locus-tag class description LQZ07_00005 PF00308 Bacterial dnaA protein LQZ07_00005 PF08299 Bacterial dnaA protein helix-turn-helix LQZ07_00005 PF11638 DnaA N-terminal domain LQZ07_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LQZ07_00010 PF02767 DNA polymerase III beta subunit, central domain LQZ07_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LQZ07_00015 PF02463 RecF/RecN/SMC N terminal domain LQZ07_00020 PF01751 Toprim domain LQZ07_00020 PF18053 DNA gyrase B subunit insert domain LQZ07_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_00020 PF00204 DNA gyrase B LQZ07_00020 PF00986 DNA gyrase B subunit, carboxyl terminus LQZ07_00025 PF00011 Hsp20/alpha crystallin family LQZ07_00030 PF00155 Aminotransferase class I and II LQZ07_00035 PF00128 Alpha amylase, catalytic domain LQZ07_00045 PF05746 DALR anticodon binding domain LQZ07_00045 PF02092 Glycyl-tRNA synthetase beta subunit LQZ07_00050 PF02091 Glycyl-tRNA synthetase alpha subunit LQZ07_00055 PF01206 Sulfurtransferase TusA LQZ07_00060 PF03459 TOBE domain LQZ07_00060 PF17912 MalK OB fold domain LQZ07_00060 PF00005 ABC transporter LQZ07_00065 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_00070 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_00075 PF01547 Bacterial extracellular solute-binding protein LQZ07_00080 PF00672 HAMP domain LQZ07_00080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_00080 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_00085 PF00072 Response regulator receiver domain LQZ07_00085 PF00486 Transcriptional regulatory protein, C terminal LQZ07_00090 PF00108 Thiolase, N-terminal domain LQZ07_00090 PF02803 Thiolase, C-terminal domain LQZ07_00095 PF00378 Enoyl-CoA hydratase/isomerase LQZ07_00095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQZ07_00095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQZ07_00105 PF09186 Domain of unknown function (DUF1949) LQZ07_00105 PF01205 Uncharacterized protein family UPF0029 LQZ07_00110 PF02386 Cation transport protein LQZ07_00115 PF12724 Flavodoxin domain LQZ07_00150 PF13091 PLD-like domain LQZ07_00155 PF00171 Aldehyde dehydrogenase family LQZ07_00160 PF00202 Aminotransferase class-III LQZ07_00165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_00165 PF03466 LysR substrate binding domain LQZ07_00190 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LQZ07_00200 PF01541 GIY-YIG catalytic domain LQZ07_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_00215 PF03466 LysR substrate binding domain LQZ07_00230 PF05199 GMC oxidoreductase LQZ07_00230 PF00732 GMC oxidoreductase LQZ07_00235 PF01894 Uncharacterised protein family UPF0047 LQZ07_00255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQZ07_00255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LQZ07_00265 PF00440 Bacterial regulatory proteins, tetR family LQZ07_00265 PF08361 MAATS-type transcriptional repressor, C-terminal region LQZ07_00270 PF00356 Bacterial regulatory proteins, lacI family LQZ07_00275 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_00285 PF02774 Semialdehyde dehydrogenase, dimerisation domain LQZ07_00285 PF01118 Semialdehyde dehydrogenase, NAD binding domain LQZ07_00295 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_00295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_00305 PF00158 Sigma-54 interaction domain LQZ07_00305 PF00072 Response regulator receiver domain LQZ07_00310 PF00375 Sodium:dicarboxylate symporter family LQZ07_00330 PF01132 Elongation factor P (EF-P) OB domain LQZ07_00330 PF08207 Elongation factor P (EF-P) KOW-like domain LQZ07_00330 PF09285 Elongation factor P, C-terminal LQZ07_00345 PF16177 Acetyl-coenzyme A synthetase N-terminus LQZ07_00345 PF00501 AMP-binding enzyme LQZ07_00345 PF13193 AMP-binding enzyme C-terminal domain LQZ07_00350 PF04303 PrpF protein LQZ07_00355 PF00330 Aconitase family (aconitate hydratase) LQZ07_00355 PF00694 Aconitase C-terminal domain LQZ07_00360 PF00285 Citrate synthase, C-terminal domain LQZ07_00370 PF07729 FCD domain LQZ07_00370 PF00392 Bacterial regulatory proteins, gntR family LQZ07_00390 PF01209 ubiE/COQ5 methyltransferase family LQZ07_00400 PF03109 ABC1 family LQZ07_00405 PF02416 mttA/Hcf106 family LQZ07_00410 PF02416 mttA/Hcf106 family LQZ07_00415 PF00902 Sec-independent protein translocase protein (TatC) LQZ07_00420 PF01026 TatD related DNase LQZ07_00430 PF00672 HAMP domain LQZ07_00430 PF02743 Cache domain LQZ07_00430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_00435 PF00245 Alkaline phosphatase LQZ07_00465 PF02566 OsmC-like protein LQZ07_00470 PF01047 MarR family LQZ07_00480 PF01053 Cys/Met metabolism PLP-dependent enzyme LQZ07_00495 PF00150 Cellulase (glycosyl hydrolase family 5) LQZ07_00510 PF00486 Transcriptional regulatory protein, C terminal LQZ07_00510 PF00072 Response regulator receiver domain LQZ07_00515 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_00515 PF00672 HAMP domain LQZ07_00530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_00545 PF05656 Protein of unknown function (DUF805) LQZ07_00550 PF01863 Protein of unknown function DUF45 LQZ07_00560 PF13520 Amino acid permease LQZ07_00570 PF18267 Rubredoxin NAD+ reductase C-terminal domain LQZ07_00570 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQZ07_00570 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LQZ07_00570 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LQZ07_00570 PF04324 BFD-like [2Fe-2S] binding domain LQZ07_00575 PF13806 Rieske-like [2Fe-2S] domain LQZ07_00580 PF01226 Formate/nitrite transporter LQZ07_00585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LQZ07_00585 PF14824 Sirohaem biosynthesis protein central LQZ07_00585 PF10414 Sirohaem synthase dimerisation region LQZ07_00590 PF01037 Lrp/AsnC ligand binding domain LQZ07_00590 PF13404 AsnC-type helix-turn-helix domain LQZ07_00605 PF02152 Dihydroneopterin aldolase LQZ07_00615 PF01227 GTP cyclohydrolase I LQZ07_00620 PF00271 Helicase conserved C-terminal domain LQZ07_00620 PF00270 DEAD/DEAH box helicase LQZ07_00640 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LQZ07_00645 PF00672 HAMP domain LQZ07_00645 PF02743 Cache domain LQZ07_00645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_00660 PF01047 MarR family LQZ07_00670 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_00675 PF00571 CBS domain LQZ07_00675 PF00005 ABC transporter LQZ07_00680 PF00583 Acetyltransferase (GNAT) family LQZ07_00700 PF01177 Asp/Glu/Hydantoin racemase LQZ07_00705 PF00313 'Cold-shock' DNA-binding domain LQZ07_00710 PF02567 Phenazine biosynthesis-like protein LQZ07_00720 PF00892 EamA-like transporter family LQZ07_00740 PF03880 DbpA RNA binding domain LQZ07_00740 PF00270 DEAD/DEAH box helicase LQZ07_00740 PF00271 Helicase conserved C-terminal domain LQZ07_00750 PF11606 Family 31 carbohydrate binding protein LQZ07_00760 PF03793 PASTA domain LQZ07_00760 PF00069 Protein kinase domain LQZ07_00775 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LQZ07_00780 PF00691 OmpA family LQZ07_00780 PF13677 Membrane MotB of proton-channel complex MotA/MotB LQZ07_00785 PF06761 Intracellular multiplication and human macrophage-killing LQZ07_00785 PF14331 ImcF-related N-terminal domain LQZ07_00785 PF06744 Type VI secretion protein IcmF C-terminal LQZ07_00805 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 LQZ07_00810 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LQZ07_00815 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LQZ07_00830 PF05947 Type VI secretion system, TssF LQZ07_00840 PF17871 AAA lid domain LQZ07_00840 PF00004 ATPase family associated with various cellular activities (AAA) LQZ07_00840 PF10431 C-terminal, D2-small domain, of ClpB protein LQZ07_00840 PF07724 AAA domain (Cdc48 subfamily) LQZ07_00850 PF04717 Type VI secretion system, phage-baseplate injector LQZ07_00850 PF06715 Gp5 C-terminal repeat (3 copies) LQZ07_00865 PF05593 RHS Repeat LQZ07_00865 PF03527 RHS protein LQZ07_00920 PF12146 Serine aminopeptidase, S33 LQZ07_00945 PF13617 YnbE-like lipoprotein LQZ07_00950 PF07027 Protein of unknown function (DUF1318) LQZ07_00980 PF02386 Cation transport protein LQZ07_00985 PF02080 TrkA-C domain LQZ07_00985 PF02254 TrkA-N domain LQZ07_00990 PF01189 16S rRNA methyltransferase RsmB/F LQZ07_00990 PF01029 NusB family LQZ07_00995 PF00551 Formyl transferase LQZ07_00995 PF02911 Formyl transferase, C-terminal domain LQZ07_01000 PF01327 Polypeptide deformylase LQZ07_01010 PF02481 DNA recombination-mediator protein A LQZ07_01010 PF17782 DprA winged helix domain LQZ07_01015 PF04361 Protein of unknown function (DUF494) LQZ07_01020 PF01396 Topoisomerase DNA binding C4 zinc finger LQZ07_01025 PF02954 Bacterial regulatory protein, Fis family LQZ07_01025 PF00072 Response regulator receiver domain LQZ07_01025 PF00158 Sigma-54 interaction domain LQZ07_01030 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_01030 PF00989 PAS fold LQZ07_01030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_01040 PF00120 Glutamine synthetase, catalytic domain LQZ07_01040 PF03951 Glutamine synthetase, beta-Grasp domain LQZ07_01045 PF00679 Elongation factor G C-terminus LQZ07_01045 PF00009 Elongation factor Tu GTP binding domain LQZ07_01045 PF03144 Elongation factor Tu domain 2 LQZ07_01055 PF13396 Phospholipase_D-nuclease N-terminal LQZ07_01055 PF13091 PLD-like domain LQZ07_01060 PF00916 Sulfate permease family LQZ07_01060 PF01740 STAS domain LQZ07_01065 PF03631 Virulence factor BrkB LQZ07_01070 PF02580 D-Tyr-tRNA(Tyr) deacylase LQZ07_01075 PF00356 Bacterial regulatory proteins, lacI family LQZ07_01080 PF00232 Glycosyl hydrolase family 1 LQZ07_01085 PF17912 MalK OB fold domain LQZ07_01085 PF00005 ABC transporter LQZ07_01090 PF06165 Glycosyltransferase family 36 LQZ07_01090 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LQZ07_01100 PF02264 LamB porin LQZ07_01105 PF07148 Maltose operon periplasmic protein precursor (MalM) LQZ07_01120 PF00583 Acetyltransferase (GNAT) family LQZ07_01120 PF09500 Putative thioesterase (yiiD_Cterm) LQZ07_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_01125 PF03466 LysR substrate binding domain LQZ07_01140 PF00892 EamA-like transporter family LQZ07_01145 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LQZ07_01150 PF01522 Polysaccharide deacetylase LQZ07_01155 PF01370 NAD dependent epimerase/dehydratase family LQZ07_01155 PF00551 Formyl transferase LQZ07_01155 PF02911 Formyl transferase, C-terminal domain LQZ07_01160 PF00535 Glycosyl transferase family 2 LQZ07_01165 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LQZ07_01175 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LQZ07_01175 PF01266 FAD dependent oxidoreductase LQZ07_01180 PF00753 Metallo-beta-lactamase superfamily LQZ07_01185 PF00455 DeoR C terminal sensor domain LQZ07_01185 PF08220 DeoR-like helix-turn-helix domain LQZ07_01190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LQZ07_01190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LQZ07_01195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_01195 PF03466 LysR substrate binding domain LQZ07_01200 PF17191 RecG wedge domain LQZ07_01200 PF00270 DEAD/DEAH box helicase LQZ07_01200 PF00271 Helicase conserved C-terminal domain LQZ07_01210 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LQZ07_01220 PF02233 NAD(P) transhydrogenase beta subunit LQZ07_01225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LQZ07_01225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LQZ07_01225 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LQZ07_01240 PF00011 Hsp20/alpha crystallin family LQZ07_01250 PF07690 Major Facilitator Superfamily LQZ07_01260 PF00462 Glutaredoxin LQZ07_01275 PF13609 Gram-negative porin LQZ07_01280 PF00696 Amino acid kinase family LQZ07_01280 PF00583 Acetyltransferase (GNAT) family LQZ07_01300 PF00873 AcrB/AcrD/AcrF family LQZ07_01305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_01310 PF02321 Outer membrane efflux protein LQZ07_01315 PF00958 GMP synthase C terminal domain LQZ07_01315 PF00117 Glutamine amidotransferase class-I LQZ07_01315 PF02540 NAD synthase LQZ07_01320 PF00171 Aldehyde dehydrogenase family LQZ07_01330 PF00491 Arginase family LQZ07_01340 PF00873 AcrB/AcrD/AcrF family LQZ07_01350 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_01355 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_01360 PF00005 ABC transporter LQZ07_01360 PF08402 TOBE domain LQZ07_01365 PF13416 Bacterial extracellular solute-binding protein LQZ07_01370 PF00202 Aminotransferase class-III LQZ07_01375 PF00120 Glutamine synthetase, catalytic domain LQZ07_01380 PF00120 Glutamine synthetase, catalytic domain LQZ07_01385 PF01266 FAD dependent oxidoreductase LQZ07_01390 PF00248 Aldo/keto reductase family LQZ07_01410 PF01645 Conserved region in glutamate synthase LQZ07_01440 PF01263 Aldose 1-epimerase LQZ07_01450 PF07969 Amidohydrolase family LQZ07_01460 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LQZ07_01465 PF17967 Pullulanase N2 domain LQZ07_01465 PF03714 Bacterial pullanase-associated domain LQZ07_01465 PF18494 Pullulanase Ins domain LQZ07_01465 PF11852 Domain of unknown function (DUF3372) LQZ07_01465 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQZ07_01475 PF06940 Domain of unknown function (DUF1287) LQZ07_01485 PF03358 NADPH-dependent FMN reductase LQZ07_01495 PF03649 Uncharacterised protein family (UPF0014) LQZ07_01500 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_01500 PF00072 Response regulator receiver domain LQZ07_01505 PF04337 Protein of unknown function, DUF480 LQZ07_01510 PF00529 HlyD membrane-fusion protein of T1SS LQZ07_01510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_01515 PF11742 Protein of unknown function (DUF3302) LQZ07_01530 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LQZ07_01530 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LQZ07_01535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LQZ07_01535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LQZ07_01540 PF01258 Prokaryotic dksA/traR C4-type zinc finger LQZ07_01545 PF13416 Bacterial extracellular solute-binding protein LQZ07_01550 PF01293 Phosphoenolpyruvate carboxykinase LQZ07_01555 PF01430 Hsp33 protein LQZ07_01560 PF01479 S4 domain LQZ07_01565 PF11356 Type II secretion system protein C LQZ07_01570 PF00263 Bacterial type II and III secretion system protein LQZ07_01570 PF03958 Bacterial type II/III secretion system short domain LQZ07_01575 PF00437 Type II/IV secretion system protein LQZ07_01580 PF00482 Type II secretion system (T2SS), protein F LQZ07_01585 PF08334 Type II secretion system (T2SS), protein G LQZ07_01585 PF07963 Prokaryotic N-terminal methylation motif LQZ07_01590 PF07963 Prokaryotic N-terminal methylation motif LQZ07_01590 PF12019 Type II transport protein GspH LQZ07_01595 PF02501 Type II secretion system (T2SS), protein I LQZ07_01595 PF07963 Prokaryotic N-terminal methylation motif LQZ07_01600 PF11612 Type II secretion system (T2SS), protein J LQZ07_01600 PF07963 Prokaryotic N-terminal methylation motif LQZ07_01605 PF03934 Type II secretion system (T2SS), protein K LQZ07_01610 PF12693 GspL periplasmic domain LQZ07_01610 PF05134 Type II secretion system (T2SS), protein L LQZ07_01615 PF04612 Type II secretion system (T2SS), protein M LQZ07_01620 PF01203 Type II secretion system (T2SS), protein N LQZ07_01625 PF13419 Haloacid dehalogenase-like hydrolase LQZ07_01630 PF00293 NUDIX domain LQZ07_01635 PF00459 Inositol monophosphatase family LQZ07_01640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQZ07_01645 PF01926 50S ribosome-binding GTPase LQZ07_01655 PF00246 Zinc carboxypeptidase LQZ07_01655 PF18027 Cytosolic carboxypeptidase N-terminal domain LQZ07_01665 PF03616 Sodium/glutamate symporter LQZ07_01670 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQZ07_01670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQZ07_01675 PF00672 HAMP domain LQZ07_01675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_01675 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_01675 PF01627 Hpt domain LQZ07_01675 PF00072 Response regulator receiver domain LQZ07_01675 PF17149 Periplasmic sensor domain found in signal transduction proteins LQZ07_01685 PF01432 Peptidase family M3 LQZ07_01690 PF00924 Mechanosensitive ion channel LQZ07_01695 PF13458 Periplasmic binding protein LQZ07_01700 PF02653 Branched-chain amino acid transport system / permease component LQZ07_01705 PF02653 Branched-chain amino acid transport system / permease component LQZ07_01705 PF11862 Domain of unknown function (DUF3382) LQZ07_01710 PF00005 ABC transporter LQZ07_01710 PF12399 Branched-chain amino acid ATP-binding cassette transporter LQZ07_01715 PF00005 ABC transporter LQZ07_01720 PF00581 Rhodanese-like domain LQZ07_01725 PF01694 Rhomboid family LQZ07_01725 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LQZ07_01735 PF04345 Chorismate lyase LQZ07_01740 PF01040 UbiA prenyltransferase family LQZ07_01745 PF01553 Acyltransferase LQZ07_01755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LQZ07_01755 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LQZ07_01760 PF01037 Lrp/AsnC ligand binding domain LQZ07_01765 PF01810 LysE type translocator LQZ07_01785 PF01726 LexA DNA binding domain LQZ07_01785 PF00717 Peptidase S24-like LQZ07_01790 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LQZ07_01790 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LQZ07_01795 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQZ07_01800 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LQZ07_01805 PF00510 Cytochrome c oxidase subunit III LQZ07_01825 PF02628 Cytochrome oxidase assembly protein LQZ07_01830 PF01040 UbiA prenyltransferase family LQZ07_01835 PF01554 MatE LQZ07_01845 PF00588 SpoU rRNA Methylase family LQZ07_01850 PF16527 Two-component sensor protein CpxA, periplasmic domain LQZ07_01850 PF00672 HAMP domain LQZ07_01850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_01850 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_01855 PF00486 Transcriptional regulatory protein, C terminal LQZ07_01855 PF00072 Response regulator receiver domain LQZ07_01860 PF07813 LTXXQ motif family protein LQZ07_01865 PF01545 Cation efflux family LQZ07_01865 PF16916 Dimerisation domain of Zinc Transporter LQZ07_01870 PF00132 Bacterial transferase hexapeptide (six repeats) LQZ07_01870 PF06426 Serine acetyltransferase, N-terminal LQZ07_01880 PF06005 Cell division protein ZapB LQZ07_01885 PF03737 Aldolase/RraA LQZ07_01890 PF00004 ATPase family associated with various cellular activities (AAA) LQZ07_01890 PF07724 AAA domain (Cdc48 subfamily) LQZ07_01890 PF10431 C-terminal, D2-small domain, of ClpB protein LQZ07_01895 PF00227 Proteasome subunit LQZ07_01920 PF05746 DALR anticodon binding domain LQZ07_01920 PF00750 tRNA synthetases class I (R) LQZ07_01920 PF03485 Arginyl tRNA synthetase N terminal domain LQZ07_01925 PF00271 Helicase conserved C-terminal domain LQZ07_01925 PF17764 3′ DNA-binding domain (3′BD) LQZ07_01925 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LQZ07_01925 PF18074 Primosomal protein N C-terminal domain LQZ07_01925 PF00270 DEAD/DEAH box helicase LQZ07_01930 PF01197 Ribosomal protein L31 LQZ07_01945 PF01340 Met Apo-repressor, MetJ LQZ07_01950 PF01053 Cys/Met metabolism PLP-dependent enzyme LQZ07_01955 PF00696 Amino acid kinase family LQZ07_01955 PF00742 Homoserine dehydrogenase LQZ07_01955 PF03447 Homoserine dehydrogenase, NAD binding domain LQZ07_01960 PF00128 Alpha amylase, catalytic domain LQZ07_01960 PF02903 Alpha amylase, N-terminal ig-like domain LQZ07_01965 PF00440 Bacterial regulatory proteins, tetR family LQZ07_01970 PF07226 Protein of unknown function (DUF1422) LQZ07_01980 PF05958 tRNA (Uracil-5-)-methyltransferase LQZ07_01990 PF00593 TonB dependent receptor LQZ07_01990 PF07715 TonB-dependent Receptor Plug Domain LQZ07_01995 PF01177 Asp/Glu/Hydantoin racemase LQZ07_02000 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LQZ07_02030 PF02107 Flagellar L-ring protein LQZ07_02045 PF00082 Subtilase family LQZ07_02045 PF04151 Bacterial pre-peptidase C-terminal domain LQZ07_02055 PF00291 Pyridoxal-phosphate dependent enzyme LQZ07_02070 PF00196 Bacterial regulatory proteins, luxR family LQZ07_02070 PF00072 Response regulator receiver domain LQZ07_02075 PF07730 Histidine kinase LQZ07_02075 PF17200 Single Cache domain 2 LQZ07_02080 PF03480 Bacterial extracellular solute-binding protein, family 7 LQZ07_02090 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LQZ07_02095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_02095 PF02743 Cache domain LQZ07_02095 PF00672 HAMP domain LQZ07_02100 PF00390 Malic enzyme, N-terminal domain LQZ07_02100 PF03949 Malic enzyme, NAD binding domain LQZ07_02105 PF02613 Nitrate reductase delta subunit LQZ07_02115 PF00384 Molybdopterin oxidoreductase LQZ07_02115 PF18364 Molybdopterin oxidoreductase N-terminal domain LQZ07_02115 PF01568 Molydopterin dinucleotide binding domain LQZ07_02120 PF03264 NapC/NirT cytochrome c family, N-terminal region LQZ07_02125 PF06796 Periplasmic nitrate reductase protein NapE LQZ07_02155 PF00501 AMP-binding enzyme LQZ07_02165 PF02492 CobW/HypB/UreG, nucleotide-binding domain LQZ07_02170 PF01730 UreF LQZ07_02175 PF05194 UreE urease accessory protein, C-terminal domain LQZ07_02175 PF02814 UreE urease accessory protein, N-terminal domain LQZ07_02180 PF01979 Amidohydrolase family LQZ07_02180 PF00449 Urease alpha-subunit, N-terminal domain LQZ07_02185 PF00699 Urease beta subunit LQZ07_02190 PF00547 Urease, gamma subunit LQZ07_02195 PF01774 UreD urease accessory protein LQZ07_02200 PF02954 Bacterial regulatory protein, Fis family LQZ07_02200 PF13188 PAS domain LQZ07_02200 PF00158 Sigma-54 interaction domain LQZ07_02205 PF02653 Branched-chain amino acid transport system / permease component LQZ07_02215 PF00005 ABC transporter LQZ07_02215 PF12399 Branched-chain amino acid ATP-binding cassette transporter LQZ07_02220 PF00005 ABC transporter LQZ07_02245 PF00196 Bacterial regulatory proteins, luxR family LQZ07_02245 PF00072 Response regulator receiver domain LQZ07_02270 PF03006 Haemolysin-III related LQZ07_02280 PF10996 Beta-Casp domain LQZ07_02280 PF00753 Metallo-beta-lactamase superfamily LQZ07_02280 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LQZ07_02285 PF02743 Cache domain LQZ07_02285 PF00672 HAMP domain LQZ07_02285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_02290 PF02872 5'-nucleotidase, C-terminal domain LQZ07_02290 PF00149 Calcineurin-like phosphoesterase LQZ07_02295 PF00999 Sodium/hydrogen exchanger family LQZ07_02295 PF02080 TrkA-C domain LQZ07_02295 PF03471 Transporter associated domain LQZ07_02300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_02300 PF03466 LysR substrate binding domain LQZ07_02305 PF07690 Major Facilitator Superfamily LQZ07_02315 PF00563 EAL domain LQZ07_02315 PF01590 GAF domain LQZ07_02315 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_02315 PF00360 Phytochrome region LQZ07_02360 PF00005 ABC transporter LQZ07_02365 PF05656 Protein of unknown function (DUF805) LQZ07_02375 PF13416 Bacterial extracellular solute-binding protein LQZ07_02380 PF00563 EAL domain LQZ07_02380 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_02380 PF03707 Bacterial signalling protein N terminal repeat LQZ07_02390 PF02653 Branched-chain amino acid transport system / permease component LQZ07_02395 PF00005 ABC transporter LQZ07_02400 PF13407 Periplasmic binding protein domain LQZ07_02405 PF13378 Enolase C-terminal domain-like LQZ07_02410 PF00378 Enoyl-CoA hydratase/isomerase LQZ07_02415 PF12697 Alpha/beta hydrolase family LQZ07_02420 PF16582 Middle domain of thiamine pyrophosphate LQZ07_02420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQZ07_02420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQZ07_02425 PF00425 chorismate binding enzyme LQZ07_02430 PF01040 UbiA prenyltransferase family LQZ07_02445 PF01964 Radical SAM ThiC family LQZ07_02445 PF13667 ThiC-associated domain LQZ07_02450 PF02581 Thiamine monophosphate synthase LQZ07_02455 PF00899 ThiF family LQZ07_02465 PF05690 Thiazole biosynthesis protein ThiG LQZ07_02470 PF04055 Radical SAM superfamily LQZ07_02470 PF06968 Biotin and Thiamin Synthesis associated domain LQZ07_02485 PF14743 DNA ligase OB-like domain LQZ07_02485 PF01068 ATP dependent DNA ligase domain LQZ07_02505 PF02780 Transketolase, C-terminal domain LQZ07_02505 PF02779 Transketolase, pyrimidine binding domain LQZ07_02505 PF00456 Transketolase, thiamine diphosphate binding domain LQZ07_02510 PF00923 Transaldolase/Fructose-6-phosphate aldolase LQZ07_02515 PF12833 Helix-turn-helix domain LQZ07_02520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LQZ07_02520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LQZ07_02525 PF12833 Helix-turn-helix domain LQZ07_02530 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LQZ07_02535 PF00440 Bacterial regulatory proteins, tetR family LQZ07_02535 PF13977 BetI-type transcriptional repressor, C-terminal LQZ07_02545 PF13460 NAD(P)H-binding LQZ07_02545 PF11066 Protein of unknown function (DUF2867) LQZ07_02555 PF03741 Integral membrane protein TerC family LQZ07_02565 PF01544 CorA-like Mg2+ transporter protein LQZ07_02570 PF01769 Divalent cation transporter LQZ07_02570 PF03448 MgtE intracellular N domain LQZ07_02570 PF00571 CBS domain LQZ07_02575 PF08443 RimK-like ATP-grasp domain LQZ07_02575 PF18030 RimK PreATP-grasp domain LQZ07_02590 PF18030 RimK PreATP-grasp domain LQZ07_02590 PF08443 RimK-like ATP-grasp domain LQZ07_02600 PF03466 LysR substrate binding domain LQZ07_02600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_02610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_02610 PF03466 LysR substrate binding domain LQZ07_02615 PF00005 ABC transporter LQZ07_02615 PF00664 ABC transporter transmembrane region LQZ07_02625 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_02630 PF00012 Hsp70 protein LQZ07_02650 PF12833 Helix-turn-helix domain LQZ07_02650 PF02311 AraC-like ligand binding domain LQZ07_02665 PF00128 Alpha amylase, catalytic domain LQZ07_02665 PF16657 Maltogenic Amylase, C-terminal domain LQZ07_02670 PF00128 Alpha amylase, catalytic domain LQZ07_02670 PF16657 Maltogenic Amylase, C-terminal domain LQZ07_02675 PF00128 Alpha amylase, catalytic domain LQZ07_02675 PF02806 Alpha amylase, C-terminal all-beta domain LQZ07_02680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQZ07_02680 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQZ07_02690 PF04143 Sulphur transport LQZ07_02700 PF00480 ROK family LQZ07_02700 PF01047 MarR family LQZ07_02710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQZ07_02710 PF17999 Pullulanase N1-terminal domain LQZ07_02710 PF00128 Alpha amylase, catalytic domain LQZ07_02715 PF03423 Carbohydrate binding domain (family 25) LQZ07_02715 PF01373 Glycosyl hydrolase family 14 LQZ07_02715 PF00128 Alpha amylase, catalytic domain LQZ07_02725 PF00580 UvrD/REP helicase N-terminal domain LQZ07_02725 PF13361 UvrD-like helicase C-terminal domain LQZ07_02730 PF00440 Bacterial regulatory proteins, tetR family LQZ07_02735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_02740 PF00873 AcrB/AcrD/AcrF family LQZ07_02745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_02745 PF00672 HAMP domain LQZ07_02750 PF00899 ThiF family LQZ07_02760 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_02775 PF08713 DNA alkylation repair enzyme LQZ07_02815 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_02830 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LQZ07_02830 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LQZ07_02835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_02835 PF03466 LysR substrate binding domain LQZ07_02840 PF04073 Aminoacyl-tRNA editing domain LQZ07_02850 PF04380 