447.1 IPR022428 Diphthamide synthesis DPH2, archaea APE_0447.1 IPR035435 APE_0447.1 APE_0449 IPR001197 Ribosomal protein L10e APE_0449 IPR016180 Ribosomal protein L10e/L16 APE_0449 IPR018255 Ribosomal protein L10e, conserved site APE_0449 IPR022981 Ribosomal protein L10e, archaea APE_0449 IPR036920 APE_0449 APE_0450 IPR001453 Molybdopterin binding domain APE_0450 IPR005110 MoeA, N-terminal and linker domain APE_0450 IPR005111 MoeA, C-terminal, domain IV APE_0450 IPR036135 APE_0450 APE_0450 IPR036425 APE_0450 APE_0450 IPR036688 APE_0450 APE_0450a IPR020906 Double-stranded DNA-binding Cren7 APE_0450a IPR038647 APE_0450a APE_0454 IPR005224 Sugar fermentation stimulation protein APE_0457 IPR005814 Aminotransferase class-III APE_0457 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_0457 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_0457 IPR015424 Pyridoxal phosphate-dependent transferase APE_0459 IPR012318 Helix-turn-helix motif, Crp-type APE_0459 IPR036388 APE_0459 APE_0459 IPR036390 APE_0459 APE_0461 IPR002732 Resolvase, Holliday junction-type APE_0461 IPR011335 Restriction endonuclease type II-like APE_0461 IPR011856 tRNA endonuclease-like domain APE_0461 IPR014428 Resolvase, Holliday junction-type, archaeal APE_0462 IPR001482 Type II secretion system protein E APE_0462 IPR002716 PIN domain APE_0462 IPR003593 AAA+ ATPase domain APE_0462 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0464.1 IPR011059 Metal-dependent hydrolase, composite domain APE_0465.1 IPR003720 tRNA sulfurtransferase ThiI APE_0465.1 IPR004114 THUMP APE_0465.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0465.1 IPR020536 Thil, AANH domain APE_0469.1 IPR022285 Conserved hypothetical protein CHP03879, regulatory domain, putative APE_0470.1 IPR032688 APE_0470.1 APE_0471.1 IPR003439 ABC transporter-like APE_0471.1 IPR003593 AAA+ ATPase domain APE_0471.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0471a IPR002716 PIN domain APE_0471a IPR029060 PIN domain-like APE_0472 IPR002716 PIN domain APE_0472 IPR029060 PIN domain-like APE_0472b.1 IPR008203 Uncharacterised protein family UPF0165 APE_0473.1 IPR007159 AbrB-like domain APE_0473.1 IPR037914 APE_0473.1 APE_0475.1 IPR003593 AAA+ ATPase domain APE_0475.1 IPR014277 Orc1/Cdc6-type DNA replication protein, archaea APE_0475.1 IPR015163 CDC6, C-terminal domain APE_0475.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0475.1 IPR036388 APE_0475.1 APE_0475.1 IPR036390 APE_0475.1 APE_0476.1 IPR002802 Protein of unknown function DUF99 APE_0478.1 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site APE_0478.1 IPR006638 Elongator protein 3/MiaB/NifB APE_0478.1 IPR007197 Radical SAM APE_0478.1 IPR010505 Molybdenum cofactor synthesis C-terminal APE_0478.1 IPR013485 Molybdenum cofactor biosynthesis protein A, archaea APE_0478.1 IPR013785 Aldolase-type TIM barrel APE_0481.1 IPR009051 Alpha-helical ferredoxin APE_0481.1 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_0481.1 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_0487 IPR004113 FAD-linked oxidase, C-terminal APE_0487 IPR006094 FAD linked oxidase, N-terminal APE_0487 IPR016164 FAD-linked oxidase-like, C-terminal APE_0487 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APE_0487 IPR036318 APE_0487 APE_0488.1 IPR018700 Protein of unknown function DUF2204 APE_0489 IPR001697 Pyruvate kinase APE_0489 IPR011037 Pyruvate kinase-like, insert domain APE_0489 IPR015793 Pyruvate kinase, barrel APE_0489 IPR015806 Pyruvate kinase, beta-barrel insert domain APE_0489 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain APE_0489 IPR036918 APE_0489 APE_0490.1 IPR000836 Phosphoribosyltransferase domain APE_0490.1 IPR029057 Phosphoribosyltransferase-like APE_0492.1 IPR000415 Nitroreductase-like APE_0492.1 IPR020051 SagB-type dehydrogenase domain APE_0492.1 IPR029479 Nitroreductase APE_0493.1 IPR000649 Initiation factor 2B-related APE_0493.1 IPR037171 APE_0493.1 APE_0496.1 IPR004649 Ribonuclease H2, subunit A APE_0496.1 IPR012337 Ribonuclease H-like domain APE_0496.1 IPR020787 Ribonuclease HII, archaea APE_0496.1 IPR024567 Ribonuclease HII/HIII domain APE_0496.1 IPR036397 APE_0496.1 APE_0498 IPR007364 SAM-dependent RNA methyltransferase, predicted APE_0498 IPR016742 tRNA (guanine-N(1)-)-methyltransferase, archaea, predicted APE_0498 IPR038459 APE_0498 APE_0500.1 IPR014426 Uncharacterised protein family UPF0282, hydrolase, metallo-beta-lactamase APE_0500.1 IPR036866 APE_0500.1 APE_0502 IPR005304 Ribosomal biogenesis, methyltransferase, EMG1/NEP1 APE_0502 IPR023503 Ribosome biogenesis methyltransferase NEP1, archaea APE_0502 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APE_0502 IPR029028 Alpha/beta knot methyltransferases APE_0503.1 IPR014450 Uncharacterised conserved protein UCP008210 APE_0505 IPR005651 Uncharacterised protein family UPF0434/Trm112 APE_0506 IPR007581 Endonuclease V APE_0507.1 IPR000243 Peptidase T1A, proteasome beta-subunit APE_0507.1 IPR001353 Proteasome, subunit alpha/beta APE_0507.1 IPR016050 Proteasome beta-type subunit, conserved site APE_0507.1 IPR019983 Peptidase T1A, proteasome beta-subunit, archaeal APE_0507.1 IPR029055 Nucleophile aminohydrolases, N-terminal APE_0508.1 IPR013137 Zinc finger, TFIIB-type APE_0510.1 IPR006073 GTP binding domain APE_0510.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0511.1 IPR000228 RNA 3'-terminal phosphate cyclase APE_0511.1 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain APE_0511.1 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta APE_0511.1 IPR017770 RNA 3'-terminal phosphate cyclase type 1 APE_0511.1 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site APE_0511.1 IPR023797 RNA 3'-terminal phosphate cyclase domain APE_0511.1 IPR036553 APE_0511.1 APE_0511.1 IPR037136 APE_0511.1 APE_0513.1 IPR004821 Cytidyltransferase-like domain APE_0513.1 IPR006418 Nicotinamide-nucleotide adenylyltransferase, archaeal type APE_0513.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0514 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p APE_0514 IPR023267 RNA (C5-cytosine) methyltransferase APE_0514 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0514 IPR031341 APE_0514 APE_0516.1 IPR005155 Ribosome biogenesis factor NIP7-like APE_0516.1 IPR036974 APE_0516.1 APE_0517 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain APE_0519.1 IPR016205 Glycerol dehydrogenase APE_0519.1 IPR023002 Glycerol-1-phosphate dehydrogenase, archaea APE_0519.1 IPR032837 APE_0519.1 APE_0521.1 IPR000243 Peptidase T1A, proteasome beta-subunit APE_0521.1 IPR001353 Proteasome, subunit alpha/beta APE_0521.1 IPR019983 Peptidase T1A, proteasome beta-subunit, archaeal APE_0521.1 IPR029055 Nucleophile aminohydrolases, N-terminal APE_0522.1 IPR001279 Beta-lactamase-like APE_0522.1 IPR011108 RNA-metabolising metallo-beta-lactamase APE_0522.1 IPR015946 K homology domain-like, alpha/beta APE_0522.1 IPR019975 KH-domain/beta-lactamase-domain protein, archaea APE_0522.1 IPR022712 Beta-Casp domain APE_0522.1 IPR033769 APE_0522.1 APE_0522.1 IPR036866 APE_0522.1 APE_0525.1 IPR002478 PUA domain APE_0525.1 IPR004521 Uncharacterised domain CHP00451 APE_0525.1 IPR015266 Domain of unknown function DUF1947 APE_0525.1 IPR015947 PUA-like domain APE_0525.1 IPR016437 Translation-associated RNA-binding, predicted APE_0525.1 IPR022430 Conserved hypothetical protein CHP03684 APE_0525.1 IPR036974 APE_0525.1 APE_0525a IPR001163 Ribonucleoprotein LSM domain APE_0525a IPR010920 Like-Sm (LSM) domain APE_0525a IPR022901 snRNP Sm-like, putative, archaea APE_0525b IPR001569 Ribosomal protein L37e APE_0525b IPR011331 Ribosomal protein L37ae/L37e APE_0525b IPR011332 Zinc-binding ribosomal protein APE_0525b IPR018267 Ribosomal protein L37e, conserved site APE_0526.1 IPR000587 Creatinase, N-terminal APE_0526.1 IPR000994 Peptidase M24, structural domain APE_0526.1 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APE_0526.1 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APE_0526.1 IPR036005 APE_0526.1 APE_0528 IPR004304 Acetamidase/Formamidase APE_0531.1 IPR006127 Periplasmic solute binding protein family APE_0532.1 IPR003439 ABC transporter-like APE_0532.1 IPR003593 AAA+ ATPase domain APE_0532.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0534.1 IPR001626 ABC-3 APE_0534.1 IPR037294 APE_0534.1 APE_0535 IPR010985 Ribbon-helix-helix APE_0535 IPR014864 Transcription factor, NikR, nickel binding C-terminal APE_0535 IPR038733 APE_0535 APE_0537.1 IPR000541 Cytoplasmic tRNA 2-thiolation protein 1 APE_0537.1 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase APE_0537.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0537.1 IPR035107 APE_0537.1 APE_0537a IPR001380 Ribosomal protein L13e APE_0537a IPR018256 Ribosomal protein L13e, conserved site APE_0540.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0540.1 IPR032319 APE_0540.1 APE_0543 IPR011701 Major facilitator superfamily APE_0543 IPR036259 APE_0543 APE_0545.1 IPR005765 Uracil phosphoribosyl transferase APE_0545.1 IPR029057 Phosphoribosyltransferase-like APE_0545.1 IPR034331 APE_0545.1 APE_0546.1 IPR004114 THUMP APE_0546.1 IPR005912 tRNA pseudouridine synthase, Pus10 APE_0546.1 IPR020103 Pseudouridine synthase, catalytic domain APE_0546a IPR001147 Ribosomal protein L21e APE_0546a IPR008991 Translation protein SH3-like domain APE_0546a IPR018259 Ribosomal protein L21e, conserved site APE_0546a IPR022856 Ribosomal protein L21e, archaeal APE_0546a IPR036948 APE_0546a APE_0549.1 IPR010924 DNA-directed RNA polymerase subunit F (Rpo4) APE_0549.1 IPR010997 HRDC-like APE_0550 IPR007003 Protein of unknown function DUF655 APE_0553 IPR001737 Ribosomal RNA adenine methylase transferase APE_0553 IPR011530 Ribosomal RNA adenine dimethylase APE_0553 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal APE_0553 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0554.1 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APE_0554.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0555.1 IPR001537 tRNA/rRNA methyltransferase, SpoU type APE_0555.1 IPR004384 RNA methyltransferase TrmH, group 1 APE_0555.1 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APE_0555.1 IPR029028 Alpha/beta knot methyltransferases APE_0557 IPR000241 Putative RNA methylase domain APE_0557 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APE_0557 IPR004114 THUMP APE_0557 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0558.1 IPR028081 Leucine-binding protein domain APE_0558.1 IPR028082 Periplasmic binding protein-like I APE_0560 IPR016675 Uncharacterised conserved protein UCP016666 APE_0562.1 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APE_0562.1 IPR036291 APE_0562.1 APE_0562a IPR002701 Chorismate mutase APE_0562a IPR036263 APE_0562a APE_0562a IPR036979 APE_0562a APE_0564 IPR000453 Chorismate synthase APE_0564 IPR020541 Chorismate synthase, conserved site APE_0564 IPR035904 APE_0564 APE_0569 IPR001986 Enolpyruvate transferase domain APE_0569 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase APE_0569 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta APE_0569 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site APE_0569 IPR036968 APE_0569 APE_0572 IPR006204 GHMP kinase N-terminal domain APE_0572 IPR010189 Shikimate kinase, archaea APE_0572 IPR013750 GHMP kinase, C-terminal domain APE_0572 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_0572 IPR020568 Ribosomal protein S5 domain 2-type fold APE_0574.1 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APE_0574.1 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal APE_0574.1 IPR022893 Shikimate, quinate/shikimate dehydrogenase APE_0574.1 IPR036291 APE_0574.1 APE_0577 IPR001381 Dehydroquinase class I APE_0577 IPR013785 Aldolase-type TIM barrel APE_0579 IPR016037 3-dehydroquinate synthase AroB APE_0579 IPR030960 APE_0579 APE_0579 IPR030963 APE_0579 APE_0581.1 IPR006218 DAHP synthetase I/KDSA APE_0581.1 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 APE_0581.1 IPR013785 Aldolase-type TIM barrel APE_0583 IPR005475 Transketolase-like, pyrimidine-binding domain APE_0583 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II APE_0583 IPR029061 Thiamin diphosphate-binding fold APE_0583 IPR033248 APE_0583 APE_0586.1 IPR005474 Transketolase, N-terminal APE_0586.1 IPR029061 Thiamin diphosphate-binding fold APE_0588.1 IPR008928 Six-hairpin glycosidase-like APE_0588.1 IPR012341 Six-hairpin glycosidase APE_0591.1 IPR001753 Crotonase superfamily APE_0591.1 IPR029045 ClpP/crotonase-like domain APE_0594a.1 IPR036388 APE_0594a.1 APE_0594a.1 IPR036390 APE_0594a.1 APE_0594a.1 IPR038723 APE_0594a.1 APE_0595.1 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain APE_0595.1 IPR036188 APE_0595.1 APE_0600 IPR000086 NUDIX hydrolase domain APE_0600 IPR015797 NUDIX hydrolase domain-like APE_0601 IPR023214 HAD-like domain APE_0601 IPR036412 APE_0601 APE_0603 IPR003448 Molybdopterin biosynthesis MoaE APE_0603 IPR012675 Beta-grasp domain APE_0603 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APE_0603 IPR036563 APE_0603 APE_0605.1 IPR002035 von Willebrand factor, type A APE_0605.1 IPR036465 APE_0605.1 APE_0607 IPR000209 Peptidase S8/S53 domain APE_0607 IPR015500 Peptidase S8, subtilisin-related APE_0607 IPR023827 Peptidase S8, subtilisin, Asp-active site APE_0607 IPR023828 Peptidase S8, subtilisin, Ser-active site APE_0607 IPR036852 APE_0607 APE_0614.1 IPR013373 Flagellin/pilin, N-terminal APE_0620.1 IPR008969 Carboxypeptidase-like, regulatory domain APE_0620.1 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily APE_0620a IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APE_0621.1 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase APE_0621.1 IPR010946 Geranylgeranylglyceryl phosphate synthase APE_0621.1 IPR038597 APE_0621.1 APE_0623.1 IPR007808 Transcription elongation factor 1 APE_0624.1 IPR000043 Adenosylhomocysteinase APE_0624.1 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APE_0624.1 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site APE_0624.1 IPR034373 APE_0624.1 APE_0624.1 IPR036291 APE_0624.1 APE_0632.1 IPR002933 Peptidase M20 APE_0632.1 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase APE_0632.1 IPR011650 Peptidase M20, dimerisation domain APE_0632.1 IPR036264 APE_0632.1 APE_0636 IPR001279 Beta-lactamase-like APE_0636 IPR036866 APE_0636 APE_0639.1 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic APE_0639.1 IPR016067 S-adenosylmethionine decarboxylase, core APE_0639.1 IPR017716 S-adenosylmethionine decarboxylase proenzyme APE_0640 IPR035994 APE_0640 APE_0641 IPR013766 Thioredoxin domain APE_0641 IPR017937 Thioredoxin, conserved site APE_0641 IPR036249 APE_0641 APE_0644.1 IPR007197 Radical SAM APE_0644.1 IPR013785 Aldolase-type TIM barrel APE_0650.1 IPR000121 PEP-utilising enzyme, C-terminal APE_0650.1 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding APE_0650.1 IPR006319 Phosphoenolpyruvate synthase APE_0650.1 IPR008279 PEP-utilising enzyme, mobile domain APE_0650.1 IPR013815 ATP-grasp fold, subdomain 1 APE_0650.1 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain APE_0650.1 IPR018274 PEP-utilising enzyme, active site APE_0650.1 IPR023151 PEP-utilising enzyme, conserved site APE_0650.1 IPR036637 APE_0650.1 APE_0650a.1 IPR016482 Protein transport protein SecG/Sec61-beta/Sbh1 APE_0650a.1 IPR023531 Preprotein translocase subunit SecG APE_0656.1 IPR013696 Domain of unknown function DUF1743 APE_0656.1 IPR024913 tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS APE_0656a IPR011008 Dimeric alpha-beta barrel APE_0656a IPR019887 Transcription regulator AsnC-type, C-terminal APE_0662.1 IPR004154 Anticodon-binding APE_0662.1 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit APE_0662.1 IPR015807 Histidine-tRNA ligase APE_0662.1 IPR036621 APE_0662.1 APE_0663 IPR007527 Zinc finger, SWIM-type APE_0665 IPR004788 Ribose 5-phosphate isomerase, type A APE_0665 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup APE_0665 IPR037171 APE_0665 APE_0669.1 IPR004305 Thiaminase-2/PQQC APE_0669.1 IPR016084 Haem oxygenase-like, multi-helical APE_0669.1 IPR027574 Thiaminase II APE_0671 IPR011701 Major facilitator superfamily APE_0671 IPR036259 APE_0671 APE_0672.1 IPR001236 Lactate/malate dehydrogenase, N-terminal APE_0672.1 IPR001557 L-lactate/malate dehydrogenase APE_0672.1 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal APE_0672.1 IPR022383 Lactate/malate dehydrogenase, C-terminal APE_0672.1 IPR036291 APE_0672.1 APE_0673.1 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family APE_0674.1 IPR004839 Aminotransferase, class I/classII APE_0674.1 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_0674.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_0675.1 IPR002547 tRNA-binding domain APE_0675.1 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal APE_0675.1 IPR012340 Nucleic acid-binding, OB-fold APE_0676 IPR003700 Ketopantoate hydroxymethyltransferase APE_0676 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain APE_0677.1 IPR003710 Ketopantoate reductase ApbA/PanE APE_0677.1 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like APE_0677.1 IPR013328 Dehydrogenase, multihelical APE_0677.1 IPR013332 Ketopantoate reductase, N-terminal domain APE_0677.1 IPR013752 Ketopantoate reductase, C-terminal domain APE_0680.1 IPR006683 Thioesterase superfamily APE_0680.1 IPR029069 HotDog domain APE_0680a.1 IPR003831 Protein of unknown function DUF211 APE_0680a.1 IPR023129 MTH889-like domain APE_0681.1 IPR028090 JAB domain, prokaryotic APE_0682.1 IPR000979 Phosphodiesterase MJ0936/Vps29 APE_0682.1 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APE_0682.1 IPR029052 Metallo-dependent phosphatase-like APE_0682a.1 IPR019270 Protein of unknown function DUF2283 APE_0683 IPR006386 HAD-superfamily hydrolase, subfamily IB, PSPase-like, archaeal APE_0683 IPR023214 HAD-like domain APE_0683 IPR036412 APE_0683 APE_0685 IPR006677 tRNA intron endonuclease, catalytic domain-like APE_0685 IPR011856 tRNA endonuclease-like domain APE_0685 IPR036167 APE_0685 APE_0686 IPR000649 Initiation factor 2B-related APE_0686 IPR005251 Methylthioribose-1-phosphate isomerase APE_0686 IPR011559 Initiation factor 2B alpha/beta/delta APE_0686 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain APE_0686 IPR037171 APE_0686 APE_0688 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APE_0688 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APE_0689.1 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site APE_0689.1 IPR024084 Isopropylmalate dehydrogenase-like domain APE_0695.1 IPR001482 Type II secretion system protein E APE_0695.1 IPR003593 AAA+ ATPase domain APE_0695.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0697 IPR013373 Flagellin/pilin, N-terminal APE_0698.1 IPR002773 Deoxyhypusine synthase APE_0698.1 IPR022899 Deoxyhypusine synthase, putative, archaeal APE_0698.1 IPR029035 DHS-like NAD/FAD-binding domain APE_0698.1 IPR036982 APE_0698.1 APE_0702.1 IPR003115 ParB/Sulfiredoxin APE_0702.1 IPR036086 APE_0702.1 APE_0703.1 IPR002815 Spo11/DNA topoisomerase VI subunit A APE_0703.1 IPR004085 DNA topoisomerase VI, subunit A APE_0703.1 IPR013049 Spo11/DNA topoisomerase VI, subunit A, N-terminal APE_0703.1 IPR036078 APE_0703.1 APE_0703.1 IPR036388 APE_0703.1 APE_0706.1 IPR003594 Histidine kinase-like ATPase, C-terminal domain APE_0706.1 IPR005734 DNA topoisomerase VI, subunit B APE_0706.1 IPR010979 Ribosomal protein S13-like, H2TH APE_0706.1 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_0706.1 IPR015320 DNA topoisomerase VI, subunit B, transducer APE_0706.1 IPR020568 Ribosomal protein S5 domain 2-type fold APE_0706.1 IPR036890 APE_0706.1 APE_0708.1 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APE_0708.1 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding APE_0708.1 IPR036856 APE_0708.1 APE_0708.1 IPR037165 APE_0708.1 APE_0710.1 IPR011257 DNA glycosylase APE_0710.1 IPR015254 N-glycosylase/DNA lyase-like, archaea APE_0710.1 IPR016544 N-glycosylase/DNA lyase, archaea APE_0710.1 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APE_0712.1 IPR010197 O-succinylbenzoate synthase, low GC Gram-positive bacteria-type APE_0712.1 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APE_0712.1 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APE_0712.1 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site APE_0712.1 IPR029017 Enolase N-terminal domain-like APE_0712.1 IPR029065 Enolase C-terminal domain-like APE_0712.1 IPR036849 APE_0712.1 APE_0715.1 IPR003445 Cation transporter APE_0716.1 IPR013762 Integrase-like, catalytic core APE_0716.1 IPR031857 APE_0716.1 APE_0720a IPR005471 Transcription regulator IclR, N-terminal APE_0720a IPR036388 APE_0720a APE_0720a IPR036390 APE_0720a APE_0722 IPR036390 APE_0722 APE_0722a IPR036388 APE_0722a APE_0722a IPR036390 APE_0722a APE_0727 IPR026071 Glycosyl hydrolase family 99 APE_0739 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APE_0739 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_0739 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain APE_0739 IPR036250 APE_0739 APE_0741 IPR001189 Manganese/iron superoxide dismutase APE_0741 IPR019831 Manganese/iron superoxide dismutase, N-terminal APE_0741 IPR019832 Manganese/iron superoxide dismutase, C-terminal APE_0741 IPR019833 Manganese/iron superoxide dismutase, binding site APE_0741 IPR036314 APE_0741 APE_0741 IPR036324 APE_0741 APE_0745.1 IPR003587 Hint domain N-terminal APE_0745.1 IPR006141 Intein splice site APE_0745.1 IPR006142 Intein APE_0745.1 IPR014774 Circadian clock protein KaiC/DNA repair protein RadA APE_0745.1 IPR022443 KaiC-related APE_0745.