APE_0011.1 SM01133 APE_0011.1 APE_0043.1 SM00382 ATPases associated with a variety of cellular activities APE_0050 SM00382 ATPases associated with a variety of cellular activities APE_0060.1 SM00530 Helix-turn-helix XRE-family like proteins APE_0063 SM00382 ATPases associated with a variety of cellular activities APE_0077 SM00852 Probable molybdopterin binding domain APE_0080.1 SM00382 ATPases associated with a variety of cellular activities APE_0082.1 SM00933 APE_0082.1 APE_0085.1 SM00481 DNA polymerase alpha chain like domain APE_0088.1 SM00966 SpoVT / AbrB like domain APE_0093.1 SM00966 SpoVT / AbrB like domain APE_0099 SM00486 DNA polymerase type-B family APE_0109.1 SM00933 APE_0109.1 APE_0113a SM01377 APE_0113a APE_0115.1 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APE_0115.1 SM00484 Xeroderma pigmentosum G I-region APE_0115.1 SM00485 Xeroderma pigmentosum G N-region APE_0116.1 SM01022 APE_0116.1 APE_0119 SM00382 ATPases associated with a variety of cellular activities APE_0127 SM00382 ATPases associated with a variety of cellular activities APE_0134.1 SM00893 Electron transfer flavoprotein domain APE_0142 SM00529 Helix-turn-helix diphteria tox regulatory element APE_0150.1 SM00478 endonuclease III APE_0150.1 SM00525 APE_0150.1 APE_0152.1 SM01074 CDC6, C terminal APE_0171.1 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APE_0177 SM00852 Probable molybdopterin binding domain APE_0181 SM00849 Metallo-beta-lactamase superfamily APE_0181 SM01027 Beta-Casp domain APE_0182.1 SM01152 APE_0182.1 APE_0188.1 SM00350 minichromosome maintenance proteins APE_0188.1 SM00382 ATPases associated with a variety of cellular activities APE_0191.1 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APE_0191.1 SM00382 ATPases associated with a variety of cellular activities APE_0191.1 SM00487 DEAD-like helicases superfamily APE_0191.1 SM00490 helicase superfamily c-terminal domain APE_0197.1 SM00530 Helix-turn-helix XRE-family like proteins APE_0198.1 SM01407 APE_0198.1 APE_0209.1 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APE_0218 SM01382 APE_0218 APE_0218 SM01383 APE_0218 APE_0219 SM00382 ATPases associated with a variety of cellular activities APE_0231 SM00116 Domain in cystathionine beta-synthase and other proteins. APE_0233 SM00116 Domain in cystathionine beta-synthase and other proteins. APE_0234 SM00116 Domain in cystathionine beta-synthase and other proteins. APE_0249.1 SM00729 Elongator protein 3, MiaB family, Radical SAM APE_0252 SM00729 Elongator protein 3, MiaB family, Radical SAM APE_0256a.1 SM01389 APE_0256a.1 APE_0257 SM00316 Ribosomal protein S1-like RNA-binding domain APE_0266.1 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain APE_0267 SM00116 Domain in cystathionine beta-synthase and other proteins. APE_0273 SM00670 Large family of predicted nucleotide-binding domains APE_0278 SM00670 Large family of predicted nucleotide-binding domains APE_0288 SM00347 helix_turn_helix multiple antibiotic resistance protein APE_0290.1 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APE_0293 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APE_0300.1 SM00382 ATPases associated with a variety of cellular activities APE_0301.1 SM00382 ATPases associated with a variety of cellular activities APE_0304.1 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins APE_0322.1 SM00488 APE_0322.1 APE_0322.1 SM00491 APE_0322.1 APE_0326.1 SM00382 ATPases associated with a variety of cellular activities APE_0330.1 SM00849 Metallo-beta-lactamase superfamily APE_0348 SM01416 APE_0348 APE_0349 SM01393 APE_0349 APE_0356.1 SM00363 S4 RNA-binding domain APE_0358 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APE_0359 SM01374 APE_0359 APE_0362 SM00538 A domain found in a protein subunit of human RNase MRP and RNase P ribonucleoprotein