Membrane fusogenic activity LQZ07_02885 PF04151 Bacterial pre-peptidase C-terminal domain LQZ07_02885 PF01447 Thermolysin metallopeptidase, catalytic domain LQZ07_02885 PF03413 Peptidase propeptide and YPEB domain LQZ07_02885 PF07504 Fungalysin/Thermolysin Propeptide Motif LQZ07_02885 PF02868 Thermolysin metallopeptidase, alpha-helical domain LQZ07_02890 PF03512 Glycosyl hydrolase family 52 LQZ07_02895 PF02311 AraC-like ligand binding domain LQZ07_02895 PF12833 Helix-turn-helix domain LQZ07_02900 PF00005 ABC transporter LQZ07_02900 PF17912 MalK OB fold domain LQZ07_02910 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_02915 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_02935 PF00356 Bacterial regulatory proteins, lacI family LQZ07_02940 PF01474 Class-II DAHP synthetase family LQZ07_02960 PF01810 LysE type translocator LQZ07_02965 PF03466 LysR substrate binding domain LQZ07_02965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_02970 PF02595 Glycerate kinase family LQZ07_02975 PF01751 Toprim domain LQZ07_02975 PF01131 DNA topoisomerase LQZ07_02985 PF03480 Bacterial extracellular solute-binding protein, family 7 LQZ07_02995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LQZ07_03000 PF03806 AbgT putative transporter family LQZ07_03010 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_03010 PF00072 Response regulator receiver domain LQZ07_03035 PF05360 yiaA/B two helix domain LQZ07_03045 PF00933 Glycosyl hydrolase family 3 N terminal domain LQZ07_03045 PF14310 Fibronectin type III-like domain LQZ07_03045 PF01915 Glycosyl hydrolase family 3 C-terminal domain LQZ07_03075 PF00583 Acetyltransferase (GNAT) family LQZ07_03095 PF00128 Alpha amylase, catalytic domain LQZ07_03100 PF05971 RNA methyltransferase LQZ07_03115 PF00585 C-terminal regulatory domain of Threonine dehydratase LQZ07_03115 PF00291 Pyridoxal-phosphate dependent enzyme LQZ07_03120 PF00920 Dehydratase family LQZ07_03130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQZ07_03130 PF00205 Thiamine pyrophosphate enzyme, central domain LQZ07_03130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQZ07_03140 PF12464 Maltose acetyltransferase LQZ07_03140 PF14602 Hexapeptide repeat of succinyl-transferase LQZ07_03145 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LQZ07_03145 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LQZ07_03150 PF00106 short chain dehydrogenase LQZ07_03155 PF00155 Aminotransferase class I and II LQZ07_03155 PF00392 Bacterial regulatory proteins, gntR family LQZ07_03165 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LQZ07_03170 PF00005 ABC transporter LQZ07_03175 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_03190 PF00202 Aminotransferase class-III LQZ07_03195 PF00478 IMP dehydrogenase / GMP reductase domain LQZ07_03195 PF00571 CBS domain LQZ07_03200 PF13335 Magnesium chelatase, subunit ChlI C-terminal LQZ07_03200 PF01078 Magnesium chelatase, subunit ChlI LQZ07_03225 PF02899 Phage integrase, N-terminal SAM-like domain LQZ07_03225 PF00589 Phage integrase family LQZ07_03240 PF13289 SIR2-like domain LQZ07_03290 PF01381 Helix-turn-helix LQZ07_03300 PF01078 Magnesium chelatase, subunit ChlI LQZ07_03300 PF13335 Magnesium chelatase, subunit ChlI C-terminal LQZ07_03310 PF17946 RecC C-terminal domain LQZ07_03315 PF00580 UvrD/REP helicase N-terminal domain LQZ07_03315 PF12705 PD-(D/E)XK nuclease superfamily LQZ07_03315 PF13361 UvrD-like helicase C-terminal domain LQZ07_03320 PF13538 UvrD-like helicase C-terminal domain LQZ07_03335 PF00293 NUDIX domain LQZ07_03345 PF01966 HD domain LQZ07_03345 PF00672 HAMP domain LQZ07_03350 PF00557 Metallopeptidase family M24 LQZ07_03350 PF01321 Creatinase/Prolidase N-terminal domain LQZ07_03355 PF17151 Periplasmic sensor domain LQZ07_03355 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_03365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_03365 PF00672 HAMP domain LQZ07_03370 PF02541 Ppx/GppA phosphatase family LQZ07_03375 PF00909 Ammonium Transporter Family LQZ07_03385 PF07196 Flagellin hook IN motif LQZ07_03385 PF00669 Bacterial flagellin N-terminal helical region LQZ07_03385 PF00700 Bacterial flagellin C-terminal helical region LQZ07_03390 PF10678 Protein of unknown function (DUF2492) LQZ07_03395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_03395 PF00672 HAMP domain LQZ07_03395 PF02743 Cache domain LQZ07_03410 PF01914 MarC family integral membrane protein LQZ07_03430 PF00448 SRP54-type protein, GTPase domain LQZ07_03430 PF02881 SRP54-type protein, helical bundle domain LQZ07_03435 PF00005 ABC transporter LQZ07_03440 PF18075 FtsX extracellular domain LQZ07_03460 PF00069 Protein kinase domain LQZ07_03460 PF03793 PASTA domain LQZ07_03465 PF07690 Major Facilitator Superfamily LQZ07_03470 PF13806 Rieske-like [2Fe-2S] domain LQZ07_03475 PF18267 Rubredoxin NAD+ reductase C-terminal domain LQZ07_03475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LQZ07_03475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LQZ07_03475 PF04324 BFD-like [2Fe-2S] binding domain LQZ07_03475 PF13806 Rieske-like [2Fe-2S] domain LQZ07_03475 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQZ07_03480 PF10414 Sirohaem synthase dimerisation region LQZ07_03480 PF14824 Sirohaem biosynthesis protein central LQZ07_03480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LQZ07_03485 PF00140 Sigma-70 factor, region 1.2 LQZ07_03485 PF04545 Sigma-70, region 4 LQZ07_03485 PF04542 Sigma-70 region 2 LQZ07_03495 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LQZ07_03495 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LQZ07_03505 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LQZ07_03550 PF05567 Neisseria PilC beta-propeller domain LQZ07_03555 PF05567 Neisseria PilC beta-propeller domain LQZ07_03560 PF03692 Putative zinc- or iron-chelating domain LQZ07_03570 PF01551 Peptidase family M23 LQZ07_03575 PF01676 Metalloenzyme superfamily LQZ07_03575 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LQZ07_03580 PF00581 Rhodanese-like domain LQZ07_03585 PF02556 Preprotein translocase subunit SecB LQZ07_03590 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LQZ07_03590 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LQZ07_03595 PF01106 NifU-like domain LQZ07_03595 PF01521 Iron-sulphur cluster biosynthesis LQZ07_03600 PF00156 Phosphoribosyl transferase domain LQZ07_03605 PF00561 alpha/beta hydrolase fold LQZ07_03620 PF17674 HHH domain LQZ07_03620 PF00575 S1 RNA binding domain LQZ07_03620 PF09371 Tex-like protein N-terminal domain LQZ07_03620 PF16921 Tex protein YqgF-like domain LQZ07_03625 PF02018 Carbohydrate binding domain LQZ07_03625 PF02927 Cellulase N-terminal ig-like domain LQZ07_03625 PF00404 Dockerin type I domain LQZ07_03625 PF00759 Glycosyl hydrolase family 9 LQZ07_03630 PF00356 Bacterial regulatory proteins, lacI family LQZ07_03635 PF03449 Transcription elongation factor, N-terminal LQZ07_03635 PF01272 Transcription elongation factor, GreA/GreB, C-term LQZ07_03640 PF02219 Methylenetetrahydrofolate reductase LQZ07_03660 PF00311 Phosphoenolpyruvate carboxylase LQZ07_03665 PF01118 Semialdehyde dehydrogenase, NAD binding domain LQZ07_03665 PF02774 Semialdehyde dehydrogenase, dimerisation domain LQZ07_03670 PF00696 Amino acid kinase family LQZ07_03675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LQZ07_03675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LQZ07_03680 PF00764 Arginosuccinate synthase LQZ07_03685 PF00583 Acetyltransferase (GNAT) family LQZ07_03685 PF14698 Argininosuccinate lyase C-terminal LQZ07_03685 PF00206 Lyase LQZ07_03695 PF04237 YjbR LQZ07_03705 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_03705 PF00672 HAMP domain LQZ07_03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_03705 PF18698 Histidine kinase sensor domain LQZ07_03710 PF00338 Ribosomal protein S10p/S20e LQZ07_03715 PF00297 Ribosomal protein L3 LQZ07_03720 PF00573 Ribosomal protein L4/L1 family LQZ07_03725 PF00276 Ribosomal protein L23 LQZ07_03730 PF00181 Ribosomal Proteins L2, RNA binding domain LQZ07_03730 PF03947 Ribosomal Proteins L2, C-terminal domain LQZ07_03735 PF00203 Ribosomal protein S19 LQZ07_03740 PF00237 Ribosomal protein L22p/L17e LQZ07_03745 PF00189 Ribosomal protein S3, C-terminal domain LQZ07_03745 PF07650 KH domain LQZ07_03750 PF00252 Ribosomal protein L16p/L10e LQZ07_03755 PF00831 Ribosomal L29 protein LQZ07_03760 PF00366 Ribosomal protein S17 LQZ07_03765 PF13807 G-rich domain on putative tyrosine kinase LQZ07_03765 PF02706 Chain length determinant protein LQZ07_03765 PF13614 AAA domain LQZ07_03770 PF00485 Phosphoribulokinase / Uridine kinase family LQZ07_03775 PF01565 FAD binding domain LQZ07_03775 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LQZ07_03780 PF03099 Biotin/lipoate A/B protein ligase family LQZ07_03780 PF08279 HTH domain LQZ07_03780 PF02237 Biotin protein ligase C terminal domain LQZ07_03805 PF03144 Elongation factor Tu domain 2 LQZ07_03805 PF03143 Elongation factor Tu C-terminal domain LQZ07_03805 PF00009 Elongation factor Tu GTP binding domain LQZ07_03815 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LQZ07_03820 PF00467 KOW motif LQZ07_03820 PF02357 Transcription termination factor nusG LQZ07_03825 PF00298 Ribosomal protein L11, RNA binding domain LQZ07_03825 PF03946 Ribosomal protein L11, N-terminal domain LQZ07_03830 PF00687 Ribosomal protein L1p/L10e family LQZ07_03835 PF00466 Ribosomal protein L10 LQZ07_03840 PF16320 Ribosomal protein L7/L12 dimerisation domain LQZ07_03840 PF00542 Ribosomal protein L7/L12 C-terminal domain LQZ07_03845 PF04561 RNA polymerase Rpb2, domain 2 LQZ07_03845 PF04560 RNA polymerase Rpb2, domain 7 LQZ07_03845 PF00562 RNA polymerase Rpb2, domain 6 LQZ07_03845 PF10385 RNA polymerase beta subunit external 1 domain LQZ07_03845 PF04565 RNA polymerase Rpb2, domain 3 LQZ07_03845 PF04563 RNA polymerase beta subunit LQZ07_03850 PF04998 RNA polymerase Rpb1, domain 5 LQZ07_03850 PF05000 RNA polymerase Rpb1, domain 4 LQZ07_03850 PF04983 RNA polymerase Rpb1, domain 3 LQZ07_03850 PF00623 RNA polymerase Rpb1, domain 2 LQZ07_03850 PF04997 RNA polymerase Rpb1, domain 1 LQZ07_03855 PF01042 Endoribonuclease L-PSP LQZ07_03860 PF02635 DsrE/DsrF-like family LQZ07_03865 PF02635 DsrE/DsrF-like family LQZ07_03875 PF00164 Ribosomal protein S12/S23 LQZ07_03880 PF00177 Ribosomal protein S7p/S5e LQZ07_03885 PF00009 Elongation factor Tu GTP binding domain LQZ07_03885 PF00679 Elongation factor G C-terminus LQZ07_03885 PF03144 Elongation factor Tu domain 2 LQZ07_03885 PF14492 Elongation Factor G, domain II LQZ07_03885 PF03764 Elongation factor G, domain IV LQZ07_03890 PF03143 Elongation factor Tu C-terminal domain LQZ07_03890 PF03144 Elongation factor Tu domain 2 LQZ07_03890 PF00009 Elongation factor Tu GTP binding domain LQZ07_03900 PF03466 LysR substrate binding domain LQZ07_03900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_03905 PF17092 Penicillin-binding protein OB-like domain LQZ07_03905 PF00912 Transglycosylase LQZ07_03905 PF00905 Penicillin binding protein transpeptidase domain LQZ07_03910 PF11104 Type IV pilus assembly protein PilM; LQZ07_03915 PF05137 Fimbrial assembly protein (PilN) LQZ07_03920 PF04350 Pilus assembly protein, PilO LQZ07_03930 PF11741 AMIN domain LQZ07_03930 PF00263 Bacterial type II and III secretion system protein LQZ07_03930 PF07660 Secretin and TonB N terminus short domain LQZ07_03930 PF03958 Bacterial type II/III secretion system short domain LQZ07_03935 PF01202 Shikimate kinase LQZ07_03940 PF01761 3-dehydroquinate synthase LQZ07_03950 PF02086 D12 class N6 adenine-specific DNA methyltransferase LQZ07_03960 PF00834 Ribulose-phosphate 3 epimerase family LQZ07_03965 PF13419 Haloacid dehalogenase-like hydrolase LQZ07_03970 PF00579 tRNA synthetases class I (W and Y) LQZ07_03980 PF00117 Glutamine amidotransferase class-I LQZ07_03985 PF00202 Aminotransferase class-III LQZ07_03990 PF04958 Arginine N-succinyltransferase beta subunit LQZ07_03995 PF00171 Aldehyde dehydrogenase family LQZ07_04005 PF13545 Crp-like helix-turn-helix domain LQZ07_04005 PF00027 Cyclic nucleotide-binding domain LQZ07_04010 PF02566 OsmC-like protein LQZ07_04015 PF00485 Phosphoribulokinase / Uridine kinase family LQZ07_04020 PF06794 Uncharacterised protein family (UPF0270) LQZ07_04025 PF00561 alpha/beta hydrolase fold LQZ07_04030 PF00171 Aldehyde dehydrogenase family LQZ07_04050 PF00266 Aminotransferase class-V LQZ07_04055 PF01613 Flavin reductase like domain LQZ07_04060 PF00877 NlpC/P60 family LQZ07_04085 PF00563 EAL domain LQZ07_04085 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_04085 PF08448 PAS fold LQZ07_04090 PF00248 Aldo/keto reductase family LQZ07_04095 PF00248 Aldo/keto reductase family LQZ07_04100 PF03466 LysR substrate binding domain LQZ07_04100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_04115 PF07715 TonB-dependent Receptor Plug Domain LQZ07_04115 PF04886 PT repeat LQZ07_04115 PF00593 TonB dependent receptor LQZ07_04125 PF08450 SMP-30/Gluconolactonase/LRE-like region LQZ07_04195 PF04002 RadC-like JAB domain LQZ07_04235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LQZ07_04235 PF00356 Bacterial regulatory proteins, lacI family LQZ07_04240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQZ07_04240 PF00381 PTS HPr component phosphorylation site LQZ07_04250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LQZ07_04250 PF02378 Phosphotransferase system, EIIC LQZ07_04260 PF02082 Transcriptional regulator LQZ07_04265 PF00970 Oxidoreductase FAD-binding domain LQZ07_04265 PF00042 Globin LQZ07_04265 PF00175 Oxidoreductase NAD-binding domain LQZ07_04270 PF00106 short chain dehydrogenase LQZ07_04310 PF02547 Queuosine biosynthesis protein LQZ07_04315 PF03091 CutA1 divalent ion tolerance protein LQZ07_04325 PF02371 Transposase IS116/IS110/IS902 family LQZ07_04325 PF01548 Transposase LQZ07_04330 PF01548 Transposase LQZ07_04330 PF02371 Transposase IS116/IS110/IS902 family LQZ07_04340 PF03480 Bacterial extracellular solute-binding protein, family 7 LQZ07_04345 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LQZ07_04350 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LQZ07_04375 PF07995 Glucose / Sorbosone dehydrogenase LQZ07_04385 PF13276 HTH-like domain LQZ07_04385 PF00665 Integrase core domain LQZ07_04385 PF13333 Integrase core domain LQZ07_04395 PF01527 Transposase LQZ07_04400 PF01548 Transposase LQZ07_04400 PF02371 Transposase IS116/IS110/IS902 family LQZ07_04420 PF00356 Bacterial regulatory proteins, lacI family LQZ07_04425 PF00703 Glycosyl hydrolases family 2 LQZ07_04425 PF16353 Domain of unknown function(DUF4981) LQZ07_04425 PF02929 Beta galactosidase small chain LQZ07_04425 PF02837 Glycosyl hydrolases family 2, sugar binding domain LQZ07_04425 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LQZ07_04435 PF02264 LamB porin LQZ07_04440 PF16874 Glycosyl hydrolase family 36 C-terminal domain LQZ07_04440 PF16875 Glycosyl hydrolase family 36 N-terminal domain LQZ07_04450 PF03401 Tripartite tricarboxylate transporter family receptor LQZ07_04485 PF08765 Mor transcription activator family LQZ07_04490 PF00535 Glycosyl transferase family 2 LQZ07_04515 PF07030 Protein of unknown function (DUF1320) LQZ07_04530 PF17482 Phage tail sheath C-terminal domain LQZ07_04530 PF04984 Phage tail sheath protein subtilisin-like domain LQZ07_04560 PF06890 Bacteriophage Mu Gp45 protein LQZ07_04570 PF04865 Baseplate J-like protein LQZ07_04620 PF01548 Transposase LQZ07_04620 PF02371 Transposase IS116/IS110/IS902 family LQZ07_04690 PF00682 HMGL-like LQZ07_04690 PF08502 LeuA allosteric (dimerisation) domain LQZ07_04700 PF01569 PAP2 superfamily LQZ07_04715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQZ07_04715 PF00205 Thiamine pyrophosphate enzyme, central domain LQZ07_04715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQZ07_04720 PF10369 Small subunit of acetolactate synthase LQZ07_04725 PF00563 EAL domain LQZ07_04725 PF17157 Gammaproteobacterial periplasmic sensor domain LQZ07_04725 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_04750 PF00263 Bacterial type II and III secretion system protein LQZ07_04750 PF03958 Bacterial type II/III secretion system short domain LQZ07_04755 PF13401 AAA domain LQZ07_04755 PF01471 Putative peptidoglycan binding domain LQZ07_04765 PF00437 Type II/IV secretion system protein LQZ07_04765 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQZ07_04770 PF00482 Type II secretion system (T2SS), protein F LQZ07_04780 PF07963 Prokaryotic N-terminal methylation motif LQZ07_04820 PF04085 rod shape-determining protein MreC LQZ07_04825 PF04093 rod shape-determining protein MreD LQZ07_04830 PF02545 Maf-like protein LQZ07_04835 PF00575 S1 RNA binding domain LQZ07_04835 PF10150 Ribonuclease E/G family LQZ07_04840 PF13116 Protein of unknown function LQZ07_04840 PF13502 AsmA-like C-terminal region LQZ07_04845 PF00795 Carbon-nitrogen hydrolase LQZ07_04850 PF01523 Putative modulator of DNA gyrase LQZ07_04855 PF04751 Protein of unknown function (DUF615) LQZ07_04860 PF01523 Putative modulator of DNA gyrase LQZ07_04865 PF03448 MgtE intracellular N domain LQZ07_04865 PF00571 CBS domain LQZ07_04865 PF01769 Divalent cation transporter LQZ07_04870 PF00381 PTS HPr component phosphorylation site LQZ07_04875 PF03668 P-loop ATPase protein family LQZ07_04880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQZ07_04885 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LQZ07_04890 PF00309 Sigma-54 factor, Activator interacting domain (AID) LQZ07_04890 PF04963 Sigma-54 factor, core binding domain LQZ07_04890 PF04552 Sigma-54, DNA binding domain LQZ07_04895 PF00005 ABC transporter LQZ07_04895 PF12399 Branched-chain amino acid ATP-binding cassette transporter LQZ07_04900 PF03968 OstA-like protein LQZ07_04915 PF00571 CBS domain LQZ07_04915 PF01380 SIS domain LQZ07_04920 PF01699 Sodium/calcium exchanger protein LQZ07_04925 PF00005 ABC transporter LQZ07_04930 PF02405 Permease MlaE LQZ07_04935 PF02470 MlaD protein LQZ07_04940 PF05494 MlaC protein LQZ07_04950 PF01722 BolA-like protein LQZ07_04955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LQZ07_04960 PF13180 PDZ domain LQZ07_04965 PF13180 PDZ domain LQZ07_04965 PF00595 PDZ domain LQZ07_04975 PF03969 AFG1-like ATPase LQZ07_04980 PF00572 Ribosomal protein L13 LQZ07_04985 PF00380 Ribosomal protein S9/S16 LQZ07_04990 PF00355 Rieske [2Fe-2S] domain LQZ07_04990 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LQZ07_04995 PF00032 Cytochrome b(C-terminal)/b6/petD LQZ07_04995 PF00033 Cytochrome b/b6/petB LQZ07_05000 PF02167 Cytochrome C1 family LQZ07_05005 PF00043 Glutathione S-transferase, C-terminal domain LQZ07_05005 PF02798 Glutathione S-transferase, N-terminal domain LQZ07_05010 PF04386 Stringent starvation protein B LQZ07_05015 PF04972 BON domain LQZ07_05020 PF13580 SIS domain LQZ07_05025 PF02021 Uncharacterised protein family UPF0102 LQZ07_05030 PF04348 LppC putative lipoprotein LQZ07_05035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LQZ07_05045 PF02381 MraZ protein, putative antitoxin-like LQZ07_05050 PF01795 MraW methylase family LQZ07_05055 PF04999 Cell division protein FtsL LQZ07_05060 PF03717 Penicillin-binding Protein dimerisation domain LQZ07_05060 PF00905 Penicillin binding protein transpeptidase domain LQZ07_05065 PF01225 Mur ligase family, catalytic domain LQZ07_05065 PF02875 Mur ligase family, glutamate ligase domain LQZ07_05065 PF08245 Mur ligase middle domain LQZ07_05070 PF01225 Mur ligase family, catalytic domain LQZ07_05070 PF02875 Mur ligase family, glutamate ligase domain LQZ07_05070 PF08245 Mur ligase middle domain LQZ07_05075 PF00953 Glycosyl transferase family 4 LQZ07_05075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LQZ07_05080 PF02875 Mur ligase family, glutamate ligase domain LQZ07_05080 PF08245 Mur ligase middle domain LQZ07_05085 PF01098 Cell cycle protein LQZ07_05090 PF03033 Glycosyltransferase family 28 N-terminal domain LQZ07_05090 PF04101 Glycosyltransferase family 28 C-terminal domain LQZ07_05095 PF01225 Mur ligase family, catalytic domain LQZ07_05095 PF02875 Mur ligase family, glutamate ligase domain LQZ07_05095 PF08245 Mur ligase middle domain LQZ07_05100 PF07478 D-ala D-ala ligase C-terminus LQZ07_05100 PF01820 D-ala D-ala ligase N-terminus LQZ07_05105 PF03799 Cell division protein FtsQ LQZ07_05105 PF08478 POTRA domain, FtsQ-type LQZ07_05110 PF02491 SHS2 domain inserted in FTSA LQZ07_05115 PF12327 FtsZ family, C-terminal domain LQZ07_05115 PF00091 Tubulin/FtsZ family, GTPase domain LQZ07_05120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LQZ07_05130 PF01551 Peptidase family M23 LQZ07_05130 PF10145 Phage-related minor tail protein LQZ07_05130 PF01464 Transglycosylase SLT domain LQZ07_05135 PF07516 SecA Wing and Scaffold domain LQZ07_05135 PF02810 SEC-C motif LQZ07_05135 PF01043 SecA preprotein cross-linking domain LQZ07_05135 PF07517 SecA DEAD-like domain LQZ07_05140 PF00293 NUDIX domain LQZ07_05145 PF03884 DNA gyrase inhibitor YacG LQZ07_05150 PF07072 Cell division protein LQZ07_05155 PF01121 Dephospho-CoA kinase LQZ07_05160 PF06750 Bacterial Peptidase A24 N-terminal domain LQZ07_05160 PF01478 Type IV leader peptidase family LQZ07_05165 PF00482 Type II secretion system (T2SS), protein F LQZ07_05170 PF00437 Type II/IV secretion system protein LQZ07_05170 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQZ07_05180 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LQZ07_05180 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LQZ07_05185 PF01510 N-acetylmuramoyl-L-alanine amidase LQZ07_05195 PF07729 FCD domain LQZ07_05195 PF00392 Bacterial regulatory proteins, gntR family LQZ07_05200 PF17831 Pyruvate dehydrogenase E1 component middle domain LQZ07_05200 PF00456 Transketolase, thiamine diphosphate binding domain LQZ07_05205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQZ07_05205 PF00364 Biotin-requiring enzyme LQZ07_05205 PF02817 e3 binding domain LQZ07_05210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQZ07_05210 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQZ07_05215 PF01734 Patatin-like phospholipase LQZ07_05220 PF00330 Aconitase family (aconitate hydratase) LQZ07_05220 PF06434 Aconitate hydratase 2 N-terminus LQZ07_05220 PF11791 Aconitate B N-terminal domain LQZ07_05235 PF00543 Nitrogen regulatory protein P-II LQZ07_05240 PF00909 Ammonium Transporter Family LQZ07_05245 PF13416 Bacterial extracellular solute-binding protein LQZ07_05250 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_05255 PF00005 ABC transporter LQZ07_05255 PF08402 TOBE domain LQZ07_05260 PF01316 Arginine repressor, DNA binding domain LQZ07_05260 PF02863 Arginine repressor, C-terminal domain LQZ07_05265 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQZ07_05270 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LQZ07_05270 PF00056 lactate/malate dehydrogenase, NAD binding domain LQZ07_05275 PF08238 Sel1 repeat LQZ07_05280 PF00773 RNB domain LQZ07_05280 PF08206 Ribonuclease B OB domain LQZ07_05280 PF08461 Ribonuclease R winged-helix domain LQZ07_05280 PF17876 Cold shock domain LQZ07_05280 PF00575 S1 RNA binding domain LQZ07_05285 PF00588 SpoU rRNA Methylase family LQZ07_05285 PF08032 RNA 2'-O ribose methyltransferase substrate binding LQZ07_05290 PF01250 Ribosomal protein S6 LQZ07_05295 PF00436 Single-strand binding protein family LQZ07_05300 PF01084 Ribosomal protein S18 LQZ07_05305 PF03948 Ribosomal protein L9, C-terminal domain LQZ07_05305 PF01281 Ribosomal protein L9, N-terminal domain LQZ07_05310 PF13416 Bacterial extracellular solute-binding protein LQZ07_05315 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_05320 PF00005 ABC transporter LQZ07_05325 PF00034 Cytochrome c LQZ07_05330 PF00772 DnaB-like helicase N terminal domain LQZ07_05330 PF03796 DnaB-like helicase C terminal domain LQZ07_05335 PF00842 Alanine racemase, C-terminal domain LQZ07_05335 PF01168 Alanine racemase, N-terminal domain LQZ07_05340 PF00578 AhpC/TSA family LQZ07_05340 PF10417 C-terminal domain of 1-Cys peroxiredoxin LQZ07_05350 PF00535 Glycosyl transferase family 2 LQZ07_05405 PF02796 Helix-turn-helix domain of resolvase LQZ07_05405 PF00239 Resolvase, N terminal domain LQZ07_05435 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LQZ07_05440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_05440 PF03466 LysR substrate binding domain LQZ07_05450 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LQZ07_05535 PF01207 Dihydrouridine synthase (Dus) LQZ07_05545 PF02142 MGS-like domain LQZ07_05560 PF02887 Pyruvate kinase, alpha/beta domain LQZ07_05560 PF00224 Pyruvate kinase, barrel domain LQZ07_05565 PF00072 Response regulator receiver domain LQZ07_05565 PF00486 Transcriptional regulatory protein, C terminal LQZ07_05570 PF03737 Aldolase/RraA LQZ07_05580 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LQZ07_05585 PF03447 Homoserine dehydrogenase, NAD binding domain LQZ07_05585 PF00742 Homoserine dehydrogenase LQZ07_05585 PF01842 ACT domain LQZ07_05585 PF13840 ACT domain LQZ07_05585 PF00696 Amino acid kinase family LQZ07_05590 PF08544 GHMP kinases C terminal LQZ07_05590 PF00288 GHMP kinases N terminal domain LQZ07_05595 PF14821 Threonine synthase N terminus LQZ07_05595 PF00291 Pyridoxal-phosphate dependent enzyme LQZ07_05610 PF01228 Glycine radical LQZ07_05625 PF01235 Sodium:alanine symporter family LQZ07_05630 PF03652 Holliday junction resolvase LQZ07_05635 PF02622 Uncharacterized ACR, COG1678 LQZ07_05640 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LQZ07_05640 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LQZ07_05645 PF04452 RNA methyltransferase LQZ07_05655 PF10263 SprT-like family LQZ07_05655 PF17283 SprT-like zinc ribbon domain LQZ07_05660 PF02773 S-adenosylmethionine synthetase, C-terminal domain LQZ07_05660 PF02772 S-adenosylmethionine synthetase, central domain LQZ07_05660 PF00438 S-adenosylmethionine synthetase, N-terminal domain LQZ07_05675 PF02779 Transketolase, pyrimidine binding domain LQZ07_05675 PF02780 Transketolase, C-terminal domain LQZ07_05675 PF00456 Transketolase, thiamine diphosphate binding domain LQZ07_05680 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LQZ07_05680 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LQZ07_05685 PF00162 Phosphoglycerate kinase LQZ07_05690 PF01116 Fructose-bisphosphate aldolase class-II LQZ07_05700 PF03412 Peptidase C39 family LQZ07_05700 PF00664 ABC transporter transmembrane region LQZ07_05700 PF00005 ABC transporter LQZ07_05705 PF00529 HlyD membrane-fusion protein of T1SS LQZ07_05705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_05710 PF02321 Outer membrane efflux protein LQZ07_05715 PF00691 OmpA family LQZ07_05735 PF13407 Periplasmic binding protein domain LQZ07_05740 PF02653 Branched-chain amino acid transport system / permease component LQZ07_05745 PF00005 ABC transporter LQZ07_05750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQZ07_05750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LQZ07_05760 PF00356 Bacterial regulatory proteins, lacI family LQZ07_05775 PF00180 Isocitrate/isopropylmalate dehydrogenase LQZ07_05790 PF01970 Tripartite tricarboxylate transporter TctA family LQZ07_05795 PF17042 Nucleotide-binding C-terminal domain LQZ07_05795 PF07005 Sugar-binding N-terminal domain LQZ07_05800 PF00596 Class II Aldolase and Adducin N-terminal domain LQZ07_05805 PF00672 HAMP domain LQZ07_05805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_05810 PF00652 Ricin-type beta-trefoil lectin domain LQZ07_05815 PF00171 Aldehyde dehydrogenase family LQZ07_05820 PF00392 Bacterial regulatory proteins, gntR family LQZ07_05820 PF07729 FCD domain LQZ07_05825 PF00083 Sugar (and other) transporter LQZ07_05830 PF13378 Enolase C-terminal domain-like LQZ07_05830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LQZ07_05835 