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0745.1 IPR027434 Homing endonuclease APE_0745.1 IPR030934 APE_0745.1 APE_0745.1 IPR036844 APE_0745.1 APE_0748.1 IPR007064 NMD3 APE_0748a IPR001253 Translation initiation factor 1A (eIF-1A) APE_0748a IPR006196 RNA-binding domain, S1, IF1 type APE_0748a IPR012340 Nucleic acid-binding, OB-fold APE_0748a IPR018104 Translation initiation factor 1A (eIF-1A), conserved site APE_0751 IPR000687 RIO kinase APE_0751 IPR011009 Protein kinase-like domain APE_0751 IPR018935 RIO kinase, conserved site APE_0754.1 IPR004087 K Homology domain APE_0754.1 IPR004088 K Homology domain, type 1 APE_0754.1 IPR019964 KH domain protein, archaea APE_0754.1 IPR036612 APE_0754.1 APE_0756.1 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding APE_0756.1 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like APE_0756.1 IPR013328 Dehydrogenase, multihelical APE_0756.1 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type APE_0756.1 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain APE_0756.1 IPR036291 APE_0756.1 APE_0759.1 IPR036188 APE_0759.1 APE_0760.1 IPR007842 HEPN APE_0761.1 IPR002934 Nucleotidyl transferase domain APE_0763.1 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain APE_0763.1 IPR036291 APE_0763.1 APE_0766 IPR006382 SPP-like hydrolase, archaeal APE_0766 IPR023214 HAD-like domain APE_0766 IPR036412 APE_0766 APE_0767.1 IPR001045 Spermidine/spermine synthases family APE_0767.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0767.1 IPR030373 APE_0767.1 APE_0767.1 IPR035246 APE_0767.1 APE_0767.1 IPR037163 APE_0767.1 APE_0768.1 IPR011857 Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase APE_0768.1 IPR019490 Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase, C-terminal APE_0771.1 IPR007254 Protein of unknown function DUF373 APE_0772 IPR002778 Signal recognition particle, SRP19 subunit APE_0772 IPR022938 Signal recognition particle, SRP19 subunit, archaeal-type APE_0772 IPR036521 APE_0772 APE_0775 IPR011903 Glutaredoxin-like domain APE_0775 IPR012336 Thioredoxin-like fold APE_0775 IPR036249 APE_0775 APE_0777 IPR004843 Calcineurin-like phosphoesterase domain, apaH type APE_0777 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase APE_0777 IPR029052 Metallo-dependent phosphatase-like APE_0778 IPR001387 Cro/C1-type helix-turn-helix domain APE_0778 IPR010982 Lambda repressor-like, DNA-binding domain APE_0778 IPR020886 Transcription regulator HTH, Cro/C1-type DNA-binding APE_0781.1 IPR004948 Nucleoside-triphosphatase, THEP1 type APE_0781.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0782.1 IPR002905 tRNA methyltransferase, Trm1 APE_0782.1 IPR022923 tRNA (guanine(26)-N(2))-dimethyltransferase, archaeal and bacterial APE_0782.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0784.1 IPR000835 MarR-type HTH domain APE_0784.1 IPR036388 APE_0784.1 APE_0784.1 IPR036390 APE_0784.1 APE_0785.1 IPR000644 CBS domain APE_0786.1 IPR009000 Translation protein, beta-barrel domain APE_0786.1 IPR038664 APE_0786.1 APE_0787.1 IPR000812 Transcription factor TFIIB APE_0787.1 IPR013150 Transcription factor TFIIB, cyclin-like domain APE_0787.1 IPR013763 Cyclin-like APE_0787.1 IPR023486 Transcription factor TFIIB, conserved site APE_0787.1 IPR036915 APE_0787.1 APE_0788.1 IPR002786 Non-canonical purine NTP phosphatase APE_0788.1 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 APE_0788.1 IPR029001 Inosine triphosphate pyrophosphatase-like APE_0789 IPR001047 Ribosomal protein S8e APE_0789 IPR018283 Ribosomal protein S8e, conserved site APE_0789 IPR020919 Ribosomal protein S8e, archaeal APE_0789 IPR022309 Ribosomal protein S8e/ribosomal biogenesis NSA2 APE_0791.1 IPR004130 Uncharacterised protein family, ATP binding APE_0791.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0792.1 IPR001505 Copper centre Cu(A) APE_0792.1 IPR002429 Cytochrome c oxidase subunit II C-terminal APE_0792.1 IPR008972 Cupredoxin APE_0792.1 IPR014222 Cytochrome c oxidase, subunit II APE_0793.1 IPR000298 Cytochrome c oxidase subunit III domain APE_0793.1 IPR000883 Cytochrome c oxidase subunit I APE_0793.1 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle APE_0793.1 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site APE_0793.1 IPR035973 APE_0793.1 APE_0793.1 IPR036927 APE_0793.1 APE_0795.1 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes APE_0796.1 IPR003782 Copper chaperone SCO1/SenC APE_0796.1 IPR036249 APE_0796.1 APE_0797 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY APE_0797 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APE_0797 IPR029028 Alpha/beta knot methyltransferases APE_0798 IPR007318 Phospholipid methyltransferase APE_0800.1 IPR006076 FAD dependent oxidoreductase APE_0800.1 IPR036188 APE_0800.1 APE_0801.1 IPR002828 Survival protein SurE-like phosphatase/nucleotidase APE_0801.1 IPR030048 APE_0801.1 APE_0801.1 IPR036523 APE_0801.1 APE_0803.1 IPR011005 Dihydropteroate synthase-like APE_0805 IPR002104 Integrase, catalytic APE_0805 IPR010998 Integrase, Lambda-type, N-terminal APE_0805 IPR011010 DNA breaking-rejoining enzyme, catalytic core APE_0805 IPR013762 Integrase-like, catalytic core APE_0805 IPR033686 APE_0805 APE_0807.1 IPR005931 Delta-1-pyrroline-5-carboxylate dehydrogenase APE_0807.1 IPR015590 Aldehyde dehydrogenase domain APE_0807.1 IPR016160 Aldehyde dehydrogenase, cysteine active site APE_0807.1 IPR016161 Aldehyde/histidinol dehydrogenase APE_0807.1 IPR016162 Aldehyde dehydrogenase, N-terminal APE_0807.1 IPR016163 Aldehyde dehydrogenase, C-terminal APE_0807.1 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APE_0809.1 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain APE_0809.1 IPR002320 Threonine-tRNA ligase, class IIa APE_0809.1 IPR004154 Anticodon-binding APE_0809.1 IPR036621 APE_0809.1 APE_0812 IPR011257 DNA glycosylase APE_0812 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APE_0815.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0815.1 IPR030382 APE_0815.1 APE_0816 IPR003827 tRNA wybutosine-synthesizing protein APE_0816 IPR022908 Uncharacterised protein family UPF0130 APE_0816 IPR036602 APE_0816 APE_0818.1 IPR002104 Integrase, catalytic APE_0818.1 IPR011010 DNA breaking-rejoining enzyme, catalytic core APE_0818.1 IPR013762 Integrase-like, catalytic core APE_0821 IPR036390 APE_0821 APE_0824 IPR001915 Peptidase M48 APE_0833.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0843.1 IPR008928 Six-hairpin glycosidase-like APE_0859 IPR009003 Trypsin-like cysteine/serine peptidase domain APE_0872.1 IPR001525 C-5 cytosine methyltransferase APE_0872.1 IPR018117 DNA methylase, C-5 cytosine-specific, active site APE_0872.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0875.1 IPR003265 HhH-GPD domain APE_0875.1 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif APE_0875.1 IPR004035 Endonuclease III, iron-sulphur binding site APE_0875.1 IPR011257 DNA glycosylase APE_0875.1 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APE_0880 IPR003593 AAA+ ATPase domain APE_0880 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0880a IPR036388 APE_0880a APE_0880a IPR036390 APE_0880a APE_0880b IPR005471 Transcription regulator IclR, N-terminal APE_0880b IPR036388 APE_0880b APE_0880b IPR036390 APE_0880b APE_0883a IPR002145 Ribbon-helix-helix protein, copG APE_0887.1 IPR006379 HAD-superfamily hydrolase, subfamily IIB APE_0887.1 IPR006381 HAD-superfamily hydrolase, superfamily IIB, YedP APE_0887.1 IPR012815 Mannosyl-3-phosphoglycerate phosphatase-related APE_0887.1 IPR023214 HAD-like domain APE_0887.1 IPR033980 APE_0887.1 APE_0887.1 IPR036412 APE_0887.1 APE_0889.1 IPR012812 Mannosyl-3-phosphoglycerate synthase APE_0889.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_0890 IPR021799 Protein of unknown function DUF3368 APE_0890a.1 IPR005368 Uncharacterised protein family UPF0175 APE_0891 IPR008457 Copper resistance D APE_0892.1 IPR003593 AAA+ ATPase domain APE_0892.1 IPR011704 ATPase, dynein-related, AAA domain APE_0892.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0896.1 IPR013373 Flagellin/pilin, N-terminal APE_0900.1 IPR016181 Acyl-CoA N-acyltransferase APE_0900.1 IPR031165 APE_0900.1 APE_0903.1 IPR009000 Translation protein, beta-barrel domain APE_0903.1 IPR012947 Threonyl/alanyl tRNA synthetase, SAD APE_0903.1 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain APE_0903.1 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal APE_0907.1 IPR002194 Chaperonin TCP-1, conserved site APE_0907.1 IPR002423 Chaperonin Cpn60/TCP-1 APE_0907.1 IPR012714 Thermosome, archaeal APE_0907.1 IPR017998 Chaperone tailless complex polypeptide 1 (TCP-1) APE_0907.1 IPR027409 GroEL-like apical domain APE_0907.1 IPR027410 TCP-1-like chaperonin intermediate domain APE_0907.1 IPR027413 GroEL-like equatorial domain APE_0912 IPR002347 Glucose/ribitol dehydrogenase APE_0912 IPR036291 APE_0912 APE_0914 IPR006110 RNA polymerase, subunit omega/K/RPB6 APE_0914 IPR006111 Archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit APE_0914 IPR012293 RNA polymerase subunit, RPB6/omega APE_0914 IPR020708 DNA-directed RNA polymerase, 14-18kDa subunit, conserved site APE_0914 IPR036161 APE_0914 APE_0915.1 IPR008915 Peptidase M50 APE_0916.1 IPR003462 Ornithine cyclodeaminase/mu-crystallin APE_0916.1 IPR023401 Ornithine cyclodeaminase, N-terminal APE_0916.1 IPR036291 APE_0916.1 APE_0917 IPR028081 Leucine-binding protein domain APE_0917 IPR028082 Periplasmic binding protein-like I APE_0919 IPR003439 ABC transporter-like APE_0919 IPR003593 AAA+ ATPase domain APE_0919 IPR017871 ABC transporter, conserved site APE_0919 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0919 IPR032823 APE_0919 APE_0921 IPR003439 ABC transporter-like APE_0921 IPR003593 AAA+ ATPase domain APE_0921 IPR017871 ABC transporter, conserved site APE_0921 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0922 IPR001851 ABC transporter, permease APE_0924.1 IPR001851 ABC transporter, permease APE_0929.1 IPR002155 Thiolase APE_0929.1 IPR016039 Thiolase-like APE_0929.1 IPR020616 Thiolase, N-terminal APE_0929.1 IPR020617 Thiolase, C-terminal APE_0930.1 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal APE_0930.1 IPR012340 Nucleic acid-binding, OB-fold APE_0930.1 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal APE_0931 IPR000878 Tetrapyrrole methylase APE_0931 IPR004551 Diphthine synthase APE_0931 IPR014776 Tetrapyrrole methylase, subdomain 2 APE_0931 IPR014777 Tetrapyrrole methylase, subdomain 1 APE_0931 IPR035996 APE_0931 APE_0932.1 IPR007197 Radical SAM APE_0935 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain APE_0935 IPR036188 APE_0935 APE_0938.1 IPR011009 Protein kinase-like domain APE_0939 IPR007547 Uncharacterised protein family UPF0248 APE_0941 IPR000515 MetI-like domain APE_0941 IPR035906 APE_0941 APE_0943 IPR000515 MetI-like domain APE_0943 IPR035906 APE_0943 APE_0944.1 IPR003439 ABC transporter-like APE_0944.1 IPR003593 AAA+ ATPase domain APE_0944.1 IPR008995 Molybdate/tungstate binding, C-terminal APE_0944.1 IPR013611 Transport-associated OB, type 2 APE_0944.1 IPR017871 ABC transporter, conserved site APE_0944.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0945.1 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein APE_0945.1 IPR006059 Bacterial extracellular solute-binding, family 1 APE_0946 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein APE_0946 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site APE_0946 IPR009051 Alpha-helical ferredoxin APE_0946 IPR012675 Beta-grasp domain APE_0946 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_0946 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_0946 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal APE_0946 IPR036010 APE_0946 APE_0947 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit APE_0947 IPR034804 APE_0947 APE_0948.1 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit APE_0948.1 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit APE_0948.1 IPR034804 APE_0948.1 APE_0950.1 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site APE_0950.1 IPR003953 FAD binding domain APE_0950.1 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit APE_0950.1 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal APE_0950.1 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APE_0950.1 IPR036188 APE_0950.1 APE_0950.1 IPR037099 APE_0950.1 APE_0951.1 IPR002930 Glycine cleavage system H-protein APE_0951.1 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APE_0951.1 IPR011053 Single hybrid motif APE_0951.1 IPR017453 Glycine cleavage system H-protein, subgroup APE_0951.1 IPR033753 APE_0951.1 APE_0952.1 IPR001754 Orotidine 5'-phosphate decarboxylase domain APE_0952.1 IPR011060 Ribulose-phosphate binding barrel APE_0952.1 IPR013785 Aldolase-type TIM barrel APE_0954 IPR003785 Creatininase/formamide hydrolase APE_0954 IPR024087 Creatininase-like domain APE_0955 IPR005821 Ion transport domain APE_0957 IPR002793 Endonuclease NucS APE_0957 IPR011856 tRNA endonuclease-like domain APE_0957a IPR001163 Ribonucleoprotein LSM domain APE_0957a IPR010920 Like-Sm (LSM) domain APE_0959 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site APE_0959 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding APE_0959 IPR036217 APE_0959 APE_0959 IPR036388 APE_0959 APE_0960 IPR003593 AAA+ ATPase domain APE_0960 IPR003959 ATPase, AAA-type, core APE_0960 IPR007330 MIT APE_0960 IPR015415 Vps4 oligomerisation, C-terminal APE_0960 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0960 IPR036181 APE_0960 APE_0962 IPR036388 APE_0962 APE_0962 IPR036390 APE_0962 APE_0964.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_0965.1 IPR000620 Drug/metabolite transporter APE_0966.1 IPR004843 Calcineurin-like phosphoesterase domain, apaH type APE_0966.1 IPR029052 Metallo-dependent phosphatase-like APE_0972.1 IPR001734 Sodium/solute symporter APE_0972.1 IPR038377 APE_0972.1 APE_0973.1 IPR010581 Protein of unknown function DUF1152 APE_0973b IPR002145 Ribbon-helix-helix protein, copG APE_0973b IPR010985 Ribbon-helix-helix APE_0974.1 IPR000644 CBS domain APE_0974.1 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain APE_0974.1 IPR016436 Uncharacterised conserved protein UCP005063, CBS-type APE_0974.1 IPR036388 APE_0974.1 APE_0974.1 IPR036390 APE_0974.1 APE_0975 IPR018693 Protein of unknown function DUF2192 APE_0976.1 IPR008991 Translation protein SH3-like domain APE_0976.1 IPR014722 Ribosomal protein L2 domain 2 APE_0976.1 IPR023651 Ribosomal protein L14e APE_0978.1 IPR011892 Cytidylate kinase, putative APE_0978.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0978a IPR008195 Ribosomal protein L34Ae APE_0978a IPR018065 Ribosomal protein L34e, conserved site APE_0978a IPR038562 APE_0978a APE_0979.1 IPR023631 Amidase signature domain APE_0979.1 IPR036928 APE_0979.1 APE_0981.1 IPR003593 AAA+ ATPase domain APE_0981.1 IPR023477 Adenylate kinase AdkA APE_0981.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0983.1 IPR002208 SecY/SEC61-alpha family APE_0983.1 IPR019561 Translocon Sec61/SecY, plug domain APE_0983.1 IPR023201 SecY subunit domain APE_0983.1 IPR026593 Protein translocase subunit SecY APE_0983.1 IPR030659 APE_0983.1 APE_0986.1 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB APE_0986.1 IPR017945 DHBP synthase RibB-like alpha/beta domain APE_0988 IPR002180 6,7-dimethyl-8-ribityllumazine synthase APE_0988 IPR006399 Riboflavin synthase, archaeal APE_0988 IPR036467 APE_0988 APE_0993.1 IPR000845 Nucleoside phosphorylase domain APE_0993.1 IPR035994 APE_0993.1 APE_0996.1 IPR007835 MOFRL domain APE_0996.1 IPR025286 MOFRL-associated domain APE_0996.1 IPR037035 APE_0996.1 APE_0996.1 IPR038614 APE_0996.1 APE_1000.1 IPR004864 Late embryogenesis abundant protein, LEA-14 APE_1001.1 IPR016570 Uncharacterised conserved protein UCP010361, membrane APE_1001.1 IPR018584 Protein of unknown function DUF2029 APE_1003.1 IPR007484 Peptidase M28 APE_1007a IPR001529 DNA-directed RNA polymerase, M/15kDa subunit APE_1009.1 IPR007171 Protein of unknown function DUF371 APE_1009.1 IPR023131 Mth639-like domain APE_1011.1 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase APE_1011.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_1013.1 IPR012859 Pilin/Protein of unknown function DUF1628, archaeal APE_1013.1 IPR013373 Flagellin/pilin, N-terminal APE_1014.1 IPR001130 TatD family APE_1014.1 IPR011589 Protein of unknown function UCP004961 APE_1014.1 IPR032466 APE_1014.1 APE_1015 IPR002300 Aminoacyl-tRNA synthetase, class Ia APE_1015 IPR004493 Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic APE_1015 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain APE_1015 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding APE_1015 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APE_1015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1015 IPR020791 Leucine-tRNA ligase, archaeal APE_1023.1 IPR002220 DapA-like APE_1023.1 IPR013785 Aldolase-type TIM barrel APE_1026.1 IPR003439 ABC transporter-like APE_1026.1 IPR003593 AAA+ ATPase domain APE_1026.1 IPR017871 ABC transporter, conserved site APE_1026.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1031.1 IPR002035 von Willebrand factor, type A APE_1031.1 IPR036465 APE_1031.1 APE_1035.1 IPR003593 AAA+ ATPase domain APE_1035.1 IPR011704 ATPase, dynein-related, AAA domain APE_1035.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1038.1 IPR002125 CMP/dCMP deaminase, zinc-binding APE_1038.1 IPR006262 Cytidine deaminase, homotetrameric APE_1038.1 IPR016192 APOBEC/CMP deaminase, zinc-binding APE_1038.1 IPR016193 Cytidine deaminase-like APE_1041 IPR009577 Putative small multi-drug export APE_1043.1 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain APE_1043.1 IPR036188 APE_1043.1 APE_1044 IPR000415 Nitroreductase-like APE_1044 IPR016446 Flavin oxidoreductase Frp family APE_1044 IPR029479 Nitroreductase APE_1045.1 IPR001915 Peptidase M48 APE_1045.1 IPR022919 Peptidase M48, protease HtpX, putative APE_1047.1 IPR000649 Initiation factor 2B-related APE_1047.1 IPR037171 APE_1047.1 APE_1049.1 IPR002491 ABC transporter periplasmic binding domain APE_1053.1 IPR000522 ABC transporter, permease protein APE_1053.1 IPR037294 APE_1053.1 APE_1055.1 IPR003439 ABC transporter-like APE_1055.1 IPR003593 AAA+ ATPase domain APE_1055.1 IPR017871 ABC transporter, conserved site APE_1055.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1056.1 IPR002733 AMMECR1 domain APE_1056.1 IPR023472 Uncharacterised protein family MJ0810 APE_1056.1 IPR023473 AMMECR1 APE_1056.1 IPR027485 AMMECR1, N-terminal APE_1056.1 IPR027623 AmmeMemoRadiSam system protein A APE_1056.1 IPR036071 APE_1056.1 APE_1059 IPR007197 Radical SAM APE_1059 IPR013785 Aldolase-type TIM barrel APE_1059 IPR013917 tRNA wybutosine-synthesis APE_1059 IPR023993 Wyosine biosynthesis TYW1, radical SAM-type APE_1061.1 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II APE_1061.1 IPR005982 Thioredoxin reductase APE_1061.1 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain APE_1061.1 IPR036188 APE_1061.1 APE_1065.1 IPR005809 Succinyl-CoA synthetase, beta subunit APE_1065.1 IPR005811 ATP-citrate lyase/succinyl-CoA ligase APE_1065.1 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type APE_1065.1 IPR013815 ATP-grasp fold, subdomain 1 APE_1065.1 IPR016102 Succinyl-CoA synthetase-like APE_1065.1 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site APE_1072.1 IPR003781 CoA-binding APE_1072.1 IPR005810 Succinyl-CoA ligase, alpha subunit APE_1072.1 IPR005811 ATP-citrate lyase/succinyl-CoA ligase APE_1072.1 IPR016102 Succinyl-CoA synthetase-like APE_1072.1 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site APE_1072.1 IPR033847 APE_1072.1 APE_1072.1 IPR036291 APE_1072.1 APE_1073 IPR001650 Helicase, C-terminal APE_1073 IPR006935 Helicase/UvrB domain APE_1073 IPR014001 Helicase, superfamily 1/2, ATP-binding domain APE_1073 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1073 IPR032438 APE_1073 APE_1080.1 IPR000836 Phosphoribosyltransferase domain APE_1080.1 IPR029057 Phosphoribosyltransferase-like APE_1081.1 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain APE_1081.1 IPR003593 AAA+ ATPase domain APE_1081.1 IPR004390 Signal-recognition particle receptor FtsY APE_1081.1 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle APE_1081.