locus-tag	class	description
OCAR_4002	COG0741	lytic transglycosylase activity
OCAR_4014	COG5489	Protein of unknown function (DUF736)
OCAR_4016	COG0793	Belongs to the peptidase S41A family
OCAR_4020	COG0789	Transcriptional regulator
OCAR_4024	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OCAR_4027	COG0431	NADPH-dependent FMN reductase
OCAR_4028	COG0798	PFAM Bile acid sodium symporter
OCAR_4031	COG0640	Transcriptional regulator
OCAR_4040	COG2003	Belongs to the UPF0758 family
OCAR_4042	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OCAR_4043	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OCAR_4045	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OCAR_4047	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
OCAR_4048	COG0069	glutamate synthase activity
OCAR_4063	COG0227	Belongs to the bacterial ribosomal protein bL28 family
OCAR_4073	COG4536	flavin adenine dinucleotide binding
OCAR_4074	COG4536	flavin adenine dinucleotide binding
OCAR_4075	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
OCAR_4076	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
OCAR_4078	COG4974	Belongs to the 'phage' integrase family
OCAR_4079	COG0825	malonyl-CoA metabolic process
OCAR_4080	COG3034	peptidoglycan biosynthetic process
OCAR_4082	COG0653	protein targeting
OCAR_4083	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OCAR_4085	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
OCAR_4086	COG0494	nUDIX hydrolase
OCAR_4087	COG2226	methyltransferase
OCAR_4088	COG1040	competence protein
OCAR_4089	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
OCAR_4090	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
OCAR_4093	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OCAR_4095	COG0527	aspartate kinase activity
OCAR_4097	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
OCAR_4098	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
OCAR_4099	COG2890	protein-(glutamine-N5) methyltransferase activity
OCAR_4102	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OCAR_4104	COG0154	amidase activity
OCAR_4108	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
OCAR_4110	COG5001	Diguanylate cyclase
OCAR_4110	COG3300	MHYT domain
OCAR_4114	COG0333	Belongs to the bacterial ribosomal protein bL32 family
OCAR_4115	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OCAR_4116	COG0142	geranyltranstransferase activity
OCAR_4119	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
OCAR_4120	COG0735	belongs to the Fur family
OCAR_4122	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
OCAR_4126	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OCAR_4127	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OCAR_4129	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
OCAR_4130	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
OCAR_4134	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
OCAR_4138	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OCAR_4139	COG1902	pentaerythritol trinitrate reductase activity
OCAR_4149	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OCAR_4156	COG0210	DNA helicase
OCAR_4160	COG3093	addiction module antidote protein HigA
OCAR_4161	COG0071	Belongs to the small heat shock protein (HSP20) family
OCAR_4163	COG0071	Belongs to the small heat shock protein (HSP20) family
OCAR_4171	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OCAR_4172	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OCAR_4175	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
OCAR_4176	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
OCAR_4177	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
OCAR_4178	COG2205	protein histidine kinase activity
OCAR_4180	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OCAR_4182	COG0583	DNA-binding transcription factor activity
OCAR_4183	COG2948	multi-organism process
OCAR_4186	COG3846	protein secretion by the type IV secretion system
OCAR_4189	COG3451	type IV secretory pathway VirB4
OCAR_4192	COG4962	Type ii secretion system protein e
OCAR_4197	COG0741	lytic transglycosylase activity
OCAR_4202	COG1192	Involved in chromosome partitioning
OCAR_4208	COG5489	Protein of unknown function (DUF736)
OCAR_4229	COG0431	NADPH-dependent FMN reductase
OCAR_4230	COG0798	PFAM Bile acid sodium symporter
OCAR_4234	COG4974	Belongs to the 'phage' integrase family
OCAR_4237	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OCAR_4237	COG3453	Protein conserved in bacteria
OCAR_4240	COG2151	metal-sulfur cluster biosynthetic enzyme
OCAR_4251	COG3794	PFAM blue (type 1) copper domain protein
OCAR_4255	COG1595	DNA-templated transcription, initiation
OCAR_4257	COG4191	Histidine kinase
OCAR_4259	COG2917	probably involved in intracellular septation
OCAR_4260	COG0552	protein localization to endoplasmic reticulum
OCAR_4261	COG0564	pseudouridine synthase activity
OCAR_4262	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OCAR_4263	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
OCAR_4267	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
OCAR_4268	COG0228	four-way junction DNA binding
OCAR_4269	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
OCAR_4270	COG0336	Belongs to the RNA methyltransferase TrmD family
OCAR_4271	COG0335	large ribosomal subunit rRNA binding
OCAR_4273	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
OCAR_4276	COG0066	3-isopropylmalate dehydratase activity
OCAR_4277	COG2301	Belongs to the HpcH HpaI aldolase family
OCAR_4278	COG0288	reversible hydration of carbon dioxide
OCAR_4279	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
OCAR_4283	COG0473	3-isopropylmalate dehydrogenase activity
OCAR_4284	COG0477	Major facilitator Superfamily
OCAR_4285	COG0318	PFAM AMP-dependent synthetase and ligase
OCAR_4286	COG0730	response to heat
OCAR_4294	COG0137	argininosuccinate synthase activity
OCAR_4295	COG0671	phosphoesterase, PA-phosphatase related
OCAR_4298	COG0820	rRNA (adenine-C2-)-methyltransferase activity
OCAR_4303	COG2154	pterin-4-alpha-carbinolamine dehydratase
OCAR_4305	COG1217	gtp-binding protein TYPA
OCAR_4307	COG1247	-acetyltransferase
OCAR_4308	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
OCAR_4309	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
OCAR_4310	COG1872	DUF167
OCAR_4314	COG4221	oxidoreductase activity
OCAR_4320	COG0583	DNA-binding transcription factor activity
OCAR_4327	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
OCAR_4328	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
OCAR_4330	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OCAR_4332	COG1376	ErfK ybiS ycfS ynhG family protein
OCAR_4337	COG0138	bifunctional purine biosynthesis protein purh
OCAR_4339	COG0405	Gamma-glutamyltransferase
OCAR_4342	COG0432	Pfam Uncharacterised protein family UPF0047
OCAR_4346	COG3118	belongs to the thioredoxin family
OCAR_4348	COG2835	tetraacyldisaccharide 4'-kinase activity
OCAR_4349	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
OCAR_4350	COG1946	Acyl-CoA thioesterase
OCAR_4351	COG0347	Belongs to the P(II) protein family
OCAR_4352	COG0004	ammonium transporteR
OCAR_4354	COG0436	Aminotransferase
OCAR_4355	COG1674	ftsk spoiiie
OCAR_4358	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
OCAR_4359	COG0745	RESPONSE REGULATOR receiver
OCAR_4361	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
OCAR_4362	COG3706	GGDEF domain
OCAR_4362	COG2203	Gaf domain
OCAR_4362	COG5001	Diguanylate cyclase
OCAR_4362	COG4251	negative regulation of phosphorylation
OCAR_4363	COG0495	leucyl-tRNA aminoacylation
OCAR_4369	COG0357	Ribosomal RNA small subunit methyltransferase G
OCAR_4370	COG0445	tRNA wobble uridine modification
OCAR_4372	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
OCAR_4373	COG1331	Highly conserved protein containing a thioredoxin domain
OCAR_4374	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OCAR_4375	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
OCAR_4379	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OCAR_4381	COG1396	sequence-specific DNA binding
OCAR_4382	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
OCAR_4384	COG1981	membrane
OCAR_4385	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
OCAR_4386	COG0424	maF-like protein
OCAR_4387	COG0237	dephospho-CoA kinase activity
OCAR_4388	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
OCAR_4389	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
OCAR_4391	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
OCAR_4393	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
OCAR_4394	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
OCAR_4395	COG0131	Imidazoleglycerol-phosphate dehydratase
OCAR_4397	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
OCAR_4398	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
OCAR_4399	COG0107	imidazoleglycerol-phosphate synthase activity
OCAR_4400	COG0140	phosphoribosyl-ATP diphosphatase activity
OCAR_4401	COG1072	(Pantothenic acid kinase))
OCAR_4407	COG0189	ligase activity
OCAR_4408	COG0792	nuclease activity
OCAR_4409	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
OCAR_4411	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OCAR_4412	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
OCAR_4413	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
OCAR_4414	COG1420	regulation of RNA biosynthetic process
OCAR_4415	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
OCAR_4417	COG0443	Heat shock 70 kDa protein
OCAR_4419	COG3963	phosphatidate phosphatase activity
OCAR_4421	COG0284	orotidine-5'-phosphate decarboxylase activity
OCAR_4422	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
OCAR_4423	COG0588	phosphoglycerate mutase activity
OCAR_4426	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
OCAR_4430	COG2267	carboxylic ester hydrolase activity
OCAR_4432	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OCAR_4434	COG0747	negative chemotaxis
OCAR_4435	COG0583	DNA-binding transcription factor activity
OCAR_4438	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OCAR_4438	COG0072	phenylalanine-tRNA ligase activity
OCAR_4439	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
OCAR_4440	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
OCAR_4441	COG0291	Belongs to the bacterial ribosomal protein bL35 family
OCAR_4442	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
OCAR_4447	COG1968	undecaprenyl-diphosphatase activity