PF01081 KDPG and KHG aldolase LQZ07_05840 PF00294 pfkB family carbohydrate kinase LQZ07_05845 PF01232 Mannitol dehydrogenase Rossmann domain LQZ07_05845 PF08125 Mannitol dehydrogenase C-terminal domain LQZ07_05850 PF08240 Alcohol dehydrogenase GroES-like domain LQZ07_05850 PF00107 Zinc-binding dehydrogenase LQZ07_05855 PF02615 Malate/L-lactate dehydrogenase LQZ07_05860 PF17992 Agarase CBM like domain LQZ07_05860 PF02449 Beta-galactosidase LQZ07_05865 PF00356 Bacterial regulatory proteins, lacI family LQZ07_05870 PF16355 Domain of unknown function (DUF4982) LQZ07_05870 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 LQZ07_05870 PF00703 Glycosyl hydrolases family 2 LQZ07_05870 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LQZ07_05870 PF02837 Glycosyl hydrolases family 2, sugar binding domain LQZ07_05880 PF01306 LacY proton/sugar symporter LQZ07_05885 PF02264 LamB porin LQZ07_05890 PF17992 Agarase CBM like domain LQZ07_05890 PF02449 Beta-galactosidase LQZ07_05895 PF17992 Agarase CBM like domain LQZ07_05910 PF00672 HAMP domain LQZ07_05910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_05915 PF04074 YhcH/YjgK/YiaL LQZ07_05920 PF17992 Agarase CBM like domain LQZ07_05920 PF02449 Beta-galactosidase LQZ07_05930 PF04193 PQ loop repeat LQZ07_05950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQZ07_05950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQZ07_05950 PF01842 ACT domain LQZ07_05955 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LQZ07_05960 PF01812 5-formyltetrahydrofolate cyclo-ligase family LQZ07_05965 PF01709 Transcriptional regulator LQZ07_05975 PF00005 ABC transporter LQZ07_05975 PF02687 FtsX-like permease family LQZ07_05975 PF12704 MacB-like periplasmic core domain LQZ07_05980 PF00005 ABC transporter LQZ07_06015 PF00356 Bacterial regulatory proteins, lacI family LQZ07_06020 PF16875 Glycosyl hydrolase family 36 N-terminal domain LQZ07_06020 PF16874 Glycosyl hydrolase family 36 C-terminal domain LQZ07_06025 PF00474 Sodium:solute symporter family LQZ07_06030 PF00072 Response regulator receiver domain LQZ07_06030 PF04397 LytTr DNA-binding domain LQZ07_06035 PF13492 GAF domain LQZ07_06035 PF07694 5TMR of 5TMR-LYT LQZ07_06035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_06035 PF06580 Histidine kinase LQZ07_06050 PF05164 Cell division protein ZapA LQZ07_06060 PF03695 Uncharacterised protein family (UPF0149) LQZ07_06065 PF05195 Aminopeptidase P, N-terminal domain LQZ07_06065 PF00557 Metallopeptidase family M24 LQZ07_06070 PF01494 FAD binding domain LQZ07_06075 PF01494 FAD binding domain LQZ07_06090 PF01571 Aminomethyltransferase folate-binding domain LQZ07_06090 PF08669 Glycine cleavage T-protein C-terminal barrel domain LQZ07_06095 PF01597 Glycine cleavage H-protein LQZ07_06100 PF02347 Glycine cleavage system P-protein LQZ07_06115 PF13286 Phosphohydrolase-associated domain LQZ07_06115 PF01966 HD domain LQZ07_06140 PF00440 Bacterial regulatory proteins, tetR family LQZ07_06140 PF13977 BetI-type transcriptional repressor, C-terminal LQZ07_06145 PF00171 Aldehyde dehydrogenase family LQZ07_06150 PF05199 GMC oxidoreductase LQZ07_06150 PF00732 GMC oxidoreductase LQZ07_06155 PF02733 Dak1 domain LQZ07_06155 PF02734 DAK2 domain LQZ07_06160 PF00465 Iron-containing alcohol dehydrogenase LQZ07_06170 PF01022 Bacterial regulatory protein, arsR family LQZ07_06175 PF01758 Sodium Bile acid symporter family LQZ07_06180 PF03466 LysR substrate binding domain LQZ07_06180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_06185 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LQZ07_06190 PF13409 Glutathione S-transferase, N-terminal domain LQZ07_06200 PF02798 Glutathione S-transferase, N-terminal domain LQZ07_06230 PF16123 Hydroxyacylglutathione hydrolase C-terminus LQZ07_06230 PF00753 Metallo-beta-lactamase superfamily LQZ07_06240 PF00128 Alpha amylase, catalytic domain LQZ07_06240 PF11941 Domain of unknown function (DUF3459) LQZ07_06250 PF03466 LysR substrate binding domain LQZ07_06250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_06255 PF02872 5'-nucleotidase, C-terminal domain LQZ07_06255 PF00149 Calcineurin-like phosphoesterase LQZ07_06260 PF03441 FAD binding domain of DNA photolyase LQZ07_06260 PF00875 DNA photolyase LQZ07_06275 PF13419 Haloacid dehalogenase-like hydrolase LQZ07_06280 PF12464 Maltose acetyltransferase LQZ07_06280 PF00132 Bacterial transferase hexapeptide (six repeats) LQZ07_06285 PF00884 Sulfatase LQZ07_06290 PF00553 Cellulose binding domain LQZ07_06290 PF02015 Glycosyl hydrolase family 45 LQZ07_06290 PF02013 Cellulose or protein binding domain LQZ07_06310 PF00970 Oxidoreductase FAD-binding domain LQZ07_06310 PF00111 2Fe-2S iron-sulfur cluster binding domain LQZ07_06310 PF00175 Oxidoreductase NAD-binding domain LQZ07_06315 PF08240 Alcohol dehydrogenase GroES-like domain LQZ07_06315 PF00107 Zinc-binding dehydrogenase LQZ07_06325 PF03707 Bacterial signalling protein N terminal repeat LQZ07_06325 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_06325 PF00563 EAL domain LQZ07_06370 PF00881 Nitroreductase family LQZ07_06375 PF00128 Alpha amylase, catalytic domain LQZ07_06380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_06380 PF08447 PAS fold LQZ07_06410 PF00106 short chain dehydrogenase LQZ07_06415 PF07690 Major Facilitator Superfamily LQZ07_06435 PF00271 Helicase conserved C-terminal domain LQZ07_06435 PF00270 DEAD/DEAH box helicase LQZ07_06475 PF03109 ABC1 family LQZ07_06485 PF01339 CheB methylesterase LQZ07_06485 PF00072 Response regulator receiver domain LQZ07_06495 PF02634 FdhD/NarQ family LQZ07_06500 PF00384 Molybdopterin oxidoreductase LQZ07_06505 PF00563 EAL domain LQZ07_06505 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_06505 PF03707 Bacterial signalling protein N terminal repeat LQZ07_06510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_06510 PF08447 PAS fold LQZ07_06515 PF03466 LysR substrate binding domain LQZ07_06515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_06530 PF14504 CAP-associated N-terminal LQZ07_06530 PF00188 Cysteine-rich secretory protein family LQZ07_06540 PF00331 Glycosyl hydrolase family 10 LQZ07_06540 PF00395 S-layer homology domain LQZ07_06540 PF06452 Carbohydrate family 9 binding domain-like LQZ07_06540 PF02018 Carbohydrate binding domain LQZ07_06550 PF00180 Isocitrate/isopropylmalate dehydrogenase LQZ07_06555 PF03426 Carbohydrate binding domain (family 15) LQZ07_06555 PF00331 Glycosyl hydrolase family 10 LQZ07_06560 PF02264 LamB porin LQZ07_06570 PF00501 AMP-binding enzyme LQZ07_06570 PF13193 AMP-binding enzyme C-terminal domain LQZ07_06590 PF00873 AcrB/AcrD/AcrF family LQZ07_06595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_06620 PF13847 Methyltransferase domain LQZ07_06620 PF03551 Transcriptional regulator PadR-like family LQZ07_06630 PF07726 ATPase family associated with various cellular activities (AAA) LQZ07_06630 PF17863 AAA lid domain LQZ07_06640 PF11992 Domain of unknown function (DUF3488) LQZ07_06640 PF01841 Transglutaminase-like superfamily LQZ07_06640 PF13559 Domain of unknown function (DUF4129) LQZ07_06655 PF13411 MerR HTH family regulatory protein LQZ07_06660 PF00248 Aldo/keto reductase family LQZ07_06665 PF00962 Adenosine/AMP deaminase LQZ07_06670 PF01435 Peptidase family M48 LQZ07_06675 PF04011 LemA family LQZ07_06680 PF01914 MarC family integral membrane protein LQZ07_06690 PF01810 LysE type translocator LQZ07_06695 PF02311 AraC-like ligand binding domain LQZ07_06695 PF12833 Helix-turn-helix domain LQZ07_06700 PF00578 AhpC/TSA family LQZ07_06715 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LQZ07_06740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQZ07_06750 PF01638 HxlR-like helix-turn-helix LQZ07_06755 PF03441 FAD binding domain of DNA photolyase LQZ07_06755 PF00875 DNA photolyase LQZ07_06760 PF00403 Heavy-metal-associated domain LQZ07_06765 PF00376 MerR family regulatory protein LQZ07_06765 PF09278 MerR, DNA binding LQZ07_06770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_06770 PF03466 LysR substrate binding domain LQZ07_06795 PF06865 Pyrimidine/purine nucleoside phosphorylase LQZ07_06800 PF12843 Putative quorum-sensing-regulated virulence factor LQZ07_06805 PF00313 'Cold-shock' DNA-binding domain LQZ07_06820 PF00271 Helicase conserved C-terminal domain LQZ07_06820 PF00270 DEAD/DEAH box helicase LQZ07_06830 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_06835 PF01810 LysE type translocator LQZ07_06845 PF00849 RNA pseudouridylate synthase LQZ07_06850 PF02554 Carbon starvation protein CstA LQZ07_06855 PF04397 LytTr DNA-binding domain LQZ07_06855 PF00072 Response regulator receiver domain LQZ07_06860 PF06580 Histidine kinase LQZ07_06860 PF07694 5TMR of 5TMR-LYT LQZ07_06865 PF00793 DAHP synthetase I family LQZ07_06870 PF02153 Prephenate dehydrogenase LQZ07_06870 PF01817 Chorismate mutase type II LQZ07_06885 PF01336 OB-fold nucleic acid binding domain LQZ07_06885 PF00152 tRNA synthetases class II (D, K and N) LQZ07_06905 PF00128 Alpha amylase, catalytic domain LQZ07_06905 PF00686 Starch binding domain LQZ07_06910 PF00194 Eukaryotic-type carbonic anhydrase LQZ07_06920 PF02013 Cellulose or protein binding domain LQZ07_06920 PF00553 Cellulose binding domain LQZ07_06920 PF02015 Glycosyl hydrolase family 45 LQZ07_06925 PF01965 DJ-1/PfpI family LQZ07_06930 PF02558 Ketopantoate reductase PanE/ApbA LQZ07_06930 PF08546 Ketopantoate reductase PanE/ApbA C terminal LQZ07_06935 PF04461 Protein of unknown function (DUF520) LQZ07_06950 PF07690 Major Facilitator Superfamily LQZ07_06955 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LQZ07_06965 PF05175 Methyltransferase small domain LQZ07_06975 PF01722 BolA-like protein LQZ07_06985 PF11973 NQRA C-terminal domain LQZ07_06985 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LQZ07_06990 PF03116 NQR2, RnfD, RnfE family LQZ07_06995 PF04205 FMN-binding domain LQZ07_07000 PF02508 Rnf-Nqr subunit, membrane protein LQZ07_07005 PF02508 Rnf-Nqr subunit, membrane protein LQZ07_07010 PF00175 Oxidoreductase NAD-binding domain LQZ07_07010 PF00970 Oxidoreductase FAD-binding domain LQZ07_07010 PF00111 2Fe-2S iron-sulfur cluster binding domain LQZ07_07015 PF02424 ApbE family LQZ07_07040 PF00390 Malic enzyme, N-terminal domain LQZ07_07040 PF03949 Malic enzyme, NAD binding domain LQZ07_07050 PF02469 Fasciclin domain LQZ07_07060 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LQZ07_07065 PF00331 Glycosyl hydrolase family 10 LQZ07_07065 PF00756 Putative esterase LQZ07_07070 PF00248 Aldo/keto reductase family LQZ07_07075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_07075 PF03466 LysR substrate binding domain LQZ07_07080 PF17876 Cold shock domain LQZ07_07080 PF08461 Ribonuclease R winged-helix domain LQZ07_07080 PF08206 Ribonuclease B OB domain LQZ07_07080 PF00773 RNB domain LQZ07_07080 PF00575 S1 RNA binding domain LQZ07_07090 PF01931 Protein of unknown function DUF84 LQZ07_07110 PF00392 Bacterial regulatory proteins, gntR family LQZ07_07110 PF00155 Aminotransferase class I and II LQZ07_07125 PF00465 Iron-containing alcohol dehydrogenase LQZ07_07135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_07135 PF03466 LysR substrate binding domain LQZ07_07150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_07150 PF03466 LysR substrate binding domain LQZ07_07160 PF02321 Outer membrane efflux protein LQZ07_07165 PF00873 AcrB/AcrD/AcrF family LQZ07_07175 PF03466 LysR substrate binding domain LQZ07_07175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_07215 PF00440 Bacterial regulatory proteins, tetR family LQZ07_07215 PF17932 Tetracyclin repressor-like, C-terminal domain LQZ07_07220 PF00375 Sodium:dicarboxylate symporter family LQZ07_07235 PF01970 Tripartite tricarboxylate transporter TctA family LQZ07_07245 PF03401 Tripartite tricarboxylate transporter family receptor LQZ07_07250 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LQZ07_07250 PF17203 Single cache domain 3 LQZ07_07250 PF00989 PAS fold LQZ07_07250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_07255 PF17203 Single cache domain 3 LQZ07_07255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_07260 PF00072 Response regulator receiver domain LQZ07_07260 PF12431 Transcriptional regulator LQZ07_07270 PF03466 LysR substrate binding domain LQZ07_07270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_07275 PF01554 MatE LQZ07_07280 PF08240 Alcohol dehydrogenase GroES-like domain LQZ07_07280 PF00107 Zinc-binding dehydrogenase LQZ07_07290 PF00378 Enoyl-CoA hydratase/isomerase LQZ07_07315 PF03193 RsgA GTPase LQZ07_07320 PF02678 Pirin LQZ07_07320 PF17954 Quercetinase C-terminal cupin domain LQZ07_07325 PF01270 Glycosyl hydrolases family 8 LQZ07_07330 PF01270 Glycosyl hydrolases family 8 LQZ07_07335 PF00072 Response regulator receiver domain LQZ07_07335 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQZ07_07335 PF01627 Hpt domain LQZ07_07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_07335 PF00672 HAMP domain LQZ07_07335 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_07355 PF00892 EamA-like transporter family LQZ07_07360 PF09905 DNA-binding protein VF530 LQZ07_07370 PF17773 UPF0176 acylphosphatase like domain LQZ07_07370 PF00581 Rhodanese-like domain LQZ07_07375 PF01584 CheW-like domain LQZ07_07375 PF00072 Response regulator receiver domain LQZ07_07385 PF04545 Sigma-70, region 4 LQZ07_07385 PF04542 Sigma-70 region 2 LQZ07_07400 PF00106 short chain dehydrogenase LQZ07_07405 PF01593 Flavin containing amine oxidoreductase LQZ07_07435 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQZ07_07470 PF00999 Sodium/hydrogen exchanger family LQZ07_07470 PF02254 TrkA-N domain LQZ07_07475 PF02525 Flavodoxin-like fold LQZ07_07485 PF00781 Diacylglycerol kinase catalytic domain LQZ07_07505 PF08787 Alginate lyase LQZ07_07535 PF03616 Sodium/glutamate symporter LQZ07_07540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_07545 PF00873 AcrB/AcrD/AcrF family LQZ07_07560 PF14480 DNA polymerase III polC-type N-terminus I LQZ07_07560 PF11490 DNA polymerase III polC-type N-terminus II LQZ07_07560 PF07733 Bacterial DNA polymerase III alpha NTPase domain LQZ07_07560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LQZ07_07560 PF14579 Helix-hairpin-helix motif LQZ07_07560 PF02811 PHP domain LQZ07_07560 PF00929 Exonuclease LQZ07_07565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_07565 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_07570 PF00072 Response regulator receiver domain LQZ07_07570 PF00486 Transcriptional regulatory protein, C terminal LQZ07_07585 PF05987 Bacterial protein of unknown function (DUF898) LQZ07_07590 PF01435 Peptidase family M48 LQZ07_07605 PF00360 Phytochrome region LQZ07_07605 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_07605 PF01590 GAF domain LQZ07_07605 PF00563 EAL domain LQZ07_07615 PF01547 Bacterial extracellular solute-binding protein LQZ07_07640 PF13185 GAF domain LQZ07_07640 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_07650 PF00942 Cellulose binding domain LQZ07_07650 PF00041 Fibronectin type III domain LQZ07_07650 PF00553 Cellulose binding domain LQZ07_07650 PF00759 Glycosyl hydrolase family 9 LQZ07_07655 PF00041 Fibronectin type III domain LQZ07_07655 PF00553 Cellulose binding domain LQZ07_07655 PF00150 Cellulase (glycosyl hydrolase family 5) LQZ07_07660 PF00759 Glycosyl hydrolase family 9 LQZ07_07660 PF00553 Cellulose binding domain LQZ07_07660 PF00041 Fibronectin type III domain LQZ07_07660 PF00942 Cellulose binding domain LQZ07_07665 PF00271 Helicase conserved C-terminal domain LQZ07_07665 PF04851 Type III restriction enzyme, res subunit LQZ07_07700 PF03793 PASTA domain LQZ07_07700 PF00069 Protein kinase domain LQZ07_07705 PF02560 Cyanate lyase C-terminal domain LQZ07_07715 PF00571 CBS domain LQZ07_07715 PF01595 Cyclin M transmembrane N-terminal domain LQZ07_07725 PF01668 SmpB protein LQZ07_07730 PF03364 Polyketide cyclase / dehydrase and lipid transport LQZ07_07735 PF03658 RnfH family Ubiquitin LQZ07_07740 PF04355 SmpA / OmlA family LQZ07_07745 PF02463 RecF/RecN/SMC N terminal domain LQZ07_07855 PF13416 Bacterial extracellular solute-binding protein LQZ07_07860 PF00005 ABC transporter LQZ07_07860 PF08402 TOBE domain LQZ07_07865 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_07870 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_07875 PF07690 Major Facilitator Superfamily LQZ07_07885 PF00266 Aminotransferase class-V LQZ07_07895 PF01513 ATP-NAD kinase LQZ07_07900 PF01025 GrpE LQZ07_07905 PF06945 Protein of unknown function (DUF1289) LQZ07_07910 PF00484 Carbonic anhydrase LQZ07_07915 PF00375 Sodium:dicarboxylate symporter family LQZ07_07920 PF00012 Hsp70 protein LQZ07_07925 PF01556 DnaJ C terminal domain LQZ07_07925 PF00226 DnaJ domain LQZ07_07925 PF00684 DnaJ central domain LQZ07_07930 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LQZ07_07935 PF01435 Peptidase family M48 LQZ07_07940 PF13673 Acetyltransferase (GNAT) domain LQZ07_07945 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LQZ07_07945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQZ07_07955 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_07960 PF00005 ABC transporter LQZ07_07965 PF01113 Dihydrodipicolinate reductase, N-terminus LQZ07_07965 PF05173 Dihydrodipicolinate reductase, C-terminus LQZ07_07970 PF11852 Domain of unknown function (DUF3372) LQZ07_07970 PF17967 Pullulanase N2 domain LQZ07_07970 PF18494 Pullulanase Ins domain LQZ07_07970 PF03714 Bacterial pullanase-associated domain LQZ07_07970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQZ07_07975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LQZ07_07975 PF00117 Glutamine amidotransferase class-I LQZ07_07980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQZ07_07980 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LQZ07_07980 PF02142 MGS-like domain LQZ07_07985 PF01272 Transcription elongation factor, GreA/GreB, C-term LQZ07_07985 PF03449 Transcription elongation factor, N-terminal LQZ07_07990 PF13419 Haloacid dehalogenase-like hydrolase LQZ07_08000 PF01985 CRS1 / YhbY (CRM) domain LQZ07_08005 PF01728 FtsJ-like methyltransferase LQZ07_08010 PF01434 Peptidase family M41 LQZ07_08010 PF06480 FtsH Extracellular LQZ07_08010 PF00004 ATPase family associated with various cellular activities (AAA) LQZ07_08010 PF17862 AAA+ lid domain LQZ07_08015 PF00809 Pterin binding enzyme LQZ07_08020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQZ07_08020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQZ07_08020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQZ07_08020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQZ07_08025 PF03840 Preprotein translocase SecG subunit LQZ07_08040 PF17384 RimP C-terminal SH3 domain LQZ07_08040 PF02576 RimP N-terminal domain LQZ07_08045 PF08529 NusA N-terminal domain LQZ07_08045 PF00575 S1 RNA binding domain LQZ07_08045 PF13184 NusA-like KH domain LQZ07_08050 PF00009 Elongation factor Tu GTP binding domain LQZ07_08050 PF11987 Translation-initiation factor 2 LQZ07_08050 PF08364 Bacterial translation initiation factor IF-2 associated region LQZ07_08050 PF04760 Translation initiation factor IF-2, N-terminal region LQZ07_08055 PF02033 Ribosome-binding factor A LQZ07_08060 PF01509 TruB family pseudouridylate synthase (N terminal domain) LQZ07_08060 PF16198 tRNA pseudouridylate synthase B C-terminal domain LQZ07_08060 PF09157 Pseudouridine synthase II TruB, C-terminal LQZ07_08065 PF00312 Ribosomal protein S15 LQZ07_08070 PF03725 3' exoribonuclease family, domain 2 LQZ07_08070 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LQZ07_08070 PF00013 KH domain LQZ07_08070 PF01138 3' exoribonuclease family, domain 1 LQZ07_08070 PF00575 S1 RNA binding domain LQZ07_08075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LQZ07_08080 PF01464 Transglycosylase SLT domain LQZ07_08080 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQZ07_08085 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LQZ07_08085 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LQZ07_08085 PF02769 AIR synthase related protein, C-terminal domain LQZ07_08090 PF17200 Single Cache domain 2 LQZ07_08090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_08090 PF00672 HAMP domain LQZ07_08095 PF00672 HAMP domain LQZ07_08095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_08095 PF17200 Single Cache domain 2 LQZ07_08105 PF03372 Endonuclease/Exonuclease/phosphatase family LQZ07_08110 PF01476 LysM domain LQZ07_08110 PF01464 Transglycosylase SLT domain LQZ07_08115 PF00753 Metallo-beta-lactamase superfamily LQZ07_08115 PF16123 Hydroxyacylglutathione hydrolase C-terminus LQZ07_08120 PF08241 Methyltransferase domain LQZ07_08125 PF00075 RNase H LQZ07_08130 PF00929 Exonuclease LQZ07_08160 PF11849 Domain of unknown function (DUF3369) LQZ07_08165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQZ07_08165 PF02770 Acyl-CoA dehydrogenase, middle domain LQZ07_08165 PF09317 Domain of unknown function (DUF1974) LQZ07_08165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQZ07_08170 PF13580 SIS domain LQZ07_08175 PF13230 Glutamine amidotransferases class-II LQZ07_08180 PF00551 Formyl transferase LQZ07_08185 PF00586 AIR synthase related protein, N-terminal domain LQZ07_08185 PF02769 AIR synthase related protein, C-terminal domain LQZ07_08200 PF00308 Bacterial dnaA protein LQZ07_08210 PF03960 ArsC family LQZ07_08215 PF01435 Peptidase family M48 LQZ07_08215 PF07720 Tetratricopeptide repeat LQZ07_08220 PF01594 AI-2E family transporter LQZ07_08240 PF01548 Transposase LQZ07_08240 PF02371 Transposase IS116/IS110/IS902 family LQZ07_08275 PF02595 Glycerate kinase family LQZ07_08280 PF02447 GntP family permease LQZ07_08285 PF13556 PucR C-terminal helix-turn-helix domain LQZ07_08285 PF17853 GGDEF-like domain LQZ07_08285 PF05651 Putative sugar diacid recognition LQZ07_08315 PF00578 AhpC/TSA family LQZ07_08350 PF01842 ACT domain LQZ07_08355 PF06804 NlpB/DapX lipoprotein LQZ07_08360 PF07148 Maltose operon periplasmic protein precursor (MalM) LQZ07_08370 PF02557 D-alanyl-D-alanine carboxypeptidase LQZ07_08375 PF01546 Peptidase family M20/M25/M40 LQZ07_08375 PF07687 Peptidase dimerisation domain LQZ07_08380 PF03960 ArsC family LQZ07_08385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LQZ07_08390 PF02896 PEP-utilising enzyme, TIM barrel domain LQZ07_08390 PF05524 PEP-utilising enzyme, N-terminal LQZ07_08390 PF00391 PEP-utilising enzyme, mobile domain LQZ07_08395 PF00381 PTS HPr component phosphorylation site LQZ07_08400 PF00291 Pyridoxal-phosphate dependent enzyme LQZ07_08405 PF00672 HAMP domain LQZ07_08405 PF01966 HD domain LQZ07_08420 PF06470 SMC proteins Flexible Hinge Domain LQZ07_08420 PF02463 RecF/RecN/SMC N terminal domain LQZ07_08425 PF04354 ZipA, C-terminal FtsZ-binding domain LQZ07_08430 PF00533 BRCA1 C Terminus (BRCT) domain LQZ07_08430 PF01653 NAD-dependent DNA ligase adenylation domain LQZ07_08430 PF03120 NAD-dependent DNA ligase OB-fold domain LQZ07_08430 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LQZ07_08430 PF12826 Helix-hairpin-helix motif LQZ07_08435 PF01226 Formate/nitrite transporter LQZ07_08500 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQZ07_08505 PF13466 STAS domain LQZ07_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_08510 PF00072 Response regulator receiver domain LQZ07_08560 PF00005 ABC transporter LQZ07_08565 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_08570 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQZ07_08590 PF02492 CobW/HypB/UreG, nucleotide-binding domain LQZ07_08590 PF07683 Cobalamin synthesis protein cobW C-terminal domain LQZ07_08610 PF03352 Methyladenine glycosylase LQZ07_08620 PF08338 Domain of unknown function (DUF1731) LQZ07_08620 PF01370 NAD dependent epimerase/dehydratase family LQZ07_08635 PF01594 AI-2E family transporter LQZ07_08640 PF10672 S-adenosylmethionine-dependent methyltransferase LQZ07_08640 PF17785 PUA-like domain LQZ07_08645 PF07556 Protein of unknown function (DUF1538) LQZ07_08650 PF07556 Protein of unknown function (DUF1538) LQZ07_08675 PF07085 DRTGG domain LQZ07_08675 PF01515 Phosphate acetyl/butaryl transferase LQZ07_08680 PF00871 Acetokinase family LQZ07_08685 PF04217 Protein of unknown function, DUF412 LQZ07_08695 PF13847 Methyltransferase domain LQZ07_08700 PF04055 Radical SAM superfamily LQZ07_08705 PF01228 Glycine radical LQZ07_08705 PF02901 Pyruvate formate lyase-like LQZ07_08715 PF00005 ABC transporter LQZ07_08720 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQZ07_08725 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_08730 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_08735 PF01979 Amidohydrolase family LQZ07_08740 PF01053 Cys/Met metabolism PLP-dependent enzyme LQZ07_08745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQZ07_08745 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LQZ07_08770 PF01842 ACT domain LQZ07_08770 PF00551 Formyl transferase LQZ07_08775 PF02810 SEC-C motif LQZ07_08780 PF11849 Domain of unknown function (DUF3369) LQZ07_08785 PF02277 Phosphoribosyltransferase LQZ07_08790 PF02654 Cobalamin-5-phosphate synthase LQZ07_08805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LQZ07_08805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LQZ07_08820 PF03466 LysR substrate binding domain LQZ07_08820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_08825 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LQZ07_08845 PF00106 short chain dehydrogenase LQZ07_08860 PF03466 LysR substrate binding domain LQZ07_08860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_08870 PF00465 Iron-containing alcohol dehydrogenase LQZ07_08870 PF00171 Aldehyde dehydrogenase family LQZ07_08875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LQZ07_08880 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_08885 PF12911 N-terminal TM domain of oligopeptide transport permease C LQZ07_08885 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_08890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LQZ07_08890 PF00005 ABC transporter LQZ07_08895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LQZ07_08895 PF00005 ABC transporter LQZ07_08905 PF00491 Arginase family LQZ07_08925 PF02001 Protein of unknown function DUF134 LQZ07_08945 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_08950 PF12706 Beta-lactamase superfamily domain LQZ07_08980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LQZ07_08980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LQZ07_08990 PF00392 Bacterial regulatory proteins, gntR family LQZ07_08990 PF00155 Aminotransferase class I and II LQZ07_08995 PF01638 HxlR-like helix-turn-helix LQZ07_09005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQZ07_09025 PF13847 Methyltransferase domain LQZ07_09030 PF03466 LysR substrate binding domain LQZ07_09030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_09035 PF04115 Ureidoglycolate lyase LQZ07_09040 PF03561 Allantoicase repeat LQZ07_09050 PF00005 ABC transporter LQZ07_09055 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_09060 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_09080 PF00486 Transcriptional regulatory protein, C terminal LQZ07_09080 PF00072 Response regulator receiver domain LQZ07_09085 PF00672 HAMP domain LQZ07_09085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_09085 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_09085 PF00989 PAS fold LQZ07_09085 PF18698 Histidine kinase sensor domain LQZ07_09115 PF08787 Alginate lyase LQZ07_09130 PF00570 HRDC domain LQZ07_09130 PF00270 DEAD/DEAH box helicase LQZ07_09130 PF09382 RQC domain LQZ07_09130 PF16124 RecQ zinc-binding LQZ07_09130 PF00271 Helicase conserved C-terminal domain LQZ07_09140 PF12833 Helix-turn-helix domain LQZ07_09145 