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1081.1 IPR036225 APE_1081.1 APE_1084.1 IPR004127 Prefoldin alpha-like APE_1084.1 IPR009053 Prefoldin APE_1084.1 IPR011599 Prefoldin alpha subunit APE_1084a IPR002768 50S ribosomal protein L18Ae, archaea APE_1084a IPR023573 Ribosomal protein L18a/LX APE_1084a IPR028877 50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a APE_1085 IPR002769 Translation initiation factor IF6 APE_1087.1 IPR000054 Ribosomal protein L31e APE_1087.1 IPR020052 Ribosomal protein L31e, conserved site APE_1087.1 IPR023621 Ribosomal protein L31e domain APE_1087a IPR000077 Ribosomal protein L39e APE_1087a IPR020083 Ribosomal protein L39e, conserved site APE_1087a IPR023626 Ribosomal protein L39e domain APE_1087b IPR002836 PDCD5-related protein APE_1087b IPR022889 DNA-binding protein, archaeal APE_1087b IPR036883 APE_1087b APE_1090 IPR001266 Ribosomal protein S19e APE_1090 IPR018277 Ribosomal protein S19e, conserved site APE_1090 IPR027548 Ribosomal protein S19e, archaeal APE_1090 IPR036390 APE_1090 APE_1090 IPR038111 APE_1090 APE_1091 IPR001890 RNA-binding, CRM domain APE_1091 IPR035920 APE_1091 APE_1092.1 IPR007175 RNAse P, Rpr2/Rpp21 subunit APE_1092.1 IPR016432 Ribonuclease P, protein component 4 APE_1094.1 IPR000977 DNA ligase, ATP-dependent APE_1094.1 IPR012308 DNA ligase, ATP-dependent, N-terminal APE_1094.1 IPR012309 DNA ligase, ATP-dependent, C-terminal APE_1094.1 IPR012310 DNA ligase, ATP-dependent, central APE_1094.1 IPR012340 Nucleic acid-binding, OB-fold APE_1094.1 IPR016059 DNA ligase, ATP-dependent, conserved site APE_1094.1 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal APE_1094.1 IPR036599 APE_1094.1 APE_1098 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p APE_1098 IPR002478 PUA domain APE_1098 IPR004521 Uncharacterised domain CHP00451 APE_1098 IPR015947 PUA-like domain APE_1098 IPR023267 RNA (C5-cytosine) methyltransferase APE_1098 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_1102 IPR002716 PIN domain APE_1102 IPR022907 VapC family APE_1102 IPR029060 PIN domain-like APE_1102 IPR033411 APE_1102 APE_1104.1 IPR002504 Inorganic polyphosphate/ATP-NAD kinase APE_1104.1 IPR016064 ATP-NAD kinase-like domain APE_1104.1 IPR017437 ATP-NAD kinase, PpnK-type, all-beta APE_1104.1 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 APE_1106.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_1106.1 IPR030382 APE_1106.1 APE_1109.1 IPR002803 Fructose-1,6-bisphosphatase, class V APE_1109.1 IPR036076 APE_1109.1 APE_1114.1 IPR000994 Peptidase M24, structural domain APE_1114.1 IPR001714 Peptidase M24, methionine aminopeptidase APE_1114.1 IPR002468 Peptidase M24A, methionine aminopeptidase, subfamily 2 APE_1114.1 IPR028595 Methionine aminopeptidase, archaeal APE_1114.1 IPR036005 APE_1114.1 APE_1114.1 IPR036388 APE_1114.1 APE_1114.1 IPR036390 APE_1114.1 APE_1117 IPR001279 Beta-lactamase-like APE_1117 IPR022877 Protein of unknown funcion UPF0173 APE_1117 IPR036866 APE_1117 APE_1119.1 IPR003439 ABC transporter-like APE_1119.1 IPR003593 AAA+ ATPase domain APE_1119.1 IPR007209 RNase L inhibitor RLI, possible metal-binding domain APE_1119.1 IPR013283 ABC transporter, ABCE APE_1119.1 IPR017871 ABC transporter, conserved site APE_1119.1 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_1119.1 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_1119.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1123.1 IPR009995 Protein of unknown function DUF1512 APE_1129 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding APE_1129 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APE_1129 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1129 IPR014758 Methionyl-tRNA synthetase APE_1129 IPR015413 Methionyl/Leucyl tRNA synthetase APE_1129 IPR023458 Methionine-tRNA ligase, type 1 APE_1129 IPR029038 Methionyl-tRNA synthetase, Zn-domain APE_1129 IPR033911 APE_1129 APE_1132.1 IPR001976 Ribosomal protein S24e APE_1132.1 IPR012677 Nucleotide-binding, alpha-beta plait APE_1132.1 IPR012678 Ribosomal protein L23/L15e core domain APE_1132.1 IPR018098 Ribosomal S24e conserved site APE_1132a IPR002906 Ribosomal protein S27a APE_1132a IPR011332 Zinc-binding ribosomal protein APE_1132a IPR022845 Ribosomal protein S27ae APE_1132a IPR038582 APE_1132a APE_1135 IPR000905 Gcp-like domain APE_1135 IPR017860 Peptidase M22, conserved site APE_1135 IPR017861 Kae1/YgjD family APE_1135 IPR022449 tRNA N6-adenosine threonylcarbamoyltransferase, Kae1 APE_1135 IPR034680 APE_1135 APE_1136.1 IPR011009 Protein kinase-like domain APE_1136.1 IPR022495 Serine/threonine-protein kinase Bud32 APE_1138.1 IPR002637 Ham1-like protein APE_1138.1 IPR020922 Non-canonical purine NTP pyrophosphatase APE_1138.1 IPR029001 Inosine triphosphate pyrophosphatase-like APE_1139 IPR000589 Ribosomal protein S15 APE_1139 IPR009068 S15/NS1, RNA-binding APE_1139 IPR012606 Ribosomal protein S13/S15, N-terminal APE_1139 IPR023029 Ribosomal protein S15P APE_1140.1 IPR001048 Aspartate/glutamate/uridylate kinase APE_1140.1 IPR001341 Aspartate kinase domain APE_1140.1 IPR002912 ACT domain APE_1140.1 IPR005260 Aspartate kinase, monofunctional class APE_1140.1 IPR036393 APE_1140.1 APE_1143 IPR000534 Semialdehyde dehydrogenase, NAD-binding APE_1143 IPR005676 Aspartate-semialdehyde dehydrogenase, peptidoglycan lacking APE_1143 IPR012280 Semialdehyde dehydrogenase, dimerisation domain APE_1143 IPR036291 APE_1143 APE_1144.1 IPR001342 Homoserine dehydrogenase, catalytic APE_1144.1 IPR019811 Homoserine dehydrogenase, conserved site APE_1144.1 IPR022697 Homoserine dehydrogenase lacking ACT domain APE_1144.1 IPR036291 APE_1144.1 APE_1154.1 IPR001593 Ribosomal protein S3Ae APE_1154.1 IPR018281 Ribosomal protein S3Ae, conserved site APE_1154.1 IPR030838 APE_1154.1 APE_1156.1 IPR004114 THUMP APE_1156.1 IPR025849 AF2226-like SPOUT RNA methylase fused to THUMP APE_1156.1 IPR029028 Alpha/beta knot methyltransferases APE_1158.1 IPR006638 Elongator protein 3/MiaB/NifB APE_1158.1 IPR007197 Radical SAM APE_1158.1 IPR023404 Radical SAM, alpha/beta horseshoe APE_1161.1 IPR002759 Ribonuclease P/MRP protein subunit APE_1161.1 IPR038085 APE_1161.1 APE_1164 IPR004095 TGS APE_1164 IPR006073 GTP binding domain APE_1164 IPR012675 Beta-grasp domain APE_1164 IPR012676 TGS-like APE_1164 IPR013646 Uncharacterised GTP-binding protein, C-terminal APE_1164 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1167.1 IPR002140 Ribosome maturation protein SBDS APE_1167.1 IPR018023 Ribosome maturation protein SBDS, conserved site APE_1167.1 IPR018978 Ribosome maturation protein SBDS, C-terminal APE_1167.1 IPR019783 Ribosome maturation protein SBDS, N-terminal APE_1167.1 IPR035647 APE_1167.1 APE_1167.1 IPR036786 APE_1167.1 APE_1167.1 IPR037188 APE_1167.1 APE_1169.1 IPR011152 Phosphoesterase MJ0912 APE_1169.1 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APE_1169.1 IPR029052 Metallo-dependent phosphatase-like APE_1178 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related APE_1178 IPR011051 RmlC-like cupin domain APE_1178 IPR014710 RmlC-like jelly roll fold APE_1179.1 IPR005913 dTDP-4-dehydrorhamnose reductase APE_1179.1 IPR029903 APE_1179.1 APE_1179.1 IPR036291 APE_1179.1 APE_1180 IPR005888 dTDP-glucose 4,6-dehydratase APE_1180 IPR016040 NAD(P)-binding domain APE_1180 IPR036291 APE_1180 APE_1181 IPR005835 Nucleotidyl transferase APE_1181 IPR005908 Glucose-1-phosphate thymidylyltransferase, long form APE_1181 IPR029044 Nucleotide-diphospho-sugar transferases APE_1182 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase APE_1182 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha APE_1182 IPR017850 Alkaline-phosphatase-like, core domain APE_1183 IPR013216 Methyltransferase type 11 APE_1183 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_1184 IPR001173 Glycosyltransferase 2-like APE_1184 IPR029044 Nucleotide-diphospho-sugar transferases APE_1186.1 IPR001296 Glycosyl transferase, family 1 APE_1188 IPR001296 Glycosyl transferase, family 1 APE_1189.1 IPR001173 Glycosyltransferase 2-like APE_1189.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_1190.1 IPR006342 Methyltransferase FkbM APE_1190.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_1191 IPR001296 Glycosyl transferase, family 1 APE_1191 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain APE_1192 IPR001173 Glycosyltransferase 2-like APE_1192 IPR029044 Nucleotide-diphospho-sugar transferases APE_1195.1 IPR002891 Adenylylsulphate kinase APE_1195.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1196.1 IPR002781 Transmembrane protein TauE like APE_1197.1 IPR002650 Sulphate adenylyltransferase APE_1197.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1197.1 IPR015947 PUA-like domain APE_1197.1 IPR020792 Sulphate adenylyltransferase, subgroup APE_1197.1 IPR024951 Sulphate adenylyltransferase catalytic domain APE_1197.1 IPR025980 ATP-sulfurylase PUA-like domain APE_1199 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase APE_1199 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha APE_1199 IPR017850 Alkaline-phosphatase-like, core domain APE_1202.1 IPR001451 Bacterial transferase hexapeptide repeat APE_1202.1 IPR005835 Nucleotidyl transferase APE_1202.1 IPR011004 Trimeric LpxA-like APE_1202.1 IPR023915 UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, archaeal-type APE_1202.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_1205.1 IPR001347 Sugar isomerase (SIS) APE_1205.1 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising APE_1205.1 IPR029055 Nucleophile aminohydrolases, N-terminal APE_1208.1 IPR001451 Bacterial transferase hexapeptide repeat APE_1208.1 IPR018357 Hexapeptide transferase, conserved site APE_1208.1 IPR025877 MobA-like NTP transferase domain APE_1208.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_1209a IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain APE_1209a IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APE_1209a IPR037069 APE_1209a APE_1209b IPR002716 PIN domain APE_1209b IPR029060 PIN domain-like APE_1209c.1 IPR008203 Uncharacterised protein family UPF0165 APE_1209c.1 IPR024069 AF2212-like domain APE_1209e IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_1209e IPR036250 APE_1209e APE_1209f IPR036250 APE_1209f APE_1211.1 IPR036388 APE_1211.1 APE_1211.1 IPR036390 APE_1211.1 APE_1213.1 IPR000209 Peptidase S8/S53 domain APE_1213.1 IPR015500 Peptidase S8, subtilisin-related APE_1213.1 IPR023828 Peptidase S8, subtilisin, Ser-active site APE_1213.1 IPR036852 APE_1213.1 APE_1216 IPR028933 Lebercilin domain APE_1221 IPR012431 Protein of unknown function DUF1626 APE_1221 IPR024271 Protein of unknown function DUF3782 APE_1223.1 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site APE_1223.1 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_1223.1 IPR036052 APE_1223.1 APE_1226 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APE_1226 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_1226 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_1226 IPR015424 Pyridoxal phosphate-dependent transferase APE_1228.1 IPR010156 CRISPR-associated protein, Cas6 APE_1228.1 IPR019267 CRISPR-associated protein Cas6 domain APE_1230 IPR010184 CRISPR-associated protein, MJ0385 APE_1231 IPR038257 APE_1231 APE_1232 IPR001650 Helicase, C-terminal APE_1232 IPR006474 Helicase Cas3, CRISPR-associated, core APE_1232 IPR011545 DEAD/DEAH box helicase domain APE_1232 IPR014001 Helicase, superfamily 1/2, ATP-binding domain APE_1232 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1234.1 IPR010153 CRISPR-associated protein, Cas5a type APE_1234.1 IPR013422 CRISPR-associated protein Cas5, N-terminal APE_1235 IPR002764 CRISPR-associated protein Cas7/Cst2/DevR, subtype I-a/Apern APE_1235 IPR010154 CRISPR-associated protein Cas7 APE_1237.1 IPR010163 CRISPR locus-related DNA-binding APE_1237.1 IPR036388 APE_1237.1 APE_1237.1 IPR036390 APE_1237.1 APE_1239.1 IPR011604 Exonuclease, phage-type/RecB, C-terminal APE_1239.1 IPR013343 CRISPR-associated protein Cas4 APE_1239.1 IPR022765 Dna2/Cas4, domain of unknown function DUF83 APE_1239a IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 APE_1239a IPR021127 CRISPR associated protein Cas2 APE_1240.1 IPR002729 CRISPR-associated protein Cas1 APE_1241.1 IPR009260 Protein of unknown function DUF911, endonuclease-like APE_1244.1 IPR022742 Putative lysophospholipase APE_1244.1 IPR029058 Alpha/Beta hydrolase fold APE_1245.1 IPR011032 GroES (chaperonin 10)-like APE_1245.1 IPR013149 Alcohol dehydrogenase, C-terminal APE_1245.1 IPR013154 Alcohol dehydrogenase GroES-like APE_1245.1 IPR036291 APE_1245.1 APE_1253 IPR003439 ABC transporter-like APE_1253 IPR003593 AAA+ ATPase domain APE_1253 IPR017871 ABC transporter, conserved site APE_1253 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1255.1 IPR003439 ABC transporter-like APE_1255.1 IPR003593 AAA+ ATPase domain APE_1255.1 IPR017871 ABC transporter, conserved site APE_1255.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1258.1 IPR012312 Haemerythrin/HHE cation-binding motif APE_1260 IPR001279 Beta-lactamase-like APE_1260 IPR036866 APE_1260 APE_1262 IPR002524 Cation efflux protein APE_1262 IPR027469 Cation efflux protein transmembrane domain APE_1265.1 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APE_1265.1 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APE_1265.1 IPR036291 APE_1265.1 APE_1267.1 IPR006076 FAD dependent oxidoreductase APE_1267.1 IPR036188 APE_1267.1 APE_1270.1 IPR002934 Nucleotidyl transferase domain APE_1272.1 IPR007842 HEPN APE_1273.1 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal APE_1273.1 IPR007229 Nicotinate phosphoribosyltransferase family APE_1273.1 IPR013785 Aldolase-type TIM barrel APE_1273.1 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal APE_1273.1 IPR036068 APE_1273.1 APE_1273.1 IPR037128 APE_1273.1 APE_1275 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase APE_1275 IPR011166 Beta-eliminating lyase family APE_1275 IPR013440 Tryptophanase APE_1275 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_1275 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_1275 IPR015424 Pyridoxal phosphate-dependent transferase APE_1275 IPR018176 Tryptophanase, conserved site APE_1275b IPR029052 Metallo-dependent phosphatase-like APE_1279.1 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal APE_1279.1 IPR024072 Dihydrofolate reductase-like domain APE_1281 IPR003607 HD/PDEase domain APE_1285.1 IPR000286 Histone deacetylase superfamily APE_1285.1 IPR023696 Ureohydrolase domain APE_1285.1 IPR023801 Histone deacetylase domain APE_1285.1 IPR037138 APE_1285.1 APE_1288.1 IPR006468 Nitrate reductase, alpha subunit APE_1288.1 IPR006656 Molybdopterin oxidoreductase APE_1288.1 IPR006657 Molydopterin dinucleotide-binding domain APE_1288.1 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain APE_1288.1 IPR009010 Aspartate decarboxylase-like domain APE_1288.1 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APE_1288.1 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site APE_1294.1 IPR006547 Nitrate reductase, beta subunit APE_1294.1 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_1294.1 IPR029263 Respiratory nitrate reductase beta, C-terminal APE_1294.1 IPR038262 APE_1294.1 APE_1297 IPR017838 DMSO reductase family, type II, haem b-binding subunit APE_1297 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain APE_1300.1 IPR003765 Nitrate reductase chaperone, NarJ APE_1300.1 IPR020945 DMSO/Nitrate reductase chaperone APE_1300.1 IPR036411 APE_1300.1 APE_1301.1 IPR003439 ABC transporter-like APE_1301.1 IPR003593 AAA+ ATPase domain APE_1301.1 IPR017871 ABC transporter, conserved site APE_1301.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1303.1 IPR028081 Leucine-binding protein domain APE_1303.1 IPR028082 Periplasmic binding protein-like I APE_1304.1 IPR001851 ABC transporter, permease APE_1305 IPR001851 ABC transporter, permease APE_1307 IPR000873 AMP-dependent synthetase/ligase APE_1307 IPR020845 AMP-binding, conserved site APE_1308 IPR003439 ABC transporter-like APE_1308 IPR003593 AAA+ ATPase domain APE_1308 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1308 IPR032823 APE_1308 APE_1310 IPR000873 AMP-dependent synthetase/ligase APE_1310 IPR025110 AMP-binding enzyme C-terminal domain APE_1313.1 IPR025403 Domain of unknown function DUF4129 APE_1317 IPR003593 AAA+ ATPase domain APE_1317 IPR011703 ATPase, AAA-3 APE_1317 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1319.1 IPR002881 Domain of unknown function DUF58 APE_1323.1 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type APE_1323.1 IPR012340 Nucleic acid-binding, OB-fold APE_1324 IPR000182 GNAT domain APE_1324 IPR016181 Acyl-CoA N-acyltransferase APE_1326.1 IPR013785 Aldolase-type TIM barrel APE_1328.1 IPR002821 Hydantoinase/oxoprolinase APE_1328.1 IPR008040 Hydantoinaseoxoprolinase, N-terminal APE_1331 IPR003692 Hydantoinase B/oxoprolinase APE_1333 IPR007138 Antibiotic biosynthesis monooxygenase-like domain APE_1333 IPR011008 Dimeric alpha-beta barrel APE_1335.1 IPR008007 Peptidase M42 APE_1335.1 IPR023367 Peptidase M42, domain 2 APE_1336.1 IPR002937 Amine oxidase APE_1336.1 IPR036188 APE_1336.1 APE_1340.1 IPR001650 Helicase, C-terminal APE_1340.1 IPR003593 AAA+ ATPase domain APE_1340.1 IPR003601 DNA topoisomerase, type IA, domain 2 APE_1340.1 IPR003602 DNA topoisomerase, type IA, DNA-binding domain APE_1340.1 IPR005736 Reverse gyrase APE_1340.1 IPR006171 Toprim domain APE_1340.1 IPR011545 DEAD/DEAH box helicase domain APE_1340.1 IPR013497 DNA topoisomerase, type IA, central APE_1340.1 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APE_1340.1 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 APE_1340.1 IPR014001 Helicase, superfamily 1/2, ATP-binding domain APE_1340.1 IPR023405 DNA topoisomerase, type IA, core domain APE_1340.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1343 IPR003010 Carbon-nitrogen hydrolase APE_1343 IPR036526 APE_1343 APE_1345 IPR000620 Drug/metabolite transporter APE_1346.1 IPR000873 AMP-dependent synthetase/ligase APE_1346.1 IPR020845 AMP-binding, conserved site APE_1346.1 IPR025110 AMP-binding enzyme C-terminal domain APE_1346.1 IPR032387 APE_1346.1 APE_1350.1 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain APE_1350.1 IPR023045 Molybdenum cofactor biosynthesis C APE_1350.1 IPR023047 Probable cyclic pyranopterin monophosphate synthase accessory protein, archaea APE_1350.1 IPR036522 APE_1350.1 APE_1353.1 IPR001650 Helicase, C-terminal APE_1353.1 IPR011545 DEAD/DEAH box helicase domain APE_1353.1 IPR014001 Helicase, superfamily 1/2, ATP-binding domain APE_1353.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1360.1 IPR005149 Transcription regulator PadR N-terminal APE_1360.1 IPR036388 APE_1360.1 APE_1360.1 IPR036390 APE_1360.1 APE_1361.1 IPR036291 APE_1361.1 APE_1363.1 IPR007364 SAM-dependent RNA methyltransferase, predicted APE_1365.1 IPR007839 GTP cyclohydrolase III APE_1365.1 IPR029787 Nucleotide cyclase APE_1366.1 IPR002180 6,7-dimethyl-8-ribityllumazine synthase APE_1366.1 IPR034964 APE_1366.1 APE_1366.1 IPR036467 APE_1366.1 APE_1367 IPR003338 CDC48, N-terminal subdomain APE_1367 IPR003593 AAA+ ATPase domain APE_1367 IPR003959 ATPase, AAA-type, core APE_1367 IPR003960 ATPase, AAA-type, conserved site APE_1367 IPR004201 CDC48, domain 2 APE_1367 IPR005938 AAA ATPase, CDC48 family APE_1367 IPR009010 Aspartate decarboxylase-like domain APE_1367 IPR015415 Vps4 oligomerisation, C-terminal APE_1367 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1367 IPR029067 CDC48 domain 2-like APE_1373 IPR003416 MgtC/SapB/SrpB transporter APE_1373 IPR025105 Domain of unknown function DUF4010 APE_1376.1 IPR003593 AAA+ ATPase domain APE_1376.1 IPR003601 DNA topoisomerase, type IA, domain 2 APE_1376.1 IPR003602 DNA topoisomerase, type IA, DNA-binding domain APE_1376.1 IPR005736 Reverse gyrase APE_1376.1 IPR006171 Toprim domain APE_1376.1 IPR011545 DEAD/DEAH box helicase domain APE_1376.1 IPR013497 DNA topoisomerase, type IA, central APE_1376.1 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APE_1376.1 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 APE_1376.1 IPR014001 Helicase, superfamily 1/2, ATP-binding domain APE_1376.1 IPR023405 DNA topoisomerase, type IA, core domain APE_1376.