OCAR_4450	COG3447	MASE1 domain protein
OCAR_4450	COG5002	protein histidine kinase activity
OCAR_4450	COG5001	Diguanylate cyclase
OCAR_4453	COG0058	SHG alpha-glucan phosphorylase activity
OCAR_4455	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OCAR_4457	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
OCAR_4458	COG1137	ATPase activity
OCAR_4459	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
OCAR_4460	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
OCAR_4461	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OCAR_4462	COG0129	dihydroxy-acid dehydratase activity
OCAR_4464	COG0071	Belongs to the small heat shock protein (HSP20) family
OCAR_4467	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
OCAR_4470	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
OCAR_4472	COG0539	negative regulation of cytoplasmic translation
OCAR_4473	COG0616	signal peptide processing
OCAR_4474	COG0776	regulation of translation
OCAR_4476	COG0135	phosphoribosylanthranilate isomerase activity
OCAR_4477	COG0133	tryptophan synthase activity
OCAR_4478	COG0159	tryptophan synthase activity
OCAR_4479	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
OCAR_4482	COG1074	ATP-dependent DNA helicase activity
OCAR_4484	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
OCAR_4486	COG3178	'Phosphotransferase
OCAR_4487	COG2205	protein histidine kinase activity
OCAR_4488	COG0756	dUTP diphosphatase activity
OCAR_4489	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
OCAR_4490	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
OCAR_4491	COG2226	methyltransferase
OCAR_4492	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
OCAR_4493	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OCAR_4497	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
OCAR_4499	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
OCAR_4501	COG0583	DNA-binding transcription factor activity
OCAR_4503	COG1185	polyribonucleotide nucleotidyltransferase activity
OCAR_4504	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
OCAR_4505	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
OCAR_4506	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
OCAR_4508	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
OCAR_4512	COG0779	Required for maturation of 30S ribosomal subunits
OCAR_4514	COG0220	tRNA (guanine-N7-)-methyltransferase activity
OCAR_4515	COG1396	sequence-specific DNA binding
OCAR_4517	COG0815	Transfers the fatty acyl group on membrane lipoproteins
OCAR_4518	COG1253	flavin adenine dinucleotide binding
OCAR_4519	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
OCAR_4520	COG1702	phosphate starvation-inducible protein PhoH
OCAR_4521	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OCAR_4523	COG0456	acetyltransferase
OCAR_4524	COG1214	PFAM Peptidase M22, glycoprotease
OCAR_4525	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
OCAR_4526	COG0180	Tryptophanyl-tRNA synthetase
OCAR_4527	COG0728	peptidoglycan biosynthetic process
OCAR_4528	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OCAR_4531	COG1741	Belongs to the pirin family
OCAR_4534	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
OCAR_4535	COG2852	Protein conserved in bacteria
OCAR_4538	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
OCAR_4540	COG0268	Binds directly to 16S ribosomal RNA
OCAR_4542	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OCAR_4545	COG0784	Response regulator, receiver
OCAR_4545	COG4191	Histidine kinase
OCAR_4547	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
OCAR_4548	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OCAR_4552	COG1091	dTDP-4-dehydrorhamnose reductase activity
OCAR_4555	COG1132	(ABC) transporter
OCAR_4558	COG1215	transferase activity, transferring glycosyl groups
OCAR_4560	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OCAR_4561	COG1120	ATPase activity
OCAR_4564	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OCAR_4566	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OCAR_4568	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
OCAR_4569	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
OCAR_4570	COG4133	protoheme IX ABC transporter activity
OCAR_4571	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
OCAR_4575	COG0670	Belongs to the BI1 family
OCAR_4577	COG4181	ATPase activity
OCAR_4579	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
OCAR_4580	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
OCAR_4581	COG0039	L-malate dehydrogenase activity
OCAR_4583	COG0508	dehydrogenase complex catalyzes the overall conversion of
OCAR_4584	COG1028	Short-chain dehydrogenase reductase Sdr
OCAR_4585	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OCAR_4587	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
OCAR_4589	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
OCAR_4591	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
OCAR_4592	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
OCAR_4593	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
OCAR_4594	COG1764	response to oxidative stress
OCAR_4595	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
OCAR_4596	COG0355	proton-transporting ATP synthase activity, rotational mechanism
OCAR_4597	COG0494	nUDIX hydrolase
OCAR_4600	COG0793	Belongs to the peptidase S41A family
OCAR_4602	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
OCAR_4603	COG0799	negative regulation of ribosome biogenesis
OCAR_4604	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
OCAR_4605	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
OCAR_4606	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
OCAR_4607	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
OCAR_4608	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OCAR_4609	COG0211	Belongs to the bacterial ribosomal protein bL27 family
OCAR_4610	COG0261	This protein binds to 23S rRNA in the presence of protein L20
OCAR_4612	COG0477	Major facilitator Superfamily
OCAR_4613	COG1877	trehalose-phosphatase activity
OCAR_4614	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
OCAR_4619	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
OCAR_4624	COG4585	Histidine kinase
OCAR_4625	COG2197	response regulator
OCAR_4626	COG0405	Gamma-glutamyltransferase
OCAR_4627	COG0402	S-adenosylhomocysteine deaminase activity
OCAR_4631	COG4948	Mandelate Racemase Muconate Lactonizing
OCAR_4634	COG2514	catechol 2,3-dioxygenase activity
OCAR_4635	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OCAR_4636	COG1376	ErfK ybiS ycfS ynhG family protein
OCAR_4638	COG1294	oxidase, subunit
OCAR_4639	COG1271	oxidase subunit
OCAR_4645	COG5002	protein histidine kinase activity
OCAR_4646	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
OCAR_4647	COG0573	inorganic phosphate transmembrane transporter activity
OCAR_4648	COG0581	inorganic phosphate transmembrane transporter activity
OCAR_4649	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
OCAR_4650	COG0704	Plays a role in the regulation of phosphate uptake
OCAR_4651	COG0745	RESPONSE REGULATOR receiver
OCAR_4654	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
OCAR_4655	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
OCAR_4657	COG2967	ApaG domain
OCAR_4662	COG0717	Belongs to the dCTP deaminase family
OCAR_4665	COG1999	signal sequence binding
OCAR_4667	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OCAR_4668	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
OCAR_4673	COG0534	Mate efflux family protein
OCAR_4674	COG0167	dihydroorotate dehydrogenase activity
OCAR_4678	COG1846	Transcriptional regulator
OCAR_4682	COG0312	modulator of DNA gyrase
OCAR_4684	COG1565	acr, cog1565
OCAR_4684	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
OCAR_4686	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
OCAR_4687	COG0109	protoheme IX farnesyltransferase activity
OCAR_4689	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
OCAR_4692	COG3346	SURF1 family
OCAR_4694	COG0612	Peptidase, M16
OCAR_4697	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
OCAR_4698	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
OCAR_4700	COG0356	it plays a direct role in the translocation of protons across the membrane
OCAR_4703	COG0784	Response regulator, receiver
OCAR_4703	COG2205	protein histidine kinase activity
OCAR_4705	COG4566	intracellular signal transduction
OCAR_4706	COG0156	8-amino-7-oxononanoate synthase activity
OCAR_4707	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
OCAR_4709	COG0235	Class ii aldolase
OCAR_4716	COG0697	spore germination
OCAR_4717	COG1764	response to oxidative stress
OCAR_4719	COG1309	transcriptional regulator
OCAR_4721	COG4774	siderophore transport
OCAR_4728	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
OCAR_4730	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
OCAR_4731	COG5328	Belongs to the UPF0262 family
OCAR_4732	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
OCAR_4733	COG0424	maF-like protein
OCAR_4734	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
OCAR_4736	COG5001	Diguanylate cyclase
OCAR_4738	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OCAR_4745	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OCAR_4748	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
OCAR_4752	COG2096	Adenosyltransferase
OCAR_4753	COG2086	electron transfer activity
OCAR_4754	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
OCAR_4755	COG1250	3-hydroxyacyl-CoA dehydrogenase
OCAR_4757	COG2764	glyoxalase bleomycin resistance protein dioxygenase
OCAR_4758	COG5507	3-demethylubiquinone-9 3-methyltransferase
OCAR_4759	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OCAR_4760	COG0165	Argininosuccinate lyase
OCAR_4762	COG0019	diaminopimelate decarboxylase activity
OCAR_4766	COG2884	Cell division ATP-binding protein ftsE
OCAR_4772	COG0287	Prephenate dehydrogenase
OCAR_4773	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OCAR_4776	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OCAR_4777	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OCAR_4777	COG2813	Specifically methylates the guanine in position
OCAR_4780	COG0542	response to heat
OCAR_4781	COG0739	heme binding
OCAR_4819	COG1475	DNA binding
OCAR_4849	COG1309	transcriptional regulator
OCAR_4851	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OCAR_4853	COG0577	efflux transmembrane transporter activity