PF00465 Iron-containing alcohol dehydrogenase LQZ07_09165 PF02028 BCCT, betaine/carnitine/choline family transporter LQZ07_09235 PF00364 Biotin-requiring enzyme LQZ07_09235 PF00561 alpha/beta hydrolase fold LQZ07_09240 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_09240 PF13185 GAF domain LQZ07_09270 PF00474 Sodium:solute symporter family LQZ07_09280 PF01619 Proline dehydrogenase LQZ07_09280 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LQZ07_09280 PF00171 Aldehyde dehydrogenase family LQZ07_09280 PF14850 DNA-binding domain of Proline dehydrogenase LQZ07_09285 PF12833 Helix-turn-helix domain LQZ07_09290 PF00005 ABC transporter LQZ07_09290 PF12857 TOBE-like domain LQZ07_09295 PF00664 ABC transporter transmembrane region LQZ07_09295 PF00005 ABC transporter LQZ07_09300 PF13533 Biotin-lipoyl like LQZ07_09325 PF12706 Beta-lactamase superfamily domain LQZ07_09335 PF07969 Amidohydrolase family LQZ07_09340 PF00005 ABC transporter LQZ07_09345 PF00005 ABC transporter LQZ07_09350 PF06007 Phosphonate metabolism protein PhnJ LQZ07_09355 PF05861 Bacterial phosphonate metabolism protein (PhnI) LQZ07_09360 PF05845 Bacterial phosphonate metabolism protein (PhnH) LQZ07_09365 PF06754 Phosphonate metabolism protein PhnG LQZ07_09370 PF07702 UTRA domain LQZ07_09370 PF00392 Bacterial regulatory proteins, gntR family LQZ07_09375 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_09385 PF00005 ABC transporter LQZ07_09410 PF00128 Alpha amylase, catalytic domain LQZ07_09415 PF05128 Domain of unknown function (DUF697) LQZ07_09420 PF04317 YcjX-like family, DUF463 LQZ07_09425 PF00128 Alpha amylase, catalytic domain LQZ07_09430 PF12832 MFS_1 like family LQZ07_09435 PF00149 Calcineurin-like phosphoesterase LQZ07_09435 PF02872 5'-nucleotidase, C-terminal domain LQZ07_09445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LQZ07_09445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LQZ07_09455 PF00313 'Cold-shock' DNA-binding domain LQZ07_09460 PF03942 DTW domain LQZ07_09480 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LQZ07_09480 PF04616 Glycosyl hydrolases family 43 LQZ07_09485 PF12833 Helix-turn-helix domain LQZ07_09490 PF13460 NAD(P)H-binding LQZ07_09490 PF11066 Protein of unknown function (DUF2867) LQZ07_09495 PF00248 Aldo/keto reductase family LQZ07_09500 PF11898 Domain of unknown function (DUF3418) LQZ07_09500 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LQZ07_09500 PF00271 Helicase conserved C-terminal domain LQZ07_09500 PF04408 Helicase associated domain (HA2) LQZ07_09500 PF00270 DEAD/DEAH box helicase LQZ07_09505 PF01292 Prokaryotic cytochrome b561 LQZ07_09510 PF02698 DUF218 domain LQZ07_09520 PF02547 Queuosine biosynthesis protein LQZ07_09525 PF01702 Queuine tRNA-ribosyltransferase LQZ07_09530 PF02699 Preprotein translocase subunit LQZ07_09535 PF07549 SecD/SecF GG Motif LQZ07_09535 PF13721 SecD export protein N-terminal TM region LQZ07_09535 PF02355 Protein export membrane protein LQZ07_09540 PF07549 SecD/SecF GG Motif LQZ07_09540 PF02355 Protein export membrane protein LQZ07_09560 PF00459 Inositol monophosphatase family LQZ07_09565 PF00588 SpoU rRNA Methylase family LQZ07_09570 PF02082 Transcriptional regulator LQZ07_09575 PF00266 Aminotransferase class-V LQZ07_09580 PF01592 NifU-like N terminal domain LQZ07_09585 PF01521 Iron-sulphur cluster biosynthesis LQZ07_09590 PF00226 DnaJ domain LQZ07_09590 PF07743 HSCB C-terminal oligomerisation domain LQZ07_09595 PF00012 Hsp70 protein LQZ07_09600 PF00111 2Fe-2S iron-sulfur cluster binding domain LQZ07_09605 PF04384 Iron-sulphur cluster assembly LQZ07_09610 PF12404 Peptidase LQZ07_09610 PF00883 Cytosol aminopeptidase family, catalytic domain LQZ07_09615 PF00334 Nucleoside diphosphate kinase LQZ07_09620 PF04055 Radical SAM superfamily LQZ07_09630 PF13464 Domain of unknown function (DUF4115) LQZ07_09635 PF04551 GcpE protein LQZ07_09640 PF03129 Anticodon binding domain LQZ07_09640 PF13393 Histidyl-tRNA synthetase LQZ07_09650 PF13360 PQQ-like domain LQZ07_09655 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LQZ07_09655 PF01926 50S ribosome-binding GTPase LQZ07_09660 PF07191 zinc-ribbons LQZ07_09665 PF00561 alpha/beta hydrolase fold LQZ07_09670 PF02601 Exonuclease VII, large subunit LQZ07_09670 PF13742 OB-fold nucleic acid binding domain LQZ07_09675 PF00571 CBS domain LQZ07_09675 PF00478 IMP dehydrogenase / GMP reductase domain LQZ07_09680 PF02540 NAD synthase LQZ07_09680 PF00117 Glutamine amidotransferase class-I LQZ07_09680 PF00958 GMP synthase C terminal domain LQZ07_09685 PF07690 Major Facilitator Superfamily LQZ07_09690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_09690 PF03466 LysR substrate binding domain LQZ07_09695 PF04241 Protein of unknown function (DUF423) LQZ07_09700 PF01728 FtsJ-like methyltransferase LQZ07_09700 PF18125 RlmM ferredoxin-like domain LQZ07_09705 PF00180 Isocitrate/isopropylmalate dehydrogenase LQZ07_09705 PF18324 Hypothetical protein TT1725 LQZ07_09710 PF12729 Four helix bundle sensory module for signal transduction LQZ07_09710 PF00672 HAMP domain LQZ07_09710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_09715 PF01367 5'-3' exonuclease, C-terminal SAM fold LQZ07_09715 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LQZ07_09720 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LQZ07_09720 PF03641 Possible lysine decarboxylase LQZ07_09720 PF11892 Domain of unknown function (DUF3412) LQZ07_09725 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_09735 PF14489 QueF-like protein LQZ07_09735 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LQZ07_09740 PF07348 Syd protein (SUKH-2) LQZ07_09745 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) LQZ07_09760 PF04287 tRNA pseudouridine synthase C LQZ07_09765 PF00849 RNA pseudouridylate synthase LQZ07_09770 PF02264 LamB porin LQZ07_09775 PF07148 Maltose operon periplasmic protein precursor (MalM) LQZ07_09780 PF02264 LamB porin LQZ07_09785 PF00367 phosphotransferase system, EIIB LQZ07_09785 PF02378 Phosphotransferase system, EIIC LQZ07_09790 PF11944 Protein of unknown function (DUF3461) LQZ07_09795 PF14602 Hexapeptide repeat of succinyl-transferase LQZ07_09795 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LQZ07_09800 PF01842 ACT domain LQZ07_09800 PF01966 HD domain LQZ07_09800 PF01909 Nucleotidyltransferase domain LQZ07_09800 PF08335 GlnD PII-uridylyltransferase LQZ07_09805 PF00557 Metallopeptidase family M24 LQZ07_09810 PF00318 Ribosomal protein S2 LQZ07_09815 PF00889 Elongation factor TS LQZ07_09820 PF00696 Amino acid kinase family LQZ07_09825 PF01765 Ribosome recycling factor LQZ07_09830 PF01255 Putative undecaprenyl diphosphate synthase LQZ07_09840 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LQZ07_09840 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LQZ07_09840 PF13288 DXP reductoisomerase C-terminal domain LQZ07_09845 PF02163 Peptidase family M50 LQZ07_09845 PF17820 PDZ domain LQZ07_09850 PF01103 Surface antigen LQZ07_09850 PF07244 Surface antigen variable number repeat LQZ07_09855 PF03938 Outer membrane protein (OmpH-like) LQZ07_09860 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LQZ07_09860 PF00132 Bacterial transferase hexapeptide (six repeats) LQZ07_09865 PF07977 FabA-like domain LQZ07_09870 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LQZ07_09870 PF00132 Bacterial transferase hexapeptide (six repeats) LQZ07_09875 PF02684 Lipid-A-disaccharide synthetase LQZ07_09880 PF01351 Ribonuclease HII LQZ07_09885 PF07733 Bacterial DNA polymerase III alpha NTPase domain LQZ07_09885 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LQZ07_09885 PF01336 OB-fold nucleic acid binding domain LQZ07_09885 PF14579 Helix-hairpin-helix motif LQZ07_09885 PF02811 PHP domain LQZ07_09890 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LQZ07_09895 PF01171 PP-loop family LQZ07_09895 PF11734 TilS substrate C-terminal domain LQZ07_09895 PF09179 TilS substrate binding domain LQZ07_09900 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_09910 PF04073 Aminoacyl-tRNA editing domain LQZ07_09910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQZ07_09910 PF03129 Anticodon binding domain LQZ07_09915 PF14602 Hexapeptide repeat of succinyl-transferase LQZ07_09915 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LQZ07_09915 PF00132 Bacterial transferase hexapeptide (six repeats) LQZ07_09920 PF18389 TrmO C-terminal domain LQZ07_09920 PF01980 tRNA-methyltransferase O LQZ07_09930 PF09308 LuxQ, periplasmic LQZ07_09930 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_09930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_09930 PF00072 Response regulator receiver domain LQZ07_09935 PF02743 Cache domain LQZ07_09935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_09935 PF00672 HAMP domain LQZ07_09970 PF00483 Nucleotidyl transferase LQZ07_09980 PF03795 YCII-related domain LQZ07_09985 PF04279 Intracellular septation protein A LQZ07_09990 PF00290 Tryptophan synthase alpha chain LQZ07_09995 PF00291 Pyridoxal-phosphate dependent enzyme LQZ07_10000 PF00218 Indole-3-glycerol phosphate synthase LQZ07_10000 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LQZ07_10005 PF00591 Glycosyl transferase family, a/b domain LQZ07_10005 PF02885 Glycosyl transferase family, helical bundle domain LQZ07_10010 PF00591 Glycosyl transferase family, a/b domain LQZ07_10010 PF02885 Glycosyl transferase family, helical bundle domain LQZ07_10010 PF00117 Glutamine amidotransferase class-I LQZ07_10015 PF00425 chorismate binding enzyme LQZ07_10015 PF04715 Anthranilate synthase component I, N terminal region LQZ07_10020 PF02811 PHP domain LQZ07_10025 PF01300 Telomere recombination LQZ07_10030 PF02616 Segregation and condensation protein ScpA LQZ07_10035 PF04079 Segregation and condensation complex subunit ScpB LQZ07_10040 PF01479 S4 domain LQZ07_10040 PF00849 RNA pseudouridylate synthase LQZ07_10050 PF12850 Calcineurin-like phosphoesterase superfamily domain LQZ07_10055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LQZ07_10060 PF01406 tRNA synthetases class I (C) catalytic domain LQZ07_10060 PF09190 DALR domain LQZ07_10070 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LQZ07_10070 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LQZ07_10075 PF02080 TrkA-C domain LQZ07_10075 PF06826 Predicted Permease Membrane Region LQZ07_10120 PF11606 Family 31 carbohydrate binding protein LQZ07_10130 PF00356 Bacterial regulatory proteins, lacI family LQZ07_10140 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_10145 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_10150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LQZ07_10150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQZ07_10155 PF07963 Prokaryotic N-terminal methylation motif LQZ07_10160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQZ07_10160 PF05698 Bacterial trigger factor protein (TF) C-terminus LQZ07_10160 PF05697 Bacterial trigger factor protein (TF) LQZ07_10165 PF00574 Clp protease LQZ07_10170 PF06689 ClpX C4-type zinc finger LQZ07_10170 PF10431 C-terminal, D2-small domain, of ClpB protein LQZ07_10170 PF07724 AAA domain (Cdc48 subfamily) LQZ07_10180 PF03334 Na+/H+ antiporter subunit LQZ07_10185 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LQZ07_10190 PF01899 Na+/H+ ion antiporter subunit LQZ07_10195 PF00361 Proton-conducting membrane transporter LQZ07_10200 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LQZ07_10205 PF13244 Domain of unknown function (DUF4040) LQZ07_10205 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LQZ07_10205 PF00361 Proton-conducting membrane transporter LQZ07_10205 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LQZ07_10210 PF17263 Family of unknown function (DUF5329) LQZ07_10215 PF12833 Helix-turn-helix domain LQZ07_10220 PF08240 Alcohol dehydrogenase GroES-like domain LQZ07_10220 PF00107 Zinc-binding dehydrogenase LQZ07_10225 PF00756 Putative esterase LQZ07_10230 PF03425 Carbohydrate binding domain (family 11) LQZ07_10230 PF00150 Cellulase (glycosyl hydrolase family 5) LQZ07_10230 PF00404 Dockerin type I domain LQZ07_10260 PF00156 Phosphoribosyl transferase domain LQZ07_10280 PF03466 LysR substrate binding domain LQZ07_10280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_10290 PF00472 RF-1 domain LQZ07_10300 PF00881 Nitroreductase family LQZ07_10310 PF01979 Amidohydrolase family LQZ07_10315 PF00576 HIUase/Transthyretin family LQZ07_10330 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LQZ07_10330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LQZ07_10335 PF01799 [2Fe-2S] binding domain LQZ07_10335 PF00111 2Fe-2S iron-sulfur cluster binding domain LQZ07_10340 PF14226 non-haem dioxygenase in morphine synthesis N-terminal LQZ07_10340 PF03171 2OG-Fe(II) oxygenase superfamily LQZ07_10345 PF02608 ABC transporter substrate-binding protein PnrA-like LQZ07_10350 PF18040 beta porphyranase A C-terminal LQZ07_10350 PF02018 Carbohydrate binding domain LQZ07_10350 PF18206 Porphyranase catalytic subdomain 1 LQZ07_10355 PF00860 Permease family LQZ07_10375 PF00491 Arginase family LQZ07_10390 PF04955 HupE / UreJ protein LQZ07_10405 PF12167 Arm DNA-binding domain LQZ07_10405 PF00589 Phage integrase family LQZ07_10475 PF07102 Protein of unknown function (DUF1364) LQZ07_10505 PF00923 Transaldolase/Fructose-6-phosphate aldolase LQZ07_10510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQZ07_10515 PF03611 PTS system sugar-specific permease component LQZ07_10520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LQZ07_10680 PF00583 Acetyltransferase (GNAT) family LQZ07_10690 PF00149 Calcineurin-like phosphoesterase LQZ07_10690 PF02872 5'-nucleotidase, C-terminal domain LQZ07_10695 PF02653 Branched-chain amino acid transport system / permease component LQZ07_10700 PF02653 Branched-chain amino acid transport system / permease component LQZ07_10705 PF00005 ABC transporter LQZ07_10715 PF01979 Amidohydrolase family LQZ07_10730 PF01168 Alanine racemase, N-terminal domain LQZ07_10745 PF01136 Peptidase family U32 LQZ07_10745 PF12392 Collagenase LQZ07_10840 PF17151 Periplasmic sensor domain LQZ07_10840 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_10860 PF01810 LysE type translocator LQZ07_10875 PF02743 Cache domain LQZ07_10875 PF00672 HAMP domain LQZ07_10875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_10885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LQZ07_10885 PF12793 Sugar transport-related sRNA regulator N-term LQZ07_10895 PF13439 Glycosyltransferase Family 4 LQZ07_10895 PF00534 Glycosyl transferases group 1 LQZ07_10900 PF02397 Bacterial sugar transferase LQZ07_10920 PF05958 tRNA (Uracil-5-)-methyltransferase LQZ07_10925 PF08274 PhnA Zinc-Ribbon LQZ07_10925 PF03831 PhnA domain LQZ07_10930 PF00672 HAMP domain LQZ07_10930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_10930 PF17200 Single Cache domain 2 LQZ07_10940 PF00691 OmpA family LQZ07_10940 PF01389 OmpA-like transmembrane domain LQZ07_10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_10960 PF09308 LuxQ, periplasmic LQZ07_10960 PF00072 Response regulator receiver domain LQZ07_10960 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_10965 PF00158 Sigma-54 interaction domain LQZ07_10965 PF00072 Response regulator receiver domain LQZ07_10965 PF02954 Bacterial regulatory protein, Fis family LQZ07_10975 PF05724 Thiopurine S-methyltransferase (TPMT) LQZ07_10990 PF00534 Glycosyl transferases group 1 LQZ07_11000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LQZ07_11005 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_11010 PF12911 N-terminal TM domain of oligopeptide transport permease C LQZ07_11010 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_11015 PF00005 ABC transporter LQZ07_11015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LQZ07_11030 PF00857 Isochorismatase family LQZ07_11035 PF00535 Glycosyl transferase family 2 LQZ07_11045 PF00535 Glycosyl transferase family 2 LQZ07_11050 PF01501 Glycosyl transferase family 8 LQZ07_11050 PF00535 Glycosyl transferase family 2 LQZ07_11075 PF01844 HNH endonuclease LQZ07_11080 PF00679 Elongation factor G C-terminus LQZ07_11080 PF14492 Elongation Factor G, domain II LQZ07_11080 PF03764 Elongation factor G, domain IV LQZ07_11080 PF00009 Elongation factor Tu GTP binding domain LQZ07_11080 PF03144 Elongation factor Tu domain 2 LQZ07_11100 PF00672 HAMP domain LQZ07_11100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_11110 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_11115 PF07715 TonB-dependent Receptor Plug Domain LQZ07_11115 PF00593 TonB dependent receptor LQZ07_11125 PF00563 EAL domain LQZ07_11125 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_11125 PF03707 Bacterial signalling protein N terminal repeat LQZ07_11130 PF00294 pfkB family carbohydrate kinase LQZ07_11135 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LQZ07_11155 PF00474 Sodium:solute symporter family LQZ07_11165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_11165 PF03466 LysR substrate binding domain LQZ07_11175 PF02657 Fe-S metabolism associated domain LQZ07_11180 PF00266 Aminotransferase class-V LQZ07_11190 PF03600 Citrate transporter LQZ07_11195 PF04293 SpoVR like protein LQZ07_11200 PF04285 Protein of unknown function (DUF444) LQZ07_11205 PF06798 PrkA serine protein kinase C-terminal domain LQZ07_11205 PF08298 PrkA AAA domain LQZ07_11210 PF00474 Sodium:solute symporter family LQZ07_11235 PF08240 Alcohol dehydrogenase GroES-like domain LQZ07_11235 PF00107 Zinc-binding dehydrogenase LQZ07_11240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_11240 PF03466 LysR substrate binding domain LQZ07_11255 PF00106 short chain dehydrogenase LQZ07_11260 PF07729 FCD domain LQZ07_11260 PF00392 Bacterial regulatory proteins, gntR family LQZ07_11275 PF02253 Phospholipase A1 LQZ07_11285 PF05426 Alginate lyase LQZ07_11285 PF07940 Heparinase II/III-like protein LQZ07_11290 PF05426 Alginate lyase LQZ07_11290 PF07940 Heparinase II/III-like protein LQZ07_11300 PF07883 Cupin domain LQZ07_11305 PF00294 pfkB family carbohydrate kinase LQZ07_11310 PF01081 KDPG and KHG aldolase LQZ07_11315 PF14268 YoaP-like LQZ07_11315 PF00583 Acetyltransferase (GNAT) family LQZ07_11335 PF00563 EAL domain LQZ07_11335 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_11335 PF03707 Bacterial signalling protein N terminal repeat LQZ07_11350 PF00271 Helicase conserved C-terminal domain LQZ07_11350 PF00270 DEAD/DEAH box helicase LQZ07_11360 PF08502 LeuA allosteric (dimerisation) domain LQZ07_11360 PF00682 HMGL-like LQZ07_11365 PF00694 Aconitase C-terminal domain LQZ07_11370 PF00330 Aconitase family (aconitate hydratase) LQZ07_11375 PF00128 Alpha amylase, catalytic domain LQZ07_11400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LQZ07_11405 PF12792 CSS motif domain associated with EAL LQZ07_11405 PF00563 EAL domain LQZ07_11420 PF00149 Calcineurin-like phosphoesterase LQZ07_11420 PF12320 Type 5 capsule protein repressor C-terminal domain LQZ07_11425 PF13476 AAA domain LQZ07_11430 PF03502 Nucleoside-specific channel-forming protein, Tsx LQZ07_11440 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LQZ07_11450 PF01925 Sulfite exporter TauE/SafE LQZ07_11455 PF06733 DEAD_2 LQZ07_11455 PF13307 Helicase C-terminal domain LQZ07_11460 PF13609 Gram-negative porin LQZ07_11475 PF01207 Dihydrouridine synthase (Dus) LQZ07_11480 PF00156 Phosphoribosyl transferase domain LQZ07_11485 PF12169 DNA polymerase III subunits gamma and tau domain III LQZ07_11485 PF12170 DNA polymerase III tau subunit V interacting with alpha LQZ07_11490 PF02575 YbaB/EbfC DNA-binding family LQZ07_11500 PF00733 Asparagine synthase LQZ07_11500 PF13537 Glutamine amidotransferase domain LQZ07_11505 PF00999 Sodium/hydrogen exchanger family LQZ07_11510 PF13344 Haloacid dehalogenase-like hydrolase LQZ07_11520 PF00962 Adenosine/AMP deaminase LQZ07_11530 PF03279 Bacterial lipid A biosynthesis acyltransferase LQZ07_11555 PF02013 Cellulose or protein binding domain LQZ07_11555 PF00553 Cellulose binding domain LQZ07_11555 PF00331 Glycosyl hydrolase family 10 LQZ07_11565 PF00582 Universal stress protein family LQZ07_11570 PF08787 Alginate lyase LQZ07_11575 PF12850 Calcineurin-like phosphoesterase superfamily domain LQZ07_11580 PF08787 Alginate lyase LQZ07_11585 PF07470 Glycosyl Hydrolase Family 88 LQZ07_11595 PF08274 PhnA Zinc-Ribbon LQZ07_11595 PF03831 PhnA domain LQZ07_11620 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LQZ07_11625 PF00916 Sulfate permease family LQZ07_11625 PF01740 STAS domain LQZ07_11635 PF01502 Phosphoribosyl-AMP cyclohydrolase LQZ07_11635 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LQZ07_11640 PF00977 Histidine biosynthesis protein LQZ07_11645 PF00977 Histidine biosynthesis protein LQZ07_11650 PF00117 Glutamine amidotransferase class-I LQZ07_11655 PF00475 Imidazoleglycerol-phosphate dehydratase LQZ07_11655 PF08645 Polynucleotide kinase 3 phosphatase LQZ07_11660 PF00155 Aminotransferase class I and II LQZ07_11665 PF00815 Histidinol dehydrogenase LQZ07_11670 PF01634 ATP phosphoribosyltransferase LQZ07_11670 PF08029 HisG, C-terminal domain LQZ07_11680 PF04851 Type III restriction enzyme, res subunit LQZ07_11680 PF13307 Helicase C-terminal domain LQZ07_11685 PF00814 Glycoprotease family LQZ07_11695 PF00561 alpha/beta hydrolase fold LQZ07_11700 PF00501 AMP-binding enzyme LQZ07_11700 PF13193 AMP-binding enzyme C-terminal domain LQZ07_11705 PF00570 HRDC domain LQZ07_11705 PF01612 3'-5' exonuclease LQZ07_11710 PF03776 Septum formation topological specificity factor MinE LQZ07_11715 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LQZ07_11720 PF05209 Septum formation inhibitor MinC, N-terminal domain LQZ07_11720 PF03775 Septum formation inhibitor MinC, C-terminal domain LQZ07_11725 PF05166 YcgL domain LQZ07_11730 PF13406 Transglycosylase SLT domain LQZ07_11735 PF01557 Fumarylacetoacetate (FAA) hydrolase family LQZ07_11740 PF03692 Putative zinc- or iron-chelating domain LQZ07_11745 PF02600 Disulfide bond formation protein DsbB LQZ07_11750 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LQZ07_11755 PF07840 FadR C-terminal domain LQZ07_11755 PF00392 Bacterial regulatory proteins, gntR family LQZ07_11765 PF01169 Uncharacterized protein family UPF0016 LQZ07_11770 PF01253 Translation initiation factor SUI1 LQZ07_11780 PF07670 Nucleoside recognition LQZ07_11780 PF17910 FeoB cytosolic helical domain LQZ07_11780 PF07664 Ferrous iron transport protein B C terminus LQZ07_11780 PF02421 Ferrous iron transport protein B LQZ07_11795 PF12792 CSS motif domain associated with EAL LQZ07_11795 PF00563 EAL domain LQZ07_11800 PF00480 ROK family LQZ07_11800 PF01047 MarR family LQZ07_11805 PF01979 Amidohydrolase family LQZ07_11810 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LQZ07_11815 PF00367 phosphotransferase system, EIIB LQZ07_11815 PF02378 Phosphotransferase system, EIIC LQZ07_11835 PF01161 Phosphatidylethanolamine-binding protein LQZ07_11850 PF01810 LysE type translocator LQZ07_11865 PF01590 GAF domain LQZ07_11865 PF00158 Sigma-54 interaction domain LQZ07_11870 PF01557 Fumarylacetoacetate (FAA) hydrolase family LQZ07_11880 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQZ07_11880 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LQZ07_11885 PF01625 Peptide methionine sulfoxide reductase LQZ07_11905 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LQZ07_11915 PF00226 DnaJ domain LQZ07_11920 PF08007 Cupin superfamily protein LQZ07_11925 PF01259 SAICAR synthetase LQZ07_11940 PF02132 RecR protein LQZ07_11940 PF13662 Toprim domain LQZ07_11945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_11945 PF00183 Hsp90 protein LQZ07_11950 PF13416 Bacterial extracellular solute-binding protein LQZ07_11955 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_11955 PF08448 PAS fold LQZ07_11960 PF05191 Adenylate kinase, active site lid LQZ07_11965 PF00762 Ferrochelatase LQZ07_11975 PF00005 ABC transporter LQZ07_11975 PF12848 ABC transporter LQZ07_11985 PF08328 Adenylosuccinate lyase C-terminal LQZ07_11985 PF00206 Lyase LQZ07_11990 PF04356 Protein of unknown function (DUF489) LQZ07_12000 PF00849 RNA pseudouridylate synthase LQZ07_12005 PF03971 Monomeric isocitrate dehydrogenase LQZ07_12010 PF00313 'Cold-shock' DNA-binding domain LQZ07_12015 PF02617 ATP-dependent Clp protease adaptor protein ClpS LQZ07_12020 PF00004 ATPase family associated with various cellular activities (AAA) LQZ07_12020 PF07724 AAA domain (Cdc48 subfamily) LQZ07_12020 PF17871 AAA lid domain LQZ07_12020 PF02861 Clp amino terminal domain, pathogenicity island component LQZ07_12020 PF10431 C-terminal, D2-small domain, of ClpB protein LQZ07_12025 PF01176 Translation initiation factor 1A / IF-1 LQZ07_12030 PF04377 Arginine-tRNA-protein transferase, C terminus LQZ07_12030 PF04376 Arginine-tRNA-protein transferase, N terminus LQZ07_12035 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LQZ07_12040 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQZ07_12045 PF01037 Lrp/AsnC ligand binding domain LQZ07_12050 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LQZ07_12050 PF17854 FtsK alpha domain LQZ07_12050 PF09397 Ftsk gamma domain LQZ07_12050 PF01580 FtsK/SpoIIIE family LQZ07_12055 PF03548 Outer membrane lipoprotein carrier protein LolA LQZ07_12060 PF00004 ATPase family associated with various cellular activities (AAA) LQZ07_12060 PF16193 AAA C-terminal domain LQZ07_12060 PF12002 MgsA AAA+ ATPase C terminal LQZ07_12065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQZ07_12065 PF02403 Seryl-tRNA synthetase N-terminal domain LQZ07_12070 PF04358 DsrC like protein LQZ07_12075 PF12805 FUSC-like inner membrane protein yccS LQZ07_12080 PF01027 Inhibitor of apoptosis-promoting Bax1 LQZ07_12085 PF01368 DHH family LQZ07_12085 PF02833 DHHA2 domain LQZ07_12090 PF01493 GXGXG motif LQZ07_12090 PF00310 Glutamine amidotransferases class-II LQZ07_12090 PF04898 Glutamate synthase central domain LQZ07_12090 PF01645 Conserved region in glutamate synthase LQZ07_12095 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQZ07_12095 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LQZ07_12105 PF00196 Bacterial regulatory proteins, luxR family LQZ07_12105 PF00072 Response regulator receiver domain LQZ07_12110 PF01541 GIY-YIG catalytic domain LQZ07_12110 PF02151 UvrB/uvrC motif LQZ07_12110 PF08459 UvrC Helix-hairpin-helix N-terminal LQZ07_12115 PF01066 CDP-alcohol phosphatidyltransferase LQZ07_12155 PF00672 HAMP domain LQZ07_12155 PF12729 Four helix bundle sensory module for signal transduction LQZ07_12155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_12170 PF00005 ABC transporter LQZ07_12185 PF18140 Propionyl-coenzyme A carboxylase BT domain LQZ07_12185 PF00364 Biotin-requiring enzyme LQZ07_12185 PF02785 Biotin carboxylase C-terminal domain LQZ07_12185 PF00289 Biotin carboxylase, N-terminal domain LQZ07_12185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQZ07_12190 PF01425 Amidase LQZ07_12230 PF00873 AcrB/AcrD/AcrF family LQZ07_12235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_12260 PF07690 Major Facilitator Superfamily LQZ07_12275 PF02412 Thrombospondin type 3 repeat LQZ07_12275 PF03422 Carbohydrate binding module (family 6) LQZ07_12295 PF02627 Carboxymuconolactone decarboxylase family LQZ07_12310 PF03466 LysR substrate binding domain LQZ07_12310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_12315 PF07690 Major Facilitator Superfamily LQZ07_12320 PF13533 Biotin-lipoyl like LQZ07_12325 PF00873 AcrB/AcrD/AcrF family LQZ07_12335 PF00753 Metallo-beta-lactamase superfamily LQZ07_12340 PF00571 CBS domain LQZ07_12340 PF00478 IMP dehydrogenase / GMP reductase domain LQZ07_12345 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LQZ07_12345 PF07685 CobB/CobQ-like glutamine amidotransferase