locus-tag class description CF65_00002 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CF65_00002 IPR001001 DNA polymerase III, beta sliding clamp CF65_00002 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CF65_00002 IPR022637 DNA polymerase III, beta sliding clamp, central CF65_00003 IPR042174 DNA-binding RecF, domain 2 CF65_00003 IPR018078 DNA-binding, RecF, conserved site CF65_00003 IPR003395 RecF/RecN/SMC, N-terminal CF65_00003 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00003 IPR001238 DNA-binding, RecF CF65_00004 IPR041698 Methyltransferase domain 25 CF65_00004 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00007 IPR001424 Superoxide dismutase, copper/zinc binding domain CF65_00007 IPR018152 Superoxide dismutase, copper/zinc, binding site CF65_00007 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone CF65_00007 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily CF65_00010 IPR001584 Integrase, catalytic core CF65_00010 IPR036397 Ribonuclease H superfamily CF65_00010 IPR012337 Ribonuclease H-like superfamily CF65_00010 IPR038965 Transposase InsF-like CF65_00010 IPR025948 HTH-like domain CF65_00015 IPR036291 NAD(P)-binding domain superfamily CF65_00015 IPR001891 Malic oxidoreductase CF65_00015 IPR012302 Malic enzyme, NAD-binding CF65_00015 IPR037062 Malic enzyme, N-terminal domain superfamily CF65_00015 IPR012301 Malic enzyme, N-terminal domain CF65_00015 IPR015884 Malic enzyme, conserved site CF65_00021 IPR014016 UvrD-like helicase, ATP-binding domain CF65_00021 IPR034739 UvrD/AddA helicase, N-terminal CF65_00021 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00021 IPR022161 DNA helicase IV, N-terminal domain CF65_00021 IPR000212 DNA helicase, UvrD/REP type CF65_00021 IPR014017 UvrD-like DNA helicase, C-terminal CF65_00024 IPR001387 Cro/C1-type helix-turn-helix domain CF65_00024 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CF65_00029 IPR002941 DNA methylase N-4/N-6 CF65_00029 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00029 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_00029 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CF65_00029 IPR001091 Restriction/modification DNA-methylase CF65_00036 IPR012337 Ribonuclease H-like superfamily CF65_00036 IPR001584 Integrase, catalytic core CF65_00036 IPR036397 Ribonuclease H superfamily CF65_00038 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like CF65_00038 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_00038 IPR023166 HI0933-like insert domain superfamily CF65_00039 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF CF65_00039 IPR005616 CcmH/CycL/Ccl2/NrfF family CF65_00039 IPR013026 Tetratricopeptide repeat-containing domain CF65_00039 IPR019734 Tetratricopeptide repeat CF65_00039 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_00039 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CF65_00040 IPR036249 Thioredoxin-like superfamily CF65_00040 IPR017937 Thioredoxin, conserved site CF65_00040 IPR013766 Thioredoxin domain CF65_00040 IPR013740 Redoxin CF65_00040 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CF65_00041 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE CF65_00041 IPR003570 Cytochrome c-type biogenesis protein NrfE CF65_00041 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CF65_00041 IPR003568 Cytochrome c-type biogenesis protein CcmF CF65_00041 IPR003567 Cytochrome c-type biogenesis protein CF65_00041 IPR002541 Cytochrome c assembly protein CF65_00043 IPR017566 NrfD CF65_00043 IPR005614 NrfD family CF65_00044 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00044 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_00044 IPR017567 Cytochrome c nitrite reductase, Fe-S protein CF65_00044 IPR006311 Twin-arginine translocation pathway, signal sequence CF65_00046 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit CF65_00046 IPR011031 Multihaem cytochrome CF65_00046 IPR036280 Multiheme cytochrome superfamily CF65_00047 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit CF65_00047 IPR003321 Cytochrome c552 CF65_00047 IPR036280 Multiheme cytochrome superfamily CF65_00047 IPR011031 Multihaem cytochrome CF65_00050 IPR019734 Tetratricopeptide repeat CF65_00050 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_00050 IPR013026 Tetratricopeptide repeat-containing domain CF65_00050 IPR017560 Cytochrome c-type biogenesis protein CcmI CF65_00050 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CF65_00050 IPR005616 CcmH/CycL/Ccl2/NrfF family CF65_00052 IPR019734 Tetratricopeptide repeat CF65_00052 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_00052 IPR013026 Tetratricopeptide repeat-containing domain CF65_00052 IPR017560 Cytochrome c-type biogenesis protein CcmI CF65_00052 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CF65_00052 IPR005616 CcmH/CycL/Ccl2/NrfF family CF65_00054 IPR013766 Thioredoxin domain CF65_00054 IPR017937 Thioredoxin, conserved site CF65_00054 IPR036249 Thioredoxin-like superfamily CF65_00054 IPR013740 Redoxin CF65_00054 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CF65_00055 IPR002541 Cytochrome c assembly protein CF65_00055 IPR003567 Cytochrome c-type biogenesis protein CF65_00055 IPR003568 Cytochrome c-type biogenesis protein CcmF CF65_00055 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CF65_00056 IPR004329 CcmE/CycJ protein CF65_00056 IPR036127 CcmE-like superfamily CF65_00057 IPR007078 Haem exporter protein D (CcmD) CF65_00058 IPR003557 Cytochrome c-type biogenesis protein CcmC CF65_00058 IPR002541 Cytochrome c assembly protein CF65_00059 IPR003544 Cytochrome c-type biogenesis protein CcmB CF65_00059 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CF65_00061 IPR005895 ABC transporter, haem export, CcmA CF65_00061 IPR003439 ABC transporter-like CF65_00061 IPR003593 AAA+ ATPase domain CF65_00061 IPR017871 ABC transporter, conserved site CF65_00061 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00062 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CF65_00062 IPR011701 Major facilitator superfamily CF65_00062 IPR020846 Major facilitator superfamily domain CF65_00062 IPR036259 MFS transporter superfamily CF65_00064 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CF65_00064 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CF65_00064 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CF65_00064 IPR020103 Pseudouridine synthase, catalytic domain superfamily CF65_00064 IPR002942 RNA-binding S4 domain CF65_00064 IPR006145 Pseudouridine synthase, RsuA/RluA CF65_00064 IPR036986 RNA-binding S4 domain superfamily CF65_00066 IPR015884 Malic enzyme, conserved site CF65_00066 IPR012301 Malic enzyme, N-terminal domain CF65_00066 IPR042112 Phosphate acetyltransferase, domain 2 CF65_00066 IPR012302 Malic enzyme, NAD-binding CF65_00066 IPR012188 NAD(P)-dependent malic enzyme CF65_00066 IPR036291 NAD(P)-binding domain superfamily CF65_00066 IPR042113 Phosphate acetyltransferase, domain 1 CF65_00066 IPR037062 Malic enzyme, N-terminal domain superfamily CF65_00066 IPR002505 Phosphate acetyl/butaryl transferase CF65_00068 IPR019832 Manganese/iron superoxide dismutase, C-terminal CF65_00068 IPR019833 Manganese/iron superoxide dismutase, binding site CF65_00068 IPR001189 Manganese/iron superoxide dismutase CF65_00068 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CF65_00068 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CF65_00068 IPR019831 Manganese/iron superoxide dismutase, N-terminal CF65_00071 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CF65_00072 IPR018392 LysM domain CF65_00072 IPR036779 LysM domain superfamily CF65_00072 IPR014248 Spore coat assembly protein SafA CF65_00075 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CF65_00076 IPR006156 Dihydroneopterin aldolase CF65_00076 IPR006157 Dihydroneopterin aldolase/epimerase domain CF65_00077 IPR023346 Lysozyme-like domain superfamily CF65_00077 IPR008258 Transglycosylase SLT domain 1 CF65_00077 IPR023703 Membrane-bound lytic murein transglycosylase F CF65_00077 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CF65_00079 IPR022920 Disulphide bond formation protein DsbB CF65_00079 IPR003752 Disulphide bond formation protein DsbB/BdbC CF65_00079 IPR023380 DsbB-like superfamily CF65_00080 IPR004671 Na+/H+ antiporter NhaB CF65_00081 IPR014178 Fatty acid response transcription factor FadR CF65_00081 IPR028374 FadR, C-terminal domain CF65_00081 IPR008920 Transcription regulator FadR/GntR, C-terminal CF65_00081 IPR000524 Transcription regulator HTH, GntR CF65_00081 IPR036390 Winged helix DNA-binding domain superfamily CF65_00081 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00084 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_00084 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_00084 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00084 IPR004839 Aminotransferase, class I/classII CF65_00085 IPR034681 Isochorismate synthase MenF CF65_00085 IPR004561 Isochorismate synthase CF65_00085 IPR015890 Chorismate-utilising enzyme, C-terminal CF65_00085 IPR005801 ADC synthase CF65_00086 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CF65_00086 IPR029061 Thiamin diphosphate-binding fold CF65_00086 IPR032264 Menaquinone biosynthesis protein MenD, middle domain CF65_00086 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase CF65_00086 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CF65_00087 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase CF65_00087 IPR029058 Alpha/Beta hydrolase fold CF65_00087 IPR000073 Alpha/beta hydrolase fold-1 CF65_00088 IPR005290 Ribosomal protein S15, bacterial-type CF65_00088 IPR009068 S15/NS1, RNA-binding CF65_00088 IPR000589 Ribosomal protein S15 CF65_00089 IPR022636 S-adenosylmethionine synthetase superfamily CF65_00089 IPR002133 S-adenosylmethionine synthetase CF65_00089 IPR022628 S-adenosylmethionine synthetase, N-terminal CF65_00089 IPR022630 S-adenosylmethionine synthetase, C-terminal CF65_00089 IPR022629 S-adenosylmethionine synthetase, central domain CF65_00089 IPR022631 S-adenosylmethionine synthetase, conserved site CF65_00091 IPR035240 SprT-like, zinc ribbon domain CF65_00091 IPR006640 SprT-like CF65_00091 IPR023483 Uncharacterised protein family SprT CF65_00092 IPR004694 Hydroxy amino acid transporter CF65_00092 IPR018227 Amino acid/polyamine transporter 2 CF65_00093 IPR005130 Serine dehydratase-like, alpha subunit CF65_00093 IPR005131 Serine dehydratase beta chain CF65_00093 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CF65_00093 IPR029009 Allosteric substrate binding domain superfamily CF65_00096 IPR004550 L-asparaginase, type II CF65_00096 IPR036152 Asparaginase/glutaminase-like superfamily CF65_00096 IPR020827 Asparaginase/glutaminase, active site 1 CF65_00096 IPR006034 Asparaginase/glutaminase-like CF65_00096 IPR037152 L-asparaginase, N-terminal domain superfamily CF65_00096 IPR040919 Asparaginase/glutaminase, C-terminal CF65_00096 IPR027474 L-asparaginase, N-terminal CF65_00096 IPR027473 L-asparaginase, C-terminal CF65_00096 IPR027475 Asparaginase/glutaminase, active site 2 CF65_00099 IPR027492 Dual-specificity RNA methyltransferase RlmN CF65_00099 IPR007197 Radical SAM CF65_00099 IPR013785 Aldolase-type TIM barrel CF65_00099 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CF65_00099 IPR040072 Methyltransferase (Class A) CF65_00101 IPR019734 Tetratricopeptide repeat CF65_00101 IPR013026 Tetratricopeptide repeat-containing domain CF65_00101 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_00101 IPR013360 Pilus biogenesis/stability type IV, PilW CF65_00105 IPR001387 Cro/C1-type helix-turn-helix domain CF65_00105 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CF65_00105 IPR025194 Domain of unknown function DUF4115 CF65_00106 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CF65_00106 IPR011005 Dihydropteroate synthase-like CF65_00106 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CF65_00107 IPR006195 Aminoacyl-tRNA synthetase, class II CF65_00107 IPR015807 Histidine-tRNA ligase CF65_00107 IPR036621 Anticodon-binding domain superfamily CF65_00107 IPR004154 Anticodon-binding CF65_00107 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CF65_00107 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CF65_00107 IPR033656 Histidyl-anticodon-binding CF65_00108 IPR026039 Uncharacterised protein family UPF0070 CF65_00108 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_00108 IPR018704 Tetratricopeptide repeat-like domain CF65_00109 IPR007318 Phospholipid methyltransferase CF65_00110 IPR017788 DnaA regulatory inactivator Hda CF65_00110 IPR013317 Chromosomal replication initiator protein DnaA CF65_00110 IPR020591 Chromosomal replication control, initiator DnaA-like CF65_00110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00112 IPR006043 Xanthine/uracil/vitamin C permease CF65_00112 IPR006042 Xanthine/uracil permease CF65_00112 IPR029935 Uracil permease CF65_00113 IPR000836 Phosphoribosyltransferase domain CF65_00113 IPR029057 Phosphoribosyltransferase-like CF65_00113 IPR005765 Uracil phosphoribosyl transferase CF65_00113 IPR034332 Uracil phosphoribosyltransferase, bacterial-type CF65_00114 IPR027304 Trigger factor/SurA domain superfamily CF65_00114 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CF65_00114 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CF65_00115 IPR007370 Glutamate--cysteine ligase CF65_00115 IPR003806 ATP-grasp fold, PylC-type CF65_00115 IPR013815 ATP-grasp fold, subdomain 1 CF65_00115 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CF65_00115 IPR011761 ATP-grasp fold CF65_00115 IPR006335 Glutathione biosynthesis bifunctional protein GshAB CF65_00115 IPR040657 GshAB, ATP-grasp-like domain CF65_00115 IPR006334 Glutamate--cysteine ligase, monofunctional CF65_00116 IPR040423 Phosphoethanolamine transferase CF65_00116 IPR017850 Alkaline-phosphatase-like, core domain superfamily CF65_00116 IPR000917 Sulfatase, N-terminal CF65_00119 IPR001907 ATP-dependent Clp protease proteolytic subunit CF65_00119 IPR029045 ClpP/crotonase-like domain superfamily CF65_00119 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CF65_00119 IPR018215 ClpP, Ser active site CF65_00119 IPR033135 ClpP, histidine active site CF65_00120 IPR038366 Zinc finger, ClpX C4-type superfamily CF65_00120 IPR010603 Zinc finger, ClpX C4-type CF65_00120 IPR019489 Clp ATPase, C-terminal CF65_00120 IPR003959 ATPase, AAA-type, core CF65_00120 IPR003593 AAA+ ATPase domain CF65_00120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00120 IPR004487 Clp protease, ATP-binding subunit ClpX CF65_00126 IPR008535 Protein of unknown function DUF817 CF65_00128 IPR017969 Heavy-metal-associated, conserved site CF65_00128 IPR001757 P-type ATPase CF65_00128 IPR027256 P-type ATPase, subfamily IB CF65_00128 IPR036163 Heavy metal-associated domain superfamily CF65_00128 IPR006121 Heavy metal-associated domain, HMA CF65_00128 IPR023214 HAD superfamily CF65_00128 IPR036412 HAD-like superfamily CF65_00128 IPR008250 P-type ATPase, A domain superfamily CF65_00128 IPR023299 P-type ATPase, cytoplasmic domain N CF65_00128 IPR018303 P-type ATPase, phosphorylation site CF65_00128 IPR023298 P-type ATPase, transmembrane domain superfamily CF65_00131 IPR015358 Transcription regulator MerR, DNA binding CF65_00131 IPR000551 MerR-type HTH domain CF65_00131 IPR011789 Cu(I)-responsive transcriptional regulator CF65_00131 IPR009061 Putative DNA-binding domain superfamily CF65_00132 IPR036414 YaeB, N-terminal domain superfamily CF65_00132 IPR023370 TrmO-like, N-terminal domain CF65_00132 IPR023368 Uncharacterised protein family UPF0066, conserved site CF65_00132 IPR041369 TrmO, C-terminal CF65_00132 IPR036413 YaeB-like superfamily CF65_00132 IPR040372 YaeB-like CF65_00134 IPR000537 UbiA prenyltransferase family CF65_00134 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase CF65_00134 IPR026046 UbiA prenyltransferase domain containing protein 1 CF65_00135 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria CF65_00135 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CF65_00135 IPR010203 Regulator of ribonuclease activity A CF65_00135 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CF65_00136 IPR001898 Solute carrier family 13 CF65_00136 IPR031312 Sodium/sulphate symporter, conserved site CF65_00137 IPR006839 Ribosome-associated, YjgA CF65_00137 IPR023153 PSPTO4464-like domain superfamily CF65_00139 IPR002510 Metalloprotease TldD/PmbA CF65_00139 IPR036059 Metalloprotease TldD/PmbA superfamily CF65_00139 IPR035068 Metalloprotease TldD/PmbA, N-terminal CF65_00141 IPR000836 Phosphoribosyltransferase domain CF65_00141 IPR005904 Hypoxanthine phosphoribosyl transferase CF65_00141 IPR029057 Phosphoribosyltransferase-like CF65_00142 IPR036129 Glycerate kinase superfamily CF65_00142 IPR004381 Glycerate kinase CF65_00142 IPR018197 Glycerate kinase, restriction-enzyme-like fold CF65_00142 IPR018193 Glycerate kinase, flavodoxin-like fold CF65_00143 IPR003474 Gluconate transporter CF65_00144 IPR042070 PucR C-terminal helix-turn-helix domain superfamily CF65_00144 IPR025736 PucR C-terminal helix-turn-helix domain CF65_00144 IPR008599 Putative sugar diacid recognition CF65_00144 IPR041522 CdaR, GGDEF-like domain CF65_00145 IPR036397 Ribonuclease H superfamily CF65_00145 IPR012337 Ribonuclease H-like superfamily CF65_00145 IPR001584 Integrase, catalytic core CF65_00145 IPR038965 Transposase InsF-like CF65_00146 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CF65_00146 IPR036291 NAD(P)-binding domain superfamily CF65_00146 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CF65_00146 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CF65_00146 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CF65_00146 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CF65_00146 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CF65_00146 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CF65_00148 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CF65_00148 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_00148 IPR014014 RNA helicase, DEAD-box type, Q motif CF65_00148 IPR001650 Helicase, C-terminal CF65_00148 IPR028618 ATP-dependent RNA helicase DeaD CF65_00148 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CF65_00148 IPR011545 DEAD/DEAH box helicase domain CF65_00148 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CF65_00148 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00148 IPR034415 CsdA, RNA recognition motif CF65_00150 IPR019734 Tetratricopeptide repeat CF65_00150 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_00150 IPR013026 Tetratricopeptide repeat-containing domain CF65_00150 IPR023605 Lipoprotein NlpI CF65_00151 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CF65_00151 IPR001247 Exoribonuclease, phosphorolytic domain 1 CF65_00151 IPR022967 RNA-binding domain, S1 CF65_00151 IPR015847 Exoribonuclease, phosphorolytic domain 2 CF65_00151 IPR036345 Exoribonuclease, PH domain 2 superfamily CF65_00151 IPR004087 K Homology domain CF65_00151 IPR012340 Nucleic acid-binding, OB-fold CF65_00151 IPR036612 K Homology domain, type 1 superfamily CF65_00151 IPR012162 Polyribonucleotide nucleotidyltransferase CF65_00151 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00151 IPR027408 PNPase/RNase PH domain superfamily CF65_00151 IPR004088 K Homology domain, type 1 CF65_00151 IPR003029 S1 domain CF65_00153 IPR004375 YhcH/YjgK/YiaL family CF65_00153 IPR037012 YhcH/YjgK/YiaL superfamily CF65_00158 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CF65_00158 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CF65_00160 IPR012902 Prokaryotic N-terminal methylation site CF65_00161 IPR007831 General secretory system II, protein E, N-terminal CF65_00161 IPR001482 Type II/IV secretion system protein CF65_00161 IPR003593 AAA+ ATPase domain CF65_00161 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00161 IPR037257 General secretory system II, protein E, N-terminal superfamily CF65_00162 IPR018076 Type II secretion system F domain CF65_00162 IPR001992 Type II secretion system conserved site CF65_00162 IPR003004 GspF/PilC family CF65_00162 IPR042094 Type II secretion system F domain superfamily CF65_00164 IPR001977 Dephospho-CoA kinase CF65_00164 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00165 IPR005584 DNA gyrase inhibitor YacG CF65_00165 IPR013088 Zinc finger, NHR/GATA-type CF65_00167 IPR001463 Sodium:alanine symporter CF65_00168 IPR003489 Ribosome hibernation promoting factor/RaiA CF65_00168 IPR036567 Ribosome hibernation promotion factor-like CF65_00169 IPR035279 Protein of unknown function DUF5358 CF65_00171 IPR002197 DNA binding HTH domain, Fis-type CF65_00171 IPR005412 DNA-binding protein Fis CF65_00171 IPR009057 Homeobox-like domain superfamily CF65_00172 IPR013785 Aldolase-type TIM barrel CF65_00172 IPR018517 tRNA-dihydrouridine synthase, conserved site CF65_00172 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CF65_00172 IPR035587 DUS-like, FMN-binding domain CF65_00172 IPR032887 tRNA-dihydrouridine synthase B CF65_00172 IPR001269 tRNA-dihydrouridine synthase CF65_00172 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CF65_00174 IPR004498 Ribosomal protein L11 methyltransferase CF65_00174 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00175 IPR003812 Fido domain CF65_00175 IPR036597 Fido-like domain superfamily CF65_00176 IPR018212 Sodium/solute symporter, conserved site CF65_00176 IPR038377 Sodium/glucose symporter superfamily CF65_00176 IPR001734 Sodium/solute symporter CF65_00176 IPR011849 Sodium/pantothenate symporter CF65_00177 IPR010398 Protein of unknown function DUF997 CF65_00182 IPR005482 Biotin carboxylase, C-terminal CF65_00182 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CF65_00182 IPR011761 ATP-grasp fold CF65_00182 IPR016185 Pre-ATP-grasp domain superfamily CF65_00182 IPR013815 ATP-grasp fold, subdomain 1 CF65_00182 IPR005481 Biotin carboxylase-like, N-terminal domain CF65_00182 IPR011764 Biotin carboxylation domain CF65_00182 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CF65_00182 IPR011054 Rudiment single hybrid motif CF65_00183 IPR001249 Acetyl-CoA biotin carboxyl carrier CF65_00183 IPR001882 Biotin-binding site CF65_00183 IPR011053 Single hybrid motif CF65_00183 IPR000089 Biotin/lipoyl attachment CF65_00185 IPR036441 Dehydroquinase, class II superfamily CF65_00185 IPR018509 Dehydroquinase, class II, conserved site CF65_00185 IPR001874 Dehydroquinase, class II CF65_00186 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CF65_00186 IPR010196 o-Succinylbenzoate synthase, MenC type1 CF65_00186 IPR036849 Enolase-like, C-terminal domain superfamily CF65_00186 IPR029065 Enolase C-terminal domain-like CF65_00186 IPR029017 Enolase-like, N-terminal CF65_00189 IPR029045 ClpP/crotonase-like domain superfamily CF65_00189 IPR001753 Enoyl-CoA hydratase/isomerase CF65_00189 IPR014748 Enoyl-CoA hydratase, C-terminal CF65_00189 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB CF65_00189 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CF65_00190 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CF65_00190 IPR035990 Triosephosphate isomerase superfamily CF65_00190 IPR000652 Triosephosphate isomerase CF65_00190 IPR013785 Aldolase-type TIM barrel CF65_00190 IPR020861 Triosephosphate isomerase, active site CF65_00191 IPR016181 Acyl-CoA N-acyltransferase CF65_00191 IPR000182 GNAT domain CF65_00194 IPR006638 Elp3/MiaB/NifB CF65_00194 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN CF65_00194 IPR010723 HemN, C-terminal CF65_00194 IPR034505 Anaerobic coproporphyrinogen-III oxidase CF65_00194 IPR007197 Radical SAM CF65_00194 IPR023404 Radical SAM, alpha/beta horseshoe CF65_00195 IPR019617 Domain of unknown function DUF2489 CF65_00196 IPR007336 Der GTPase activator CF65_00198 IPR028883 tRNA-specific adenosine deaminase CF65_00198 IPR016193 Cytidine deaminase-like CF65_00198 IPR002125 Cytidine and deoxycytidylate deaminase domain CF65_00198 IPR016192 APOBEC/CMP deaminase, zinc-binding CF65_00200 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily CF65_00200 IPR020940 Thymidylate synthase, active site CF65_00200 IPR000398 Thymidylate synthase CF65_00200 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CF65_00201 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt CF65_00202 IPR002781 Transmembrane protein TauE-like CF65_00204 IPR000086 NUDIX hydrolase domain CF65_00204 IPR020084 NUDIX hydrolase, conserved site CF65_00204 IPR022927 RNA pyrophosphohydrolase RppH CF65_00204 IPR020476 NUDIX hydrolase CF65_00204 IPR015797 NUDIX hydrolase-like domain superfamily CF65_00205 IPR023064 D-ribose pyranase CF65_00205 IPR023750 RbsD-like superfamily CF65_00205 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CF65_00207 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00207 IPR017871 ABC transporter, conserved site CF65_00207 IPR015861 ABC transporter, ribose import, RbsA CF65_00207 IPR003593 AAA+ ATPase domain CF65_00207 IPR003439 ABC transporter-like CF65_00208 IPR001851 ABC transporter, permease CF65_00209 IPR025997 Periplasmic binding protein CF65_00209 IPR028082 Periplasmic binding protein-like I CF65_00212 IPR011611 Carbohydrate kinase PfkB CF65_00212 IPR011877 Ribokinase CF65_00212 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CF65_00212 IPR002139 Ribokinase/fructokinase CF65_00212 IPR029056 Ribokinase-like CF65_00213 IPR019844 Cold-shock (CSD) domain CF65_00213 IPR011129 Cold shock domain CF65_00213 IPR012156 Cold shock, CspA CF65_00213 IPR002059 Cold-shock protein, DNA-binding CF65_00213 IPR012340 Nucleic acid-binding, OB-fold CF65_00214 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00214 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CF65_00214 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CF65_00214 IPR033910 Glutamyl-tRNA synthetase CF65_00214 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CF65_00214 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CF65_00214 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_00214 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CF65_00216 IPR007577 Glycosyltransferase, DXD sugar-binding motif CF65_00216 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00218 IPR008948 L-Aspartase-like CF65_00218 IPR022761 Fumarate lyase, N-terminal CF65_00218 IPR029419 Argininosuccinate lyase, C-terminal CF65_00218 IPR000362 Fumarate lyase family CF65_00218 IPR009049 Argininosuccinate lyase CF65_00218 IPR020557 Fumarate lyase, conserved site CF65_00218 IPR024083 Fumarase/histidase, N-terminal CF65_00221 IPR036291 NAD(P)-binding domain superfamily CF65_00221 IPR014362 Glutamate dehydrogenase CF65_00221 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CF65_00221 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CF65_00221 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CF65_00221 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CF65_00221 IPR033524 Leu/Phe/Val dehydrogenases active site CF65_00223 IPR040333 Catalase, clade 3 CF65_00223 IPR020835 Catalase superfamily CF65_00223 IPR010582 Catalase immune-responsive domain CF65_00223 IPR002226 Catalase haem-binding site CF65_00223 IPR037060 Catalase core domain superfamily CF65_00223 IPR024708 Catalase active site CF65_00223 IPR011614 Catalase core domain CF65_00223 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CF65_00223 IPR018028 Catalase, mono-functional, haem-containing CF65_00229 IPR004013 PHP domain CF65_00229 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CF65_00229 IPR004805 DNA polymerase III, alpha subunit CF65_00229 IPR016195 Polymerase/histidinol phosphatase-like CF65_00229 IPR003141 Polymerase/histidinol phosphatase, N-terminal CF65_00229 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CF65_00229 IPR040982 DNA polymerase III alpha subunit finger domain CF65_00229 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CF65_00229 IPR029460 DNA polymerase, helix-hairpin-helix motif CF65_00231 IPR020845 AMP-binding, conserved site CF65_00231 IPR000873 AMP-dependent synthetase/ligase CF65_00231 IPR042099 AMP-dependent synthetase-like superfamily CF65_00234 IPR005594 YadA-like, C-terminal CF65_00234 IPR008635 Coiled stalk of trimeric autotransporter adhesin CF65_00234 IPR024973 ESPR domain CF65_00234 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_00234 IPR008640 Head domain of trimeric autotransporter adhesin CF65_00236 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic CF65_00236 IPR001150 Glycine radical domain CF65_00236 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CF65_00236 IPR005144 ATP-cone domain CF65_00241 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic CF65_00241 IPR001989 Radical-activating enzyme, conserved site CF65_00241 IPR007197 Radical SAM CF65_00241 IPR013785 Aldolase-type TIM barrel CF65_00241 IPR034457 Organic radical-activating enzymes CF65_00244 IPR018228 Deoxyribonuclease, TatD-related, conserved site CF65_00244 IPR032466 Metal-dependent hydrolase CF65_00244 IPR001130 TatD family CF65_00247 IPR029000 Cyclophilin-like domain superfamily CF65_00247 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CF65_00247 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CF65_00247 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CF65_00249 IPR015803 Cysteine-tRNA ligase CF65_00249 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CF65_00249 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CF65_00249 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00249 IPR032678 tRNA synthetases class I, catalytic domain CF65_00249 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CF65_00250 IPR013785 Aldolase-type TIM barrel CF65_00250 IPR006638 Elp3/MiaB/NifB CF65_00250 IPR031691 Lipoyl synthase, N-terminal CF65_00250 IPR007197 Radical SAM CF65_00250 IPR003698 Lipoyl synthase CF65_00251 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CF65_00251 IPR000544 Octanoyltransferase CF65_00251 IPR020605 Octanoyltransferase, conserved site CF65_00252 IPR027471 YbeD-like domain superfamily CF65_00252 IPR007454 Uncharacterised protein family UPF0250 CF65_00254 IPR012338 Beta-lactamase/transpeptidase-like CF65_00254 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CF65_00254 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CF65_00254 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CF65_00254 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CF65_00254 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CF65_00256 IPR034718 Endolytic peptidoglycan transglycosylase RlpA CF65_00256 IPR009009 RlpA-like protein, double-psi beta-barrel domain CF65_00256 IPR012997 Rare lipoprotein A CF65_00256 IPR007730 Sporulation-like domain CF65_00256 IPR036680 Sporulation-like domain superfamily CF65_00256 IPR036908 RlpA-like domain superfamily CF65_00257 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CF65_00257 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CF65_00257 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CF65_00258 IPR012338 Beta-lactamase/transpeptidase-like CF65_00258 IPR005311 Penicillin-binding protein, dimerisation domain CF65_00258 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CF65_00258 IPR001460 Penicillin-binding protein, transpeptidase CF65_00258 IPR017790 Penicillin-binding protein 2 CF65_00259 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_00259 IPR003742 RNA methyltransferase RlmH CF65_00259 IPR029028 Alpha/beta knot methyltransferases CF65_00260 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CF65_00263 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CF65_00263 IPR014014 RNA helicase, DEAD-box type, Q motif CF65_00263 IPR011545 DEAD/DEAH box helicase domain CF65_00263 IPR023554 ATP-dependent RNA helicase RhlB type CF65_00263 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_00263 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00263 IPR001650 Helicase, C-terminal CF65_00265 IPR041703 Transcription termination factor Rho, ATP binding domain CF65_00265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00265 IPR036269 Rho termination factor, N-terminal domain superfamily CF65_00265 IPR011112 Rho termination factor, N-terminal CF65_00265 IPR003593 AAA+ ATPase domain CF65_00265 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CF65_00265 IPR011129 Cold shock domain CF65_00265 IPR012340 Nucleic acid-binding, OB-fold CF65_00265 IPR004665 Transcription termination factor Rho CF65_00265 IPR011113 Rho termination factor, RNA-binding domain CF65_00266 IPR011701 Major facilitator superfamily CF65_00266 IPR020846 Major facilitator superfamily domain CF65_00266 IPR036259 MFS transporter superfamily CF65_00266 IPR005829 Sugar transporter, conserved site CF65_00268 IPR036736 ACP-like superfamily CF65_00268 IPR003231 Acyl carrier protein (ACP) CF65_00268 IPR009081 Phosphopantetheine binding ACP domain CF65_00268 IPR006162 Phosphopantetheine attachment site CF65_00269 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CF65_00269 IPR036291 NAD(P)-binding domain superfamily CF65_00269 IPR020904 Short-chain dehydrogenase/reductase, conserved site CF65_00269 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00270 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CF65_00270 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CF65_00270 IPR024925 Malonyl CoA-acyl carrier protein transacylase CF65_00270 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CF65_00270 IPR014043 Acyl transferase CF65_00270 IPR001227 Acyl transferase domain superfamily CF65_00272 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CF65_00272 IPR016039 Thiolase-like CF65_00272 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CF65_00272 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CF65_00273 IPR012281 Phospholipid biosynthesis protein, PlsX-like CF65_00273 IPR003664 Fatty acid synthesis PlsX protein CF65_00274 IPR011332 Zinc-binding ribosomal protein CF65_00274 IPR002677 Ribosomal protein L32p CF65_00275 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria CF65_00275 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CF65_00276 IPR004472 Dethiobiotin synthase BioD CF65_00276 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00277 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00277 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CF65_00277 IPR013216 Methyltransferase type 11 CF65_00278 IPR007398 Protein of unknown function DUF452 CF65_00279 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CF65_00279 IPR004839 Aminotransferase, class I/classII CF65_00279 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CF65_00279 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00279 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_00279 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_00280 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_00280 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CF65_00280 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_00280 IPR005814 Aminotransferase class-III CF65_00280 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00281 IPR003817 Phosphatidylserine decarboxylase-related CF65_00281 IPR033177 Phosphatidylserine decarboxylase CF65_00281 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 CF65_00282 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CF65_00282 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CF65_00282 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily CF65_00283 IPR036974 PUA domain superfamily CF65_00283 IPR015947 PUA-like superfamily CF65_00283 IPR002478 PUA domain CF65_00283 IPR019797 Glutamate 5-kinase, conserved site CF65_00283 IPR036393 Acetylglutamate kinase-like superfamily CF65_00283 IPR011529 Glutamate 5-kinase CF65_00283 IPR001057 Glutamate/acetylglutamate kinase CF65_00283 IPR041739 Glutamate-5-kinase domain CF65_00283 IPR001048 Aspartate/glutamate/uridylate kinase CF65_00283 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CF65_00286 IPR001048 Aspartate/glutamate/uridylate kinase CF65_00286 IPR041739 Glutamate-5-kinase domain CF65_00286 IPR036393 Acetylglutamate kinase-like superfamily CF65_00286 IPR011529 Glutamate 5-kinase CF65_00286 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CF65_00286 IPR019797 Glutamate 5-kinase, conserved site CF65_00286 IPR002478 PUA domain CF65_00286 IPR015947 PUA-like superfamily CF65_00286 IPR036974 PUA domain superfamily CF65_00286 IPR001057 Glutamate/acetylglutamate kinase CF65_00287 IPR036974 PUA domain superfamily CF65_00287 IPR002478 PUA domain CF65_00287 IPR019797 Glutamate 5-kinase, conserved site CF65_00287 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CF65_00287 IPR015947 PUA-like superfamily CF65_00287 IPR001057 Glutamate/acetylglutamate kinase CF65_00287 IPR041739 Glutamate-5-kinase domain CF65_00287 IPR001048 Aspartate/glutamate/uridylate kinase CF65_00287 IPR036393 Acetylglutamate kinase-like superfamily CF65_00287 IPR011529 Glutamate 5-kinase CF65_00288 IPR010619 Putative threonine/serine exporter CF65_00290 IPR024528 Threonine/Serine exporter, ThrE CF65_00290 IPR010619 Putative threonine/serine exporter CF65_00292 IPR024072 Dihydrofolate reductase-like domain superfamily CF65_00292 IPR017925 Dihydrofolate reductase conserved site CF65_00292 IPR012259 Dihydrofolate reductase CF65_00292 IPR001796 Dihydrofolate reductase domain CF65_00296 IPR016169 FAD-binding, type PCMH, subdomain 2 CF65_00296 IPR036318 FAD-binding, type PCMH-like superfamily CF65_00296 IPR002550 CNNM, transmembrane domain CF65_00296 IPR005170 Transporter-associated domain CF65_00296 IPR000644 CBS domain CF65_00300 IPR011088 Bacteriophage phiNM3, A0EWY4 CF65_00301 IPR018228 Deoxyribonuclease, TatD-related, conserved site CF65_00301 IPR015991 Uncharacterised hydrolase TatD-type CF65_00301 IPR032466 Metal-dependent hydrolase CF65_00301 IPR001130 TatD family CF65_00302 IPR015199 DNA polymerase III, delta subunit, C-terminal CF65_00302 IPR004622 DNA polymerase III, delta prime subunit CF65_00302 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00302 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CF65_00303 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00303 IPR039430 Thymidylate kinase-like domain CF65_00303 IPR018094 Thymidylate kinase CF65_00303 IPR018095 Thymidylate kinase, conserved site CF65_00305 IPR003770 Endolytic murein transglycosylase CF65_00306 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CF65_00306 IPR017918 Nitrogen regulatory protein PII, conserved site CF65_00306 IPR002187 Nitrogen regulatory protein PII CF65_00306 IPR002332 Nitrogen regulatory protein P-II, urydylation