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1380.1 IPR003439 ABC transporter-like APE_1380.1 IPR003593 AAA+ ATPase domain APE_1380.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1382 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin APE_1382 IPR038271 APE_1382 APE_1385 IPR001441 Decaprenyl diphosphate synthase-like APE_1385 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site APE_1385 IPR036424 APE_1385 APE_1386.1 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase APE_1386.1 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal APE_1386.1 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain APE_1386.1 IPR014362 Glutamate dehydrogenase APE_1386.1 IPR033524 APE_1386.1 APE_1386.1 IPR036291 APE_1386.1 APE_1388.1 IPR010430 Protein of unknown function DUF1028 APE_1388.1 IPR014927 Putative peptidoglycan binding APE_1388.1 IPR029055 Nucleophile aminohydrolases, N-terminal APE_1390.1 IPR000914 Bacterial extracellular solute-binding protein, family 5 APE_1390.1 IPR018247 EF-Hand 1, calcium-binding site APE_1395.1 IPR000515 MetI-like domain APE_1395.1 IPR035906 APE_1395.1 APE_1396 IPR000515 MetI-like domain APE_1396 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APE_1396 IPR035906 APE_1396 APE_1399 IPR003439 ABC transporter-like APE_1399 IPR003593 AAA+ ATPase domain APE_1399 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_1399 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1402.1 IPR003439 ABC transporter-like APE_1402.1 IPR003593 AAA+ ATPase domain APE_1402.1 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_1402.1 IPR017871 ABC transporter, conserved site APE_1402.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1404.1 IPR001986 Enolpyruvate transferase domain APE_1404.1 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase APE_1404.1 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta APE_1404.1 IPR036968 APE_1404.1 APE_1407.1 IPR024064 FdhE-like APE_1410.1 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase APE_1411.1 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal APE_1411.1 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase APE_1415 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase APE_1415 IPR003918 NADH:ubiquinone oxidoreductase APE_1417.1 IPR039428 APE_1417.1 APE_1418.1 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 APE_1419.1 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_1419.1 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_1421.1 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H APE_1422 IPR001135 NADH-quinone oxidoreductase, subunit D APE_1422 IPR029014 NiFe hydrogenase-like APE_1422 IPR038290 APE_1422 APE_1426 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit APE_1426 IPR037232 APE_1426 APE_1428.1 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit APE_1428.1 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit APE_1432 IPR000640 Translation elongation factor EFG, V domain APE_1432 IPR000795 Elongation factor, GTP-binding domain APE_1432 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 APE_1432 IPR004543 Translation elongation factor EFG/EF2, archaeal APE_1432 IPR005225 Small GTP-binding protein domain APE_1432 IPR005517 Translation elongation factor EFG/EF2, domain IV APE_1432 IPR009000 Translation protein, beta-barrel domain APE_1432 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_1432 IPR020568 Ribosomal protein S5 domain 2-type fold APE_1432 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1432 IPR031157 APE_1432 APE_1432 IPR035647 APE_1432 APE_1436.1 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 APE_1436.1 IPR006166 ERCC4 domain APE_1436.1 IPR010994 RuvA domain 2-like APE_1436.1 IPR011335 Restriction endonuclease type II-like APE_1437.1 IPR001667 DDH domain APE_1437.1 IPR003156 DHHA1 domain APE_1437.1 IPR038763 APE_1437.1 APE_1440 IPR002777 Prefoldin beta-like APE_1440 IPR009053 Prefoldin APE_1440 IPR012713 Prefoldin, beta subunit APE_1440a IPR015419 EKC/KEOPS complex, subunit Pcc1 APE_1441.1 IPR006685 Mechanosensitive ion channel MscS APE_1441.1 IPR010920 Like-Sm (LSM) domain APE_1441.1 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 APE_1441.1 IPR011066 Mechanosensitive ion channel MscS, C-terminal APE_1441.1 IPR023408 APE_1441.1 APE_1442 IPR007366 Protein of unknown function DUF432 APE_1443.1 IPR007109 Brix domain APE_1443.1 IPR023548 Probable Brix domain-containing ribosomal biogenesis protein APE_1443a IPR002674 Ribosomal protein L37ae APE_1443a IPR011331 Ribosomal protein L37ae/L37e APE_1443a IPR011332 Zinc-binding ribosomal protein APE_1445 IPR001247 Exoribonuclease, phosphorolytic domain 1 APE_1445 IPR015847 Exoribonuclease, phosphorolytic domain 2 APE_1445 IPR020568 Ribosomal protein S5 domain 2-type fold APE_1445 IPR020869 Exosome complex exonuclease 2, probable APE_1445 IPR027408 PNPase/RNase PH domain APE_1445 IPR036345 APE_1445 APE_1447 IPR001247 Exoribonuclease, phosphorolytic domain 1 APE_1447 IPR011807 Exoribonuclease, exosome complex APE_1447 IPR015847 Exoribonuclease, phosphorolytic domain 2 APE_1447 IPR020568 Ribosomal protein S5 domain 2-type fold APE_1447 IPR027408 PNPase/RNase PH domain APE_1447 IPR036345 APE_1447 APE_1448 IPR004087 K Homology domain APE_1448 IPR004088 K Homology domain, type 1 APE_1448 IPR012340 Nucleic acid-binding, OB-fold APE_1448 IPR022967 RNA-binding domain, S1 APE_1448 IPR023474 Probable exosome complex RNA-binding protein 1 APE_1448 IPR036612 APE_1448 APE_1449 IPR000426 Proteasome alpha-subunit, N-terminal domain APE_1449 IPR001353 Proteasome, subunit alpha/beta APE_1449 IPR019982 Proteasome alpha subunit, archaeal APE_1449 IPR029055 Nucleophile aminohydrolases, N-terminal APE_1450.1 IPR002738 RNase P subunit p30 APE_1450.1 IPR016195 Polymerase/histidinol phosphatase-like APE_1450.1 IPR023539 Ribonuclease P, protein component 3, archaeal APE_1451.1 IPR002739 Uncharacterised protein family UPF0201 APE_1451.1 IPR022803 Ribosomal protein L5 domain APE_1452 IPR000439 Ribosomal protein L15e APE_1452 IPR012678 Ribosomal protein L23/L15e core domain APE_1452 IPR020925 Ribosomal protein L15e, conserved site APE_1452 IPR020926 Ribosomal protein L15e, archaeal APE_1452 IPR024794 Ribosomal protein L15e core domain APE_1454.1 IPR001757 Cation-transporting P-type ATPase APE_1454.1 IPR006121 Heavy metal-associated domain, HMA APE_1454.1 IPR008250 P-type ATPase, A domain APE_1454.1 IPR018303 P-type ATPase, phosphorylation site APE_1454.1 IPR023214 HAD-like domain APE_1454.1 IPR023298 P-type ATPase, transmembrane domain APE_1454.1 IPR023299 P-type ATPase, cytoplasmic domain N APE_1454.1 IPR027256 Cation-transporting P-type ATPase, subfamily IB APE_1454.1 IPR036163 APE_1454.1 APE_1454.1 IPR036412 APE_1454.1 APE_1457 IPR008331 Ferritin/DPS protein domain APE_1457 IPR009078 Ferritin-like superfamily APE_1457 IPR012347 Ferritin-related APE_1457 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold APE_1458 IPR001100 APE_1458 APE_1458 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APE_1458 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site APE_1458 IPR016156 FAD/NAD-linked reductase, dimerisation domain APE_1458 IPR021179 Mercury reductase, MerA APE_1458 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain APE_1458 IPR036188 APE_1458 APE_1458a IPR000485 AsnC-type HTH domain APE_1458a IPR011008 Dimeric alpha-beta barrel APE_1458a IPR019887 Transcription regulator AsnC-type, C-terminal APE_1458a IPR019888 Transcription regulator AsnC-type APE_1458a IPR036388 APE_1458a APE_1458a IPR036390 APE_1458a APE_1461.1 IPR001048 Aspartate/glutamate/uridylate kinase APE_1461.1 IPR004662 Acetylglutamate kinase APE_1461.1 IPR036393 APE_1461.1 APE_1461.1 IPR037529 APE_1461.1 APE_1462 IPR000534 Semialdehyde dehydrogenase, NAD-binding APE_1462 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 APE_1462 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site APE_1462 IPR036291 APE_1462 APE_1462 IPR037535 APE_1462 APE_1463 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX APE_1463 IPR011870 Lysine biosynthesis enzyme LysX APE_1463 IPR013651 ATP-grasp fold, RimK-type APE_1463 IPR013815 ATP-grasp fold, subdomain 1 APE_1463 IPR016185 Pre-ATP-grasp domain APE_1464 IPR005814 Aminotransferase class-III APE_1464 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_1464 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_1464 IPR015424 Pyridoxal phosphate-dependent transferase APE_1464 IPR037537 APE_1464 APE_1467.1 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site APE_1467.1 IPR002933 Peptidase M20 APE_1467.1 IPR010175 Acetyl-ornithine/Acetyl-lysine deacetylase APE_1467.1 IPR011650 Peptidase M20, dimerisation domain APE_1467.1 IPR036264 APE_1467.1 APE_1470.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1470.1 IPR018317 Queuosine biosynthesis protein QueC APE_1471.1 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF APE_1472 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APE_1472 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate APE_1472 IPR029061 Thiamin diphosphate-binding fold APE_1472 IPR032686 APE_1472 APE_1473.1 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain APE_1473.1 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal APE_1473.1 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II APE_1473.1 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain APE_1473.1 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit APE_1473.1 IPR029061 Thiamin diphosphate-binding fold APE_1473.1 IPR033412 APE_1473.1 APE_1477 IPR005642 Protein of unknown function DUF340, prokaryotic membrane APE_1478.1 IPR005240 Protein of unknown function DUF389 APE_1481.1 IPR000086 NUDIX hydrolase domain APE_1481.1 IPR015797 NUDIX hydrolase domain-like APE_1481.1 IPR020084 NUDIX hydrolase, conserved site APE_1481.1 IPR020476 NUDIX hydrolase APE_1483.1 IPR007508 D-aminoacyl-tRNA deacylase APE_1483.1 IPR018033 D-Tyr-tRNATyr deacylase APE_1484.1 IPR001753 Crotonase superfamily APE_1484.1 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal APE_1484.1 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding APE_1484.1 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like APE_1484.1 IPR013328 Dehydrogenase, multihelical APE_1484.1 IPR014748 Crontonase, C-terminal APE_1484.1 IPR029045 ClpP/crotonase-like domain APE_1484.1 IPR036291 APE_1484.1 APE_1488.1 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site APE_1488.1 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_1488.1 IPR036052 APE_1488.1 APE_1491.1 IPR036291 APE_1491.1 APE_1493 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase APE_1493 IPR036108 APE_1493 APE_1495.1 IPR023210 NADP-dependent oxidoreductase domain APE_1495.1 IPR036812 APE_1495.1 APE_1495a IPR002145 Ribbon-helix-helix protein, copG APE_1495a IPR010985 Ribbon-helix-helix APE_1495a IPR013321 Arc-type ribbon-helix-helix APE_1497.1 IPR036390 APE_1497.1 APE_1498.1 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_1498.1 IPR005789 Threonine dehydratase, catabolic APE_1498.1 IPR036052 APE_1498.1 APE_1501.1 IPR006056 Enamine/imine deaminase YjgF-like APE_1501.1 IPR006175 YjgF/Yer057p/UK114 family APE_1501.1 IPR035959 APE_1501.1 APE_1503.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_1505.1 IPR014774 Circadian clock protein KaiC/DNA repair protein RadA APE_1505.1 IPR022475 Uncharacterised protein family UPF0273, KiaC-like APE_1505.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1507.1 IPR001093 IMP dehydrogenase/GMP reductase APE_1507.1 IPR005990 Inosine-5'-monophosphate dehydrogenase APE_1507.1 IPR013785 Aldolase-type TIM barrel APE_1509.1 IPR005175 Domain of unknown function DUF296 APE_1510.1 IPR000644 CBS domain APE_1512 IPR004422 GHMP kinase group 1 APE_1512 IPR013750 GHMP kinase, C-terminal domain APE_1512 IPR020568 Ribosomal protein S5 domain 2-type fold APE_1514.1 IPR025877 MobA-like NTP transferase domain APE_1514.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_1516.1 IPR000462 CDP-alcohol phosphatidyltransferase APE_1517 IPR002587 Myo-inositol-1-phosphate synthase APE_1517 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like APE_1517 IPR036291 APE_1517 APE_1517a IPR029227 Plant antimicrobial peptide APE_1520.1 IPR001602 Uncharacterised protein family UPF0047 APE_1520.1 IPR035917 APE_1520.1 APE_1522.1 IPR003593 AAA+ ATPase domain APE_1522.1 IPR003959 ATPase, AAA-type, core APE_1522.1 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal APE_1522.1 IPR013748 Replication factor C, C-terminal domain APE_1522.1 IPR023748 Replication factor C small subunit, archaeal APE_1522.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1524.1 IPR003593 AAA+ ATPase domain APE_1524.1 IPR003959 ATPase, AAA-type, core APE_1524.1 IPR023935 Replication factor C, large subunit APE_1524.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1526.1 IPR000462 CDP-alcohol phosphatidyltransferase APE_1529.1 IPR007014 FUN14 APE_1530.1 IPR002792 TRAM domain APE_1530.1 IPR005839 Methylthiotransferase APE_1530.1 IPR006466 MiaB-like tRNA modifying enzyme, archaeal-type APE_1530.1 IPR006638 Elongator protein 3/MiaB/NifB APE_1530.1 IPR007197 Radical SAM APE_1530.1 IPR013848 Methylthiotransferase, N-terminal APE_1530.1 IPR023404 Radical SAM, alpha/beta horseshoe APE_1530.1 IPR038135 APE_1530.1 APE_1533.1 IPR002735 Translation initiation factor IF2/IF5 APE_1533.1 IPR004458 Translation initiation factor 2, beta subunit APE_1533.1 IPR016189 Translation initiation factor IF2/IF5, N-terminal APE_1533.1 IPR016190 Translation initiation factor IF2/IF5, zinc-binding APE_1534 IPR016181 Acyl-CoA N-acyltransferase APE_1535.1 IPR007197 Radical SAM APE_1535.1 IPR013785 Aldolase-type TIM barrel APE_1535.1 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted APE_1538.1 IPR000652 Triosephosphate isomerase APE_1538.1 IPR013785 Aldolase-type TIM barrel APE_1538.1 IPR020861 Triosephosphate isomerase, active site APE_1538.1 IPR022891 Triosephosphate isomerase, archaeal APE_1538.1 IPR033983 APE_1538.1 APE_1538.1 IPR035990 APE_1538.1 APE_1543 IPR000182 GNAT domain APE_1543 IPR007807 Helicase domain APE_1543 IPR016181 Acyl-CoA N-acyltransferase APE_1543 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA APE_1543 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1545.1 IPR010397 Protein of unknown function DUF996 APE_1547.1 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain APE_1547.1 IPR029058 Alpha/Beta hydrolase fold APE_1548.1 IPR003439 ABC transporter-like APE_1548.1 IPR003593 AAA+ ATPase domain APE_1548.1 IPR017871 ABC transporter, conserved site APE_1548.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1552 IPR000644 CBS domain APE_1552 IPR001807 Chloride channel, voltage gated APE_1552 IPR014743 Chloride channel, core APE_1555.1 IPR001807 Chloride channel, voltage gated APE_1555.1 IPR014743 Chloride channel, core APE_1557.1 IPR011032 GroES (chaperonin 10)-like APE_1557.1 IPR013149 Alcohol dehydrogenase, C-terminal APE_1557.1 IPR013154 Alcohol dehydrogenase GroES-like APE_1557.1 IPR020843 Polyketide synthase, enoylreductase APE_1557.1 IPR036291 APE_1557.1 APE_1558 IPR025745 Restriction system protein Mrr-like N-terminal domain APE_1558b IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APE_1558b IPR035093 APE_1558b APE_1559.1 IPR001279 Beta-lactamase-like APE_1559.1 IPR036866 APE_1559.1 APE_1559a IPR018967 Iron sulphur-containing domain, CDGSH-type APE_1561 IPR012372 Uncharacterised conserved protein UCP014405, metallopeptidase Zn-binding site APE_1564.1 IPR014856 Uncharacterised protein family UPF0278 APE_1564.1 IPR029060 PIN domain-like APE_1567.1 IPR001072 Uncharacterised protein family MJ0414 APE_1567.1 IPR021122 RNA ligase domain, REL/Rln2 APE_1568.1 IPR027396 DsrEFH-like APE_1570 IPR000537 UbiA prenyltransferase family APE_1570 IPR006371 4-hydroxybenzoate polyprenyltransferase-related APE_1571.1 IPR002830 UbiD decarboxylyase family APE_1576 IPR003439 ABC transporter-like APE_1576 IPR003593 AAA+ ATPase domain APE_1576 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_1576 IPR017871 ABC transporter, conserved site APE_1576 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1578 IPR003439 ABC transporter-like APE_1578 IPR003593 AAA+ ATPase domain APE_1578 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_1578 IPR017871 ABC transporter, conserved site APE_1578 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1581.1 IPR000515 MetI-like domain APE_1581.1 IPR035906 APE_1581.1 APE_1582 IPR000515 MetI-like domain APE_1582 IPR035906 APE_1582 APE_1583.1 IPR000914 Bacterial extracellular solute-binding protein, family 5 APE_1586 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site APE_1586 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_1586 IPR036052 APE_1586 APE_1586a IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_1586a IPR036250 APE_1586a APE_1586b IPR036250 APE_1586b APE_1588 IPR002716 PIN domain APE_1588 IPR029060 PIN domain-like APE_1588a IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding APE_1588a IPR013815 ATP-grasp fold, subdomain 1 APE_1588b IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding APE_1591.1 IPR001792 Acylphosphatase-like domain APE_1591.1 IPR017968 Acylphosphatase, conserved site APE_1591.1 IPR036046 APE_1591.1 APE_1592.1 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding APE_1592.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1592.1 IPR015803 Cysteine-tRNA ligase APE_1592.1 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase APE_1592.1 IPR032678 APE_1592.1 APE_1594 IPR000594 UBA/THIF-type NAD/FAD binding fold APE_1594 IPR035985 APE_1594 APE_1596 IPR002795 S-adenosylmethionine synthetase, archaea APE_1596 IPR027790 S-adenosylmethionine synthase APE_1599.1 IPR007408 Protein of unknown function DUF460 APE_1602.1 IPR000687 RIO kinase APE_1602.1 IPR011009 Protein kinase-like domain APE_1602.1 IPR015285 RIO2 kinase, winged helix, N-terminal APE_1602.1 IPR018935 RIO kinase, conserved site APE_1602.1 IPR036388 APE_1602.1 APE_1602.1 IPR036390 APE_1602.1 APE_1602a IPR001845 HTH ArsR-type DNA-binding domain APE_1602a IPR036388 APE_1602a APE_1602a IPR036390 APE_1602a APE_1604 IPR004468 CTP synthase APE_1604 IPR017456 CTP synthase, N-terminal APE_1604 IPR017926 Glutamine amidotransferase APE_1604 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1604 IPR029062 Class I glutamine amidotransferase-like APE_1605.1 IPR006357 HAD-superfamily hydrolase, subfamily IIA APE_1605.1 IPR023214 HAD-like domain APE_1605.1 IPR036412 APE_1605.1 APE_1611 IPR008532 Domain of unknown function DUF814 APE_1614 IPR034904 APE_1614 APE_1615 IPR002524 Cation efflux protein APE_1615 IPR027469 Cation efflux protein transmembrane domain APE_1616.1 IPR004456 Bisphosphoglycerate-independent phosphoglycerate mutase APE_1616.1 IPR006124 Metalloenzyme APE_1616.1 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha APE_1616.1 IPR017850 Alkaline-phosphatase-like, core domain APE_1616.1 IPR023665 2,3-bisphosphoglycerate-independent phosphoglycerate mutase APE_1618.1 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel APE_1618.1 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha APE_1618.1 IPR006249 Aconitate/iron regulatory protein 2 APE_1618.1 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APE_1618.1 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 APE_1618.1 IPR018136 Aconitase family, 4Fe-4S cluster binding site APE_1618.1 IPR036008 APE_1618.1 APE_1622.1 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain APE_1622.1 IPR036188 APE_1622.1 APE_1623 IPR000883 Cytochrome c oxidase subunit I APE_1623 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site APE_1623 IPR036927 APE_1623 APE_1627 IPR008304 Uncharacterised conserved protein UCP017998 APE_1627 IPR016181 Acyl-CoA N-acyltransferase APE_1629 IPR001950 Translation initiation factor SUI1 APE_1629 IPR005872 Archaeal/bacterial translation initiation factor SUI1 APE_1629 IPR022851 Translation factor SUI1 homolog, archaea APE_1629 IPR036877 APE_1629 APE_1629a.1 IPR029040 RNA polymerase subunit RPABC4/transcription elongation factor Spt4 APE_1630.1 IPR006059 Bacterial extracellular solute-binding, family 1 APE_1632 IPR035906 APE_1632 APE_1633 IPR000515 MetI-like domain APE_1633 IPR035906 APE_1633 APE_1635.1 IPR003439 ABC transporter-like APE_1635.1 IPR003593 AAA+ ATPase domain APE_1635.1 IPR008995 Molybdate/tungstate binding, C-terminal APE_1635.1 IPR013611 Transport-associated OB, type 2 APE_1635.1 IPR017871 ABC transporter, conserved site APE_1635.