domain LQZ07_12355 PF03932 CutC family LQZ07_12360 PF03009 Glycerophosphoryl diester phosphodiesterase family LQZ07_12375 PF02682 Carboxyltransferase domain, subdomain C and D LQZ07_12380 PF03746 LamB/YcsF family LQZ07_12385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_12385 PF03466 LysR substrate binding domain LQZ07_12390 PF00106 short chain dehydrogenase LQZ07_12400 PF08496 Peptidase family S49 N-terminal LQZ07_12400 PF01343 Peptidase family S49 LQZ07_12405 PF04996 Succinylarginine dihydrolase LQZ07_12410 PF01396 Topoisomerase DNA binding C4 zinc finger LQZ07_12410 PF08272 Topoisomerase I zinc-ribbon-like LQZ07_12410 PF01131 DNA topoisomerase LQZ07_12410 PF01751 Toprim domain LQZ07_12460 PF03601 Conserved hypothetical protein 698 LQZ07_12465 PF01734 Patatin-like phospholipase LQZ07_12480 PF00873 AcrB/AcrD/AcrF family LQZ07_12485 PF07499 RuvA, C-terminal domain LQZ07_12485 PF01330 RuvA N terminal domain LQZ07_12490 PF05496 Holliday junction DNA helicase RuvB P-loop domain LQZ07_12490 PF17864 RuvB AAA lid domain LQZ07_12490 PF05491 RuvB C-terminal winged helix domain LQZ07_12495 PF03061 Thioesterase superfamily LQZ07_12500 PF01618 MotA/TolQ/ExbB proton channel family LQZ07_12505 PF02472 Biopolymer transport protein ExbD/TolR LQZ07_12515 PF07676 WD40-like Beta Propeller Repeat LQZ07_12515 PF04052 TolB amino-terminal domain LQZ07_12520 PF00691 OmpA family LQZ07_12525 PF16331 TolA binding protein trimerisation LQZ07_12525 PF13174 Tetratricopeptide repeat LQZ07_12565 PF02445 Quinolinate synthetase A protein LQZ07_12570 PF00478 IMP dehydrogenase / GMP reductase domain LQZ07_12580 PF00665 Integrase core domain LQZ07_12580 PF09299 Mu transposase, C-terminal LQZ07_12600 PF04851 Type III restriction enzyme, res subunit LQZ07_12610 PF01381 Helix-turn-helix LQZ07_12640 PF12161 HsdM N-terminal domain LQZ07_12640 PF02384 N-6 DNA Methylase LQZ07_12670 PF00035 Double-stranded RNA binding motif LQZ07_12670 PF14622 Ribonuclease-III-like LQZ07_12675 PF01263 Aldose 1-epimerase LQZ07_12680 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LQZ07_12680 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LQZ07_12685 PF02446 4-alpha-glucanotransferase LQZ07_12690 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQZ07_12690 PF02806 Alpha amylase, C-terminal all-beta domain LQZ07_12690 PF00128 Alpha amylase, catalytic domain LQZ07_12695 PF00128 Alpha amylase, catalytic domain LQZ07_12695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQZ07_12700 PF01641 SelR domain LQZ07_12710 PF07023 Protein of unknown function (DUF1315) LQZ07_12715 PF00710 Asparaginase, N-terminal LQZ07_12715 PF17763 Glutaminase/Asparaginase C-terminal domain LQZ07_12720 PF01343 Peptidase family S49 LQZ07_12725 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQZ07_12725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQZ07_12730 PF00881 Nitroreductase family LQZ07_12745 PF10124 Mu-like prophage major head subunit gpT LQZ07_12770 PF00152 tRNA synthetases class II (D, K and N) LQZ07_12770 PF01336 OB-fold nucleic acid binding domain LQZ07_12780 PF00202 Aminotransferase class-III LQZ07_12785 PF06968 Biotin and Thiamin Synthesis associated domain LQZ07_12785 PF04055 Radical SAM superfamily LQZ07_12790 PF00155 Aminotransferase class I and II LQZ07_12795 PF08241 Methyltransferase domain LQZ07_12805 PF01435 Peptidase family M48 LQZ07_12815 PF03707 Bacterial signalling protein N terminal repeat LQZ07_12815 PF00563 EAL domain LQZ07_12815 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_12820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQZ07_12820 PF00403 Heavy-metal-associated domain LQZ07_12820 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQZ07_12825 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LQZ07_12830 PF01103 Surface antigen LQZ07_12830 PF07244 Surface antigen variable number repeat LQZ07_12830 PF17243 POTRA domain TamA domain 1 LQZ07_12835 PF04357 TamB, inner membrane protein subunit of TAM complex LQZ07_12850 PF00085 Thioredoxin LQZ07_12855 PF00072 Response regulator receiver domain LQZ07_12865 PF02646 RmuC family LQZ07_12870 PF00128 Alpha amylase, catalytic domain LQZ07_12870 PF02903 Alpha amylase, N-terminal ig-like domain LQZ07_12875 PF08448 PAS fold LQZ07_12875 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_12880 PF00849 RNA pseudouridylate synthase LQZ07_12880 PF01479 S4 domain LQZ07_12895 PF00529 HlyD membrane-fusion protein of T1SS LQZ07_12895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_12900 PF00873 AcrB/AcrD/AcrF family LQZ07_12905 PF00072 Response regulator receiver domain LQZ07_12910 PF02441 Flavoprotein LQZ07_12915 PF01475 Ferric uptake regulator family LQZ07_12925 PF01464 Transglycosylase SLT domain LQZ07_12930 PF00258 Flavodoxin LQZ07_12935 PF01402 Ribbon-helix-helix protein, copG family LQZ07_12945 PF12697 Alpha/beta hydrolase family LQZ07_12950 PF03925 SeqA protein C-terminal domain LQZ07_12950 PF17206 SeqA protein N-terminal domain LQZ07_12955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQZ07_12955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQZ07_12955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQZ07_12955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQZ07_12960 PF00343 Carbohydrate phosphorylase LQZ07_12965 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LQZ07_12970 PF01565 FAD binding domain LQZ07_12970 PF13183 4Fe-4S dicluster domain LQZ07_12970 PF02913 FAD linked oxidases, C-terminal domain LQZ07_12975 PF03061 Thioesterase superfamily LQZ07_12990 PF00873 AcrB/AcrD/AcrF family LQZ07_13000 PF00106 short chain dehydrogenase LQZ07_13025 PF10672 S-adenosylmethionine-dependent methyltransferase LQZ07_13025 PF02926 THUMP domain LQZ07_13025 PF01170 Putative RNA methylase family UPF0020 LQZ07_13035 PF00005 ABC transporter LQZ07_13035 PF16326 ABC transporter C-terminal domain LQZ07_13035 PF12848 ABC transporter LQZ07_13045 PF04957 Ribosome modulation factor LQZ07_13050 PF07977 FabA-like domain LQZ07_13055 PF05362 Lon protease (S16) C-terminal proteolytic domain LQZ07_13055 PF13654 AAA domain LQZ07_13060 PF13726 Na+-H+ antiporter family LQZ07_13060 PF03553 Na+/H+ antiporter family LQZ07_13065 PF00929 Exonuclease LQZ07_13070 PF18393 MotY N-terminal domain LQZ07_13070 PF00691 OmpA family LQZ07_13080 PF10576 Iron-sulfur binding domain of endonuclease III LQZ07_13080 PF00633 Helix-hairpin-helix motif LQZ07_13080 PF00730 HhH-GPD superfamily base excision DNA repair protein LQZ07_13085 PF02508 Rnf-Nqr subunit, membrane protein LQZ07_13090 PF04205 FMN-binding domain LQZ07_13095 PF03116 NQR2, RnfD, RnfE family LQZ07_13100 PF13375 RnfC Barrel sandwich hybrid domain LQZ07_13100 PF10531 SLBB domain LQZ07_13100 PF12838 4Fe-4S dicluster domain LQZ07_13100 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LQZ07_13105 PF04060 Putative Fe-S cluster LQZ07_13110 PF02508 Rnf-Nqr subunit, membrane protein LQZ07_13115 PF03477 ATP cone domain LQZ07_13115 PF13597 Anaerobic ribonucleoside-triphosphate reductase LQZ07_13125 PF00563 EAL domain LQZ07_13125 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_13125 PF13426 PAS domain LQZ07_13155 PF12344 Ultra-violet resistance protein B LQZ07_13155 PF00271 Helicase conserved C-terminal domain LQZ07_13155 PF04851 Type III restriction enzyme, res subunit LQZ07_13155 PF02151 UvrB/uvrC motif LQZ07_13155 PF17757 UvrB interaction domain LQZ07_13160 PF00121 Triosephosphate isomerase LQZ07_13165 PF02698 DUF218 domain LQZ07_13170 PF00155 Aminotransferase class I and II LQZ07_13175 PF00072 Response regulator receiver domain LQZ07_13175 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_13180 PF11849 Domain of unknown function (DUF3369) LQZ07_13190 PF02810 SEC-C motif LQZ07_13190 PF07516 SecA Wing and Scaffold domain LQZ07_13190 PF01043 SecA preprotein cross-linking domain LQZ07_13190 PF07517 SecA DEAD-like domain LQZ07_13195 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LQZ07_13225 PF00005 ABC transporter LQZ07_13230 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_13235 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_13240 PF07969 Amidohydrolase family LQZ07_13260 PF00873 AcrB/AcrD/AcrF family LQZ07_13265 PF00529 HlyD membrane-fusion protein of T1SS LQZ07_13265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_13270 PF00529 HlyD membrane-fusion protein of T1SS LQZ07_13270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_13290 PF10928 Protein of unknown function (DUF2810) LQZ07_13305 PF00072 Response regulator receiver domain LQZ07_13310 PF00072 Response regulator receiver domain LQZ07_13315 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQZ07_13330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQZ07_13330 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LQZ07_13340 PF00403 Heavy-metal-associated domain LQZ07_13355 PF00325 Bacterial regulatory proteins, crp family LQZ07_13355 PF00027 Cyclic nucleotide-binding domain LQZ07_13360 PF00582 Universal stress protein family LQZ07_13365 PF01171 PP-loop family LQZ07_13370 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LQZ07_13375 PF02146 Sir2 family LQZ07_13380 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQZ07_13385 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_13390 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_13395 PF00005 ABC transporter LQZ07_13400 PF00216 Bacterial DNA-binding protein LQZ07_13405 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LQZ07_13405 PF01588 Putative tRNA binding domain LQZ07_13405 PF03484 tRNA synthetase B5 domain LQZ07_13405 PF03483 B3/4 domain LQZ07_13405 PF03147 Ferredoxin-fold anticodon binding domain LQZ07_13410 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LQZ07_13410 PF01409 tRNA synthetases class II core domain (F) LQZ07_13415 PF00453 Ribosomal protein L20 LQZ07_13420 PF01632 Ribosomal protein L35 LQZ07_13425 PF00707 Translation initiation factor IF-3, C-terminal domain LQZ07_13425 PF05198 Translation initiation factor IF-3, N-terminal domain LQZ07_13430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LQZ07_13430 PF03129 Anticodon binding domain LQZ07_13430 PF02824 TGS domain LQZ07_13430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQZ07_13440 PF00677 Lumazine binding domain LQZ07_13445 PF01554 MatE LQZ07_13465 PF00005 ABC transporter LQZ07_13465 PF03459 TOBE domain LQZ07_13470 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_13480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_13480 PF03459 TOBE domain LQZ07_13485 PF04891 NifQ LQZ07_13490 PF12838 4Fe-4S dicluster domain LQZ07_13495 PF02579 Dinitrogenase iron-molybdenum cofactor LQZ07_13495 PF04055 Radical SAM superfamily LQZ07_13505 PF13185 GAF domain LQZ07_13505 PF02954 Bacterial regulatory protein, Fis family LQZ07_13505 PF00158 Sigma-54 interaction domain LQZ07_13510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_13510 PF00989 PAS fold LQZ07_13515 PF02508 Rnf-Nqr subunit, membrane protein LQZ07_13520 PF04060 Putative Fe-S cluster LQZ07_13525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LQZ07_13525 PF13237 4Fe-4S dicluster domain LQZ07_13525 PF13375 RnfC Barrel sandwich hybrid domain LQZ07_13525 PF10531 SLBB domain LQZ07_13530 PF03116 NQR2, RnfD, RnfE family LQZ07_13535 PF04205 FMN-binding domain LQZ07_13540 PF02508 Rnf-Nqr subunit, membrane protein LQZ07_13545 PF03658 RnfH family Ubiquitin LQZ07_13550 PF00258 Flavodoxin LQZ07_13565 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LQZ07_13570 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LQZ07_13580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LQZ07_13590 PF12833 Helix-turn-helix domain LQZ07_13620 PF02416 mttA/Hcf106 family LQZ07_13635 PF00639 PPIC-type PPIASE domain LQZ07_13640 PF04319 NifZ domain LQZ07_13645 PF03206 Nitrogen fixation protein NifW LQZ07_13650 PF00682 HMGL-like LQZ07_13655 PF00266 Aminotransferase class-V LQZ07_13660 PF01106 NifU-like domain LQZ07_13660 PF04324 BFD-like [2Fe-2S] binding domain LQZ07_13660 PF01592 NifU-like N terminal domain LQZ07_13665 PF00722 Glycosyl hydrolases family 16 LQZ07_13685 PF13237 4Fe-4S dicluster domain LQZ07_13695 PF00148 Nitrogenase component 1 type Oxidoreductase LQZ07_13700 PF00148 Nitrogenase component 1 type Oxidoreductase LQZ07_13705 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_13735 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal LQZ07_13735 PF02579 Dinitrogenase iron-molybdenum cofactor LQZ07_13740 PF06988 NifT/FixU protein LQZ07_13745 PF00148 Nitrogenase component 1 type Oxidoreductase LQZ07_13745 PF11844 Domain of unknown function (DUF3364) LQZ07_13750 PF00148 Nitrogenase component 1 type Oxidoreductase LQZ07_13755 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family LQZ07_13765 PF03412 Peptidase C39 family LQZ07_13765 PF00664 ABC transporter transmembrane region LQZ07_13765 PF00005 ABC transporter LQZ07_13770 PF00529 HlyD membrane-fusion protein of T1SS LQZ07_13775 PF02321 Outer membrane efflux protein LQZ07_13795 PF00294 pfkB family carbohydrate kinase LQZ07_13800 PF08240 Alcohol dehydrogenase GroES-like domain LQZ07_13800 PF00107 Zinc-binding dehydrogenase LQZ07_13805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQZ07_13805 PF00381 PTS HPr component phosphorylation site LQZ07_13805 PF00391 PEP-utilising enzyme, mobile domain LQZ07_13805 PF05524 PEP-utilising enzyme, N-terminal LQZ07_13805 PF02896 PEP-utilising enzyme, TIM barrel domain LQZ07_13820 PF00455 DeoR C terminal sensor domain LQZ07_13820 PF08220 DeoR-like helix-turn-helix domain LQZ07_13825 PF00873 AcrB/AcrD/AcrF family LQZ07_13835 PF00529 HlyD membrane-fusion protein of T1SS LQZ07_13835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_13850 PF00654 Voltage gated chloride channel LQZ07_13855 PF00202 Aminotransferase class-III LQZ07_13860 PF00171 Aldehyde dehydrogenase family LQZ07_13865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_13865 PF03466 LysR substrate binding domain LQZ07_13875 PF03313 Serine dehydratase alpha chain LQZ07_13880 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LQZ07_13880 PF12557 Cob(I)alamin adenosyltransferase N terminal LQZ07_13885 PF00773 RNB domain LQZ07_13885 PF08206 Ribonuclease B OB domain LQZ07_13885 PF17876 Cold shock domain LQZ07_13890 PF03572 Peptidase family S41 LQZ07_13890 PF11818 C-terminal domain of tail specific protease (DUF3340) LQZ07_13890 PF00595 PDZ domain LQZ07_13890 PF17804 Tail specific protease N-terminal domain LQZ07_13895 PF17516 ProQ C-terminal domain LQZ07_13895 PF04352 ProQ/FINO family LQZ07_13900 PF13185 GAF domain LQZ07_13905 PF07130 YebG protein LQZ07_13915 PF04403 Paraquat-inducible protein A LQZ07_13920 PF02470 MlaD protein LQZ07_13925 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LQZ07_13925 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LQZ07_13925 PF01189 16S rRNA methyltransferase RsmB/F LQZ07_13930 PF01026 TatD related DNase LQZ07_13935 PF09115 DNA polymerase III, delta subunit, C terminal LQZ07_13940 PF02223 Thymidylate kinase LQZ07_13945 PF02618 YceG-like family LQZ07_13950 PF01063 Amino-transferase class IV LQZ07_13955 PF00109 Beta-ketoacyl synthase, N-terminal domain LQZ07_13955 PF02801 Beta-ketoacyl synthase, C-terminal domain LQZ07_13960 PF00550 Phosphopantetheine attachment site LQZ07_13970 PF00698 Acyl transferase domain LQZ07_13975 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LQZ07_13975 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LQZ07_13980 PF02504 Fatty acid synthesis protein LQZ07_13985 PF01783 Ribosomal L32p protein family LQZ07_13990 PF02620 Large ribosomal RNA subunit accumulation protein YceD LQZ07_13995 PF02545 Maf-like protein LQZ07_14000 PF00849 RNA pseudouridylate synthase LQZ07_14000 PF01479 S4 domain LQZ07_14005 PF12111 Polyribonucleotide phosphorylase C terminal LQZ07_14005 PF10150 Ribonuclease E/G family LQZ07_14005 PF00575 S1 RNA binding domain LQZ07_14010 PF01451 Low molecular weight phosphotyrosine protein phosphatase LQZ07_14020 PF00485 Phosphoribulokinase / Uridine kinase family LQZ07_14025 PF01588 Putative tRNA binding domain LQZ07_14025 PF09334 tRNA synthetases class I (M) LQZ07_14030 PF00708 Acylphosphatase LQZ07_14040 PF00994 Probable molybdopterin binding domain LQZ07_14040 PF03454 MoeA C-terminal region (domain IV) LQZ07_14040 PF03453 MoeA N-terminal region (domain I and II) LQZ07_14045 PF00005 ABC transporter LQZ07_14045 PF08402 TOBE domain LQZ07_14050 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_14060 PF02391 MoaE protein LQZ07_14065 PF02597 ThiS family LQZ07_14070 PF01967 MoaC family LQZ07_14075 PF00994 Probable molybdopterin binding domain LQZ07_14080 PF12804 MobA-like NTP transferase domain LQZ07_14090 PF03264 NapC/NirT cytochrome c family, N-terminal region LQZ07_14095 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LQZ07_14100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LQZ07_14100 PF00384 Molybdopterin oxidoreductase LQZ07_14100 PF01568 Molydopterin dinucleotide binding domain LQZ07_14100 PF10518 TAT (twin-arginine translocation) pathway signal sequence LQZ07_14110 PF00037 4Fe-4S binding domain LQZ07_14110 PF12800 4Fe-4S binding domain LQZ07_14110 PF13187 4Fe-4S dicluster domain LQZ07_14115 PF06463 Molybdenum Cofactor Synthesis C LQZ07_14115 PF04055 Radical SAM superfamily LQZ07_14120 PF00672 HAMP domain LQZ07_14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_14120 PF07730 Histidine kinase LQZ07_14120 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LQZ07_14125 PF00072 Response regulator receiver domain LQZ07_14125 PF00196 Bacterial regulatory proteins, luxR family LQZ07_14130 PF08497 Radical SAM N-terminal LQZ07_14130 PF11842 Domain of unknown function (DUF3362) LQZ07_14130 PF04055 Radical SAM superfamily LQZ07_14135 PF13091 PLD-like domain LQZ07_14140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQZ07_14145 PF07690 Major Facilitator Superfamily LQZ07_14165 PF13091 PLD-like domain LQZ07_14180 PF00529 HlyD membrane-fusion protein of T1SS LQZ07_14180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_14195 PF03466 LysR substrate binding domain LQZ07_14195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_14205 PF08543 Phosphomethylpyrimidine kinase LQZ07_14215 PF06826 Predicted Permease Membrane Region LQZ07_14220 PF00282 Pyridoxal-dependent decarboxylase conserved domain LQZ07_14245 PF01238 Phosphomannose isomerase type I LQZ07_14250 PF02595 Glycerate kinase family LQZ07_14255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQZ07_14255 PF02378 Phosphotransferase system, EIIC LQZ07_14255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LQZ07_14260 PF00128 Alpha amylase, catalytic domain LQZ07_14265 PF01074 Glycosyl hydrolases family 38 N-terminal domain LQZ07_14265 PF09261 Alpha mannosidase middle domain LQZ07_14265 PF07748 Glycosyl hydrolases family 38 C-terminal domain LQZ07_14270 PF02378 Phosphotransferase system, EIIC LQZ07_14275 PF01380 SIS domain LQZ07_14275 PF01418 Helix-turn-helix domain, rpiR family LQZ07_14305 PF03616 Sodium/glutamate symporter LQZ07_14330 PF00672 HAMP domain LQZ07_14330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQZ07_14330 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_14330 PF01627 Hpt domain LQZ07_14330 PF00072 Response regulator receiver domain LQZ07_14330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_14335 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQZ07_14335 PF01627 Hpt domain LQZ07_14335 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_14335 PF00072 Response regulator receiver domain LQZ07_14335 PF00672 HAMP domain LQZ07_14335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_14340 PF00704 Glycosyl hydrolases family 18 LQZ07_14405 PF00072 Response regulator receiver domain LQZ07_14405 PF00486 Transcriptional regulatory protein, C terminal LQZ07_14425 PF07995 Glucose / Sorbosone dehydrogenase LQZ07_14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_14430 PF03466 LysR substrate binding domain LQZ07_14435 PF12706 Beta-lactamase superfamily domain LQZ07_14480 PF18766 SWI2/SNF2 ATPase LQZ07_14480 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LQZ07_14480 PF11867 Domain of unknown function (DUF3387) LQZ07_14490 PF01420 Type I restriction modification DNA specificity domain LQZ07_14500 PF02384 N-6 DNA Methylase LQZ07_14505 PF04076 Bacterial OB fold (BOF) protein LQZ07_14520 PF13356 Arm DNA-binding domain LQZ07_14520 PF00589 Phage integrase family LQZ07_14530 PF02685 Glucokinase LQZ07_14535 PF01380 SIS domain LQZ07_14535 PF01418 Helix-turn-helix domain, rpiR family LQZ07_14540 PF02770 Acyl-CoA dehydrogenase, middle domain LQZ07_14540 PF09317 Domain of unknown function (DUF1974) LQZ07_14540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQZ07_14540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQZ07_14545 PF00440 Bacterial regulatory proteins, tetR family LQZ07_14560 PF05114 Protein of unknown function (DUF692) LQZ07_14575 PF05681 Fumarate hydratase (Fumerase) LQZ07_14575 PF05683 Fumarase C-terminus LQZ07_14580 PF04715 Anthranilate synthase component I, N terminal region LQZ07_14580 PF00425 chorismate binding enzyme LQZ07_14590 PF03315 Serine dehydratase beta chain LQZ07_14590 PF03313 Serine dehydratase alpha chain LQZ07_14610 PF00924 Mechanosensitive ion channel LQZ07_14635 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_14640 PF03466 LysR substrate binding domain LQZ07_14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_14650 PF00005 ABC transporter LQZ07_14655 PF13472 GDSL-like Lipase/Acylhydrolase family LQZ07_14660 PF07126 Cell-division protein ZapC LQZ07_14665 PF01180 Dihydroorotate dehydrogenase LQZ07_14670 PF05088 Bacterial NAD-glutamate dehydrogenase LQZ07_14680 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LQZ07_14680 PF01433 Peptidase family M1 domain LQZ07_14680 PF11940 Domain of unknown function (DUF3458) Ig-like fold LQZ07_14685 PF00209 Sodium:neurotransmitter symporter family LQZ07_14695 PF03880 DbpA RNA binding domain LQZ07_14695 PF00270 DEAD/DEAH box helicase LQZ07_14695 PF12343 Cold shock protein DEAD box A LQZ07_14695 PF00271 Helicase conserved C-terminal domain LQZ07_14700 PF00462 Glutaredoxin LQZ07_14705 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LQZ07_14705 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LQZ07_14715 PF11898 Domain of unknown function (DUF3418) LQZ07_14715 PF00270 DEAD/DEAH box helicase LQZ07_14715 PF00271 Helicase conserved C-terminal domain LQZ07_14715 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LQZ07_14715 PF04408 Helicase associated domain (HA2) LQZ07_14720 PF01743 Poly A polymerase head domain LQZ07_14720 PF00571 CBS domain LQZ07_14725 PF01979 Amidohydrolase family LQZ07_14730 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQZ07_14730 PF00672 HAMP domain LQZ07_14730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_14730 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_14730 PF00072 Response regulator receiver domain LQZ07_14730 PF01627 Hpt domain LQZ07_14740 PF08411 Exonuclease C-terminal LQZ07_14740 PF00929 Exonuclease LQZ07_14755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LQZ07_14755 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LQZ07_14760 PF02222 ATP-grasp domain LQZ07_14760 PF01370 NAD dependent epimerase/dehydratase family LQZ07_14770 PF04324 BFD-like [2Fe-2S] binding domain LQZ07_14775 PF01784 NIF3 (NGG1p interacting factor 3) LQZ07_14790 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LQZ07_14795 PF03846 Cell division inhibitor SulA LQZ07_14805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LQZ07_14805 PF07733 Bacterial DNA polymerase III alpha NTPase domain LQZ07_14805 PF14579 Helix-hairpin-helix motif LQZ07_14805 PF01336 OB-fold nucleic acid binding domain LQZ07_14805 PF02811 PHP domain LQZ07_14810 PF01066 CDP-alcohol phosphatidyltransferase LQZ07_14815 PF00106 short chain dehydrogenase LQZ07_14820 PF00392 Bacterial regulatory proteins, gntR family LQZ07_14820 PF07729 FCD domain LQZ07_14830 PF00474 Sodium:solute symporter family LQZ07_14850 PF00873 AcrB/AcrD/AcrF family LQZ07_14865 PF01545 Cation efflux family LQZ07_14875 PF00571 CBS domain LQZ07_14885 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LQZ07_14885 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LQZ07_14890 PF01738 Dienelactone hydrolase family LQZ07_14895 PF08787 Alginate lyase LQZ07_14905 PF13302 Acetyltransferase (GNAT) domain LQZ07_14910 PF03411 Penicillin-insensitive murein endopeptidase LQZ07_14930 PF01479 S4 domain LQZ07_14930 PF00849 RNA pseudouridylate synthase LQZ07_14940 PF00491 Arginase family LQZ07_14955 PF00365 Phosphofructokinase LQZ07_14970 PF00549 CoA-ligase LQZ07_14970 PF02629 CoA binding domain LQZ07_14975 PF00549 CoA-ligase LQZ07_14975 PF08442 ATP-grasp domain LQZ07_14980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQZ07_14980 PF00364 Biotin-requiring enzyme LQZ07_14980 PF02817 e3 binding domain LQZ07_14985 PF16078 2-oxoglutarate dehydrogenase N-terminus LQZ07_14985 PF00676 Dehydrogenase E1 component LQZ07_14985 PF16870 2-oxoglutarate dehydrogenase C-terminal LQZ07_14985 PF02779 Transketolase, pyrimidine binding domain LQZ07_14990 PF13085 2Fe-2S iron-sulfur cluster binding domain LQZ07_14995 PF02910 Fumarate reductase flavoprotein C-term LQZ07_14995 PF00890 FAD binding domain LQZ07_15000 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LQZ07_15005 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LQZ07_15010 PF00285 Citrate synthase, C-terminal domain LQZ07_15020 PF02348 Cytidylyltransferase LQZ07_15025 PF03966 Trm112p-like protein LQZ07_15030 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LQZ07_15035 PF00664 ABC transporter transmembrane region LQZ07_15035 PF00005 ABC transporter LQZ07_15040 PF00753 Metallo-beta-lactamase superfamily LQZ07_15040 PF13567 Domain of unknown function (DUF4131) LQZ07_15040 PF03772 Competence protein LQZ07_15050 PF12704 MacB-like periplasmic core domain LQZ07_15050 PF02687 FtsX-like permease family LQZ07_15055 PF00005 ABC transporter LQZ07_15060 PF02687 FtsX-like permease family LQZ07_15060 PF12704 MacB-like periplasmic core domain LQZ07_15070 PF00271 Helicase conserved C-terminal domain LQZ07_15070 PF03461 TRCF domain LQZ07_15070 PF17757 UvrB interaction domain LQZ07_15070 PF02559 CarD-like/TRCF domain LQZ07_15070 PF00270 DEAD/DEAH box helicase LQZ07_15085 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQZ07_15090 PF05728 Uncharacterised protein family (UPF0227) LQZ07_15095 PF00933 Glycosyl hydrolase family 3 N terminal domain LQZ07_15115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_15115 PF00672 HAMP domain LQZ07_15130 PF00005 ABC transporter LQZ07_15130 PF08402 TOBE domain LQZ07_15135 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_15140 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_15140 PF14785 Maltose transport system permease protein MalF P2 domain LQZ07_15145 PF01547 Bacterial extracellular solute-binding protein LQZ07_15150 PF04245 37-kD nucleoid-associated bacterial protein LQZ07_15155 PF07208 Protein of unknown function (DUF1414) LQZ07_15160 PF11893 Domain of unknown function (DUF3413) LQZ07_15160 PF00884 Sulfatase LQZ07_15180 PF03544 Gram-negative bacterial TonB protein C-terminal LQZ07_15185 PF02472 Biopolymer transport protein ExbD/TolR LQZ07_15190 PF01618 MotA/TolQ/ExbB proton channel family LQZ07_15195 PF01618 MotA/TolQ/ExbB proton channel family LQZ07_15205 PF01032 FecCD transport family LQZ07_15215 PF00005 ABC transporter LQZ07_15225 PF07715 TonB-dependent Receptor Plug Domain LQZ07_15225 PF00593 TonB dependent receptor LQZ07_15230 PF12833 Helix-turn-helix domain LQZ07_15230 PF06445 GyrI-like small molecule binding domain LQZ07_15240 PF00106 short chain dehydrogenase LQZ07_15265 PF00486 Transcriptional regulatory