site CF65_00306 IPR011322 Nitrogen regulatory PII-like, alpha/beta CF65_00308 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00308 IPR036390 Winged helix DNA-binding domain superfamily CF65_00308 IPR037171 NagB/RpiA transferase-like CF65_00308 IPR001034 DeoR-type HTH domain CF65_00308 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CF65_00308 IPR014036 DeoR C-terminal sensor domain CF65_00309 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CF65_00309 IPR036291 NAD(P)-binding domain superfamily CF65_00309 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CF65_00309 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CF65_00309 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CF65_00309 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CF65_00309 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CF65_00310 IPR042213 Nucleotide-binding, C-terminal domain superfamily CF65_00310 IPR031475 Nucleotide-binding C-terminal domain CF65_00310 IPR010737 Four-carbon acid sugar kinase, N-terminal domain CF65_00310 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily CF65_00311 IPR001303 Class II aldolase/adducin N-terminal CF65_00311 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CF65_00312 IPR026040 Hydroxypyruvate isomerase-like CF65_00312 IPR036237 Xylose isomerase-like superfamily CF65_00312 IPR013022 Xylose isomerase-like, TIM barrel domain CF65_00316 IPR023214 HAD superfamily CF65_00316 IPR036412 HAD-like superfamily CF65_00316 IPR006379 HAD-superfamily hydrolase, subfamily IIB CF65_00316 IPR000150 Cof family CF65_00317 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00317 IPR007860 DNA mismatch repair protein MutS, connector domain CF65_00317 IPR005748 DNA mismatch repair protein MutS CF65_00317 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CF65_00317 IPR017261 DNA mismatch repair protein MutS/MSH CF65_00317 IPR000432 DNA mismatch repair protein MutS, C-terminal CF65_00317 IPR007861 DNA mismatch repair protein MutS, clamp CF65_00317 IPR007696 DNA mismatch repair protein MutS, core CF65_00317 IPR016151 DNA mismatch repair protein MutS, N-terminal CF65_00317 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CF65_00317 IPR036678 MutS, connector domain superfamily CF65_00323 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00323 IPR007536 Ribosomal RNA small subunit methyltransferase J CF65_00324 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00324 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA CF65_00324 IPR010280 (Uracil-5)-methyltransferase family CF65_00324 IPR030390 RNA methyltransferase TrmA, active site CF65_00324 IPR030391 RNA methyltransferase TrmA, conserved site CF65_00325 IPR007335 Protein of unknown function DUF413 CF65_00326 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CF65_00326 IPR001853 DSBA-like thioredoxin domain CF65_00326 IPR036249 Thioredoxin-like superfamily CF65_00326 IPR017937 Thioredoxin, conserved site CF65_00326 IPR013766 Thioredoxin domain CF65_00327 IPR009383 Protein of unknown function DUF1040 CF65_00327 IPR038134 YihD-like superfamily CF65_00329 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00329 IPR013482 Molybdenum cofactor guanylyltransferase CF65_00329 IPR025877 MobA-like NTP transferase CF65_00332 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CF65_00332 IPR016258 Multiphosphoryl transfer protein FruB CF65_00332 IPR000032 Phosphocarrier protein HPr-like CF65_00332 IPR035895 HPr-like superfamily CF65_00332 IPR016152 Phosphotransferase/anion transporter CF65_00332 IPR002178 PTS EIIA type-2 domain CF65_00332 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CF65_00333 IPR017583 Tagatose/fructose phosphokinase CF65_00333 IPR029056 Ribokinase-like CF65_00333 IPR022463 Fructose 1-phosphate kinase CF65_00333 IPR011611 Carbohydrate kinase PfkB CF65_00333 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CF65_00335 IPR006327 Phosphotransferase system, fructose IIC component CF65_00335 IPR013011 Phosphotransferase system, EIIB component, type 2 CF65_00335 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CF65_00335 IPR036095 PTS system IIB component-like superfamily CF65_00335 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CF65_00335 IPR013014 Phosphotransferase system, EIIC component, type 2 CF65_00340 IPR029039 Flavoprotein-like superfamily CF65_00340 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF CF65_00340 IPR003680 Flavodoxin-like fold CF65_00344 IPR005807 SecE subunit of protein translocation complex, bacterial-like CF65_00344 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CF65_00344 IPR038379 SecE superfamily CF65_00345 IPR005824 KOW CF65_00345 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CF65_00345 IPR001062 Transcription antitermination protein, NusG CF65_00345 IPR014722 Ribosomal protein L2, domain 2 CF65_00345 IPR036735 NusG, N-terminal domain superfamily CF65_00345 IPR008991 Translation protein SH3-like domain superfamily CF65_00345 IPR006645 NusG, N-terminal CF65_00347 IPR020784 Ribosomal protein L11, N-terminal CF65_00347 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CF65_00347 IPR020783 Ribosomal protein L11, C-terminal CF65_00347 IPR006519 Ribosomal protein L11, bacterial-type CF65_00347 IPR000911 Ribosomal protein L11/L12 CF65_00347 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CF65_00348 IPR005878 Ribosomal protein L1, bacterial-type CF65_00348 IPR023674 Ribosomal protein L1-like CF65_00348 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CF65_00348 IPR002143 Ribosomal protein L1 CF65_00348 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CF65_00348 IPR023673 Ribosomal protein L1, conserved site CF65_00350 IPR001790 Ribosomal protein L10P CF65_00350 IPR002363 Ribosomal protein L10, eubacterial, conserved site CF65_00350 IPR022973 Ribosomal protein L10 CF65_00355 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CF65_00355 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CF65_00355 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CF65_00355 IPR007121 RNA polymerase, beta subunit, conserved site CF65_00355 IPR014724 RNA polymerase Rpb2, OB-fold CF65_00355 IPR007644 RNA polymerase, beta subunit, protrusion CF65_00355 IPR007642 RNA polymerase Rpb2, domain 2 CF65_00355 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CF65_00355 IPR007641 RNA polymerase Rpb2, domain 7 CF65_00355 IPR007645 RNA polymerase Rpb2, domain 3 CF65_00355 IPR015712 DNA-directed RNA polymerase, subunit 2 CF65_00355 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CF65_00356 IPR006592 RNA polymerase, N-terminal CF65_00356 IPR007080 RNA polymerase Rpb1, domain 1 CF65_00356 IPR007081 RNA polymerase Rpb1, domain 5 CF65_00356 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CF65_00356 IPR007083 RNA polymerase Rpb1, domain 4 CF65_00356 IPR000722 RNA polymerase, alpha subunit CF65_00356 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CF65_00356 IPR007066 RNA polymerase Rpb1, domain 3 CF65_00356 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CF65_00357 IPR002686 Transposase IS200-like CF65_00357 IPR036515 Transposase IS200-like superfamily CF65_00358 IPR012340 Nucleic acid-binding, OB-fold CF65_00358 IPR019984 30S ribosomal protein S17 CF65_00358 IPR000266 Ribosomal protein S17/S11 CF65_00358 IPR019979 Ribosomal protein S17, conserved site CF65_00359 IPR036049 Ribosomal protein L29/L35 superfamily CF65_00359 IPR018254 Ribosomal protein L29, conserved site CF65_00359 IPR001854 Ribosomal protein L29/L35 CF65_00361 IPR016180 Ribosomal protein L10e/L16 CF65_00361 IPR036920 Ribosomal protein L10e/L16 superfamily CF65_00361 IPR020798 Ribosomal protein L16, conserved site CF65_00361 IPR000114 Ribosomal protein L16 CF65_00362 IPR005704 Ribosomal protein S3, bacterial-type CF65_00362 IPR009019 K homology domain superfamily, prokaryotic type CF65_00362 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CF65_00362 IPR004044 K Homology domain, type 2 CF65_00362 IPR015946 K homology domain-like, alpha/beta CF65_00362 IPR004087 K Homology domain CF65_00362 IPR018280 Ribosomal protein S3, conserved site CF65_00362 IPR001351 Ribosomal protein S3, C-terminal CF65_00363 IPR001063 Ribosomal protein L22/L17 CF65_00363 IPR018260 Ribosomal protein L22/L17, conserved site CF65_00363 IPR036394 Ribosomal protein L22/L17 superfamily CF65_00363 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CF65_00365 IPR002222 Ribosomal protein S19/S15 CF65_00365 IPR005732 Ribosomal protein S19, bacterial-type CF65_00365 IPR023575 Ribosomal protein S19, superfamily CF65_00365 IPR020934 Ribosomal protein S19 conserved site CF65_00366 IPR014726 Ribosomal protein L2, domain 3 CF65_00366 IPR022671 Ribosomal protein L2, conserved site CF65_00366 IPR022669 Ribosomal protein L2, C-terminal CF65_00366 IPR005880 Ribosomal protein L2, bacterial/organellar-type CF65_00366 IPR002171 Ribosomal protein L2 CF65_00366 IPR014722 Ribosomal protein L2, domain 2 CF65_00366 IPR008991 Translation protein SH3-like domain superfamily CF65_00366 IPR012340 Nucleic acid-binding, OB-fold CF65_00366 IPR022666 Ribosomal Proteins L2, RNA binding domain CF65_00367 IPR012678 Ribosomal protein L23/L15e core domain superfamily CF65_00367 IPR001014 Ribosomal protein L23/L25, conserved site CF65_00367 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CF65_00367 IPR013025 Ribosomal protein L25/L23 CF65_00368 IPR023574 Ribosomal protein L4 domain superfamily CF65_00368 IPR013005 50S ribosomal protein uL4 CF65_00368 IPR002136 Ribosomal protein L4/L1e CF65_00369 IPR019927 Ribosomal protein L3, bacterial/organelle-type CF65_00369 IPR019926 Ribosomal protein L3, conserved site CF65_00369 IPR000597 Ribosomal protein L3 CF65_00369 IPR009000 Translation protein, beta-barrel domain superfamily CF65_00370 IPR027486 Ribosomal protein S10 domain CF65_00370 IPR036838 Ribosomal protein S10 domain superfamily CF65_00370 IPR018268 Ribosomal protein S10, conserved site CF65_00370 IPR001848 Ribosomal protein S10 CF65_00371 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00371 IPR036390 Winged helix DNA-binding domain superfamily CF65_00371 IPR005119 LysR, substrate-binding CF65_00371 IPR000847 Transcription regulator HTH, LysR CF65_00372 IPR012792 3-oxoacid CoA-transferase, subunit A CF65_00372 IPR004165 Coenzyme A transferase family I CF65_00372 IPR004163 Coenzyme A transferase binding site CF65_00372 IPR037171 NagB/RpiA transferase-like CF65_00373 IPR004164 Coenzyme A transferase active site CF65_00373 IPR004165 Coenzyme A transferase family I CF65_00373 IPR037171 NagB/RpiA transferase-like CF65_00373 IPR012791 3-oxoacid CoA-transferase, subunit B CF65_00374 IPR006161 Conserved hypothetical protein CHP00336 CF65_00374 IPR006160 Short chain fatty acid transporter AtoE CF65_00377 IPR020615 Thiolase, acyl-enzyme intermediate active site CF65_00377 IPR016039 Thiolase-like CF65_00377 IPR020613 Thiolase, conserved site CF65_00377 IPR002155 Thiolase CF65_00377 IPR020616 Thiolase, N-terminal CF65_00377 IPR020610 Thiolase, active site CF65_00377 IPR020617 Thiolase, C-terminal CF65_00378 IPR011008 Dimeric alpha-beta barrel CF65_00378 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00378 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CF65_00378 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CF65_00378 IPR036390 Winged helix DNA-binding domain superfamily CF65_00378 IPR011991 ArsR-like helix-turn-helix domain CF65_00378 IPR000485 AsnC-type HTH domain CF65_00378 IPR019888 Transcription regulator AsnC-type CF65_00379 IPR018385 C4-dicarboxylate anaerobic carrier-like CF65_00380 IPR001048 Aspartate/glutamate/uridylate kinase CF65_00380 IPR003964 Carbamate kinase CF65_00380 IPR036393 Acetylglutamate kinase-like superfamily CF65_00381 IPR024904 Ornithine carbamoyltransferase CF65_00381 IPR002292 Ornithine/putrescine carbamoyltransferase CF65_00381 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CF65_00381 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CF65_00381 IPR006130 Aspartate/ornithine carbamoyltransferase CF65_00381 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CF65_00383 IPR014743 Chloride channel, core CF65_00383 IPR001807 Chloride channel, voltage gated CF65_00384 IPR004653 tRNA-dihydrouridine(20/20a) synthase CF65_00384 IPR035587 DUS-like, FMN-binding domain CF65_00384 IPR013785 Aldolase-type TIM barrel CF65_00384 IPR001269 tRNA-dihydrouridine synthase CF65_00384 IPR018517 tRNA-dihydrouridine synthase, conserved site CF65_00386 IPR006195 Aminoacyl-tRNA synthetase, class II CF65_00386 IPR004618 Aspartate--ammonia ligase CF65_00387 IPR011008 Dimeric alpha-beta barrel CF65_00387 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00387 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CF65_00387 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CF65_00387 IPR019888 Transcription regulator AsnC-type CF65_00387 IPR000485 AsnC-type HTH domain CF65_00387 IPR011991 ArsR-like helix-turn-helix domain CF65_00387 IPR036390 Winged helix DNA-binding domain superfamily CF65_00388 IPR018016 Nucleoside phosphorylase, conserved site CF65_00388 IPR000845 Nucleoside phosphorylase domain CF65_00388 IPR035994 Nucleoside phosphorylase superfamily CF65_00388 IPR010058 Uridine phosphorylase CF65_00390 IPR002549 Transmembrane protein TqsA-like CF65_00391 IPR006659 Arsenate reductase CF65_00391 IPR006660 Arsenate reductase-like CF65_00391 IPR036249 Thioredoxin-like superfamily CF65_00395 IPR035318 Protein of unknown function DUF5377 CF65_00396 IPR005589 Alternative ribosome-rescue factor A CF65_00397 IPR006638 Elp3/MiaB/NifB CF65_00397 IPR041582 RimO, TRAM domain CF65_00397 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CF65_00397 IPR038135 Methylthiotransferase, N-terminal domain superfamily CF65_00397 IPR007197 Radical SAM CF65_00397 IPR023404 Radical SAM, alpha/beta horseshoe CF65_00397 IPR020612 Methylthiotransferase, conserved site CF65_00397 IPR005839 Methylthiotransferase CF65_00397 IPR013848 Methylthiotransferase, N-terminal CF65_00397 IPR002792 TRAM domain CF65_00398 IPR023485 Phosphotyrosine protein phosphatase I CF65_00398 IPR017867 Protein-tyrosine phosphatase, low molecular weight CF65_00398 IPR036196 Phosphotyrosine protein phosphatase I superfamily CF65_00399 IPR038444 DUF465 superfamily CF65_00399 IPR007420 Protein of unknown function DUF465 CF65_00401 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CF65_00404 IPR009671 Regulator of ribonuclease activity B domain CF65_00404 IPR036701 RraB-like superfamily CF65_00404 IPR016716 Regulator of ribonuclease activity B CF65_00406 IPR001185 Large-conductance mechanosensitive channel CF65_00406 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CF65_00406 IPR019823 Large-conductance mechanosensitive channel, conserved site CF65_00406 IPR036019 Gated mechanosensitive channel CF65_00407 IPR003148 Regulator of K+ conductance, N-terminal CF65_00407 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CF65_00407 IPR006037 Regulator of K+ conductance, C-terminal CF65_00407 IPR036291 NAD(P)-binding domain superfamily CF65_00407 IPR006036 Potassium uptake protein TrkA CF65_00408 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00408 IPR004573 rRNA small subunit methyltransferase B CF65_00408 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CF65_00408 IPR023267 RNA (C5-cytosine) methyltransferase CF65_00408 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CF65_00408 IPR006027 NusB/RsmB/TIM44 CF65_00408 IPR035926 NusB-like superfamily CF65_00409 IPR005793 Formyl transferase, C-terminal CF65_00409 IPR037022 Formyl transferase, C-terminal domain superfamily CF65_00409 IPR002376 Formyl transferase, N-terminal CF65_00409 IPR036477 Formyl transferase, N-terminal domain superfamily CF65_00409 IPR011034 Formyl transferase-like, C-terminal domain superfamily CF65_00409 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CF65_00409 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CF65_00409 IPR005794 Methionyl-tRNA formyltransferase CF65_00410 IPR023635 Peptide deformylase CF65_00410 IPR036821 Peptide deformylase superfamily CF65_00414 IPR036412 HAD-like superfamily CF65_00414 IPR006543 Histidinol-phosphate phosphatase CF65_00414 IPR023214 HAD superfamily CF65_00414 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase CF65_00414 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CF65_00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00415 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CF65_00415 IPR017871 ABC transporter, conserved site CF65_00415 IPR003439 ABC transporter-like CF65_00415 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria CF65_00415 IPR026253 Methionine import ATP-binding protein MetN CF65_00415 IPR003593 AAA+ ATPase domain CF65_00415 IPR018449 NIL domain CF65_00415 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CF65_00416 IPR035906 MetI-like superfamily CF65_00416 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_00417 IPR004872 Lipoprotein NlpA family CF65_00420 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_00420 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CF65_00420 IPR029028 Alpha/beta knot methyltransferases CF65_00420 IPR001537 tRNA/rRNA methyltransferase, SpoU type CF65_00422 IPR007488 Protein of unknown function DUF535 CF65_00423 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CF65_00423 IPR030393 EngB-type guanine nucleotide-binding (G) domain CF65_00423 IPR006073 GTP binding domain CF65_00423 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00425 IPR000523 Magnesium chelatase ChlI domain CF65_00425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00425 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00425 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00425 IPR003593 AAA+ ATPase domain CF65_00425 IPR001208 MCM domain CF65_00425 IPR004482 Mg chelatase-related protein CF65_00425 IPR025158 Mg chelatase-related protein, C-terminal domain CF65_00426 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00426 IPR001208 MCM domain CF65_00426 IPR004482 Mg chelatase-related protein CF65_00426 IPR025158 Mg chelatase-related protein, C-terminal domain CF65_00426 IPR003593 AAA+ ATPase domain CF65_00426 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00426 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00426 IPR000523 Magnesium chelatase ChlI domain CF65_00434 IPR037026 Vgr protein, OB-fold domain superfamily CF65_00434 IPR006531 Gp5 N-terminal CF65_00434 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CF65_00434 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CF65_00446 IPR001584 Integrase, catalytic core CF65_00446 IPR036397 Ribonuclease H superfamily CF65_00446 IPR012337 Ribonuclease H-like superfamily CF65_00448 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00448 IPR025158 Mg chelatase-related protein, C-terminal domain CF65_00448 IPR004482 Mg chelatase-related protein CF65_00448 IPR001208 MCM domain CF65_00448 IPR003593 AAA+ ATPase domain CF65_00448 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00448 IPR000523 Magnesium chelatase ChlI domain CF65_00448 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00449 IPR006837 Divergent polysaccharide deacetylase CF65_00449 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CF65_00450 IPR011055 Duplicated hybrid motif CF65_00450 IPR016047 Peptidase M23 CF65_00452 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CF65_00452 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CF65_00452 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CF65_00452 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CF65_00452 IPR005843 Alpha-D-phosphohexomutase, C-terminal CF65_00452 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CF65_00452 IPR005841 Alpha-D-phosphohexomutase superfamily CF65_00452 IPR016066 Alpha-D-phosphohexomutase, conserved site CF65_00453 IPR005952 Phosphoglycerate mutase 1 CF65_00453 IPR029033 Histidine phosphatase superfamily CF65_00453 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_00454 IPR005587 Uncharacterised protein family UPF0304, YfbU CF65_00454 IPR023146 YfbU, alpha-helical bundle domain superfamily CF65_00454 IPR023145 YfbU, helix-hairpin domain superfamily CF65_00455 IPR007428 MlaA lipoprotein CF65_00458 IPR011980 Nickel ABC transporter, substrate-binding protein NikA CF65_00458 IPR023765 Solute-binding protein family 5, conserved site CF65_00458 IPR039424 Solute-binding protein family 5 CF65_00458 IPR030678 Peptide/nickel binding protein, MppA-type CF65_00458 IPR000914 Solute-binding protein family 5 domain CF65_00460 IPR003593 AAA+ ATPase domain CF65_00460 IPR019489 Clp ATPase, C-terminal CF65_00460 IPR004491 Heat shock protein HslU CF65_00460 IPR003959 ATPase, AAA-type, core CF65_00460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00461 IPR022281 ATP-dependent protease, HslV subunit CF65_00461 IPR023333 Proteasome B-type subunit CF65_00461 IPR001353 Proteasome, subunit alpha/beta CF65_00461 IPR029055 Nucleophile aminohydrolases, N-terminal CF65_00463 IPR023214 HAD superfamily CF65_00463 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA CF65_00463 IPR036412 HAD-like superfamily CF65_00463 IPR005519 Acid phosphatase, class B-like CF65_00468 IPR018227 Amino acid/polyamine transporter 2 CF65_00468 IPR013059 Tryptophan/tyrosine transporter CF65_00468 IPR013061 Tryptophan/tryrosine permease, conserved site CF65_00469 IPR036649 Inorganic pyrophosphatase superfamily CF65_00469 IPR008162 Inorganic pyrophosphatase CF65_00470 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_00470 IPR030873 Beta-barrel assembly-enhancing protease CF65_00470 IPR001915 Peptidase M48 CF65_00471 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CF65_00471 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CF65_00473 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_00473 IPR024109 Tryptophan-tRNA ligase, bacterial-type CF65_00473 IPR002305 Aminoacyl-tRNA synthetase, class Ic CF65_00473 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00473 IPR002306 Tryptophan-tRNA ligase CF65_00474 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CF65_00474 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CF65_00474 IPR036225 SRP/SRP receptor, N-terminal CF65_00474 IPR004390 Signal-recognition particle receptor FtsY CF65_00474 IPR013822 Signal recognition particle SRP54, helical bundle CF65_00474 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00474 IPR003593 AAA+ ATPase domain CF65_00475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00475 IPR004398 RNA methyltransferase, RsmD CF65_00475 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_00478 IPR013789 Phosphotransferase system, mannose family IIA component CF65_00478 IPR004701 Phosphotransferase system, mannose-type IIA component CF65_00478 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CF65_00478 IPR033887 PTS system mannose/sorbose specific IIA subunit CF65_00478 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CF65_00478 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily CF65_00478 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CF65_00479 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit CF65_00480 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CF65_00482 IPR000150 Cof family CF65_00482 IPR036412 HAD-like superfamily CF65_00482 IPR023214 HAD superfamily CF65_00482 IPR006379 HAD-superfamily hydrolase, subfamily IIB CF65_00486 IPR008276 Concentrative nucleoside transporter CF65_00486 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CF65_00486 IPR011657 Concentrative nucleoside transporter C-terminal domain CF65_00486 IPR002668 Concentrative nucleoside transporter N-terminal domain CF65_00486 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CF65_00488 IPR018016 Nucleoside phosphorylase, conserved site CF65_00488 IPR004402 Purine nucleoside phosphorylase DeoD-type CF65_00488 IPR000845 Nucleoside phosphorylase domain CF65_00488 IPR035994 Nucleoside phosphorylase superfamily CF65_00491 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CF65_00491 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB CF65_00491 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal CF65_00491 IPR002509 NodB homology domain CF65_00492 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA CF65_00492 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00492 IPR001173 Glycosyltransferase 2-like CF65_00497 IPR000849 Sugar phosphate transporter CF65_00497 IPR021159 Glycerate/sugar phosphate transporter, conserved site CF65_00497 IPR036259 MFS transporter superfamily CF65_00497 IPR020846 Major facilitator superfamily domain CF65_00497 IPR011701 Major facilitator superfamily CF65_00499 IPR012349 FMN-binding split barrel CF65_00499 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal CF65_00499 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative CF65_00499 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site CF65_00499 IPR000659 Pyridoxamine 5'-phosphate oxidase CF65_00506 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CF65_00506 IPR001650 Helicase, C-terminal CF65_00506 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_00506 IPR028621 ATP-dependent RNA helicase SrmB CF65_00506 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00506 IPR011545 DEAD/DEAH box helicase domain CF65_00506 IPR014014 RNA helicase, DEAD-box type, Q motif CF65_00508 IPR007848 Methyltransferase small domain CF65_00508 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00508 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase CF65_00508 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_00511 IPR006419 Nicotinamide mononucleotide transporter PnuC CF65_00512 IPR006419 Nicotinamide mononucleotide transporter PnuC CF65_00513 IPR006145 Pseudouridine synthase, RsuA/RluA CF65_00513 IPR020103 Pseudouridine synthase, catalytic domain superfamily CF65_00513 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CF65_00516 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily CF65_00516 IPR003815 S-ribosylhomocysteinase (LuxS) CF65_00516 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CF65_00519 IPR001451 Hexapeptide repeat CF65_00519 IPR018357 Hexapeptide transferase, conserved site CF65_00519 IPR039369 Galactoside O-acetyltransferase LacA-like CF65_00519 IPR024688 Maltose/galactoside acetyltransferase CF65_00519 IPR011004 Trimeric LpxA-like superfamily CF65_00521 IPR036412 HAD-like superfamily CF65_00521 IPR010976 Beta-phosphoglucomutase hydrolase CF65_00521 IPR041492 Haloacid dehalogenase-like hydrolase CF65_00521 IPR023214 HAD superfamily CF65_00521 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CF65_00521 IPR006439 HAD hydrolase, subfamily IA CF65_00523 IPR011608 PRD domain CF65_00523 IPR036634 PRD domain superfamily CF65_00527 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00527 IPR014016 UvrD-like helicase, ATP-binding domain CF65_00527 IPR000212 DNA helicase, UvrD/REP type CF65_00527 IPR014017 UvrD-like DNA helicase, C-terminal CF65_00527 IPR013986 DExx box DNA helicase domain superfamily CF65_00527 IPR034739 UvrD/AddA helicase, N-terminal CF65_00527 IPR005752 ATP-dependent DNA helicase Rep CF65_00528 IPR010780 Protein of unknown function DUF1375 CF65_00531 IPR036397 Ribonuclease H superfamily CF65_00531 IPR029060 PIN-like domain superfamily CF65_00531 IPR018320 DNA polymerase 1 CF65_00531 IPR001098 DNA-directed DNA polymerase, family A, palm domain CF65_00531 IPR019760 DNA-directed DNA polymerase, family A, conserved site CF65_00531 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CF65_00531 IPR012337 Ribonuclease H-like superfamily CF65_00531 IPR002562 3'-5' exonuclease domain CF65_00531 IPR008918 Helix-hairpin-helix motif, class 2 CF65_00531 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CF65_00531 IPR002421 5'-3' exonuclease, N-terminal CF65_00531 IPR002298 DNA polymerase A CF65_00531 IPR020045 DNA polymerase I-like, H3TH domain CF65_00536 IPR008334 5'-Nucleotidase, C-terminal CF65_00536 IPR006146 5'-Nucleotidase, conserved site CF65_00536 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN CF65_00536 IPR029052 Metallo-dependent phosphatase-like CF65_00536 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CF65_00536 IPR006179 5'-Nucleotidase/apyrase CF65_00536 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CF65_00539 IPR001509 NAD-dependent epimerase/dehydratase CF65_00539 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase CF65_00539 IPR036291 NAD(P)-binding domain superfamily CF65_00543 IPR011910 ADP-heptose--LPS heptosyltransferase 2 CF65_00543 IPR002201 Glycosyl transferase, family 9 CF65_00544 IPR016185 Pre-ATP-grasp domain superfamily CF65_00544 IPR007921 CHAP domain CF65_00544 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CF65_00544 IPR038765 Papain-like cysteine peptidase superfamily CF65_00545 IPR016185 Pre-ATP-grasp domain superfamily CF65_00545 IPR038765 Papain-like cysteine peptidase superfamily CF65_00545 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CF65_00545 IPR007921 CHAP domain CF65_00546 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT CF65_00546 IPR038266 NapC/NirT cytochrome c superfamily CF65_00546 IPR005126 NapC/NirT cytochrome c, N-terminal CF65_00546 IPR024717 Denitrification system component NapC/NirT/NrfH CF65_00546 IPR036280 Multiheme cytochrome superfamily CF65_00546 IPR011031 Multihaem cytochrome CF65_00547 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CF65_00547 IPR036280 Multiheme cytochrome superfamily CF65_00547 IPR011031 Multihaem cytochrome CF65_00549 IPR011886 Ferredoxin-type protein, NapH/MauN family CF65_00549 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_00549 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00550 IPR004494 MauM/NapG ferredoxin-type protein CF65_00550 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CF65_00550 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_00550 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00552 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CF65_00552 IPR010051 Periplasmic nitrate reductase, large subunit CF65_00552 IPR006311 Twin-arginine translocation pathway, signal sequence CF65_00552 IPR009010 Aspartate decarboxylase-like domain superfamily CF65_00552 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CF65_00552 IPR006657 Molybdopterin dinucleotide-binding domain CF65_00552 IPR006656 Molybdopterin oxidoreductase CF65_00552 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CF65_00552 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain CF65_00553 IPR005623 Chaperone NapD, nitrate reductase assembly CF65_00557 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00557 IPR003660 HAMP domain CF65_00557 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00557 IPR029095 NarX-like, N-terminal CF65_00557 IPR042295 NarX-like, N-terminal domain superfamily CF65_00557 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing CF65_00557 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CF65_00557 IPR005467 Histidine kinase domain CF65_00558 IPR006094 FAD linked oxidase, N-terminal CF65_00558 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CF65_00558 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CF65_00558 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CF65_00558 IPR016169 FAD-binding, type PCMH, subdomain 2 CF65_00558 IPR016167 FAD-binding, type PCMH, subdomain 1 CF65_00558 IPR016166 FAD-binding domain, PCMH-type CF65_00558 IPR036318 FAD-binding, type PCMH-like superfamily CF65_00560 IPR009042 RNA polymerase sigma-70 region 1.2 CF65_00560 IPR014284 RNA polymerase sigma-70 like domain CF65_00560 IPR000943 RNA polymerase sigma-70 CF65_00560 IPR013325 RNA polymerase sigma factor, region 2 CF65_00560 IPR013324 RNA polymerase sigma factor, region 3/4-like CF65_00560 IPR007630 RNA polymerase sigma-70 region 4 CF65_00560 IPR007627 RNA polymerase sigma-70 region 2 CF65_00560 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria CF65_00561 IPR026256 Transcriptional regulator, TfoX/Sxy-type CF65_00561 IPR007077 TfoX, C-terminal CF65_00561 IPR007076 TfoX, N-terminal CF65_00563 IPR000795 Transcription factor, GTP-binding domain CF65_00563 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CF65_00563 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CF65_00563 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CF65_00563 IPR004161 Translation elongation factor EFTu-like, domain 2 CF65_00563 IPR033720 Elongation factor Tu, domain 2 CF65_00563 IPR031157 Tr-type G domain, conserved site CF65_00563 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00563 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CF65_00563 IPR009000 Translation protein, beta-barrel domain superfamily CF65_00563 IPR005225 Small GTP-binding protein domain CF65_00564 IPR004161 Translation elongation factor EFTu-like, domain 2 CF65_00564 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00564 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00564 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00564 IPR031157 Tr-type G domain, conserved site CF65_00564 IPR005225 Small GTP-binding protein domain CF65_00564 IPR000795 Transcription factor, GTP-binding domain CF65_00564 IPR009000 Translation protein, beta-barrel domain superfamily CF65_00564 IPR005517 Translation elongation factor EFG/EF2, domain IV CF65_00564 IPR004540 Translation elongation factor EFG/EF2 CF65_00564 IPR041095 Elongation Factor G, domain II CF65_00564 IPR009022 Elongation factor G, domain III CF65_00564 IPR035649 EFG, domain V CF65_00564 IPR000640 Elongation factor EFG, domain V-like CF65_00564 IPR035647 EF-G domain III/V-like CF65_00565 IPR005717 Ribosomal protein S7, bacterial/organellar-type CF65_00565 IPR023798 Ribosomal protein S7 domain CF65_00565 IPR036823 Ribosomal protein S7 domain superfamily CF65_00565 IPR000235 Ribosomal protein S5/S7 CF65_00565 IPR020606 Ribosomal protein S7, conserved site CF65_00566 IPR012340 Nucleic acid-binding, OB-fold CF65_00566 IPR005679 Ribosomal protein S12, bacterial-type CF65_00566 IPR006032 Ribosomal protein S12/S23 CF65_00569 IPR036291 NAD(P)-binding domain superfamily CF65_00569 IPR013116 Ketol-acid reductoisomerase, N-terminal CF65_00569 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CF65_00569 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CF65_00569 IPR013023 Ketol-acid reductoisomerase CF65_00569 IPR000506 Ketol-acid reductoisomerase, C-terminal CF65_00573 IPR000620 EamA domain CF65_00573 IPR004626 RarD protein CF65_00575 IPR011342 Shikimate dehydrogenase CF65_00575 IPR022893 Shikimate dehydrogenase family CF65_00575 IPR041121 SDH, C-terminal CF65_00575 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CF65_00575 IPR036291 NAD(P)-binding domain superfamily CF65_00575 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CF65_00576 IPR006070 YrdC-like domain CF65_00576 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CF65_00576 IPR023535 Threonylcarbamoyl-AMP synthase CF65_00578 IPR013498 DNA topoisomerase, type IA, zn finger CF65_00578 IPR000380 DNA topoisomerase, type IA CF65_00579 IPR003798 DNA recombination RmuC CF65_00580 IPR020761 Uncharacterised protein family UPF0114, bacteria CF65_00580 IPR005134 Uncharacterised protein family UPF0114 CF65_00581 IPR023695 Thiosulfate sulfurtransferase, bacterial CF65_00581 IPR001763 Rhodanese-like domain CF65_00581 IPR036873 Rhodanese-like domain superfamily CF65_00582 IPR035333 Protein of unknown function DUF5389 CF65_00583 IPR035952 Rhomboid-like superfamily CF65_00583 IPR022764 Peptidase S54, rhomboid domain CF65_00585 IPR001034 DeoR-type HTH domain CF65_00585 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CF65_00585 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00585 IPR036390 Winged helix DNA-binding domain superfamily CF65_00585 IPR037171 NagB/RpiA transferase-like CF65_00585 IPR014036 DeoR C-terminal sensor domain CF65_00586 IPR014036 DeoR C-terminal sensor domain CF65_00586 IPR001034 DeoR-type HTH domain CF65_00586 IPR037171 NagB/RpiA transferase-like CF65_00586 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CF65_00586 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00586 IPR036390 Winged helix DNA-binding domain superfamily CF65_00590 IPR010917 TonB-dependent receptor, conserved site CF65_00590 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_00590 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_00590 IPR039426 Vitamin B12 transporter BtuB-like CF65_00590 IPR012910 TonB-dependent receptor, plug domain CF65_00591 IPR017871 ABC transporter, conserved site CF65_00591 IPR003593 AAA+ ATPase domain CF65_00591 IPR011527 ABC transporter type 1, transmembrane domain CF65_00591 IPR036640 ABC transporter type 1, transmembrane domain superfamily CF65_00591 IPR003439 ABC transporter-like CF65_00591 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00592 IPR006037 Regulator of K+ conductance, C-terminal CF65_00592 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CF65_00592 IPR023018 Transport protein YidE, putative CF65_00592 IPR006512 YidE/YbjL duplication CF65_00596 IPR011817 Uridylate kinase CF65_00596 IPR001048 Aspartate/glutamate/uridylate kinase CF65_00596 IPR015963 Uridylate kinase, bacteria CF65_00596 IPR036393 Acetylglutamate kinase-like superfamily CF65_00600 IPR036191 RRF superfamily CF65_00600 IPR023584 Ribosome recycling factor domain CF65_00600 IPR002661 Ribosome recycling factor CF65_00602 IPR036291 NAD(P)-binding domain superfamily CF65_00602 IPR036169 DXP reductoisomerase, C-terminal domain superfamily CF65_00602 IPR026877 DXP reductoisomerase C-terminal domain CF65_00602 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CF65_00602 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CF65_00602 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CF65_00603 IPR001441 Decaprenyl diphosphate synthase-like CF65_00603 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CF65_00603 IPR036424 Decaprenyl diphosphate synthase-like superfamily CF65_00605 IPR000374 Phosphatidate cytidylyltransferase CF65_00606 IPR036034 PDZ superfamily CF65_00606 IPR008915 Peptidase M50 CF65_00606 IPR001478 PDZ domain CF65_00606 IPR041489 PDZ domain 6 CF65_00606 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CF65_00608 IPR023707 Outer membrane protein assembly factor BamA CF65_00608 IPR034746 POTRA domain CF65_00608 IPR039910 Surface antigen D15-like CF65_00608 IPR010827 POTRA domain, BamA/TamA-like CF65_00608 IPR000184 Bacterial surface antigen (D15) CF65_00609 IPR005632 Chaperone protein Skp CF65_00609 IPR024930 Skp