complexes and archaeal proteins. APE_0363 SM00322 K homology RNA-binding domain APE_0372.1 SM00382 ATPases associated with a variety of cellular activities APE_0381.1 SM00966 SpoVT / AbrB like domain APE_0382 SM00849 Metallo-beta-lactamase superfamily APE_0383.1 SM00116 Domain in cystathionine beta-synthase and other proteins. APE_0392 SM00919 Malic enzyme, NAD binding domain APE_0392 SM01274 APE_0392 APE_0405.1 SM00382 ATPases associated with a variety of cellular activities APE_0413 SM00487 DEAD-like helicases superfamily APE_0413 SM00490 helicase superfamily c-terminal domain APE_0427.1 SM00986 Uracil DNA glycosylase superfamily APE_0427.1 SM00987 UreE urease accessory protein, C-terminal domain APE_0436.1 SM00316 Ribosomal protein S1-like RNA-binding domain APE_0442.1 SM00440 C2C2 Zinc finger APE_0442.1 SM00661 RNA polymerase subunit 9 APE_0450 SM00852 Probable molybdopterin binding domain APE_0459 SM00419 helix_turn_helix, cAMP Regulatory protein APE_0462 SM00382 ATPases associated with a variety of cellular activities APE_0462 SM00670 Large family of predicted nucleotide-binding domains APE_0465.1 SM00981 APE_0465.1 APE_0471.1 SM00382 ATPases associated with a variety of cellular activities APE_0473.1 SM00966 SpoVT / AbrB like domain APE_0475.1 SM00382 ATPases associated with a variety of cellular activities APE_0475.1 SM01074 CDC6, C terminal APE_0478.1 SM00729 Elongator protein 3, MiaB family, Radical SAM APE_0522.1 SM00849 Metallo-beta-lactamase superfamily APE_0522.1 SM01027 Beta-Casp domain APE_0525.1 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase APE_0525a SM00651 snRNP Sm proteins APE_0532.1 SM00382 ATPases associated with a variety of cellular activities APE_0553 SM00650 Ribosomal RNA adenine dimethylases APE_0557 SM00981 APE_0557 APE_0562a SM00830 Chorismate mutase type II APE_0583 SM00861 Transketolase, pyrimidine binding domain APE_0624.1 SM00996 S-adenosyl-L-homocysteine hydrolase APE_0624.1 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APE_0636 SM00849 Metallo-beta-lactamase superfamily APE_0689.1 SM01329 APE_0689.1 APE_0695.1 SM00382 ATPases associated with a variety of cellular activities APE_0702.1 SM00470 ParB-like nuclease domain APE_0706.1 SM00387 Histidine kinase-like ATPases APE_0708.1 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APE_0712.1 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APE_0745.1 SM00306 Hint (Hedgehog/Intein) domain N-terminal region APE_0748a SM00652 eukaryotic translation initiation factor 1A APE_0751 SM00090 RIO-like kinase APE_0754.1 SM00322 K homology RNA-binding domain APE_0760.1 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain APE_0777 SM00156 Protein phosphatase 2A homologues, catalytic domain. APE_0778 SM00530 Helix-turn-helix XRE-family like proteins APE_0785.1 SM00116 Domain in cystathionine beta-synthase and other proteins. APE_0787.1 SM00385 domain present in cyclins, TFIIB and Retinoblastoma APE_0875.1 SM00478 endonuclease III APE_0875.1 SM00525 APE_0875.1 APE_0880 SM00382 ATPases associated with a variety of cellular activities APE_0892.1 SM00382 ATPases associated with a variety of cellular activities APE_0903.1 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APE_0914 SM01409 APE_0914 APE_0919 SM00382 ATPases associated with a variety of cellular activities APE_0921 SM00382 ATPases associated with a variety of cellular activities APE_0944.1 SM00382 ATPases associated with a variety of cellular activities APE_0952.1 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APE_0957a SM00651 snRNP Sm proteins APE_0960 SM00382 ATPases associated with a variety of cellular activities APE_0960 SM00745 Microtubule Interacting and Trafficking molecule domain APE_0974.1 SM00116 Domain in cystathionine beta-synthase and other proteins. APE_0981.1 