OCAR_4853	COG1136	(ABC) transporter
OCAR_4857	COG0842	Transport permease protein
OCAR_4858	COG0842	Transport permease protein
OCAR_4859	COG1131	(ABC) transporter
OCAR_4861	COG1309	transcriptional regulator
OCAR_4863	COG1028	Short-chain dehydrogenase reductase Sdr
OCAR_4865	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
OCAR_4866	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
OCAR_4876	COG3038	cytochrome b561
OCAR_4880	COG1477	protein flavinylation
OCAR_4883	COG2217	Heavy metal translocating P-type atpase
OCAR_4884	COG2217	Heavy metal translocating P-type atpase
OCAR_4886	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
OCAR_4887	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OCAR_4888	COG4558	Periplasmic binding protein
OCAR_4902	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
OCAR_4903	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
OCAR_4908	COG0523	cobalamin synthesis protein
OCAR_4915	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
OCAR_4923	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
OCAR_4924	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
OCAR_4925	COG0330	HflC and HflK could
OCAR_4931	COG4251	negative regulation of phosphorylation
OCAR_4931	COG2203	Gaf domain
OCAR_4931	COG3706	GGDEF domain
OCAR_4931	COG5001	Diguanylate cyclase
OCAR_4934	COG1210	Utp--glucose-1-phosphate uridylyltransferase
OCAR_4935	COG2951	lytic endotransglycosylase activity
OCAR_4939	COG0070	glutamate synthase
OCAR_4939	COG0069	glutamate synthase activity
OCAR_4939	COG0067	glutamate synthase
OCAR_4942	COG1595	DNA-templated transcription, initiation
OCAR_4943	COG0071	Belongs to the small heat shock protein (HSP20) family
OCAR_4946	COG0583	DNA-binding transcription factor activity
OCAR_4947	COG0483	inositol monophosphate 1-phosphatase activity
OCAR_4975	COG2801	Transposase and inactivated derivatives
OCAR_4979	COG3415	Transposase
OCAR_4979	COG2801	Transposase and inactivated derivatives
OCAR_4984	COG4397	Mu-like prophage major head subunit gpT
OCAR_4993	COG1012	belongs to the aldehyde dehydrogenase family
OCAR_4994	COG1414	Transcriptional regulator
OCAR_4995	COG1024	Enoyl-CoA hydratase
OCAR_5000	COG1804	L-carnitine dehydratase bile acid-inducible protein F
OCAR_5002	COG0431	NADPH-dependent FMN reductase
OCAR_5002	COG1053	succinate dehydrogenase
OCAR_5002	COG3976	FMN-binding domain protein
OCAR_5004	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
OCAR_5004	COG0778	Nitroreductase
OCAR_5005	COG0391	Required for morphogenesis under gluconeogenic growth conditions
OCAR_5006	COG1920	GTP binding
OCAR_5007	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
OCAR_5025	COG1477	protein flavinylation
OCAR_5030	COG4263	nitrous-oxide reductase activity
OCAR_5037	COG0826	peptidase U32
OCAR_5040	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OCAR_5042	COG2223	nitrite transmembrane transporter activity
OCAR_5043	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
OCAR_5044	COG1140	nitrate reductase beta subunit
OCAR_5045	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
OCAR_5046	COG2181	nitrate reductase activity
OCAR_5047	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OCAR_5049	COG0521	Mo-molybdopterin cofactor biosynthetic process
OCAR_5051	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
OCAR_5052	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OCAR_5053	COG1120	ATPase activity
OCAR_5054	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OCAR_5056	COG3023	N-Acetylmuramoyl-L-alanine amidase
OCAR_5060	COG1278	Cold shock
OCAR_5061	COG3768	UPF0283 membrane protein
OCAR_5062	COG3106	COG3106 Predicted ATPase
OCAR_5063	COG1272	protein, Hemolysin III
OCAR_5064	COG3387	PFAM Glycoside hydrolase 15-related
OCAR_5065	COG0561	phosphatase activity
OCAR_5066	COG3265	gluconokinase activity
OCAR_5067	COG0363	glucosamine-6-phosphate deaminase activity
OCAR_5068	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
OCAR_5069	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
OCAR_5070	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
OCAR_5077	COG0655	NAD(P)H dehydrogenase (quinone) activity
OCAR_5078	COG1741	Belongs to the pirin family
OCAR_5079	COG0583	DNA-binding transcription factor activity
OCAR_5080	COG0257	Belongs to the bacterial ribosomal protein bL36 family
OCAR_5083	COG0469	pyruvate kinase activity
OCAR_5086	COG3750	Belongs to the UPF0335 family
OCAR_5088	COG2989	Protein conserved in bacteria
OCAR_5089	COG2204	response regulator
OCAR_5090	COG1164	Oligoendopeptidase f
OCAR_5100	COG1012	belongs to the aldehyde dehydrogenase family
OCAR_5101	COG0828	Belongs to the bacterial ribosomal protein bS21 family
OCAR_5102	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
OCAR_5103	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
OCAR_5110	COG5001	Diguanylate cyclase
OCAR_5110	COG3300	MHYT domain
OCAR_5111	COG3842	ATPase activity
OCAR_5112	COG1176	ABC-type spermidine putrescine transport system, permease component I
OCAR_5113	COG1177	transmembrane transport
OCAR_5119	COG1840	ABC-type Fe3 transport system, periplasmic component
OCAR_5120	COG2205	protein histidine kinase activity
OCAR_5124	COG0583	DNA-binding transcription factor activity
OCAR_5125	COG0492	ferredoxin-NADP+ reductase activity
OCAR_5126	COG1522	sequence-specific DNA binding
OCAR_5128	COG2259	Doxx family
OCAR_5130	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
OCAR_5131	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
OCAR_5135	COG0505	Belongs to the CarA family
OCAR_5138	COG0640	Transcriptional regulator
OCAR_5140	COG0358	DNA primase activity
OCAR_5141	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OCAR_5144	COG2951	lytic endotransglycosylase activity
OCAR_5147	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OCAR_5148	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OCAR_5150	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
OCAR_5153	COG1959	2 iron, 2 sulfur cluster binding
OCAR_5156	COG1305	Transglutaminase-like
OCAR_5157	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OCAR_5158	COG0243	molybdopterin cofactor binding
OCAR_5158	COG3383	formate dehydrogenase (NAD+) activity
OCAR_5159	COG0243	molybdopterin cofactor binding
OCAR_5159	COG3383	formate dehydrogenase (NAD+) activity
OCAR_5160	COG0437	4 iron, 4 sulfur cluster binding
OCAR_5161	COG2864	formate dehydrogenase
OCAR_5163	COG1921	L-seryl-tRNASec selenium transferase activity
OCAR_5165	COG3276	selenocysteine insertion sequence binding
OCAR_5170	COG1201	RNA secondary structure unwinding
OCAR_5172	COG1793	dna ligase
OCAR_5173	COG1573	uracil-dna glycosylase
OCAR_5176	COG0587	DNA-directed DNA polymerase activity
OCAR_5179	COG0640	Transcriptional regulator
OCAR_5180	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
OCAR_5181	COG3258	Cytochrome c
OCAR_5187	COG0737	Belongs to the 5'-nucleotidase family
OCAR_5191	COG2391	methyltransferase activity
OCAR_5192	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
OCAR_5194	COG1320	monovalent cation:proton antiporter activity
OCAR_5195	COG2212	antiporter activity
OCAR_5197	COG0651	ATP synthesis coupled electron transport
OCAR_5198	COG1006	Multisubunit Na H antiporter MnhC subunit
OCAR_5199	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OCAR_5199	COG2111	Na H antiporter
OCAR_5204	COG1611	Belongs to the LOG family
OCAR_5207	COG0482	sulfurtransferase activity
OCAR_5212	COG1766	The M ring may be actively involved in energy transduction
OCAR_5213	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OCAR_5215	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OCAR_5216	COG2204	response regulator
OCAR_5217	COG0512	Glutamine amidotransferase of anthranilate synthase
OCAR_5217	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
OCAR_5219	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OCAR_5220	COG3237	CsbD-like
OCAR_5223	COG1250	3-hydroxyacyl-CoA dehydrogenase
OCAR_5223	COG1024	Enoyl-CoA hydratase
OCAR_5229	COG1309	transcriptional regulator
OCAR_5234	COG0275	rRNA processing
OCAR_5237	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OCAR_5239	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
OCAR_5241	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
OCAR_5243	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
OCAR_5244	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
OCAR_5245	COG0812	UDP-N-acetylmuramate dehydrogenase activity
OCAR_5247	COG1181	Belongs to the D-alanine--D-alanine ligase family
OCAR_5248	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
OCAR_5249	COG0849	cell division
OCAR_5250	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
OCAR_5252	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OCAR_5254	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
OCAR_5256	COG0006	proline dipeptidase activity
OCAR_5257	COG2264	protein methyltransferase activity
OCAR_5263	COG0842	Transport permease protein
OCAR_5264	COG1131	(ABC) transporter
OCAR_5265	COG0210	DNA helicase
OCAR_5266	COG5487	UPF0391 membrane protein
OCAR_5269	COG0277	FAD linked oxidase domain protein
OCAR_5274	COG0114	fumarate hydratase activity
OCAR_5276	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
OCAR_5278	COG0330	HflC and HflK could
OCAR_5279	COG0330	HflC and HflK could
OCAR_5282	COG3830	Belongs to the UPF0237 family
OCAR_5282	COG0560	Phosphoserine phosphatase
OCAR_5283	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
OCAR_5287	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
OCAR_5288	COG3383	formate dehydrogenase (NAD+) activity
OCAR_5289	COG3383	formate dehydrogenase (NAD+) activity
OCAR_5290	COG0028	Belongs to the TPP enzyme family
OCAR_5291	COG0440	acetolactate synthase activity
OCAR_5292	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
OCAR_5293	COG1881	PFAM PEBP family protein
OCAR_5294	COG2326	polyphosphate kinase activity
OCAR_5296	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
OCAR_5301	COG2186	Transcriptional regulator
OCAR_5302	COG0277	FAD linked oxidase domain protein
OCAR_5306	COG0318	PFAM AMP-dependent synthetase and ligase
OCAR_5313	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
OCAR_5319	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
OCAR_5321	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
OCAR_5322	COG1278	Cold shock
OCAR_5327	COG0179	Fumarylacetoacetate (FAA) hydrolase