domain superfamily CF65_00610 IPR001451 Hexapeptide repeat CF65_00610 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD CF65_00610 IPR018357 Hexapeptide transferase, conserved site CF65_00610 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CF65_00610 IPR011004 Trimeric LpxA-like superfamily CF65_00611 IPR029069 HotDog domain superfamily CF65_00611 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CF65_00611 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CF65_00612 IPR018357 Hexapeptide transferase, conserved site CF65_00612 IPR001451 Hexapeptide repeat CF65_00612 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily CF65_00612 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal CF65_00612 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CF65_00612 IPR011004 Trimeric LpxA-like superfamily CF65_00613 IPR003835 Glycosyl transferase, family 19 CF65_00614 IPR012337 Ribonuclease H-like superfamily CF65_00614 IPR022898 Ribonuclease HII CF65_00614 IPR036397 Ribonuclease H superfamily CF65_00614 IPR001352 Ribonuclease HII/HIII CF65_00614 IPR024567 Ribonuclease HII/HIII domain CF65_00615 IPR004680 Citrate transporter-like domain CF65_00615 IPR031312 Sodium/sulphate symporter, conserved site CF65_00615 IPR006037 Regulator of K+ conductance, C-terminal CF65_00615 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CF65_00616 IPR000374 Phosphatidate cytidylyltransferase CF65_00618 IPR008284 Molybdenum cofactor biosynthesis, conserved site CF65_00618 IPR001453 MoaB/Mog domain CF65_00618 IPR036425 MoaB/Mog-like domain superfamily CF65_00628 IPR008988 Transcriptional repressor, C-terminal CF65_00628 IPR030855 Bifunctional ligase/repressor BirA CF65_00628 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CF65_00628 IPR004409 Biotin operon repressor, helix-turn-helix domain CF65_00628 IPR003142 Biotin protein ligase, C-terminal CF65_00628 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CF65_00629 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CF65_00629 IPR005990 Inosine-5'-monophosphate dehydrogenase CF65_00629 IPR013785 Aldolase-type TIM barrel CF65_00629 IPR001093 IMP dehydrogenase/GMP reductase CF65_00629 IPR000644 CBS domain CF65_00632 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_00632 IPR036286 LexA/Signal peptidase-like superfamily CF65_00634 IPR001126 UmuC domain CF65_00634 IPR022880 DNA polymerase IV CF65_00634 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CF65_00634 IPR024728 DNA polymerase type-Y, HhH motif CF65_00635 IPR000489 Pterin-binding domain CF65_00635 IPR006390 Dihydropteroate synthase CF65_00635 IPR011005 Dihydropteroate synthase-like CF65_00636 IPR006352 Phosphoglucosamine mutase, bacterial type CF65_00636 IPR005841 Alpha-D-phosphohexomutase superfamily CF65_00636 IPR016066 Alpha-D-phosphohexomutase, conserved site CF65_00636 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CF65_00636 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CF65_00636 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CF65_00636 IPR005843 Alpha-D-phosphohexomutase, C-terminal CF65_00636 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CF65_00636 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CF65_00637 IPR029033 Histidine phosphatase superfamily CF65_00637 IPR004449 Phosphohistidine phosphatase SixA CF65_00637 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_00641 IPR007874 Septum formation inhibitor MinC, N-terminal CF65_00641 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily CF65_00641 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily CF65_00641 IPR013033 Septum formation inhibitor MinC CF65_00641 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CF65_00641 IPR005526 Septum formation inhibitor MinC, C-terminal CF65_00642 IPR027354 YcgL domain CF65_00642 IPR038068 YcgL-like superfamily CF65_00644 IPR000064 Endopeptidase, NLPC/P60 domain CF65_00644 IPR038765 Papain-like cysteine peptidase superfamily CF65_00646 IPR013785 Aldolase-type TIM barrel CF65_00646 IPR006269 3-deoxy-8-phosphooctulonate synthase CF65_00646 IPR006218 DAHP synthetase I/KDSA CF65_00647 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00647 IPR025714 Methyltransferase domain CF65_00647 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_00647 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CF65_00647 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CF65_00647 IPR004556 Methyltransferase HemK-like CF65_00649 IPR000352 Peptide chain release factor class I CF65_00649 IPR004373 Peptide chain release factor 1 CF65_00649 IPR005139 Peptide chain release factor CF65_00650 IPR008816 Glycine zipper 2TM domain CF65_00651 IPR010393 Protein of unknown function DUF991 CF65_00651 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CF65_00652 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00652 IPR008909 DALR anticodon binding CF65_00652 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CF65_00652 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_00652 IPR001278 Arginine-tRNA ligase CF65_00652 IPR035684 Arginyl-tRNA synthetase, catalytic core domain CF65_00652 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily CF65_00652 IPR005148 Arginyl tRNA synthetase N-terminal domain CF65_00654 IPR010352 Protein of unknown function DUF945 CF65_00657 IPR013126 Heat shock protein 70 family CF65_00657 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CF65_00657 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CF65_00657 IPR018181 Heat shock protein 70, conserved site CF65_00657 IPR012725 Chaperone DnaK CF65_00659 IPR018253 DnaJ domain, conserved site CF65_00659 IPR012724 Chaperone DnaJ CF65_00659 IPR008971 HSP40/DnaJ peptide-binding CF65_00659 IPR036869 Chaperone J-domain superfamily CF65_00659 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CF65_00659 IPR002939 Chaperone DnaJ, C-terminal CF65_00659 IPR001623 DnaJ domain CF65_00659 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CF65_00661 IPR023614 Porin domain superfamily CF65_00661 IPR002299 Porin, Neisseria sp. type CF65_00661 IPR033900 Porin domain, Gram-negative type CF65_00662 IPR006233 Cystathionine beta-lyase, bacterial CF65_00662 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_00662 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00662 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CF65_00662 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_00663 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_00663 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_00663 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CF65_00663 IPR006233 Cystathionine beta-lyase, bacterial CF65_00663 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00664 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CF65_00664 IPR000462 CDP-alcohol phosphatidyltransferase CF65_00668 IPR003539 Cytolethal distending toxin B CF65_00668 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CF65_00668 IPR005135 Endonuclease/exonuclease/phosphatase CF65_00669 IPR003558 Cytolethal distending toxin A/C CF65_00669 IPR000772 Ricin B, lectin domain CF65_00669 IPR035992 Ricin B-like lectins CF65_00669 IPR015957 Cytolethal distending toxin A CF65_00672 IPR003477 mRNA interferase PemK-like CF65_00672 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CF65_00674 IPR027546 Sirtuin, class III CF65_00674 IPR026590 Sirtuin family, catalytic core domain CF65_00674 IPR029035 DHS-like NAD/FAD-binding domain superfamily CF65_00674 IPR003000 Sirtuin family CF65_00674 IPR026591 Sirtuin, catalytic core small domain superfamily CF65_00675 IPR011901 Glutaredoxin-2 CF65_00675 IPR036249 Thioredoxin-like superfamily CF65_00675 IPR007494 Glutaredoxin 2, C-terminal CF65_00675 IPR011767 Glutaredoxin active site CF65_00675 IPR004045 Glutathione S-transferase, N-terminal CF65_00675 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CF65_00679 IPR004659 Ribonuclease E/G CF65_00679 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CF65_00679 IPR022967 RNA-binding domain, S1 CF65_00679 IPR003029 S1 domain CF65_00679 IPR012340 Nucleic acid-binding, OB-fold CF65_00680 IPR018212 Sodium/solute symporter, conserved site CF65_00680 IPR001734 Sodium/solute symporter CF65_00680 IPR011851 Sodium/proline symporter CF65_00680 IPR038377 Sodium/glucose symporter superfamily CF65_00682 IPR010017 tRNA U34 carboxymethyltransferase CF65_00682 IPR027555 tRNA (mo5U34)-methyltransferase-like CF65_00682 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00684 IPR042109 Adenylosuccinate synthetase, domain 1 CF65_00684 IPR018220 Adenylosuccinate synthase, GTP-binding site CF65_00684 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00684 IPR001114 Adenylosuccinate synthetase CF65_00684 IPR042111 Adenylosuccinate synthetase, domain 3 CF65_00684 IPR042110 Adenylosuccinate synthetase, domain 2 CF65_00684 IPR033128 Adenylosuccinate synthase, active site CF65_00688 IPR036869 Chaperone J-domain superfamily CF65_00688 IPR008971 HSP40/DnaJ peptide-binding CF65_00688 IPR018253 DnaJ domain, conserved site CF65_00688 IPR001623 DnaJ domain CF65_00688 IPR002939 Chaperone DnaJ, C-terminal CF65_00688 IPR023859 DNA-binding protein, curved-DNA CF65_00689 IPR005225 Small GTP-binding protein domain CF65_00689 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00689 IPR003593 AAA+ ATPase domain CF65_00689 IPR031166 EngA-type guanine nucleotide-binding (G) domain CF65_00689 IPR016484 GTP-binding protein EngA CF65_00689 IPR006073 GTP binding domain CF65_00689 IPR032859 GTPase Der, C-terminal KH-domain-like CF65_00689 IPR015946 K homology domain-like, alpha/beta CF65_00691 IPR011701 Major facilitator superfamily CF65_00691 IPR020846 Major facilitator superfamily domain CF65_00691 IPR023495 Sugar efflux transporter, putative CF65_00691 IPR036259 MFS transporter superfamily CF65_00694 IPR010550 Deoxycytidine triphosphate deaminase, bacterial CF65_00694 IPR011962 dCTP deaminase CF65_00694 IPR033704 dUTPase, trimeric CF65_00694 IPR036157 dUTPase-like superfamily CF65_00695 IPR000764 Uridine kinase-like CF65_00695 IPR026008 Uridine kinase CF65_00695 IPR006083 Phosphoribulokinase/uridine kinase CF65_00695 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00696 IPR026045 Ferric binding protein CF65_00698 IPR026045 Ferric binding protein CF65_00699 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_00699 IPR035906 MetI-like superfamily CF65_00700 IPR003439 ABC transporter-like CF65_00700 IPR003593 AAA+ ATPase domain CF65_00700 IPR013611 Transport-associated OB, type 2 CF65_00700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00700 IPR008995 Molybdate/tungstate binding, C-terminal CF65_00700 IPR015853 ABC transporter, ferric cation import, FbpC CF65_00700 IPR017871 ABC transporter, conserved site CF65_00705 IPR033942 Inositol monophosphatase CF65_00705 IPR022337 Inositol monophosphatase, SuhB CF65_00705 IPR000760 Inositol monophosphatase-like CF65_00705 IPR020550 Inositol monophosphatase, conserved site CF65_00705 IPR020583 Inositol monophosphatase, metal-binding site CF65_00706 IPR029028 Alpha/beta knot methyltransferases CF65_00706 IPR001537 tRNA/rRNA methyltransferase, SpoU type CF65_00706 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_00706 IPR004384 RNA methyltransferase TrmJ/LasT CF65_00707 IPR000944 Transcription regulator Rrf2-type CF65_00707 IPR010242 Transcription factor HTH, IscR CF65_00707 IPR030489 Transcription regulator Rrf2-type, conserved site CF65_00707 IPR036390 Winged helix DNA-binding domain superfamily CF65_00707 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00708 IPR016454 Cysteine desulfurase CF65_00708 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00708 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_00708 IPR010240 Cysteine desulfurase IscS CF65_00708 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_00708 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CF65_00708 IPR000192 Aminotransferase class V domain CF65_00709 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CF65_00709 IPR011339 ISC system FeS cluster assembly, IscU scaffold CF65_00711 IPR000361 FeS cluster biogenesis CF65_00711 IPR016092 FeS cluster insertion protein CF65_00711 IPR017870 FeS cluster insertion, C-terminal, conserved site CF65_00711 IPR035903 HesB-like domain superfamily CF65_00711 IPR011302 Iron-binding protein IscA, proteobacteria CF65_00712 IPR004640 Co-chaperone Hsc20 CF65_00712 IPR036386 HscB, C-terminal domain superfamily CF65_00712 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain CF65_00712 IPR001623 DnaJ domain CF65_00712 IPR036869 Chaperone J-domain superfamily CF65_00713 IPR042039 HscA chaperone, nucleotide-binding domain CF65_00713 IPR018181 Heat shock protein 70, conserved site CF65_00713 IPR010236 ISC system FeS cluster assembly, HscA chaperone CF65_00713 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CF65_00713 IPR013126 Heat shock protein 70 family CF65_00713 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CF65_00715 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria CF65_00715 IPR018298 Adrenodoxin, iron-sulphur binding site CF65_00715 IPR012675 Beta-grasp domain superfamily CF65_00715 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CF65_00715 IPR001055 Adrenodoxin CF65_00715 IPR036010 2Fe-2S ferredoxin-like superfamily CF65_00716 IPR036762 IscX-like superfamily CF65_00716 IPR007479 ISC system FeS cluster assembly, IscX CF65_00717 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00717 IPR002547 tRNA-binding domain CF65_00717 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CF65_00717 IPR012340 Nucleic acid-binding, OB-fold CF65_00717 IPR029038 Methionyl-tRNA synthetase, Zn-domain CF65_00717 IPR033911 Methioninyl-tRNA synthetase core domain CF65_00717 IPR015413 Methionyl/Leucyl tRNA synthetase CF65_00717 IPR014758 Methionyl-tRNA synthetase CF65_00717 IPR023458 Methionine-tRNA ligase, type 1 CF65_00717 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal CF65_00717 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain CF65_00717 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_00718 IPR034904 Fe-S cluster assembly domain superfamily CF65_00718 IPR019591 Mrp/NBP35 ATP-binding protein CF65_00718 IPR000808 Mrp, conserved site CF65_00718 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00718 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CF65_00721 IPR014756 Immunoglobulin E-set CF65_00721 IPR004867 Chitobiase C-terminal domain CF65_00721 IPR015883 Glycoside hydrolase family 20, catalytic domain CF65_00721 IPR013783 Immunoglobulin-like fold CF65_00721 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain CF65_00721 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal CF65_00721 IPR029018 Beta-hexosaminidase-like, domain 2 CF65_00721 IPR012291 CBM2, carbohydrate-binding domain superfamily CF65_00721 IPR017853 Glycoside hydrolase superfamily CF65_00721 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily CF65_00721 IPR025705 Beta-hexosaminidase CF65_00722 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CF65_00722 IPR001564 Nucleoside diphosphate kinase CF65_00722 IPR023005 Nucleoside diphosphate kinase, active site CF65_00722 IPR034907 Nucleoside diphosphate kinase-like domain CF65_00723 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CF65_00723 IPR008330 Peptidase M17, peptidase B CF65_00723 IPR001346 Interferon regulatory factor DNA-binding domain CF65_00723 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CF65_00725 IPR006196 RNA-binding domain, S1, IF1 type CF65_00725 IPR022967 RNA-binding domain, S1 CF65_00725 IPR004368 Translation initiation factor IF-1 CF65_00725 IPR012340 Nucleic acid-binding, OB-fold CF65_00726 IPR036526 Carbon-nitrogen hydrolase superfamily CF65_00726 IPR004563 Apolipoprotein N-acyltransferase CF65_00726 IPR003010 Carbon-nitrogen hydrolase CF65_00729 IPR016169 FAD-binding, type PCMH, subdomain 2 CF65_00729 IPR005170 Transporter-associated domain CF65_00729 IPR000644 CBS domain CF65_00729 IPR036318 FAD-binding, type PCMH-like superfamily CF65_00732 IPR004821 Cytidyltransferase-like domain CF65_00732 IPR000182 GNAT domain CF65_00732 IPR005216 Citrate lyase ligase CF65_00732 IPR016181 Acyl-CoA N-acyltransferase CF65_00732 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00732 IPR013166 Citrate lyase ligase, C-terminal CF65_00734 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CF65_00734 IPR006495 Citrate lyase acyl carrier protein CitD CF65_00735 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CF65_00735 IPR006475 Citrate lyase, beta subunit, bacteria CF65_00735 IPR011206 Citrate lyase beta subunit-like CF65_00735 IPR040442 Pyruvate kinase-like domain superfamily CF65_00735 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CF65_00737 IPR006472 Citrate lyase, alpha subunit CF65_00737 IPR037171 NagB/RpiA transferase-like CF65_00740 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CF65_00740 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG CF65_00740 IPR002736 Triphosphoribosyl-dephospho-CoA protein CF65_00741 IPR030676 Citrate carrier CitT-related CF65_00741 IPR001898 Solute carrier family 13 CF65_00744 IPR014718 Glycoside hydrolase-type carbohydrate-binding CF65_00744 IPR011013 Galactose mutarotase-like domain superfamily CF65_00744 IPR018052 Aldose 1-epimerase, conserved site CF65_00744 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CF65_00744 IPR015443 Aldose 1-epimerase CF65_00744 IPR013458 Aldose 1-epimerase, bacterial CF65_00745 IPR022963 Galactokinase, bacterial CF65_00745 IPR000705 Galactokinase CF65_00745 IPR019741 Galactokinase, conserved site CF65_00745 IPR019539 Galactokinase galactose-binding domain CF65_00745 IPR013750 GHMP kinase, C-terminal domain CF65_00745 IPR036554 GHMP kinase, C-terminal domain superfamily CF65_00745 IPR006204 GHMP kinase N-terminal domain CF65_00745 IPR006206 Mevalonate/galactokinase CF65_00745 IPR006203 GHMP kinase, ATP-binding, conserved site CF65_00745 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00747 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site CF65_00747 IPR036265 HIT-like superfamily CF65_00747 IPR001937 Galactose-1-phosphate uridyl transferase, class I CF65_00747 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal CF65_00747 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal CF65_00749 IPR028082 Periplasmic binding protein-like I CF65_00749 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CF65_00749 IPR000843 LacI-type HTH domain CF65_00750 IPR025997 Periplasmic binding protein CF65_00750 IPR028082 Periplasmic binding protein-like I CF65_00751 IPR003439 ABC transporter-like CF65_00751 IPR017871 ABC transporter, conserved site CF65_00751 IPR003593 AAA+ ATPase domain CF65_00751 IPR015862 ABC transporter, galactose import, MglA CF65_00751 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00753 IPR001851 ABC transporter, permease CF65_00753 IPR030158 Galactoside transport system permease protein MglC CF65_00757 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00757 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CF65_00757 IPR005467 Histidine kinase domain CF65_00757 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00757 IPR000700 PAS-associated, C-terminal CF65_00757 IPR036641 HPT domain superfamily CF65_00757 IPR035965 PAS domain superfamily CF65_00757 IPR013767 PAS fold CF65_00757 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CF65_00757 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CF65_00757 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB CF65_00757 IPR001789 Signal transduction response regulator, receiver domain CF65_00757 IPR000014 PAS domain CF65_00757 IPR011006 CheY-like superfamily CF65_00757 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily CF65_00757 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CF65_00757 IPR040642 Histidine kinase receptor ArcB, transmembrane domain CF65_00759 IPR014031 Beta-ketoacyl synthase, C-terminal CF65_00759 IPR014030 Beta-ketoacyl synthase, N-terminal CF65_00759 IPR016039 Thiolase-like CF65_00759 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CF65_00759 IPR018201 Beta-ketoacyl synthase, active site CF65_00759 IPR000794 Beta-ketoacyl synthase CF65_00760 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC CF65_00760 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal CF65_00760 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_00760 IPR006076 FAD dependent oxidoreductase CF65_00760 IPR008471 MnmC-like methyltransferase CF65_00761 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal CF65_00761 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC CF65_00761 IPR008471 MnmC-like methyltransferase CF65_00761 IPR006076 FAD dependent oxidoreductase CF65_00761 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_00762 IPR039426 Vitamin B12 transporter BtuB-like CF65_00762 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_00762 IPR006970 PT repeat CF65_00762 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_00762 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CF65_00762 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_00762 IPR010917 TonB-dependent receptor, conserved site CF65_00762 IPR012910 TonB-dependent receptor, plug domain CF65_00763 IPR039426 Vitamin B12 transporter BtuB-like CF65_00763 IPR012910 TonB-dependent receptor, plug domain CF65_00763 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_00763 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_00763 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CF65_00763 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_00763 IPR010917 TonB-dependent receptor, conserved site CF65_00763 IPR006970 PT repeat CF65_00764 IPR039426 Vitamin B12 transporter BtuB-like CF65_00764 IPR012910 TonB-dependent receptor, plug domain CF65_00764 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_00764 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_00764 IPR006970 PT repeat CF65_00764 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CF65_00764 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_00764 IPR010917 TonB-dependent receptor, conserved site CF65_00766 IPR009012 GrpE nucleotide exchange factor, head CF65_00766 IPR013805 GrpE nucleotide exchange factor, coiled-coil CF65_00766 IPR000740 GrpE nucleotide exchange factor CF65_00768 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CF65_00768 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CF65_00768 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CF65_00768 IPR002504 NAD kinase CF65_00769 IPR004604 DNA recombination/repair protein RecN CF65_00769 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00769 IPR003395 RecF/RecN/SMC, N-terminal CF65_00770 IPR005618 Outer membrane protein, OmpW CF65_00770 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CF65_00774 IPR006008 Intracellular septation protein A CF65_00775 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CF65_00775 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CF65_00775 IPR029069 HotDog domain superfamily CF65_00775 IPR006683 Thioesterase domain CF65_00776 IPR005545 YCII-related CF65_00776 IPR011008 Dimeric alpha-beta barrel CF65_00777 IPR000189 Prokaryotic transglycosylase, active site CF65_00777 IPR008939 Lytic transglycosylase, superhelical U-shaped CF65_00777 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily CF65_00777 IPR008258 Transglycosylase SLT domain 1 CF65_00777 IPR012289 Lytic transglycosylase, superhelical linker CF65_00777 IPR023346 Lysozyme-like domain superfamily CF65_00778 IPR000831 Trp repressor CF65_00778 IPR013335 Trp repressor, bacterial CF65_00778 IPR010921 Trp repressor/replication initiator CF65_00778 IPR038116 TrpR-like superfamily CF65_00780 IPR001264 Glycosyl transferase, family 51 CF65_00780 IPR036950 Penicillin binding protein transglycosylase domain CF65_00780 IPR023346 Lysozyme-like domain superfamily CF65_00780 IPR011812 Biosynthetic peptidoglycan transglycosylase CF65_00785 IPR002104 Integrase, catalytic domain CF65_00785 IPR038488 Integrase, DNA-binding domain superfamily CF65_00785 IPR011010 DNA breaking-rejoining enzyme, catalytic core CF65_00785 IPR013762 Integrase-like, catalytic domain superfamily CF65_00785 IPR010998 Integrase/recombinase, N-terminal CF65_00785 IPR025166 Integrase, DNA-binding domain CF65_00786 IPR004692 Preprotein translocase SecG subunit CF65_00789 IPR013497 DNA topoisomerase, type IA, central CF65_00789 IPR023406 DNA topoisomerase, type IA, active site CF65_00789 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CF65_00789 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CF65_00789 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CF65_00789 IPR023405 DNA topoisomerase, type IA, core domain CF65_00789 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CF65_00789 IPR005738 DNA topoisomerase III CF65_00789 IPR000380 DNA topoisomerase, type IA CF65_00789 IPR006171 TOPRIM domain CF65_00789 IPR003601 DNA topoisomerase, type IA, domain 2 CF65_00789 IPR034144 DNA topoisomerase 3-like, TOPRIM domain CF65_00790 IPR006171 TOPRIM domain CF65_00790 IPR015967 Recombination protein RecR, conserved site CF65_00790 IPR023628 Recombination protein RecR, C4-type zinc finger CF65_00790 IPR034137 RecR, TOPRIM domain CF65_00790 IPR000093 DNA recombination protein RecR CF65_00790 IPR023627 Recombination protein RecR CF65_00792 IPR004401 Nucleoid-associated protein YbaB/EbfC family CF65_00792 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CF65_00794 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CF65_00794 IPR029052 Metallo-dependent phosphatase-like CF65_00795 IPR002491 ABC transporter periplasmic binding domain CF65_00796 IPR037294 ABC transporter, BtuC-like CF65_00796 IPR000522 ABC transporter, permease protein, BtuC-like CF65_00798 IPR000522 ABC transporter, permease protein, BtuC-like CF65_00798 IPR037294 ABC transporter, BtuC-like CF65_00799 IPR003593 AAA+ ATPase domain CF65_00799 IPR003439 ABC transporter-like CF65_00799 IPR017871 ABC transporter, conserved site CF65_00799 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00801 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CF65_00801 IPR006195 Aminoacyl-tRNA synthetase, class II CF65_00801 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CF65_00801 IPR004525 Elongation factor P--(R)-beta-lysine ligase CF65_00804 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CF65_00804 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CF65_00804 IPR005884 Fumarate reductase, flavoprotein subunit CF65_00804 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CF65_00804 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CF65_00804 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_00804 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CF65_00804 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CF65_00805 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CF65_00805 IPR012675 Beta-grasp domain superfamily CF65_00805 IPR036010 2Fe-2S ferredoxin-like superfamily CF65_00805 IPR009051 Alpha-helical ferredoxin CF65_00805 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CF65_00805 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CF65_00805 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CF65_00805 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00805 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_00806 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CF65_00806 IPR003510 Fumarate reductase, subunit C CF65_00807 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CF65_00807 IPR003418 Fumarate reductase, subunit D CF65_00809 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_00809 IPR019614 S-adenosylmethionine-dependent methyltransferase CF65_00809 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00809 IPR004114 THUMP domain CF65_00809 IPR017244 Ribosomal RNA large subunit methyltransferase K/L CF65_00809 IPR000241 Putative RNA methylase domain CF65_00810 IPR020843 Polyketide synthase, enoylreductase domain CF65_00810 IPR011032 GroES-like superfamily CF65_00810 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CF65_00810 IPR036291 NAD(P)-binding domain superfamily CF65_00810 IPR013149 Alcohol dehydrogenase, C-terminal CF65_00810 IPR013154 Alcohol dehydrogenase, N-terminal CF65_00811 IPR041682 AAA domain, group 14 CF65_00811 IPR025420 Domain of unknown function DUF4143 CF65_00811 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00812 IPR018317 Queuosine biosynthesis protein QueC CF65_00812 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00816 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA CF65_00816 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CF65_00816 IPR029052 Metallo-dependent phosphatase-like CF65_00817 IPR020084 NUDIX hydrolase, conserved site CF65_00817 IPR000086 NUDIX hydrolase domain CF65_00817 IPR004385 Nucleoside diphosphate pyrophosphatase CF65_00817 IPR015797 NUDIX hydrolase-like domain superfamily CF65_00819 IPR003709 Peptidase M15B CF65_00819 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily CF65_00820 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CF65_00820 IPR002933 Peptidase M20 CF65_00820 IPR011650 Peptidase M20, dimerisation domain CF65_00820 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CF65_00820 IPR036264 Bacterial exopeptidase dimerisation domain CF65_00822 IPR036249 Thioredoxin-like superfamily CF65_00822 IPR006504 Transcriptional regulator Spx/MgsR CF65_00822 IPR006660 Arsenate reductase-like CF65_00823 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00823 IPR001404 Heat shock protein Hsp90 family CF65_00823 IPR037196 HSP90, C-terminal domain CF65_00823 IPR019805 Heat shock protein Hsp90, conserved site CF65_00823 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00823 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00823 IPR020575 Heat shock protein Hsp90, N-terminal CF65_00825 IPR018528 Prephenate dehydratase, conserved site CF65_00825 IPR002912 ACT domain CF65_00825 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CF65_00825 IPR036263 Chorismate mutase type II superfamily CF65_00825 IPR010952 Chorismate mutase, gammaproteobacteria CF65_00825 IPR036979 Chorismate mutase domain superfamily CF65_00825 IPR001086 Prephenate dehydratase CF65_00825 IPR002701 Chorismate mutase II, prokaryotic-type CF65_00826 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00826 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CF65_00826 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CF65_00826 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CF65_00827 IPR003008 Tubulin/FtsZ, GTPase domain CF65_00827 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CF65_00827 IPR008280 Tubulin/FtsZ, C-terminal CF65_00827 IPR024757 Cell division protein FtsZ, C-terminal CF65_00827 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CF65_00827 IPR000158 Cell division protein FtsZ CF65_00827 IPR020805 Cell division protein FtsZ, conserved site CF65_00830 IPR020823 Cell division protein FtsA CF65_00830 IPR003494 SHS2 domain inserted in FtsA CF65_00831 IPR005548 Cell division protein FtsQ/DivIB CF65_00831 IPR026579 Cell division protein FtsQ CF65_00831 IPR034746 POTRA domain CF65_00831 IPR013685 POTRA domain, FtsQ-type CF65_00832 IPR005905 D-alanine--D-alanine ligase CF65_00832 IPR011095 D-alanine--D-alanine ligase, C-terminal CF65_00832 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CF65_00832 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CF65_00832 IPR013815 ATP-grasp fold, subdomain 1 CF65_00832 IPR011761 ATP-grasp fold CF65_00832 IPR016185 Pre-ATP-grasp domain superfamily CF65_00833 IPR036615 Mur ligase, C-terminal domain superfamily CF65_00833 IPR005758 UDP-N-acetylmuramate--L-alanine ligase CF65_00833 IPR036565 Mur-like, catalytic domain superfamily CF65_00833 IPR000713 Mur ligase, N-terminal catalytic domain CF65_00833 IPR004101 Mur ligase, C-terminal CF65_00833 IPR013221 Mur ligase, central CF65_00835 IPR007235 Glycosyl transferase, family 28, C-terminal CF65_00835 IPR006009 N-acetylglucosaminyltransferase, MurG CF65_00835 IPR004276 Glycosyltransferase family 28, N-terminal domain CF65_00837 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CF65_00837 IPR013437 Probable peptidoglycan glycosyltransferase FtsW CF65_00837 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CF65_00838 IPR013221 Mur ligase, central CF65_00838 IPR036565 Mur-like, catalytic domain superfamily CF65_00838 IPR036615 Mur ligase, C-terminal domain superfamily CF65_00838 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CF65_00838 IPR004101 Mur ligase, C-terminal CF65_00839 IPR000715 Glycosyl transferase, family 4 CF65_00839 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CF65_00839 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CF65_00840 IPR035911 MurE/MurF, N-terminal CF65_00840 IPR004101 Mur ligase, C-terminal CF65_00840 IPR036615 Mur ligase, C-terminal domain superfamily CF65_00840 IPR013221 Mur ligase, central CF65_00840 IPR036565 Mur-like, catalytic domain superfamily CF65_00840 IPR000713 Mur ligase, N-terminal catalytic domain CF65_00840 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CF65_00841 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CF65_00841 IPR036565 Mur-like, catalytic domain superfamily CF65_00841 IPR035911 MurE/MurF, N-terminal CF65_00841 IPR000713 Mur ligase, N-terminal catalytic domain CF65_00841 IPR013221 Mur ligase, central CF65_00841 IPR036615 Mur ligase, C-terminal domain superfamily CF65_00841 IPR004101 Mur ligase, C-terminal CF65_00844 IPR001460 Penicillin-binding protein, transpeptidase CF65_00844 IPR005311 Penicillin-binding protein, dimerisation domain CF65_00844 IPR012338 Beta-lactamase/transpeptidase-like CF65_00844 IPR037532 Peptidoglycan D,D-transpeptidase FtsI CF65_00844 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CF65_00846 IPR011922 Cell division protein FtsL CF65_00847 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00847 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CF65_00847 IPR002903 Ribosomal RNA small subunit methyltransferase H CF65_00849 IPR035644 MraZ, C-terminal CF65_00849 IPR020603 MraZ domain CF65_00849 IPR037914 SpoVT-AbrB domain superfamily CF65_00849 IPR035642 MraZ, N-terminal CF65_00849 IPR038619 MraZ superfamily CF65_00849 IPR007159 SpoVT-AbrB domain CF65_00849 IPR003444 Transcriptional regulator MraZ CF65_00851 IPR003706 CstA, N-terminal domain CF65_00854 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_00854 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CF65_00854 IPR035906 MetI-like superfamily CF65_00855 IPR035906 MetI-like superfamily CF65_00855 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_00855 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CF65_00856 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CF65_00856 IPR018313 Solute-binding protein family 3, conserved site CF65_00856 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CF65_00858 IPR003439 ABC transporter-like CF65_00858 IPR003593 AAA+ ATPase domain CF65_00858 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00858 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CF65_00858 IPR017871 ABC transporter, conserved site CF65_00860 IPR035461 GmhA/DiaA CF65_00860 IPR004515 Phosphoheptose isomerase CF65_00860 IPR001347 Sugar isomerase (SIS) CF65_00861 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00861 IPR004576 Transcription-repair coupling factor CF65_00861 IPR001650 Helicase, C-terminal CF65_00861 IPR011545 DEAD/DEAH box helicase domain CF65_00861 IPR037235 TRCF-like, C-terminal domain CF65_00861 IPR005118 Transcription-repair-coupling factor, C-terminal domain CF65_00861 IPR041471 UvrB, interaction domain CF65_00861 IPR003711 CarD-like/TRCF domain CF65_00861 IPR036101 CarD-like/TRCF domain superfamily CF65_00861 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_00863 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA CF65_00863 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain CF65_00863 IPR038321 TmcA, C-terminal domain superfamily CF65_00863 IPR032672 TmcA/NAT10/Kre33 CF65_00863 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00863 IPR007807 Helicase domain CF65_00863 IPR000182 GNAT domain CF65_00863 IPR016181 Acyl-CoA N-acyltransferase CF65_00865 IPR020549 Endoribonuclease YbeY, conserved site CF65_00865 IPR002036 Endoribonuclease YbeY CF65_00865 IPR023091 Metalloprotease catalytic domain superfamily, predicted CF65_00871 IPR007055 BON domain CF65_00871 IPR004846 Type II/III secretion system CF65_00871 IPR032789 Pilus formation protein, N-terminal CF65_00871 IPR001775 GspD/PilQ family CF65_00871 IPR014004 Transport-associated and nodulation domain, bacteria CF65_00874 IPR001482 Type II/IV secretion system protein CF65_00874 IPR022399 Helicase/secretion neighbourhood ATPase CF65_00874 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00884 IPR037272 Sodium:neurotransmitter symporter superfamily CF65_00884 IPR000175 Sodium:neurotransmitter symporter CF65_00885 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CF65_00885 IPR006145 Pseudouridine synthase, RsuA/RluA CF65_00885 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CF65_00885 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CF65_00885 IPR020103 Pseudouridine synthase, catalytic domain superfamily CF65_00892 IPR005225 Small GTP-binding protein domain CF65_00892 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00892 IPR000795 Transcription factor, GTP-binding domain CF65_00892 IPR009000 Translation protein, beta-barrel domain superfamily CF65_00892 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CF65_00892 IPR004535 Translation elongation factor, selenocysteine-specific CF65_00892 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00892 IPR015191 Translation elongation factor SelB, winged helix, type 3 CF65_00892 IPR015190 Translation elongation factor SelB, winged helix, type 2 CF65_00892 IPR004161 Translation elongation factor EFTu-like, domain 2 CF65_00892 IPR036390 Winged helix DNA-binding domain superfamily CF65_00894 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00894 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_00894 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain CF65_00894 IPR004534 L-seryl-tRNA(Sec) selenium transferase CF65_00894 IPR018319 L-seryl-tRNA selenium transferase-like CF65_00896 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CF65_00896 IPR006195 Aminoacyl-tRNA synthetase, class II CF65_00896 IPR004154 Anticodon-binding CF65_00896 IPR036621 