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1637.1 IPR005925 Agmatinase-related APE_1637.1 IPR006035 Ureohydrolase APE_1637.1 IPR020855 Ureohydrolase, manganese-binding site APE_1637.1 IPR023696 Ureohydrolase domain APE_1639 IPR002315 Glycyl-tRNA synthetase APE_1639 IPR004154 Anticodon-binding APE_1639 IPR022960 Glycine-tRNA ligase, archaeal APE_1639 IPR036621 APE_1639 APE_1646.1 IPR006676 tRNA-splicing endonuclease APE_1646.1 IPR006677 tRNA intron endonuclease, catalytic domain-like APE_1646.1 IPR006678 tRNA intron endonuclease, N-terminal APE_1646.1 IPR011856 tRNA endonuclease-like domain APE_1646.1 IPR016442 tRNA-splicing endonuclease, archaeal short subfamily APE_1646.1 IPR036167 APE_1646.1 APE_1646.1 IPR036740 APE_1646.1 APE_1647 IPR003382 Flavoprotein APE_1647 IPR004507 Decarboxylase UbiX/Pad1 APE_1647 IPR036551 APE_1647 APE_1648.1 IPR002589 Macro domain APE_1649.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1649.1 IPR032319 APE_1649.1 APE_1652 IPR006638 Elongator protein 3/MiaB/NifB APE_1652 IPR007197 Radical SAM APE_1652 IPR013785 Aldolase-type TIM barrel APE_1652 IPR017200 Radical SAM coenzyme PQQ biosynthesis protein E/heme D1 biosynthesis NirJ APE_1652 IPR023885 4Fe4S-binding SPASM domain APE_1655 IPR006638 Elongator protein 3/MiaB/NifB APE_1655 IPR007197 Radical SAM APE_1655 IPR013785 Aldolase-type TIM barrel APE_1655 IPR017200 Radical SAM coenzyme PQQ biosynthesis protein E/heme D1 biosynthesis NirJ APE_1655 IPR023885 4Fe4S-binding SPASM domain APE_1655 IPR027634 Radical SAM protein, BA_1875 family APE_1657.1 IPR001303 Class II aldolase/adducin N-terminal APE_1657.1 IPR036409 APE_1657.1 APE_1659 IPR023210 NADP-dependent oxidoreductase domain APE_1659 IPR036812 APE_1659 APE_1660.1 IPR003781 CoA-binding APE_1660.1 IPR036291 APE_1660.1 APE_1661 IPR002833 Peptidyl-tRNA hydrolase, PTH2 APE_1661 IPR023476 Peptidyl-tRNA hydrolase II domain APE_1661 IPR034759 APE_1661 APE_1662.1 IPR002801 Aspartate transcarbamylase regulatory subunit APE_1662.1 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal APE_1662.1 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APE_1662.1 IPR036792 APE_1662.1 APE_1662.1 IPR036793 APE_1662.1 APE_1663.1 IPR002082 Aspartate carbamoyltransferase APE_1663.1 IPR006130 Aspartate/ornithine carbamoyltransferase APE_1663.1 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain APE_1663.1 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding APE_1663.1 IPR036901 APE_1663.1 APE_1666 IPR003607 HD/PDEase domain APE_1666 IPR006674 HD domain APE_1668 IPR004323 Divalent ion tolerance protein, CutA APE_1668 IPR011322 Nitrogen regulatory PII-like, alpha/beta APE_1668 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APE_1669.1 IPR001100 APE_1669.1 APE_1669.1 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APE_1669.1 IPR006258 Dihydrolipoamide dehydrogenase APE_1669.1 IPR016156 FAD/NAD-linked reductase, dimerisation domain APE_1669.1 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain APE_1669.1 IPR036188 APE_1669.1 APE_1671 IPR000089 Biotin/lipoyl attachment APE_1671 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain APE_1671 IPR004167 E3 binding APE_1671 IPR011053 Single hybrid motif APE_1671 IPR023213 Chloramphenicol acetyltransferase-like domain APE_1671 IPR036625 APE_1671 APE_1674 IPR005475 Transketolase-like, pyrimidine-binding domain APE_1674 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II APE_1674 IPR029061 Thiamin diphosphate-binding fold APE_1674 IPR033248 APE_1674 APE_1677.1 IPR001017 Dehydrogenase, E1 component APE_1677.1 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha APE_1677.1 IPR029061 Thiamin diphosphate-binding fold APE_1681.1 IPR006089 Acyl-CoA dehydrogenase, conserved site APE_1681.1 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APE_1681.1 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_1681.1 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain APE_1681.1 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APE_1681.1 IPR036250 APE_1681.1 APE_1681.1 IPR037069 APE_1681.1 APE_1683.1 IPR005129 ArgK protein APE_1683.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1686.1 IPR006158 Cobalamin (vitamin B12)-binding domain APE_1686.1 IPR006159 Methylmalonyl-CoA mutase, C-terminal APE_1686.1 IPR036724 APE_1686.1 APE_1687 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic APE_1687 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic APE_1687 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic APE_1688.1 IPR002491 ABC transporter periplasmic binding domain APE_1689 IPR016618 Uncharacterised conserved protein UCP014422 APE_1690.1 IPR005500 Protein of unknown function DUF309 APE_1690.1 IPR023203 TTHA0068-like domain APE_1691 IPR003689 Zinc/iron permease APE_1692.1 IPR008162 Inorganic pyrophosphatase APE_1692.1 IPR036649 APE_1692.1 APE_1694.1 IPR003780 COX15/CtaA family APE_1695.1 IPR006222 Glycine cleavage T-protein, N-terminal APE_1695.1 IPR006223 Glycine cleavage system T protein APE_1695.1 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain APE_1695.1 IPR022903 Glycine cleavage system T protein, bacteria APE_1695.1 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 APE_1695.1 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA APE_1695.1 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain APE_1699 IPR018747 Protein of unknown function DUF2299 APE_1702 IPR003439 ABC transporter-like APE_1702 IPR003593 AAA+ ATPase domain APE_1702 IPR010230 FeS cluster assembly SUF system, ATPase SufC APE_1702 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1703 IPR000825 SUF system FeS cluster assembly, SufBD APE_1703 IPR010231 SUF system FeS cluster assembly, SufB APE_1703 IPR037284 APE_1703 APE_1706 IPR000825 SUF system FeS cluster assembly, SufBD APE_1706 IPR037284 APE_1706 APE_1711 IPR000485 AsnC-type HTH domain APE_1711 IPR036388 APE_1711 APE_1711 IPR036390 APE_1711 APE_1713 IPR002020 Citrate synthase-like APE_1713 IPR016142 Citrate synthase-like, large alpha subdomain APE_1713 IPR016143 Citrate synthase-like, small alpha subdomain APE_1713 IPR019810 Citrate synthase active site APE_1713 IPR024176 Citrate synthase, bacterial-type APE_1713 IPR036969 APE_1713 APE_1715.1 IPR002736 Triphosphoribosyl-dephospho-CoA protein APE_1717.1 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit APE_1717.1 IPR020556 Amidase, conserved site APE_1717.1 IPR023631 Amidase signature domain APE_1717.1 IPR036928 APE_1717.1 APE_1718 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related APE_1718 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit APE_1718 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic APE_1718 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain APE_1718 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site APE_1718 IPR018027 Asn/Gln amidotransferase APE_1718 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal APE_1719.1 IPR036909 APE_1719.1 APE_1720 IPR001505 Copper centre Cu(A) APE_1720 IPR002429 Cytochrome c oxidase subunit II C-terminal APE_1720 IPR008972 Cupredoxin APE_1721 IPR036249 APE_1721 APE_1722 IPR013766 Thioredoxin domain APE_1722 IPR036249 APE_1722 APE_1722a IPR007410 DR1885-like metal-binding protein APE_1722a IPR036182 APE_1722a APE_1723.1 IPR002935 O-methyltransferase, family 3 APE_1723.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_1724.1 IPR017941 Rieske [2Fe-2S] iron-sulphur domain APE_1724.1 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APE_1724.1 IPR036922 APE_1724.1 APE_1725 IPR005797 Cytochrome b/b6, N-terminal APE_1725 IPR016174 Di-haem cytochrome, transmembrane APE_1725 IPR027387 Cytochrome b/b6-like domain APE_1725 IPR036150 APE_1725 APE_1727.1 IPR012932 Vitamin K epoxide reductase APE_1727.1 IPR038354 APE_1727.1 APE_1728 IPR006059 Bacterial extracellular solute-binding, family 1 APE_1730.1 IPR000515 MetI-like domain APE_1730.1 IPR035906 APE_1730.1 APE_1732 IPR003439 ABC transporter-like APE_1732 IPR003593 AAA+ ATPase domain APE_1732 IPR008995 Molybdate/tungstate binding, C-terminal APE_1732 IPR013611 Transport-associated OB, type 2 APE_1732 IPR017871 ABC transporter, conserved site APE_1732 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1734.1 IPR029028 Alpha/beta knot methyltransferases APE_1735 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain APE_1735 IPR003593 AAA+ ATPase domain APE_1735 IPR004125 Signal recognition particle, SRP54 subunit, M-domain APE_1735 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle APE_1735 IPR022941 Signal recognition particle, SRP54 subunit APE_1735 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1735 IPR036891 APE_1735 APE_1737.1 IPR001892 Ribosomal protein S13 APE_1737.1 IPR010979 Ribosomal protein S13-like, H2TH APE_1737.1 IPR018269 Ribosomal protein S13, conserved site APE_1737.1 IPR019977 Ribosomal protein S13, archaeal APE_1737.1 IPR027437 30s ribosomal protein S13, C-terminal APE_1739.1 IPR001912 Ribosomal protein S4/S9, N-terminal APE_1739.1 IPR002942 RNA-binding S4 domain APE_1739.1 IPR005710 Ribosomal protein S4/S9, eukaryotic/archaeal APE_1739.1 IPR018079 Ribosomal protein S4, conserved site APE_1739.1 IPR022802 Ribosomal protein S4, archaeal APE_1739.1 IPR036986 APE_1739.1 APE_1742.1 IPR001971 Ribosomal protein S11 APE_1742.1 IPR018102 Ribosomal S11, conserved site APE_1742.1 IPR019961 Ribosomal protein S11, archaeal APE_1742.1 IPR036967 APE_1742.1 APE_1744.1 IPR001514 DNA-directed RNA polymerase, 30-40kDa subunit, conserved site APE_1744.1 IPR011262 DNA-directed RNA polymerase, insert domain APE_1744.1 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type APE_1744.1 IPR022842 DNA-directed RNA polymerase subunit D (Rpo3) APE_1744.1 IPR036603 APE_1744.1 APE_1744.1 IPR036643 APE_1744.1 APE_1746 IPR001196 Ribosomal protein L15, conserved site APE_1746 IPR021131 Ribosomal protein L18e/L15P APE_1746 IPR021132 Ribosomal protein L18e, conserved site APE_1746 IPR022947 Ribosomal protein L18e, archaea APE_1746 IPR036227 APE_1746 APE_1747 IPR005755 Ribosomal protein L13, eukaryotic/archaeal APE_1747 IPR005822 Ribosomal protein L13 APE_1747 IPR023563 Ribosomal protein L13, conserved site APE_1747 IPR036899 APE_1747 APE_1749 IPR000754 Ribosomal protein S9 APE_1749 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_1749 IPR019958 Ribosomal protein S9, archaeal APE_1749 IPR020568 Ribosomal protein S5 domain 2-type fold APE_1749 IPR020574 Ribosomal protein S9, conserved site APE_1749a IPR000268 DNA-directed RNA polymerase, subunit N/Rpb10 APE_1749a IPR020789 RNA polymerases, subunit N, zinc binding site APE_1749a IPR023580 RNA polymerase subunit RPB10 APE_1750 IPR001865 Ribosomal protein S2 APE_1750 IPR005707 Ribosomal protein S2, eukaryotic/archaeal APE_1750 IPR018130 Ribosomal protein S2, conserved site APE_1750 IPR023454 Ribosomal protein S2, archaeal APE_1750 IPR023591 Ribosomal protein S2, flavodoxin-like domain APE_1751 IPR002739 Uncharacterised protein family UPF0201 APE_1751 IPR022803 Ribosomal protein L5 domain APE_1753.1 IPR022970 Nucleoside triphosphate hydrolase-related APE_1753.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1754.1 IPR000192 Aminotransferase class V domain APE_1754.1 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_1754.1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_1754.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_1756 IPR001278 Arginine-tRNA ligase APE_1756 IPR005148 Arginyl tRNA synthetase N-terminal domain APE_1756 IPR008909 DALR anticodon binding APE_1756 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding APE_1756 IPR035684 APE_1756 APE_1756 IPR036695 APE_1756 APE_1758.1 IPR001233 tRNA-splicing ligase, RtcB APE_1758.1 IPR036025 APE_1758.1 APE_1761.1 IPR008173 Adenylyl cyclase CyaB APE_1761.1 IPR023577 CYTH-like domain APE_1761.1 IPR033469 APE_1761.1 APE_1763 IPR019217 Protein of unknown function DUF2118 APE_1764.1 IPR000092 Polyprenyl synthetase APE_1764.1 IPR008949 Terpenoid synthase APE_1764.1 IPR033749 APE_1764.1 APE_1765.1 IPR000262 FMN-dependent dehydrogenase APE_1765.1 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent APE_1765.1 IPR013785 Aldolase-type TIM barrel APE_1768.1 IPR001048 Aspartate/glutamate/uridylate kinase APE_1768.1 IPR024192 Fosfomycin resistance kinase, FomA-type APE_1768.1 IPR036393 APE_1768.1 APE_1771 IPR002737 MEMO1 family APE_1773.1 IPR002528 Multi antimicrobial extrusion protein APE_1775.1 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase APE_1779.1 IPR015947 PUA-like domain APE_1782.1 IPR003000 Sirtuin family APE_1782.1 IPR026591 Sirtuin family, catalytic core small domain APE_1782.1 IPR027546 Sirtuin, class III APE_1782.1 IPR029035 DHS-like NAD/FAD-binding domain APE_1786.1 IPR015590 Aldehyde dehydrogenase domain APE_1786.1 IPR016161 Aldehyde/histidinol dehydrogenase APE_1786.1 IPR016162 Aldehyde dehydrogenase, N-terminal APE_1786.1 IPR016163 Aldehyde dehydrogenase, C-terminal APE_1790.1 IPR011009 Protein kinase-like domain APE_1791.1 IPR002934 Nucleotidyl transferase domain APE_1791.1 IPR008229 tRNA nucleotidyltransferase, archaea APE_1791.1 IPR011068 Nucleotidyltransferase, class I, C-terminal-like APE_1791.1 IPR015329 tRNA nucleotidyltransferase, substrate binding APE_1792 IPR004175 2',5' RNA ligase APE_1792 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase APE_1792 IPR014051 Phosphoesterase, HXTX APE_1794 IPR003601 DNA topoisomerase, type IA, domain 2 APE_1794 IPR003602 DNA topoisomerase, type IA, DNA-binding domain APE_1794 IPR005739 DNA topoisomerase I, archeal-type APE_1794 IPR006171 Toprim domain APE_1794 IPR013497 DNA topoisomerase, type IA, central APE_1794 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APE_1794 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APE_1794 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 APE_1794 IPR023405 DNA topoisomerase, type IA, core domain APE_1794 IPR023406 DNA topoisomerase, type IA, active site APE_1794 IPR028612 DNA topoisomerase I, type IA APE_1796.1 IPR001733 Peptidase S26B, eukaryotic signal peptidase APE_1796.1 IPR015927 Peptidase S24/S26A/S26B/S26C APE_1796.1 IPR036286 APE_1796.1 APE_1797 IPR005146 B3/B4 tRNA-binding domain APE_1797 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APE_1798.1 IPR000760 Inositol monophosphatase APE_1799a IPR011008 Dimeric alpha-beta barrel APE_1799a IPR019887 Transcription regulator AsnC-type, C-terminal APE_1800.1 IPR005140 eRF1 domain 1/Pelota-like APE_1800.1 IPR005142 eRF1 domain 3 APE_1800.1 IPR023521 Translation release factor pelota, archaea APE_1800.1 IPR029064 50S ribosomal protein L30e-like APE_1800.1 IPR038069 APE_1800.1 APE_1805.1 IPR002300 Aminoacyl-tRNA synthetase, class Ia APE_1805.1 IPR002303 Valine-tRNA ligase APE_1805.1 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain APE_1805.1 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding APE_1805.1 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APE_1805.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1808 IPR007404 Protein of unknown function DUF457 APE_1810 IPR019195 ABC transporter, ATPase, putative APE_1814.1 IPR003251 Rubrerythrin APE_1814.1 IPR009078 Ferritin-like superfamily APE_1814.1 IPR012347 Ferritin-related APE_1816.1 IPR000362 Fumarate lyase family APE_1816.1 IPR008948 L-Aspartase-like APE_1816.1 IPR018951 Fumarase C, C-terminal APE_1816.1 IPR020557 Fumarate lyase, conserved site APE_1816.1 IPR022761 Fumarate lyase, N-terminal APE_1816.1 IPR024083 Fumarase/histidase, N-terminal APE_1817.1 IPR017006 Uncharacterised conserved protein UCP032756 APE_1818 IPR000948 Ribosomal protein L7Ae, prokaryotes APE_1818 IPR004037 Ribosomal protein L7Ae conserved site APE_1818 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 APE_1818 IPR018492 Ribosomal protein L7Ae/L8/Nhp2 family APE_1818 IPR022481 Ribosomal protein L7Ae, archaea APE_1818 IPR029064 50S ribosomal protein L30e-like APE_1819 IPR001656 Pseudouridine synthase, TruD APE_1819 IPR020103 Pseudouridine synthase, catalytic domain APE_1820 IPR036188 APE_1820 APE_1820 IPR039649 APE_1820 APE_1823 IPR002775 DNA/RNA-binding protein Alba-like APE_1823 IPR013795 DNA/RNA-binding protein Alba APE_1823 IPR036882 APE_1823 APE_1824 IPR008482 Protein of unknown function DUF763 APE_1825.1 IPR002504 Inorganic polyphosphate/ATP-NAD kinase APE_1825.1 IPR011386 Putative ATP-NAD kinase APE_1825.1 IPR016064 ATP-NAD kinase-like domain APE_1827.1 IPR013525 ABC-2 type transporter APE_1828.1 IPR013525 ABC-2 type transporter APE_1829 IPR003439 ABC transporter-like APE_1829 IPR003593 AAA+ ATPase domain APE_1829 IPR017871 ABC transporter, conserved site APE_1829 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1831.1 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APE_1831.1 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APE_1831.1 IPR023519 Glyoxylate reductase GyaR APE_1831.1 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APE_1831.1 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APE_1831.1 IPR036291 APE_1831.1 APE_1832 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain APE_1832 IPR011042 Six-bladed beta-propeller, TolB-like APE_1832 IPR011659 WD40-like Beta Propeller APE_1832 IPR029058 Alpha/Beta hydrolase fold APE_1832a.1 IPR002775 DNA/RNA-binding protein Alba-like APE_1832a.1 IPR013795 DNA/RNA-binding protein Alba APE_1832a.1 IPR036882 APE_1832a.1 APE_1834.1 IPR000836 Phosphoribosyltransferase domain APE_1834.1 IPR005946 Ribose-phosphate diphosphokinase APE_1834.1 IPR029057 Phosphoribosyltransferase-like APE_1834.1 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain APE_1834.1 IPR037514 APE_1834.1 APE_1835 IPR000241 Putative RNA methylase domain APE_1835 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APE_1835 IPR005885 Conserved hypothetical protein CHP01177 APE_1835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_1836.1 IPR001279 Beta-lactamase-like APE_1836.1 IPR013471 Ribonuclease Z/BN APE_1836.1 IPR036866 APE_1836.1 APE_1838.1 IPR000644 CBS domain APE_1842 IPR001848 Ribosomal protein S10 APE_1842 IPR005729 Ribosomal protein S10, eukaryotic/archaeal APE_1842 IPR027486 Ribosomal protein S10 domain APE_1842 IPR036838 APE_1842 APE_1844 IPR000795 Elongation factor, GTP-binding domain APE_1844 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APE_1844 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 APE_1844 IPR004539 Translation elongation factor EF1A, eukaryotic/archaeal APE_1844 IPR005225 Small GTP-binding protein domain APE_1844 IPR009000 Translation protein, beta-barrel domain APE_1844 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APE_1844 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1844 IPR031157 APE_1844 APE_1846.1 IPR000235 Ribosomal protein S5/S7 APE_1846.1 IPR005716 Ribosomal protein S5/S7, eukaryotic/archaeal APE_1846.1 IPR020606 Ribosomal protein S7, conserved site APE_1846.1 IPR023798 Ribosomal protein S7 domain APE_1846.1 IPR026018 Ribosomal protein S7, archaeal APE_1846.1 IPR036823 APE_1846.1 APE_1848.1 IPR003729 Bifunctional nuclease domain APE_1848.1 IPR036104 APE_1848.1 APE_1849 IPR005680 Ribosomal protein S23, eukaryotic/archaeal APE_1849 IPR006032 Ribosomal protein S12/S23 APE_1849 IPR012340 Nucleic acid-binding, OB-fold APE_1849 IPR022863 Ribosomal protein S12 APE_1850 IPR004044 K Homology domain, type 2 APE_1850 IPR004087 K Homology domain APE_1850 IPR009019 K homology domain, prokaryotic type APE_1850 IPR010212 NusA protein, KH domain-containing, archaeal APE_1850 IPR015946 K homology domain-like, alpha/beta APE_1851.1 IPR000231 Ribosomal protein L30e APE_1851.1 IPR000948 Ribosomal protein L7Ae, prokaryotes APE_1851.1 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 APE_1851.1 IPR022991 Ribosomal protein L30e, conserved site APE_1851.1 IPR029064 50S ribosomal protein L30e-like APE_1852.1 IPR007081 RNA polymerase Rpb1, domain 5 APE_1852.1 IPR012757 DNA-directed RNA