OCAR_5328	COG1132	(ABC) transporter
OCAR_5330	COG0859	PFAM glycosyl transferase family 9
OCAR_5331	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
OCAR_5332	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
OCAR_5335	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
OCAR_5335	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
OCAR_5339	COG0673	inositol 2-dehydrogenase activity
OCAR_5341	COG0728	peptidoglycan biosynthetic process
OCAR_5346	COG0438	transferase activity, transferring glycosyl groups
OCAR_5350	COG4948	Mandelate Racemase Muconate Lactonizing
OCAR_5351	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
OCAR_5352	COG1127	ABC transporter
OCAR_5353	COG3218	ABC-type transport auxiliary lipoprotein component
OCAR_5353	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
OCAR_5354	COG0837	glucose binding
OCAR_5357	COG0633	Ferredoxin
OCAR_5358	COG0492	ferredoxin-NADP+ reductase activity
OCAR_5360	COG0392	lysyltransferase activity
OCAR_5362	COG3685	Protein conserved in bacteria
OCAR_5369	COG1749	Flagellar hook protein flgE
OCAR_5370	COG1256	bacterial-type flagellum assembly
OCAR_5372	COG5443	negative regulation of bacterial-type flagellum assembly
OCAR_5380	COG1706	bacterial-type flagellum-dependent cell motility
OCAR_5384	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
OCAR_5386	COG4786	Flagellar basal body rod
OCAR_5387	COG4786	Flagellar basal body rod
OCAR_5393	COG1338	Plays a role in the flagellum-specific transport system
OCAR_5396	COG1558	bacterial-type flagellum-dependent cell motility
OCAR_5397	COG1677	Flagellar hook-basal body complex protein FliE
OCAR_5398	COG1987	bacterial-type flagellum assembly
OCAR_5399	COG1684	flagellar biosynthetic protein fliR
OCAR_5400	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
OCAR_5410	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
OCAR_5410	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
OCAR_5416	COG2814	Major facilitator Superfamily
OCAR_5427	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
OCAR_5428	COG1742	UPF0060 membrane protein
OCAR_5431	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
OCAR_5432	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
OCAR_5432	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
OCAR_5433	COG0509	glycine decarboxylation via glycine cleavage system
OCAR_5434	COG0404	The glycine cleavage system catalyzes the degradation of glycine
OCAR_5435	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
OCAR_5438	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
OCAR_5438	COG4651	solute:proton antiporter activity
OCAR_5440	COG0538	isocitrate dehydrogenase activity
OCAR_5449	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
OCAR_5450	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
OCAR_5451	COG0047	phosphoribosylformylglycinamidine synthase activity
OCAR_5452	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
OCAR_5455	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
OCAR_5456	COG1262	PFAM Formylglycine-generating sulfatase enzyme
OCAR_5457	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
OCAR_5458	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
OCAR_5459	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
OCAR_5462	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
OCAR_5473	COG3191	aminopeptidase activity
OCAR_5474	COG0785	Cytochrome C biogenesis protein
OCAR_5483	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OCAR_5485	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
OCAR_5485	COG3608	succinylglutamate desuccinylase aspartoacylase
OCAR_5486	COG2068	MobA-Related Protein
OCAR_5492	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OCAR_5495	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
OCAR_5496	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
OCAR_5502	COG0459	protein refolding
OCAR_5503	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
OCAR_5505	COG1028	Short-chain dehydrogenase reductase Sdr
OCAR_5507	COG1546	Belongs to the CinA family
OCAR_5507	COG1058	Belongs to the CinA family
OCAR_5508	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
OCAR_5509	COG1064	alcohol dehydrogenase
OCAR_5523	COG0859	PFAM glycosyl transferase family 9
OCAR_5539	COG0629	single-stranded DNA binding
OCAR_5540	COG0328	RNA-DNA hybrid ribonuclease activity
OCAR_5558	COG0305	Participates in initiation and elongation during chromosome replication
OCAR_5609	COG0517	IMP dehydrogenase activity
OCAR_5610	COG1752	Esterase of the alpha-beta hydrolase superfamily
OCAR_5615	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OCAR_5616	COG1529	Aldehyde oxidase and xanthine dehydrogenase
OCAR_5617	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
OCAR_5618	COG2080	2 iron, 2 sulfur cluster binding
OCAR_5619	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
OCAR_5624	COG0302	gtp cyclohydrolase
OCAR_5625	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
OCAR_5629	COG2201	protein-glutamate methylesterase activity
OCAR_5630	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
OCAR_5632	COG4771	TonB-dependent receptor
OCAR_5634	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
OCAR_5640	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OCAR_5644	COG1414	Transcriptional regulator
OCAR_5649	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OCAR_5659	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
OCAR_5660	COG0081	regulation of translation
OCAR_5661	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
OCAR_5662	COG0222	ribosome binding
OCAR_5663	COG0085	RNA polymerase activity
OCAR_5665	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
OCAR_5666	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
OCAR_5667	COG1132	(ABC) transporter
OCAR_5672	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
OCAR_5673	COG0049	tRNA binding
OCAR_5674	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
OCAR_5675	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
OCAR_5676	COG0051	transcription antitermination factor activity, RNA binding
OCAR_5677	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
OCAR_5678	COG0088	Forms part of the polypeptide exit tunnel
OCAR_5679	COG0089	rRNA binding
OCAR_5680	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
OCAR_5681	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
OCAR_5682	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
OCAR_5683	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
OCAR_5684	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
OCAR_5686	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
OCAR_5687	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
OCAR_5688	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
OCAR_5689	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
OCAR_5690	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
OCAR_5691	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
OCAR_5692	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
OCAR_5693	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
OCAR_5694	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
OCAR_5695	COG1841	ribosomal large subunit assembly
OCAR_5696	COG0200	Binds to the 23S rRNA
OCAR_5698	COG0563	adenylate kinase activity
OCAR_5699	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
OCAR_5700	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
OCAR_5701	COG0202	RNA polymerase activity
OCAR_5702	COG0203	ribosomal protein L17
OCAR_5704	COG1028	Short-chain dehydrogenase reductase Sdr
OCAR_5707	COG1733	regulation of RNA biosynthetic process
OCAR_5709	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
OCAR_5710	COG0564	pseudouridine synthase activity
OCAR_5714	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
OCAR_5719	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OCAR_5722	COG0702	epimerase
OCAR_5723	COG1073	alpha beta
OCAR_5724	COG1073	alpha beta
OCAR_5725	COG0583	DNA-binding transcription factor activity
OCAR_5730	COG1846	Transcriptional regulator
OCAR_5731	COG1764	response to oxidative stress
OCAR_5732	COG0596	Alpha beta hydrolase
OCAR_5733	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
OCAR_5734	COG0697	spore germination
OCAR_5735	COG0415	Belongs to the DNA photolyase family
OCAR_5736	COG0450	alkyl hydroperoxide reductase
OCAR_5738	COG1254	Belongs to the acylphosphatase family
OCAR_5741	COG0321	lipoyl(octanoyl) transferase activity
OCAR_5744	COG2258	MOSC domain
OCAR_5746	COG0405	Gamma-glutamyltransferase
OCAR_5749	COG0726	polysaccharide deacetylase
OCAR_5759	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
OCAR_5762	COG1686	Belongs to the peptidase S11 family
OCAR_5765	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
OCAR_5774	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
OCAR_5776	COG0784	Response regulator, receiver
OCAR_5778	COG0267	Belongs to the bacterial ribosomal protein bL33 family
OCAR_5782	COG0557	exoribonuclease II activity
OCAR_5783	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
OCAR_5785	COG0758	DNA mediated transformation
OCAR_5786	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OCAR_5787	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
OCAR_5788	COG0540	Belongs to the ATCase OTCase family
OCAR_5791	COG1960	acyl-CoA dehydrogenase activity
OCAR_5793	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
OCAR_5794	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
OCAR_5796	COG0154	amidase activity
OCAR_5800	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
OCAR_5805	COG0583	DNA-binding transcription factor activity
OCAR_5807	COG1335	isochorismatase
OCAR_5818	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OCAR_5821	COG2963	transposase activity
OCAR_5829	COG0741	lytic transglycosylase activity
OCAR_5830	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OCAR_5831	COG1970	mechanosensitive ion channel activity
OCAR_5832	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
OCAR_5837	COG1758	RNA polymerase activity
OCAR_5839	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
OCAR_5840	COG0736	holo-[acyl-carrier-protein] synthase activity
OCAR_5841	COG0681	Belongs to the peptidase S26 family
OCAR_5842	COG0571	ribonuclease III activity
OCAR_5843	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