Anticodon-binding domain superfamily CF65_00896 IPR002316 Proline-tRNA ligase, class IIa CF65_00896 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CF65_00896 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CF65_00896 IPR033730 Prokaryote proline-tRNA ligase core domain CF65_00896 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CF65_00896 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CF65_00899 IPR000390 Small multidrug resistance protein family CF65_00900 IPR005631 Flavinator of succinate dehydrogenase CF65_00900 IPR036714 Flavinator of succinate dehydrogenase superfamily CF65_00902 IPR014284 RNA polymerase sigma-70 like domain CF65_00902 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CF65_00902 IPR007627 RNA polymerase sigma-70 region 2 CF65_00902 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CF65_00902 IPR014286 RNA polymerase sigma-70 RpoE type CF65_00902 IPR013325 RNA polymerase sigma factor, region 2 CF65_00902 IPR013324 RNA polymerase sigma factor, region 3/4-like CF65_00902 IPR039425 RNA polymerase sigma-70 like CF65_00902 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00904 IPR005573 Anti sigma-E protein RseA, C-terminal CF65_00904 IPR005572 Anti sigma-E protein RseA, N-terminal CF65_00904 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily CF65_00904 IPR026279 Sigma-E factor negative regulatory protein RseA CF65_00906 IPR005588 MucB/RseB CF65_00906 IPR033434 MucB/RseB, N-terminal CF65_00906 IPR038484 MucB/RseB, C-terminal domain superfamily CF65_00906 IPR033436 MucB/RseB, C-terminal CF65_00908 IPR026268 Protein RseC CF65_00908 IPR007359 Positive regulator of sigma(E), RseC/MucC CF65_00909 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00909 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain CF65_00912 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00912 IPR036291 NAD(P)-binding domain superfamily CF65_00912 IPR020904 Short-chain dehydrogenase/reductase, conserved site CF65_00914 IPR001160 Peptidase M20C, Xaa-His dipeptidase CF65_00914 IPR011650 Peptidase M20, dimerisation domain CF65_00914 IPR002933 Peptidase M20 CF65_00915 IPR000836 Phosphoribosyltransferase domain CF65_00915 IPR029057 Phosphoribosyltransferase-like CF65_00915 IPR023747 Xanthine-guanine phosphoribosyltransferase CF65_00919 IPR020889 LPS-assembly protein LptD CF65_00919 IPR007543 LptD, C-terminal CF65_00919 IPR005653 Organic solvent tolerance-like, N-terminal CF65_00920 IPR011257 DNA glycosylase CF65_00920 IPR004597 DNA-3-methyladenine glycosylase I CF65_00920 IPR005019 Methyladenine glycosylase CF65_00921 IPR009898 Protein of unknown function DUF1440 CF65_00923 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CF65_00923 IPR029066 PLP-binding barrel CF65_00923 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CF65_00923 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CF65_00923 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CF65_00923 IPR002986 Diaminopimelate decarboxylase, LysA CF65_00923 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CF65_00923 IPR000183 Ornithine/DAP/Arg decarboxylase CF65_00926 IPR020895 Frataxin conserved site CF65_00926 IPR036524 Frataxin/CyaY superfamily CF65_00926 IPR002908 Frataxin/CyaY CF65_00927 IPR018982 RQC domain CF65_00927 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00927 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00927 IPR002121 HRDC domain CF65_00927 IPR010997 HRDC-like superfamily CF65_00927 IPR001650 Helicase, C-terminal CF65_00927 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_00927 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CF65_00927 IPR004589 DNA helicase, ATP-dependent, RecQ type CF65_00927 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CF65_00927 IPR011545 DEAD/DEAH box helicase domain CF65_00929 IPR034160 DNA gyrase subunit B, TOPRIM domain CF65_00929 IPR002288 DNA gyrase B subunit, C-terminal CF65_00929 IPR041423 DNA gyrase subunit B insert domain CF65_00929 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00929 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00929 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00929 IPR001241 DNA topoisomerase, type IIA CF65_00929 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CF65_00929 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CF65_00929 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CF65_00929 IPR018522 DNA topoisomerase, type IIA, conserved site CF65_00929 IPR006171 TOPRIM domain CF65_00929 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00929 IPR011557 DNA gyrase, subunit B CF65_00930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00930 IPR006083 Phosphoribulokinase/uridine kinase CF65_00930 IPR004566 Pantothenate kinase CF65_00931 IPR033720 Elongation factor Tu, domain 2 CF65_00931 IPR004161 Translation elongation factor EFTu-like, domain 2 CF65_00931 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CF65_00931 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CF65_00931 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CF65_00931 IPR000795 Transcription factor, GTP-binding domain CF65_00931 IPR009000 Translation protein, beta-barrel domain superfamily CF65_00931 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CF65_00931 IPR031157 Tr-type G domain, conserved site CF65_00931 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00931 IPR005225 Small GTP-binding protein domain CF65_00932 IPR028082 Periplasmic binding protein-like I CF65_00932 IPR025997 Periplasmic binding protein CF65_00933 IPR003439 ABC transporter-like CF65_00933 IPR003593 AAA+ ATPase domain CF65_00933 IPR017871 ABC transporter, conserved site CF65_00933 IPR015861 ABC transporter, ribose import, RbsA CF65_00933 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00934 IPR017871 ABC transporter, conserved site CF65_00934 IPR003439 ABC transporter-like CF65_00934 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00934 IPR003593 AAA+ ATPase domain CF65_00934 IPR015861 ABC transporter, ribose import, RbsA CF65_00935 IPR001851 ABC transporter, permease CF65_00936 IPR001851 ABC transporter, permease CF65_00937 IPR018485 Carbohydrate kinase, FGGY, C-terminal CF65_00937 IPR018483 Carbohydrate kinase, FGGY, conserved site CF65_00937 IPR000577 Carbohydrate kinase, FGGY CF65_00937 IPR018484 Carbohydrate kinase, FGGY, N-terminal CF65_00938 IPR018484 Carbohydrate kinase, FGGY, N-terminal CF65_00938 IPR018483 Carbohydrate kinase, FGGY, conserved site CF65_00938 IPR000577 Carbohydrate kinase, FGGY CF65_00938 IPR018485 Carbohydrate kinase, FGGY, C-terminal CF65_00939 IPR022967 RNA-binding domain, S1 CF65_00939 IPR032639 Tex protein, YqgF-like domain CF65_00939 IPR018974 Tex-like protein, N-terminal CF65_00939 IPR012337 Ribonuclease H-like superfamily CF65_00939 IPR003029 S1 domain CF65_00939 IPR023319 Tex-like protein, HTH domain superfamily CF65_00939 IPR041692 HHH domain 9 CF65_00939 IPR023323 Tex-like domain superfamily CF65_00939 IPR006641 YqgF/RNase H-like domain CF65_00939 IPR037027 YqgF/RNase H-like domain superfamily CF65_00939 IPR012340 Nucleic acid-binding, OB-fold CF65_00939 IPR010994 RuvA domain 2-like CF65_00940 IPR036390 Winged helix DNA-binding domain superfamily CF65_00940 IPR000847 Transcription regulator HTH, LysR CF65_00940 IPR005119 LysR, substrate-binding CF65_00940 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00941 IPR001898 Solute carrier family 13 CF65_00941 IPR030676 Citrate carrier CitT-related CF65_00942 IPR029033 Histidine phosphatase superfamily CF65_00942 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CF65_00942 IPR017578 Alpha-ribazole phosphatase, CobC CF65_00942 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_00943 IPR022967 RNA-binding domain, S1 CF65_00943 IPR010994 RuvA domain 2-like CF65_00943 IPR012337 Ribonuclease H-like superfamily CF65_00943 IPR041692 HHH domain 9 CF65_00943 IPR003029 S1 domain CF65_00943 IPR032639 Tex protein, YqgF-like domain CF65_00943 IPR006641 YqgF/RNase H-like domain CF65_00943 IPR037027 YqgF/RNase H-like domain superfamily CF65_00943 IPR012340 Nucleic acid-binding, OB-fold CF65_00943 IPR018974 Tex-like protein, N-terminal CF65_00943 IPR023323 Tex-like domain superfamily CF65_00943 IPR023319 Tex-like protein, HTH domain superfamily CF65_00944 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CF65_00944 IPR006358 Transcription elongation factor GreB CF65_00944 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CF65_00944 IPR023459 Transcription elongation factor GreA/GreB family CF65_00944 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CF65_00944 IPR028624 Transcription elongation factor GreA/GreB CF65_00944 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CF65_00944 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CF65_00948 IPR014289 RNA polymerase sigma-24-related CF65_00948 IPR039425 RNA polymerase sigma-70 like CF65_00948 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00948 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CF65_00948 IPR014284 RNA polymerase sigma-70 like domain CF65_00948 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CF65_00948 IPR013325 RNA polymerase sigma factor, region 2 CF65_00948 IPR013324 RNA polymerase sigma factor, region 3/4-like CF65_00948 IPR007627 RNA polymerase sigma-70 region 2 CF65_00950 IPR003744 Queuosine precursor transporter CF65_00952 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_00952 IPR005254 Heme biosynthesis-associated TPR protein CF65_00952 IPR010817 HemY, N-terminal CF65_00953 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CF65_00954 IPR039793 Uroporphyrinogen-III synthase CF65_00954 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily CF65_00954 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase CF65_00957 IPR022417 Porphobilinogen deaminase, N-terminal CF65_00957 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily CF65_00957 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CF65_00957 IPR000860 Porphobilinogen deaminase CF65_00957 IPR022418 Porphobilinogen deaminase, C-terminal CF65_00958 IPR000274 Adenylate cyclase, class-I CF65_00958 IPR024686 Adenylate cyclase class-I, conserved site CF65_00958 IPR024685 Adenylate cyclase class-I, N-terminal domain CF65_00959 IPR001789 Signal transduction response regulator, receiver domain CF65_00959 IPR000792 Transcription regulator LuxR, C-terminal CF65_00959 IPR011006 CheY-like superfamily CF65_00959 IPR016032 Signal transduction response regulator, C-terminal effector CF65_00960 IPR035243 TamA, POTRA domain 1 CF65_00960 IPR039910 Surface antigen D15-like CF65_00960 IPR000184 Bacterial surface antigen (D15) CF65_00961 IPR007452 Translocation and assembly module TamB CF65_00962 IPR022371 Exopolyphosphatase CF65_00962 IPR003695 Ppx/GppA phosphatase CF65_00964 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site CF65_00964 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CF65_00964 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising CF65_00964 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CF65_00969 IPR020084 NUDIX hydrolase, conserved site CF65_00969 IPR022925 NADH pyrophosphatase NudC CF65_00969 IPR000086 NUDIX hydrolase domain CF65_00969 IPR015797 NUDIX hydrolase-like domain superfamily CF65_00969 IPR015376 Zinc ribbon, NADH pyrophosphatase CF65_00970 IPR006361 Uroporphyrinogen decarboxylase HemE CF65_00970 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CF65_00970 IPR038071 UROD/MetE-like superfamily CF65_00971 IPR007338 Protein of unknown function DUF416 CF65_00971 IPR023381 YP001051499.1-like domain superfamily CF65_00972 IPR000119 Histone-like DNA-binding protein CF65_00972 IPR020816 Histone-like DNA-binding protein, conserved site CF65_00972 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CF65_00973 IPR036390 Winged helix DNA-binding domain superfamily CF65_00973 IPR037171 NagB/RpiA transferase-like CF65_00973 IPR014036 DeoR C-terminal sensor domain CF65_00973 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00973 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CF65_00973 IPR001034 DeoR-type HTH domain CF65_00974 IPR035466 GlmS/AgaS, SIS domain 1 CF65_00974 IPR035490 GlmS/FrlB, SIS domain 2 CF65_00974 IPR017932 Glutamine amidotransferase type 2 domain CF65_00974 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CF65_00974 IPR001347 Sugar isomerase (SIS) CF65_00974 IPR029055 Nucleophile aminohydrolases, N-terminal CF65_00976 IPR029058 Alpha/Beta hydrolase fold CF65_00976 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain CF65_00977 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00977 IPR036390 Winged helix DNA-binding domain superfamily CF65_00977 IPR005119 LysR, substrate-binding CF65_00977 IPR000847 Transcription regulator HTH, LysR CF65_00981 IPR029058 Alpha/Beta hydrolase fold CF65_00981 IPR002018 Carboxylesterase, type B CF65_00981 IPR019819 Carboxylesterase type B, conserved site CF65_00981 IPR000997 Cholinesterase CF65_00981 IPR019826 Carboxylesterase type B, active site CF65_00982 IPR023210 NADP-dependent oxidoreductase domain CF65_00982 IPR018170 Aldo/keto reductase, conserved site CF65_00982 IPR020471 Aldo/keto reductase CF65_00982 IPR036812 NADP-dependent oxidoreductase domain superfamily CF65_00983 IPR018170 Aldo/keto reductase, conserved site CF65_00983 IPR020471 Aldo/keto reductase CF65_00983 IPR036812 NADP-dependent oxidoreductase domain superfamily CF65_00983 IPR023210 NADP-dependent oxidoreductase domain CF65_00985 IPR000847 Transcription regulator HTH, LysR CF65_00985 IPR005119 LysR, substrate-binding CF65_00985 IPR036390 Winged helix DNA-binding domain superfamily CF65_00985 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00988 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00988 IPR033186 Helicase HerA-like C-terminal CF65_00990 IPR005302 Molybdenum cofactor sulfurase, C-terminal CF65_00990 IPR011037 Pyruvate kinase-like, insert domain superfamily CF65_00991 IPR004027 SEC-C motif CF65_00991 IPR032710 NTF2-like domain superfamily CF65_00991 IPR023006 Uncharacterised protein family UPF0225 CF65_00992 IPR023679 Uncharacterised protein family UPF0761, bacterial CF65_00992 IPR017039 Virulence factor BrkB CF65_00993 IPR003732 D-aminoacyl-tRNA deacylase DTD CF65_00993 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CF65_00994 IPR004445 Sodium/glutamate symport carrier protein GltS CF65_00995 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CF65_00995 IPR003660 HAMP domain CF65_00995 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00995 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CF65_00995 IPR032404 Two-component sensor protein CpxA, periplasmic domain CF65_00995 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CF65_00995 IPR038515 CpxA, periplasmic domain superfamily CF65_00995 IPR005467 Histidine kinase domain CF65_00997 IPR001867 OmpR/PhoB-type DNA-binding domain CF65_00997 IPR001789 Signal transduction response regulator, receiver domain CF65_00997 IPR039420 Transcriptional regulatory protein WalR-like CF65_00997 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00997 IPR011006 CheY-like superfamily CF65_00998 IPR007450 Lipoprotein SmpA/OmlA CF65_00998 IPR037873 BamE-like CF65_00998 IPR026592 Outer membrane protein assembly factor BamE CF65_01001 IPR007358 Nucleoid-associated protein NdpA CF65_01003 IPR009857 Uncharacterised protein family UPF0352 CF65_01003 IPR023202 YejL-like superfamily CF65_01005 IPR012159 Inner membrane protein YejM CF65_01005 IPR024588 Inner membrane protein YejM, N-terminal CF65_01005 IPR000917 Sulfatase, N-terminal CF65_01005 IPR017850 Alkaline-phosphatase-like, core domain superfamily CF65_01006 IPR032466 Metal-dependent hydrolase CF65_01008 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CF65_01008 IPR011551 NTP pyrophosphohydrolase MazG CF65_01009 IPR006015 Universal stress protein A family CF65_01009 IPR006016 UspA CF65_01009 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01011 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CF65_01011 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CF65_01011 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CF65_01011 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CF65_01011 IPR009000 Translation protein, beta-barrel domain superfamily CF65_01011 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CF65_01011 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CF65_01011 IPR002318 Alanine-tRNA ligase, class IIc CF65_01011 IPR003156 DHHA1 domain CF65_01012 IPR036107 Carbon storage regulator superfamily CF65_01012 IPR003751 Translational regulator CsrA CF65_01013 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CF65_01013 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CF65_01013 IPR016066 Alpha-D-phosphohexomutase, conserved site CF65_01013 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CF65_01013 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CF65_01013 IPR005841 Alpha-D-phosphohexomutase superfamily CF65_01013 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CF65_01013 IPR005843 Alpha-D-phosphohexomutase, C-terminal CF65_01014 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CF65_01014 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01014 IPR005835 Nucleotidyl transferase domain CF65_01015 IPR002084 Methionine repressor MetJ CF65_01015 IPR023453 Methionine repressor MetJ domain superfamily CF65_01015 IPR010985 Ribbon-helix-helix CF65_01017 IPR015947 PUA-like superfamily CF65_01017 IPR006700 Ribosomal RNA small subunit methyltransferase E CF65_01017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_01017 IPR029028 Alpha/beta knot methyltransferases CF65_01018 IPR003774 Protein of unknown function UPF0301 CF65_01019 IPR012337 Ribonuclease H-like superfamily CF65_01019 IPR005227 Putative pre-16S rRNA nuclease CF65_01019 IPR006641 YqgF/RNase H-like domain CF65_01019 IPR037027 YqgF/RNase H-like domain superfamily CF65_01020 IPR036849 Enolase-like, C-terminal domain superfamily CF65_01020 IPR020810 Enolase, C-terminal TIM barrel domain CF65_01020 IPR020809 Enolase, conserved site CF65_01020 IPR020811 Enolase, N-terminal CF65_01020 IPR029017 Enolase-like, N-terminal CF65_01020 IPR000941 Enolase CF65_01022 IPR023382 Adenine nucleotide alpha hydrolase-like domains CF65_01022 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01022 IPR004506 tRNA-specific 2-thiouridylase CF65_01023 IPR007495 (Na+)-NQR maturation factor NqrM CF65_01024 IPR042159 Flavin-trafficking protein ApbE CF65_01024 IPR003374 ApbE-like superfamily CF65_01024 IPR024932 Flavin transferase ApbE CF65_01027 IPR017938 Riboflavin synthase-like beta-barrel CF65_01027 IPR001433 Oxidoreductase FAD/NAD(P)-binding CF65_01027 IPR036010 2Fe-2S ferredoxin-like superfamily CF65_01027 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F CF65_01027 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CF65_01027 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CF65_01027 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CF65_01027 IPR017927 FAD-binding domain, ferredoxin reductase-type CF65_01027 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CF65_01027 IPR012675 Beta-grasp domain superfamily CF65_01028 IPR003667 NqrDE/RnfAE CF65_01028 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E CF65_01029 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D CF65_01029 IPR003667 NqrDE/RnfAE CF65_01031 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C CF65_01031 IPR007329 FMN-binding CF65_01032 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD CF65_01032 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B CF65_01033 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain CF65_01033 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A CF65_01039 IPR036065 BolA-like superfamily CF65_01039 IPR002634 BolA protein CF65_01040 IPR005619 Uncharacterised protein family, YajG CF65_01042 IPR024570 Murein transglycosylase-C, N-terminal CF65_01042 IPR000189 Prokaryotic transglycosylase, active site CF65_01042 IPR008258 Transglycosylase SLT domain 1 CF65_01042 IPR023664 Murein transglycosylase-C CF65_01042 IPR023346 Lysozyme-like domain superfamily CF65_01043 IPR007457 Fe(II) trafficking protein YggX CF65_01043 IPR036766 Fe(II) trafficking protein YggX superfamily CF65_01044 IPR004035 Endonuclease III, iron-sulphur binding site CF65_01044 IPR004036 Endonuclease III-like, conserved site-2 CF65_01044 IPR003265 HhH-GPD domain CF65_01044 IPR015797 NUDIX hydrolase-like domain superfamily CF65_01044 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CF65_01044 IPR029119 MutY, C-terminal CF65_01044 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CF65_01044 IPR011257 DNA glycosylase CF65_01044 IPR005760 A/G-specific adenine glycosylase MutY CF65_01045 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CF65_01045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01046 IPR007416 Protein of unknown function DUF469 CF65_01048 IPR006059 Bacterial extracellular solute-binding protein CF65_01048 IPR026045 Ferric binding protein CF65_01048 IPR006061 Solute-binding family 1, conserved site CF65_01050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_01050 IPR035906 MetI-like superfamily CF65_01051 IPR015853 ABC transporter, ferric cation import, FbpC CF65_01051 IPR030287 Fe(3+) ions import ATP-binding protein FbpC CF65_01051 IPR003593 AAA+ ATPase domain CF65_01051 IPR003439 ABC transporter-like CF65_01051 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01051 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01051 IPR017871 ABC transporter, conserved site CF65_01053 IPR035587 DUS-like, FMN-binding domain CF65_01053 IPR032886 tRNA-dihydrouridine(16) synthase CF65_01053 IPR013785 Aldolase-type TIM barrel CF65_01053 IPR001269 tRNA-dihydrouridine synthase CF65_01053 IPR018517 tRNA-dihydrouridine synthase, conserved site CF65_01053 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal CF65_01054 IPR032886 tRNA-dihydrouridine(16) synthase CF65_01054 IPR001269 tRNA-dihydrouridine synthase CF65_01054 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal CF65_01054 IPR018517 tRNA-dihydrouridine synthase, conserved site CF65_01054 IPR035587 DUS-like, FMN-binding domain CF65_01054 IPR013785 Aldolase-type TIM barrel CF65_01056 IPR013785 Aldolase-type TIM barrel CF65_01056 IPR032886 tRNA-dihydrouridine(16) synthase CF65_01056 IPR035587 DUS-like, FMN-binding domain CF65_01056 IPR001269 tRNA-dihydrouridine synthase CF65_01056 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal CF65_01056 IPR018517 tRNA-dihydrouridine synthase, conserved site CF65_01057 IPR023749 Co-chaperone DjlA CF65_01057 IPR007791 Co-chaperone DjlA, N-terminal CF65_01057 IPR001623 DnaJ domain CF65_01057 IPR036869 Chaperone J-domain superfamily CF65_01057 IPR029024 TerB-like CF65_01059 IPR023031 Orotate phosphoribosyltransferase CF65_01059 IPR000836 Phosphoribosyltransferase domain CF65_01059 IPR029057 Phosphoribosyltransferase-like CF65_01059 IPR004467 Orotate phosphoribosyl transferase domain CF65_01062 IPR015847 Exoribonuclease, phosphorolytic domain 2 CF65_01062 IPR036345 Exoribonuclease, PH domain 2 superfamily CF65_01062 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_01062 IPR002381 Ribonuclease PH, bacterial-type CF65_01062 IPR001247 Exoribonuclease, phosphorolytic domain 1 CF65_01062 IPR018336 Ribonuclease PH, conserved site CF65_01062 IPR027408 PNPase/RNase PH domain superfamily CF65_01063 IPR005229 Conserved hypothetical protein CHP00255 CF65_01063 IPR013551 Domain of unknown function DUF1732 CF65_01063 IPR013527 YicC-like, N-terminal CF65_01064 IPR017703 YgfZ/GcvT conserved site CF65_01064 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CF65_01064 IPR006222 Aminomethyltransferase, folate-binding domain CF65_01064 IPR028896 Aminomethyltransferase-like CF65_01067 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CF65_01067 IPR018130 Ribosomal protein S2, conserved site CF65_01067 IPR001865 Ribosomal protein S2 CF65_01067 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CF65_01069 IPR001816 Translation elongation factor EFTs/EF1B CF65_01069 IPR009060 UBA-like superfamily CF65_01069 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CF65_01069 IPR018101 Translation elongation factor Ts, conserved site CF65_01069 IPR036402 Elongation factor Ts, dimerisation domain superfamily CF65_01070 IPR012340 Nucleic acid-binding, OB-fold CF65_01070 IPR037278 ARFGAP/RecO-like zinc finger CF65_01070 IPR003717 Recombination protein O, RecO CF65_01070 IPR022572 DNA replication/recombination mediator RecO, N-terminal CF65_01071 IPR010280 (Uracil-5)-methyltransferase family CF65_01071 IPR002792 TRAM domain CF65_01071 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01071 IPR012340 Nucleic acid-binding, OB-fold CF65_01071 IPR030391 RNA methyltransferase TrmA, conserved site CF65_01071 IPR030390 RNA methyltransferase TrmA, active site CF65_01071 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD CF65_01072 IPR004095 TGS CF65_01072 IPR012676 TGS-like CF65_01072 IPR003607 HD/PDEase domain CF65_01072 IPR012675 Beta-grasp domain superfamily CF65_01072 IPR033655 RelA, TGS domain CF65_01072 IPR002912 ACT domain CF65_01072 IPR007685 RelA/SpoT CF65_01072 IPR004811 RelA/SpoT family CF65_01074 IPR036945 Diacylglycerol kinase (DAGK) superfamily CF65_01074 IPR033718 Diacylglycerol kinase, prokaryotic CF65_01074 IPR000829 DAGK family CF65_01077 IPR036397 Ribonuclease H superfamily CF65_01077 IPR012337 Ribonuclease H-like superfamily CF65_01077 IPR025948 HTH-like domain CF65_01077 IPR038965 Transposase InsF-like CF65_01077 IPR001584 Integrase, catalytic core CF65_01078 IPR009061 Putative DNA-binding domain superfamily CF65_01078 IPR000551 MerR-type HTH domain CF65_01078 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator CF65_01079 IPR007922 Protein of unknown function DUF721/UPF0232 CF65_01083 IPR020937 SecA conserved site CF65_01083 IPR011116 SecA Wing/Scaffold CF65_01083 IPR011130 SecA, preprotein cross-linking domain CF65_01083 IPR014018 SecA motor DEAD CF65_01083 IPR011115 SecA DEAD-like, N-terminal CF65_01083 IPR000185 Protein translocase subunit SecA CF65_01083 IPR004027 SEC-C motif CF65_01083 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01083 IPR036266 SecA, Wing/Scaffold superfamily CF65_01083 IPR036670 SecA, preprotein cross-linking domain superfamily CF65_01085 IPR020084 NUDIX hydrolase, conserved site CF65_01085 IPR015797 NUDIX hydrolase-like domain superfamily CF65_01085 IPR020476 NUDIX hydrolase CF65_01085 IPR003561 Mutator MutT CF65_01085 IPR000086 NUDIX hydrolase domain CF65_01087 IPR010372 DNA polymerase III delta, N-terminal CF65_01087 IPR032780 DNA polymerase III subunit delta, C-terminal CF65_01087 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CF65_01087 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01087 IPR005790 DNA polymerase III, delta subunit CF65_01088 IPR007485 LPS-assembly lipoprotein LptE CF65_01090 IPR025709 Leucyl-tRNA synthetase, editing domain CF65_01090 IPR002300 Aminoacyl-tRNA synthetase, class Ia CF65_01090 IPR002302 Leucine-tRNA ligase CF65_01090 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CF65_01090 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CF65_01090 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CF65_01090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01090 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_01095 IPR019722 Glucose-6-phosphate 1-dehydrogenase, bacterial CF65_01096 IPR002934 Polymerase, nucleotidyl transferase domain CF65_01097 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CF65_01098 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CF65_01098 IPR029052 Metallo-dependent phosphatase-like CF65_01098 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CF65_01099 IPR023165 rRNA adenine dimethylase-like CF65_01099 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CF65_01099 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CF65_01099 IPR011530 Ribosomal RNA adenine dimethylase CF65_01099 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01099 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CF65_01101 IPR027304 Trigger factor/SurA domain superfamily CF65_01101 IPR015391 SurA N-terminal CF65_01101 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CF65_01101 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CF65_01102 IPR029057 Phosphoribosyltransferase-like CF65_01102 IPR023050 Bifunctional protein PyrR CF65_01102 IPR000836 Phosphoribosyltransferase domain CF65_01106 IPR035932 HflD-like superfamily CF65_01106 IPR007451 High frequency lysogenization protein HflD CF65_01107 IPR022761 Fumarate lyase, N-terminal CF65_01107 IPR004769 Adenylosuccinate lyase CF65_01107 IPR000362 Fumarate lyase family CF65_01107 IPR013539 Adenylosuccinate lyase PurB, C-terminal CF65_01107 IPR020557 Fumarate lyase, conserved site CF65_01107 IPR024083 Fumarase/histidase, N-terminal CF65_01107 IPR008948 L-Aspartase-like CF65_01109 IPR036291 NAD(P)-binding domain superfamily CF65_01109 IPR020904 Short-chain dehydrogenase/reductase, conserved site CF65_01109 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01111 IPR009061 Putative DNA-binding domain superfamily CF65_01111 IPR000551 MerR-type HTH domain CF65_01113 IPR009061 Putative DNA-binding domain superfamily CF65_01113 IPR000551 MerR-type HTH domain CF65_01114 IPR013154 Alcohol dehydrogenase, N-terminal CF65_01114 IPR014183 Alcohol dehydrogenase class III CF65_01114 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CF65_01114 IPR011032 GroES-like superfamily CF65_01114 IPR036291 NAD(P)-binding domain superfamily CF65_01114 IPR020843 Polyketide synthase, enoylreductase domain CF65_01114 IPR013149 Alcohol dehydrogenase, C-terminal CF65_01115 IPR029058 Alpha/Beta hydrolase fold CF65_01115 IPR000801 Putative esterase CF65_01115 IPR014186 S-formylglutathione hydrolase CF65_01117 IPR004780 Signal recognition particle protein CF65_01117 IPR022941 Signal recognition particle, SRP54 subunit CF65_01117 IPR013822 Signal recognition particle SRP54, helical bundle CF65_01117 IPR003593 AAA+ ATPase domain CF65_01117 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01117 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CF65_01117 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CF65_01117 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CF65_01117 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CF65_01120 IPR002541 Cytochrome c assembly protein CF65_01123 IPR005170 Transporter-associated domain CF65_01123 IPR000644 CBS domain CF65_01123 IPR002550 CNNM, transmembrane domain CF65_01123 IPR016169 FAD-binding, type PCMH, subdomain 2 CF65_01123 IPR036318 FAD-binding, type PCMH-like superfamily CF65_01124 IPR002898 MotA/TolQ/ExbB proton channel CF65_01124 IPR014172 TonB-system energizer ExbB type-2 CF65_01127 IPR003538 Gram-negative bacterial TonB protein CF65_01127 IPR006260 TonB/TolA, C-terminal CF65_01127 IPR037682 TonB, C-terminal CF65_01132 IPR041533 Bartonella effector protein, BID domain CF65_01132 IPR003812 Fido domain CF65_01132 IPR036597 Fido-like domain superfamily CF65_01133 IPR003812 Fido domain CF65_01133 IPR036597 Fido-like domain superfamily CF65_01133 IPR041533 Bartonella effector protein, BID domain CF65_01137 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE CF65_01137 IPR006657 Molybdopterin dinucleotide-binding domain CF65_01137 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CF65_01137 IPR006311 Twin-arginine translocation pathway, signal sequence CF65_01137 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CF65_01137 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CF65_01137 IPR006656 Molybdopterin oxidoreductase CF65_01137 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CF65_01137 IPR009010 Aspartate decarboxylase-like domain superfamily CF65_01138 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_01138 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_01138 IPR014297 Dimethylsulphoxide reductase, chain B CF65_01140 IPR007059 DMSO reductase anchor subunit (DmsC) CF65_01141 IPR028611 Tat proofreading chaperone DmsD CF65_01141 IPR026269 Tat proofreading chaperone DmsD-type CF65_01141 IPR020945 DMSO/Nitrate reductase chaperone CF65_01141 IPR036411 TorD-like superfamily CF65_01145 IPR006194 Glycine-tRNA synthetase, heterodimeric CF65_01145 IPR002310 Glycine-tRNA ligase, alpha subunit CF65_01146 IPR036249 Thioredoxin-like superfamily CF65_01146 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related CF65_01149 IPR006194 Glycine-tRNA synthetase, heterodimeric CF65_01149 IPR015944 Glycine-tRNA ligase, beta subunit CF65_01149 IPR008909 DALR anticodon binding CF65_01151 IPR001731 Delta-aminolevulinic acid dehydratase CF65_01151 IPR030656 Delta-aminolevulinic acid dehydratase, active site CF65_01151 IPR013785 Aldolase-type TIM barrel CF65_01152 IPR019820 Sec-independent periplasmic protein translocase, conserved site CF65_01152 IPR002033 Sec-independent periplasmic protein translocase TatC CF65_01153 IPR018448 Twin-arginine translocation protein TatB CF65_01154 IPR006312 Sec-independent protein translocase protein TatA/E CF65_01154 IPR003369 Sec-independent protein translocase protein TatA/B/E CF65_01156 IPR016154 Heat shock protein Hsp33, C-terminal CF65_01156 IPR016153 Heat shock protein Hsp33, N-terminal CF65_01156 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CF65_01156 IPR000397 Heat shock protein Hsp33 CF65_01158 IPR036986 RNA-binding S4 domain superfamily CF65_01158 IPR002942 RNA-binding S4 domain CF65_01158 IPR025708 Heat shock protein 15 CF65_01159 IPR036412 HAD-like superfamily CF65_01159 IPR023214 HAD superfamily CF65_01159 IPR041492 Haloacid dehalogenase-like hydrolase CF65_01159 IPR006439 HAD hydrolase, subfamily IA CF65_01160 IPR000086 NUDIX hydrolase domain CF65_01160 IPR015797 NUDIX hydrolase-like domain superfamily CF65_01160 IPR020084 NUDIX hydrolase, conserved site CF65_01161 IPR014710 RmlC-like jelly roll fold CF65_01161 IPR018060 DNA binding HTH domain, AraC-type CF65_01161 IPR037923 Transcription regulator HTH-like CF65_01161 IPR003313 AraC-type arabinose-binding/dimerisation domain CF65_01161 IPR009057 Homeobox-like domain superfamily CF65_01161 IPR020449 Transcription regulator HTH, AraC- type CF65_01161 IPR018062 HTH domain AraC-type, conserved site CF65_01162 IPR007339 Inner membrane protein RclC-like CF65_01164 IPR004813 Oligopeptide transporter, OPT superfamily CF65_01164 IPR004814 Oligopeptide transporter OPT CF65_01166 IPR000760 Inositol monophosphatase-like CF65_01166 IPR020550 Inositol monophosphatase, conserved site CF65_01166 IPR020583 Inositol monophosphatase, metal-binding site CF65_01166 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ CF65_01167 IPR001282 Glucose-6-phosphate dehydrogenase CF65_01167 IPR019796 Glucose-6-phosphate dehydrogenase, active site CF65_01167 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CF65_01167 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CF65_01167 IPR036291 NAD(P)-binding domain superfamily CF65_01168 IPR037171 NagB/RpiA transferase-like CF65_01168 IPR005900 6-phosphogluconolactonase, DevB-type CF65_01168 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CF65_01168 IPR039104 6-Phosphogluconolactonase CF65_01171 IPR018187 Asp/Glu racemase, active site 1 CF65_01171 IPR004380 Aspartate racemase CF65_01171 IPR015942 Asp/Glu/hydantoin racemase CF65_01171 IPR033134 Asp/Glu racemase, active site 2 CF65_01171 IPR001920 Asp/Glu racemase CF65_01172 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related CF65_01172 IPR036249 Thioredoxin-like superfamily CF65_01175 IPR036291 NAD(P)-binding domain superfamily CF65_01175 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CF65_01175 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CF65_01175 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CF65_01175 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating CF65_01175 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CF65_01175 IPR006184 6-phosphogluconate-binding site CF65_01175 IPR006183 6-phosphogluconate dehydrogenase CF65_01177 IPR014030 Beta-ketoacyl synthase, N-terminal CF65_01177 IPR014031 Beta-ketoacyl synthase, C-terminal CF65_01177 IPR018201 Beta-ketoacyl synthase, active site CF65_01177 IPR000794 Beta-ketoacyl synthase CF65_01177 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CF65_01177 IPR016039 Thiolase-like CF65_01177 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CF65_01179 IPR036291 NAD(P)-binding domain superfamily CF65_01179 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01179 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative CF65_01182 IPR014031 Beta-ketoacyl synthase, C-terminal CF65_01182 IPR000794 Beta-ketoacyl synthase CF65_01182 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CF65_01182 IPR014030 Beta-ketoacyl synthase, N-terminal CF65_01182 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CF65_01182 IPR016039 Thiolase-like CF65_01182 IPR018201 Beta-ketoacyl synthase, active site CF65_01195 IPR036736 ACP-like superfamily CF65_01195 IPR003231 Acyl carrier protein (ACP) CF65_01195 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CF65_01195 IPR009081 Phosphopantetheine binding ACP domain CF65_01195 IPR006162 Phosphopantetheine attachment site CF65_01201 IPR006439 HAD hydrolase, subfamily IA CF65_01201 IPR041492 Haloacid dehalogenase-like hydrolase CF65_01201 IPR023214 HAD superfamily CF65_01201 IPR036412 HAD-like superfamily CF65_01202 IPR023009 Tyrosine recombinase XerC/XerD CF65_01202 IPR011931 Tyrosine recombinase XerC CF65_01202 IPR004107 Integrase, SAM-like, N-terminal CF65_01202 IPR002104 Integrase, catalytic domain CF65_01202 IPR013762 Integrase-like, catalytic domain superfamily CF65_01202 IPR011010 DNA breaking-rejoining enzyme, catalytic core CF65_01202 IPR010998 Integrase/recombinase, N-terminal CF65_01203 IPR001653 Diaminopimelate epimerase, DapF CF65_01203 IPR018510 Diaminopimelate epimerase, active site CF65_01206 IPR036676 PurM-like, C-terminal domain superfamily CF65_01206 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CF65_01206 IPR036921 PurM-like, N-terminal domain superfamily CF65_01206 IPR016188 PurM-like, N-terminal domain CF65_01206 IPR010918 PurM-like, C-terminal domain CF65_01209 IPR031939 Surface-adhesin protein E-like CF65_01209 IPR016595 Surface-adhesin protein E, Pasteurellaceae CF65_01211 IPR004176 Clp, N-terminal CF65_01211 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01211 IPR017730 Chaperonin ClpB CF65_01211 IPR003959 ATPase, AAA-type, core