SM00382 ATPases associated with a variety of cellular activities APE_1007a SM00661 RNA polymerase subunit 9 APE_1023.1 SM01130 APE_1023.1 APE_1026.1 SM00382 ATPases associated with a variety of cellular activities APE_1031.1 SM00327 von Willebrand factor (vWF) type A domain APE_1035.1 SM00382 ATPases associated with a variety of cellular activities APE_1055.1 SM00382 ATPases associated with a variety of cellular activities APE_1072.1 SM00881 CoA binding domain APE_1073 SM00487 DEAD-like helicases superfamily APE_1073 SM00490 helicase superfamily c-terminal domain APE_1081.1 SM00382 ATPases associated with a variety of cellular activities APE_1081.1 SM00962 SRP54-type protein, GTPase domain APE_1081.1 SM00963 SRP54-type protein, helical bundle domain APE_1085 SM00654 translation initiation factor 6 APE_1087.1 SM01380 APE_1087.1 APE_1090 SM01413 APE_1090 APE_1091 SM01103 APE_1091 APE_1098 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase APE_1102 SM00670 Large family of predicted nucleotide-binding domains APE_1117 SM00849 Metallo-beta-lactamase superfamily APE_1119.1 SM00382 ATPases associated with a variety of cellular activities APE_1132a SM01402 APE_1132a APE_1139 SM01386 APE_1139 APE_1139 SM01387 APE_1139 APE_1143 SM00859 Semialdehyde dehydrogenase, NAD binding domain APE_1154.1 SM01397 APE_1154.1 APE_1156.1 SM00981 APE_1156.1 APE_1158.1 SM00729 Elongator protein 3, MiaB family, Radical SAM APE_1232 SM00487 DEAD-like helicases superfamily APE_1232 SM00490 helicase superfamily c-terminal domain APE_1253 SM00382 ATPases associated with a variety of cellular activities APE_1255.1 SM00382 ATPases associated with a variety of cellular activities APE_1260 SM00849 Metallo-beta-lactamase superfamily APE_1272.1 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain APE_1281 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APE_1288.1 SM00926 Molybdopterin oxidoreductase Fe4S4 domain APE_1297 SM00887 Ethylbenzene dehydrogenase APE_1301.1 SM00382 ATPases associated with a variety of cellular activities APE_1308 SM00382 ATPases associated with a variety of cellular activities APE_1317 SM00382 ATPases associated with a variety of cellular activities APE_1340.1 SM00382 ATPases associated with a variety of cellular activities APE_1340.1 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APE_1340.1 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APE_1340.1 SM00487 DEAD-like helicases superfamily APE_1340.1 SM00490 helicase superfamily c-terminal domain APE_1340.1 SM00493 APE_1340.1 APE_1353.1 SM00487 DEAD-like helicases superfamily APE_1353.1 SM00490 helicase superfamily c-terminal domain APE_1367 SM00382 ATPases associated with a variety of cellular activities APE_1367 SM01072 Cell division protein 48 (CDC48) domain 2 APE_1367 SM01073 Cell division protein 48 (CDC48) N-terminal domain APE_1376.1 SM00382 ATPases associated with a variety of cellular activities APE_1376.1 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APE_1376.1 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APE_1376.1 SM00487 DEAD-like helicases superfamily APE_1376.1 SM00493 APE_1376.1 APE_1380.1 SM00382 ATPases associated with a variety of cellular activities APE_1386.1 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APE_1399 SM00382 ATPases associated with a variety of cellular activities APE_1402.1 SM00382 ATPases associated with a variety of cellular activities APE_1432 SM00838 Elongation factor G C-terminus APE_1432 SM00889 Elongation factor G, domain IV APE_1436.1 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APE_1436.1 SM00891 ERCC4 domain APE_1443.1 SM00879 APE_1443.1 APE_1448 SM00316 Ribosomal protein S1-like RNA-binding domain APE_1448 SM00322 K homology RNA-binding domain APE_1449 SM00948 Proteasome subunit A N-terminal signature Add an