polymerase subunit A'' APE_1853.1 IPR000722 RNA polymerase, alpha subunit APE_1853.1 IPR006592 RNA polymerase, N-terminal APE_1853.1 IPR007066 RNA polymerase Rpb1, domain 3 APE_1853.1 IPR007080 RNA polymerase Rpb1, domain 1 APE_1853.1 IPR007081 RNA polymerase Rpb1, domain 5 APE_1853.1 IPR007083 RNA polymerase Rpb1, domain 4 APE_1853.1 IPR012758 DNA-directed RNA polymerase subunit A' (Rpo1N) APE_1853.1 IPR038120 APE_1853.1 APE_1856 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 APE_1856 IPR007121 RNA polymerase, beta subunit, conserved site APE_1856 IPR007641 RNA polymerase Rpb2, domain 7 APE_1856 IPR007642 RNA polymerase Rpb2, domain 2 APE_1856 IPR007644 RNA polymerase, beta subunit, protrusion APE_1856 IPR007645 RNA polymerase Rpb2, domain 3 APE_1856 IPR007646 RNA polymerase Rpb2, domain 4 APE_1856 IPR007647 RNA polymerase Rpb2, domain 5 APE_1856 IPR014724 RNA polymerase Rpb2, OB-fold APE_1856 IPR019969 DNA-directed RNA polymerase subunit B (Rpo2) APE_1856 IPR037033 APE_1856 APE_1856 IPR037034 APE_1856 APE_1856a IPR000783 RNA polymerase, subunit H/Rpb5 C-terminal APE_1856a IPR020608 RNA polymerase, subunit H/Rpb5, conserved site APE_1856a IPR020609 Archaeal RpoH /eukaryotic RPB5 RNA polymerase subunit APE_1856a IPR035913 APE_1856a APE_1861.1 IPR004376 Conserved hypothetical protein CHP00024, phosphoesterase-like APE_1861.1 IPR004843 Calcineurin-like phosphoesterase domain, apaH type APE_1861.1 IPR024173 Phosphoesterase, MJ0037 APE_1861.1 IPR029052 Metallo-dependent phosphatase-like APE_1862.1 IPR000814 TATA-box binding protein APE_1862.1 IPR012295 Beta2-adaptin/TBP, C-terminal domain APE_1862.1 IPR030491 APE_1862.1 APE_1865.1 IPR006638 Elongator protein 3/MiaB/NifB APE_1865.1 IPR007197 Radical SAM APE_1865.1 IPR013785 Aldolase-type TIM barrel APE_1865.1 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted APE_1865.1 IPR027596 AmmeMemoRadiSam system radical SAM enzyme APE_1866.1 IPR017140 Uncharacterised conserved protein UCP037214 APE_1867.1 IPR006685 Mechanosensitive ion channel MscS APE_1867.1 IPR010920 Like-Sm (LSM) domain APE_1867.1 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 APE_1867.1 IPR011066 Mechanosensitive ion channel MscS, C-terminal APE_1867.1 IPR023408 APE_1867.1 APE_1868.1 IPR007366 Protein of unknown function DUF432 APE_1869 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II APE_1869 IPR004554 Hydroxymethylglutaryl-CoA reductase, eukaryotic/arcaheal type APE_1869 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain APE_1869 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain APE_1869 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain APE_1869 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site APE_1871.1 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal APE_1871.1 IPR012340 Nucleic acid-binding, OB-fold APE_1871.1 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal APE_1872.1 IPR002155 Thiolase APE_1872.1 IPR016039 Thiolase-like APE_1872.1 IPR020616 Thiolase, N-terminal APE_1873.1 IPR004656 Putative condensing enzyme FabH-related APE_1873.1 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal APE_1873.1 IPR016039 Thiolase-like APE_1874.1 IPR006638 Elongator protein 3/MiaB/NifB APE_1874.1 IPR007197 Radical SAM APE_1874.1 IPR013785 Aldolase-type TIM barrel APE_1877.1 IPR022764 Peptidase S54, rhomboid domain APE_1877.1 IPR035952 APE_1877.1 APE_1878 IPR000537 UbiA prenyltransferase family APE_1878 IPR006369 Protohaem IX farnesyltransferase APE_1878 IPR030470 APE_1878 APE_1882.1 IPR015943 WD40/YVTN repeat-like-containing domain APE_1882.1 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APE_1882.1 IPR036278 APE_1882.1 APE_1885 IPR000845 Nucleoside phosphorylase domain APE_1885 IPR010044 Methylthioadenosine phosphorylase (MTAP) APE_1885 IPR018099 Purine phosphorylase, family 2, conserved site APE_1885 IPR035994 APE_1885 APE_1887.1 IPR009015 L-fucose isomerase, N-terminal/central domain APE_1889 IPR013216 Methyltransferase type 11 APE_1889 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_1891.1 IPR003439 ABC transporter-like APE_1891.1 IPR003593 AAA+ ATPase domain APE_1891.1 IPR017871 ABC transporter, conserved site APE_1891.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1892 IPR000515 MetI-like domain APE_1892 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family APE_1892 IPR035906 APE_1892 APE_1893.1 IPR001638 Extracellular solute-binding protein, family 3 APE_1894 IPR016619 Uncharacterised conserved protein UCP014439, ACT APE_1894 IPR027795 GATS-like ACT domain APE_1895.1 IPR018076 Type II secretion system F domain APE_1896.1 IPR001482 Type II secretion system protein E APE_1896.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1898 IPR003593 AAA+ ATPase domain APE_1898 IPR014774 Circadian clock protein KaiC/DNA repair protein RadA APE_1898 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1901 IPR002774 Flagellin, archaea APE_1905 IPR002774 Flagellin, archaea APE_1905 IPR013373 Flagellin/pilin, N-terminal APE_1907 IPR002774 Flagellin, archaea APE_1907 IPR013373 Flagellin/pilin, N-terminal APE_1911.1 IPR003439 ABC transporter-like APE_1911.1 IPR003593 AAA+ ATPase domain APE_1911.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1914.1 IPR005829 Sugar transporter, conserved site APE_1914.1 IPR011701 Major facilitator superfamily APE_1914.1 IPR036259 APE_1914.1 APE_1917 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site APE_1917 IPR002933 Peptidase M20 APE_1921 IPR004860 Homing endonuclease, LAGLIDADG APE_1921 IPR027434 Homing endonuclease APE_1929.1 IPR004860 Homing endonuclease, LAGLIDADG APE_1929.1 IPR027434 Homing endonuclease APE_1934.1 IPR003439 ABC transporter-like APE_1934.1 IPR003593 AAA+ ATPase domain APE_1934.1 IPR017871 ABC transporter, conserved site APE_1934.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1937.1 IPR002855 Probable pantothenate synthetase/4-phosphopantoate--beta-alanine ligase APE_1937.1 IPR038138 APE_1937.1 APE_1939.1 IPR012043 Pantoate kinase APE_1940.1 IPR001347 Sugar isomerase (SIS) APE_1940.1 IPR017552 3-hexulose-6-phosphate isomerase APE_1949.1 IPR004457 Zinc finger, ZPR1-type APE_1949.1 IPR004470 Zinc finger, ZPR1-type, subgroup APE_1950.1 IPR002068 Alpha crystallin/Hsp20 domain APE_1950.1 IPR008978 HSP20-like chaperone APE_1952.1 IPR011777 Geranylgeranyl reductase family APE_1952.1 IPR036188 APE_1952.1 APE_1954 IPR000182 GNAT domain APE_1954 IPR016181 Acyl-CoA N-acyltransferase APE_1956a.1 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain APE_1958.1 IPR003694 NAD(+) synthetase APE_1958.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1958.1 IPR022310 NAD/GMP synthase APE_1958.1 IPR022926 NH(3)-dependent NAD(+) synthetase APE_1959.1 IPR003382 Flavoprotein APE_1959.1 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC APE_1959.1 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal APE_1959.1 IPR035929 APE_1959.1 APE_1959.1 IPR036551 APE_1959.1 APE_1961 IPR018170 Aldo/keto reductase, conserved site APE_1961 IPR020471 Aldo/keto reductase subgroup APE_1961 IPR023210 NADP-dependent oxidoreductase domain APE_1961 IPR036812 APE_1961 APE_1962.1 IPR001085 Serine hydroxymethyltransferase APE_1962.1 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_1962.1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_1962.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_1962.1 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site APE_1962.1 IPR039429 APE_1962.1 APE_1963.1 IPR001670 Alcohol dehydrogenase, iron-type APE_1963.1 IPR018211 Alcohol dehydrogenase, iron-type, conserved site APE_1964.1 IPR003033 SCP2 sterol-binding domain APE_1964.1 IPR036527 APE_1964.1 APE_1968 IPR001048 Aspartate/glutamate/uridylate kinase APE_1968 IPR003964 Carbamate kinase APE_1968 IPR036393 APE_1968 APE_1971.1 IPR003495 CobW/HypB/UreG domain APE_1971.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1976.1 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain APE_1976.1 IPR002317 Serine-tRNA ligase, type1 APE_1976.1 IPR010978 tRNA-binding arm APE_1976.1 IPR015866 Serine-tRNA synthetase, type1, N-terminal APE_1979.1 IPR002744 Domain of unknown function DUF59 APE_1979.1 IPR034904 APE_1979.1 APE_1980.1 IPR001453 Molybdopterin binding domain APE_1980.1 IPR023055 Molybdopterin binding, CinA-type APE_1980.1 IPR036425 APE_1980.1 APE_1984.1 IPR013653 FR47-like APE_1984.1 IPR016181 Acyl-CoA N-acyltransferase APE_1986.1 IPR004821 Cytidyltransferase-like domain APE_1986.1 IPR006418 Nicotinamide-nucleotide adenylyltransferase, archaeal type APE_1986.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1988.1 IPR004403 Peptide chain release factor eRF1/aRF1 APE_1988.1 IPR005140 eRF1 domain 1/Pelota-like APE_1988.1 IPR005141 eRF1 domain 2 APE_1988.1 IPR005142 eRF1 domain 3 APE_1988.1 IPR020918 Peptide chain release factor aRF1 APE_1988.1 IPR024049 Peptide Chain Release Factor eRF1/aRF1, N-terminal APE_1988.1 IPR029064 50S ribosomal protein L30e-like APE_1992.1 IPR002292 Ornithine/putrescine carbamoyltransferase APE_1992.1 IPR006130 Aspartate/ornithine carbamoyltransferase APE_1992.1 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain APE_1992.1 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding APE_1992.1 IPR024904 Ornithine carbamoyltransferase APE_1992.1 IPR036901 APE_1992.1 APE_1995.1 IPR036388 APE_1995.1 APE_1995.1 IPR036390 APE_1995.1 APE_1996.1 IPR036390 APE_1996.1 APE_1998 IPR006978 Domain of unknown function DUF650 APE_1998 IPR006979 Domain of unknown function DUF651 APE_1998 IPR033167 APE_1998 APE_1999 IPR036721 APE_1999 APE_1999 IPR038078 APE_1999 APE_2001.1 IPR018665 Protein of unknown function DUF2122, RecB-family nuclease-related APE_2002 IPR001525 C-5 cytosine methyltransferase APE_2002 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_2004.1 IPR002853 Transcription factor TFIIE, alpha subunit APE_2004.1 IPR013137 Zinc finger, TFIIB-type APE_2004.1 IPR016481 Transcription factor TFE, archaea APE_2004.1 IPR024550 TFIIEalpha/SarR/Rpc3 HTH domain APE_2004.1 IPR036388 APE_2004.1 APE_2004.1 IPR036390 APE_2004.1 APE_2006.1 IPR002845 tRNA ribose 2'-O-methyltransferase, aTrm56 APE_2006.1 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APE_2006.1 IPR029028 Alpha/beta knot methyltransferases APE_2007 IPR006073 GTP binding domain APE_2007 IPR016496 GTPase HflX APE_2007 IPR025121 GTPase HflX N-terminal domain APE_2007 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2007 IPR032305 APE_2007 APE_2011.1 IPR001387 Cro/C1-type helix-turn-helix domain APE_2011.1 IPR004451 Conserved hypothetical protein CHP00270 APE_2011.1 IPR010982 Lambda repressor-like, DNA-binding domain APE_2012 IPR003593 AAA+ ATPase domain APE_2012 IPR003959 ATPase, AAA-type, core APE_2012 IPR003960 ATPase, AAA-type, conserved site APE_2012 IPR005937 26S proteasome subunit P45 APE_2012 IPR023501 Proteasome-activating nucleotidase PAN APE_2012 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2015.1 IPR031555 APE_2015.1 APE_2017 IPR002616 tRNA-guanine(15) transglycosylase-like APE_2017 IPR004804 tRNA-guanine(15) transglycosylase APE_2017 IPR036511 APE_2017 APE_2018.1 IPR019151 Proteasome assembly chaperone 2 APE_2018.1 IPR038389 APE_2018.1 APE_2020 IPR015947 PUA-like domain APE_2020 IPR029402 tRNA-guanine transglycosylase, patch-forming domain C2 APE_2020 IPR036974 APE_2020 APE_2020 IPR038250 APE_2020 APE_2021.1 IPR002481 Ferric-uptake regulator APE_2021.1 IPR036388 APE_2021.1 APE_2021.1 IPR036390 APE_2021.1 APE_2023 IPR000192 Aminotransferase class V domain APE_2023 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_2023 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_2023 IPR015424 Pyridoxal phosphate-dependent transferase APE_2023 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site APE_2029.1 IPR002805 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, putative APE_2029.1 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like APE_2029.1 IPR036087 APE_2029.1 APE_2032.1 IPR002808 Adenosylcobinamide amidohydrolase, CbiZ APE_2032.1 IPR017577 Alpha-ribazole phosphatase, CobZ APE_2032.1 IPR021167 Uncharacterised conserved protein, UCP027887, phosphatidlglycerophosphatase-related APE_2032.1 IPR036681 APE_2032.1 APE_2034.1 IPR025877 MobA-like NTP transferase domain APE_2034.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_2035.1 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site APE_2035.1 IPR004839 Aminotransferase, class I/classII APE_2035.1 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_2035.1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_2035.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2037.1 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase APE_2039.1 IPR004485 Cobalamin biosynthesis CobD/CbiB APE_2041.1 IPR001962 Asparagine synthase APE_2041.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2042.1 IPR002761 DUF71 domain APE_2042.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2044.1 IPR010918 AIR synthase-related protein, C-terminal domain APE_2044.1 IPR011854 Hydrogenase expression/formation protein HypE APE_2044.1 IPR016188 PurM, N-terminal-like APE_2044.1 IPR036676 APE_2044.1 APE_2044.1 IPR036921 APE_2044.1 APE_2048 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal APE_2048 IPR022921 Probable homocysteine methyltransferase MetE, archaeal APE_2048 IPR038071 APE_2048 APE_2050.1 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal APE_2050.1 IPR038071 APE_2050.1 APE_2052.1 IPR004095 TGS APE_2052.1 IPR006073 GTP binding domain APE_2052.1 IPR012675 Beta-grasp domain APE_2052.1 IPR012676 TGS-like APE_2052.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2052.1 IPR031662 APE_2052.1 APE_2055.1 IPR003010 Carbon-nitrogen hydrolase APE_2055.1 IPR036526 APE_2055.1 APE_2056.1 IPR000086 NUDIX hydrolase domain APE_2056.1 IPR015797 NUDIX hydrolase domain-like APE_2056.1 IPR020084 NUDIX hydrolase, conserved site APE_2057.1 IPR036390 APE_2057.1 APE_2060.1 IPR003439 ABC transporter-like APE_2060.1 IPR003593 AAA+ ATPase domain APE_2060.1 IPR008995 Molybdate/tungstate binding, C-terminal APE_2060.1 IPR017871 ABC transporter, conserved site APE_2060.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2062.1 IPR000788 Ribonucleotide reductase large subunit, C-terminal APE_2062.1 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal APE_2062.1 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent APE_2062.1 IPR013509 Ribonucleotide reductase large subunit, N-terminal APE_2064.1 IPR003669 Thymidylate synthase ThyX APE_2064.1 IPR036098 APE_2064.1 APE_2066.1 IPR001296 Glycosyl transferase, family 1 APE_2066.1 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain APE_2067.1 IPR000870 Homoserine kinase APE_2067.1 IPR006203 GHMP kinase, ATP-binding, conserved site APE_2067.1 IPR006204 GHMP kinase N-terminal domain APE_2067.1 IPR013750 GHMP kinase, C-terminal domain APE_2067.1 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_2067.1 IPR020568 Ribosomal protein S5 domain 2-type fold APE_2067.1 IPR036554 APE_2067.1 APE_2068 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APE_2068 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_2068 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_2068 IPR015424 Pyridoxal phosphate-dependent transferase APE_2071.1 IPR000836 Phosphoribosyltransferase domain APE_2071.1 IPR029057 Phosphoribosyltransferase-like APE_2071a IPR001210 Ribosomal protein S17e APE_2071a IPR018273 Ribosomal protein S17e, conserved site APE_2071a IPR036401 APE_2071a APE_2072.1 IPR002194 Chaperonin TCP-1, conserved site APE_2072.1 IPR002423 Chaperonin Cpn60/TCP-1 APE_2072.1 IPR012714 Thermosome, archaeal APE_2072.1 IPR017998 Chaperone tailless complex polypeptide 1 (TCP-1) APE_2072.1 IPR027409 GroEL-like apical domain APE_2072.1 IPR027410 TCP-1-like chaperonin intermediate domain APE_2072.1 IPR027413 GroEL-like equatorial domain APE_2074.1 IPR002305 Aminoacyl-tRNA synthetase, class Ic APE_2074.1 IPR002307 Tyrosine-tRNA ligase APE_2074.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2074.1 IPR023617 Tyrosine-tRNA ligase, archaeal/eukaryotic-type APE_2074.1 IPR023678 Tyrosine-tRNA ligase, type 4 APE_2075 IPR002500 Phosphoadenosine phosphosulphate reductase APE_2075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2078 IPR002830 UbiD decarboxylyase family APE_2080.1 IPR000086 NUDIX hydrolase domain APE_2080.1 IPR015797 NUDIX hydrolase domain-like APE_2080.1 IPR020084 NUDIX hydrolase, conserved site APE_2080.1 IPR020476 NUDIX hydrolase APE_2081.1 IPR000787 Peptidase M29, aminopeptidase II APE_2081.1 IPR035097 APE_2081.1 APE_2084.1 IPR007159 AbrB-like domain APE_2084.1 IPR026022 PhoU domain APE_2084.1 IPR038078 APE_2084.1 APE_2085.1 IPR001884 Translation elongation factor IF5A APE_2085.1 IPR008991 Translation protein SH3-like domain APE_2085.1 IPR012340 Nucleic acid-binding, OB-fold APE_2085.1 IPR013185 Translation elongation factor, KOW-like APE_2085.1 IPR014722 Ribosomal protein L2 domain 2 APE_2085.1 IPR019769 Translation elongation factor, IF5A, hypusine site APE_2085.1 IPR020189 Translation elongation factor, IF5A C-terminal APE_2085.1 IPR022847 Translation elongation factor IF5A, archaeal APE_2086 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase APE_2086 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2086 IPR035107 APE_2086 APE_2086a IPR012675 Beta-grasp domain APE_2086a IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APE_2087.1 IPR007506 Domain of unknown function DUF521 APE_2089 IPR002840 Domain of unknown function DUF126 APE_2089 IPR012016 Uncharacterised protein family UPF0107 APE_2089 IPR020794 Uncharacterised protein family UPF0107, archaea APE_2090 IPR018094 Thymidylate kinase APE_2090 IPR018095 Thymidylate kinase, conserved site APE_2090 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2090 IPR039430 APE_2090 APE_2091.1 IPR000600 ROK APE_2093 IPR002789 Domain of unknown function DUF87 APE_2093 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2094.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2096.1 IPR006171 Toprim domain APE_2096.1 IPR020607 Uncharacterised protein family UPF0095 APE_2098.1 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain APE_2098.1 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain APE_2098.1 IPR006172 DNA-directed DNA polymerase, family B APE_2098.1 IPR012337 Ribonuclease H-like domain APE_2098.1 IPR017964 DNA-directed DNA polymerase, family B, conserved site APE_2098.1 IPR036397 APE_2098.1 APE_2104.1 IPR001719 AP endonuclease 2 APE_2104.1 IPR013022 Xylose isomerase-like, TIM barrel domain APE_2104.1 IPR036237 APE_2104.1 APE_2105.1 IPR000845 Nucleoside phosphorylase domain APE_2105.1 IPR010058 Uridine phosphorylase APE_2105.1 IPR018016 Nucleoside phosphorylase, conserved site APE_2105.1 IPR035994 APE_2105.1 APE_2106.1 IPR002139 Ribokinase APE_2106.1 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site APE_2106.1 IPR011611 Carbohydrate kinase PfkB APE_2106.1 IPR029056 Ribokinase-like APE_2108 IPR002155 Thiolase APE_2108 IPR016039 Thiolase-like APE_2108 IPR020610 Thiolase, active site APE_2108 IPR020613 Thiolase, conserved site APE_2108 IPR020616 Thiolase, N-terminal APE_2108 IPR020617 Thiolase, C-terminal APE_2109 IPR006158 Cobalamin (vitamin B12)-binding domain APE_2109 IPR006638 Elongator protein 3/MiaB/NifB APE_2109 IPR007197 Radical SAM APE_2109 IPR023404 Radical SAM, alpha/beta horseshoe APE_2109 IPR023980 Conserved hypothetical protein CHP04013, B12-binding/radical SAM-type APE_2110 IPR003744 Protein of unknown function DUF165 APE_2112.1 IPR023465 Riboflavin kinase domain APE_2112.1 IPR023470 Riboflavin kinase, archaeal APE_2112.1 IPR023602 Riboflavin kinase domain, CTP-dependent APE_2115.1 IPR006680 Amidohydrolase 1 APE_2115.1 IPR032466 APE_2115.1 APE_2121.1 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_2121.1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_2121.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2121.1 IPR023012 Glycine cleavage system P protein, subunit 2, putative APE_2124.1 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_2124.1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_2124.