protein, C terminal LQZ07_15265 PF00072 Response regulator receiver domain LQZ07_15270 PF13756 Stimulus-sensing domain LQZ07_15270 PF13755 Sensor N-terminal transmembrane domain LQZ07_15270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_15270 PF00672 HAMP domain LQZ07_15270 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_15280 PF08448 PAS fold LQZ07_15280 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_15280 PF00563 EAL domain LQZ07_15290 PF01053 Cys/Met metabolism PLP-dependent enzyme LQZ07_15295 PF00180 Isocitrate/isopropylmalate dehydrogenase LQZ07_15300 PF18024 Helix-turn-helix domain LQZ07_15300 PF00158 Sigma-54 interaction domain LQZ07_15315 PF04012 PspA/IM30 family LQZ07_15320 PF02954 Bacterial regulatory protein, Fis family LQZ07_15320 PF00158 Sigma-54 interaction domain LQZ07_15325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LQZ07_15330 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_15335 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_15335 PF12911 N-terminal TM domain of oligopeptide transport permease C LQZ07_15340 PF00005 ABC transporter LQZ07_15340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LQZ07_15345 PF00005 ABC transporter LQZ07_15355 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LQZ07_15355 PF12241 Trans-2-enoyl-CoA reductase catalytic region LQZ07_15355 PF07055 Enoyl reductase FAD binding domain LQZ07_15370 PF00216 Bacterial DNA-binding protein LQZ07_15375 PF05362 Lon protease (S16) C-terminal proteolytic domain LQZ07_15375 PF02190 ATP-dependent protease La (LON) substrate-binding domain LQZ07_15375 PF00004 ATPase family associated with various cellular activities (AAA) LQZ07_15380 PF02075 Crossover junction endodeoxyribonuclease RuvC LQZ07_15385 PF01709 Transcriptional regulator LQZ07_15400 PF00563 EAL domain LQZ07_15400 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_15400 PF03707 Bacterial signalling protein N terminal repeat LQZ07_15405 PF02938 GAD domain LQZ07_15405 PF00152 tRNA synthetases class II (D, K and N) LQZ07_15405 PF01336 OB-fold nucleic acid binding domain LQZ07_15410 PF13649 Methyltransferase domain LQZ07_15415 PF01230 HIT domain LQZ07_15425 PF02417 Chromate transporter LQZ07_15430 PF00672 HAMP domain LQZ07_15430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_15430 PF02743 Cache domain LQZ07_15440 PF08003 Protein of unknown function (DUF1698) LQZ07_15445 PF18030 RimK PreATP-grasp domain LQZ07_15445 PF08443 RimK-like ATP-grasp domain LQZ07_15460 PF00156 Phosphoribosyl transferase domain LQZ07_15465 PF02674 Colicin V production protein LQZ07_15470 PF05036 Sporulation related domain LQZ07_15475 PF02875 Mur ligase family, glutamate ligase domain LQZ07_15475 PF08245 Mur ligase middle domain LQZ07_15480 PF01039 Carboxyl transferase domain LQZ07_15480 PF17848 Acetyl-coA carboxylase zinc finger domain LQZ07_15485 PF01416 tRNA pseudouridine synthase LQZ07_15495 PF01118 Semialdehyde dehydrogenase, NAD binding domain LQZ07_15495 PF02774 Semialdehyde dehydrogenase, dimerisation domain LQZ07_15500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQZ07_15500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQZ07_15500 PF11890 Domain of unknown function (DUF3410) LQZ07_15505 PF02801 Beta-ketoacyl synthase, C-terminal domain LQZ07_15505 PF00109 Beta-ketoacyl synthase, N-terminal domain LQZ07_15510 PF01266 FAD dependent oxidoreductase LQZ07_15510 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LQZ07_15520 PF00072 Response regulator receiver domain LQZ07_15520 PF01339 CheB methylesterase LQZ07_15525 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_15525 PF05230 MASE2 domain LQZ07_15540 PF04315 Elongation factor P hydroxylase LQZ07_15545 PF01264 Chorismate synthase LQZ07_15550 PF05175 Methyltransferase small domain LQZ07_15555 PF01713 Smr domain LQZ07_15560 PF06526 Protein of unknown function (DUF1107) LQZ07_15565 PF00300 Histidine phosphatase superfamily (branch 1) LQZ07_15570 PF00675 Insulinase (Peptidase family M16) LQZ07_15570 PF05193 Peptidase M16 inactive domain LQZ07_15570 PF16187 Middle or third domain of peptidase_M16 LQZ07_15580 PF00378 Enoyl-CoA hydratase/isomerase LQZ07_15580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQZ07_15580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQZ07_15585 PF02803 Thiolase, C-terminal domain LQZ07_15585 PF00108 Thiolase, N-terminal domain LQZ07_15590 PF17863 AAA lid domain LQZ07_15590 PF07726 ATPase family associated with various cellular activities (AAA) LQZ07_15595 PF01882 Protein of unknown function DUF58 LQZ07_15605 PF13519 von Willebrand factor type A domain LQZ07_15610 PF13519 von Willebrand factor type A domain LQZ07_15620 PF04175 Protein of unknown function (DUF406) LQZ07_15625 PF04542 Sigma-70 region 2 LQZ07_15625 PF08281 Sigma-70, region 4 LQZ07_15635 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LQZ07_15640 PF00376 MerR family regulatory protein LQZ07_15640 PF09278 MerR, DNA binding LQZ07_15645 PF00265 Thymidine kinase LQZ07_15650 PF03553 Na+/H+ antiporter family LQZ07_15655 PF00816 H-NS histone family LQZ07_15660 PF16363 GDP-mannose 4,6 dehydratase LQZ07_15665 PF04055 Radical SAM superfamily LQZ07_15670 PF06508 Queuosine biosynthesis protein QueC LQZ07_15680 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LQZ07_15685 PF18073 Rubredoxin metal binding domain LQZ07_15690 PF06305 Lipopolysaccharide assembly protein A domain LQZ07_15695 PF00216 Bacterial DNA-binding protein LQZ07_15700 PF00575 S1 RNA binding domain LQZ07_15705 PF02224 Cytidylate kinase LQZ07_15710 PF02954 Bacterial regulatory protein, Fis family LQZ07_15710 PF00072 Response regulator receiver domain LQZ07_15710 PF00158 Sigma-54 interaction domain LQZ07_15715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_15715 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_15715 PF13188 PAS domain LQZ07_15720 PF06490 Flagellar regulatory protein FleQ LQZ07_15720 PF02954 Bacterial regulatory protein, Fis family LQZ07_15720 PF00158 Sigma-54 interaction domain LQZ07_15725 PF02719 Polysaccharide biosynthesis protein LQZ07_15730 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LQZ07_15735 PF02348 Cytidylyltransferase LQZ07_15740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LQZ07_15760 PF00535 Glycosyl transferase family 2 LQZ07_15780 PF01553 Acyltransferase LQZ07_15780 PF00501 AMP-binding enzyme LQZ07_15805 PF03102 NeuB family LQZ07_15805 PF08666 SAF domain LQZ07_15825 PF02561 Flagellar protein FliS LQZ07_15840 PF00700 Bacterial flagellin C-terminal helical region LQZ07_15840 PF07196 Flagellin hook IN motif LQZ07_15840 PF00669 Bacterial flagellin N-terminal helical region LQZ07_15850 PF00669 Bacterial flagellin N-terminal helical region LQZ07_15850 PF00700 Bacterial flagellin C-terminal helical region LQZ07_15850 PF07196 Flagellin hook IN motif LQZ07_15860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQZ07_15860 PF00460 Flagella basal body rod protein LQZ07_15865 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LQZ07_15865 PF10135 Rod binding protein LQZ07_15870 PF02119 Flagellar P-ring protein LQZ07_15875 PF02107 Flagellar L-ring protein LQZ07_15880 PF00460 Flagella basal body rod protein LQZ07_15880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQZ07_15885 PF00460 Flagella basal body rod protein LQZ07_15885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQZ07_15890 PF07559 Flagellar basal body protein FlaE LQZ07_15890 PF00460 Flagella basal body rod protein LQZ07_15890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQZ07_15900 PF00460 Flagella basal body rod protein LQZ07_15900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQZ07_15905 PF00460 Flagella basal body rod protein LQZ07_15910 PF01739 CheR methyltransferase, SAM binding domain LQZ07_15910 PF03705 CheR methyltransferase, all-alpha domain LQZ07_15915 PF01584 CheW-like domain LQZ07_15915 PF00072 Response regulator receiver domain LQZ07_15965 PF00288 GHMP kinases N terminal domain LQZ07_15965 PF10509 Galactokinase galactose-binding signature LQZ07_15965 PF08544 GHMP kinases C terminal LQZ07_15970 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LQZ07_15970 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LQZ07_15975 PF16363 GDP-mannose 4,6 dehydratase LQZ07_15980 PF00501 AMP-binding enzyme LQZ07_15990 PF02719 Polysaccharide biosynthesis protein LQZ07_15995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LQZ07_16005 PF02397 Bacterial sugar transferase LQZ07_16010 PF00534 Glycosyl transferases group 1 LQZ07_16010 PF13477 Glycosyl transferase 4-like LQZ07_16030 PF14667 Polysaccharide biosynthesis C-terminal domain LQZ07_16030 PF01943 Polysaccharide biosynthesis protein LQZ07_16055 PF06082 Exopolysaccharide biosynthesis protein YbjH LQZ07_16060 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LQZ07_16060 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LQZ07_16060 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LQZ07_16065 PF01370 NAD dependent epimerase/dehydratase family LQZ07_16080 PF03600 Citrate transporter LQZ07_16080 PF02080 TrkA-C domain LQZ07_16085 PF00009 Elongation factor Tu GTP binding domain LQZ07_16090 PF01507 Phosphoadenosine phosphosulfate reductase family LQZ07_16125 PF00571 CBS domain LQZ07_16125 PF01380 SIS domain LQZ07_16130 PF02348 Cytidylyltransferase LQZ07_16135 PF00793 DAHP synthetase I family LQZ07_16170 PF16363 GDP-mannose 4,6 dehydratase LQZ07_16175 PF04321 RmlD substrate binding domain LQZ07_16180 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LQZ07_16185 PF00483 Nucleotidyl transferase LQZ07_16195 PF00005 ABC transporter LQZ07_16200 PF01061 ABC-2 type transporter LQZ07_16210 PF00534 Glycosyl transferases group 1 LQZ07_16215 PF00535 Glycosyl transferase family 2 LQZ07_16230 PF00953 Glycosyl transferase family 4 LQZ07_16235 PF00072 Response regulator receiver domain LQZ07_16235 PF00486 Transcriptional regulatory protein, C terminal LQZ07_16250 PF03918 Cytochrome C biogenesis protein LQZ07_16255 PF08534 Redoxin LQZ07_16260 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LQZ07_16260 PF01578 Cytochrome C assembly protein LQZ07_16265 PF03100 CcmE LQZ07_16270 PF04995 Heme exporter protein D (CcmD) LQZ07_16275 PF01578 Cytochrome C assembly protein LQZ07_16280 PF03379 CcmB protein LQZ07_16285 PF00005 ABC transporter LQZ07_16295 PF01584 CheW-like domain LQZ07_16305 PF13614 AAA domain LQZ07_16310 PF13677 Membrane MotB of proton-channel complex MotA/MotB LQZ07_16310 PF00691 OmpA family LQZ07_16315 PF01618 MotA/TolQ/ExbB proton channel family LQZ07_16320 PF01339 CheB methylesterase LQZ07_16320 PF00072 Response regulator receiver domain LQZ07_16325 PF00072 Response regulator receiver domain LQZ07_16325 PF01627 Hpt domain LQZ07_16325 PF02895 Signal transducing histidine kinase, homodimeric domain LQZ07_16325 PF01584 CheW-like domain LQZ07_16325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_16330 PF04344 Chemotaxis phosphatase, CheZ LQZ07_16335 PF00072 Response regulator receiver domain LQZ07_16340 PF04542 Sigma-70 region 2 LQZ07_16340 PF04539 Sigma-70 region 3 LQZ07_16340 PF04545 Sigma-70, region 4 LQZ07_16345 PF10609 NUBPL iron-transfer P-loop NTPase LQZ07_16350 PF00448 SRP54-type protein, GTPase domain LQZ07_16355 PF00771 FHIPEP family LQZ07_16360 PF01312 FlhB HrpN YscU SpaS Family LQZ07_16365 PF01311 Bacterial export proteins, family 1 LQZ07_16370 PF01313 Bacterial export proteins, family 3 LQZ07_16375 PF00813 FliP family LQZ07_16380 PF04347 Flagellar biosynthesis protein, FliO LQZ07_16385 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LQZ07_16390 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LQZ07_16390 PF02154 Flagellar motor switch protein FliM LQZ07_16410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQZ07_16410 PF18269 T3SS EscN ATPase C-terminal domain LQZ07_16420 PF01706 FliG C-terminal domain LQZ07_16420 PF14842 FliG N-terminal domain LQZ07_16420 PF14841 FliG middle domain LQZ07_16425 PF08345 Flagellar M-ring protein C-terminal LQZ07_16425 PF01514 Secretory protein of YscJ/FliF family LQZ07_16430 PF02049 Flagellar hook-basal body complex protein FliE LQZ07_16435 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_16435 PF00360 Phytochrome region LQZ07_16435 PF00563 EAL domain LQZ07_16435 PF01590 GAF domain LQZ07_16440 PF08668 HDOD domain LQZ07_16440 PF00563 EAL domain LQZ07_16445 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LQZ07_16450 PF00155 Aminotransferase class I and II LQZ07_16455 PF00266 Aminotransferase class-V LQZ07_16460 PF03989 DNA gyrase C-terminal domain, beta-propeller LQZ07_16460 PF00521 DNA gyrase/topoisomerase IV, subunit A LQZ07_16470 PF13419 Haloacid dehalogenase-like hydrolase LQZ07_16475 PF03477 ATP cone domain LQZ07_16475 PF00317 Ribonucleotide reductase, all-alpha domain LQZ07_16475 PF02867 Ribonucleotide reductase, barrel domain LQZ07_16480 PF00268 Ribonucleotide reductase, small chain LQZ07_16485 PF00111 2Fe-2S iron-sulfur cluster binding domain LQZ07_16500 PF03466 LysR substrate binding domain LQZ07_16500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_16505 PF00155 Aminotransferase class I and II LQZ07_16510 PF13286 Phosphohydrolase-associated domain LQZ07_16510 PF01966 HD domain LQZ07_16515 PF00571 CBS domain LQZ07_16530 PF00463 Isocitrate lyase family LQZ07_16535 PF01895 PhoU domain LQZ07_16540 PF00005 ABC transporter LQZ07_16545 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_16550 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_16560 PF02503 Polyphosphate kinase middle domain LQZ07_16560 PF13089 Polyphosphate kinase N-terminal domain LQZ07_16560 PF17941 Polyphosphate kinase C-terminal domain 1 LQZ07_16560 PF13090 Polyphosphate kinase C-terminal domain 2 LQZ07_16565 PF01966 HD domain LQZ07_16575 PF13443 Cro/C1-type HTH DNA-binding domain LQZ07_16595 PF16875 Glycosyl hydrolase family 36 N-terminal domain LQZ07_16595 PF16874 Glycosyl hydrolase family 36 C-terminal domain LQZ07_16600 PF02929 Beta galactosidase small chain LQZ07_16600 PF16353 Domain of unknown function(DUF4981) LQZ07_16600 PF00703 Glycosyl hydrolases family 2 LQZ07_16600 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LQZ07_16600 PF02837 Glycosyl hydrolases family 2, sugar binding domain LQZ07_16615 PF04261 Dyp-type peroxidase family LQZ07_16625 PF12849 PBP superfamily domain LQZ07_16630 PF08787 Alginate lyase LQZ07_16635 PF01464 Transglycosylase SLT domain LQZ07_16635 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQZ07_16640 PF11808 Phosphate regulon sensor protein PhoR LQZ07_16640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_16640 PF00989 PAS fold LQZ07_16640 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_16645 PF00072 Response regulator receiver domain LQZ07_16645 PF00486 Transcriptional regulatory protein, C terminal LQZ07_16675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_16675 PF08447 PAS fold LQZ07_16675 PF13426 PAS domain LQZ07_16685 PF00128 Alpha amylase, catalytic domain LQZ07_16690 PF00483 Nucleotidyl transferase LQZ07_16700 PF04542 Sigma-70 region 2 LQZ07_16700 PF08281 Sigma-70, region 4 LQZ07_16710 PF03773 Predicted permease LQZ07_16720 PF01638 HxlR-like helix-turn-helix LQZ07_16735 PF04381 Putative exonuclease, RdgC LQZ07_16740 PF01136 Peptidase family U32 LQZ07_16740 PF16325 Peptidase family U32 C-terminal domain LQZ07_16745 PF12838 4Fe-4S dicluster domain LQZ07_16770 PF00583 Acetyltransferase (GNAT) family LQZ07_16775 PF00141 Peroxidase LQZ07_16780 PF04172 LrgB-like family LQZ07_16785 PF03788 LrgA family LQZ07_16790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQZ07_16790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQZ07_16815 PF02872 5'-nucleotidase, C-terminal domain LQZ07_16815 PF00149 Calcineurin-like phosphoesterase LQZ07_16820 PF04055 Radical SAM superfamily LQZ07_16850 PF13439 Glycosyltransferase Family 4 LQZ07_16850 PF00534 Glycosyl transferases group 1 LQZ07_16870 PF02706 Chain length determinant protein LQZ07_16870 PF13807 G-rich domain on putative tyrosine kinase LQZ07_16870 PF13614 AAA domain LQZ07_16880 PF02397 Bacterial sugar transferase LQZ07_16895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQZ07_16895 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LQZ07_16905 PF16868 NMT1-like family LQZ07_16915 PF03734 L,D-transpeptidase catalytic domain LQZ07_16925 PF02743 Cache domain LQZ07_16925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_16925 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_16935 PF02036 SCP-2 sterol transfer family LQZ07_16940 PF01136 Peptidase family U32 LQZ07_16945 PF01136 Peptidase family U32 LQZ07_16950 PF13181 Tetratricopeptide repeat LQZ07_16950 PF07719 Tetratricopeptide repeat LQZ07_16955 PF00793 DAHP synthetase I family LQZ07_16960 PF13369 Transglutaminase-like superfamily LQZ07_16965 PF17827 PrmC N-terminal domain LQZ07_16965 PF13847 Methyltransferase domain LQZ07_16970 PF03462 PCRF domain LQZ07_16970 PF00472 RF-1 domain LQZ07_16975 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LQZ07_16975 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LQZ07_16975 PF01488 Shikimate / quinate 5-dehydrogenase LQZ07_16980 PF03550 Outer membrane lipoprotein LolB LQZ07_16985 PF08544 GHMP kinases C terminal LQZ07_16985 PF00288 GHMP kinases N terminal domain LQZ07_16990 PF14572 Phosphoribosyl synthetase-associated domain LQZ07_16990 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LQZ07_16995 PF14693 Ribosomal protein TL5, C-terminal domain LQZ07_16995 PF01386 Ribosomal L25p family LQZ07_17000 PF01195 Peptidyl-tRNA hydrolase LQZ07_17005 PF06071 Protein of unknown function (DUF933) LQZ07_17005 PF01926 50S ribosome-binding GTPase LQZ07_17050 PF01494 FAD binding domain LQZ07_17055 PF00919 Uncharacterized protein family UPF0004 LQZ07_17055 PF01938 TRAM domain LQZ07_17055 PF04055 Radical SAM superfamily LQZ07_17060 PF02562 PhoH-like protein LQZ07_17065 PF02130 Uncharacterized protein family UPF0054 LQZ07_17070 PF00571 CBS domain LQZ07_17070 PF03471 Transporter associated domain LQZ07_17075 PF00795 Carbon-nitrogen hydrolase LQZ07_17080 PF07295 Zinc-ribbon containing domain LQZ07_17085 PF13603 Leucyl-tRNA synthetase, Domain 2 LQZ07_17085 PF00133 tRNA synthetases class I (I, L, M and V) LQZ07_17085 PF08264 Anticodon-binding domain of tRNA LQZ07_17090 PF04390 Lipopolysaccharide-assembly LQZ07_17095 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LQZ07_17095 PF06144 DNA polymerase III, delta subunit LQZ07_17100 PF01467 Cytidylyltransferase-like LQZ07_17110 PF02590 Predicted SPOUT methyltransferase LQZ07_17115 PF00905 Penicillin binding protein transpeptidase domain LQZ07_17115 PF03717 Penicillin-binding Protein dimerisation domain LQZ07_17120 PF01098 Cell cycle protein LQZ07_17125 PF13406 Transglycosylase SLT domain LQZ07_17130 PF05036 Sporulation related domain LQZ07_17130 PF03330 Lytic transglycolase LQZ07_17135 PF00768 D-alanyl-D-alanine carboxypeptidase LQZ07_17135 PF07943 Penicillin-binding protein 5, C-terminal domain LQZ07_17140 PF04359 Protein of unknown function (DUF493) LQZ07_17145 PF03099 Biotin/lipoate A/B protein ligase family LQZ07_17150 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LQZ07_17150 PF04055 Radical SAM superfamily LQZ07_17155 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LQZ07_17175 PF00753 Metallo-beta-lactamase superfamily LQZ07_17175 PF14863 Alkyl sulfatase dimerisation LQZ07_17175 PF14864 Alkyl sulfatase C-terminal LQZ07_17180 PF03466 LysR substrate binding domain LQZ07_17180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_17200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_17200 PF00672 HAMP domain LQZ07_17200 PF17200 Single Cache domain 2 LQZ07_17215 PF01270 Glycosyl hydrolases family 8 LQZ07_17225 PF00171 Aldehyde dehydrogenase family LQZ07_17230 PF00106 short chain dehydrogenase LQZ07_17235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_17235 PF03466 LysR substrate binding domain LQZ07_17255 PF00171 Aldehyde dehydrogenase family LQZ07_17260 PF01472 PUA domain LQZ07_17260 PF00696 Amino acid kinase family LQZ07_17270 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LQZ07_17275 PF00860 Permease family LQZ07_17280 PF01546 Peptidase family M20/M25/M40 LQZ07_17280 PF07687 Peptidase dimerisation domain LQZ07_17290 PF11799 impB/mucB/samB family C-terminal domain LQZ07_17290 PF00817 impB/mucB/samB family LQZ07_17290 PF11798 IMS family HHH motif LQZ07_17305 PF00111 2Fe-2S iron-sulfur cluster binding domain LQZ07_17305 PF00111 2Fe-2S iron-sulfur cluster binding domain LQZ07_17305 PF03473 MOSC domain LQZ07_17305 PF03476 MOSC N-terminal beta barrel domain LQZ07_17305 PF03473 MOSC domain LQZ07_17305 PF03476 MOSC N-terminal beta barrel domain LQZ07_17310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQZ07_17315 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_17315 PF00563 EAL domain LQZ07_17315 PF13426 PAS domain LQZ07_17320 PF01794 Ferric reductase like transmembrane component LQZ07_17325 PF00174 Oxidoreductase molybdopterin binding domain LQZ07_17330 PF02464 Competence-damaged protein LQZ07_17330 PF00994 Probable molybdopterin binding domain LQZ07_17335 PF01212 Beta-eliminating lyase LQZ07_17340 PF01370 NAD dependent epimerase/dehydratase family LQZ07_17345 PF00356 Bacterial regulatory proteins, lacI family LQZ07_17350 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LQZ07_17350 PF01243 Pyridoxamine 5'-phosphate oxidase LQZ07_17355 PF14718 Soluble lytic murein transglycosylase L domain LQZ07_17355 PF01464 Transglycosylase SLT domain LQZ07_17360 PF00005 ABC transporter LQZ07_17360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LQZ07_17365 PF12911 N-terminal TM domain of oligopeptide transport permease C LQZ07_17365 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_17370 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_17375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LQZ07_17380 PF00563 EAL domain LQZ07_17380 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_17380 PF03707 Bacterial signalling protein N terminal repeat LQZ07_17385 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LQZ07_17390 PF00800 Prephenate dehydratase LQZ07_17390 PF01817 Chorismate mutase type II LQZ07_17400 PF02978 Signal peptide binding domain LQZ07_17400 PF02881 SRP54-type protein, helical bundle domain LQZ07_17400 PF00448 SRP54-type protein, GTPase domain LQZ07_17405 PF01578 Cytochrome C assembly protein LQZ07_17410 PF01595 Cyclin M transmembrane N-terminal domain LQZ07_17410 PF00571 CBS domain LQZ07_17410 PF03471 Transporter associated domain LQZ07_17415 PF02664 S-Ribosylhomocysteinase (LuxS) LQZ07_17425 PF04262 Glutamate-cysteine ligase LQZ07_17430 PF05193 Peptidase M16 inactive domain LQZ07_17430 PF00675 Insulinase (Peptidase family M16) LQZ07_17440 PF13419 Haloacid dehalogenase-like hydrolase LQZ07_17445 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LQZ07_17450 PF00364 Biotin-requiring enzyme LQZ07_17450 PF02436 Conserved carboxylase domain LQZ07_17450 PF00682 HMGL-like LQZ07_17500 PF02599 Global regulator protein family LQZ07_17505 PF13840 ACT domain LQZ07_17505 PF01842 ACT domain LQZ07_17505 PF00696 Amino acid kinase family LQZ07_17510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LQZ07_17510 PF01411 tRNA synthetases class II (A) LQZ07_17510 PF02272 DHHA1 domain LQZ07_17520 PF00154 recA bacterial DNA recombination protein LQZ07_17525 PF01624 MutS domain I LQZ07_17525 PF00488 MutS domain V LQZ07_17525 PF05190 MutS family domain IV LQZ07_17525 PF05192 MutS domain III LQZ07_17525 PF05188 MutS domain II LQZ07_17530 PF04539 Sigma-70 region 3 LQZ07_17530 PF04542 Sigma-70 region 2 LQZ07_17530 PF00140 Sigma-70 factor, region 1.2 LQZ07_17530 PF04545 Sigma-70, region 4 LQZ07_17535 PF01551 Peptidase family M23 LQZ07_17535 PF01476 LysM domain LQZ07_17540 PF09335 SNARE associated Golgi protein LQZ07_17550 PF01975 Survival protein SurE LQZ07_17555 PF01142 tRNA pseudouridine synthase D (TruD) LQZ07_17560 PF02542 YgbB family LQZ07_17565 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LQZ07_17570 PF04977 Septum formation initiator LQZ07_17575 PF00113 Enolase, C-terminal TIM barrel domain LQZ07_17575 PF03952 Enolase, N-terminal domain LQZ07_17580 PF06418 CTP synthase N-terminus LQZ07_17580 PF00117 Glutamine amidotransferase class-I LQZ07_17585 PF03819 MazG nucleotide pyrophosphohydrolase domain LQZ07_17590 PF04607 Region found in RelA / SpoT proteins LQZ07_17590 PF13291 ACT domain LQZ07_17590 PF02824 TGS domain LQZ07_17595 PF01938 TRAM domain LQZ07_17595 PF05958 tRNA (Uracil-5-)-methyltransferase LQZ07_17600 PF01627 Hpt domain LQZ07_17600 PF00072 Response regulator receiver domain LQZ07_17600 PF00672 HAMP domain LQZ07_17600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_17600 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_17600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQZ07_17610 PF01648 4'-phosphopantetheinyl transferase superfamily LQZ07_17615 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LQZ07_17620 PF02565 Recombination protein O C terminal LQZ07_17620 PF11967 Recombination protein O N terminal LQZ07_17625 PF07650 KH domain LQZ07_17625 PF01926 50S ribosome-binding GTPase LQZ07_17630 PF00035 Double-stranded RNA binding motif LQZ07_17630 PF14622 Ribonuclease-III-like LQZ07_17635 PF10502 Signal peptidase, peptidase S26 LQZ07_17640 PF00009 Elongation factor Tu GTP binding domain LQZ07_17640 PF03144 Elongation factor Tu domain 2 LQZ07_17640 PF06421 GTP-binding protein LepA C-terminus LQZ07_17640 PF00679 Elongation factor G C-terminus LQZ07_17650 PF03888 MucB/RseB N-terminal domain LQZ07_17650 PF17188 MucB/RseB C-terminal domain LQZ07_17660 PF04542 Sigma-70 region 2 LQZ07_17660 PF08281 Sigma-70, region 4 LQZ07_17665 PF02910 Fumarate reductase flavoprotein C-term LQZ07_17665 PF00890 FAD binding domain LQZ07_17670 PF03937 Flavinator of succinate dehydrogenase LQZ07_17675 PF01571 Aminomethyltransferase folate-binding domain LQZ07_17685 PF00005 ABC transporter LQZ07_17690 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_17695 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_17700 PF12849 PBP superfamily domain LQZ07_17705 PF05951 Bacterial protein of unknown function (DUF882) LQZ07_17710 PF01471 Putative peptidoglycan binding domain LQZ07_17710 PF03734 L,D-transpeptidase catalytic domain LQZ07_17735 PF10502 Signal peptidase, peptidase S26 LQZ07_17740 PF03358 NADPH-dependent FMN reductase LQZ07_17750 PF00672 HAMP domain LQZ07_17750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_17760 PF00942 Cellulose binding domain LQZ07_17760 PF02011 Glycosyl hydrolase family 48 LQZ07_17760 PF00759 Glycosyl hydrolase family 9 LQZ07_17765 PF00942 Cellulose binding domain LQZ07_17765 PF02011 Glycosyl hydrolase family 48 LQZ07_17765 PF00759 Glycosyl hydrolase family 9 LQZ07_17775 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LQZ07_17775 PF00056 lactate/malate dehydrogenase, NAD binding domain LQZ07_17795 PF00578 AhpC/TSA family LQZ07_17800 PF11412 Disulphide bond corrector protein DsbC LQZ07_17800 PF02683 Cytochrome C biogenesis protein transmembrane region LQZ07_17810 PF02311 AraC-like ligand binding domain LQZ07_17810 PF12833 Helix-turn-helix domain LQZ07_17815 PF00672 HAMP domain LQZ07_17815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_17815 PF02743 Cache domain LQZ07_17820 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LQZ07_17820 PF03625 Domain of unknown function DUF302 LQZ07_17845 PF12034 Domain of unknown function (DUF3520) LQZ07_17845 PF00092 von Willebrand factor type A domain LQZ07_17845 PF12450 von Willebrand factor LQZ07_17855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_17855 PF08447 PAS fold LQZ07_17860 PF01063 Amino-transferase class IV LQZ07_17880 PF02798 Glutathione