annotation APE_1452 SM01384 APE_1452 APE_1458a SM00344 helix_turn_helix ASNC type APE_1462 SM00859 Semialdehyde dehydrogenase, NAD binding domain APE_1507.1 SM01240 APE_1507.1 APE_1517a SM01357 APE_1517a APE_1522.1 SM00382 ATPases associated with a variety of cellular activities APE_1524.1 SM00382 ATPases associated with a variety of cellular activities APE_1530.1 SM00729 Elongator protein 3, MiaB family, Radical SAM APE_1533.1 SM00653 domain present in translation initiation factor eIF2B and eIF5 APE_1548.1 SM00382 ATPases associated with a variety of cellular activities APE_1552 SM00116 Domain in cystathionine beta-synthase and other proteins. APE_1557.1 SM00829 Enoylreductase APE_1559.1 SM00849 Metallo-beta-lactamase superfamily APE_1559a SM00704 CDGSH-type zinc finger. Function unknown. APE_1576 SM00382 ATPases associated with a variety of cellular activities APE_1578 SM00382 ATPases associated with a variety of cellular activities APE_1602.1 SM00090 RIO-like kinase APE_1602a SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APE_1635.1 SM00382 ATPases associated with a variety of cellular activities APE_1648.1 SM00506 Appr-1"-p processing enzyme APE_1652 SM00729 Elongator protein 3, MiaB family, Radical SAM APE_1655 SM00729 Elongator protein 3, MiaB family, Radical SAM APE_1657.1 SM01007 Class II Aldolase and Adducin N-terminal domain APE_1660.1 SM00881 CoA binding domain APE_1666 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APE_1674 SM00861 Transketolase, pyrimidine binding domain APE_1702 SM00382 ATPases associated with a variety of cellular activities APE_1718 SM00845 GatB domain APE_1727.1 SM00756 APE_1727.1 APE_1732 SM00382 ATPases associated with a variety of cellular activities APE_1735 SM00382 ATPases associated with a variety of cellular activities APE_1735 SM00962 SRP54-type protein, GTPase domain APE_1735 SM00963 SRP54-type protein, helical bundle domain APE_1739.1 SM00363 S4 RNA-binding domain APE_1739.1 SM01390 APE_1739.1 APE_1744.1 SM00662 RNA polymerases D APE_1756 SM00836 DALR anticodon binding domain APE_1756 SM01016 Arginyl tRNA synthetase N terminal dom APE_1761.1 SM01118 APE_1761.1 APE_1794 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APE_1794 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APE_1797 SM00873 B3/4 domain APE_1800.1 SM01194 APE_1800.1 APE_1829 SM00382 ATPases associated with a variety of cellular activities APE_1834.1 SM01400 APE_1834.1 APE_1838.1 SM00116 Domain in cystathionine beta-synthase and other proteins. APE_1842 SM01403 APE_1842 APE_1850 SM00322 K homology RNA-binding domain APE_1853.1 SM00663 RNA polymerase I subunit A N-terminus APE_1865.1 SM00729 Elongator protein 3, MiaB family, Radical SAM APE_1874.1 SM00729 Elongator protein 3, MiaB family, Radical SAM APE_1891.1 SM00382 ATPases associated with a variety of cellular activities APE_1893.1 SM00062 Bacterial periplasmic substrate-binding proteins APE_1898 SM00382 ATPases associated with a variety of cellular activities APE_1911.1 SM00382 ATPases associated with a variety of cellular activities APE_1934.1 SM00382 ATPases associated with a variety of cellular activities APE_1949.1 SM00709 Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins. APE_1980.1 SM00852 Probable molybdopterin binding domain APE_1988.1 SM01194 APE_1988.1 APE_2004.1 SM00531 Transcription initiation factor IIE APE_2011.1 SM00530 Helix-turn-helix XRE-family like proteins APE_2012 SM00382 ATPases associated with a variety of cellular activities APE_2060.1 SM00382 ATPases associated with a variety of cellular activities APE_2084.1 SM00966 SpoVT / AbrB like domain APE_2085.1 SM01376 APE_2085.1 APE_2096.1 SM00493 APE_2096.1 APE_2098.1 SM00486 DNA polymerase type-B family APE_2104.1 SM00518 AP endonuclease family 2 APE_2109 SM00729 Elongator protein 3, MiaB