CF65_01211 IPR018368 ClpA/B, conserved site 1 CF65_01211 IPR001270 ClpA/B family CF65_01211 IPR036628 Clp, N-terminal domain superfamily CF65_01211 IPR003593 AAA+ ATPase domain CF65_01211 IPR019489 Clp ATPase, C-terminal CF65_01211 IPR041546 ClpA/ClpB, AAA lid domain CF65_01211 IPR028299 ClpA/B, conserved site 2 CF65_01213 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CF65_01213 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CF65_01213 IPR004787 Competence protein ComEA CF65_01213 IPR010994 RuvA domain 2-like CF65_01213 IPR019554 Soluble ligand binding domain CF65_01215 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CF65_01215 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type CF65_01215 IPR012080 Aspartate-semialdehyde dehydrogenase CF65_01215 IPR036291 NAD(P)-binding domain superfamily CF65_01215 IPR000534 Semialdehyde dehydrogenase, NAD-binding CF65_01215 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CF65_01216 IPR006379 HAD-superfamily hydrolase, subfamily IIB CF65_01216 IPR036412 HAD-like superfamily CF65_01216 IPR000150 Cof family CF65_01216 IPR023214 HAD superfamily CF65_01220 IPR005222 Competence protein ComF CF65_01220 IPR000836 Phosphoribosyltransferase domain CF65_01220 IPR029057 Phosphoribosyltransferase-like CF65_01221 IPR017726 Fe/S biogenesis protein NfuA CF65_01221 IPR000361 FeS cluster biogenesis CF65_01221 IPR035903 HesB-like domain superfamily CF65_01221 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CF65_01221 IPR034904 Fe-S cluster assembly domain superfamily CF65_01222 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CF65_01222 IPR023019 Histidine biosynthesis bifunctional protein HisIE CF65_01222 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CF65_01222 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CF65_01222 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily CF65_01223 IPR004685 Branched-chain amino acid transport system II carrier protein CF65_01224 IPR004468 CTP synthase CF65_01224 IPR017456 CTP synthase, N-terminal CF65_01224 IPR017926 Glutamine amidotransferase CF65_01224 IPR033828 CTP synthase GATase domain CF65_01224 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01224 IPR029062 Class I glutamine amidotransferase-like CF65_01226 IPR002686 Transposase IS200-like CF65_01226 IPR036515 Transposase IS200-like superfamily CF65_01228 IPR005745 Ribosomal protein L14P, bacterial-type CF65_01228 IPR036853 Ribosomal protein L14 superfamily CF65_01228 IPR019972 Ribosomal protein L14P, conserved site CF65_01228 IPR000218 Ribosomal protein L14P CF65_01229 IPR008991 Translation protein SH3-like domain superfamily CF65_01229 IPR005825 Ribosomal protein L24/L26, conserved site CF65_01229 IPR005824 KOW CF65_01229 IPR041988 Ribosomal Protein L26/L24, KOW domain CF65_01229 IPR014722 Ribosomal protein L2, domain 2 CF65_01229 IPR003256 Ribosomal protein L24 CF65_01230 IPR031309 Ribosomal protein L5, C-terminal CF65_01230 IPR031310 Ribosomal protein L5, N-terminal CF65_01230 IPR020929 Ribosomal protein L5, conserved site CF65_01230 IPR022803 Ribosomal protein L5 domain superfamily CF65_01230 IPR002132 Ribosomal protein L5 CF65_01230 IPR020930 Ribosomal protein L5, bacterial-type CF65_01231 IPR018271 Ribosomal protein S14, conserved site CF65_01231 IPR001209 Ribosomal protein S14 CF65_01231 IPR023036 Ribosomal protein S14, bacterial/plastid CF65_01232 IPR000630 Ribosomal protein S8 CF65_01232 IPR035987 Ribosomal protein S8 superfamily CF65_01233 IPR002358 Ribosomal protein L6, conserved site CF65_01233 IPR019906 Ribosomal protein L6, bacterial-type CF65_01233 IPR000702 Ribosomal protein L6 CF65_01233 IPR020040 Ribosomal protein L6, alpha-beta domain CF65_01233 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CF65_01234 IPR004389 Ribosomal protein L18, bacterial-type CF65_01234 IPR005484 Ribosomal protein L18 CF65_01235 IPR005324 Ribosomal protein S5, C-terminal CF65_01235 IPR000851 Ribosomal protein S5 CF65_01235 IPR018192 Ribosomal protein S5, N-terminal, conserved site CF65_01235 IPR013810 Ribosomal protein S5, N-terminal CF65_01235 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_01235 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_01235 IPR005712 Ribosomal protein S5, bacterial-type CF65_01236 IPR021131 Ribosomal protein L18e/L15P CF65_01236 IPR001196 Ribosomal protein L15, conserved site CF65_01236 IPR005749 Ribosomal protein L15, bacterial-type CF65_01236 IPR030878 Ribosomal protein L15 CF65_01236 IPR036227 Ribosomal L18e/L15P superfamily CF65_01237 IPR026593 Protein translocase subunit SecY CF65_01237 IPR002208 SecY/SEC61-alpha family CF65_01237 IPR023201 SecY domain superfamily CF65_01237 IPR030659 SecY conserved site CF65_01238 IPR035977 Ribosomal protein L36 superfamily CF65_01238 IPR000473 Ribosomal protein L36 CF65_01239 IPR027437 30s ribosomal protein S13, C-terminal CF65_01239 IPR018269 Ribosomal protein S13, conserved site CF65_01239 IPR019980 Ribosomal protein S13, bacterial-type CF65_01239 IPR010979 Ribosomal protein S13-like, H2TH CF65_01239 IPR001892 Ribosomal protein S13 CF65_01240 IPR001971 Ribosomal protein S11 CF65_01240 IPR019981 Ribosomal protein S11, bacterial-type CF65_01240 IPR036967 Ribosomal protein S11 superfamily CF65_01240 IPR018102 Ribosomal S11, conserved site CF65_01241 IPR022801 Ribosomal protein S4/S9 CF65_01241 IPR001912 Ribosomal protein S4/S9, N-terminal CF65_01241 IPR005709 Ribosomal protein S4, bacterial-type CF65_01241 IPR018079 Ribosomal protein S4, conserved site CF65_01241 IPR002942 RNA-binding S4 domain CF65_01241 IPR036986 RNA-binding S4 domain superfamily CF65_01242 IPR011260 RNA polymerase, alpha subunit, C-terminal CF65_01242 IPR011773 DNA-directed RNA polymerase, alpha subunit CF65_01242 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CF65_01242 IPR011262 DNA-directed RNA polymerase, insert domain CF65_01242 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CF65_01242 IPR036603 RNA polymerase, RBP11-like subunit CF65_01243 IPR036373 Ribosomal protein L17 superfamily CF65_01243 IPR000456 Ribosomal protein L17 CF65_01244 IPR036515 Transposase IS200-like superfamily CF65_01244 IPR002686 Transposase IS200-like CF65_01245 IPR013061 Tryptophan/tryrosine permease, conserved site CF65_01245 IPR013059 Tryptophan/tyrosine transporter CF65_01245 IPR018227 Amino acid/polyamine transporter 2 CF65_01249 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CF65_01249 IPR017056 Phosphoesterase, HI0762, predicted CF65_01250 IPR006417 Nicotinamide-nucleotide adenylyltransferase CF65_01250 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain CF65_01250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01250 IPR016429 NAD biosynthesis/regulator protein NadR CF65_01250 IPR004821 Cytidyltransferase-like domain CF65_01250 IPR038727 NadR/Ttd14, AAA domain CF65_01252 IPR022931 Sulfur carrier protein TusA CF65_01252 IPR001455 TusA-like domain CF65_01252 IPR036868 TusA-like domain superfamily CF65_01254 IPR001498 Impact, N-terminal CF65_01254 IPR035647 EF-G domain III/V-like CF65_01254 IPR023582 Impact family CF65_01254 IPR015796 Impact family, bacterial/archaeal CF65_01254 IPR036956 Impact, N-terminal domain superfamily CF65_01254 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CF65_01254 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CF65_01254 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_01258 IPR003445 Cation transporter CF65_01258 IPR004772 TrkH potassium transport family CF65_01259 IPR026816 Flavodoxin domain CF65_01259 IPR001226 Flavodoxin, conserved site CF65_01259 IPR029039 Flavoprotein-like superfamily CF65_01259 IPR008254 Flavodoxin/nitric oxide synthase CF65_01264 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CF65_01265 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CF65_01268 IPR025948 HTH-like domain CF65_01268 IPR038965 Transposase InsF-like CF65_01268 IPR036397 Ribonuclease H superfamily CF65_01268 IPR012337 Ribonuclease H-like superfamily CF65_01268 IPR001584 Integrase, catalytic core CF65_01273 IPR038750 Uncharacterized protein YczE/YyaS-like CF65_01276 IPR002201 Glycosyl transferase, family 9 CF65_01277 IPR004708 Aspartate ammonia-lyase CF65_01277 IPR018951 Fumarase C, C-terminal CF65_01277 IPR024083 Fumarase/histidase, N-terminal CF65_01277 IPR000362 Fumarate lyase family CF65_01277 IPR022761 Fumarate lyase, N-terminal CF65_01277 IPR008948 L-Aspartase-like CF65_01277 IPR020557 Fumarate lyase, conserved site CF65_01280 IPR020818 GroES chaperonin family CF65_01280 IPR037124 GroES chaperonin superfamily CF65_01280 IPR018369 Chaperonin GroES, conserved site CF65_01280 IPR011032 GroES-like superfamily CF65_01284 IPR018370 Chaperonin Cpn60, conserved site CF65_01284 IPR001844 Chaperonin Cpn60 CF65_01284 IPR002423 Chaperonin Cpn60/TCP-1 family CF65_01284 IPR027413 GroEL-like equatorial domain superfamily CF65_01284 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CF65_01284 IPR027409 GroEL-like apical domain superfamily CF65_01286 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CF65_01286 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CF65_01286 IPR036291 NAD(P)-binding domain superfamily CF65_01286 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CF65_01286 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CF65_01287 IPR012337 Ribonuclease H-like superfamily CF65_01287 IPR036397 Ribonuclease H superfamily CF65_01287 IPR001584 Integrase, catalytic core CF65_01287 IPR038965 Transposase InsF-like CF65_01287 IPR025948 HTH-like domain CF65_01291 IPR003439 ABC transporter-like CF65_01291 IPR017871 ABC transporter, conserved site CF65_01291 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01291 IPR004602 UvrABC system subunit A CF65_01291 IPR041552 UvrA DNA-binding domain CF65_01291 IPR041102 UvrA, interaction domain CF65_01292 IPR011344 Single-stranded DNA-binding protein CF65_01292 IPR000424 Primosome PriB/single-strand DNA-binding CF65_01292 IPR012340 Nucleic acid-binding, OB-fold CF65_01294 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_01294 IPR023095 Adenine-specific methyltransferase, domain 2 CF65_01294 IPR012263 Adenine modification methylase, M.EcoRV-type CF65_01294 IPR012327 D12 class N6 adenine-specific DNA methyltransferase CF65_01294 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01295 IPR016037 3-dehydroquinate synthase AroB CF65_01295 IPR030960 3-dehydroquinate synthase domain CF65_01295 IPR030963 3-dehydroquinate synthase family CF65_01296 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01296 IPR031322 Shikimate kinase/gluconokinase CF65_01296 IPR000623 Shikimate kinase/Threonine synthase-like 1 CF65_01296 IPR023000 Shikimate kinase, conserved site CF65_01297 IPR004845 Type II secretion system GspD, conserved site CF65_01297 IPR004846 Type II/III secretion system CF65_01297 IPR038591 NolW-like superfamily CF65_01297 IPR013355 Type IV pilus secretin PilQ CF65_01297 IPR001775 GspD/PilQ family CF65_01297 IPR005644 NolW-like CF65_01303 IPR005883 Type IV pilus assembly protein PilM CF65_01304 IPR001264 Glycosyl transferase, family 51 CF65_01304 IPR012338 Beta-lactamase/transpeptidase-like CF65_01304 IPR036950 Penicillin binding protein transglycosylase domain CF65_01304 IPR001460 Penicillin-binding protein, transpeptidase CF65_01304 IPR023346 Lysozyme-like domain superfamily CF65_01304 IPR031376 Penicillin-binding protein, OB-like domain CF65_01305 IPR007473 Ribosomal RNA large subunit methyltransferase J CF65_01305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01306 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01306 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CF65_01306 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CF65_01306 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF65_01306 IPR023753 FAD/NAD(P)-binding domain CF65_01306 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CF65_01306 IPR006322 Glutathione reductase, eukaryote/bacterial CF65_01308 IPR018490 Cyclic nucleotide-binding-like CF65_01308 IPR036390 Winged helix DNA-binding domain superfamily CF65_01308 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01308 IPR018335 Transcription regulator HTH, Crp-type, conserved site CF65_01308 IPR014710 RmlC-like jelly roll fold CF65_01308 IPR012318 Crp-type HTH domain CF65_01308 IPR018488 Cyclic nucleotide-binding, conserved site CF65_01308 IPR000595 Cyclic nucleotide-binding domain CF65_01310 IPR010648 Uncharacterised protein family UPF0270 CF65_01310 IPR036685 YehU-like superfamily CF65_01311 IPR009057 Homeobox-like domain superfamily CF65_01311 IPR001647 DNA-binding HTH domain, TetR-type CF65_01311 IPR023769 Nucleoid occlusion factor SlmA CF65_01311 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CF65_01313 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CF65_01313 IPR036157 dUTPase-like superfamily CF65_01313 IPR029054 dUTPase-like CF65_01313 IPR033704 dUTPase, trimeric CF65_01315 IPR036551 Flavin prenyltransferase-like CF65_01315 IPR035929 CoaB-like superfamily CF65_01315 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CF65_01315 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CF65_01315 IPR003382 Flavoprotein CF65_01317 IPR020891 Uncharacterised protein family UPF0758, conserved site CF65_01317 IPR037518 MPN domain CF65_01317 IPR025657 RadC-like JAB domain CF65_01317 IPR010994 RuvA domain 2-like CF65_01317 IPR001405 Uncharacterised protein family UPF0758 CF65_01319 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CF65_01319 IPR036286 LexA/Signal peptidase-like superfamily CF65_01319 IPR039418 LexA-like CF65_01319 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_01319 IPR001387 Cro/C1-type helix-turn-helix domain CF65_01321 IPR001405 Uncharacterised protein family UPF0758 CF65_01321 IPR020891 Uncharacterised protein family UPF0758, conserved site CF65_01321 IPR010994 RuvA domain 2-like CF65_01321 IPR025657 RadC-like JAB domain CF65_01321 IPR037518 MPN domain CF65_01323 IPR026569 Ribosomal protein L28/L24 CF65_01323 IPR037147 Ribosomal protein L28/L24 superfamily CF65_01323 IPR034704 L28p-like CF65_01323 IPR001383 Ribosomal protein L28 CF65_01324 IPR038584 Ribosomal protein L33 superfamily CF65_01324 IPR011332 Zinc-binding ribosomal protein CF65_01324 IPR001705 Ribosomal protein L33 CF65_01324 IPR018264 Ribosomal protein L33, conserved site CF65_01325 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CF65_01325 IPR035937 MutM-like, N-terminal CF65_01325 IPR010979 Ribosomal protein S13-like, H2TH CF65_01325 IPR020629 Formamidopyrimidine-DNA glycosylase CF65_01325 IPR010663 Zinc finger, FPG/IleRS-type CF65_01325 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CF65_01325 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CF65_01325 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CF65_01330 IPR002654 Glycosyl transferase, family 25 CF65_01331 IPR027491 Ribosomal protein L31 type A CF65_01331 IPR002150 Ribosomal protein L31 CF65_01331 IPR034704 L28p-like CF65_01331 IPR042105 Ribosomal protein L31 superfamily CF65_01332 IPR002654 Glycosyl transferase, family 25 CF65_01334 IPR011735 HtrL protein CF65_01335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01335 IPR001650 Helicase, C-terminal CF65_01335 IPR011545 DEAD/DEAH box helicase domain CF65_01335 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_01335 IPR041222 Primosomal protein N', 3' DNA-binding domain CF65_01335 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily CF65_01335 IPR005259 Primosomal protein N' CF65_01335 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain CF65_01335 IPR041236 Primosomal protein N, C-terminal domain CF65_01337 IPR036680 Sporulation-like domain superfamily CF65_01337 IPR007730 Sporulation-like domain CF65_01339 IPR001647 DNA-binding HTH domain, TetR-type CF65_01339 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CF65_01339 IPR009057 Homeobox-like domain superfamily CF65_01340 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CF65_01340 IPR006143 RND efflux pump, membrane fusion protein CF65_01341 IPR001036 Acriflavin resistance protein CF65_01341 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CF65_01342 IPR041698 Methyltransferase domain 25 CF65_01342 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01344 IPR004488 Magnesium/cobalt transport protein CorA CF65_01344 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CF65_01345 IPR003425 CCB3/YggT CF65_01347 IPR005228 Conserved hypothetical protein CHP00251 CF65_01347 IPR036591 YggU-like superfamily CF65_01347 IPR003746 Protein of unknown function DUF167 CF65_01349 IPR029479 Nitroreductase CF65_01349 IPR000415 Nitroreductase-like CF65_01349 IPR033878 Nitroreductase NfsB-like CF65_01351 IPR017850 Alkaline-phosphatase-like, core domain superfamily CF65_01351 IPR012160 Lipoteichoic acid synthase-like CF65_01351 IPR000917 Sulfatase, N-terminal CF65_01355 IPR002942 RNA-binding S4 domain CF65_01355 IPR036986 RNA-binding S4 domain superfamily CF65_01355 IPR006145 Pseudouridine synthase, RsuA/RluA CF65_01355 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CF65_01355 IPR006225 Pseudouridine synthase, RluC/RluD CF65_01355 IPR020103 Pseudouridine synthase, catalytic domain superfamily CF65_01356 IPR017689 Outer membrane protein assembly factor BamD CF65_01356 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_01356 IPR019734 Tetratricopeptide repeat CF65_01356 IPR039565 Outer membrane lipoprotein BamD-like CF65_01357 IPR002698 5-formyltetrahydrofolate cyclo-ligase CF65_01357 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CF65_01357 IPR037171 NagB/RpiA transferase-like CF65_01358 IPR007838 Cell division protein ZapA-like CF65_01358 IPR036192 Cell division protein ZapA-like superfamily CF65_01359 IPR011978 Uncharacterised protein family UPF0149 CF65_01359 IPR036255 YgfB-like superfamily CF65_01360 IPR036005 Creatinase/aminopeptidase-like CF65_01360 IPR000994 Peptidase M24 CF65_01360 IPR007865 Aminopeptidase P, N-terminal CF65_01360 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CF65_01360 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CF65_01365 IPR023803 Ribosomal protein S16 domain superfamily CF65_01365 IPR000307 Ribosomal protein S16 CF65_01365 IPR020592 Ribosomal protein S16, conserved site CF65_01366 IPR009000 Translation protein, beta-barrel domain superfamily CF65_01366 IPR036976 RimM, N-terminal domain superfamily CF65_01366 IPR011961 16S rRNA processing protein RimM CF65_01366 IPR027275 PRC-barrel domain CF65_01366 IPR011033 PRC-barrel-like superfamily CF65_01366 IPR002676 RimM, N-terminal CF65_01367 IPR029028 Alpha/beta knot methyltransferases CF65_01367 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CF65_01367 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CF65_01367 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CF65_01367 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_01368 IPR018257 Ribosomal protein L19, conserved site CF65_01368 IPR001857 Ribosomal protein L19 CF65_01368 IPR008991 Translation protein SH3-like domain superfamily CF65_01368 IPR038657 Ribosomal protein L19 superfamily CF65_01369 IPR026034 Cell shape-determining protein MreD, proteobacterial type CF65_01369 IPR007227 Cell shape-determining protein MreD CF65_01370 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 CF65_01370 IPR007221 Rod shape-determining protein MreC CF65_01370 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 CF65_01371 IPR004753 Cell shape determining protein MreB CF65_01372 IPR003029 S1 domain CF65_01372 IPR012340 Nucleic acid-binding, OB-fold CF65_01372 IPR013668 Ribonuclease R winged-helix domain CF65_01372 IPR011129 Cold shock domain CF65_01372 IPR022967 RNA-binding domain, S1 CF65_01372 IPR040476 RNase II/RNase R, cold shock domain CF65_01372 IPR011805 Ribonuclease R CF65_01372 IPR013223 Ribonuclease B, N-terminal OB domain CF65_01372 IPR004476 Ribonuclease II/ribonuclease R CF65_01372 IPR022966 Ribonuclease II/R, conserved site CF65_01372 IPR001900 Ribonuclease II/R CF65_01374 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CF65_01374 IPR001537 tRNA/rRNA methyltransferase, SpoU type CF65_01374 IPR029064 50S ribosomal protein L30e-like CF65_01374 IPR029028 Alpha/beta knot methyltransferases CF65_01374 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CF65_01374 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_01374 IPR004441 RNA methyltransferase TrmH family CF65_01378 IPR000849 Sugar phosphate transporter CF65_01378 IPR021159 Glycerate/sugar phosphate transporter, conserved site CF65_01378 IPR036259 MFS transporter superfamily CF65_01378 IPR011701 Major facilitator superfamily CF65_01378 IPR005267 Glycerol-3-phosphate transporter CF65_01378 IPR020846 Major facilitator superfamily domain CF65_01379 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CF65_01379 IPR030395 Glycerophosphodiester phosphodiesterase domain CF65_01383 IPR041614 DprA, winged helix domain CF65_01383 IPR003488 DNA recombination-mediator protein A CF65_01383 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01385 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CF65_01385 IPR020070 Ribosomal protein L9, N-terminal CF65_01385 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CF65_01385 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CF65_01385 IPR000244 Ribosomal protein L9 CF65_01385 IPR020594 Ribosomal protein L9, bacteria/chloroplast CF65_01385 IPR020069 Ribosomal protein L9, C-terminal CF65_01386 IPR036870 Ribosomal protein S18 superfamily CF65_01386 IPR018275 Ribosomal protein S18, conserved site CF65_01386 IPR001648 Ribosomal protein S18 CF65_01387 IPR000424 Primosome PriB/single-strand DNA-binding CF65_01387 IPR012340 Nucleic acid-binding, OB-fold CF65_01387 IPR023646 Primosomal replication protein PriB CF65_01388 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CF65_01388 IPR020815 Ribosomal protein S6, conserved site CF65_01388 IPR000529 Ribosomal protein S6 CF65_01388 IPR035980 Ribosomal protein S6 superfamily CF65_01388 IPR020814 Ribosomal protein S6, plastid/chloroplast CF65_01390 IPR006199 LexA repressor, DNA-binding domain CF65_01390 IPR006197 Peptidase S24, LexA-like CF65_01390 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_01390 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01390 IPR036390 Winged helix DNA-binding domain superfamily CF65_01390 IPR006200 Transcription regulator LexA CF65_01390 IPR039418 LexA-like CF65_01390 IPR036286 LexA/Signal peptidase-like superfamily CF65_01391 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB CF65_01391 IPR041728 GPAT/DHAPAT, acyltransferase domain CF65_01391 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase CF65_01391 IPR002123 Phospholipid/glycerol acyltransferase CF65_01393 IPR003593 AAA+ ATPase domain CF65_01393 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01393 IPR011527 ABC transporter type 1, transmembrane domain CF65_01393 IPR036640 ABC transporter type 1, transmembrane domain superfamily CF65_01393 IPR003439 ABC transporter-like CF65_01393 IPR039421 Type I protein exporter CF65_01393 IPR017871 ABC transporter, conserved site CF65_01394 IPR014710 RmlC-like jelly roll fold CF65_01394 IPR003313 AraC-type arabinose-binding/dimerisation domain CF65_01394 IPR009057 Homeobox-like domain superfamily CF65_01394 IPR037923 Transcription regulator HTH-like CF65_01394 IPR018060 DNA binding HTH domain, AraC-type CF65_01394 IPR018062 HTH domain AraC-type, conserved site CF65_01394 IPR020449 Transcription regulator HTH, AraC- type CF65_01395 IPR004675 Alkylhydroperoxidase AhpD core CF65_01395 IPR029032 AhpD-like CF65_01395 IPR003779 Carboxymuconolactone decarboxylase-like CF65_01396 IPR002201 Glycosyl transferase, family 9 CF65_01398 IPR011009 Protein kinase-like domain superfamily CF65_01398 IPR022826 3-deoxy-D-manno-octulosonic acid kinase CF65_01400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01400 IPR004821 Cytidyltransferase-like domain CF65_01400 IPR001980 Phosphopantetheine adenylyltransferase CF65_01401 IPR001296 Glycosyl transferase, family 1 CF65_01401 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily CF65_01401 IPR039901 3-deoxy-D-manno-octulosonic acid transferase CF65_01401 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CF65_01402 IPR001173 Glycosyltransferase 2-like CF65_01402 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01407 IPR018392 LysM domain CF65_01407 IPR011055 Duplicated hybrid motif CF65_01407 IPR036779 LysM domain superfamily CF65_01407 IPR016047 Peptidase M23 CF65_01409 IPR032816 SNARE associated Golgi protein CF65_01411 IPR036523 SurE-like phosphatase/nucleotidase superfamily CF65_01411 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CF65_01411 IPR030048 Survival protein SurE CF65_01413 IPR020103 Pseudouridine synthase, catalytic domain superfamily CF65_01413 IPR042214 Pseudouridine synthase, TruD, catalytic domain CF65_01413 IPR020119 Pseudouridine synthase TruD, conserved site CF65_01413 IPR011760 Pseudouridine synthase, TruD, insertion domain CF65_01413 IPR001656 Pseudouridine synthase, TruD CF65_01416 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CF65_01416 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CF65_01416 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily CF65_01417 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01417 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CF65_01417 IPR034683 Cytidylyltransferase IspD/TarI CF65_01417 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CF65_01418 IPR007060 Septum formation initiator FtsL/DivIC CF65_01418 IPR023081 Cell division protein FtsB CF65_01419 IPR013785 Aldolase-type TIM barrel CF65_01419 IPR026019 Ribulose-phosphate 3-epimerase CF65_01419 IPR000056 Ribulose-phosphate 3-epimerase-like CF65_01419 IPR011060 Ribulose-phosphate binding barrel CF65_01421 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CF65_01421 IPR006439 HAD hydrolase, subfamily IA CF65_01421 IPR036412 HAD-like superfamily CF65_01421 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CF65_01421 IPR041492 Haloacid dehalogenase-like hydrolase CF65_01421 IPR037512 Phosphoglycolate phosphatase, prokaryotic CF65_01421 IPR023214 HAD superfamily CF65_01422 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01422 IPR017871 ABC transporter, conserved site CF65_01422 IPR005286 Cell division protein FtsE, ATP-binding CF65_01422 IPR003593 AAA+ ATPase domain CF65_01422 IPR003439 ABC transporter-like CF65_01423 IPR004513 Cell division protein FtsX CF65_01423 IPR040690 FtsX, extracellular domain CF65_01424 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_01424 IPR005787 Threonine dehydratase, biosynthetic CF65_01424 IPR038110 Threonine dehydratase, ACT-like domain superfamily CF65_01424 IPR001721 Threonine dehydratase, ACT-like domain CF65_01424 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CF65_01424 IPR001926 Pyridoxal-phosphate dependent enzyme CF65_01426 IPR001926 Pyridoxal-phosphate dependent enzyme CF65_01426 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CF65_01426 IPR038110 Threonine dehydratase, ACT-like domain superfamily CF65_01426 IPR005787 Threonine dehydratase, biosynthetic CF65_01426 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_01426 IPR001721 Threonine dehydratase, ACT-like domain CF65_01428 IPR029061 Thiamin diphosphate-binding fold CF65_01428 IPR012000 Thiamine pyrophosphate enzyme, central domain CF65_01428 IPR029035 DHS-like NAD/FAD-binding domain superfamily CF65_01428 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CF65_01429 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CF65_01429 IPR029061 Thiamin diphosphate-binding fold CF65_01431 IPR006379 HAD-superfamily hydrolase, subfamily IIB CF65_01431 IPR036412 HAD-like superfamily CF65_01431 IPR000150 Cof family CF65_01432 IPR022742 Serine aminopeptidase, S33 CF65_01432 IPR029058 Alpha/Beta hydrolase fold CF65_01434 IPR007016 O-antigen ligase-related CF65_01436 IPR000771 Fructose-bisphosphate aldolase, class-II CF65_01436 IPR013785 Aldolase-type TIM barrel CF65_01436 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype CF65_01437 IPR036043 Phosphoglycerate kinase superfamily CF65_01437 IPR015824 Phosphoglycerate kinase, N-terminal CF65_01437 IPR015911 Phosphoglycerate kinase, conserved site CF65_01437 IPR001576 Phosphoglycerate kinase CF65_01438 IPR033130 Ribonuclease T2, His active site 2 CF65_01438 IPR018188 Ribonuclease T2, His active site 1 CF65_01438 IPR001568 Ribonuclease T2-like CF65_01438 IPR036430 Ribonuclease T2-like superfamily CF65_01439 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_01439 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_01441 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted CF65_01441 IPR029064 50S ribosomal protein L30e-like CF65_01441 IPR029028 Alpha/beta knot methyltransferases CF65_01441 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_01441 IPR001537 tRNA/rRNA methyltransferase, SpoU type CF65_01441 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CF65_01441 IPR004441 RNA methyltransferase TrmH family CF65_01442 IPR016270 CDP-alcohol phosphatidyltransferase class-II family CF65_01442 IPR001736 Phospholipase D/Transphosphatidylase CF65_01442 IPR025202 Phospholipase D-like domain CF65_01444 IPR036397 Ribonuclease H superfamily CF65_01444 IPR012337 Ribonuclease H-like superfamily CF65_01444 IPR038965 Transposase InsF-like CF65_01444 IPR001584 Integrase, catalytic core CF65_01444 IPR025948 HTH-like domain CF65_01449 IPR025166 Integrase, DNA-binding domain CF65_01449 IPR011010 DNA breaking-rejoining enzyme, catalytic core CF65_01449 IPR013762 Integrase-like, catalytic domain superfamily CF65_01449 IPR002104 Integrase, catalytic domain CF65_01449 IPR010998 Integrase/recombinase, N-terminal CF65_01449 IPR038488 Integrase, DNA-binding domain superfamily CF65_01451 IPR006000 Xylulokinase CF65_01451 IPR018484 Carbohydrate kinase, FGGY, N-terminal CF65_01451 IPR018485 Carbohydrate kinase, FGGY, C-terminal CF65_01451 IPR018483 Carbohydrate kinase, FGGY, conserved site CF65_01451 IPR000577 Carbohydrate kinase, FGGY CF65_01453 IPR001998 Xylose isomerase CF65_01453 IPR036237 Xylose isomerase-like superfamily CF65_01453 IPR013452 Xylose isomerase, bacterial-type CF65_01455 IPR028082 Periplasmic binding protein-like I CF65_01455 IPR025997 Periplasmic binding protein CF65_01455 IPR013456 D-xylose ABC transporter, substrate-binding protein CF65_01456 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01456 IPR013455 ABC transporter, D-xylose, ATP-binding protein CF65_01456 IPR017871 ABC transporter, conserved site CF65_01456 IPR003593 AAA+ ATPase domain CF65_01456 IPR003439 ABC transporter-like CF65_01457 IPR001851 ABC transporter, permease CF65_01458 IPR004839 Aminotransferase, class I/classII CF65_01458 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_01458 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_01458 IPR027619 Putative C-S lyase CF65_01458 IPR015424 Pyridoxal phosphate-dependent transferase CF65_01459 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CF65_01459 IPR004770 Na+/H+ antiporter NhaC CF65_01462 IPR018062 HTH domain AraC-type, conserved site CF65_01462 IPR020449 Transcription regulator HTH, AraC- type CF65_01462 IPR028082 Periplasmic binding protein-like I CF65_01462 IPR018060 DNA binding HTH domain, AraC-type CF65_01462 IPR009057 Homeobox-like domain superfamily CF65_01463 IPR011701 Major facilitator superfamily CF65_01463 IPR020846 Major facilitator superfamily domain CF65_01463 IPR036259 MFS transporter superfamily CF65_01463 IPR004638 Drug resistance transporter EmrB-like CF65_01465 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CF65_01465 IPR013789 Phosphotransferase system, mannose family IIA component CF65_01465 IPR004701 Phosphotransferase system, mannose-type IIA component CF65_01465 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily CF65_01465 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CF65_01465 IPR033887 PTS system mannose/sorbose specific IIA subunit CF65_01465 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CF65_01466 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit CF65_01467 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CF65_01471 IPR003356 DNA methylase, adenine-specific CF65_01471 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_01471 IPR004546 Restriction endonuclease, type I, HsdM CF65_01471 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01471 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CF65_01471 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CF65_01473 IPR000055 Restriction endonuclease, type I, HsdS CF65_01477 IPR022625 Type-1 restriction enzyme R protein, C-terminal CF65_01477 IPR040980 SWI2/SNF2 ATPase CF65_01477 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_01477 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01477 IPR004473 Restriction endonuclease, type I, HsdR CF65_01477 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal CF65_01479 IPR006059 Bacterial extracellular solute-binding protein CF65_01479 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CF65_01480 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CF65_01480 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily CF65_01480 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CF65_01480 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CF65_01482 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01482 IPR003593 AAA+ ATPase domain CF65_01482 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CF65_01482 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CF65_01482 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CF65_01482 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CF65_01482 IPR005722 ATP synthase, F1 complex, beta subunit CF65_01482 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CF65_01484 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site CF65_01484 IPR000131 ATP synthase, F1 complex, gamma subunit CF65_01484 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CF65_01486 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CF65_01486 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CF65_01486 IPR000793 ATP synthase, alpha subunit, C-terminal CF65_01486 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CF65_01486 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CF65_01486 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CF65_01486 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CF65_01486 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01486 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CF65_01486 IPR005294 ATP synthase, F1 complex, alpha subunit CF65_01487 IPR000711 ATPase, OSCP/delta subunit CF65_01487 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily CF65_01488 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CF65_01488 IPR005864 ATP synthase, F0 complex, subunit b, bacterial CF65_01488 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CF65_01489 IPR035921 F/V-ATP synthase subunit C superfamily CF65_01489 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast CF65_01489 IPR000454 ATP synthase, F0 complex, subunit C CF65_01489 IPR038662 F1F0 ATP synthase subunit C superfamily CF65_01489 IPR002379 V-ATPase proteolipid subunit C-like domain CF65_01489 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CF65_01490 IPR000568 ATP synthase, F0 complex, subunit A CF65_01490 IPR023011 ATP synthase, F0 complex, subunit A, active site CF65_01490 IPR035908 ATP synthase, F0 complex, subunit A superfamily CF65_01491 IPR005598 ATP synthase protein I CF65_01492 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01492 IPR003682 rRNA small subunit methyltransferase G CF65_01494 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01494 IPR036390 Winged helix DNA-binding domain superfamily CF65_01494 IPR002577 Helix-turn-helix, HxlR type CF65_01495 IPR008030 NmrA-like domain CF65_01495 IPR036291 NAD(P)-binding domain superfamily CF65_01496 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG CF65_01496 IPR026904 GidA associated domain 3 CF65_01496 IPR020595 MnmG-related, conserved site CF65_01496 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01496 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CF65_01497 IPR001094 Flavodoxin-like CF65_01497 IPR008254 Flavodoxin/nitric oxide synthase CF65_01497 IPR029039 Flavoprotein-like superfamily CF65_01498 IPR009252 Cell division protein ZapB CF65_01499 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase CF65_01502 IPR011004 Trimeric LpxA-like superfamily CF65_01502 IPR005881 Serine O-acetyltransferase CF65_01502 IPR010493 Serine acetyltransferase, N-terminal CF65_01502 IPR018357 Hexapeptide transferase, conserved site CF65_01502 IPR001451 Hexapeptide repeat CF65_01502 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CF65_01503 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CF65_01503 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CF65_01503 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CF65_01503 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CF65_01503 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CF65_01503 IPR036291 NAD(P)-binding domain superfamily CF65_01506 IPR003708 Bacterial protein export chaperone SecB CF65_01506 IPR035958 SecB-like superfamily CF65_01507 IPR001763 Rhodanese-like domain CF65_01507 IPR036873 Rhodanese-like domain superfamily CF65_01508 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CF65_01509 IPR017871 ABC transporter, conserved site CF65_01509 IPR011527 ABC transporter type 1, transmembrane domain CF65_01509 IPR003593 AAA+ ATPase domain CF65_01509 IPR036640 ABC transporter type 1, transmembrane domain superfamily CF65_01509 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01509 IPR003439 ABC transporter-like CF65_01510 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CF65_01510 IPR003439 ABC transporter-like CF65_01510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01510 IPR011527 ABC transporter type 1, transmembrane domain CF65_01510 IPR036640 ABC transporter type 1, transmembrane domain superfamily CF65_01510 IPR003593 AAA+ ATPase domain CF65_01511 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CF65_01511 IPR009057 Homeobox-like domain superfamily CF65_01511 IPR001647 DNA-binding HTH domain, TetR-type CF65_01513 IPR036390 Winged helix DNA-binding domain superfamily CF65_01513 IPR000847 Transcription regulator HTH, LysR CF65_01513 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01513 IPR005119 LysR, substrate-binding CF65_01514 IPR011767 Glutaredoxin active site CF65_01514 