S-transferase, N-terminal domain LQZ07_17885 PF17754 MftR C-terminal domain LQZ07_17885 PF00440 Bacterial regulatory proteins, tetR family LQZ07_17890 PF07995 Glucose / Sorbosone dehydrogenase LQZ07_17905 PF00550 Phosphopantetheine attachment site LQZ07_17905 PF14765 Polyketide synthase dehydratase LQZ07_17905 PF08659 KR domain LQZ07_17905 PF00109 Beta-ketoacyl synthase, N-terminal domain LQZ07_17905 PF00698 Acyl transferase domain LQZ07_17905 PF16197 Ketoacyl-synthetase C-terminal extension LQZ07_17905 PF09277 Erythronolide synthase, docking LQZ07_17905 PF08240 Alcohol dehydrogenase GroES-like domain LQZ07_17905 PF02801 Beta-ketoacyl synthase, C-terminal domain LQZ07_17905 PF08990 Erythronolide synthase docking LQZ07_17930 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_17935 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_17940 PF00005 ABC transporter LQZ07_17940 PF17912 MalK OB fold domain LQZ07_17945 PF12706 Beta-lactamase superfamily domain LQZ07_17945 PF00753 Metallo-beta-lactamase superfamily LQZ07_17950 PF00459 Inositol monophosphatase family LQZ07_17955 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LQZ07_17955 PF00356 Bacterial regulatory proteins, lacI family LQZ07_17970 PF00672 HAMP domain LQZ07_17970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_17985 PF12833 Helix-turn-helix domain LQZ07_17985 PF12852 Cupin LQZ07_17990 PF03150 Di-haem cytochrome c peroxidase LQZ07_18005 PF00005 ABC transporter LQZ07_18005 PF00664 ABC transporter transmembrane region LQZ07_18030 PF02589 LUD domain LQZ07_18035 PF11870 Domain of unknown function (DUF3390) LQZ07_18035 PF13183 4Fe-4S dicluster domain LQZ07_18035 PF02589 LUD domain LQZ07_18040 PF02754 Cysteine-rich domain LQZ07_18045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_18045 PF03466 LysR substrate binding domain LQZ07_18060 PF13607 Succinyl-CoA ligase like flavodoxin domain LQZ07_18060 PF13380 CoA binding domain LQZ07_18060 PF00583 Acetyltransferase (GNAT) family LQZ07_18075 PF02926 THUMP domain LQZ07_18075 PF02568 Thiamine biosynthesis protein (ThiI) LQZ07_18080 PF13677 Membrane MotB of proton-channel complex MotA/MotB LQZ07_18080 PF00691 OmpA family LQZ07_18085 PF01618 MotA/TolQ/ExbB proton channel family LQZ07_18090 PF02609 Exonuclease VII small subunit LQZ07_18095 PF00348 Polyprenyl synthetase LQZ07_18100 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LQZ07_18100 PF02779 Transketolase, pyrimidine binding domain LQZ07_18100 PF02780 Transketolase, C-terminal domain LQZ07_18105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LQZ07_18110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LQZ07_18110 PF00005 ABC transporter LQZ07_18115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LQZ07_18115 PF00005 ABC transporter LQZ07_18120 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_18120 PF12911 N-terminal TM domain of oligopeptide transport permease C LQZ07_18125 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_18130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LQZ07_18135 PF04608 Phosphatidylglycerophosphatase A LQZ07_18140 PF02769 AIR synthase related protein, C-terminal domain LQZ07_18140 PF00586 AIR synthase related protein, N-terminal domain LQZ07_18145 PF01029 NusB family LQZ07_18150 PF00885 6,7-dimethyl-8-ribityllumazine synthase LQZ07_18155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LQZ07_18155 PF00925 GTP cyclohydrolase II LQZ07_18160 PF00677 Lumazine binding domain LQZ07_18165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LQZ07_18165 PF01872 RibD C-terminal domain LQZ07_18170 PF03477 ATP cone domain LQZ07_18175 PF01965 DJ-1/PfpI family LQZ07_18185 PF00464 Serine hydroxymethyltransferase LQZ07_18200 PF01476 LysM domain LQZ07_18200 PF17969 L,D-transpeptidase C-terminal domain LQZ07_18200 PF03734 L,D-transpeptidase catalytic domain LQZ07_18205 PF00005 ABC transporter LQZ07_18205 PF12848 ABC transporter LQZ07_18220 PF00970 Oxidoreductase FAD-binding domain LQZ07_18220 PF00175 Oxidoreductase NAD-binding domain LQZ07_18225 PF08212 Lipocalin-like domain LQZ07_18230 PF01925 Sulfite exporter TauE/SafE LQZ07_18235 PF01266 FAD dependent oxidoreductase LQZ07_18240 PF08534 Redoxin LQZ07_18260 PF08281 Sigma-70, region 4 LQZ07_18260 PF04542 Sigma-70 region 2 LQZ07_18270 PF00155 Aminotransferase class I and II LQZ07_18280 PF17783 CvfB-like winged helix domain LQZ07_18280 PF13509 S1 domain LQZ07_18285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_18295 PF00155 Aminotransferase class I and II LQZ07_18310 PF00765 Autoinducer synthase LQZ07_18320 PF03472 Autoinducer binding domain LQZ07_18320 PF00196 Bacterial regulatory proteins, luxR family LQZ07_18325 PF03458 UPF0126 domain LQZ07_18330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQZ07_18330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQZ07_18335 PF00266 Aminotransferase class-V LQZ07_18340 PF00293 NUDIX domain LQZ07_18350 PF03264 NapC/NirT cytochrome c family, N-terminal region LQZ07_18365 PF00483 Nucleotidyl transferase LQZ07_18370 PF00563 EAL domain LQZ07_18370 PF05231 MASE1 LQZ07_18375 PF04324 BFD-like [2Fe-2S] binding domain LQZ07_18375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LQZ07_18375 PF00384 Molybdopterin oxidoreductase LQZ07_18375 PF01568 Molydopterin dinucleotide binding domain LQZ07_18390 PF00075 RNase H LQZ07_18395 PF03466 LysR substrate binding domain LQZ07_18395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_18400 PF00106 short chain dehydrogenase LQZ07_18410 PF01022 Bacterial regulatory protein, arsR family LQZ07_18420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LQZ07_18420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LQZ07_18445 PF00563 EAL domain LQZ07_18445 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_18445 PF03707 Bacterial signalling protein N terminal repeat LQZ07_18460 PF07690 Major Facilitator Superfamily LQZ07_18465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_18465 PF03466 LysR substrate binding domain LQZ07_18475 PF00520 Ion transport protein LQZ07_18475 PF00027 Cyclic nucleotide-binding domain LQZ07_18490 PF13302 Acetyltransferase (GNAT) domain LQZ07_18500 PF00860 Permease family LQZ07_18525 PF01810 LysE type translocator LQZ07_18530 PF00155 Aminotransferase class I and II LQZ07_18530 PF00392 Bacterial regulatory proteins, gntR family LQZ07_18535 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LQZ07_18540 PF01427 D-ala-D-ala dipeptidase LQZ07_18555 PF05368 NmrA-like family LQZ07_18570 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_18575 PF00005 ABC transporter LQZ07_18600 PF00701 Dihydrodipicolinate synthetase family LQZ07_18605 PF05175 Methyltransferase small domain LQZ07_18605 PF08468 Methyltransferase small domain N-terminal LQZ07_18610 PF00483 Nucleotidyl transferase LQZ07_18615 PF08323 Starch synthase catalytic domain LQZ07_18615 PF00534 Glycosyl transferases group 1 LQZ07_18630 PF00892 EamA-like transporter family LQZ07_18660 PF01274 Malate synthase LQZ07_18670 PF01329 Pterin 4 alpha carbinolamine dehydratase LQZ07_18685 PF03167 Uracil DNA glycosylase superfamily LQZ07_18690 PF00248 Aldo/keto reductase family LQZ07_18705 PF00210 Ferritin-like domain LQZ07_18710 PF00210 Ferritin-like domain LQZ07_18715 PF00912 Transglycosylase LQZ07_18720 PF03594 Benzoate membrane transport protein LQZ07_18725 PF07883 Cupin domain LQZ07_18725 PF01381 Helix-turn-helix LQZ07_18735 PF01475 Ferric uptake regulator family LQZ07_18740 PF01476 LysM domain LQZ07_18740 PF08525 Opacity-associated protein A N-terminal motif LQZ07_18740 PF01551 Peptidase family M23 LQZ07_18750 PF00857 Isochorismatase family LQZ07_18755 PF00920 Dehydratase family LQZ07_18760 PF01202 Shikimate kinase LQZ07_18765 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LQZ07_18765 PF06165 Glycosyltransferase family 36 LQZ07_18770 PF00356 Bacterial regulatory proteins, lacI family LQZ07_18780 PF10672 S-adenosylmethionine-dependent methyltransferase LQZ07_18780 PF17785 PUA-like domain LQZ07_18795 PF00571 CBS domain LQZ07_18810 PF03372 Endonuclease/Exonuclease/phosphatase family LQZ07_18815 PF02028 BCCT, betaine/carnitine/choline family transporter LQZ07_18830 PF03605 Anaerobic c4-dicarboxylate membrane transporter LQZ07_18840 PF03423 Carbohydrate binding domain (family 25) LQZ07_18840 PF01373 Glycosyl hydrolase family 14 LQZ07_18875 PF02743 Cache domain LQZ07_18875 PF00672 HAMP domain LQZ07_18875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_18880 PF03466 LysR substrate binding domain LQZ07_18880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_18890 PF00873 AcrB/AcrD/AcrF family LQZ07_18900 PF01906 Putative heavy-metal-binding LQZ07_18920 PF01243 Pyridoxamine 5'-phosphate oxidase LQZ07_18925 PF06228 Haem utilisation ChuX/HutX LQZ07_18930 PF03544 Gram-negative bacterial TonB protein C-terminal LQZ07_18935 PF01618 MotA/TolQ/ExbB proton channel family LQZ07_18940 PF02472 Biopolymer transport protein ExbD/TolR LQZ07_18950 PF01032 FecCD transport family LQZ07_18955 PF00005 ABC transporter LQZ07_18960 PF12833 Helix-turn-helix domain LQZ07_18960 PF06445 GyrI-like small molecule binding domain LQZ07_18970 PF00561 alpha/beta hydrolase fold LQZ07_18970 PF08386 TAP-like protein LQZ07_18985 PF00925 GTP cyclohydrolase II LQZ07_18995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_18995 PF12729 Four helix bundle sensory module for signal transduction LQZ07_18995 PF00672 HAMP domain LQZ07_19015 PF09375 Imelysin LQZ07_19025 PF01042 Endoribonuclease L-PSP LQZ07_19135 PF13693 Winged helix-turn-helix DNA-binding LQZ07_19140 PF02914 Bacteriophage Mu transposase LQZ07_19140 PF02316 Mu DNA-binding domain LQZ07_19140 PF09039 Mu DNA binding, I gamma subdomain LQZ07_19140 PF09299 Mu transposase, C-terminal LQZ07_19160 PF10124 Mu-like prophage major head subunit gpT LQZ07_19245 PF10668 Phage terminase small subunit LQZ07_19245 PF03592 Terminase small subunit LQZ07_19320 PF03796 DnaB-like helicase C terminal domain LQZ07_19320 PF00772 DnaB-like helicase N terminal domain LQZ07_19380 PF10065 Uncharacterized conserved protein (DUF2303) LQZ07_19405 PF02498 BRO family, N-terminal domain LQZ07_19405 PF10548 P22AR C-terminal domain LQZ07_19425 PF00672 HAMP domain LQZ07_19425 PF02743 Cache domain LQZ07_19425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_19445 PF01933 Uncharacterised protein family UPF0052 LQZ07_19460 PF01037 Lrp/AsnC ligand binding domain LQZ07_19470 PF00589 Phage integrase family LQZ07_19470 PF13356 Arm DNA-binding domain LQZ07_19520 PF00155 Aminotransferase class I and II LQZ07_19525 PF00155 Aminotransferase class I and II LQZ07_19540 PF13693 Winged helix-turn-helix DNA-binding LQZ07_19550 PF01527 Transposase LQZ07_19555 PF13333 Integrase core domain LQZ07_19555 PF00665 Integrase core domain LQZ07_19555 PF13276 HTH-like domain LQZ07_19560 PF00392 Bacterial regulatory proteins, gntR family LQZ07_19560 PF07702 UTRA domain LQZ07_19565 PF00367 phosphotransferase system, EIIB LQZ07_19565 PF02378 Phosphotransferase system, EIIC LQZ07_19570 PF02056 Family 4 glycosyl hydrolase LQZ07_19570 PF11975 Family 4 glycosyl hydrolase C-terminal domain LQZ07_19575 PF02595 Glycerate kinase family LQZ07_19720 PF13638 PIN domain LQZ07_19720 PF02562 PhoH-like protein LQZ07_19750 PF01066 CDP-alcohol phosphatidyltransferase LQZ07_19760 PF10431 C-terminal, D2-small domain, of ClpB protein LQZ07_19760 PF02861 Clp amino terminal domain, pathogenicity island component LQZ07_19760 PF07724 AAA domain (Cdc48 subfamily) LQZ07_19760 PF00004 ATPase family associated with various cellular activities (AAA) LQZ07_19760 PF17871 AAA lid domain LQZ07_19765 PF02578 Multi-copper polyphenol oxidoreductase laccase LQZ07_19770 PF01479 S4 domain LQZ07_19770 PF00849 RNA pseudouridylate synthase LQZ07_19775 PF13525 Outer membrane lipoprotein LQZ07_19780 PF00543 Nitrogen regulatory protein P-II LQZ07_19820 PF02401 LytB protein LQZ07_19825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQZ07_19830 PF01252 Signal peptidase (SPase) II LQZ07_19835 PF08264 Anticodon-binding domain of tRNA LQZ07_19835 PF00133 tRNA synthetases class I (I, L, M and V) LQZ07_19835 PF06827 Zinc finger found in FPG and IleRS LQZ07_19840 PF06574 FAD synthetase LQZ07_19840 PF01687 Riboflavin kinase LQZ07_19845 PF03023 Lipid II flippase MurJ LQZ07_19850 PF01649 Ribosomal protein S20 LQZ07_19855 PF01022 Bacterial regulatory protein, arsR family LQZ07_19860 PF03065 Glycosyl hydrolase family 57 LQZ07_19860 PF00041 Fibronectin type III domain LQZ07_19860 PF03423 Carbohydrate binding domain (family 25) LQZ07_19865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_19865 PF03466 LysR substrate binding domain LQZ07_19870 PF06965 Na+/H+ antiporter 1 LQZ07_19875 PF00303 Thymidylate synthase LQZ07_19880 PF01790 Prolipoprotein diacylglyceryl transferase LQZ07_19885 PF01590 GAF domain LQZ07_19885 PF05524 PEP-utilising enzyme, N-terminal LQZ07_19885 PF00391 PEP-utilising enzyme, mobile domain LQZ07_19885 PF02896 PEP-utilising enzyme, TIM barrel domain LQZ07_19890 PF00293 NUDIX domain LQZ07_19895 PF02976 DNA mismatch repair enzyme MutH LQZ07_19905 PF01245 Ribosomal protein L19 LQZ07_19910 PF01746 tRNA (Guanine-1)-methyltransferase LQZ07_19915 PF01782 RimM N-terminal domain LQZ07_19915 PF05239 PRC-barrel domain LQZ07_19920 PF00886 Ribosomal protein S16 LQZ07_19925 PF13419 Haloacid dehalogenase-like hydrolase LQZ07_19930 PF03889 Alternative ribosome-rescue factor A LQZ07_19940 PF03069 Acetamidase/Formamidase family LQZ07_19945 PF00005 ABC transporter LQZ07_19950 PF00005 ABC transporter LQZ07_19950 PF12399 Branched-chain amino acid ATP-binding cassette transporter LQZ07_19960 PF11862 Domain of unknown function (DUF3382) LQZ07_19960 PF02653 Branched-chain amino acid transport system / permease component LQZ07_19965 PF13458 Periplasmic binding protein LQZ07_19970 PF00072 Response regulator receiver domain LQZ07_19970 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_19970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_19970 PF09308 LuxQ, periplasmic LQZ07_19975 PF00072 Response regulator receiver domain LQZ07_19975 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_20040 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_20045 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_20050 PF17912 MalK OB fold domain LQZ07_20050 PF00005 ABC transporter LQZ07_20055 PF00005 ABC transporter LQZ07_20055 PF17912 MalK OB fold domain LQZ07_20060 PF02954 Bacterial regulatory protein, Fis family LQZ07_20060 PF01590 GAF domain LQZ07_20060 PF00158 Sigma-54 interaction domain LQZ07_20075 PF03928 Haem-degrading LQZ07_20095 PF08447 PAS fold LQZ07_20095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_20100 PF00085 Thioredoxin LQZ07_20105 PF01368 DHH family LQZ07_20105 PF02272 DHHA1 domain LQZ07_20105 PF17768 RecJ OB domain LQZ07_20110 PF13098 Thioredoxin-like domain LQZ07_20110 PF10411 Disulfide bond isomerase protein N-terminus LQZ07_20115 PF02899 Phage integrase, N-terminal SAM-like domain LQZ07_20115 PF00589 Phage integrase family LQZ07_20120 PF00258 Flavodoxin LQZ07_20125 PF12729 Four helix bundle sensory module for signal transduction LQZ07_20125 PF00672 HAMP domain LQZ07_20125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_20130 PF05525 Branched-chain amino acid transport protein LQZ07_20135 PF05175 Methyltransferase small domain LQZ07_20140 PF00270 DEAD/DEAH box helicase LQZ07_20140 PF00271 Helicase conserved C-terminal domain LQZ07_20145 PF05736 OprF membrane domain LQZ07_20145 PF00691 OmpA family LQZ07_20155 PF03883 Peroxide stress protein YaaA LQZ07_20160 PF00437 Type II/IV secretion system protein LQZ07_20165 PF00437 Type II/IV secretion system protein LQZ07_20170 PF01168 Alanine racemase, N-terminal domain LQZ07_20175 PF03807 NADP oxidoreductase coenzyme F420-dependent LQZ07_20175 PF14748 Pyrroline-5-carboxylate reductase dimerisation LQZ07_20180 PF02325 YGGT family LQZ07_20185 PF02594 Uncharacterised ACR, YggU family COG1872 LQZ07_20195 PF01725 Ham1 family LQZ07_20200 PF06969 HemN C-terminal domain LQZ07_20200 PF04055 Radical SAM superfamily LQZ07_20205 PF02390 Putative methyltransferase LQZ07_20210 PF06906 Protein of unknown function (DUF1272) LQZ07_20215 PF07963 Prokaryotic N-terminal methylation motif LQZ07_20230 PF01037 Lrp/AsnC ligand binding domain LQZ07_20235 PF14815 NUDIX domain LQZ07_20235 PF00730 HhH-GPD superfamily base excision DNA repair protein LQZ07_20235 PF10576 Iron-sulfur binding domain of endonuclease III LQZ07_20235 PF00633 Helix-hairpin-helix motif LQZ07_20240 PF04362 Bacterial Fe(2+) trafficking LQZ07_20255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_20255 PF00672 HAMP domain LQZ07_20255 PF02743 Cache domain LQZ07_20290 PF01554 MatE LQZ07_20295 PF08267 Cobalamin-independent synthase, N-terminal domain LQZ07_20295 PF01717 Cobalamin-independent synthase, Catalytic domain LQZ07_20300 PF03466 LysR substrate binding domain LQZ07_20300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_20305 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_20305 PF17151 Periplasmic sensor domain LQZ07_20345 PF13419 Haloacid dehalogenase-like hydrolase LQZ07_20350 PF07670 Nucleoside recognition LQZ07_20360 PF00117 Glutamine amidotransferase class-I LQZ07_20360 PF01171 PP-loop family LQZ07_20360 PF00958 GMP synthase C terminal domain LQZ07_20370 PF07238 PilZ domain LQZ07_20375 PF18073 Rubredoxin metal binding domain LQZ07_20385 PF18429 Domain of unknown function (DUF5609) LQZ07_20395 PF01048 Phosphorylase superfamily LQZ07_20400 PF01676 Metalloenzyme superfamily LQZ07_20405 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LQZ07_20405 PF02885 Glycosyl transferase family, helical bundle domain LQZ07_20405 PF00591 Glycosyl transferase family, a/b domain LQZ07_20410 PF01791 DeoC/LacD family aldolase LQZ07_20415 PF07670 Nucleoside recognition LQZ07_20415 PF07662 Na+ dependent nucleoside transporter C-terminus LQZ07_20415 PF01773 Na+ dependent nucleoside transporter N-terminus LQZ07_20430 PF01026 TatD related DNase LQZ07_20435 PF02608 ABC transporter substrate-binding protein PnrA-like LQZ07_20440 PF00005 ABC transporter LQZ07_20445 PF02653 Branched-chain amino acid transport system / permease component LQZ07_20450 PF02653 Branched-chain amino acid transport system / permease component LQZ07_20455 PF00009 Elongation factor Tu GTP binding domain LQZ07_20455 PF16658 Class II release factor RF3, C-terminal domain LQZ07_20455 PF03144 Elongation factor Tu domain 2 LQZ07_20470 PF00529 HlyD membrane-fusion protein of T1SS LQZ07_20470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_20475 PF01594 AI-2E family transporter LQZ07_20480 PF01055 Glycosyl hydrolases family 31 LQZ07_20480 PF17137 Domain of unknown function (DUF5110) LQZ07_20480 PF16338 Domain of unknown function (DUF4968) LQZ07_20485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_20485 PF03466 LysR substrate binding domain LQZ07_20495 PF01027 Inhibitor of apoptosis-promoting Bax1 LQZ07_20510 PF00331 Glycosyl hydrolase family 10 LQZ07_20535 PF00849 RNA pseudouridylate synthase LQZ07_20535 PF01479 S4 domain LQZ07_20550 PF09055 Nickel-containing superoxide dismutase LQZ07_20565 PF00027 Cyclic nucleotide-binding domain LQZ07_20565 PF13545 Crp-like helix-turn-helix domain LQZ07_20580 PF04183 IucA / IucC family LQZ07_20580 PF06276 Ferric iron reductase FhuF-like transporter LQZ07_20590 PF07715 TonB-dependent Receptor Plug Domain LQZ07_20590 PF00593 TonB dependent receptor LQZ07_20595 PF00005 ABC transporter LQZ07_20605 PF01032 FecCD transport family LQZ07_20610 PF00881 Nitroreductase family LQZ07_20615 PF06276 Ferric iron reductase FhuF-like transporter LQZ07_20615 PF04183 IucA / IucC family LQZ07_20620 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LQZ07_20625 PF01180 Dihydroorotate dehydrogenase LQZ07_20630 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQZ07_20630 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LQZ07_20635 PF08362 YcdC-like protein, C-terminal region LQZ07_20635 PF00440 Bacterial regulatory proteins, tetR family LQZ07_20640 PF07687 Peptidase dimerisation domain LQZ07_20640 PF01546 Peptidase family M20/M25/M40 LQZ07_20645 PF01979 Amidohydrolase family LQZ07_20650 PF00005 ABC transporter LQZ07_20655 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_20660 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_20665 PF09084 NMT1/THI5 like LQZ07_20685 PF03739 Lipopolysaccharide export system permease LptF/LptG LQZ07_20690 PF03739 Lipopolysaccharide export system permease LptF/LptG LQZ07_20695 PF00883 Cytosol aminopeptidase family, catalytic domain LQZ07_20695 PF02789 Cytosol aminopeptidase family, N-terminal domain LQZ07_20700 PF04364 DNA polymerase III chi subunit, HolC LQZ07_20705 PF10458 Valyl tRNA synthetase tRNA binding arm LQZ07_20705 PF08264 Anticodon-binding domain of tRNA LQZ07_20705 PF00133 tRNA synthetases class I (I, L, M and V) LQZ07_20720 PF06877 Regulator of ribonuclease activity B LQZ07_20725 PF01553 Acyltransferase LQZ07_20730 PF03989 DNA gyrase C-terminal domain, beta-propeller LQZ07_20730 PF00521 DNA gyrase/topoisomerase IV, subunit A LQZ07_20735 PF00563 EAL domain LQZ07_20735 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_20735 PF08448 PAS fold LQZ07_20740 PF01751 Toprim domain LQZ07_20740 PF00204 DNA gyrase B LQZ07_20740 PF00986 DNA gyrase B subunit, carboxyl terminus LQZ07_20740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_20745 PF05728 Uncharacterised protein family (UPF0227) LQZ07_20750 PF00149 Calcineurin-like phosphoesterase LQZ07_20755 PF06853 Protein of unknown function (DUF1249) LQZ07_20760 PF00293 NUDIX domain LQZ07_20765 PF02321 Outer membrane efflux protein LQZ07_20770 PF01467 Cytidylyltransferase-like LQZ07_20770 PF00294 pfkB family carbohydrate kinase LQZ07_20775 PF03279 Bacterial lipid A biosynthesis acyltransferase LQZ07_20780 PF08335 GlnD PII-uridylyltransferase LQZ07_20780 PF03710 Glutamate-ammonia ligase adenylyltransferase LQZ07_20785 PF00027 Cyclic nucleotide-binding domain LQZ07_20785 PF07885 Ion channel LQZ07_20800 PF01865 Protein of unknown function DUF47 LQZ07_20805 PF01384 Phosphate transporter family LQZ07_20820 PF13401 AAA domain LQZ07_20820 PF01471 Putative peptidoglycan binding domain LQZ07_20825 PF01966 HD domain LQZ07_20825 PF12627 Probable RNA and SrmB- binding site of polymerase A LQZ07_20825 PF01743 Poly A polymerase head domain LQZ07_20830 PF02673 Bacitracin resistance protein BacA LQZ07_20835 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LQZ07_20840 PF02152 Dihydroneopterin aldolase LQZ07_20845 PF02660 Glycerol-3-phosphate acyltransferase LQZ07_20850 PF00814 Glycoprotease family LQZ07_20855 PF01165 Ribosomal protein S21 LQZ07_20860 PF09424 Yqey-like protein LQZ07_20865 PF10410 DnaB-helicase binding domain of primase LQZ07_20865 PF08278 DNA primase DnaG DnaB-binding LQZ07_20865 PF08275 DNA primase catalytic core, N-terminal domain LQZ07_20865 PF01807 CHC2 zinc finger LQZ07_20870 PF03979 Sigma-70 factor, region 1.1 LQZ07_20870 PF04546 Sigma-70, non-essential region LQZ07_20870 PF00140 Sigma-70 factor, region 1.2 LQZ07_20870 PF04542 Sigma-70 region 2 LQZ07_20870 PF04539 Sigma-70 region 3 LQZ07_20870 PF04545 Sigma-70, region 4 LQZ07_20880 PF08378 Nuclease-related domain LQZ07_20900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_20900 PF00672 HAMP domain LQZ07_20915 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_20915 PF08448 PAS fold LQZ07_20935 PF00722 Glycosyl hydrolases family 16 LQZ07_20950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LQZ07_20955 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_20960 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_20960 PF12911 N-terminal TM domain of oligopeptide transport permease C LQZ07_20965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LQZ07_20965 PF00005 ABC transporter LQZ07_20970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LQZ07_20970 PF00005 ABC transporter LQZ07_20985 PF00356 Bacterial regulatory proteins, lacI family LQZ07_20990 PF00722 Glycosyl hydrolases family 16 LQZ07_20995 PF00722 Glycosyl hydrolases family 16 LQZ07_21000 PF01037 Lrp/AsnC ligand binding domain LQZ07_21000 PF13404 AsnC-type helix-turn-helix domain LQZ07_21005 PF00892 EamA-like transporter family LQZ07_21010 PF00155 Aminotransferase class I and II LQZ07_21035 PF13396 Phospholipase_D-nuclease N-terminal LQZ07_21035 PF13091 PLD-like domain LQZ07_21045 PF00999 Sodium/hydrogen exchanger family LQZ07_21055 PF00294 pfkB family carbohydrate kinase LQZ07_21060 PF00472 RF-1 domain LQZ07_21065 PF03707 Bacterial signalling protein N terminal repeat LQZ07_21065 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_21065 PF00563 EAL domain LQZ07_21070 PF01226 Formate/nitrite transporter LQZ07_21075 PF03466 LysR substrate binding domain LQZ07_21075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_21080 PF00534 Glycosyl transferases group 1 LQZ07_21080 PF13439 Glycosyltransferase Family 4 LQZ07_21085 PF13439 Glycosyltransferase Family 4 LQZ07_21085 PF00534 Glycosyl transferases group 1 LQZ07_21100 PF04264 YceI-like domain LQZ07_21105 PF01292 Prokaryotic cytochrome b561 LQZ07_21130 PF02592 Putative vitamin uptake transporter LQZ07_21150 PF01575 MaoC like domain LQZ07_21165 PF01184 GPR1/FUN34/yaaH family LQZ07_21180 PF02630 SCO1/SenC LQZ07_21190 PF01966 HD domain LQZ07_21205 PF03956 Lysine exporter LysO LQZ07_21210 PF00072 Response regulator receiver domain LQZ07_21210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_21210 PF18415 Histidine kinase receptor ArcB trans-membrane domain LQZ07_21210 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_21210 PF00989 PAS fold LQZ07_21210 PF01627 Hpt domain LQZ07_21215 PF02649 Type I GTP cyclohydrolase folE2 LQZ07_21220 PF00360 Phytochrome region LQZ07_21220 PF01590 GAF domain LQZ07_21220 PF00563 EAL domain LQZ07_21220 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_21225 PF04055 Radical SAM superfamily LQZ07_21225 PF16199 Radical_SAM C-terminal domain LQZ07_21235 PF01479 S4 domain LQZ07_21235 PF00579 tRNA synthetases class I (W and Y) LQZ07_21240 PF00652 Ricin-type beta-trefoil lectin domain LQZ07_21245 PF00171 Aldehyde dehydrogenase family LQZ07_21260 PF01048 Phosphorylase superfamily LQZ07_21270 PF01497 Periplasmic binding protein LQZ07_21275 PF08525 Opacity-associated protein A N-terminal motif LQZ07_21275 PF01551 Peptidase family M23 LQZ07_21275 PF01476 LysM domain LQZ07_21280 PF03702 Anhydro-N-acetylmuramic acid kinase LQZ07_21285 PF00873 AcrB/AcrD/AcrF family LQZ07_21295 PF01521 Iron-sulphur cluster biosynthesis LQZ07_21305 PF00202 Aminotransferase class-III LQZ07_21315 PF04304 Protein of unknown function (DUF454) LQZ07_21345 PF14814 Bifunctional transglycosylase second domain LQZ07_21345 PF00912 Transglycosylase LQZ07_21345 PF00905 Penicillin binding protein transpeptidase domain LQZ07_21365 PF13693 Winged helix-turn-helix DNA-binding LQZ07_21370 PF02914 Bacteriophage Mu transposase LQZ07_21370 PF02316 Mu DNA-binding domain LQZ07_21370 PF09039 Mu DNA binding, I gamma subdomain LQZ07_21370 PF09299 Mu transposase, C-terminal LQZ07_21375 PF13401 AAA domain LQZ07_21375 PF09077 Mu B transposition protein, C terminal LQZ07_21430 PF08461 Ribonuclease R winged-helix domain LQZ07_21435 PF11985 Protein of unknown function (DUF3486) LQZ07_21440 PF03237 Terminase-like family LQZ07_21445 PF06074 Protein of unknown function (DUF935) LQZ07_21460 PF10124 Mu-like prophage major head subunit gpT LQZ07_21470 PF07030 Protein of unknown function (DUF1320) LQZ07_21490 PF04984 Phage tail sheath protein subtilisin-like domain LQZ07_21490 PF17482 Phage tail sheath C-terminal domain LQZ07_21510 PF07157 DNA circularisation protein N-terminus LQZ07_21520 PF06890 Bacteriophage Mu Gp45 protein LQZ07_21530 PF04865 Baseplate