OCAR_5846	COG1381	Involved in DNA repair and RecF pathway recombination
OCAR_5848	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
OCAR_5850	COG1914	H( )-stimulated, divalent metal cation uptake system
OCAR_5853	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
OCAR_5855	COG0113	porphobilinogen synthase activity
OCAR_5860	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
OCAR_5861	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
OCAR_5862	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OCAR_5862	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OCAR_5864	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
OCAR_5865	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
OCAR_5866	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
OCAR_5867	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
OCAR_5875	COG0416	fatty acid biosynthetic process
OCAR_5876	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OCAR_5877	COG0776	regulation of translation
OCAR_5879	COG2755	lipolytic protein G-D-S-L family
OCAR_5879	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
OCAR_5882	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
OCAR_5890	COG1612	heme a metabolic process
OCAR_5891	COG0672	)-iron permease
OCAR_5895	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
OCAR_5896	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
OCAR_5901	COG0174	glutamine synthetase
OCAR_5902	COG0347	Belongs to the P(II) protein family
OCAR_5904	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
OCAR_5904	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
OCAR_5907	COG0544	peptidyl-prolyl cis-trans isomerase activity
OCAR_5908	COG0740	serine-type endopeptidase activity
OCAR_5909	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
OCAR_5911	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
OCAR_5914	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OCAR_5917	COG2195	Cleaves the N-terminal amino acid of tripeptides
OCAR_5919	COG0776	regulation of translation
OCAR_5921	COG0473	3-isopropylmalate dehydrogenase activity
OCAR_5923	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OCAR_5924	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OCAR_5926	COG0649	NAD binding
OCAR_5927	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
OCAR_5928	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
OCAR_5930	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
OCAR_5931	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OCAR_5933	COG0713	ATP synthesis coupled electron transport
OCAR_5936	COG1007	ATP synthesis coupled electron transport
OCAR_5939	COG0346	lactoylglutathione lyase activity
OCAR_5943	COG4774	siderophore transport
OCAR_5943	COG4774	siderophore transport
OCAR_5945	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OCAR_5947	COG0442	prolyl-tRNA aminoacylation
OCAR_5949	COG1136	(ABC) transporter
OCAR_5955	COG0052	Belongs to the universal ribosomal protein uS2 family
OCAR_5956	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
OCAR_5957	COG0528	UMP kinase activity
OCAR_5958	COG0233	cytoplasmic translational termination
OCAR_5959	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
OCAR_5961	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
OCAR_5962	COG0750	zinc metalloprotease
OCAR_5963	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OCAR_5966	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
OCAR_5967	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
OCAR_5968	COG3494	Protein of unknown function (DUF1009)
OCAR_5969	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
OCAR_5971	COG0372	Belongs to the citrate synthase family
OCAR_5972	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
OCAR_5973	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
OCAR_5974	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
OCAR_5975	COG0658	competence protein
OCAR_5975	COG2333	competence protein COMEC
OCAR_5976	COG0745	RESPONSE REGULATOR receiver
OCAR_5977	COG0784	Response regulator, receiver
OCAR_5978	COG2205	protein histidine kinase activity
OCAR_5980	COG0511	ligase activity, forming carbon-carbon bonds
OCAR_5981	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
OCAR_5984	COG0436	Aminotransferase
OCAR_5985	COG1530	ribonuclease E activity
OCAR_5985	COG1530	ribonuclease E activity
OCAR_5986	COG0860	N-Acetylmuramoyl-L-alanine amidase
OCAR_5987	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
OCAR_5989	COG0590	tRNA wobble adenosine to inosine editing
OCAR_5991	COG0739	heme binding
OCAR_5992	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
OCAR_5995	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
OCAR_5996	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
OCAR_5997	COG2945	thiolester hydrolase activity
OCAR_5998	COG1104	cysteine desulfurase activity
OCAR_5999	COG0719	Fe-S assembly protein
OCAR_6000	COG0396	ATPase activity
OCAR_6001	COG0719	Fe-S assembly protein
OCAR_6002	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OCAR_6003	COG2151	metal-sulfur cluster biosynthetic enzyme
OCAR_6004	COG0316	Belongs to the HesB IscA family
OCAR_6005	COG3706	GGDEF domain
OCAR_6006	COG0513	Belongs to the DEAD box helicase family
OCAR_6007	COG0187	DNA topoisomerase II activity
OCAR_6009	COG0586	Pfam SNARE associated Golgi protein
OCAR_6010	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
OCAR_6012	COG3243	poly(R)-hydroxyalkanoic acid synthase
OCAR_6015	COG0436	Aminotransferase
OCAR_6017	COG1494	fructose-1,6-bisphosphatase
OCAR_6018	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OCAR_6019	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
OCAR_6021	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
OCAR_6022	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
OCAR_6024	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
OCAR_6025	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
OCAR_6033	COG1278	Cold shock
OCAR_6051	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
OCAR_6052	COG0671	phosphoesterase, PA-phosphatase related
OCAR_6053	COG0463	Glycosyl transferase, family 2
OCAR_6055	COG0626	cystathionine gamma-synthase activity
OCAR_6056	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OCAR_6057	COG4597	amino acid ABC transporter
OCAR_6058	COG0765	amino acid transport
OCAR_6059	COG1126	abc transporter atp-binding protein
OCAR_6062	COG1538	Outer membrane efflux protein
OCAR_6067	COG1024	Enoyl-CoA hydratase
OCAR_6068	COG1804	L-carnitine dehydratase bile acid-inducible protein F
OCAR_6069	COG1960	acyl-CoA dehydrogenase activity
OCAR_6070	COG1804	L-carnitine dehydratase bile acid-inducible protein F
OCAR_6073	COG1804	L-carnitine dehydratase bile acid-inducible protein F
OCAR_6075	COG0129	dihydroxy-acid dehydratase activity
OCAR_6078	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OCAR_6079	COG4172	Belongs to the ABC transporter superfamily
OCAR_6086	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
OCAR_6089	COG0525	valine-tRNA ligase activity
OCAR_6090	COG2094	Belongs to the DNA glycosylase MPG family
OCAR_6091	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
OCAR_6093	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
OCAR_6093	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
OCAR_6097	COG5000	phosphorelay sensor kinase activity
OCAR_6098	COG2204	response regulator
OCAR_6099	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OCAR_6100	COG1923	regulation of RNA biosynthetic process
OCAR_6101	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
OCAR_6102	COG3956	TIGRFAM MazG family protein
OCAR_6103	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
OCAR_6104	COG2226	methyltransferase
OCAR_6106	COG0438	transferase activity, transferring glycosyl groups
OCAR_6114	COG0489	protein tyrosine kinase activity
OCAR_6114	COG3206	protein involved in exopolysaccharide biosynthesis
OCAR_6122	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
OCAR_6123	COG0321	lipoyl(octanoyl) transferase activity
OCAR_6123	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
OCAR_6124	COG0084	hydrolase, TatD family'
OCAR_6126	COG0470	DNA polymerase III
OCAR_6127	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
OCAR_6128	COG1686	Belongs to the peptidase S11 family
OCAR_6174	COG0582	viral genome integration into host DNA
OCAR_6176	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
OCAR_6181	COG2132	Multicopper oxidase
OCAR_6182	COG3842	ATPase activity
OCAR_6183	COG1177	transmembrane transport
OCAR_6186	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OCAR_6187	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
OCAR_6194	COG0473	3-isopropylmalate dehydrogenase activity
OCAR_6194	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
OCAR_6195	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
OCAR_6196	COG1984	allophanate hydrolase subunit 2
OCAR_6197	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
OCAR_6198	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OCAR_6200	COG1253	flavin adenine dinucleotide binding
OCAR_6201	COG1183	phosphatidylcholine synthase activity
OCAR_6202	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
OCAR_6203	COG3785	DNA binding
OCAR_6204	COG4774	siderophore transport
OCAR_6210	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
OCAR_6216	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
OCAR_6217	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
OCAR_6224	COG0840	transmembrane signaling receptor activity
OCAR_6226	COG0343	queuine tRNA-ribosyltransferase activity
OCAR_6228	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
OCAR_6231	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
OCAR_6233	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
OCAR_6234	COG2095	MarC family integral membrane protein
OCAR_6235	COG0629	single-stranded DNA binding
OCAR_6238	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OCAR_6248	COG0693	protein deglycase activity
OCAR_6250	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
OCAR_6254	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OCAR_6255	COG1862	Preprotein translocase
OCAR_6261	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
OCAR_6263	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
OCAR_6264	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
OCAR_6265	COG0805	protein transport
OCAR_6266	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