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2124.1 IPR020581 Glycine cleavage system P protein APE_2124.1 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 APE_2125.1 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APE_2125.1 IPR024706 Peroxiredoxin, AhpC-type APE_2125.1 IPR036249 APE_2125.1 APE_2126.1 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain APE_2126.1 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal APE_2126.1 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II APE_2126.1 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain APE_2126.1 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit APE_2126.1 IPR029061 Thiamin diphosphate-binding fold APE_2126.1 IPR033412 APE_2126.1 APE_2128 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APE_2128 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate APE_2128 IPR029061 Thiamin diphosphate-binding fold APE_2128 IPR032686 APE_2128 APE_2129.1 IPR015001 Protein of unknown function DUF1850 APE_2130.1 IPR005814 Aminotransferase class-III APE_2130.1 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_2130.1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_2130.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2133 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APE_2133 IPR011853 TRAP transporter, 4TM/12TM fusion protein APE_2136.1 IPR011852 TRAP transporter solute receptor, TAXI family APE_2139.1 IPR002838 Mitochondrial biogenesis protein AIM24 APE_2139.1 IPR016031 Tryptophan RNA-binding attenuator protein-like domain APE_2139.1 IPR036983 APE_2139.1 APE_2139a IPR003369 Sec-independent protein translocase protein TatA/B/E APE_2139a IPR006312 Sec-independent protein translocase protein TatA/E APE_2142.1 IPR004809 Glutamine synthetase type I APE_2142.1 IPR008146 Glutamine synthetase, catalytic domain APE_2142.1 IPR008147 Glutamine synthetase, beta-Grasp APE_2142.1 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain APE_2142.1 IPR027302 Glutamine synthetase, N-terminal conserved site APE_2142.1 IPR027303 Glutamine synthetase, glycine-rich site APE_2142.1 IPR036651 APE_2142.1 APE_2144.1 IPR001650 Helicase, C-terminal APE_2144.1 IPR011545 DEAD/DEAH box helicase domain APE_2144.1 IPR013701 DEAD/H associated APE_2144.1 IPR014001 Helicase, superfamily 1/2, ATP-binding domain APE_2144.1 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted APE_2144.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2147.1 IPR005656 MmgE/PrpD APE_2147.1 IPR036148 APE_2147.1 APE_2149.1 IPR002922 Thiazole biosynthetic enzyme Thi4 family APE_2149.1 IPR022828 Thiazole biosynthetic enzyme, putative APE_2149.1 IPR036188 APE_2149.1 APE_2151.1 IPR002810 NfeD-like, C-terminal domain APE_2151.1 IPR029045 ClpP/crotonase-like domain APE_2153.1 IPR001107 Band 7 protein APE_2153.1 IPR001972 Stomatin family APE_2153.1 IPR036013 APE_2153.1 APE_2154.1 IPR002033 Sec-independent periplasmic protein translocase TatC APE_2154.1 IPR011532 Sec-independent protein translocase TatC, archaeal-type APE_2154a IPR003369 Sec-independent protein translocase protein TatA/B/E APE_2154a IPR006312 Sec-independent protein translocase protein TatA/E APE_2154b IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2155.1 IPR003339 ABC/ECF transporter, transmembrane component APE_2156.1 IPR001279 Beta-lactamase-like APE_2156.1 IPR036866 APE_2156.1 APE_2158.1 IPR006089 Acyl-CoA dehydrogenase, conserved site APE_2158.1 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APE_2158.1 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_2158.1 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain APE_2158.1 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APE_2158.1 IPR036250 APE_2158.1 APE_2158.1 IPR037069 APE_2158.1 APE_2161 IPR011059 Metal-dependent hydrolase, composite domain APE_2161 IPR013108 Amidohydrolase 3 APE_2161 IPR032466 APE_2161 APE_2162.1 IPR003706 Carbon starvation protein CstA APE_2162.1 IPR025299 CstA C-terminal domain APE_2164.1 IPR025723 Anion-transporting ATPase-like domain APE_2164.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2165 IPR025723 Anion-transporting ATPase-like domain APE_2165 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2166 IPR002318 Alanine-tRNA ligase, class IIc APE_2166 IPR003156 DHHA1 domain APE_2166 IPR009000 Translation protein, beta-barrel domain APE_2166 IPR012947 Threonyl/alanyl tRNA synthetase, SAD APE_2166 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain APE_2166 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain APE_2166 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal APE_2166 IPR022429 Alanine-tRNA ligase, archaea APE_2170 IPR022295 Ribosomal protein L12, archaea APE_2170 IPR027534 Ribosomal protein L12 family APE_2170 IPR038716 APE_2170 APE_2171.1 IPR001790 Ribosomal protein L10/acidic P0 APE_2171.1 IPR022909 50S ribosomal protein L10, archaea APE_2173.1 IPR002143 Ribosomal protein L1 APE_2173.1 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APE_2173.1 IPR023669 Ribosomal protein L1, archaea APE_2173.1 IPR023674 Ribosomal protein L1-like APE_2173.1 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APE_2174 IPR000911 Ribosomal protein L11/L12 APE_2174 IPR020783 Ribosomal protein L11, C-terminal APE_2174 IPR020785 Ribosomal protein L11, conserved site APE_2174 IPR036769 APE_2174 APE_2176.1 IPR005100 Transcription elongation factor Spt5, NGN domain APE_2176.1 IPR005824 KOW APE_2176.1 IPR006645 NusG, N-terminal APE_2176.1 IPR008991 Translation protein SH3-like domain APE_2176.1 IPR011590 Transcription elongation factor Spt5, archaeal APE_2176.1 IPR014722 Ribosomal protein L2 domain 2 APE_2176.1 IPR036735 APE_2176.1 APE_2176a IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit APE_2176a IPR008158 Protein translocase SEC61 complex, gamma subunit APE_2176a IPR023391 Protein translocase SecE domain APE_2177.1 IPR002782 Mut7-C RNAse domain APE_2177.1 IPR029060 PIN domain-like APE_2178.1 IPR000644 CBS domain APE_2180.1 IPR002763 Protein of unknown function DUF72 APE_2180.1 IPR036520 APE_2180.1 APE_2182 IPR000730 Proliferating cell nuclear antigen, PCNA APE_2182 IPR022648 Proliferating cell nuclear antigen, PCNA, N-terminal APE_2182 IPR022659 Proliferating cell nuclear antigen, PCNA, conserved site APE_2188.1 IPR001650 Helicase, C-terminal APE_2188.1 IPR011545 DEAD/DEAH box helicase domain APE_2188.1 IPR013701 DEAD/H associated APE_2188.1 IPR014001 Helicase, superfamily 1/2, ATP-binding domain APE_2188.1 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted APE_2188.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2190 IPR038763 APE_2190 APE_2192.1 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb APE_2192.1 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) APE_2192.1 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type APE_2192.1 IPR004523 Aspartyl-tRNA synthetases APE_2192.1 IPR012340 Nucleic acid-binding, OB-fold APE_2195 IPR002746 Uncharacterised protein family UPF0216 APE_2195 IPR012357 Uncharacterised conserved protein UCP024484 APE_2196 IPR000692 Fibrillarin APE_2196 IPR020813 Fibrillarin, conserved site APE_2196 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_2199.1 IPR002687 Nop domain APE_2199.1 IPR012976 NOSIC APE_2199.1 IPR029012 Helix hairpin bin domain APE_2199.1 IPR036070 APE_2199.1 APE_2199a IPR006846 Ribosomal protein S30 APE_2200 IPR006033 L-asparaginase, type I APE_2200 IPR006034 Asparaginase/glutaminase APE_2200 IPR011878 Glutamyl-tRNA(Gln) amidotransferase subunit D APE_2200 IPR027473 L-asparaginase, C-terminal domain APE_2200 IPR027474 L-asparaginase, N-terminal APE_2200 IPR027475 Asparaginase/glutaminase, active site 2 APE_2200 IPR036152 APE_2200 APE_2200 IPR037152 APE_2200 APE_2200 IPR037222 APE_2200 APE_2202 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related APE_2202 IPR004115 GAD-like domain APE_2202 IPR004414 Glutamyl-tRNA(Gln) amidotransferase subunit E APE_2202 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic APE_2202 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain APE_2202 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site APE_2202 IPR018027 Asn/Gln amidotransferase APE_2202 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal APE_2202 IPR029351 GAD domain APE_2206.1 IPR018076 Type II secretion system F domain APE_2207.1 IPR018076 Type II secretion system F domain APE_2208.1 IPR001482 Type II secretion system protein E APE_2208.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2211.1 IPR003718 OsmC/Ohr family APE_2211.1 IPR015946 K homology domain-like, alpha/beta APE_2211.1 IPR036102 APE_2211.1 APE_2212.1 IPR002825 Peptidase S49, serine-peptidase prokaryotes APE_2212.1 IPR029045 ClpP/crotonase-like domain APE_2213 IPR001041 2Fe-2S ferredoxin-type domain APE_2213 IPR002888 [2Fe-2S]-binding APE_2213 IPR012675 Beta-grasp domain APE_2213 IPR036010 APE_2213 APE_2213 IPR036884 APE_2213 APE_2216.1 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APE_2216.1 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding APE_2216.1 IPR036856 APE_2216.1 APE_2216.1 IPR037165 APE_2216.1 APE_2219 IPR002346 Molybdopterin dehydrogenase, FAD-binding APE_2219 IPR005107 CO dehydrogenase flavoprotein, C-terminal APE_2219 IPR016167 FAD-binding, type 2, subdomain 1 APE_2219 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 APE_2219 IPR036318 APE_2219 APE_2219 IPR036683 APE_2219 APE_2220.1 IPR003593 AAA+ ATPase domain APE_2220.1 IPR011704 ATPase, dynein-related, AAA domain APE_2220.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2221.1 IPR002035 von Willebrand factor, type A APE_2221.1 IPR008912 Uncharacterised protein family CoxE-like APE_2221.1 IPR036465 APE_2221.1 APE_2223 IPR025877 MobA-like NTP transferase domain APE_2223 IPR029044 Nucleotide-diphospho-sugar transferases APE_2225.1 IPR010419 Carbon monoxide dehydrogenase subunit G APE_2225.1 IPR023393 START-like domain APE_2227 IPR003777 XdhC- CoxI APE_2227 IPR027051 XdhC Rossmann domain APE_2229.1 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain APE_2229.1 IPR023211 DNA polymerase, palm domain APE_2235 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2239.1 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site APE_2239.1 IPR011032 GroES (chaperonin 10)-like APE_2239.1 IPR013149 Alcohol dehydrogenase, C-terminal APE_2239.1 IPR013154 Alcohol dehydrogenase GroES-like APE_2239.1 IPR020843 Polyketide synthase, enoylreductase APE_2239.1 IPR036291 APE_2239.1 APE_2240 IPR006680 Amidohydrolase 1 APE_2240 IPR032466 APE_2240 APE_2242.1 IPR002744 Domain of unknown function DUF59 APE_2242.1 IPR034904 APE_2242.1 APE_2246.1 IPR007438 Protein of unknown function DUF488 APE_2246.1 IPR014519 Uncharacterised conserved protein UCP024492 APE_2247 IPR003180 Methylpurine-DNA glycosylase (MPG) APE_2247 IPR011034 Formyl transferase, C-terminal-like APE_2247 IPR036995 APE_2247 APE_2248.1 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site APE_2248.1 IPR004839 Aminotransferase, class I/classII APE_2248.1 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_2248.1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_2248.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2252.1 IPR000515 MetI-like domain APE_2252.1 IPR035906 APE_2252.1 APE_2253.1 IPR000515 MetI-like domain APE_2253.1 IPR035906 APE_2253.1 APE_2254.1 IPR006059 Bacterial extracellular solute-binding, family 1 APE_2256.1 IPR013442 CRISPR-associated protein APE2256 APE_2256.1 IPR016620 Uncharacterised conserved protein UCP014470 APE_2257 IPR000914 Bacterial extracellular solute-binding protein, family 5 APE_2257 IPR030678 APE_2257 APE_2258 IPR000515 MetI-like domain APE_2260 IPR000515 MetI-like domain APE_2260 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APE_2260 IPR035906 APE_2260 APE_2261.1 IPR003439 ABC transporter-like APE_2261.1 IPR003593 AAA+ ATPase domain APE_2261.1 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_2261.1 IPR017871 ABC transporter, conserved site APE_2261.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2263.1 IPR003439 ABC transporter-like APE_2263.1 IPR003593 AAA+ ATPase domain APE_2263.1 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_2263.1 IPR017871 ABC transporter, conserved site APE_2263.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2265.1 IPR001279 Beta-lactamase-like APE_2265.1 IPR036866 APE_2265.1 APE_2267.1 IPR002129 Pyridoxal phosphate-dependent decarboxylase APE_2267.1 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_2267.1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_2267.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2269.1 IPR005277 Uncharacterised protein family, Major Facilitator Superfamily MSF4 APE_2269.1 IPR011701 Major facilitator superfamily APE_2269.1 IPR036259 APE_2269.1 APE_2272.1 IPR000182 GNAT domain APE_2272.1 IPR003439 ABC transporter-like APE_2272.1 IPR003593 AAA+ ATPase domain APE_2272.1 IPR016181 Acyl-CoA N-acyltransferase APE_2272.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2273.1 IPR013766 Thioredoxin domain APE_2273.1 IPR036249 APE_2273.1 APE_2274 IPR002541 Cytochrome c assembly protein APE_2274 IPR003567 Cytochrome c-type biogenesis protein APE_2277.1 IPR003010 Carbon-nitrogen hydrolase APE_2277.1 IPR036526 APE_2277.1 APE_2278 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APE_2278 IPR019479 Peroxiredoxin, C-terminal APE_2278 IPR022915 Peroxiredoxin, TDXH subfamily, putative APE_2278 IPR024706 Peroxiredoxin, AhpC-type APE_2278 IPR036249 APE_2278 APE_2279.1 IPR008269 Peptidase S16, Lon C-terminal APE_2279.1 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_2279.1 IPR020568 Ribosomal protein S5 domain 2-type fold APE_2281.1 IPR004821 Cytidyltransferase-like domain APE_2281.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2281.1 IPR023140 Domain of unknown function DUF357 APE_2281.1 IPR036809 APE_2281.1 APE_2283.1 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APE_2283.1 IPR029052 Metallo-dependent phosphatase-like APE_2284.1 IPR000873 AMP-dependent synthetase/ligase APE_2284.1 IPR020845 AMP-binding, conserved site APE_2284.1 IPR025110 AMP-binding enzyme C-terminal domain APE_2284a IPR007029 YHS domain APE_2284a IPR009078 Ferritin-like superfamily APE_2284a IPR011017 TRASH domain APE_2284a IPR012348 Ribonucleotide reductase-related APE_2286 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site APE_2286 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_2286 IPR004450 Threonine synthase-like APE_2286 IPR026260 Threonine synthase, bacterial/archaeal APE_2286 IPR036052 APE_2286 APE_2289.1 IPR007153 Adenosine specific kinase APE_2289.1 IPR036902 APE_2289.1 APE_2290.1 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain APE_2290.1 IPR011042 Six-bladed beta-propeller, TolB-like APE_2290.1 IPR011659 WD40-like Beta Propeller APE_2290.1 IPR029058 Alpha/Beta hydrolase fold APE_2291 IPR005835 Nucleotidyl transferase APE_2291 IPR029044 Nucleotide-diphospho-sugar transferases APE_2295.1 IPR001279 Beta-lactamase-like APE_2295.1 IPR036866 APE_2295.1 APE_2296 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase APE_2296 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APE_2296 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal APE_2296 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain APE_2296 IPR018214 Glutamyl-tRNA reductase, conserved site APE_2296 IPR036291 APE_2296 APE_2296 IPR036343 APE_2296 APE_2296 IPR036453 APE_2296 APE_2298.1 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase APE_2298.1 IPR022417 Porphobilinogen deaminase, N-terminal APE_2298.1 IPR022418 Porphobilinogen deaminase, C-terminal APE_2298.1 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site APE_2298.1 IPR036803 APE_2298.1 APE_2299.1 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase APE_2299.1 IPR005814 Aminotransferase class-III APE_2299.1 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_2299.1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_2299.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2300.1 IPR001731 Porphobilinogen synthase APE_2300.1 IPR013785 Aldolase-type TIM barrel APE_2300.1 IPR030656 APE_2300.1 APE_2302.1 IPR002319 Phenylalanyl-tRNA synthetase APE_2302.1 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit APE_2302.1 IPR022917 Phenylalanine-tRNA ligase alpha subunit, bacterial/archaeal APE_2302.1 IPR036388 APE_2302.1 APE_2302.1 IPR036390 APE_2302.1 APE_2305 IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic APE_2305 IPR005146 B3/B4 tRNA-binding domain APE_2305 IPR005147 tRNA synthetase, B5-domain APE_2305 IPR009061 DNA binding domain, putative APE_2305 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APE_2305 IPR022918 Phenylalanine-tRNA ligase beta chain 2, bacterial/archaeal APE_2308 IPR003801 GTP cyclohydrolase FolE2/MptA APE_2308 IPR022840 GTP cyclohydrolase MptA APE_2310.1 IPR002575 Aminoglycoside phosphotransferase APE_2310.1 IPR011009 Protein kinase-like domain APE_2311.1 IPR021246 Protein of unknown function DUF2797 APE_2316 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_2316 IPR006316 Tryptophan synthase, beta chain-like APE_2316 IPR006653 Tryptophan synthase, beta chain, conserved site APE_2316 IPR023026 Tryptophan synthase beta chain/beta chain-like APE_2316 IPR036052 APE_2316 APE_2317.1 IPR000924 Glutamyl/glutaminyl-tRNA synthetase APE_2317.1 IPR004526 Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic APE_2317.1 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain APE_2317.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2317.1 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain APE_2317.1 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain APE_2317.1 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain APE_2324.1 IPR001780 Ribosomal protein L35A APE_2324.1 IPR009000 Translation protein, beta-barrel domain APE_2324.1 IPR038661 APE_2324.1 APE_2326.1 IPR000245 V-ATPase proteolipid subunit APE_2326.1 IPR002379 V-ATPase proteolipid subunit C-like domain APE_2326.1 IPR035921 APE_2326.1 APE_2328 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain APE_2328 IPR002316 Proline-tRNA ligase, class IIa APE_2328 IPR004154 Anticodon-binding APE_2328 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type APE_2328 IPR016061 Proline-tRNA ligase, class II, C-terminal APE_2328 IPR017449 Prolyl-tRNA synthetase, class II APE_2328 IPR036621 APE_2328 APE_2328a IPR000892 Ribosomal protein S26e APE_2328a IPR038551 APE_2328a APE_2333.1 IPR003509 Uncharacterised protein family UPF0102 APE_2333.1 IPR011335 Restriction endonuclease type II-like APE_2333.1 IPR011856 tRNA endonuclease-like domain APE_2334.1 IPR007064 NMD3 APE_2336.1 IPR007295 Domain of unknown function DUF402 APE_2336.1 IPR016730 RNA-binding, AU-1 APE_2336.1 IPR035930 APE_2336.1 APE_2336a IPR005354 Uncharacterised protein family UPF0147 APE_2336a IPR023130 Ta0600-like domain APE_2338 IPR002747 S-adenosyl-l-methionine hydroxide adenosyltransferase APE_2338 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal APE_2338 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal APE_2341 IPR004143 Biotin/lipoate A/B protein ligase APE_2342.1 IPR004143 Biotin/lipoate A/B protein ligase APE_2344.1 IPR003698 Lipoyl synthase APE_2344.1 IPR006638 Elongator protein 3/MiaB/NifB APE_2344.1 IPR007197 Radical SAM APE_2344.1 IPR013785 Aldolase-type TIM barrel APE_2347.1 IPR000089 Biotin/lipoyl attachment APE_2347.1 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APE_2347.1 IPR011053 Single hybrid motif APE_2348 IPR001754 Orotidine 5'-phosphate decarboxylase domain APE_2348 IPR011060 Ribulose-phosphate binding barrel APE_2348 IPR013785 Aldolase-type TIM barrel APE_2348 IPR014732 Orotidine 5'-phosphate decarboxylase APE_2349.1 IPR000836 Phosphoribosyltransferase domain APE_2349.1 IPR004467 Orotate phosphoribosyl transferase domain APE_2349.1 IPR023031 Orotate phosphoribosyltransferase APE_2349.1 IPR029057 Phosphoribosyltransferase-like APE_2350.1 IPR000868 Isochorismatase-like APE_2350.1 IPR036380 APE_2350.1 APE_2352.1 IPR004017 Cysteine-rich domain APE_2354 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APE_2354 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_2354 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain APE_2354 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APE_2354 IPR036250 APE_2354 APE_2354 IPR037069 APE_2354 APE_2356.1 IPR002810 NfeD-like, C-terminal domain APE_2359.1 IPR003607 HD/PDEase domain APE_2359.1 IPR006674 HD domain APE_2361.1 IPR000073 Alpha/beta hydrolase fold-1 APE_2361.1 IPR029058 Alpha/Beta hydrolase fold APE_2362.1 IPR000631 YjeF C-terminal domain APE_2362.1 IPR004443 YjeF N-terminal domain APE_2362.1 IPR017953 Carbohydrate kinase, predicted, conserved site APE_2362.1 IPR029056 Ribokinase-like APE_2362.1 IPR030677 APE_2362.1 APE_2362.1 IPR036652 APE_2362.1 APE_2365.1 IPR002716 PIN domain APE_2365.1 IPR006984 rRNA-processing protein Fcf1/Utp23 APE_2365.1 IPR029060 PIN domain-like APE_2366.1 IPR000795 Elongation factor, GTP-binding domain APE_2366.1 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 APE_2366.1 IPR005225 Small GTP-binding protein domain APE_2366.1 IPR009000 Translation protein, beta-barrel domain APE_2366.1 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APE_2366.1 IPR015256 Translation initiation factor 2, gamma subunit, C-terminal APE_2366.1 IPR022424 Translation initiation factor 2, gamma subunit APE_2366.