family, Radical SAM APE_2142.1 SM01230 APE_2142.1 APE_2144.1 SM00487 DEAD-like helicases superfamily APE_2144.1 SM00490 helicase superfamily c-terminal domain APE_2153.1 SM00244 prohibitin homologues APE_2156.1 SM00849 Metallo-beta-lactamase superfamily APE_2166 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APE_2174 SM00649 Ribosomal protein L11/L12 APE_2176.1 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APE_2176.1 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APE_2178.1 SM00116 Domain in cystathionine beta-synthase and other proteins. APE_2188.1 SM00487 DEAD-like helicases superfamily APE_2188.1 SM00490 helicase superfamily c-terminal domain APE_2196 SM01206 APE_2196 APE_2199.1 SM00931 NOSIC (NUC001) domain APE_2200 SM00870 APE_2200 APE_2202 SM00845 GatB domain APE_2216.1 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APE_2219 SM01092 CO dehydrogenase flavoprotein C-terminal domain APE_2220.1 SM00382 ATPases associated with a variety of cellular activities APE_2221.1 SM00327 von Willebrand factor (vWF) type A domain APE_2239.1 SM00829 Enoylreductase APE_2261.1 SM00382 ATPases associated with a variety of cellular activities APE_2263.1 SM00382 ATPases associated with a variety of cellular activities APE_2265.1 SM00849 Metallo-beta-lactamase superfamily APE_2272.1 SM00382 ATPases associated with a variety of cellular activities APE_2284a SM00746 metallochaperone-like domain APE_2300.1 SM01004 Delta-aminolevulinic acid dehydratase APE_2305 SM00873 B3/4 domain APE_2305 SM00874 tRNA synthetase B5 domain APE_2328 SM00946 Prolyl-tRNA synthetase, C-terminal APE_2344.1 SM00729 Elongator protein 3, MiaB family, Radical SAM APE_2348 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APE_2359.1 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APE_2365.1 SM00670 Large family of predicted nucleotide-binding domains APE_2371.1 SM01405 APE_2371.1 APE_2377 SM00562 APE_2377 APE_2379a SM00746 metallochaperone-like domain APE_2406.1 SM00382 ATPases associated with a variety of cellular activities APE_2408.1 SM00382 ATPases associated with a variety of cellular activities APE_2418.1 SM00893 Electron transfer flavoprotein domain APE_2419 SM00893 Electron transfer flavoprotein domain APE_2437.1 SM01133 APE_2437.1 APE_2443.1 SM00385 domain present in cyclins, TFIIB and Retinoblastoma APE_2458 SM01192 APE_2458 APE_2458 SM01193 APE_2458 APE_2462.1 SM00756 APE_2462.1 APE_2468.1 SM00882 Coenzyme A transferase APE_2474.1 SM00382 ATPases associated with a variety of cellular activities APE_2474.1 SM01072 Cell division protein 48 (CDC48) domain 2 APE_2474.1 SM01073 Cell division protein 48 (CDC48) N-terminal domain APE_2480.1 SM00888 EF-1 guanine nucleotide exchange domain APE_2484.1 SM00855 Phosphoglycerate mutase family APE_2489.1 SM00116 Domain in cystathionine beta-synthase and other proteins. APE_2493.1 SM00729 Elongator protein 3, MiaB family, Radical SAM APE_2503.1 SM00822 APE_2503.1 APE_2505 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APE_2516 SM00382 ATPases associated with a variety of cellular activities APE_2517.1 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APE_2524.1 SM00382 ATPases associated with a variety of cellular activities APE_2526 SM00382 ATPases associated with a variety of cellular activities APE_2565.1 SM00344 helix_turn_helix ASNC type APE_2579.1 SM00382 ATPases associated with a variety of cellular activities APE_2580 SM00903 Flavin reductase like domain APE_2585 SM00849 Metallo-beta-lactamase superfamily APE_2588 SM00382 ATPases associated with a variety of cellular activities APE_2595.1 SM00450 Rhodanese Homology Domain APE_2610 SM00926 Molybdopterin oxidoreductase Fe4S4 domain APE_2617.1 SM00670 Large family of predicted nucleotide-binding domains APE_2617a SM00966 SpoVT / AbrB like domain