OCAR_6267	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
OCAR_6269	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
OCAR_6270	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
OCAR_6271	COG1472	Belongs to the glycosyl hydrolase 3 family
OCAR_6273	COG0018	arginyl-trna synthetase
OCAR_6274	COG0232	Belongs to the dGTPase family. Type 2 subfamily
OCAR_6275	COG0316	Belongs to the HesB IscA family
OCAR_6276	COG0708	Exodeoxyribonuclease III
OCAR_6278	COG0129	dihydroxy-acid dehydratase activity
OCAR_6281	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OCAR_6284	COG0508	dehydrogenase complex catalyzes the overall conversion of
OCAR_6285	COG0022	dehydrogenase e1 component
OCAR_6285	COG0508	dehydrogenase complex catalyzes the overall conversion of
OCAR_6286	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OCAR_6291	COG0431	NADPH-dependent FMN reductase
OCAR_6292	COG0148	phosphopyruvate hydratase activity
OCAR_6293	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
OCAR_6296	COG2877	3-deoxy-8-phosphooctulonate synthase activity
OCAR_6300	COG0504	CTP synthase activity
OCAR_6302	COG0149	triose-phosphate isomerase activity
OCAR_6304	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
OCAR_6305	COG0134	indole-3-glycerol-phosphate synthase activity
OCAR_6306	COG0315	cyclic pyranopterin monophosphate synthase activity
OCAR_6307	COG0303	'Molybdopterin
OCAR_6310	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
OCAR_6327	COG3045	CreA protein
OCAR_6333	COG0280	phosphate acetyltransferase
OCAR_6333	COG0281	malic enzyme
OCAR_6334	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
OCAR_6337	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
OCAR_6338	COG0248	Ppx GppA phosphatase
OCAR_6339	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
OCAR_6343	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
OCAR_6344	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
OCAR_6345	COG0861	Integral membrane protein TerC family
OCAR_6346	COG0105	UTP biosynthetic process
OCAR_6349	COG0488	(ABC) transporter
OCAR_6352	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
OCAR_6355	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
OCAR_6358	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
OCAR_6362	COG0477	Major facilitator Superfamily
OCAR_6363	COG0194	GDP metabolic process
OCAR_6364	COG1561	YicC-like family, N-terminal region
OCAR_6365	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
OCAR_6366	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OCAR_6367	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OCAR_6370	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
OCAR_6371	COG0360	Binds together with S18 to 16S ribosomal RNA
OCAR_6372	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
OCAR_6374	COG0359	binds to the 23S rRNA
OCAR_6376	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
OCAR_6377	COG0305	Participates in initiation and elongation during chromosome replication
OCAR_6378	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
OCAR_6381	COG1286	toxin biosynthetic process
OCAR_6382	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
OCAR_6384	COG0300	oxidoreductase activity
OCAR_6388	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
OCAR_6390	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
OCAR_6398	COG1393	Belongs to the ArsC family
OCAR_6400	COG0038	chloride channel
OCAR_6419	COG0464	growth
OCAR_6422	COG2948	multi-organism process
OCAR_6427	COG3451	type IV secretory pathway VirB4
OCAR_6430	COG4962	Type ii secretion system protein e
OCAR_6442	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
OCAR_6447	COG5489	Protein of unknown function (DUF736)
OCAR_6458	COG5489	Protein of unknown function (DUF736)
OCAR_6467	COG0519	Catalyzes the synthesis of GMP from XMP
OCAR_6467	COG0518	GMP synthase (glutamine-hydrolyzing) activity
OCAR_6468	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
OCAR_6468	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
OCAR_6472	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
OCAR_6475	COG1671	Belongs to the UPF0178 family
OCAR_6476	COG0488	(ABC) transporter
OCAR_6477	COG0583	DNA-binding transcription factor activity
OCAR_6478	COG2814	Major facilitator Superfamily
OCAR_6479	COG2814	Major facilitator Superfamily
OCAR_6484	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OCAR_6485	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OCAR_6490	COG4774	siderophore transport
OCAR_6498	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OCAR_6499	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
OCAR_6500	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OCAR_6501	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OCAR_6502	COG0604	alcohol dehydrogenase
OCAR_6502	COG3321	synthase
OCAR_6503	COG1560	Kdo2-lipid A biosynthetic process
OCAR_6507	COG3158	transport of potassium into the cell
OCAR_6509	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
OCAR_6511	COG1183	phosphatidylcholine synthase activity
OCAR_6512	COG0688	phosphatidylethanolamine metabolic process
OCAR_6514	COG5265	(ABC) transporter
OCAR_6516	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
OCAR_6519	COG0215	cysteine-tRNA ligase activity
OCAR_6523	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
OCAR_6525	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OCAR_6529	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
OCAR_6530	COG0546	phosphoglycolate phosphatase activity
OCAR_6532	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
OCAR_6534	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
OCAR_6535	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
OCAR_6537	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
OCAR_6539	COG1392	Phosphate transport regulator
OCAR_6540	COG0306	phosphate transporter
OCAR_6541	COG1285	pathogenesis
OCAR_6542	COG2205	protein histidine kinase activity
OCAR_6545	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
OCAR_6547	COG2832	Protein of unknown function (DUF454)
OCAR_6550	COG1804	L-carnitine dehydratase bile acid-inducible protein F
OCAR_6554	COG0045	succinate-CoA ligase (ADP-forming) activity
OCAR_6555	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
OCAR_6556	COG1802	Transcriptional regulator
OCAR_6557	COG0179	Fumarylacetoacetate (FAA) hydrolase
OCAR_6559	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OCAR_6560	COG2084	Dehydrogenase
OCAR_6561	COG3622	Belongs to the hyi family
OCAR_6562	COG3960	tartronate-semialdehyde synthase activity
OCAR_6563	COG1414	Transcriptional regulator
OCAR_6565	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
OCAR_6566	COG0045	succinate-CoA ligase (ADP-forming) activity
OCAR_6569	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
OCAR_6570	COG2205	protein histidine kinase activity
OCAR_6571	COG0745	RESPONSE REGULATOR receiver
OCAR_6573	COG3088	subunit of a heme lyase
OCAR_6574	COG1138	Cytochrome C-type biogenesis protein
OCAR_6575	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
OCAR_6576	COG4235	cytochrome complex assembly
OCAR_6609	COG4695	Portal protein
OCAR_6615	COG0477	Major facilitator Superfamily
OCAR_6616	COG2983	Belongs to the UPF0260 family
OCAR_6617	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
OCAR_6622	COG0861	Integral membrane protein TerC family
OCAR_6630	COG2205	protein histidine kinase activity
OCAR_6632	COG2166	iron-sulfur cluster assembly
OCAR_6636	COG4957	zinc ion binding
OCAR_6640	COG0433	COG0433 Predicted ATPase
OCAR_6642	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
OCAR_6644	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
OCAR_6654	COG0427	acetyl-CoA hydrolase
OCAR_6660	COG1473	amidohydrolase
OCAR_6664	COG2409	Drug exporters of the RND superfamily
OCAR_6666	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
OCAR_6667	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
OCAR_6668	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
OCAR_6670	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
OCAR_6671	COG1657	PFAM Prenyltransferase squalene oxidase
OCAR_6672	COG1233	COG1233 Phytoene dehydrogenase and related
OCAR_6673	COG1562	ergosterol biosynthetic process
OCAR_6674	COG1562	ergosterol biosynthetic process
OCAR_6676	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
OCAR_6677	COG1054	Belongs to the UPF0176 family
OCAR_6678	COG2900	Belongs to the SlyX family
OCAR_6679	COG0656	L-ascorbic acid biosynthetic process
OCAR_6684	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OCAR_6686	COG1309	transcriptional regulator
OCAR_6690	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
OCAR_6692	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
OCAR_6694	COG0247	lactate metabolic process
OCAR_6694	COG0277	FAD linked oxidase domain protein
OCAR_6696	COG1804	L-carnitine dehydratase bile acid-inducible protein F
OCAR_6702	COG3383	formate dehydrogenase (NAD+) activity
OCAR_6703	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
OCAR_6713	COG0303	'Molybdopterin
OCAR_6714	COG1763	Mo-molybdopterin cofactor biosynthetic process
OCAR_6715	COG0746	molybdenum cofactor guanylyltransferase activity
OCAR_6719	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
OCAR_6721	COG0848	biopolymer transport protein
OCAR_6723	COG3128	pkhd-type hydroxylase
OCAR_6724	COG4774	siderophore transport
OCAR_6726	COG0156	8-amino-7-oxononanoate synthase activity
OCAR_6727	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
OCAR_6728	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OCAR_6731	COG0667	Aldo Keto reductase
OCAR_6732	COG5001	Diguanylate cyclase
OCAR_6732	COG3300	MHYT domain
OCAR_6736	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
OCAR_6738	COG1012	belongs to the aldehyde dehydrogenase family
OCAR_6742	COG3181	Tripartite tricarboxylate transporter family receptor
OCAR_6743	COG0583	DNA-binding transcription factor activity
OCAR_6744	COG0028	Belongs to the TPP enzyme family
OCAR_6745	COG1414	Transcriptional regulator
OCAR_6747	COG0477	Major facilitator Superfamily
OCAR_6749	COG1414	Transcriptional regulator
OCAR_6751	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
OCAR_6752	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
OCAR_6754	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
OCAR_6754	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