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2371.1 IPR001377 Ribosomal protein S6e APE_2371.1 IPR018282 Ribosomal protein S6e, conserved site APE_2371.1 IPR020924 Ribosomal protein S6e, archaeal APE_2374 IPR000795 Elongation factor, GTP-binding domain APE_2374 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 APE_2374 IPR004544 Translation initiation factor aIF-2, archaea APE_2374 IPR005225 Small GTP-binding protein domain APE_2374 IPR009000 Translation protein, beta-barrel domain APE_2374 IPR023115 Translation initiation factor IF- 2, domain 3 APE_2374 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2374 IPR029459 Elongation factor Tu-type domain APE_2374 IPR036925 APE_2374 APE_2377 IPR001564 Nucleoside diphosphate kinase APE_2377 IPR023005 Nucleoside diphosphate kinase, active site APE_2377 IPR034907 APE_2377 APE_2377 IPR036850 APE_2377 APE_2379 IPR001123 Lysine-type exporter protein (LYSE/YGGA) APE_2379a IPR000988 Ribosomal protein L24e-related APE_2379a IPR011017 TRASH domain APE_2379a IPR023438 Ribosomal protein L24e, archaeal APE_2379a IPR038630 APE_2379a APE_2379b.1 IPR000289 Ribosomal protein S28e APE_2379b.1 IPR012340 Nucleic acid-binding, OB-fold APE_2379b.1 IPR028626 Ribosomal protein S28e conserved site APE_2380.1 IPR006160 Short chain fatty acid transporter AtoE APE_2381.1 IPR006160 Short chain fatty acid transporter AtoE APE_2382.1 IPR002155 Thiolase APE_2382.1 IPR016039 Thiolase-like APE_2384 IPR002155 Thiolase APE_2384 IPR016039 Thiolase-like APE_2389 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal APE_2389 IPR012340 Nucleic acid-binding, OB-fold APE_2389 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal APE_2390.1 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal APE_2390.1 IPR012340 Nucleic acid-binding, OB-fold APE_2390.1 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal APE_2392.1 IPR000182 GNAT domain APE_2392.1 IPR007807 Helicase domain APE_2392.1 IPR013562 Domain of unknown function DUF1726 APE_2392.1 IPR016181 Acyl-CoA N-acyltransferase APE_2392.1 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA APE_2392.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2392.1 IPR027992 Possible tRNA binding domain APE_2397 IPR005145 Putative GTP-binding controlling metal-binding domain APE_2397 IPR006070 YrdC-like domain APE_2397 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 APE_2397 IPR017945 DHBP synthase RibB-like alpha/beta domain APE_2397 IPR038385 APE_2397 APE_2400.1 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase APE_2400.1 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase APE_2400.1 IPR019293 Thiamine-phosphate synthase ThiN APE_2400.1 IPR029056 Ribokinase-like APE_2400.1 IPR036409 APE_2400.1 APE_2406.1 IPR003439 ABC transporter-like APE_2406.1 IPR003593 AAA+ ATPase domain APE_2406.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2408.1 IPR003439 ABC transporter-like APE_2408.1 IPR003593 AAA+ ATPase domain APE_2408.1 IPR017871 ABC transporter, conserved site APE_2408.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2409 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2411.1 IPR012652 Thiamine-precursor transporter protein APE_2413 IPR001845 HTH ArsR-type DNA-binding domain APE_2413 IPR036388 APE_2413 APE_2413 IPR036390 APE_2413 APE_2414.1 IPR002528 Multi antimicrobial extrusion protein APE_2418.1 IPR012255 Electron transfer flavoprotein, beta subunit APE_2418.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2418.1 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal APE_2419 IPR001308 Electron transfer flavoprotein, alpha subunit APE_2419 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2419 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal APE_2419 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal APE_2419 IPR029035 DHS-like NAD/FAD-binding domain APE_2421 IPR006076 FAD dependent oxidoreductase APE_2421 IPR036188 APE_2421 APE_2423 IPR000192 Aminotransferase class V domain APE_2423 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_2423 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_2423 IPR015424 Pyridoxal phosphate-dependent transferase APE_2423 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site APE_2423 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase APE_2424 IPR002848 Translin APE_2424 IPR036081 APE_2424 APE_2425 IPR004422 GHMP kinase group 1 APE_2425 IPR013750 GHMP kinase, C-terminal domain APE_2425 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_2425 IPR020568 Ribosomal protein S5 domain 2-type fold APE_2426.1 IPR006153 Cation/H+ exchanger APE_2426.1 IPR038770 APE_2426.1 APE_2430.1 IPR013766 Thioredoxin domain APE_2430.1 IPR036249 APE_2430.1 APE_2431.1 IPR004114 THUMP APE_2433.1 IPR005841 Alpha-D-phosphohexomutase superfamily APE_2433.1 IPR005843 Alpha-D-phosphohexomutase, C-terminal APE_2433.1 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I APE_2433.1 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II APE_2433.1 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III APE_2433.1 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III APE_2433.1 IPR016066 Alpha-D-phosphohexomutase, conserved site APE_2433.1 IPR036900 APE_2433.1 APE_2435 IPR009198 Uncharacterised conserved protein UCP014484, transmembrane APE_2436 IPR006680 Amidohydrolase 1 APE_2436 IPR032466 APE_2436 APE_2436a IPR003033 SCP2 sterol-binding domain APE_2436a IPR036527 APE_2436a APE_2437.1 IPR002915 DeoC/FbaB/ lacD aldolase APE_2437.1 IPR011343 Deoxyribose-phosphate aldolase APE_2437.1 IPR013785 Aldolase-type TIM barrel APE_2437.1 IPR028581 Deoxyribose-phosphate aldolase type I APE_2438 IPR005236 Dihydropteroate synthase-related protein synthase-related protein APE_2438 IPR011005 Dihydropteroate synthase-like APE_2439 IPR006204 GHMP kinase N-terminal domain APE_2439 IPR006205 Mevalonate kinase APE_2439 IPR013750 GHMP kinase, C-terminal domain APE_2439 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_2439 IPR020568 Ribosomal protein S5 domain 2-type fold APE_2439 IPR022937 Mevalonate kinase, archaeal APE_2439 IPR036554 APE_2439 APE_2441.1 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain APE_2441.1 IPR011042 Six-bladed beta-propeller, TolB-like APE_2441.1 IPR011659 WD40-like Beta Propeller APE_2441.1 IPR029058 Alpha/Beta hydrolase fold APE_2443.1 IPR000812 Transcription factor TFIIB APE_2443.1 IPR013150 Transcription factor TFIIB, cyclin-like domain APE_2443.1 IPR013763 Cyclin-like APE_2443.1 IPR023484 Transcription initiation factor TFIIB, archaea APE_2443.1 IPR023486 Transcription factor TFIIB, conserved site APE_2443.1 IPR036915 APE_2443.1 APE_2446 IPR007841 Uncharacterised protein family UPF0210 APE_2446 IPR014537 Uncharacterised conserved protein UCP027893 APE_2447 IPR008457 Copper resistance D APE_2448 IPR005137 Photosystem I BtpA, assembly APE_2448 IPR011060 Ribulose-phosphate binding barrel APE_2450.1 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal APE_2450.1 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal APE_2450.1 IPR011356 Leucine aminopeptidase/peptidase B APE_2450.1 IPR023042 Peptidase M17, leucine aminopeptidase APE_2452 IPR001674 GMP synthase, C-terminal APE_2452 IPR004739 GMP synthase, N-terminal APE_2452 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2452 IPR017926 Glutamine amidotransferase APE_2452 IPR022310 NAD/GMP synthase APE_2452 IPR022955 GMP synthase APE_2452 IPR029062 Class I glutamine amidotransferase-like APE_2455.1 IPR006685 Mechanosensitive ion channel MscS APE_2456.1 IPR003148 Regulator of K+ conductance, N-terminal APE_2456.1 IPR006036 Potassium uptake protein TrkA APE_2456.1 IPR036291 APE_2456.1 APE_2456.1 IPR036721 APE_2456.1 APE_2458 IPR000941 Enolase APE_2458 IPR020809 Enolase, conserved site APE_2458 IPR020810 Enolase, C-terminal APE_2458 IPR020811 Enolase, N-terminal APE_2458 IPR029017 Enolase N-terminal domain-like APE_2458 IPR036849 APE_2458 APE_2460.1 IPR012206 Ferredoxin-like, FixX APE_2461.1 IPR002305 Aminoacyl-tRNA synthetase, class Ic APE_2461.1 IPR002306 Tryptophan-tRNA ligase APE_2461.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2461.1 IPR020653 Tryptophan-tRNA ligase, archaea APE_2462.1 IPR012932 Vitamin K epoxide reductase APE_2462.1 IPR038354 APE_2462.1 APE_2464.1 IPR003714 PhoH-like protein APE_2464.1 IPR004044 K Homology domain, type 2 APE_2464.1 IPR015946 K homology domain-like, alpha/beta APE_2464.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2465.1 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p APE_2465.1 IPR023267 RNA (C5-cytosine) methyltransferase APE_2465.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_2465.1 IPR035926 APE_2465.1 APE_2466 IPR011701 Major facilitator superfamily APE_2466 IPR036259 APE_2466 APE_2468.1 IPR004165 Coenzyme A transferase family I APE_2468.1 IPR014388 3-oxoacid CoA-transferase APE_2468.1 IPR037171 APE_2468.1 APE_2470 IPR004977 Ribosomal protein S25 APE_2470 IPR036388 APE_2470 APE_2470 IPR036390 APE_2470 APE_2472.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2473.1 IPR004843 Calcineurin-like phosphoesterase domain, apaH type APE_2473.1 IPR029052 Metallo-dependent phosphatase-like APE_2474.1 IPR003338 CDC48, N-terminal subdomain APE_2474.1 IPR003593 AAA+ ATPase domain APE_2474.1 IPR003959 ATPase, AAA-type, core APE_2474.1 IPR003960 ATPase, AAA-type, conserved site APE_2474.1 IPR004201 CDC48, domain 2 APE_2474.1 IPR005938 AAA ATPase, CDC48 family APE_2474.1 IPR009010 Aspartate decarboxylase-like domain APE_2474.1 IPR015415 Vps4 oligomerisation, C-terminal APE_2474.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2474.1 IPR029067 CDC48 domain 2-like APE_2480.1 IPR004542 Translation elongation factor EF1B, beta chain, archaeal APE_2480.1 IPR014038 Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange APE_2480.1 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APE_2480.1 IPR036219 APE_2480.1 APE_2480a IPR011668 Domain of unknown function DUF1610 APE_2481.1 IPR009927 Protein of unknown function DUF1464 APE_2484.1 IPR013078 Histidine phosphatase superfamily, clade-1 APE_2484.1 IPR029033 Histidine phosphatase superfamily APE_2485.1 IPR002798 Protein of unknown function DUF95, transmembrane APE_2486.1 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 APE_2486.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like APE_2489.1 IPR000644 CBS domain APE_2490.1 IPR004923 Iron permease FTR1/Fip1/EfeU APE_2493.1 IPR006638 Elongator protein 3/MiaB/NifB APE_2493.1 IPR007197 Radical SAM APE_2493.1 IPR023404 Radical SAM, alpha/beta horseshoe APE_2495.1 IPR001310 Histidine triad (HIT) protein APE_2495.1 IPR019808 Histidine triad, conserved site APE_2495.1 IPR036265 APE_2495.1 APE_2496.1 IPR013766 Thioredoxin domain APE_2496.1 IPR017937 Thioredoxin, conserved site APE_2496.1 IPR036249 APE_2496.1 APE_2497 IPR002771 Multiple antibiotic resistance (MarC)-related APE_2499.1 IPR006683 Thioesterase superfamily APE_2499.1 IPR029069 HotDog domain APE_2500.1 IPR004869 Membrane transport protein, MMPL domain APE_2502.1 IPR006680 Amidohydrolase 1 APE_2502.1 IPR032466 APE_2502.1 APE_2503.1 IPR002347 Glucose/ribitol dehydrogenase APE_2503.1 IPR036291 APE_2503.1 APE_2505 IPR001845 HTH ArsR-type DNA-binding domain APE_2505 IPR002831 Transcription regulator TrmB, N-terminal APE_2505 IPR036388 APE_2505 APE_2505 IPR036390 APE_2505 APE_2507.1 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APE_2507.1 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APE_2507.1 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APE_2507.1 IPR036291 APE_2507.1 APE_2509 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APE_2509 IPR012000 Thiamine pyrophosphate enzyme, central domain APE_2509 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain APE_2509 IPR029035 DHS-like NAD/FAD-binding domain APE_2509 IPR029061 Thiamin diphosphate-binding fold APE_2512 IPR000412 ABC-2 transporter APE_2512 IPR013525 ABC-2 type transporter APE_2514 IPR000412 ABC-2 transporter APE_2514 IPR013525 ABC-2 type transporter APE_2516 IPR003439 ABC transporter-like APE_2516 IPR003593 AAA+ ATPase domain APE_2516 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA APE_2516 IPR025302 Domain of unknown function DUF4162 APE_2516 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2517.1 IPR001845 HTH ArsR-type DNA-binding domain APE_2517.1 IPR002577 Helix-turn-helix, HxlR type APE_2517.1 IPR036388 APE_2517.1 APE_2517.1 IPR036390 APE_2517.1 APE_2519.1 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APE_2519.1 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APE_2520.1 IPR015942 Asp/Glu/hydantoin racemase APE_2520.1 IPR026286 Maleate isomerase/Arylmalonate decarboxylase APE_2521.1 IPR000709 Leu/Ile/Val-binding protein APE_2521.1 IPR028081 Leucine-binding protein domain APE_2521.1 IPR028082 Periplasmic binding protein-like I APE_2522.1 IPR001851 ABC transporter, permease APE_2523.1 IPR001851 ABC transporter, permease APE_2524.1 IPR003439 ABC transporter-like APE_2524.1 IPR003593 AAA+ ATPase domain APE_2524.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2524.1 IPR032823 APE_2524.1 APE_2526 IPR003439 ABC transporter-like APE_2526 IPR003593 AAA+ ATPase domain APE_2526 IPR017871 ABC transporter, conserved site APE_2526 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2528.1 IPR002821 Hydantoinase/oxoprolinase APE_2528.1 IPR008040 Hydantoinaseoxoprolinase, N-terminal APE_2530.1 IPR003692 Hydantoinase B/oxoprolinase APE_2533.1 IPR004879 Domain of unknown function DUF255 APE_2533.1 IPR008928 Six-hairpin glycosidase-like APE_2533.1 IPR012341 Six-hairpin glycosidase APE_2533.1 IPR024705 Spermatogenesis-associated protein 20 APE_2533.1 IPR036249 APE_2533.1 APE_2535.1 IPR009339 Protein of unknown function DUF998 APE_2537.1 IPR000620 Drug/metabolite transporter APE_2538 IPR018461 Na+/H+ antiporter, NhaC-like APE_2540.1 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain APE_2540.1 IPR036754 APE_2540.1 APE_2542.1 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APE_2545.1 IPR011852 TRAP transporter solute receptor, TAXI family APE_2546 IPR001468 Indole-3-glycerol phosphate synthase, conserved site APE_2546 IPR011060 Ribulose-phosphate binding barrel APE_2546 IPR013785 Aldolase-type TIM barrel APE_2546 IPR013798 Indole-3-glycerol phosphate synthase APE_2547 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain APE_2547 IPR011060 Ribulose-phosphate binding barrel APE_2547 IPR013785 Aldolase-type TIM barrel APE_2548 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_2548 IPR006316 Tryptophan synthase, beta chain-like APE_2548 IPR006653 Tryptophan synthase, beta chain, conserved site APE_2548 IPR023026 Tryptophan synthase beta chain/beta chain-like APE_2548 IPR036052 APE_2548 APE_2550 IPR002028 Tryptophan synthase, alpha chain APE_2550 IPR011060 Ribulose-phosphate binding barrel APE_2550 IPR013785 Aldolase-type TIM barrel APE_2550 IPR018204 Tryptophan synthase, alpha chain, active site APE_2551 IPR000312 Glycosyl transferase, family 3 APE_2551 IPR005940 Anthranilate phosphoribosyl transferase APE_2551 IPR017459 Glycosyl transferase family 3, N-terminal domain APE_2551 IPR035902 APE_2551 APE_2551 IPR036320 APE_2551 APE_2553.1 IPR005801 ADC synthase APE_2553.1 IPR015890 Chorismate binding, C-terminal APE_2553.1 IPR019999 Anthranilate synthase component I - like APE_2555 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain APE_2555 IPR017926 Glutamine amidotransferase APE_2555 IPR029062 Class I glutamine amidotransferase-like APE_2556.1 IPR006656 Molybdopterin oxidoreductase APE_2556.1 IPR006657 Molydopterin dinucleotide-binding domain APE_2556.1 IPR009010 Aspartate decarboxylase-like domain APE_2556.1 IPR014066 Arsenite oxidase, large subunit APE_2563 IPR014067 Arsenite oxidase, small subunit APE_2563 IPR017941 Rieske [2Fe-2S] iron-sulphur domain APE_2563 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APE_2563 IPR036922 APE_2563 APE_2565.1 IPR000485 AsnC-type HTH domain APE_2565.1 IPR019888 Transcription regulator AsnC-type APE_2565.1 IPR036388 APE_2565.1 APE_2565.1 IPR036390 APE_2565.1 APE_2568.1 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APE_2568.1 IPR036249 APE_2568.1 APE_2570.1 IPR002145 Ribbon-helix-helix protein, copG APE_2570.1 IPR010985 Ribbon-helix-helix APE_2570.1 IPR014864 Transcription factor, NikR, nickel binding C-terminal APE_2570.1 IPR027271 APE_2570.1 APE_2571.1 IPR001757 Cation-transporting P-type ATPase APE_2571.1 IPR008250 P-type ATPase, A domain APE_2571.1 IPR018303 P-type ATPase, phosphorylation site APE_2571.1 IPR023214 HAD-like domain APE_2571.1 IPR023298 P-type ATPase, transmembrane domain APE_2571.1 IPR023299 P-type ATPase, cytoplasmic domain N APE_2571.1 IPR027256 Cation-transporting P-type ATPase, subfamily IB APE_2571.1 IPR036412 APE_2571.1 APE_2575 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site APE_2575 IPR004839 Aminotransferase, class I/classII APE_2575 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 APE_2575 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 APE_2575 IPR015424 Pyridoxal phosphate-dependent transferase APE_2577.1 IPR007197 Radical SAM APE_2578 IPR000412 ABC-2 transporter APE_2578 IPR013525 ABC-2 type transporter APE_2579.1 IPR003439 ABC transporter-like APE_2579.1 IPR003593 AAA+ ATPase domain APE_2579.1 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA APE_2579.1 IPR017871 ABC transporter, conserved site APE_2579.1 IPR025302 Domain of unknown function DUF4162 APE_2579.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2580 IPR002563 Flavin reductase-like, FMN-binding APE_2580 IPR012349 FMN-binding split barrel APE_2583.1 IPR001991 Sodium:dicarboxylate symporter APE_2583.1 IPR018107 Sodium:dicarboxylate symporter, conserved site APE_2583.1 IPR036458 APE_2583.1 APE_2585 IPR001279 Beta-lactamase-like APE_2585 IPR036866 APE_2585 APE_2586.1 IPR001851 ABC transporter, permease APE_2587.1 IPR001851 ABC transporter, permease APE_2588 IPR003439 ABC transporter-like APE_2588 IPR003593 AAA+ ATPase domain APE_2588 IPR017871 ABC transporter, conserved site APE_2588 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2592.1 IPR003760 Basic membrane lipoprotein APE_2592.1 IPR028082 Periplasmic binding protein-like I APE_2592a IPR036868 APE_2592a APE_2595.1 IPR001307 Thiosulphate sulfurtransferase, conserved site APE_2595.1 IPR001763 Rhodanese-like domain APE_2595.1 IPR036873 APE_2595.1 APE_2598 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site APE_2598 IPR007197 Radical SAM APE_2598 IPR013785 Aldolase-type TIM barrel APE_2604 IPR000873 AMP-dependent synthetase/ligase APE_2604 IPR011904 Acetate-CoA ligase APE_2604 IPR020459 AMP-binding APE_2604 IPR020845 AMP-binding, conserved site APE_2604 IPR025110 AMP-binding enzyme C-terminal domain APE_2604a.1 IPR000873 AMP-dependent synthetase/ligase APE_2604a.1 IPR032387 APE_2604a.1 APE_2605.1 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_2605.1 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_2607 IPR005614 NrfD family APE_2610 IPR006656 Molybdopterin oxidoreductase APE_2610 IPR006657 Molydopterin dinucleotide-binding domain APE_2610 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain APE_2610 IPR009010 Aspartate decarboxylase-like domain APE_2612.1 IPR020945 DMSO/Nitrate reductase chaperone APE_2612.1 IPR036411 APE_2612.1 APE_2615.1 IPR011701 Major facilitator superfamily APE_2615.1 IPR036259 APE_2615.1 APE_2616 IPR002716 PIN domain APE_2616 IPR029060 PIN domain-like APE_2616a IPR008203 Uncharacterised protein family UPF0165 APE_2616a IPR024069 AF2212-like domain APE_2617.1 IPR002716 PIN domain APE_2617.1 IPR029060 PIN domain-like APE_2617a IPR007159 AbrB-like domain APE_2617a IPR037914 APE_2617a APE_2617b IPR002716 PIN domain APE_2617b IPR029060 PIN domain-like APE_2617c IPR008203 Uncharacterised protein family UPF0165 APE_2617c IPR024069 AF2212-like domain APE_2617e.1 IPR007367 Protein of unknown function DUF433 APE_2617e.1 IPR009057 Homeodomain-like APE_2617e.1 IPR036388 APE_2617e.1