IPR036249 Thioredoxin-like superfamily CF65_01514 IPR013740 Redoxin CF65_01514 IPR037944 Peroxiredoxin-5-like CF65_01514 IPR014025 Glutaredoxin subgroup CF65_01514 IPR011906 Glutaredoxin domain CF65_01514 IPR002109 Glutaredoxin CF65_01515 IPR007236 SlyX CF65_01517 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CF65_01517 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CF65_01517 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily CF65_01519 IPR039445 Transcriptional regulator DauR-like, HTH domain CF65_01519 IPR013559 YheO-like CF65_01519 IPR039446 Transcriptional regulator DauR-like CF65_01522 IPR027396 DsrEFH-like CF65_01522 IPR003787 Sulphur relay, DsrE/F-like protein CF65_01522 IPR017462 Sulphur relay, TusC/DsrF CF65_01523 IPR007215 Sulphur relay, TusB/DsrH CF65_01523 IPR027396 DsrEFH-like CF65_01524 IPR017871 ABC transporter, conserved site CF65_01524 IPR003593 AAA+ ATPase domain CF65_01524 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CF65_01524 IPR003439 ABC transporter-like CF65_01524 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01525 IPR035906 MetI-like superfamily CF65_01525 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_01525 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CF65_01526 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CF65_01526 IPR018313 Solute-binding protein family 3, conserved site CF65_01528 IPR006076 FAD dependent oxidoreductase CF65_01528 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01533 IPR025272 Domain of unknown function DUF4065 CF65_01534 IPR007685 RelA/SpoT CF65_01537 IPR001347 Sugar isomerase (SIS) CF65_01537 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein CF65_01537 IPR005486 Glucokinase regulatory protein, conserved site CF65_01537 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ CF65_01538 IPR005338 Anhydro-N-acetylmuramic acid kinase CF65_01539 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01539 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CF65_01539 IPR038009 GlmU, C-terminal LbH domain CF65_01539 IPR001451 Hexapeptide repeat CF65_01539 IPR025877 MobA-like NTP transferase CF65_01539 IPR018357 Hexapeptide transferase, conserved site CF65_01539 IPR011004 Trimeric LpxA-like superfamily CF65_01546 IPR001034 DeoR-type HTH domain CF65_01546 IPR014036 DeoR C-terminal sensor domain CF65_01546 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CF65_01546 IPR037171 NagB/RpiA transferase-like CF65_01547 IPR002915 DeoC/FbaB/ lacD aldolase CF65_01547 IPR028581 Deoxyribose-phosphate aldolase type I CF65_01547 IPR011343 Deoxyribose-phosphate aldolase CF65_01547 IPR013785 Aldolase-type TIM barrel CF65_01549 IPR009057 Homeobox-like domain superfamily CF65_01552 IPR025985 YnbE-like lipoprotein CF65_01554 IPR002771 Multiple antibiotic resistance (MarC)-related CF65_01557 IPR013765 DNA recombination and repair protein RecA CF65_01557 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CF65_01557 IPR020584 DNA recombination/repair protein RecA, conserved site CF65_01557 IPR003593 AAA+ ATPase domain CF65_01557 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01557 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CF65_01557 IPR023400 DNA recombination and repair protein RecA, C-terminal CF65_01559 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01559 IPR003783 Regulatory protein RecX CF65_01561 IPR019897 RidA, conserved site CF65_01561 IPR035959 RutC-like superfamily CF65_01561 IPR006175 YjgF/YER057c/UK114 family CF65_01561 IPR006056 RidA family CF65_01563 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CF65_01563 IPR005478 Transketolase, bacterial-like CF65_01563 IPR029061 Thiamin diphosphate-binding fold CF65_01563 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_01563 IPR020826 Transketolase binding site CF65_01563 IPR005474 Transketolase, N-terminal CF65_01563 IPR033247 Transketolase family CF65_01563 IPR033248 Transketolase, C-terminal domain CF65_01564 IPR013785 Aldolase-type TIM barrel CF65_01564 IPR018225 Transaldolase, active site CF65_01564 IPR004730 Transaldolase type 1 CF65_01564 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CF65_01568 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01568 IPR003439 ABC transporter-like CF65_01568 IPR003593 AAA+ ATPase domain CF65_01569 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01569 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CF65_01569 IPR003593 AAA+ ATPase domain CF65_01569 IPR003439 ABC transporter-like CF65_01571 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CF65_01571 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_01571 IPR035906 MetI-like superfamily CF65_01572 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_01572 IPR035906 MetI-like superfamily CF65_01573 IPR023765 Solute-binding protein family 5, conserved site CF65_01573 IPR039424 Solute-binding protein family 5 CF65_01573 IPR000914 Solute-binding protein family 5 domain CF65_01573 IPR030678 Peptide/nickel binding protein, MppA-type CF65_01575 IPR007413 Protein of unknown function DUF463, YcjX-like protein CF65_01577 IPR021147 Protein of unknown function DUF697 CF65_01577 IPR006507 Uncharacterised protein family UPF0283 CF65_01579 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01579 IPR030828 TyrR family, helix-turn-helix domain CF65_01579 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CF65_01579 IPR009057 Homeobox-like domain superfamily CF65_01579 IPR003593 AAA+ ATPase domain CF65_01579 IPR002078 RNA polymerase sigma factor 54 interaction domain CF65_01584 IPR005001 RNA-binding protein Hfq CF65_01584 IPR010920 LSM domain superfamily CF65_01585 IPR039657 Dimethylallyltransferase CF65_01585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01585 IPR018022 IPP transferase CF65_01586 IPR002099 DNA mismatch repair protein family, N-terminal CF65_01586 IPR013507 DNA mismatch repair protein, S5 domain 2-like CF65_01586 IPR020667 DNA mismatch repair protein, MutL CF65_01586 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms CF65_01586 IPR042120 MutL, C-terminal domain, dimerisation subdomain CF65_01586 IPR042121 MutL, C-terminal domain, regulatory subdomain CF65_01586 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_01586 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_01586 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_01586 IPR014790 MutL, C-terminal, dimerisation CF65_01586 IPR037198 MutL, C-terminal domain superfamily CF65_01586 IPR014762 DNA mismatch repair, conserved site CF65_01588 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CF65_01588 IPR018392 LysM domain CF65_01588 IPR036779 LysM domain superfamily CF65_01589 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01589 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CF65_01593 IPR001173 Glycosyltransferase 2-like CF65_01593 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01594 IPR037163 Spermidine synthase, tetramerisation domain superfamily CF65_01594 IPR035246 Spermidine synthase, tetramerisation domain CF65_01594 IPR001045 Spermidine/spermine synthases CF65_01594 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01594 IPR030373 Polyamine biosynthesis domain, conserved site CF65_01594 IPR030374 Polyamine biosynthesis domain CF65_01596 IPR017850 Alkaline-phosphatase-like, core domain superfamily CF65_01596 IPR040423 Phosphoethanolamine transferase CF65_01596 IPR000917 Sulfatase, N-terminal CF65_01597 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_01597 IPR022894 Oligoribonuclease CF65_01597 IPR036397 Ribonuclease H superfamily CF65_01597 IPR012337 Ribonuclease H-like superfamily CF65_01598 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01598 IPR004881 Ribosome biogenesis GTPase RsgA CF65_01598 IPR010914 RsgA GTPase domain CF65_01598 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CF65_01599 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CF65_01599 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CF65_01599 IPR035895 HPr-like superfamily CF65_01599 IPR000032 Phosphocarrier protein HPr-like CF65_01600 IPR008731 Phosphotransferase system, enzyme I N-terminal CF65_01600 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CF65_01600 IPR036618 PtsI, HPr-binding domain superfamily CF65_01600 IPR024692 Phosphotransferase system, enzyme I CF65_01600 IPR000121 PEP-utilising enzyme, C-terminal CF65_01600 IPR040442 Pyruvate kinase-like domain superfamily CF65_01600 IPR006318 Phosphotransferase system, enzyme I-like CF65_01600 IPR036637 Phosphohistidine domain superfamily CF65_01600 IPR018274 PEP-utilising enzyme, active site CF65_01600 IPR008279 PEP-utilising enzyme, mobile domain CF65_01600 IPR023151 PEP-utilising enzyme, conserved site CF65_01601 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CF65_01601 IPR011055 Duplicated hybrid motif CF65_01603 IPR001567 Peptidase M3A/M3B catalytic domain CF65_01603 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CF65_01604 IPR007401 Protein of unknown function DUF454 CF65_01607 IPR030678 Peptide/nickel binding protein, MppA-type CF65_01607 IPR039424 Solute-binding protein family 5 CF65_01607 IPR023765 Solute-binding protein family 5, conserved site CF65_01607 IPR000914 Solute-binding protein family 5 domain CF65_01608 IPR001544 Aminotransferase class IV CF65_01608 IPR036038 Aminotransferase-like, PLP-dependent enzymes CF65_01609 IPR015890 Chorismate-utilising enzyme, C-terminal CF65_01609 IPR005801 ADC synthase CF65_01609 IPR019999 Anthranilate synthase component I-like CF65_01611 IPR029062 Class I glutamine amidotransferase-like CF65_01611 IPR017926 Glutamine amidotransferase CF65_01611 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CF65_01614 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF65_01614 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CF65_01614 IPR036291 NAD(P)-binding domain superfamily CF65_01614 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CF65_01615 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E CF65_01615 IPR025857 MacB-like periplasmic core domain CF65_01615 IPR003838 ABC transporter permease protein domain CF65_01616 IPR003593 AAA+ ATPase domain CF65_01616 IPR003439 ABC transporter-like CF65_01616 IPR017871 ABC transporter, conserved site CF65_01616 IPR015854 ABC transporter, lipoprotein release, LolD CF65_01616 IPR011924 Lipoprotein releasing system, ATP-binding protein CF65_01616 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01618 IPR003838 ABC transporter permease protein domain CF65_01618 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E CF65_01618 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type CF65_01618 IPR025857 MacB-like periplasmic core domain CF65_01619 IPR006218 DAHP synthetase I/KDSA CF65_01619 IPR006219 DHAP synthase, class 1 CF65_01619 IPR013785 Aldolase-type TIM barrel CF65_01621 IPR007693 DNA helicase, DnaB-like, N-terminal CF65_01621 IPR007694 DNA helicase, DnaB-like, C-terminal CF65_01621 IPR007692 DNA helicase, DnaB type CF65_01621 IPR003593 AAA+ ATPase domain CF65_01621 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01621 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CF65_01621 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CF65_01623 IPR011079 Alanine racemase, C-terminal CF65_01623 IPR001608 Alanine racemase, N-terminal CF65_01623 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CF65_01623 IPR000821 Alanine racemase CF65_01623 IPR029066 PLP-binding barrel CF65_01623 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CF65_01624 IPR001672 Phosphoglucose isomerase (PGI) CF65_01624 IPR023096 Phosphoglucose isomerase, C-terminal CF65_01624 IPR018189 Phosphoglucose isomerase, conserved site CF65_01624 IPR035482 Phosphoglucose isomerase, SIS domain 2 CF65_01624 IPR035476 Phosphoglucose isomerase, SIS domain 1 CF65_01625 IPR036467 Lumazine/riboflavin synthase superfamily CF65_01625 IPR002180 Lumazine/riboflavin synthase CF65_01625 IPR034964 Lumazine synthase CF65_01626 IPR006027 NusB/RsmB/TIM44 CF65_01626 IPR011605 NusB antitermination factor CF65_01626 IPR035926 NusB-like superfamily CF65_01628 IPR010918 PurM-like, C-terminal domain CF65_01628 IPR006283 Thiamine-monophosphate kinase CF65_01628 IPR036921 PurM-like, N-terminal domain superfamily CF65_01628 IPR016188 PurM-like, N-terminal domain CF65_01628 IPR036676 PurM-like, C-terminal domain superfamily CF65_01629 IPR007686 YutG/PgpA domain CF65_01629 IPR036681 PgpA-like superfamily CF65_01629 IPR026037 Phosphatidylglycerophosphatase A CF65_01630 IPR004778 Homoserine/Threonine efflux protein CF65_01630 IPR001123 Amino acid exporter protein, LeuE-type CF65_01631 IPR036291 NAD(P)-binding domain superfamily CF65_01631 IPR023940 Dihydrodipicolinate reductase CF65_01631 IPR000846 Dihydrodipicolinate reductase, N-terminal CF65_01631 IPR022663 Dihydrodipicolinate reductase, C-terminal CF65_01631 IPR022664 Dihydrodipicolinate reductase, conserved site CF65_01633 IPR012675 Beta-grasp domain superfamily CF65_01633 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CF65_01633 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CF65_01633 IPR036010 2Fe-2S ferredoxin-like superfamily CF65_01635 IPR009078 Ferritin-like superfamily CF65_01635 IPR012348 Ribonucleotide reductase-like CF65_01635 IPR033909 Ribonucleotide reductase small subunit CF65_01635 IPR000358 Ribonucleotide reductase small subunit family CF65_01635 IPR030475 Ribonucleotide reductase small subunit, acitve site CF65_01637 IPR005144 ATP-cone domain CF65_01637 IPR013346 Ribonucleotide reductase, class I , alpha subunit CF65_01637 IPR000788 Ribonucleotide reductase large subunit, C-terminal CF65_01637 IPR013509 Ribonucleotide reductase large subunit, N-terminal CF65_01637 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CF65_01637 IPR039718 Ribonucleoside-diphosphate reductase large subunit CF65_01640 IPR022625 Type-1 restriction enzyme R protein, C-terminal CF65_01640 IPR004473 Restriction endonuclease, type I, HsdR CF65_01640 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal CF65_01640 IPR040980 SWI2/SNF2 ATPase CF65_01640 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_01640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01642 IPR026045 Ferric binding protein CF65_01644 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_01644 IPR035906 MetI-like superfamily CF65_01645 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01645 IPR003593 AAA+ ATPase domain CF65_01645 IPR003439 ABC transporter-like CF65_01645 IPR017871 ABC transporter, conserved site CF65_01645 IPR015853 ABC transporter, ferric cation import, FbpC CF65_01645 IPR013611 Transport-associated OB, type 2 CF65_01645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01648 IPR014635 Alpha-amylase, MalS type CF65_01648 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CF65_01648 IPR017853 Glycoside hydrolase superfamily CF65_01649 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_01649 IPR035906 MetI-like superfamily CF65_01650 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like CF65_01650 IPR035906 MetI-like superfamily CF65_01650 IPR035277 MalF, N-terminal CF65_01650 IPR029345 Maltose transport system permease protein MalF, P2 domain CF65_01650 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_01654 IPR006061 Solute-binding family 1, conserved site CF65_01654 IPR006059 Bacterial extracellular solute-binding protein CF65_01654 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein CF65_01656 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01656 IPR040582 MalK, OB fold domain CF65_01656 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01656 IPR015855 ABC transporter, maltose/maltodextrin import, MalK CF65_01656 IPR017871 ABC transporter, conserved site CF65_01656 IPR003439 ABC transporter-like CF65_01656 IPR003593 AAA+ ATPase domain CF65_01657 IPR036998 Porin, LamB-type superfamily CF65_01657 IPR003192 Porin, LamB-type CF65_01657 IPR023738 Maltoporin CF65_01658 IPR010794 Maltose operon periplasmic CF65_01661 IPR000594 THIF-type NAD/FAD binding fold CF65_01661 IPR012730 Molybdopterin synthase sulfurylase MoeB CF65_01661 IPR035985 Ubiquitin-activating enzyme CF65_01662 IPR005111 MoeA, C-terminal, domain IV CF65_01662 IPR038987 Molybdopterin biosynthesis protein MoeA-like CF65_01662 IPR036688 MoeA, C-terminal, domain IV superfamily CF65_01662 IPR036135 MoeA, N-terminal and linker domain superfamily CF65_01662 IPR036425 MoaB/Mog-like domain superfamily CF65_01662 IPR005110 MoeA, N-terminal and linker domain CF65_01662 IPR001453 MoaB/Mog domain CF65_01662 IPR008284 Molybdenum cofactor biosynthesis, conserved site CF65_01663 IPR020602 GTP cyclohydrolase I domain CF65_01663 IPR018234 GTP cyclohydrolase I, conserved site CF65_01663 IPR001474 GTP cyclohydrolase I CF65_01666 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C CF65_01666 IPR012338 Beta-lactamase/transpeptidase-like CF65_01668 IPR028624 Transcription elongation factor GreA/GreB CF65_01668 IPR006359 Transcription elongation factor GreA CF65_01668 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CF65_01668 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CF65_01668 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CF65_01668 IPR023459 Transcription elongation factor GreA/GreB family CF65_01668 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CF65_01668 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CF65_01670 IPR001890 RNA-binding, CRM domain CF65_01670 IPR017924 RNA-binding protein YhbY CF65_01670 IPR035920 YhbY-like superfamily CF65_01671 IPR009241 Toxin HigB-like CF65_01671 IPR014056 Addiction module killer protein, predicted CF65_01672 IPR001387 Cro/C1-type helix-turn-helix domain CF65_01672 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CF65_01672 IPR014057 Uncharacterized protein HI1420 CF65_01673 IPR017938 Riboflavin synthase-like beta-barrel CF65_01673 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CF65_01673 IPR001783 Lumazine-binding protein CF65_01673 IPR026017 Lumazine-binding domain CF65_01675 IPR002528 Multi antimicrobial extrusion protein CF65_01678 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CF65_01678 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CF65_01678 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CF65_01679 IPR036291 NAD(P)-binding domain superfamily CF65_01681 IPR005950 Molybdate ABC transporter, substrate-binding protein CF65_01682 IPR035906 MetI-like superfamily CF65_01682 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_01684 IPR017871 ABC transporter, conserved site CF65_01684 IPR003593 AAA+ ATPase domain CF65_01684 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01684 IPR003439 ABC transporter-like CF65_01685 IPR013785 Aldolase-type TIM barrel CF65_01685 IPR006242 Putative pyrophosphorylase ModD CF65_01685 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CF65_01685 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CF65_01685 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CF65_01685 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CF65_01685 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily CF65_01687 IPR036059 Metalloprotease TldD/PmbA superfamily CF65_01687 IPR035068 Metalloprotease TldD/PmbA, N-terminal CF65_01687 IPR025502 TldD CF65_01687 IPR002510 Metalloprotease TldD/PmbA CF65_01688 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain CF65_01688 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain CF65_01688 IPR011625 Alpha-2-macroglobulin, bait region domain CF65_01688 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain CF65_01688 IPR002890 Macroglobulin domain CF65_01688 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CF65_01688 IPR021868 Alpha-2-macroglobulin MG3 domain CF65_01688 IPR001599 Alpha-2-macroglobulin CF65_01689 IPR004630 Uncharacterised protein family UPF0324, bacteria CF65_01689 IPR018383 Uncharacterised protein family UPF0324, prokaryote CF65_01690 IPR012338 Beta-lactamase/transpeptidase-like CF65_01690 IPR001264 Glycosyl transferase, family 51 CF65_01690 IPR023346 Lysozyme-like domain superfamily CF65_01690 IPR011815 Penicillin-binding protein 1C CF65_01690 IPR009647 Penicillin-binding, C-terminal CF65_01690 IPR036950 Penicillin binding protein transglycosylase domain CF65_01690 IPR001460 Penicillin-binding protein, transpeptidase CF65_01692 IPR013785 Aldolase-type TIM barrel CF65_01692 IPR011060 Ribulose-phosphate binding barrel CF65_01692 IPR001754 Orotidine 5'-phosphate decarboxylase domain CF65_01692 IPR041710 HPS/KGPDC domain CF65_01694 IPR016152 Phosphotransferase/anion transporter CF65_01694 IPR002178 PTS EIIA type-2 domain CF65_01695 IPR004703 Phosphotransferase system, sugar-specific permease component CF65_01696 IPR023951 L-ascorbate-6-phosphate lactonase UlaG CF65_01696 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CF65_01698 IPR001034 DeoR-type HTH domain CF65_01698 IPR014036 DeoR C-terminal sensor domain CF65_01698 IPR036390 Winged helix DNA-binding domain superfamily CF65_01698 IPR023711 Transcription regulator HTH, UlaR CF65_01698 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CF65_01698 IPR037171 NagB/RpiA transferase-like CF65_01700 IPR036237 Xylose isomerase-like superfamily CF65_01700 IPR004560 L-ribulose-5-phosphate 3-epimerase CF65_01700 IPR013022 Xylose isomerase-like, TIM barrel domain CF65_01700 IPR001719 AP endonuclease 2 CF65_01703 IPR004661 L-ribulose-5-phosphate 4-epimerase CF65_01703 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CF65_01703 IPR001303 Class II aldolase/adducin N-terminal CF65_01704 IPR013059 Tryptophan/tyrosine transporter CF65_01704 IPR013061 Tryptophan/tryrosine permease, conserved site CF65_01704 IPR018227 Amino acid/polyamine transporter 2 CF65_01705 IPR006101 Glycoside hydrolase, family 2 CF65_01705 IPR032312 Beta-galactosidase, domain 4 CF65_01705 IPR017853 Glycoside hydrolase superfamily CF65_01705 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CF65_01705 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CF65_01705 IPR023230 Glycoside hydrolase, family 2, conserved site CF65_01705 IPR013783 Immunoglobulin-like fold CF65_01705 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase CF65_01705 IPR006103 Glycoside hydrolase family 2, catalytic domain CF65_01705 IPR008979 Galactose-binding-like domain superfamily CF65_01705 IPR011013 Galactose mutarotase-like domain superfamily CF65_01705 IPR014718 Glycoside hydrolase-type carbohydrate-binding CF65_01705 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CF65_01705 IPR004199 Beta galactosidase small chain/ domain 5 CF65_01705 IPR023232 Glycoside hydrolase, family 2, active site CF65_01708 IPR011767 Glutaredoxin active site CF65_01708 IPR002109 Glutaredoxin CF65_01708 IPR014025 Glutaredoxin subgroup CF65_01708 IPR036249 Thioredoxin-like superfamily CF65_01708 IPR011902 Glutaredoxin, GrxA CF65_01709 IPR016446 Flavin oxidoreductase Frp family CF65_01709 IPR029479 Nitroreductase CF65_01709 IPR000415 Nitroreductase-like CF65_01710 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX CF65_01710 IPR041107 RimK, PreATP-grasp domain CF65_01710 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK CF65_01710 IPR013651 ATP-grasp fold, RimK-type CF65_01710 IPR011761 ATP-grasp fold CF65_01710 IPR013815 ATP-grasp fold, subdomain 1 CF65_01711 IPR022987 Uncharacterised protein family UPF0227 CF65_01711 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CF65_01711 IPR029058 Alpha/Beta hydrolase fold CF65_01715 IPR016087 Chalcone isomerase CF65_01717 IPR008948 L-Aspartase-like CF65_01717 IPR000362 Fumarate lyase family CF65_01717 IPR020557 Fumarate lyase, conserved site CF65_01717 IPR018951 Fumarase C, C-terminal CF65_01717 IPR024083 Fumarase/histidase, N-terminal CF65_01717 IPR022761 Fumarate lyase, N-terminal CF65_01717 IPR005677 Fumarate hydratase, class II CF65_01718 IPR036768 DNA polymerase III subunit chi superfamily CF65_01718 IPR007459 DNA polymerase III chi subunit, HolC CF65_01724 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CF65_01724 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_01724 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CF65_01724 IPR002300 Aminoacyl-tRNA synthetase, class Ia CF65_01724 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CF65_01724 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01724 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CF65_01724 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CF65_01724 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CF65_01724 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CF65_01724 IPR002303 Valine-tRNA ligase CF65_01728 IPR017508 HipA, N-terminal subdomain 1 CF65_01728 IPR012893 HipA-like, C-terminal CF65_01731 IPR011701 Major facilitator superfamily CF65_01731 IPR004638 Drug resistance transporter EmrB-like CF65_01731 IPR036259 MFS transporter superfamily CF65_01731 IPR020846 Major facilitator superfamily domain CF65_01732 IPR005694 Efflux pump membrane protein CF65_01732 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CF65_01734 IPR023188 DNA-binding protein Dps, conserved site CF65_01734 IPR002177 DNA-binding protein Dps CF65_01734 IPR012347 Ferritin-like CF65_01734 IPR008331 Ferritin/DPS protein domain CF65_01734 IPR009078 Ferritin-like superfamily CF65_01737 IPR001900 Ribonuclease II/R CF65_01737 IPR012340 Nucleic acid-binding, OB-fold CF65_01737 IPR011804 Ribonuclease II CF65_01737 IPR013223 Ribonuclease B, N-terminal OB domain CF65_01737 IPR022967 RNA-binding domain, S1 CF65_01737 IPR022966 Ribonuclease II/R, conserved site CF65_01737 IPR004476 Ribonuclease II/ribonuclease R CF65_01737 IPR003029 S1 domain CF65_01737 IPR011129 Cold shock domain CF65_01738 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CF65_01738 IPR036291 NAD(P)-binding domain superfamily CF65_01738 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01739 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CF65_01739 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CF65_01740 IPR024924 7-carboxy-7-deazaguanine synthase-like CF65_01740 IPR007197 Radical SAM CF65_01740 IPR013785 Aldolase-type TIM barrel CF65_01741 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family CF65_01741 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily CF65_01743 IPR006195 Aminoacyl-tRNA synthetase, class II CF65_01743 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CF65_01743 IPR002313 Lysine-tRNA ligase, class II CF65_01743 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CF65_01743 IPR012340 Nucleic acid-binding, OB-fold CF65_01743 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CF65_01744 IPR000352 Peptide chain release factor class I CF65_01744 IPR005139 Peptide chain release factor CF65_01744 IPR004374 Peptide chain release factor 2 CF65_01745 IPR004374 Peptide chain release factor 2 CF65_01745 IPR000352 Peptide chain release factor class I CF65_01745 IPR005139 Peptide chain release factor CF65_01746 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily CF65_01746 IPR036249 Thioredoxin-like superfamily CF65_01746 IPR012336 Thioredoxin-like fold CF65_01746 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CF65_01746 IPR033954 Disulphide bond isomerase, DsbC/G CF65_01747 IPR001667 DDH domain CF65_01747 IPR038763 DHH phosphoesterase superfamily CF65_01747 IPR003156 DHHA1 domain CF65_01747 IPR004610 Bacterial RecJ exonuclease CF65_01747 IPR041122 RecJ, OB domain CF65_01748 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CF65_01748 IPR036249 Thioredoxin-like superfamily CF65_01750 IPR000845 Nucleoside phosphorylase domain CF65_01750 IPR010049 MTA/SAH nucleosidase CF65_01750 IPR035994 Nucleoside phosphorylase superfamily CF65_01751 IPR019613 Protein of unknown function DUF4198 CF65_01755 IPR002751 Metal transport protein CbiM/NikMN CF65_01757 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01757 IPR003439 ABC transporter-like CF65_01757 IPR003593 AAA+ ATPase domain CF65_01758 IPR004392 Hydrogenase maturation factor HypB CF65_01758 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01758 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CF65_01759 IPR002780 Hydrogenase formation HypD protein CF65_01759 IPR042244 HypD, domain 1 CF65_01759 IPR042243 HypD, domain 2 CF65_01760 IPR011854 Carbamoyl dehydratase HypE CF65_01760 IPR010918 PurM-like, C-terminal domain CF65_01760 IPR036921 PurM-like, N-terminal domain superfamily CF65_01760 IPR016188 PurM-like, N-terminal domain CF65_01760 IPR036676 PurM-like, C-terminal domain superfamily CF65_01763 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CF65_01763 IPR039418 LexA-like CF65_01763 IPR036286 LexA/Signal peptidase-like superfamily CF65_01763 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_01763 IPR001387 Cro/C1-type helix-turn-helix domain CF65_01765 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01765 IPR009004 Transposase, Mu, C-terminal CF65_01765 IPR009057 Homeobox-like domain superfamily CF65_01765 IPR015378 Transposase-like, Mu, C-terminal CF65_01765 IPR012337 Ribonuclease H-like superfamily CF65_01765 IPR004189 Bacteriophage Mu, transposase CF65_01765 IPR015126 Mu DNA binding, I gamma subdomain CF65_01765 IPR036397 Ribonuclease H superfamily CF65_01765 IPR003314 Mu-type HTH domain CF65_01765 IPR009061 Putative DNA-binding domain superfamily CF65_01772 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CF65_01772 IPR036291 NAD(P)-binding domain superfamily CF65_01774 IPR029041 FAD-linked oxidoreductase-like CF65_01774 IPR003171 Methylenetetrahydrofolate reductase CF65_01774 IPR004620 5,10-methylenetetrahydrofolate reductase CF65_01776 IPR005495 Permease LptG/LptF-related CF65_01776 IPR030923 LPS export ABC transporter permease LptG CF65_01777 IPR005495 Permease LptG/LptF-related CF65_01777 IPR030922 LPS export ABC transporter permease LptF CF65_01778 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CF65_01778 IPR023042 Peptidase M17, leucine aminopeptidase CF65_01778 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CF65_01778 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CF65_01779 IPR005116 Transport-associated OB, type 1 CF65_01779 IPR015852 ABC transporter, molybdenum import, ModC CF65_01779 IPR003439 ABC transporter-like CF65_01779 IPR017871 ABC transporter, conserved site CF65_01779 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01779 IPR011868 Molybdate ABC transporter, ATP-binding protein CF65_01779 IPR004606 Molybdenum-pterin binding CF65_01779 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01779 IPR003593 AAA+ ATPase domain CF65_01780 IPR035906 MetI-like superfamily CF65_01780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_01780 IPR011867 Molybdate ABC transporter, permease protein CF65_01781 IPR005950 Molybdate ABC transporter, substrate-binding protein CF65_01782 IPR005116 Transport-associated OB, type 1 CF65_01782 IPR003725 Molybdenum-binding protein ModE, N-terminal CF65_01782 IPR016462 Molybdate-dependent transcriptional regulator ModE CF65_01782 IPR000847 Transcription regulator HTH, LysR CF65_01782 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01782 IPR036390 Winged helix DNA-binding domain superfamily CF65_01782 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01782 IPR004606 Molybdenum-pterin binding CF65_01784 IPR001898 Solute carrier family 13 CF65_01784 IPR031312 Sodium/sulphate symporter, conserved site CF65_01787 IPR003607 HD/PDEase domain CF65_01787 IPR022971 5'-deoxynucleotidase YfbR CF65_01787 IPR039356 Metal-dependent nucleoside 5'-monophosphatase CF65_01789 IPR001940 Peptidase S1C CF65_01789 IPR011783 Peptidase S1C, DegS CF65_01789 IPR001478 PDZ domain CF65_01789 IPR036034 PDZ superfamily CF65_01789 IPR009003 Peptidase S1, PA clan CF65_01790 IPR004794 Riboflavin biosynthesis protein RibD CF65_01790 IPR002125 Cytidine and deoxycytidylate deaminase domain CF65_01790 IPR016192 APOBEC/CMP deaminase, zinc-binding CF65_01790 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CF65_01790 IPR024072 Dihydrofolate reductase-like domain superfamily CF65_01790 IPR011549 Riboflavin-specific deaminase, C-terminal CF65_01790 IPR016193 Cytidine deaminase-like CF65_01792 IPR003796 Ribonucleotide reductase regulator NrdR-like CF65_01792 IPR005144 ATP-cone domain CF65_01793 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01793 IPR040739 RlmM ferredoxin-like domain CF65_01793 IPR011224 Ribosomal RNA large subunit methyltransferase M CF65_01793 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CF65_01794 IPR000847 Transcription regulator HTH, LysR CF65_01794 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01794 IPR036390 Winged helix DNA-binding domain superfamily CF65_01794 IPR005119 LysR, substrate-binding CF65_01796 IPR033939 Branched-chain aminotransferase CF65_01796 IPR005786 Branched-chain amino acid aminotransferase II CF65_01796 IPR018300 Aminotransferase, class IV, conserved site CF65_01796 IPR001544 Aminotransferase class IV CF65_01796 IPR036038 Aminotransferase-like, PLP-dependent enzymes CF65_01801 IPR001252 Malate dehydrogenase, active site CF65_01801 IPR010097 Malate dehydrogenase, type 1 CF65_01801 IPR036291 NAD(P)-binding domain superfamily CF65_01801 IPR023958 Malate dehydrogenase, type 1, bacterial CF65_01801 IPR001557 L-lactate/malate dehydrogenase CF65_01801 IPR022383 Lactate/malate dehydrogenase, C-terminal CF65_01801 IPR001236 Lactate/malate dehydrogenase, N-terminal CF65_01801 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CF65_01803 IPR001669 Arginine repressor CF65_01803 IPR020899 Arginine repressor, C-terminal CF65_01803 IPR020900 Arginine repressor, DNA-binding domain CF65_01803 IPR036251 Arginine repressor, C-terminal domain superfamily CF65_01803 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01803 IPR036390 Winged helix DNA-binding domain superfamily CF65_01804 IPR013549 Domain of unknown function DUF1731 CF65_01804 IPR036291 NAD(P)-binding domain superfamily CF65_01804 IPR001509 NAD-dependent epimerase/dehydratase CF65_01804 IPR010099 Epimerase family protein SDR39U1 CF65_01805 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA CF65_01805 IPR003667 NqrDE/RnfAE CF65_01807 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria CF65_01807 IPR007202 4Fe-4S domain CF65_01807 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_01807 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_01807 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB CF65_01808 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_01808 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_01808 IPR009051 Alpha-helical ferredoxin CF65_01808 IPR026902 RnfC Barrel sandwich hybrid domain CF65_01808 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CF65_01808 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CF65_01808 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC CF65_01810 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD CF65_01810 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D CF65_01811 IPR007329 FMN-binding CF65_01811 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG CF65_01813 IPR010968 Ion-translocating oxidoreductase complex subunit E CF65_01813 IPR003667 NqrDE/RnfAE CF65_01814 IPR011257 DNA glycosylase CF65_01814 IPR004036 Endonuclease III-like, conserved site-2 CF65_01814 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CF65_01814 IPR004035 Endonuclease III, iron-sulphur binding site CF65_01814 IPR003265 HhH-GPD domain CF65_01814 IPR000445 Helix-hairpin-helix motif CF65_01814 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CF65_01814 IPR005759 Endonuclease III CF65_01815 IPR000175 Sodium:neurotransmitter symporter CF65_01815 IPR037272 Sodium:neurotransmitter symporter superfamily CF65_01818 IPR037294 ABC transporter, BtuC-like CF65_01818 IPR001626 ABC transporter, TroCD-like CF65_01820 IPR003593 AAA+ ATPase domain CF65_01820 IPR017871 ABC transporter, conserved site CF65_01820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01820 IPR017882 Zinc import ATP-binding protein ZnuC CF65_01820 IPR003439 ABC transporter-like CF65_01822 IPR016047 Peptidase M23 CF65_01822 IPR011055 Duplicated hybrid motif CF65_01822 IPR007340 Opacity-associated protein A CF65_01824 IPR003439 ABC transporter-like CF65_01824 IPR017871 ABC transporter, conserved site CF65_01824 IPR003593 AAA+ ATPase domain CF65_01824 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01825 IPR000522 ABC transporter, permease protein, BtuC-like CF65_01825 IPR037294 ABC transporter, BtuC-like CF65_01826 IPR000522 ABC transporter, permease protein, BtuC-like CF65_01826 IPR037294 ABC transporter, BtuC-like CF65_01827 IPR002491 ABC transporter periplasmic binding domain CF65_01827 IPR033870 FatB domain CF65_01830 IPR006179 5'-Nucleotidase/apyrase CF65_01830 IPR006146 5'-Nucleotidase, conserved site CF65_01830 IPR041827 CpdB, N-terminal metallophosphatase domain CF65_01830 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CF65_01830 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CF65_01830 IPR008334 5'-Nucleotidase, C-terminal CF65_01830 IPR029052 Metallo-dependent phosphatase-like CF65_01830 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CF65_01832 IPR006452 Formate dehydrogenase accessory protein CF65_01832 IPR024064 FdhE-like superfamily CF65_01835 IPR036700 Bacterial OB-fold superfamily CF65_01835 IPR005220 Bacterial OB-fold CF65_01835 IPR016052 Bacteriophage 933W, L0136 CF65_01837 IPR011006 CheY-like superfamily CF65_01837 IPR001867 OmpR/PhoB-type DNA-binding domain CF65_01837 IPR001789 Signal transduction response regulator, receiver domain CF65_01837 IPR039420 Transcriptional regulatory protein WalR-like CF65_01837 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01839 IPR009057 Homeobox-like domain superfamily CF65_01839 IPR014875 Mor transcription activator CF65_01841 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01842 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01842 IPR039420 Transcriptional regulatory protein WalR-like CF65_01842 IPR001789 Signal transduction response regulator, receiver domain CF65_01842 IPR001867 OmpR/PhoB-type DNA-binding domain CF65_01842 IPR011006 CheY-like superfamily CF65_01843 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CF65_01843 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_01843 IPR003594 Histidine kinase/HSP90-like ATPase CF65_01843 IPR003660 HAMP domain CF65_01843 IPR013727 Two-component sensor kinase, N-terminal CF65_01843 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CF65_01843 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CF65_01843 IPR005467 Histidine kinase