OCAR_6755	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
OCAR_6756	COG3706	GGDEF domain
OCAR_6765	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
OCAR_6767	COG0437	4 iron, 4 sulfur cluster binding
OCAR_6768	COG0243	molybdopterin cofactor binding
OCAR_6768	COG3383	formate dehydrogenase (NAD+) activity
OCAR_6769	COG0243	molybdopterin cofactor binding
OCAR_6769	COG3383	formate dehydrogenase (NAD+) activity
OCAR_6772	COG1176	ABC-type spermidine putrescine transport system, permease component I
OCAR_6773	COG3842	ATPase activity
OCAR_6774	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
OCAR_6775	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
OCAR_6778	COG0318	PFAM AMP-dependent synthetase and ligase
OCAR_6787	COG0625	glutathione transferase activity
OCAR_6795	COG4948	Mandelate Racemase Muconate Lactonizing
OCAR_6796	COG1414	Transcriptional regulator
OCAR_6797	COG0463	Glycosyl transferase, family 2
OCAR_6797	COG1216	Glycosyl transferase, family 2
OCAR_6799	COG0583	DNA-binding transcription factor activity
OCAR_6807	COG0318	PFAM AMP-dependent synthetase and ligase
OCAR_6809	COG0625	glutathione transferase activity
OCAR_6821	COG0045	succinate-CoA ligase (ADP-forming) activity
OCAR_6821	COG1042	CoA-binding domain protein
OCAR_6821	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OCAR_6822	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
OCAR_6825	COG0517	IMP dehydrogenase activity
OCAR_6827	COG0071	Belongs to the small heat shock protein (HSP20) family
OCAR_6830	COG1127	ABC transporter
OCAR_6831	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
OCAR_6831	COG3218	ABC-type transport auxiliary lipoprotein component
OCAR_6833	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
OCAR_6833	COG1648	precorrin-2 dehydrogenase activity
OCAR_6834	COG0243	molybdopterin cofactor binding
OCAR_6836	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OCAR_6838	COG2201	protein-glutamate methylesterase activity
OCAR_6843	COG1120	ATPase activity
OCAR_6844	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OCAR_6845	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OCAR_6848	COG3842	ATPase activity
OCAR_6867	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
OCAR_6871	COG3052	prosthetic group binding
OCAR_6875	COG3181	Tripartite tricarboxylate transporter family receptor
OCAR_6880	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OCAR_6881	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OCAR_6884	COG1309	transcriptional regulator
OCAR_6887	COG0519	Catalyzes the synthesis of GMP from XMP
OCAR_6888	COG5001	Diguanylate cyclase
OCAR_6891	COG1960	acyl-CoA dehydrogenase activity
OCAR_6892	COG1024	Enoyl-CoA hydratase
OCAR_6893	COG0123	including yeast histone deacetylase and acetoin utilization protein
OCAR_6894	COG1722	exodeoxyribonuclease VII activity
OCAR_6895	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
OCAR_6896	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
OCAR_6897	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
OCAR_6901	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
OCAR_6902	COG0406	alpha-ribazole phosphatase activity
OCAR_6903	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
OCAR_6908	COG0484	heat shock protein binding
OCAR_6910	COG0259	pyridoxamine-phosphate oxidase activity
OCAR_6911	COG1028	Short-chain dehydrogenase reductase Sdr
OCAR_6913	COG1324	tolerance protein
OCAR_6915	COG1376	ErfK ybiS ycfS ynhG family protein
OCAR_6920	COG1960	acyl-CoA dehydrogenase activity
OCAR_6921	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
OCAR_6921	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
OCAR_6924	COG0009	L-threonylcarbamoyladenylate synthase
OCAR_6925	COG0277	FAD linked oxidase domain protein
OCAR_6926	COG2135	peptidase activity
OCAR_6931	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
OCAR_6932	COG0354	folic acid binding
OCAR_6933	COG2818	Glycosylase
OCAR_6934	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
OCAR_6940	COG0604	alcohol dehydrogenase
OCAR_6942	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
OCAR_6943	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
OCAR_6946	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
OCAR_6946	COG0574	Belongs to the PEP-utilizing enzyme family
OCAR_6949	COG0751	glycine-tRNA ligase activity
OCAR_6952	COG0752	glycyl-tRNA synthetase alpha subunit
OCAR_6958	COG0142	geranyltranstransferase activity
OCAR_6959	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
OCAR_6965	COG1573	uracil-dna glycosylase
OCAR_6966	COG1028	Short-chain dehydrogenase reductase Sdr
OCAR_6967	COG2814	Major facilitator Superfamily
OCAR_6976	COG0521	Mo-molybdopterin cofactor biosynthetic process
OCAR_6978	COG2321	neutral zinc metallopeptidase
OCAR_6979	COG2189	Belongs to the N(4) N(6)-methyltransferase family
OCAR_6981	COG0625	glutathione transferase activity
OCAR_6982	COG1194	a g-specific adenine glycosylase
OCAR_6985	COG1196	nuclear chromosome segregation
OCAR_6988	COG1704	LemA family
OCAR_6992	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
OCAR_6995	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
OCAR_6995	COG2857	Cytochrome c1
OCAR_6996	COG0723	plastoquinol--plastocyanin reductase activity
OCAR_6997	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
OCAR_6998	COG0602	queuosine metabolic process
OCAR_7000	COG0408	coproporphyrinogen oxidase activity
OCAR_7004	COG0617	tRNA 3'-terminal CCA addition
OCAR_7006	COG0494	nUDIX hydrolase
OCAR_7008	COG0714	Associated with various cellular activities
OCAR_7014	COG4771	TonB-dependent receptor
OCAR_7016	COG0523	cobalamin synthesis protein
OCAR_7030	COG2022	thiamine diphosphate biosynthetic process
OCAR_7033	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
OCAR_7035	COG2204	response regulator
OCAR_7038	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OCAR_7047	COG4106	trans-aconitate 2-methyltransferase activity
OCAR_7049	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
OCAR_7050	COG1376	ErfK ybiS ycfS ynhG family protein
OCAR_7052	COG2897	thiosulfate sulfurtransferase activity
OCAR_7055	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OCAR_7059	COG0412	Dienelactone hydrolase
OCAR_7061	COG1640	4-alpha-glucanotransferase
OCAR_7063	COG0366	Alpha amylase catalytic
OCAR_7065	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
OCAR_7067	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
OCAR_7074	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
OCAR_7076	COG2079	MmgE PrpD family protein
OCAR_7078	COG0679	Auxin Efflux Carrier
OCAR_7079	COG2814	Major facilitator Superfamily
OCAR_7080	COG0438	transferase activity, transferring glycosyl groups
OCAR_7085	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OCAR_7089	COG0784	Response regulator, receiver
OCAR_7089	COG4191	Histidine kinase
OCAR_7091	COG2205	protein histidine kinase activity
OCAR_7095	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OCAR_7096	COG1116	anion transmembrane transporter activity
OCAR_7097	COG1028	Short-chain dehydrogenase reductase Sdr
OCAR_7098	COG1802	Transcriptional regulator
OCAR_7103	COG0840	transmembrane signaling receptor activity
OCAR_7105	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
OCAR_7108	COG1595	DNA-templated transcription, initiation
OCAR_7113	COG2201	protein-glutamate methylesterase activity
OCAR_7116	COG0784	Response regulator, receiver
OCAR_7116	COG2198	Histidine kinase
OCAR_7116	COG0643	Histidine kinase
OCAR_7123	COG1376	ErfK ybiS ycfS ynhG family protein
OCAR_7126	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
OCAR_7127	COG0181	hydroxymethylbilane synthase activity
OCAR_7131	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
OCAR_7132	COG4191	Histidine kinase
OCAR_7133	COG4566	intracellular signal transduction
OCAR_7136	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
OCAR_7138	COG3278	Belongs to the heme-copper respiratory oxidase family
OCAR_7141	COG2010	Cytochrome c
OCAR_7148	COG0564	pseudouridine synthase activity
OCAR_7149	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OCAR_7153	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
OCAR_7155	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
OCAR_7157	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OCAR_7163	COG2223	nitrite transmembrane transporter activity
OCAR_7164	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
OCAR_7167	COG1304	FMN binding
OCAR_7169	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
OCAR_7170	COG0659	secondary active sulfate transmembrane transporter activity
OCAR_7173	COG0436	Aminotransferase
OCAR_7181	COG0625	glutathione transferase activity
OCAR_7183	COG0556	nucleotide-excision repair
OCAR_7184	COG0488	(ABC) transporter
OCAR_7189	COG0193	aminoacyl-tRNA hydrolase activity
OCAR_7190	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
OCAR_7193	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
OCAR_7195	COG1496	oxidoreductase activity
OCAR_7197	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
OCAR_7201	COG2205	protein histidine kinase activity
OCAR_7202	COG0745	RESPONSE REGULATOR receiver
OCAR_7203	COG1846	Transcriptional regulator
OCAR_7205	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OCAR_7206	COG0534	Mate efflux family protein
OCAR_7208	COG0590	tRNA wobble adenosine to inosine editing
OCAR_7209	COG2890	protein-(glutamine-N5) methyltransferase activity
OCAR_7210	COG0314	molybdopterin synthase activity
OCAR_7212	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
OCAR_7213	COG0322	excinuclease ABC activity
OCAR_7214	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
OCAR_7215	COG1278	Cold shock
OCAR_7216	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
OCAR_7220	COG1942	4-Oxalocrotonate Tautomerase
OCAR_7222	COG2852	Protein conserved in bacteria
OCAR_7226	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OCAR_7231	COG0745	RESPONSE REGULATOR receiver
OCAR_7232	COG0196	riboflavin kinase activity
OCAR_7234	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
OCAR_7235	COG4771	TonB-dependent receptor
OCAR_7236	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
OCAR_7238	COG0612	Peptidase, M16
OCAR_7239	COG0612	Peptidase, M16
OCAR_7241	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
OCAR_7242	COG0742	ribosomal rna small subunit methyltransferase