J-like protein LQZ07_21565 PF00005 ABC transporter LQZ07_21590 PF08482 ATP-dependent helicase C-terminal LQZ07_21590 PF00271 Helicase conserved C-terminal domain LQZ07_21590 PF04408 Helicase associated domain (HA2) LQZ07_21590 PF00270 DEAD/DEAH box helicase LQZ07_21595 PF03749 Sugar fermentation stimulation protein RE domain LQZ07_21595 PF17746 SfsA N-terminal OB domain LQZ07_21600 PF01258 Prokaryotic dksA/traR C4-type zinc finger LQZ07_21605 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQZ07_21610 PF12627 Probable RNA and SrmB- binding site of polymerase A LQZ07_21610 PF12626 Polymerase A arginine-rich C-terminus LQZ07_21610 PF01743 Poly A polymerase head domain LQZ07_21615 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LQZ07_21620 PF02548 Ketopantoate hydroxymethyltransferase LQZ07_21625 PF02569 Pantoate-beta-alanine ligase LQZ07_21630 PF02261 Aspartate decarboxylase LQZ07_21640 PF13426 PAS domain LQZ07_21640 PF08447 PAS fold LQZ07_21640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_21650 PF02390 Putative methyltransferase LQZ07_21655 PF01061 ABC-2 type transporter LQZ07_21660 PF00005 ABC transporter LQZ07_21665 PF00156 Phosphoribosyl transferase domain LQZ07_21670 PF00440 Bacterial regulatory proteins, tetR family LQZ07_21675 PF02875 Mur ligase family, glutamate ligase domain LQZ07_21675 PF08245 Mur ligase middle domain LQZ07_21675 PF01225 Mur ligase family, catalytic domain LQZ07_21695 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LQZ07_21705 PF01507 Phosphoadenosine phosphosulfate reductase family LQZ07_21710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LQZ07_21710 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LQZ07_21715 PF00175 Oxidoreductase NAD-binding domain LQZ07_21715 PF00258 Flavodoxin LQZ07_21715 PF00667 FAD binding domain LQZ07_21720 PF02743 Cache domain LQZ07_21720 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_21720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_21725 PF00158 Sigma-54 interaction domain LQZ07_21725 PF02954 Bacterial regulatory protein, Fis family LQZ07_21725 PF00072 Response regulator receiver domain LQZ07_21730 PF03480 Bacterial extracellular solute-binding protein, family 7 LQZ07_21735 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LQZ07_21740 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LQZ07_21745 PF03061 Thioesterase superfamily LQZ07_21750 PF00158 Sigma-54 interaction domain LQZ07_21750 PF00072 Response regulator receiver domain LQZ07_21750 PF02954 Bacterial regulatory protein, Fis family LQZ07_21755 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_21755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_21760 PF01471 Putative peptidoglycan binding domain LQZ07_21760 PF13401 AAA domain LQZ07_21770 PF13614 AAA domain LQZ07_21785 PF02397 Bacterial sugar transferase LQZ07_21800 PF01522 Polysaccharide deacetylase LQZ07_21815 PF00132 Bacterial transferase hexapeptide (six repeats) LQZ07_21815 PF06426 Serine acetyltransferase, N-terminal LQZ07_21825 PF01522 Polysaccharide deacetylase LQZ07_21830 PF13439 Glycosyltransferase Family 4 LQZ07_21830 PF00534 Glycosyl transferases group 1 LQZ07_21845 PF01943 Polysaccharide biosynthesis protein LQZ07_21850 PF00535 Glycosyl transferase family 2 LQZ07_21855 PF04230 Polysaccharide pyruvyl transferase LQZ07_21870 PF01370 NAD dependent epimerase/dehydratase family LQZ07_21875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LQZ07_21875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LQZ07_21875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LQZ07_21910 PF14490 Helix-hairpin-helix containing domain LQZ07_21910 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LQZ07_21910 PF13538 UvrD-like helicase C-terminal domain LQZ07_21920 PF02796 Helix-turn-helix domain of resolvase LQZ07_21920 PF00239 Resolvase, N terminal domain LQZ07_22015 PF02899 Phage integrase, N-terminal SAM-like domain LQZ07_22015 PF00589 Phage integrase family LQZ07_22020 PF00436 Single-strand binding protein family LQZ07_22025 PF07690 Major Facilitator Superfamily LQZ07_22030 PF17755 UvrA DNA-binding domain LQZ07_22030 PF17760 UvrA interaction domain LQZ07_22030 PF00005 ABC transporter LQZ07_22065 PF00271 Helicase conserved C-terminal domain LQZ07_22065 PF12137 RNA polymerase recycling family C-terminal LQZ07_22065 PF00176 SNF2 family N-terminal domain LQZ07_22065 PF18339 RapA N-terminal Tudor like domain 1 LQZ07_22065 PF18337 RapA N-terminal Tudor like domain LQZ07_22070 PF00849 RNA pseudouridylate synthase LQZ07_22080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQZ07_22080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQZ07_22085 PF05099 Tellurite resistance protein TerB LQZ07_22085 PF00226 DnaJ domain LQZ07_22090 PF00483 Nucleotidyl transferase LQZ07_22095 PF01636 Phosphotransferase enzyme family LQZ07_22100 PF03968 OstA-like protein LQZ07_22100 PF04453 LPS transport system D LQZ07_22105 PF00639 PPIC-type PPIASE domain LQZ07_22105 PF09312 SurA N-terminal domain LQZ07_22110 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LQZ07_22115 PF00398 Ribosomal RNA adenine dimethylase LQZ07_22120 PF04379 ApaG domain LQZ07_22125 PF00149 Calcineurin-like phosphoesterase LQZ07_22130 PF00186 Dihydrofolate reductase LQZ07_22135 PF12821 Threonine/Serine exporter, ThrE LQZ07_22140 PF06738 Putative threonine/serine exporter LQZ07_22145 PF01018 GTP1/OBG LQZ07_22145 PF01926 50S ribosome-binding GTPase LQZ07_22150 PF01016 Ribosomal L27 protein LQZ07_22155 PF00829 Ribosomal prokaryotic L21 protein LQZ07_22160 PF00348 Polyprenyl synthetase LQZ07_22165 PF00709 Adenylosuccinate synthetase LQZ07_22170 PF01145 SPFH domain / Band 7 family LQZ07_22175 PF01145 SPFH domain / Band 7 family LQZ07_22175 PF12221 Bacterial membrane protein N terminal LQZ07_22180 PF16360 GTP-binding GTPase Middle Region LQZ07_22180 PF13167 GTP-binding GTPase N-terminal LQZ07_22180 PF01926 50S ribosome-binding GTPase LQZ07_22185 PF17209 Hfq protein LQZ07_22195 PF01119 DNA mismatch repair protein, C-terminal domain LQZ07_22195 PF08676 MutL C terminal dimerisation domain LQZ07_22200 PF01520 N-acetylmuramoyl-L-alanine amidase LQZ07_22205 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LQZ07_22210 PF01256 Carbohydrate kinase LQZ07_22210 PF03853 YjeF-related protein N-terminus LQZ07_22215 PF08331 Domain of unknown function (DUF1730) LQZ07_22220 PF00480 ROK family LQZ07_22245 PF00929 Exonuclease LQZ07_22250 PF03193 RsgA GTPase LQZ07_22255 PF02666 Phosphatidylserine decarboxylase LQZ07_22260 PF00924 Mechanosensitive ion channel LQZ07_22260 PF12795 Mechanosensitive ion channel porin domain LQZ07_22260 PF12794 Mechanosensitive ion channel inner membrane domain 1 LQZ07_22265 PF02080 TrkA-C domain LQZ07_22265 PF03600 Citrate transporter LQZ07_22270 PF00152 tRNA synthetases class II (D, K and N) LQZ07_22275 PF00890 FAD binding domain LQZ07_22275 PF02910 Fumarate reductase flavoprotein C-term LQZ07_22280 PF13085 2Fe-2S iron-sulfur cluster binding domain LQZ07_22280 PF13183 4Fe-4S dicluster domain LQZ07_22285 PF02300 Fumarate reductase subunit C LQZ07_22290 PF02313 Fumarate reductase subunit D LQZ07_22305 PF09285 Elongation factor P, C-terminal LQZ07_22305 PF01132 Elongation factor P (EF-P) OB domain LQZ07_22305 PF08207 Elongation factor P (EF-P) KOW-like domain LQZ07_22310 PF04055 Radical SAM superfamily LQZ07_22320 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_22320 PF00563 EAL domain LQZ07_22320 PF03707 Bacterial signalling protein N terminal repeat LQZ07_22340 PF02156 Glycosyl hydrolase family 26 LQZ07_22355 PF02743 Cache domain LQZ07_22355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_22355 PF00672 HAMP domain LQZ07_22360 PF02156 Glycosyl hydrolase family 26 LQZ07_22375 PF00293 NUDIX domain LQZ07_22390 PF13407 Periplasmic binding protein domain LQZ07_22400 PF01554 MatE LQZ07_22410 PF01238 Phosphomannose isomerase type I LQZ07_22415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_22415 PF08447 PAS fold LQZ07_22415 PF13426 PAS domain LQZ07_22420 PF02264 LamB porin LQZ07_22425 PF04041 beta-1,4-mannooligosaccharide phosphorylase LQZ07_22430 PF04041 beta-1,4-mannooligosaccharide phosphorylase LQZ07_22435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQZ07_22435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQZ07_22435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQZ07_22435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQZ07_22440 PF00356 Bacterial regulatory proteins, lacI family LQZ07_22440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LQZ07_22445 PF00005 ABC transporter LQZ07_22445 PF08402 TOBE domain LQZ07_22460 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_22465 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_22500 PF05524 PEP-utilising enzyme, N-terminal LQZ07_22500 PF00391 PEP-utilising enzyme, mobile domain LQZ07_22500 PF02896 PEP-utilising enzyme, TIM barrel domain LQZ07_22500 PF00381 PTS HPr component phosphorylation site LQZ07_22500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQZ07_22505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LQZ07_22505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQZ07_22505 PF02378 Phosphotransferase system, EIIC LQZ07_22515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LQZ07_22520 PF12833 Helix-turn-helix domain LQZ07_22545 PF02796 Helix-turn-helix domain of resolvase LQZ07_22545 PF00239 Resolvase, N terminal domain LQZ07_22595 PF13356 Arm DNA-binding domain LQZ07_22595 PF00589 Phage integrase family LQZ07_22600 PF00118 TCP-1/cpn60 chaperonin family LQZ07_22605 PF00166 Chaperonin 10 Kd subunit LQZ07_22615 PF04186 FxsA cytoplasmic membrane protein LQZ07_22620 PF03091 CutA1 divalent ion tolerance protein LQZ07_22625 PF11412 Disulphide bond corrector protein DsbC LQZ07_22625 PF02683 Cytochrome C biogenesis protein transmembrane region LQZ07_22630 PF00672 HAMP domain LQZ07_22630 PF12729 Four helix bundle sensory module for signal transduction LQZ07_22630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_22635 PF03466 LysR substrate binding domain LQZ07_22635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_22640 PF02311 AraC-like ligand binding domain LQZ07_22640 PF12833 Helix-turn-helix domain LQZ07_22660 PF01810 LysE type translocator LQZ07_22665 PF00196 Bacterial regulatory proteins, luxR family LQZ07_22665 PF00072 Response regulator receiver domain LQZ07_22680 PF00512 His Kinase A (phospho-acceptor) domain LQZ07_22680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQZ07_22705 PF16177 Acetyl-coenzyme A synthetase N-terminus LQZ07_22705 PF00501 AMP-binding enzyme LQZ07_22705 PF13193 AMP-binding enzyme C-terminal domain LQZ07_22715 PF00873 AcrB/AcrD/AcrF family LQZ07_22720 PF00529 HlyD membrane-fusion protein of T1SS LQZ07_22720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQZ07_22725 PF00440 Bacterial regulatory proteins, tetR family LQZ07_22730 PF02311 AraC-like ligand binding domain LQZ07_22730 PF12833 Helix-turn-helix domain LQZ07_22735 PF01554 MatE LQZ07_22740 PF01220 Dehydroquinase class II LQZ07_22745 PF00364 Biotin-requiring enzyme LQZ07_22750 PF00289 Biotin carboxylase, N-terminal domain LQZ07_22750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQZ07_22750 PF02785 Biotin carboxylase C-terminal domain LQZ07_22755 PF12706 Beta-lactamase superfamily domain LQZ07_22775 PF01207 Dihydrouridine synthase (Dus) LQZ07_22780 PF02954 Bacterial regulatory protein, Fis family LQZ07_22790 PF08378 Nuclease-related domain LQZ07_22815 PF05840 Bacteriophage replication gene A protein (GPA) LQZ07_22865 PF01048 Phosphorylase superfamily LQZ07_22880 PF00376 MerR family regulatory protein LQZ07_22880 PF09278 MerR, DNA binding LQZ07_22890 PF00376 MerR family regulatory protein LQZ07_22890 PF09278 MerR, DNA binding LQZ07_22900 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_22905 PF01808 AICARFT/IMPCHase bienzyme LQZ07_22905 PF02142 MGS-like domain LQZ07_22910 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LQZ07_22910 PF02843 Phosphoribosylglycinamide synthetase, C domain LQZ07_22910 PF02844 Phosphoribosylglycinamide synthetase, N domain LQZ07_22930 PF03352 Methyladenine glycosylase LQZ07_22935 PF01757 Acyltransferase family LQZ07_22945 PF00550 Phosphopantetheine attachment site LQZ07_22945 PF08659 KR domain LQZ07_22945 PF02801 Beta-ketoacyl synthase, C-terminal domain LQZ07_22945 PF00109 Beta-ketoacyl synthase, N-terminal domain LQZ07_22945 PF16197 Ketoacyl-synthetase C-terminal extension LQZ07_22945 PF08240 Alcohol dehydrogenase GroES-like domain LQZ07_22945 PF00698 Acyl transferase domain LQZ07_22945 PF14765 Polyketide synthase dehydratase LQZ07_22950 PF03480 Bacterial extracellular solute-binding protein, family 7 LQZ07_22955 PF00230 Major intrinsic protein LQZ07_22970 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_22975 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_22980 PF17912 MalK OB fold domain LQZ07_22980 PF00005 ABC transporter LQZ07_22985 PF00682 HMGL-like LQZ07_22985 PF08502 LeuA allosteric (dimerisation) domain LQZ07_22990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQZ07_23005 PF00216 Bacterial DNA-binding protein LQZ07_23010 PF04222 Protein of unknown function (DUF416) LQZ07_23015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQZ07_23045 PF01925 Sulfite exporter TauE/SafE LQZ07_23055 PF01208 Uroporphyrinogen decarboxylase (URO-D) LQZ07_23060 PF09297 NADH pyrophosphatase zinc ribbon domain LQZ07_23060 PF00293 NUDIX domain LQZ07_23065 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LQZ07_23070 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LQZ07_23070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQZ07_23080 PF04102 SlyX LQZ07_23085 PF00583 Acetyltransferase (GNAT) family LQZ07_23095 PF12848 ABC transporter LQZ07_23095 PF00005 ABC transporter LQZ07_23105 PF00571 CBS domain LQZ07_23105 PF01769 Divalent cation transporter LQZ07_23105 PF03448 MgtE intracellular N domain LQZ07_23110 PF02310 B12 binding domain LQZ07_23110 PF02607 B12 binding domain LQZ07_23110 PF02965 Vitamin B12 dependent methionine synthase, activation domain LQZ07_23110 PF00809 Pterin binding enzyme LQZ07_23110 PF02574 Homocysteine S-methyltransferase LQZ07_23115 PF04204 Homoserine O-succinyltransferase LQZ07_23120 PF01966 HD domain LQZ07_23125 PF01196 Ribosomal protein L17 LQZ07_23130 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LQZ07_23130 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LQZ07_23130 PF01000 RNA polymerase Rpb3/RpoA insert domain LQZ07_23135 PF00163 Ribosomal protein S4/S9 N-terminal domain LQZ07_23135 PF01479 S4 domain LQZ07_23140 PF00411 Ribosomal protein S11 LQZ07_23145 PF00416 Ribosomal protein S13/S18 LQZ07_23150 PF00444 Ribosomal protein L36 LQZ07_23155 PF00344 SecY translocase LQZ07_23160 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LQZ07_23165 PF00327 Ribosomal protein L30p/L7e LQZ07_23170 PF03719 Ribosomal protein S5, C-terminal domain LQZ07_23170 PF00333 Ribosomal protein S5, N-terminal domain LQZ07_23175 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LQZ07_23180 PF00347 Ribosomal protein L6 LQZ07_23185 PF00410 Ribosomal protein S8 LQZ07_23190 PF00253 Ribosomal protein S14p/S29e LQZ07_23195 PF00281 Ribosomal protein L5 LQZ07_23195 PF00673 ribosomal L5P family C-terminus LQZ07_23200 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LQZ07_23205 PF00238 Ribosomal protein L14p/L23e LQZ07_23235 PF00132 Bacterial transferase hexapeptide (six repeats) LQZ07_23245 PF13673 Acetyltransferase (GNAT) domain LQZ07_23250 PF08501 Shikimate dehydrogenase substrate binding domain LQZ07_23250 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LQZ07_23250 PF01488 Shikimate / quinate 5-dehydrogenase LQZ07_23255 PF04219 Protein of unknown function, DUF LQZ07_23260 PF01218 Coproporphyrinogen III oxidase LQZ07_23265 PF01300 Telomere recombination LQZ07_23270 PF00950 ABC 3 transport family LQZ07_23275 PF00005 ABC transporter LQZ07_23280 PF01297 Zinc-uptake complex component A periplasmic LQZ07_23285 PF04055 Radical SAM superfamily LQZ07_23285 PF06969 HemN C-terminal domain LQZ07_23290 PF10675 Protein of unknown function (DUF2489) LQZ07_23295 PF04220 Der GTPase activator (YihI) LQZ07_23305 PF00034 Cytochrome c LQZ07_23310 PF01926 50S ribosome-binding GTPase LQZ07_23315 PF04616 Glycosyl hydrolases family 43 LQZ07_23320 PF01612 3'-5' exonuclease LQZ07_23320 PF00476 DNA polymerase family A LQZ07_23320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LQZ07_23320 PF01367 5'-3' exonuclease, C-terminal SAM fold LQZ07_23330 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LQZ07_23335 PF00270 DEAD/DEAH box helicase LQZ07_23335 PF00271 Helicase conserved C-terminal domain LQZ07_23335 PF00570 HRDC domain LQZ07_23335 PF16124 RecQ zinc-binding LQZ07_23335 PF09382 RQC domain LQZ07_23340 PF03061 Thioesterase superfamily LQZ07_23350 PF00892 EamA-like transporter family LQZ07_23355 PF13361 UvrD-like helicase C-terminal domain LQZ07_23355 PF00580 UvrD/REP helicase N-terminal domain LQZ07_23360 PF13419 Haloacid dehalogenase-like hydrolase LQZ07_23365 PF00589 Phage integrase family LQZ07_23365 PF02899 Phage integrase, N-terminal SAM-like domain LQZ07_23375 PF01678 Diaminopimelate epimerase LQZ07_23380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LQZ07_23380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LQZ07_23390 PF01491 Frataxin-like domain LQZ07_23395 PF12633 Adenylate cyclase NT domain LQZ07_23395 PF01295 Adenylate cyclase, class-I LQZ07_23400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LQZ07_23400 PF03900 Porphobilinogen deaminase, C-terminal domain LQZ07_23405 PF02602 Uroporphyrinogen-III synthase HemD LQZ07_23415 PF07219 HemY protein N-terminus LQZ07_23415 PF07719 Tetratricopeptide repeat LQZ07_23420 PF00970 Oxidoreductase FAD-binding domain LQZ07_23420 PF00175 Oxidoreductase NAD-binding domain LQZ07_23425 PF00970 Oxidoreductase FAD-binding domain LQZ07_23425 PF00175 Oxidoreductase NAD-binding domain LQZ07_23425 PF00111 2Fe-2S iron-sulfur cluster binding domain LQZ07_23430 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LQZ07_23440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQZ07_23440 PF07498 Rho termination factor, N-terminal domain LQZ07_23440 PF07497 Rho termination factor, RNA-binding domain LQZ07_23445 PF00085 Thioredoxin LQZ07_23450 PF00271 Helicase conserved C-terminal domain LQZ07_23450 PF00270 DEAD/DEAH box helicase LQZ07_23455 PF02541 Ppx/GppA phosphatase family LQZ07_23465 PF00731 AIR carboxylase LQZ07_23470 PF02222 ATP-grasp domain LQZ07_23470 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LQZ07_23475 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_23475 PF07694 5TMR of 5TMR-LYT LQZ07_23495 PF00490 Delta-aminolevulinic acid dehydratase LQZ07_23500 PF00356 Bacterial regulatory proteins, lacI family LQZ07_23505 PF01266 FAD dependent oxidoreductase LQZ07_23510 PF07722 Peptidase C26 LQZ07_23530 PF02687 FtsX-like permease family LQZ07_23530 PF00005 ABC transporter LQZ07_23530 PF12704 MacB-like periplasmic core domain LQZ07_23535 PF00005 ABC transporter LQZ07_23535 PF00027 Cyclic nucleotide-binding domain LQZ07_23560 PF00072 Response regulator receiver domain LQZ07_23560 PF01584 CheW-like domain LQZ07_23565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_23565 PF03466 LysR substrate binding domain LQZ07_23570 PF13417 Glutathione S-transferase, N-terminal domain LQZ07_23575 PF00107 Zinc-binding dehydrogenase LQZ07_23575 PF16884 N-terminal domain of oxidoreductase LQZ07_23585 PF00005 ABC transporter LQZ07_23585 PF08402 TOBE domain LQZ07_23595 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_23600 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_23605 PF00462 Glutaredoxin LQZ07_23605 PF08534 Redoxin LQZ07_23610 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQZ07_23610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQZ07_23615 PF00563 EAL domain LQZ07_23615 PF08448 PAS fold LQZ07_23615 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_23620 PF07055 Enoyl reductase FAD binding domain LQZ07_23620 PF12241 Trans-2-enoyl-CoA reductase catalytic region LQZ07_23620 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LQZ07_23625 PF13673 Acetyltransferase (GNAT) domain LQZ07_23630 PF04445 Putative SAM-dependent methyltransferase LQZ07_23635 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_23635 PF00563 EAL domain LQZ07_23635 PF08448 PAS fold LQZ07_23640 PF01522 Polysaccharide deacetylase LQZ07_23645 PF00535 Glycosyl transferase family 2 LQZ07_23650 PF13419 Haloacid dehalogenase-like hydrolase LQZ07_23675 PF00107 Zinc-binding dehydrogenase LQZ07_23675 PF08240 Alcohol dehydrogenase GroES-like domain LQZ07_23680 PF00155 Aminotransferase class I and II LQZ07_23685 PF00440 Bacterial regulatory proteins, tetR family LQZ07_23690 PF01370 NAD dependent epimerase/dehydratase family LQZ07_23695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LQZ07_23700 PF00535 Glycosyl transferase family 2 LQZ07_23715 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LQZ07_23715 PF00534 Glycosyl transferases group 1 LQZ07_23725 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LQZ07_23730 PF00535 Glycosyl transferase family 2 LQZ07_23740 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LQZ07_23745 PF01467 Cytidylyltransferase-like LQZ07_23750 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LQZ07_23750 PF06827 Zinc finger found in FPG and IleRS LQZ07_23750 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LQZ07_23760 PF00471 Ribosomal protein L33 LQZ07_23765 PF00830 Ribosomal L28 family LQZ07_23770 PF04002 RadC-like JAB domain LQZ07_23775 PF02441 Flavoprotein LQZ07_23775 PF04127 DNA / pantothenate metabolism flavoprotein LQZ07_23780 PF00692 dUTPase LQZ07_23785 PF00440 Bacterial regulatory proteins, tetR family LQZ07_23790 PF05552 Conserved TM helix LQZ07_23790 PF00924 Mechanosensitive ion channel LQZ07_23810 PF00156 Phosphoribosyl transferase domain LQZ07_23815 PF03725 3' exoribonuclease family, domain 2 LQZ07_23815 PF01138 3' exoribonuclease family, domain 1 LQZ07_23820 PF03755 YicC-like family, N-terminal region LQZ07_23820 PF08340 Domain of unknown function (DUF1732) LQZ07_23915 PF01443 Viral (Superfamily 1) RNA helicase LQZ07_23915 PF03389 MobA/MobL family LQZ07_23915 PF17841 BID domain of Bartonella effector protein (Bep) LQZ07_23945 PF18494 Pullulanase Ins domain LQZ07_23945 PF17967 Pullulanase N2 domain LQZ07_23945 PF11852 Domain of unknown function (DUF3372) LQZ07_23945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQZ07_23945 PF03714 Bacterial pullanase-associated domain LQZ07_23955 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_23970 PF00924 Mechanosensitive ion channel LQZ07_23970 PF05552 Conserved TM helix LQZ07_23980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQZ07_23980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LQZ07_24000 PF00180 Isocitrate/isopropylmalate dehydrogenase LQZ07_24010 PF07005 Sugar-binding N-terminal domain LQZ07_24010 PF17042 Nucleotide-binding C-terminal domain LQZ07_24015 PF00596 Class II Aldolase and Adducin N-terminal domain LQZ07_24025 PF06224 Winged helix DNA-binding domain LQZ07_24065 PF01380 SIS domain LQZ07_24070 PF08220 DeoR-like helix-turn-helix domain LQZ07_24070 PF00455 DeoR C terminal sensor domain LQZ07_24075 PF04116 Fatty acid hydroxylase superfamily LQZ07_24095 PF07308 Protein of unknown function (DUF1456) LQZ07_24105 PF13409 Glutathione S-transferase, N-terminal domain LQZ07_24110 PF05726 Pirin C-terminal cupin domain LQZ07_24110 PF02678 Pirin LQZ07_24115 PF07681 DoxX LQZ07_24120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQZ07_24120 PF03466 LysR substrate binding domain LQZ07_24125 PF01145 SPFH domain / Band 7 family LQZ07_24140 PF05698 Bacterial trigger factor protein (TF) C-terminus LQZ07_24145 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_24150 PF03167 Uracil DNA glycosylase superfamily LQZ07_24155 PF03976 Polyphosphate kinase 2 (PPK2) LQZ07_24160 PF00625 Guanylate kinase LQZ07_24165 PF01192 RNA polymerase Rpb6 LQZ07_24170 PF04607 Region found in RelA / SpoT proteins LQZ07_24170 PF13291 ACT domain LQZ07_24170 PF02824 TGS domain LQZ07_24175 PF12105 SpoU, rRNA methylase, C-terminal LQZ07_24175 PF00588 SpoU rRNA Methylase family LQZ07_24180 PF00672 HAMP domain LQZ07_24180 PF17200 Single Cache domain 2 LQZ07_24180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQZ07_24195 PF01553 Acyltransferase LQZ07_24210 PF01323 DSBA-like thioredoxin domain LQZ07_24215 PF00501 AMP-binding enzyme LQZ07_24220 PF01928 CYTH domain LQZ07_24225 PF01636 Phosphotransferase enzyme family LQZ07_24235 PF12801 4Fe-4S binding domain LQZ07_24235 PF13746 4Fe-4S dicluster domain LQZ07_24235 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LQZ07_24240 PF06288 Protein of unknown function (DUF1040) LQZ07_24245 PF00563 EAL domain LQZ07_24245 PF01590 GAF domain LQZ07_24245 PF00990 Diguanylate cyclase, GGDEF domain LQZ07_24245 PF00360 Phytochrome region LQZ07_24250 PF00342 Phosphoglucose isomerase LQZ07_24255 PF00132 Bacterial transferase hexapeptide (six repeats) LQZ07_24255 PF12464 Maltose acetyltransferase LQZ07_24260 PF03104 DNA polymerase family B, exonuclease domain LQZ07_24260 PF00136 DNA polymerase family B LQZ07_24275 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQZ07_24275 PF00128 Alpha amylase, catalytic domain LQZ07_24290 PF01554 MatE LQZ07_24295 PF03458 UPF0126 domain LQZ07_24300 PF02540 NAD synthase LQZ07_24305 PF02887 Pyruvate kinase, alpha/beta domain LQZ07_24305 PF00224 Pyruvate kinase, barrel domain LQZ07_24315 PF00924 Mechanosensitive ion channel LQZ07_24315 PF05552 Conserved TM helix LQZ07_24330 PF00132 Bacterial transferase hexapeptide (six repeats) LQZ07_24330 PF12804 MobA-like NTP transferase domain LQZ07_24335 PF05762 VWA domain containing CoxE-like protein LQZ07_24340 PF07728 AAA domain (dynein-related subfamily) LQZ07_24340 PF17868 AAA lid domain LQZ07_24340 PF12592 Protein of unknown function (DUF3763) LQZ07_24345 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LQZ07_24345 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LQZ07_24350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQZ07_24350 PF02874 ATP synthase alpha/beta family, beta-barrel domain LQZ07_24355 PF00231 ATP synthase LQZ07_24360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQZ07_24360 PF00306 ATP synthase alpha/beta chain, C terminal domain LQZ07_24360 PF02874 ATP synthase alpha/beta family, beta-barrel domain LQZ07_24365 PF00213 ATP synthase delta (OSCP) subunit LQZ07_24370 PF00430 ATP synthase B/B' CF(0) LQZ07_24375 PF00137 ATP synthase subunit C LQZ07_24380 PF00119 ATP synthase A chain LQZ07_24390 PF17762 HTH domain found in ParB protein LQZ07_24390 PF02195 ParB-like nuclease domain LQZ07_24395 PF13614 AAA domain LQZ07_24400 PF02527 rRNA small subunit methyltransferase G LQZ07_24405 PF01134 Glucose inhibited division protein A LQZ07_24405 PF13932 GidA associated domain LQZ07_24410 PF00258 Flavodoxin LQZ07_24425 PF02322 Cytochrome bd terminal oxidase subunit II LQZ07_24430 PF01654 Cytochrome bd terminal oxidase subunit I LQZ07_24465 PF00144 Beta-lactamase LQZ07_24485 PF01926 50S ribosome-binding GTPase LQZ07_24485 PF12631 MnmE helical domain LQZ07_24485 PF10396 GTP-binding protein TrmE N-terminus LQZ07_24490 PF02096 60Kd inner membrane protein LQZ07_24490 PF14849 YidC periplasmic domain LQZ07_24495 PF01809 Putative membrane protein insertion efficiency factor LQZ07_24500 PF00825 Ribonuclease P LQZ07_24505 PF00468 Ribosomal protein L34 LQZ07_24510 PF00005 ABC transporter LQZ07_24515 PF00528 Binding-protein-dependent transport system inner membrane component LQZ07_24520 PF00497 Bacterial extracellular solute-binding proteins, family 3