domain CF65_01845 IPR029055 Nucleophile aminohydrolases, N-terminal CF65_01845 IPR000101 Gamma-glutamyltranspeptidase CF65_01846 IPR019629 Uncharacterised protein family HI1736/YgjV CF65_01848 IPR018223 Argininosuccinate synthase, conserved site CF65_01848 IPR001518 Argininosuccinate synthase CF65_01848 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail CF65_01848 IPR023437 Argininosuccinate synthase, type 2 subfamily CF65_01848 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01848 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CF65_01850 IPR036291 NAD(P)-binding domain superfamily CF65_01850 IPR001509 NAD-dependent epimerase/dehydratase CF65_01852 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CF65_01852 IPR032090 Peptide chain release factor 3, C-terminal CF65_01852 IPR035647 EF-G domain III/V-like CF65_01852 IPR041732 Peptide chain release factor 3, GTP-binding domain CF65_01852 IPR005225 Small GTP-binding protein domain CF65_01852 IPR000795 Transcription factor, GTP-binding domain CF65_01852 IPR004161 Translation elongation factor EFTu-like, domain 2 CF65_01852 IPR009000 Translation protein, beta-barrel domain superfamily CF65_01852 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01852 IPR004548 Peptide chain release factor 3 CF65_01852 IPR031157 Tr-type G domain, conserved site CF65_01854 IPR009241 Toxin HigB-like CF65_01857 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme CF65_01857 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CF65_01857 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CF65_01861 IPR029056 Ribokinase-like CF65_01861 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CF65_01861 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CF65_01865 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria CF65_01865 IPR006061 Solute-binding family 1, conserved site CF65_01865 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter CF65_01866 IPR035906 MetI-like superfamily CF65_01866 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_01866 IPR005947 Thiamine ABC transporter, permease protein CF65_01867 IPR017871 ABC transporter, conserved site CF65_01867 IPR003593 AAA+ ATPase domain CF65_01867 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01867 IPR003439 ABC transporter-like CF65_01867 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ CF65_01868 IPR013785 Aldolase-type TIM barrel CF65_01868 IPR010722 Biotin and thiamin synthesis-associated domain CF65_01868 IPR006638 Elp3/MiaB/NifB CF65_01868 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CF65_01868 IPR007197 Radical SAM CF65_01868 IPR024177 Biotin synthase CF65_01869 IPR036034 PDZ superfamily CF65_01869 IPR011782 Peptidase S1C, Do CF65_01869 IPR009003 Peptidase S1, PA clan CF65_01869 IPR001940 Peptidase S1C CF65_01869 IPR001478 PDZ domain CF65_01871 IPR009386 Protein of unknown function DUF1043 CF65_01872 IPR041080 YcaO cyclodehydratase, C-terminal CF65_01872 IPR003776 YcaO-like domain CF65_01873 IPR001250 Mannose-6-phosphate isomerase, type I CF65_01873 IPR016305 Mannose-6-phosphate isomerase CF65_01873 IPR011051 RmlC-like cupin domain superfamily CF65_01873 IPR018050 Phosphomannose isomerase, type I, conserved site CF65_01873 IPR014710 RmlC-like jelly roll fold CF65_01874 IPR036913 YegP-like superfamily CF65_01874 IPR010879 Domain of unknown function DUF1508 CF65_01875 IPR011301 PTS system, maltose/glucose-specific IIBC component CF65_01875 IPR003352 Phosphotransferase system, EIIC CF65_01875 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CF65_01875 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CF65_01875 IPR036878 Glucose permease domain IIB CF65_01875 IPR013013 Phosphotransferase system, EIIC component, type 1 CF65_01875 IPR001996 Phosphotransferase system, IIB component, type 1 CF65_01876 IPR001996 Phosphotransferase system, IIB component, type 1 CF65_01876 IPR011299 PTS system glucose-specific IIBC component CF65_01876 IPR003352 Phosphotransferase system, EIIC CF65_01876 IPR011055 Duplicated hybrid motif CF65_01876 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CF65_01876 IPR036878 Glucose permease domain IIB CF65_01876 IPR013013 Phosphotransferase system, EIIC component, type 1 CF65_01876 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CF65_01878 IPR001279 Metallo-beta-lactamase CF65_01878 IPR017782 Hydroxyacylglutathione hydrolase CF65_01878 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CF65_01878 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CF65_01878 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CF65_01879 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily CF65_01879 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily CF65_01879 IPR036291 NAD(P)-binding domain superfamily CF65_01879 IPR018214 Glutamyl-tRNA reductase, conserved site CF65_01879 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CF65_01879 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CF65_01879 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CF65_01879 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CF65_01880 IPR000600 ROK family CF65_01880 IPR036390 Winged helix DNA-binding domain superfamily CF65_01880 IPR000835 MarR-type HTH domain CF65_01880 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01881 IPR007862 Adenylate kinase, active site lid domain CF65_01881 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01881 IPR000850 Adenylate kinase/UMP-CMP kinase CF65_01881 IPR006259 Adenylate kinase subfamily CF65_01881 IPR033690 Adenylate kinase, conserved site CF65_01883 IPR011701 Major facilitator superfamily CF65_01883 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 CF65_01883 IPR036259 MFS transporter superfamily CF65_01885 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CF65_01885 IPR000688 Hydrogenase maturation factor HypA/HybF CF65_01886 IPR001509 NAD-dependent epimerase/dehydratase CF65_01886 IPR036291 NAD(P)-binding domain superfamily CF65_01886 IPR005886 UDP-glucose 4-epimerase CF65_01887 IPR008523 Protein of unknown function DUF805 CF65_01889 IPR006043 Xanthine/uracil/vitamin C permease CF65_01890 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain CF65_01890 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CF65_01890 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CF65_01890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01890 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CF65_01890 IPR012094 tRNA(Ile)-lysidine synthase CF65_01891 IPR004625 Pyridoxine kinase CF65_01891 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CF65_01891 IPR029056 Ribokinase-like CF65_01891 IPR023685 Pyridoxal kinase PdxY CF65_01893 IPR001095 Acetyl-CoA carboxylase, alpha subunit CF65_01893 IPR029045 ClpP/crotonase-like domain superfamily CF65_01893 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CF65_01894 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily CF65_01894 IPR023416 Transthyretin/hydroxyisourate hydrolase domain CF65_01894 IPR000895 Transthyretin/hydroxyisourate hydrolase CF65_01894 IPR014306 Hydroxyisourate hydrolase CF65_01894 IPR023418 Transthyretin, thyroxine binding site CF65_01894 IPR023419 Transthyretin, conserved site CF65_01906 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01906 IPR011991 ArsR-like helix-turn-helix domain CF65_01906 IPR039418 LexA-like CF65_01906 IPR006200 Transcription regulator LexA CF65_01906 IPR006199 LexA repressor, DNA-binding domain CF65_01906 IPR006197 Peptidase S24, LexA-like CF65_01906 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_01906 IPR036390 Winged helix DNA-binding domain superfamily CF65_01906 IPR036286 LexA/Signal peptidase-like superfamily CF65_01913 IPR022310 NAD/GMP synthase CF65_01913 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01913 IPR029062 Class I glutamine amidotransferase-like CF65_01913 IPR017926 Glutamine amidotransferase CF65_01913 IPR001674 GMP synthase, C-terminal CF65_01913 IPR004739 GMP synthase, glutamine amidotransferase CF65_01913 IPR022955 GMP synthase CF65_01913 IPR025777 GMP synthetase ATP pyrophosphatase domain CF65_01914 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_01914 IPR004386 Toxin-antitoxin system, YafQ-like toxin CF65_01914 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CF65_01915 IPR013321 Arc-type ribbon-helix-helix CF65_01915 IPR007337 RelB antitoxin/Antitoxin DinJ CF65_01918 IPR004669 C4-dicarboxylate anaerobic carrier CF65_01918 IPR018385 C4-dicarboxylate anaerobic carrier-like CF65_01919 IPR035956 RimP, N-terminal domain superfamily CF65_01919 IPR028989 Ribosome maturation factor RimP, N-terminal CF65_01919 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CF65_01919 IPR028998 Ribosome maturation factor RimP, C-terminal CF65_01919 IPR003728 Ribosome maturation factor RimP CF65_01920 IPR036555 NusA, N-terminal domain superfamily CF65_01920 IPR009019 K homology domain superfamily, prokaryotic type CF65_01920 IPR025249 KH domain, NusA-like CF65_01920 IPR015946 K homology domain-like, alpha/beta CF65_01920 IPR004087 K Homology domain CF65_01920 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CF65_01920 IPR010214 Transcription termination factor NusA, C-terminal duplication CF65_01920 IPR003029 S1 domain CF65_01920 IPR013735 Transcription factor NusA, N-terminal CF65_01920 IPR012340 Nucleic acid-binding, OB-fold CF65_01920 IPR010213 Transcription termination factor NusA CF65_01920 IPR022967 RNA-binding domain, S1 CF65_01920 IPR030842 Transcription termination/antitermination protein NusA, bacterial CF65_01922 IPR013575 Initiation factor 2 associated domain, bacterial CF65_01922 IPR009000 Translation protein, beta-barrel domain superfamily CF65_01922 IPR006847 Translation initiation factor IF-2, N-terminal CF65_01922 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01922 IPR000178 Translation initiation factor aIF-2, bacterial-like CF65_01922 IPR015760 Translation initiation factor IF- 2 CF65_01922 IPR023115 Translation initiation factor IF- 2, domain 3 CF65_01922 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CF65_01922 IPR005225 Small GTP-binding protein domain CF65_01922 IPR000795 Transcription factor, GTP-binding domain CF65_01923 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CF65_01923 IPR002941 DNA methylase N-4/N-6 CF65_01923 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_01923 IPR041405 Type III R-M EcoP15I, C-terminal CF65_01923 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01928 IPR038718 SNF2-like, N-terminal domain superfamily CF65_01928 IPR001650 Helicase, C-terminal CF65_01928 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_01928 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01928 IPR000330 SNF2-related, N-terminal domain CF65_01930 IPR020053 Ribosome-binding factor A, conserved site CF65_01930 IPR023799 Ribosome-binding factor A domain superfamily CF65_01930 IPR000238 Ribosome-binding factor A CF65_01930 IPR015946 K homology domain-like, alpha/beta CF65_01932 IPR014780 tRNA pseudouridine synthase II, TruB CF65_01932 IPR032819 tRNA pseudouridylate synthase B, C-terminal CF65_01932 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal CF65_01932 IPR020103 Pseudouridine synthase, catalytic domain superfamily CF65_01932 IPR002501 Pseudouridine synthase II, N-terminal CF65_01932 IPR015947 PUA-like superfamily CF65_01936 IPR024088 Tyrosine-tRNA ligase, bacterial-type CF65_01936 IPR036986 RNA-binding S4 domain superfamily CF65_01936 IPR002942 RNA-binding S4 domain CF65_01936 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01936 IPR002305 Aminoacyl-tRNA synthetase, class Ic CF65_01936 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 CF65_01936 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_01936 IPR002307 Tyrosine-tRNA ligase CF65_01937 IPR040452 Sugar fermentation stimulation protein, C-terminal CF65_01937 IPR005224 Sugar fermentation stimulation protein CF65_01937 IPR041465 SfsA, N-terminal OB domain CF65_01938 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CF65_01938 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CF65_01938 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CF65_01938 IPR026255 NAD(P) transhydrogenase, alpha subunit CF65_01938 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CF65_01938 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CF65_01938 IPR036291 NAD(P)-binding domain superfamily CF65_01939 IPR012136 NADP transhydrogenase, beta subunit CF65_01939 IPR029035 DHS-like NAD/FAD-binding domain superfamily CF65_01939 IPR034300 NADP transhydrogenase beta-like domain CF65_01944 IPR003812 Fido domain CF65_01944 IPR036597 Fido-like domain superfamily CF65_01944 IPR010093 SinI-like, DNA-binding domain CF65_01944 IPR041657 Helix-turn-helix domain, group 17 CF65_01944 IPR040198 Fido domain-containing protein CF65_01945 IPR004536 Selenophosphate synthetase CF65_01945 IPR010918 PurM-like, C-terminal domain CF65_01945 IPR036676 PurM-like, C-terminal domain superfamily CF65_01945 IPR016188 PurM-like, N-terminal domain CF65_01945 IPR023061 Selenophosphate synthetase, class I CF65_01945 IPR036921 PurM-like, N-terminal domain superfamily CF65_01948 IPR035906 MetI-like superfamily CF65_01948 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_01950 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_01950 IPR035906 MetI-like superfamily CF65_01954 IPR001943 UVR domain CF65_01954 IPR036876 UVR domain superfamily CF65_01954 IPR010994 RuvA domain 2-like CF65_01954 IPR000305 GIY-YIG endonuclease CF65_01954 IPR001162 UvrC family homology region CF65_01954 IPR004791 UvrABC system, subunit C CF65_01954 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CF65_01954 IPR035901 GIY-YIG endonuclease superfamily CF65_01954 IPR038476 UvrC homology region 2 superfamily CF65_01956 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01956 IPR003329 Acylneuraminate cytidylyltransferase CF65_01956 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CF65_01957 IPR005651 Trm112-like CF65_01959 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01959 IPR003758 Tetraacyldisaccharide 4'-kinase CF65_01961 IPR039421 Type I protein exporter CF65_01961 IPR011917 ABC transporter, lipid A export, MsbA CF65_01961 IPR003439 ABC transporter-like CF65_01961 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01961 IPR003593 AAA+ ATPase domain CF65_01961 IPR011527 ABC transporter type 1, transmembrane domain CF65_01961 IPR036640 ABC transporter type 1, transmembrane domain superfamily CF65_01961 IPR017871 ABC transporter, conserved site CF65_01962 IPR035681 ComA-like, MBL domain CF65_01962 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CF65_01962 IPR004477 ComEC/Rec2-related protein CF65_01962 IPR004797 Competence protein ComEC/Rec2 CF65_01962 IPR001279 Metallo-beta-lactamase CF65_01962 IPR025405 Domain of unknown function DUF4131 CF65_01963 IPR012784 RNA polymerase-binding transcription factor DksA CF65_01963 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CF65_01963 IPR000962 Zinc finger, DksA/TraR C4-type CF65_01963 IPR037187 DksA, N-terminal domain superfamily CF65_01965 IPR025866 Polymerase A arginine-rich C-terminal domain CF65_01965 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CF65_01965 IPR010206 Poly(A) polymerase I CF65_01965 IPR002646 Poly A polymerase, head domain CF65_01966 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CF65_01966 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CF65_01972 IPR016475 Phosphate acetyltransferase, bacteria CF65_01972 IPR042112 Phosphate acetyltransferase, domain 2 CF65_01972 IPR042113 Phosphate acetyltransferase, domain 1 CF65_01972 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CF65_01972 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01972 IPR010766 DRTGG CF65_01972 IPR002505 Phosphate acetyl/butaryl transferase CF65_01972 IPR004614 Phosphate acetyltransferase CF65_01973 IPR004372 Acetate/propionate kinase CF65_01973 IPR000890 Aliphatic acid kinase, short-chain CF65_01973 IPR023865 Aliphatic acid kinase, short-chain, conserved site CF65_01974 IPR007334 Uncharacterised protein family UPF0208 CF65_01976 IPR003825 Colicin V production, CvpA CF65_01981 IPR017853 Glycoside hydrolase superfamily CF65_01981 IPR003385 Glycoside hydrolase, family 77 CF65_01982 IPR035090 Phosphorylase pyridoxal-phosphate attachment site CF65_01982 IPR000811 Glycosyl transferase, family 35 CF65_01982 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CF65_01983 IPR041617 MalT-like TPR region CF65_01983 IPR016032 Signal transduction response regulator, C-terminal effector CF65_01983 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01983 IPR023768 Transcriptional regulator HTH-type, MalT CF65_01983 IPR000792 Transcription regulator LuxR, C-terminal CF65_01983 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01983 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_01984 IPR004537 Tellurite resistance methyltransferase, TehB CF65_01984 IPR015985 Tellurite resistance methyltransferase TehB-like domain CF65_01984 IPR014431 Tellurite resistance methyltransferase, TehB type-2 CF65_01984 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01984 IPR014710 RmlC-like jelly roll fold CF65_01984 IPR015392 Domain of unknown function DUF1971 CF65_01985 IPR029061 Thiamin diphosphate-binding fold CF65_01985 IPR005474 Transketolase, N-terminal CF65_01985 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CF65_01985 IPR041621 Pyruvate dehydrogenase E1 component, middle domain CF65_01985 IPR004660 Pyruvate dehydrogenase E1 component CF65_01985 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal CF65_01986 IPR011053 Single hybrid motif CF65_01986 IPR036625 E3-binding domain superfamily CF65_01986 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CF65_01986 IPR004167 Peripheral subunit-binding domain CF65_01986 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex CF65_01986 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CF65_01986 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CF65_01986 IPR000089 Biotin/lipoyl attachment CF65_01988 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01988 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CF65_01988 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF65_01988 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CF65_01988 IPR023753 FAD/NAD(P)-binding domain CF65_01988 IPR006258 Dihydrolipoamide dehydrogenase CF65_01988 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CF65_01991 IPR000415 Nitroreductase-like CF65_01991 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CF65_01991 IPR029479 Nitroreductase CF65_01992 IPR029045 ClpP/crotonase-like domain superfamily CF65_01992 IPR004634 Peptidase S49, protease IV CF65_01992 IPR004635 Peptidase S49, SppA CF65_01992 IPR002142 Peptidase S49 CF65_01994 IPR002701 Chorismate mutase II, prokaryotic-type CF65_01994 IPR011277 Chorismate mutase, T-protein CF65_01994 IPR036291 NAD(P)-binding domain superfamily CF65_01994 IPR003099 Prephenate dehydrogenase CF65_01994 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein CF65_01994 IPR036263 Chorismate mutase type II superfamily CF65_01994 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CF65_01994 IPR036979 Chorismate mutase domain superfamily CF65_01995 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CF65_01995 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein CF65_01995 IPR036263 Chorismate mutase type II superfamily CF65_01995 IPR036979 Chorismate mutase domain superfamily CF65_01995 IPR002701 Chorismate mutase II, prokaryotic-type CF65_01995 IPR011277 Chorismate mutase, T-protein CF65_01995 IPR036291 NAD(P)-binding domain superfamily CF65_01995 IPR003099 Prephenate dehydrogenase CF65_01996 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein CF65_01996 IPR036263 Chorismate mutase type II superfamily CF65_01996 IPR036979 Chorismate mutase domain superfamily CF65_01996 IPR002701 Chorismate mutase II, prokaryotic-type CF65_01996 IPR011277 Chorismate mutase, T-protein CF65_01996 IPR003099 Prephenate dehydrogenase CF65_01996 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CF65_01996 IPR036291 NAD(P)-binding domain superfamily CF65_01997 IPR006070 YrdC-like domain CF65_01997 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CF65_01998 IPR020103 Pseudouridine synthase, catalytic domain superfamily CF65_01998 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CF65_01998 IPR006145 Pseudouridine synthase, RsuA/RluA CF65_01998 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CF65_01998 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CF65_01998 IPR002942 RNA-binding S4 domain CF65_01998 IPR036986 RNA-binding S4 domain superfamily CF65_01999 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01999 IPR036390 Winged helix DNA-binding domain superfamily CF65_01999 IPR005119 LysR, substrate-binding CF65_01999 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain CF65_01999 IPR000847 Transcription regulator HTH, LysR CF65_02000 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family CF65_02000 IPR001451 Hexapeptide repeat CF65_02000 IPR018357 Hexapeptide transferase, conserved site CF65_02000 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 CF65_02000 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily CF65_02000 IPR011004 Trimeric LpxA-like superfamily CF65_02001 IPR036763 Putative dsDNA mimic superfamily CF65_02001 IPR007376 dsDNA mimic, putative CF65_02003 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CF65_02003 IPR028082 Periplasmic binding protein-like I CF65_02003 IPR023588 Transcription regulator HTH, PurR CF65_02003 IPR000843 LacI-type HTH domain CF65_02004 IPR000073 Alpha/beta hydrolase fold-1 CF65_02004 IPR008220 Homoserine/serine acetyltransferase MetX-like CF65_02004 IPR029058 Alpha/Beta hydrolase fold CF65_02005 IPR003848 Domain of unknown function DUF218 CF65_02006 IPR028082 Periplasmic binding protein-like I CF65_02006 IPR001761 Periplasmic binding protein/LacI sugar binding domain CF65_02006 IPR012781 D-fructose-responsive transcription factor CF65_02006 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CF65_02006 IPR000843 LacI-type HTH domain CF65_02008 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02010 IPR036249 Thioredoxin-like superfamily CF65_02010 IPR013740 Redoxin CF65_02011 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CF65_02012 IPR002579 Peptide methionine sulphoxide reductase MrsB CF65_02012 IPR028427 Peptide methionine sulfoxide reductase CF65_02012 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CF65_02012 IPR011057 Mss4-like superfamily CF65_02012 IPR002569 Peptide methionine sulphoxide reductase MsrA CF65_02013 IPR001765 Carbonic anhydrase CF65_02013 IPR036874 Carbonic anhydrase superfamily CF65_02013 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CF65_02014 IPR014004 Transport-associated and nodulation domain, bacteria CF65_02014 IPR007055 BON domain CF65_02015 IPR001347 Sugar isomerase (SIS) CF65_02015 IPR035461 GmhA/DiaA CF65_02017 IPR011856 tRNA endonuclease-like domain superfamily CF65_02017 IPR011335 Restriction endonuclease type II-like CF65_02017 IPR003509 Uncharacterised protein family UPF0102 CF65_02018 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_02018 IPR028082 Periplasmic binding protein-like I CF65_02018 IPR007443 Penicillin-binding protein activator LpoA CF65_02020 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CF65_02020 IPR008189 rRNA small subunit methyltransferase I CF65_02020 IPR014776 Tetrapyrrole methylase, subdomain 2 CF65_02020 IPR035996 Tetrapyrrole methylase superfamily CF65_02020 IPR000878 Tetrapyrrole methylase CF65_02020 IPR014777 Tetrapyrrole methylase, subdomain 1 CF65_02021 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CF65_02021 IPR031656 Alpha-glycerophosphate oxidase, C-terminal CF65_02021 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily CF65_02021 IPR006076 FAD dependent oxidoreductase CF65_02021 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_02023 IPR023753 FAD/NAD(P)-binding domain CF65_02023 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_02024 IPR023048 NADH-azoreductase, FMN-dependent CF65_02024 IPR003680 Flavodoxin-like fold CF65_02024 IPR029039 Flavoprotein-like superfamily CF65_02026 IPR002142 Peptidase S49 CF65_02026 IPR029045 ClpP/crotonase-like domain superfamily CF65_02026 IPR013703 Peptidase S49, N-terminal proteobacteria CF65_02027 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CF65_02027 IPR006664 Outer membrane protein, bacterial CF65_02027 IPR006665 OmpA-like domain CF65_02027 IPR006690 Outer membrane protein, OmpA-like, conserved site CF65_02027 IPR036737 OmpA-like domain superfamily CF65_02027 IPR008722 Outer membrane porin F, N-terminal CF65_02030 IPR033728 Threonine-tRNA ligase catalytic core domain CF65_02030 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CF65_02030 IPR004095 TGS CF65_02030 IPR012676 TGS-like CF65_02030 IPR002320 Threonine-tRNA ligase, class IIa CF65_02030 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CF65_02030 IPR006195 Aminoacyl-tRNA synthetase, class II CF65_02030 IPR004154 Anticodon-binding CF65_02030 IPR036621 Anticodon-binding domain superfamily CF65_02030 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CF65_02030 IPR012675 Beta-grasp domain superfamily CF65_02031 IPR041405 Type III R-M EcoP15I, C-terminal CF65_02031 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_02031 IPR002941 DNA methylase N-4/N-6 CF65_02031 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CF65_02031 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02034 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CF65_02034 IPR001433 Oxidoreductase FAD/NAD(P)-binding CF65_02034 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CF65_02034 IPR017927 FAD-binding domain, ferredoxin reductase-type CF65_02034 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CF65_02034 IPR017938 Riboflavin synthase-like beta-barrel CF65_02034 IPR033892 Ferredoxin--NADP reductase, bacteria CF65_02035 IPR001288 Translation initiation factor 3 CF65_02035 IPR019813 Translation initiation factor 3, conserved site CF65_02035 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CF65_02035 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CF65_02035 IPR019814 Translation initiation factor 3, N-terminal CF65_02035 IPR019815 Translation initiation factor 3, C-terminal CF65_02038 IPR037229 Ribosomal protein L35 superfamily CF65_02038 IPR021137 Ribosomal protein L35 CF65_02038 IPR018265 Ribosomal protein L35, conserved site CF65_02038 IPR001706 Ribosomal protein L35, non-mitochondrial CF65_02039 IPR035566 Ribosomal protein L20, C-terminal CF65_02039 IPR005813 Ribosomal protein L20 CF65_02040 IPR036515 Transposase IS200-like superfamily CF65_02040 IPR002686 Transposase IS200-like CF65_02042 IPR002915 DeoC/FbaB/ lacD aldolase CF65_02042 IPR013785 Aldolase-type TIM barrel CF65_02042 IPR005927 Tagatose 1,6-diphosphate aldolase CF65_02043 IPR013785 Aldolase-type TIM barrel CF65_02043 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like CF65_02043 IPR023436 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ CF65_02044 IPR002178 PTS EIIA type-2 domain CF65_02044 IPR016152 Phosphotransferase/anion transporter CF65_02045 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CF65_02045 IPR013011 Phosphotransferase system, EIIB component, type 2 CF65_02045 IPR036095 PTS system IIB component-like superfamily CF65_02046 IPR013853 Galactitol permease IIC component CF65_02046 IPR013014 Phosphotransferase system, EIIC component, type 2 CF65_02046 IPR004703 Phosphotransferase system, sugar-specific permease component CF65_02047 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CF65_02047 IPR011032 GroES-like superfamily CF65_02047 IPR020843 Polyketide synthase, enoylreductase domain CF65_02047 IPR036291 NAD(P)-binding domain superfamily CF65_02047 IPR013149 Alcohol dehydrogenase, C-terminal CF65_02047 IPR013154 Alcohol dehydrogenase, N-terminal CF65_02048 IPR036390 Winged helix DNA-binding domain superfamily CF65_02048 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02048 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CF65_02048 IPR001034 DeoR-type HTH domain CF65_02048 IPR014036 DeoR C-terminal sensor domain CF65_02048 IPR037171 NagB/RpiA transferase-like CF65_02050 IPR020826 Transketolase binding site CF65_02050 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02050 IPR005474 Transketolase, N-terminal CF65_02050 IPR029061 Thiamin diphosphate-binding fold CF65_02050 IPR005477 Deoxyxylulose-5-phosphate synthase CF65_02050 IPR033248 Transketolase, C-terminal domain CF65_02050 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CF65_02051 IPR008949 Isoprenoid synthase domain superfamily CF65_02051 IPR000092 Polyprenyl synthetase CF65_02051 IPR033749 Polyprenyl synthetase, conserved site CF65_02052 IPR037004 Exonuclease VII, small subunit superfamily CF65_02052 IPR003761 Exonuclease VII, small subunit CF65_02053 IPR034733 Acetyl-CoA carboxylase CF65_02053 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CF65_02053 IPR029045 ClpP/crotonase-like domain superfamily CF65_02053 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CF65_02053 IPR041010 Acetyl-coA carboxylase zinc finger domain CF65_02056 IPR036615 Mur ligase, C-terminal domain superfamily CF65_02056 IPR036565 Mur-like, catalytic domain superfamily CF65_02056 IPR018109 Folylpolyglutamate synthetase, conserved site CF65_02056 IPR001645 Folylpolyglutamate synthetase CF65_02056 IPR013221 Mur ligase, central CF65_02057 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CF65_02057 IPR029033 Histidine phosphatase superfamily CF65_02057 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_02057 IPR017578 Alpha-ribazole phosphatase, CobC CF65_02060 IPR022924 Cardiolipin synthase CF65_02060 IPR030840 Cardiolipin synthase A CF65_02060 IPR025202 Phospholipase D-like domain CF65_02060 IPR001736 Phospholipase D/Transphosphatidylase CF65_02060 IPR027379 Cardiolipin synthase N-terminal CF65_02062 IPR005642 Lysine exporter LysO CF65_02063 IPR020103 Pseudouridine synthase, catalytic domain superfamily CF65_02063 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CF65_02063 IPR006145 Pseudouridine synthase, RsuA/RluA CF65_02063 IPR006508 Pseudouridine synthase, RluA-like CF65_02069 IPR013987 PhnA protein, N-terminal CF65_02069 IPR004624 PhnA protein CF65_02069 IPR013988 PhnA protein, C-terminal CF65_02077 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CF65_02077 IPR003423 Outer membrane efflux protein CF65_02080 IPR003838 ABC transporter permease protein domain CF65_02080 IPR003593 AAA+ ATPase domain CF65_02080 IPR003439 ABC transporter-like CF65_02080 IPR017911 ABC transporter, macrolide export, ATP-binding domain CF65_02080 IPR025857 MacB-like periplasmic core domain CF65_02080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02080 IPR017871 ABC transporter, conserved site CF65_02081 IPR006143 RND efflux pump, membrane fusion protein CF65_02081 IPR030190 Macrolide export protein MacA CF65_02081 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CF65_02082 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02082 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CF65_02082 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_02082 IPR004514 Glutamine-tRNA synthetase CF65_02082 IPR022861 Glutamine-tRNA ligase, bacterial CF65_02082 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CF65_02082 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain CF65_02082 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CF65_02082 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CF65_02082 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily CF65_02084 IPR008228 Uncharacterised conserved protein UCP006173 CF65_02087 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CF65_02087 IPR017853 Glycoside hydrolase superfamily CF65_02087 IPR037439 1,4-alpha-glucan-branching enzyme CF65_02087 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta CF65_02087 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CF65_02087 IPR004193 Glycoside hydrolase, family 13, N-terminal CF65_02087 IPR013780 Glycosyl hydrolase, all-beta CF65_02087 IPR014756 Immunoglobulin E-set CF65_02087 IPR013783 Immunoglobulin-like fold CF65_02088 IPR013780 Glycosyl hydrolase, all-beta CF65_02088 IPR004193 Glycoside hydrolase, family 13, N-terminal CF65_02088 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CF65_02088 IPR040784 Glycogen debranching enzyme, C-terminal domain CF65_02088 IPR017853 Glycoside hydrolase superfamily CF65_02088 IPR013783 Immunoglobulin-like fold CF65_02088 IPR014756 Immunoglobulin E-set CF65_02088 IPR011837 Glycogen debranching enzyme, GlgX type CF65_02089 IPR014756 Immunoglobulin E-set CF65_02089 IPR017853 Glycoside hydrolase superfamily CF65_02089 IPR011837 Glycogen debranching enzyme, GlgX type CF65_02089 IPR013780 Glycosyl hydrolase, all-beta CF65_02089 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CF65_02089 IPR040784 Glycogen debranching enzyme, C-terminal domain CF65_02089 IPR004193 Glycoside hydrolase, family 13, N-terminal CF65_02089 IPR013783 Immunoglobulin-like fold CF65_02090 IPR011831 Glucose-1-phosphate adenylyltransferase CF65_02090 IPR005836 ADP-glucose pyrophosphorylase, conserved site CF65_02090 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial CF65_02090 IPR005835 Nucleotidyl transferase domain CF65_02090 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02090 IPR011004 Trimeric LpxA-like superfamily CF65_02092 IPR011835 Bacterial/plant glycogen synthase CF65_02092 IPR001296 Glycosyl transferase, family 1 CF65_02092 IPR013534 Starch synthase, catalytic domain CF65_02094 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CF65_02094 IPR000811 Glycosyl transferase, family 35 CF65_02094 IPR035090 Phosphorylase pyridoxal-phosphate attachment site CF65_02097 IPR032816 SNARE associated Golgi protein CF65_02097 IPR032818 DedA family CF65_02099 IPR029751 Ribosomal protein L25 CF65_02099 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CF65_02099 IPR020055 Ribosomal protein L25, short-form CF65_02099 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CF65_02101 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CF65_02101 IPR012338 Beta-lactamase/transpeptidase-like CF65_02101 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CF65_02103 IPR012338 Beta-lactamase/transpeptidase-like CF65_02103 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CF65_02103 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CF65_02105 IPR033439 Chromosome partition protein MukF, winged-helix domain CF65_02105 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02105 IPR036390 Winged helix DNA-binding domain superfamily CF65_02105 IPR033440 Chromosome partition protein MukF, middle domain CF65_02105 IPR038198 MukF, C-terminal domain superfamily CF65_02105 IPR033441 Chromosome partition protein MukF, C-terminal domain CF65_02105 IPR005582 Chromosome partition protein MukF CF65_02105 IPR036141 MukF, middle domain superfamily CF65_02108 IPR023775 Bifunctional protein Aas CF65_02108 IPR002123 Phospholipid/glycerol acyltransferase CF65_02108 IPR042099 AMP-dependent synthetase-like superfamily CF65_02108 IPR000873 AMP-dependent synthetase/ligase CF65_02108 IPR020845 AMP-binding, conserved site CF65_02111 IPR042037 MukE, C-terminal domain CF65_02111 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE CF65_02111 IPR042038 MukE, N-terminal domain CF65_02112 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02112 IPR012090 Chromosome partition protein MukB CF65_02112 IPR032520 MukB, hinge domain CF65_02112 IPR007406 MukB, N-terminal domain CF65_02114 IPR034747 Exonuclease I, SH3-like domain CF65_02114 IPR038649 Exonuclease I, SH3-like domain superfamily CF65_02114 IPR036397 Ribonuclease H superfamily CF65_02114 IPR012337 Ribonuclease H-like superfamily CF65_02114 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_02114 IPR034748 Exonuclease I, C-terminal alpha-helical domain CF65_02114 IPR023607 Exodeoxyribonuclease I CF65_02114 IPR013620 Exodeoxyribonuclease I, C-terminal CF65_02117 IPR036397 Ribonuclease H superfamily CF65_02117 IPR012337 Ribonuclease H-like superfamily CF65_02117 IPR001584 Integrase, catalytic core CF65_02117 IPR038965 Transposase InsF-like CF65_02117 IPR025948 HTH-like domain CF65_02120 IPR041719 Ferritin, prokaryotic-type CF65_02120 IPR001519 Ferritin CF65_02120 IPR012347 Ferritin-like CF65_02120 IPR009040 Ferritin-like diiron domain CF65_02120 IPR009078 Ferritin-like superfamily CF65_02120 IPR008331 Ferritin/DPS protein domain CF65_02121 IPR008331 Ferritin/DPS protein domain CF65_02121 IPR009078 Ferritin-like superfamily CF65_02121 IPR009040 Ferritin-like diiron domain CF65_02121 IPR012347 Ferritin-like CF65_02121 IPR041719 Ferritin, prokaryotic-type CF65_02121 IPR001519 Ferritin CF65_02124 IPR014710 RmlC-like jelly roll fold CF65_02124 IPR018335 Transcription regulator HTH, Crp-type, conserved site CF65_02124 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02124 IPR036390 Winged helix DNA-binding domain superfamily CF65_02124 IPR018490 Cyclic nucleotide-binding-like CF65_02124 IPR012318 Crp-type HTH domain CF65_02124 IPR000595 Cyclic nucleotide-binding domain CF65_02125 IPR006016 UspA CF65_02126 IPR019613 Protein of unknown function DUF4198 CF65_02128 IPR013498 DNA topoisomerase, type IA, zn finger CF65_02128 IPR028612 DNA topoisomerase I, type IA CF65_02128 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type CF65_02128 IPR005733 DNA topoisomerase I, bacterial-type CF65_02128 IPR006171 TOPRIM domain CF65_02128 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CF65_02128 IPR023405 DNA topoisomerase, type IA, core domain CF65_02128 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CF65_02128 IPR034149 DNA topoisomerase 1, TOPRIM domain CF65_02128 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CF65_02128 IPR013497 DNA topoisomerase, type IA, central CF65_02128 IPR023406 DNA topoisomerase, type IA, active site CF65_02128 IPR003601 DNA topoisomerase, type IA, domain 2 CF65_02128 IPR000380 DNA topoisomerase, type IA CF65_02128 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CF65_02131 IPR016195 Polymerase/histidinol phosphatase-like CF65_02131 IPR003141 Polymerase/histidinol phosphatase, N-terminal CF65_02131 IPR004013 PHP domain CF65_02132 IPR013785 Aldolase-type TIM barrel CF65_02132 IPR001295 Dihydroorotate dehydrogenase, conserved site CF65_02132 IPR005720 Dihydroorotate dehydrogenase