OCAR_7243	COG1187	pseudouridine synthase activity
OCAR_7244	COG0590	tRNA wobble adenosine to inosine editing
OCAR_7246	COG0151	Belongs to the GarS family
OCAR_7248	COG1570	exodeoxyribonuclease VII activity
OCAR_7251	COG1663	tetraacyldisaccharide 4'-kinase activity
OCAR_7252	COG1519	Transferase
OCAR_7255	COG1218	3'(2'),5'-bisphosphate nucleotidase
OCAR_7256	COG0312	modulator of DNA gyrase
OCAR_7258	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
OCAR_7262	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
OCAR_7263	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
OCAR_7264	COG0463	Glycosyl transferase, family 2
OCAR_7266	COG3416	Protein conserved in bacteria
OCAR_7267	COG1388	LysM domain
OCAR_7267	COG1376	ErfK ybiS ycfS ynhG family protein
OCAR_7271	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
OCAR_7272	COG0459	protein refolding
OCAR_7276	COG1620	l-lactate permease
OCAR_7277	COG4178	(ABC) transporter
OCAR_7281	COG0247	lactate metabolic process
OCAR_7282	COG0277	FAD linked oxidase domain protein
OCAR_7283	COG0277	FAD linked oxidase domain protein
OCAR_7284	COG1309	transcriptional regulator
OCAR_7286	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OCAR_7287	COG0037	tRNA processing
OCAR_7289	COG2885	chlorophyll binding
OCAR_7290	COG0823	Involved in the tonB-independent uptake of proteins
OCAR_7292	COG0848	biopolymer transport protein
OCAR_7297	COG0824	Thioesterase
OCAR_7299	COG2255	four-way junction helicase activity
OCAR_7301	COG0632	four-way junction helicase activity
OCAR_7302	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
OCAR_7303	COG2239	Acts as a magnesium transporter
OCAR_7305	COG0217	transcriptional regulatory protein
OCAR_7306	COG1692	metallophosphoesterase
OCAR_7307	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
OCAR_7308	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
OCAR_7312	COG0126	phosphoglycerate kinase activity
OCAR_7313	COG3588	fructose-bisphosphate aldolase
OCAR_7316	COG0483	inositol monophosphate 1-phosphatase activity
OCAR_7320	COG1132	(ABC) transporter
OCAR_7321	COG0254	rRNA binding
OCAR_7324	COG0604	alcohol dehydrogenase
OCAR_7324	COG1028	Short-chain dehydrogenase reductase Sdr
OCAR_7324	COG3321	synthase
OCAR_7325	COG3300	MHYT domain
OCAR_7325	COG5001	Diguanylate cyclase
OCAR_7326	COG1678	Uncharacterized ACR, COG1678
OCAR_7329	COG0328	RNA-DNA hybrid ribonuclease activity
OCAR_7330	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
OCAR_7331	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
OCAR_7333	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
OCAR_7333	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
OCAR_7339	COG2358	TRAP transporter, solute receptor (TAXI family
OCAR_7353	COG1028	Short-chain dehydrogenase reductase Sdr
OCAR_7353	COG0604	alcohol dehydrogenase
OCAR_7353	COG3321	synthase
OCAR_7355	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
OCAR_7356	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OCAR_7357	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
OCAR_7358	COG0405	Gamma-glutamyltransferase
OCAR_7359	COG4336	lyase activity
OCAR_7360	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OCAR_7362	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OCAR_7363	COG1802	Transcriptional regulator
OCAR_7367	COG1529	Aldehyde oxidase and xanthine dehydrogenase
OCAR_7370	COG3706	GGDEF domain
OCAR_7372	COG1238	metal cluster binding
OCAR_7373	COG0140	phosphoribosyl-ATP diphosphatase activity
OCAR_7375	COG1132	(ABC) transporter
OCAR_7378	COG0318	PFAM AMP-dependent synthetase and ligase
OCAR_7381	COG1028	Short-chain dehydrogenase reductase Sdr
OCAR_7383	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
OCAR_7384	COG4208	sulfate ABC transporter
OCAR_7385	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
OCAR_7386	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
OCAR_7387	COG0175	sulfate reduction
OCAR_7388	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
OCAR_7388	COG1648	precorrin-2 dehydrogenase activity
OCAR_7390	COG0175	sulfate reduction
OCAR_7393	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
OCAR_7397	COG1376	ErfK ybiS ycfS ynhG family protein
OCAR_7399	COG0628	permease
OCAR_7405	COG0784	Response regulator, receiver
OCAR_7411	COG0513	Belongs to the DEAD box helicase family
OCAR_7412	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
OCAR_7413	COG1278	Cold shock
OCAR_7419	COG4964	Belongs to the GSP D family
OCAR_7426	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
OCAR_7427	COG0791	NLP P60 protein
OCAR_7428	COG4172	Belongs to the ABC transporter superfamily
OCAR_7429	COG4239	(ABC) transporter, permease
OCAR_7430	COG4174	ABC transporter (Permease)
OCAR_7431	COG4166	transmembrane transport
OCAR_7432	COG4166	transmembrane transport
OCAR_7434	COG3474	cytochrome
OCAR_7435	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
OCAR_7437	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OCAR_7438	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
OCAR_7441	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
OCAR_7442	COG0183	Belongs to the thiolase family
OCAR_7444	COG0582	viral genome integration into host DNA
OCAR_7461	COG1704	LemA family
OCAR_7462	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
OCAR_7469	COG0154	amidase activity
OCAR_7475	COG0583	DNA-binding transcription factor activity
OCAR_7482	COG1028	Short-chain dehydrogenase reductase Sdr
OCAR_7488	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
OCAR_7488	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
OCAR_7490	COG1132	(ABC) transporter
OCAR_7492	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
OCAR_7493	COG4585	Histidine kinase
OCAR_7500	COG1414	Transcriptional regulator
OCAR_7505	COG5001	Diguanylate cyclase
OCAR_7507	COG1529	Aldehyde oxidase and xanthine dehydrogenase
OCAR_7507	COG2010	Cytochrome c
OCAR_7508	COG2080	2 iron, 2 sulfur cluster binding
OCAR_7511	COG4608	Belongs to the ABC transporter superfamily
OCAR_7512	COG0444	Belongs to the ABC transporter superfamily
OCAR_7514	COG0601	transmembrane transport
OCAR_7518	COG0154	amidase activity
OCAR_7520	COG2217	Heavy metal translocating P-type atpase
OCAR_7521	COG0789	Transcriptional regulator
OCAR_7523	COG0747	negative chemotaxis
OCAR_7527	COG3852	Histidine kinase
OCAR_7528	COG0230	Belongs to the bacterial ribosomal protein bL34 family
OCAR_7529	COG0594	ribonuclease P activity
OCAR_7530	COG0706	membrane insertase activity
OCAR_7531	COG0218	Necessary for normal cell division and for the maintenance of normal septation
OCAR_7533	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
OCAR_7535	COG2171	N-acyltransferase activity
OCAR_7536	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OCAR_7538	COG0101	tRNA pseudouridine synthase activity
OCAR_7539	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
OCAR_7540	COG0242	peptide deformylase activity
OCAR_7542	COG2223	nitrite transmembrane transporter activity
OCAR_7543	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
OCAR_7544	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
OCAR_7545	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
OCAR_7547	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OCAR_7548	COG1522	sequence-specific DNA binding
OCAR_7551	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
OCAR_7552	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OCAR_7559	COG2188	Transcriptional regulator
OCAR_7560	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
OCAR_7564	COG1643	Atp-dependent helicase
OCAR_7565	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
OCAR_7567	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OCAR_7567	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OCAR_7569	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
OCAR_7573	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
OCAR_7575	COG0745	RESPONSE REGULATOR receiver
OCAR_7576	COG0642	Histidine kinase
OCAR_7578	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OCAR_7578	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
OCAR_7579	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
OCAR_7580	COG0481	GTPase activity
OCAR_7582	COG3422	double-strand break repair
OCAR_7586	COG0725	ABC transporter, periplasmic molybdate-binding protein
OCAR_7587	COG4149	molybdate abc transporter
OCAR_7588	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
OCAR_7590	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OCAR_7591	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
OCAR_7592	COG3263	regulation of cellular component size
OCAR_7593	COG3264	Mechanosensitive ion channel
OCAR_7593	COG1511	domain protein
OCAR_7594	COG0024	Methionine aminopeptidase
OCAR_7595	COG2003	Belongs to the UPF0758 family
OCAR_7601	COG3701	Conjugal transfer protein
OCAR_7602	COG3846	protein secretion by the type IV secretion system
OCAR_7605	COG3451	type IV secretory pathway VirB4
OCAR_7608	COG4962	Type ii secretion system protein e
OCAR_7611	COG0583	DNA-binding transcription factor activity
OCAR_7613	COG1595	DNA-templated transcription, initiation
OCAR_7627	COG1214	PFAM Peptidase M22, glycoprotease
OCAR_7627	COG0456	acetyltransferase
OCAR_7636	COG1937	Protein conserved in bacteria
OCAR_7639	COG2197	response regulator
OCAR_7642	COG1192	Involved in chromosome partitioning
OCAR_7643	COG1414	Transcriptional regulator
OCAR_7645	COG0629	single-stranded DNA binding
OCAR_7646	COG1414	Transcriptional regulator
OCAR_7647	COG1475	DNA binding
OCAR_7648	COG1192	Involved in chromosome partitioning
OCAR_7654	COG0464	growth
OCAR_7666	COG5489	Protein of unknown function (DUF736)
OCAR_7695	COG3451	type IV secretory pathway VirB4
OCAR_7700	COG3704	protein secretion by the type IV secretion system
OCAR_7702	COG3504	Conjugal transfer protein
OCAR_7704	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
OCAR_7706	COG0697	spore germination
OCAR_7719	COG4786	Flagellar basal body rod
OCAR_7720	COG0672	)-iron permease
OCAR_7748	COG0798	PFAM Bile acid sodium symporter
OCAR_7750	COG0431	NADPH-dependent FMN reductase
OCAR_7751	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OCAR_7756	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
OCAR_7762	COG2217	Heavy metal translocating P-type atpase
OCAR_7773	COG1595	DNA-templated transcription, initiation
OCAR_7777	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family