domain CF65_02132 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CF65_02132 IPR005719 Dihydroorotate dehydrogenase, class 2 CF65_02134 IPR027268 Peptidase M4/M1, CTD superfamily CF65_02134 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CF65_02134 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily CF65_02134 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CF65_02134 IPR012779 Peptidase M1, alanyl aminopeptidase CF65_02134 IPR014782 Peptidase M1, membrane alanine aminopeptidase CF65_02134 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily CF65_02134 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CF65_02134 IPR042097 Aminopeptidase N-like , N-terminal CF65_02136 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_02136 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_02136 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02136 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CF65_02136 IPR000796 Aspartate/other aminotransferase CF65_02136 IPR004839 Aminotransferase, class I/classII CF65_02139 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CF65_02140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02140 IPR017871 ABC transporter, conserved site CF65_02140 IPR003593 AAA+ ATPase domain CF65_02140 IPR000412 ABC-2 transporter CF65_02140 IPR003439 ABC transporter-like CF65_02141 IPR000412 ABC-2 transporter CF65_02146 IPR003593 AAA+ ATPase domain CF65_02146 IPR003439 ABC transporter-like CF65_02146 IPR017871 ABC transporter, conserved site CF65_02146 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02150 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CF65_02150 IPR038722 Ner, winged helix-turn-helix DNA-binding domain CF65_02151 IPR010917 TonB-dependent receptor, conserved site CF65_02151 IPR010105 TonB-dependent siderophore receptor CF65_02151 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_02151 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_02151 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_02151 IPR012910 TonB-dependent receptor, plug domain CF65_02151 IPR039426 Vitamin B12 transporter BtuB-like CF65_02152 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02152 IPR017871 ABC transporter, conserved site CF65_02152 IPR003439 ABC transporter-like CF65_02152 IPR003593 AAA+ ATPase domain CF65_02158 IPR039423 TonB-dependent receptor-like CF65_02158 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_02158 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_02160 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CF65_02160 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type CF65_02160 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase CF65_02160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02162 IPR038765 Papain-like cysteine peptidase superfamily CF65_02162 IPR000064 Endopeptidase, NLPC/P60 domain CF65_02163 IPR020816 Histone-like DNA-binding protein, conserved site CF65_02163 IPR000119 Histone-like DNA-binding protein CF65_02163 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CF65_02163 IPR005684 Integration host factor, alpha subunit CF65_02164 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CF65_02164 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CF65_02164 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CF65_02164 IPR012340 Nucleic acid-binding, OB-fold CF65_02164 IPR005146 B3/B4 tRNA-binding domain CF65_02164 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CF65_02164 IPR005121 Ferrodoxin-fold anticodon-binding domain CF65_02164 IPR002547 tRNA-binding domain CF65_02164 IPR005147 tRNA synthetase, B5-domain CF65_02164 IPR009061 Putative DNA-binding domain superfamily CF65_02164 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CF65_02166 IPR006195 Aminoacyl-tRNA synthetase, class II CF65_02166 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CF65_02166 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CF65_02166 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CF65_02166 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CF65_02166 IPR002319 Phenylalanyl-tRNA synthetase CF65_02168 IPR022919 Peptidase M48, protease HtpX, putative CF65_02168 IPR001915 Peptidase M48 CF65_02171 IPR001347 Sugar isomerase (SIS) CF65_02171 IPR035474 KpsF-like, SIS domain CF65_02171 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CF65_02171 IPR000644 CBS domain CF65_02172 IPR010023 KdsC family CF65_02172 IPR023214 HAD superfamily CF65_02172 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CF65_02172 IPR036412 HAD-like superfamily CF65_02173 IPR005801 ADC synthase CF65_02173 IPR019999 Anthranilate synthase component I-like CF65_02173 IPR006805 Anthranilate synthase component I, N-terminal CF65_02173 IPR015890 Chorismate-utilising enzyme, C-terminal CF65_02173 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial CF65_02175 IPR029062 Class I glutamine amidotransferase-like CF65_02175 IPR017926 Glutamine amidotransferase CF65_02175 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CF65_02177 IPR037479 Tautomerase, MSAD family CF65_02177 IPR014347 Tautomerase/MIF superfamily CF65_02179 IPR000312 Glycosyl transferase, family 3 CF65_02179 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CF65_02179 IPR005940 Anthranilate phosphoribosyl transferase CF65_02179 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CF65_02179 IPR017459 Glycosyl transferase family 3, N-terminal domain CF65_02181 IPR013430 Toxin-antitoxin system, antidote protein, HigA CF65_02181 IPR001387 Cro/C1-type helix-turn-helix domain CF65_02181 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CF65_02182 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CF65_02182 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CF65_02182 IPR013798 Indole-3-glycerol phosphate synthase CF65_02182 IPR013785 Aldolase-type TIM barrel CF65_02182 IPR011060 Ribulose-phosphate binding barrel CF65_02184 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CF65_02184 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CF65_02184 IPR013785 Aldolase-type TIM barrel CF65_02184 IPR011060 Ribulose-phosphate binding barrel CF65_02184 IPR013798 Indole-3-glycerol phosphate synthase CF65_02190 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CF65_02190 IPR037254 HupF/HypC superfamily CF65_02190 IPR019812 Hydrogenase assembly chaperone, conserved site CF65_02193 IPR005899 Sodium ion-translocating decarboxylase CF65_02193 IPR023424 Oxaloacetate decarboxylase gamma chain, probable CF65_02195 IPR000891 Pyruvate carboxyltransferase CF65_02195 IPR013785 Aldolase-type TIM barrel CF65_02195 IPR001882 Biotin-binding site CF65_02195 IPR000089 Biotin/lipoyl attachment CF65_02195 IPR003379 Carboxylase, conserved domain CF65_02195 IPR005776 Oxaloacetate decarboxylase, alpha subunit CF65_02195 IPR011053 Single hybrid motif CF65_02196 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit CF65_02201 IPR010916 TonB box, conserved site CF65_02201 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CF65_02201 IPR039426 Vitamin B12 transporter BtuB-like CF65_02201 IPR012910 TonB-dependent receptor, plug domain CF65_02201 IPR010948 TonB-dependent lactoferrin/transferrin receptor CF65_02201 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_02201 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_02201 IPR010917 TonB-dependent receptor, conserved site CF65_02202 IPR010948 TonB-dependent lactoferrin/transferrin receptor CF65_02202 IPR012910 TonB-dependent receptor, plug domain CF65_02202 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_02202 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_02202 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CF65_02202 IPR010917 TonB-dependent receptor, conserved site CF65_02202 IPR010916 TonB box, conserved site CF65_02202 IPR039426 Vitamin B12 transporter BtuB-like CF65_02205 IPR020904 Short-chain dehydrogenase/reductase, conserved site CF65_02205 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02205 IPR036291 NAD(P)-binding domain superfamily CF65_02206 IPR001926 Pyridoxal-phosphate dependent enzyme CF65_02206 IPR006653 Tryptophan synthase, beta chain, conserved site CF65_02206 IPR006654 Tryptophan synthase, beta chain CF65_02206 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_02206 IPR023026 Tryptophan synthase beta chain/beta chain-like CF65_02208 IPR013785 Aldolase-type TIM barrel CF65_02208 IPR011060 Ribulose-phosphate binding barrel CF65_02208 IPR018204 Tryptophan synthase, alpha chain, active site CF65_02208 IPR002028 Tryptophan synthase, alpha chain CF65_02210 IPR013346 Ribonucleotide reductase, class I , alpha subunit CF65_02210 IPR000788 Ribonucleotide reductase large subunit, C-terminal CF65_02210 IPR013509 Ribonucleotide reductase large subunit, N-terminal CF65_02210 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CF65_02210 IPR039718 Ribonucleoside-diphosphate reductase large subunit CF65_02210 IPR005144 ATP-cone domain CF65_02214 IPR036918 Pyruvate kinase, C-terminal domain superfamily CF65_02214 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CF65_02214 IPR015795 Pyruvate kinase, C-terminal CF65_02214 IPR040442 Pyruvate kinase-like domain superfamily CF65_02214 IPR011037 Pyruvate kinase-like, insert domain superfamily CF65_02214 IPR018209 Pyruvate kinase, active site CF65_02214 IPR015806 Pyruvate kinase, insert domain superfamily CF65_02214 IPR001697 Pyruvate kinase CF65_02214 IPR015793 Pyruvate kinase, barrel CF65_02215 IPR011008 Dimeric alpha-beta barrel CF65_02215 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase CF65_02215 IPR007138 Antibiotic biosynthesis monooxygenase domain CF65_02217 IPR041720 Aldolase FbaB-like, archaeal-type CF65_02217 IPR002915 DeoC/FbaB/ lacD aldolase CF65_02217 IPR013785 Aldolase-type TIM barrel CF65_02218 IPR041720 Aldolase FbaB-like, archaeal-type CF65_02218 IPR002915 DeoC/FbaB/ lacD aldolase CF65_02218 IPR013785 Aldolase-type TIM barrel CF65_02219 IPR025997 Periplasmic binding protein CF65_02219 IPR028082 Periplasmic binding protein-like I CF65_02219 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB CF65_02220 IPR001851 ABC transporter, permease CF65_02224 IPR001851 ABC transporter, permease CF65_02225 IPR003439 ABC transporter-like CF65_02225 IPR003593 AAA+ ATPase domain CF65_02225 IPR017871 ABC transporter, conserved site CF65_02225 IPR030281 Autoinducer 2 import ATP-binding protein LsrA CF65_02225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02226 IPR017871 ABC transporter, conserved site CF65_02226 IPR003439 ABC transporter-like CF65_02226 IPR003593 AAA+ ATPase domain CF65_02226 IPR030281 Autoinducer 2 import ATP-binding protein LsrA CF65_02226 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02228 IPR037171 NagB/RpiA transferase-like CF65_02228 IPR007324 Sugar-binding domain, putative CF65_02228 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02228 IPR012318 Crp-type HTH domain CF65_02230 IPR018484 Carbohydrate kinase, FGGY, N-terminal CF65_02230 IPR018485 Carbohydrate kinase, FGGY, C-terminal CF65_02230 IPR033676 Autoinducer-2 kinase CF65_02230 IPR000577 Carbohydrate kinase, FGGY CF65_02231 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02231 IPR004472 Dethiobiotin synthase BioD CF65_02232 IPR036390 Winged helix DNA-binding domain superfamily CF65_02232 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02232 IPR000600 ROK family CF65_02233 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CF65_02233 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CF65_02233 IPR006195 Aminoacyl-tRNA synthetase, class II CF65_02233 IPR012340 Nucleic acid-binding, OB-fold CF65_02233 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CF65_02233 IPR004522 Asparagine-tRNA ligase CF65_02235 IPR007481 Stringent starvation protein B CF65_02235 IPR036760 SspB-like superfamily CF65_02236 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CF65_02236 IPR010987 Glutathione S-transferase, C-terminal-like CF65_02236 IPR034341 Stringent starvation protein A, N-terminal CF65_02236 IPR004046 Glutathione S-transferase, C-terminal CF65_02236 IPR040079 Glutathione Transferase family CF65_02236 IPR004045 Glutathione S-transferase, N-terminal CF65_02236 IPR036249 Thioredoxin-like superfamily CF65_02237 IPR003448 Molybdopterin biosynthesis MoaE CF65_02237 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CF65_02239 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CF65_02239 IPR012675 Beta-grasp domain superfamily CF65_02239 IPR003749 Sulfur carrier ThiS/MoaD-like CF65_02241 IPR023045 Molybdenum cofactor biosynthesis C CF65_02241 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CF65_02241 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CF65_02242 IPR007197 Radical SAM CF65_02242 IPR006638 Elp3/MiaB/NifB CF65_02242 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CF65_02242 IPR013483 Molybdenum cofactor biosynthesis protein A CF65_02242 IPR010505 Molybdenum cofactor synthesis C-terminal CF65_02242 IPR013785 Aldolase-type TIM barrel CF65_02243 IPR038136 Gluconeogenesis factor superfamily CF65_02243 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CF65_02243 IPR010119 Gluconeogenesis factor CF65_02246 IPR005320 Peptidase S51 CF65_02246 IPR029062 Class I glutamine amidotransferase-like CF65_02246 IPR023172 Peptidase S51, dipeptidase E CF65_02249 IPR036873 Rhodanese-like domain superfamily CF65_02249 IPR001763 Rhodanese-like domain CF65_02249 IPR020536 Thil, AANH domain CF65_02249 IPR004114 THUMP domain CF65_02249 IPR003720 tRNA sulfurtransferase ThiI CF65_02249 IPR026340 Thiazole biosynthesis domain CF65_02249 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02250 IPR036280 Multiheme cytochrome superfamily CF65_02250 IPR005126 NapC/NirT cytochrome c, N-terminal CF65_02250 IPR011031 Multihaem cytochrome CF65_02250 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK CF65_02250 IPR036909 Cytochrome c-like domain superfamily CF65_02250 IPR038266 NapC/NirT cytochrome c superfamily CF65_02251 IPR006656 Molybdopterin oxidoreductase CF65_02251 IPR006311 Twin-arginine translocation pathway, signal sequence CF65_02251 IPR009010 Aspartate decarboxylase-like domain superfamily CF65_02251 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase CF65_02251 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain CF65_02251 IPR041460 Molybdopterin oxidoreductase, N-terminal CF65_02251 IPR006657 Molybdopterin dinucleotide-binding domain CF65_02251 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CF65_02252 IPR007351 Uncharacterised protein YjbR CF65_02252 IPR038056 YjbR-like superfamily CF65_02254 IPR030676 Citrate carrier CitT-related CF65_02254 IPR001898 Solute carrier family 13 CF65_02259 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CF65_02259 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_02260 IPR020095 Pseudouridine synthase I, TruA, C-terminal CF65_02260 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CF65_02260 IPR001406 Pseudouridine synthase I, TruA CF65_02260 IPR020103 Pseudouridine synthase, catalytic domain superfamily CF65_02261 IPR000754 Ribosomal protein S9 CF65_02261 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02261 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02261 IPR023035 Ribosomal protein S9, bacterial/plastid CF65_02261 IPR020574 Ribosomal protein S9, conserved site CF65_02262 IPR023563 Ribosomal protein L13, conserved site CF65_02262 IPR036899 Ribosomal protein L13 superfamily CF65_02262 IPR005822 Ribosomal protein L13 CF65_02262 IPR005823 Ribosomal protein L13, bacterial-type CF65_02265 IPR027785 UvrD-like helicase C-terminal domain CF65_02265 IPR006344 RecBCD enzyme subunit RecD CF65_02265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02265 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain CF65_02266 IPR000212 DNA helicase, UvrD/REP type CF65_02266 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CF65_02266 IPR004586 RecBCD enzyme subunit RecB CF65_02266 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02266 IPR011604 Exonuclease, phage-type/RecB, C-terminal CF65_02266 IPR014017 UvrD-like DNA helicase, C-terminal CF65_02266 IPR034739 UvrD/AddA helicase, N-terminal CF65_02266 IPR014016 UvrD-like helicase, ATP-binding domain CF65_02266 IPR011335 Restriction endonuclease type II-like CF65_02267 IPR003787 Sulphur relay, DsrE/F-like protein CF65_02267 IPR027396 DsrEFH-like CF65_02269 IPR029069 HotDog domain superfamily CF65_02269 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CF65_02269 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA CF65_02270 IPR008269 Peptidase S16, Lon proteolytic domain CF65_02270 IPR041699 Lon protease, AAA domain CF65_02270 IPR027065 Lon protease CF65_02270 IPR008268 Peptidase S16, active site CF65_02270 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02270 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02272 IPR013321 Arc-type ribbon-helix-helix CF65_02272 IPR009390 Macrodomain Ter protein, MatP CF65_02272 IPR035375 MatP, C-terminal ribbon-helix-helix domain CF65_02272 IPR035087 MatP, N-terminal CF65_02272 IPR038339 MatP, N-terminal domain superfamily CF65_02273 IPR011129 Cold shock domain CF65_02273 IPR012156 Cold shock, CspA CF65_02273 IPR019844 Cold-shock (CSD) domain CF65_02273 IPR002059 Cold-shock protein, DNA-binding CF65_02273 IPR012340 Nucleic acid-binding, OB-fold CF65_02273 IPR012751 CspD, cold shock CF65_02275 IPR005371 Uncharacterised protein family UPF0181 CF65_02276 IPR006145 Pseudouridine synthase, RsuA/RluA CF65_02276 IPR020103 Pseudouridine synthase, catalytic domain superfamily CF65_02276 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CF65_02278 IPR023376 YqcC-like domain CF65_02278 IPR036814 YqcC-like superfamily CF65_02278 IPR007384 Protein of unknown function UCP006257 CF65_02279 IPR016908 Uncharacterised conserved protein UCP029037 CF65_02280 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CF65_02280 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal CF65_02280 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 CF65_02281 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CF65_02281 IPR009057 Homeobox-like domain superfamily CF65_02281 IPR003593 AAA+ ATPase domain CF65_02281 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02281 IPR002197 DNA binding HTH domain, Fis-type CF65_02281 IPR001789 Signal transduction response regulator, receiver domain CF65_02281 IPR025944 Sigma-54 interaction domain, conserved site CF65_02281 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CF65_02281 IPR002078 RNA polymerase sigma factor 54 interaction domain CF65_02281 IPR011006 CheY-like superfamily CF65_02282 IPR002197 DNA binding HTH domain, Fis-type CF65_02282 IPR025944 Sigma-54 interaction domain, conserved site CF65_02282 IPR002078 RNA polymerase sigma factor 54 interaction domain CF65_02282 IPR001789 Signal transduction response regulator, receiver domain CF65_02282 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02282 IPR009057 Homeobox-like domain superfamily CF65_02282 IPR011006 CheY-like superfamily CF65_02283 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02283 IPR039420 Transcriptional regulatory protein WalR-like CF65_02283 IPR011006 CheY-like superfamily CF65_02283 IPR001867 OmpR/PhoB-type DNA-binding domain CF65_02283 IPR001789 Signal transduction response regulator, receiver domain CF65_02284 IPR003594 Histidine kinase/HSP90-like ATPase CF65_02284 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_02284 IPR005467 Histidine kinase domain CF65_02284 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CF65_02284 IPR003660 HAMP domain CF65_02284 IPR017116 Signal transduction histidine kinase, PgtB CF65_02284 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CF65_02286 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CF65_02286 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02286 IPR008995 Molybdate/tungstate binding, C-terminal CF65_02286 IPR017871 ABC transporter, conserved site CF65_02286 IPR003439 ABC transporter-like CF65_02286 IPR013611 Transport-associated OB, type 2 CF65_02286 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CF65_02286 IPR003593 AAA+ ATPase domain CF65_02288 IPR007411 Elongation factor P hydroxylase CF65_02289 IPR003959 ATPase, AAA-type, core CF65_02289 IPR005936 Peptidase, FtsH CF65_02289 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02289 IPR041569 AAA ATPase, AAA+ lid domain CF65_02289 IPR003593 AAA+ ATPase domain CF65_02289 IPR011546 Peptidase M41, FtsH extracellular CF65_02289 IPR003960 ATPase, AAA-type, conserved site CF65_02289 IPR000642 Peptidase M41 CF65_02289 IPR037219 Peptidase M41-like CF65_02290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02290 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria CF65_02290 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CF65_02290 IPR015507 Ribosomal RNA large subunit methyltransferase E CF65_02291 IPR036477 Formyl transferase, N-terminal domain superfamily CF65_02291 IPR002376 Formyl transferase, N-terminal CF65_02291 IPR004810 Formyltetrahydrofolate deformylase CF65_02291 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CF65_02291 IPR002912 ACT domain CF65_02292 IPR027444 Histone-like protein H-NS, C-terminal domain CF65_02292 IPR027454 Histone-like protein H-NS, N-terminal CF65_02292 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily CF65_02292 IPR001801 Histone-like protein H-NS CF65_02294 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CF65_02300 IPR033134 Asp/Glu racemase, active site 2 CF65_02300 IPR015942 Asp/Glu/hydantoin racemase CF65_02300 IPR004391 Glutamate racemase CF65_02300 IPR018187 Asp/Glu racemase, active site 1 CF65_02300 IPR001920 Asp/Glu racemase CF65_02301 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CF65_02301 IPR007440 Chorismate--pyruvate lyase CF65_02303 IPR001650 Helicase, C-terminal CF65_02303 IPR012340 Nucleic acid-binding, OB-fold CF65_02303 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_02303 IPR011545 DEAD/DEAH box helicase domain CF65_02303 IPR004609 ATP-dependent DNA helicase RecG CF65_02303 IPR033454 RecG, wedge domain CF65_02303 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02305 IPR002912 ACT domain CF65_02305 IPR012675 Beta-grasp domain superfamily CF65_02305 IPR003607 HD/PDEase domain CF65_02305 IPR004811 RelA/SpoT family CF65_02305 IPR007685 RelA/SpoT CF65_02305 IPR004095 TGS CF65_02305 IPR012676 TGS-like CF65_02305 IPR033655 RelA, TGS domain CF65_02306 IPR036161 RPB6/omega subunit-like superfamily CF65_02306 IPR012293 RNA polymerase subunit, RPB6/omega CF65_02306 IPR006110 RNA polymerase, subunit omega/K/RPB6 CF65_02306 IPR003716 DNA-directed RNA polymerase, omega subunit CF65_02307 IPR017665 Guanylate kinase CF65_02307 IPR008144 Guanylate kinase-like domain CF65_02307 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CF65_02307 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02307 IPR020590 Guanylate kinase, conserved site CF65_02309 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CF65_02309 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CF65_02309 IPR036291 NAD(P)-binding domain superfamily CF65_02309 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CF65_02309 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CF65_02309 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CF65_02310 IPR000620 EamA domain CF65_02312 IPR023393 START-like domain superfamily CF65_02312 IPR005031 Coenzyme Q-binding protein COQ10, START domain CF65_02313 IPR037021 RnfH superfamily CF65_02313 IPR005346 RnfH protein CF65_02313 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CF65_02315 IPR003347 JmjC domain CF65_02315 IPR039994 JmjC domain-containing CF65_02316 IPR020579 Exonuclease VII, large subunit, C-terminal CF65_02316 IPR003753 Exonuclease VII, large subunit CF65_02316 IPR025824 OB-fold nucleic acid binding domain CF65_02317 IPR005337 RapZ-like family CF65_02317 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02319 IPR016152 Phosphotransferase/anion transporter CF65_02319 IPR002178 PTS EIIA type-2 domain CF65_02319 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN CF65_02320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02320 IPR017871 ABC transporter, conserved site CF65_02320 IPR003439 ABC transporter-like CF65_02320 IPR003593 AAA+ ATPase domain CF65_02320 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CF65_02320 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CF65_02321 IPR014340 Lipopolysaccharide export system protein LptA CF65_02321 IPR005653 Organic solvent tolerance-like, N-terminal CF65_02323 IPR026265 Lipopolysaccharide export system protein LptC CF65_02323 IPR010664 Lipopolysaccharide assembly, LptC-related CF65_02324 IPR003593 AAA+ ATPase domain CF65_02324 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CF65_02324 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02324 IPR017871 ABC transporter, conserved site CF65_02324 IPR003439 ABC transporter-like CF65_02325 IPR030802 ABC transporter permease MalE CF65_02325 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CF65_02326 IPR003399 Mce/MlaD CF65_02326 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD CF65_02327 IPR042245 Tgt2/MlaC superfamily CF65_02327 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CF65_02328 IPR036513 STAS domain superfamily CF65_02328 IPR002645 STAS domain CF65_02329 IPR036065 BolA-like superfamily CF65_02329 IPR002634 BolA protein CF65_02330 IPR036968 Enolpyruvate transferase domain superfamily CF65_02330 IPR001986 Enolpyruvate transferase domain CF65_02330 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CF65_02330 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CF65_02331 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02331 IPR003593 AAA+ ATPase domain CF65_02331 IPR011527 ABC transporter type 1, transmembrane domain CF65_02331 IPR036640 ABC transporter type 1, transmembrane domain superfamily CF65_02331 IPR003439 ABC transporter-like CF65_02331 IPR039421 Type I protein exporter CF65_02331 IPR017871 ABC transporter, conserved site CF65_02331 IPR033838 Colicin V processing peptidase CF65_02331 IPR005074 Peptidase C39, bacteriocin processing CF65_02332 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_02332 IPR026499 Peptide S-glycosyltransferase, SunS family CF65_02332 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02332 IPR001173 Glycosyltransferase 2-like CF65_02333 IPR005272 Conserved hypothetical protein CHP00743 CF65_02333 IPR035571 UPF0234-like, C-terminal CF65_02334 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CF65_02334 IPR042117 OMPP1/FadL/TodX superfamily CF65_02335 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CF65_02335 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CF65_02335 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CF65_02335 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CF65_02335 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CF65_02335 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02335 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CF65_02337 IPR011335 Restriction endonuclease type II-like CF65_02337 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily CF65_02337 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II CF65_02337 IPR004230 DNA mismatch repair protein MutH CF65_02338 IPR005496 Integral membrane protein TerC CF65_02342 IPR036397 Ribonuclease H superfamily CF65_02342 IPR012337 Ribonuclease H-like superfamily CF65_02342 IPR001584 Integrase, catalytic core CF65_02342 IPR038965 Transposase InsF-like CF65_02342 IPR025948 HTH-like domain CF65_02343 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CF65_02343 IPR008146 Glutamine synthetase, catalytic domain CF65_02343 IPR027303 Glutamine synthetase, glycine-rich site CF65_02343 IPR004809 Glutamine synthetase type I CF65_02343 IPR036651 Glutamine synthetase, N-terminal domain superfamily CF65_02343 IPR008147 Glutamine synthetase, beta-Grasp domain CF65_02343 IPR001637 Glutamine synthetase class-I, adenylation site CF65_02343 IPR027302 Glutamine synthetase, N-terminal conserved site CF65_02347 IPR005546 Autotransporter beta-domain CF65_02347 IPR036709 Autotransporter beta-domain superfamily CF65_02347 IPR012332 P22 tailspike-like, C-terminal domain superfamily CF65_02347 IPR004899 Pertactin, central region CF65_02347 IPR000710 Peptidase S6, IgA endopeptidase CF65_02347 IPR030396 Peptidase family S6 domain CF65_02347 IPR011050 Pectin lyase fold/virulence factor CF65_02348 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CF65_02348 IPR036249 Thioredoxin-like superfamily CF65_02348 IPR013766 Thioredoxin domain CF65_02349 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CF65_02349 IPR002220 DapA-like CF65_02349 IPR020624 Schiff base-forming aldolase, conserved site CF65_02349 IPR013785 Aldolase-type TIM barrel CF65_02349 IPR020625 Schiff base-forming aldolase, active site CF65_02350 IPR042268 Outer membrane protein assembly factor BamC, C-terminal CF65_02350 IPR014524 Outer membrane protein assembly factor BamC CF65_02350 IPR010653 NlpB/DapX lipoprotein CF65_02351 IPR042268 Outer membrane protein assembly factor BamC, C-terminal CF65_02351 IPR010653 NlpB/DapX lipoprotein CF65_02351 IPR014524 Outer membrane protein assembly factor BamC CF65_02352 IPR035906 MetI-like superfamily CF65_02352 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_02353 IPR003593 AAA+ ATPase domain CF65_02353 IPR003439 ABC transporter-like CF65_02353 IPR017871 ABC transporter, conserved site CF65_02353 IPR000644 CBS domain CF65_02353 IPR005892 Glycine betaine transport ATP-binding subunit CF65_02353 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02354 IPR001608 Alanine racemase, N-terminal CF65_02354 IPR011078 Pyridoxal phosphate homeostasis protein CF65_02354 IPR029066 PLP-binding barrel CF65_02357 IPR018042 Aspartate kinase, conserved site CF65_02357 IPR036291 NAD(P)-binding domain superfamily CF65_02357 IPR002912 ACT domain CF65_02357 IPR001048 Aspartate/glutamate/uridylate kinase CF65_02357 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I CF65_02357 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CF65_02357 IPR001341 Aspartate kinase CF65_02357 IPR036393 Acetylglutamate kinase-like superfamily CF65_02357 IPR027795 CASTOR, ACT domain CF65_02357 IPR019811 Homoserine dehydrogenase, conserved site CF65_02357 IPR001342 Homoserine dehydrogenase, catalytic CF65_02358 IPR000870 Homoserine kinase CF65_02358 IPR036554 GHMP kinase, C-terminal domain superfamily CF65_02358 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02358 IPR006203 GHMP kinase, ATP-binding, conserved site CF65_02358 IPR006204 GHMP kinase N-terminal domain CF65_02358 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02358 IPR013750 GHMP kinase, C-terminal domain CF65_02360 IPR029144 Threonine synthase, N-terminal CF65_02360 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_02360 IPR004450 Threonine synthase-like CF65_02360 IPR037158 Threonine synthase, N-terminal domain superfamily CF65_02360 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CF65_02360 IPR001926 Pyridoxal-phosphate dependent enzyme CF65_02362 IPR008278 4'-phosphopantetheinyl transferase domain CF65_02362 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CF65_02363 IPR010201 HflK CF65_02363 IPR036013 Band 7/SPFH domain superfamily CF65_02363 IPR001107 Band 7 domain CF65_02363 IPR001972 Stomatin family CF65_02365 IPR001107 Band 7 domain CF65_02365 IPR010200 HflC CF65_02365 IPR036013 Band 7/SPFH domain superfamily CF65_02367 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CF65_02367 IPR010994 RuvA domain 2-like CF65_02368 IPR029001 Inosine triphosphate pyrophosphatase-like CF65_02368 IPR002637 Ham1-like protein CF65_02368 IPR020922 dITP/XTP pyrophosphatase CF65_02369 IPR002765 Uncharacterised protein family UPF0145 CF65_02369 IPR035439 UPF0145 domain superfamily CF65_02371 IPR034505 Anaerobic coproporphyrinogen-III oxidase CF65_02371 IPR023404 Radical SAM, alpha/beta horseshoe CF65_02371 IPR006638 Elp3/MiaB/NifB CF65_02371 IPR010723 HemN, C-terminal CF65_02371 IPR004559 Heme chaperone HemW-like CF65_02371 IPR007197 Radical SAM CF65_02374 IPR037171 NagB/RpiA transferase-like CF65_02374 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CF65_02374 IPR004788 Ribose 5-phosphate isomerase, type A CF65_02375 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF65_02375 IPR036291 NAD(P)-binding domain superfamily CF65_02375 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CF65_02375 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CF65_02375 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CF65_02375 IPR002912 ACT domain CF65_02381 IPR000887 KDPG/KHG aldolase CF65_02381 IPR031337 KDPG/KHG aldolase, active site 1 CF65_02381 IPR031338 KDPG/KHG aldolase, active site 2 CF65_02381 IPR013785 Aldolase-type TIM barrel CF65_02382 IPR003766 Uronate isomerase CF65_02382 IPR032466 Metal-dependent hydrolase CF65_02383 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02383 IPR020904 Short-chain dehydrogenase/reductase, conserved site CF65_02383 IPR036291 NAD(P)-binding domain superfamily CF65_02384 IPR011611 Carbohydrate kinase PfkB CF65_02384 IPR029056 Ribokinase-like CF65_02384 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CF65_02385 IPR004682 TRAP transporter solute receptor, DctP family CF65_02385 IPR018389 TRAP transporter solute receptor DctP/TeaA CF65_02385 IPR038404 TRAP transporter solute receptor DctP superfamily CF65_02387 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CF65_02387 IPR004681 TRAP transporter large membrane protein DctM CF65_02388 IPR013780 Glycosyl hydrolase, all-beta CF65_02388 IPR017853 Glycoside hydrolase superfamily CF65_02388 IPR030458 Glycosyl hydrolases family 31, active site CF65_02388 IPR000322 Glycoside hydrolase family 31 CF65_02388 IPR025887 Glycoside hydrolase family 31, N-terminal domain CF65_02388 IPR030459 Glycosyl hydrolases family 31, conserved site CF65_02388 IPR033403 Domain of unknown function DUF5110 CF65_02388 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 CF65_02388 IPR011013 Galactose mutarotase-like domain superfamily CF65_02389 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02389 IPR036390 Winged helix DNA-binding domain superfamily CF65_02389 IPR008920 Transcription regulator FadR/GntR, C-terminal CF65_02389 IPR011711 GntR, C-terminal CF65_02389 IPR000524 Transcription regulator HTH, GntR CF65_02390 IPR036237 Xylose isomerase-like superfamily CF65_02390 IPR004628 Mannonate dehydratase CF65_02393 IPR011547 SLC26A/SulP transporter domain CF65_02393 IPR036513 STAS domain superfamily CF65_02393 IPR002645 STAS domain CF65_02393 IPR018045 Sulphate anion transporter, conserved site CF65_02393 IPR001902 SLC26A/SulP transporter CF65_02395 IPR027543 Lon protease, bacterial CF65_02395 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02395 IPR003959 ATPase, AAA-type, core CF65_02395 IPR003593 AAA+ ATPase domain CF65_02395 IPR008269 Peptidase S16, Lon proteolytic domain CF65_02395 IPR027065 Lon protease CF65_02395 IPR003111 Lon, substrate-binding domain CF65_02395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02395 IPR008268 Peptidase S16, active site CF65_02395 IPR015947 PUA-like superfamily CF65_02395 IPR004815 Lon protease, bacterial/eukaryotic-type CF65_02395 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02397 IPR014284 RNA polymerase sigma-70 like domain CF65_02397 IPR013324 RNA polymerase sigma factor, region 3/4-like CF65_02397 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02397 IPR042189 Sigma-70 factor, region 1.1 superfamily CF65_02397 IPR007127 RNA polymerase sigma factor 70, region 1.1 CF65_02397 IPR007631 RNA polymerase sigma factor 70, non-essential domain CF65_02397 IPR007630 RNA polymerase sigma-70 region 4 CF65_02397 IPR007624 RNA polymerase sigma-70 region 3 CF65_02397 IPR000943 RNA polymerase sigma-70 CF65_02397 IPR009042 RNA polymerase sigma-70 region 1.2 CF65_02397 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CF65_02397 IPR013325 RNA polymerase sigma factor, region 2 CF65_02397 IPR028630 RNA polymerase sigma factor RpoD CF65_02397 IPR007627 RNA polymerase sigma-70 region 2 CF65_02398 IPR030846 DNA primase DnaG, bacteria CF65_02398 IPR034151 Bacterial DnaG primase, TOPRIM domain CF65_02398 IPR006171 TOPRIM domain CF65_02398 IPR013264 DNA primase, catalytic core, N-terminal CF65_02398 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CF65_02398 IPR019475 DNA primase, DnaB-helicase binding domain CF65_02398 IPR006295 DNA primase, DnaG CF65_02398 IPR013173 DNA primase DnaG, DnaB-binding domain CF65_02398 IPR036977 DNA Primase, CHC2-type zinc finger CF65_02398 IPR002694 Zinc finger, CHC2-type CF65_02398 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CF65_02399 IPR038380 Ribosomal protein S21 superfamily CF65_02399 IPR018278 Ribosomal protein S21, conserved site CF65_02399 IPR001911 Ribosomal protein S21 CF65_02402 IPR017860 Peptidase M22, conserved site CF65_02402 IPR017861 Kae1/TsaD family CF65_02402 IPR000905 Gcp-like domain CF65_02402 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CF65_02407 IPR020633 Thymidine kinase, conserved site CF65_02407 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02407 IPR001267 Thymidine kinase CF65_02409 IPR013840 NAD-dependent DNA ligase, N-terminal CF65_02409 IPR001679 NAD-dependent DNA ligase CF65_02409 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CF65_02409 IPR010994 RuvA domain 2-like CF65_02409 IPR004150 NAD-dependent DNA ligase, OB-fold CF65_02409 IPR013839 NAD-dependent DNA ligase, adenylation CF65_02409 IPR001357 BRCT domain CF65_02409 IPR036420 BRCT domain superfamily CF65_02409 IPR041663 DisA/LigA, helix-hairpin-helix motif CF65_02409 IPR012340 Nucleic acid-binding, OB-fold CF65_02409 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CF65_02409 IPR033136 NAD-dependent DNA ligase, conserved site CF65_02409 IPR018239 NAD-dependent DNA ligase, active site CF65_02410 IPR011919 Cell division protein ZipA CF65_02410 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily CF65_02410 IPR007449 ZipA, C-terminal FtsZ-binding domain CF65_02411 IPR022985 Sulfate transporter CysZ CF65_02412 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_02412 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CF65_02412 IPR005856 Cysteine synthase CF65_02412 IPR001926 Pyridoxal-phosphate dependent enzyme CF65_02412 IPR005859 Cysteine synthase CysK CF65_02416 IPR036895 Uracil-DNA glycosylase-like domain superfamily CF65_02416 IPR005122 Uracil-DNA glycosylase-like CF65_02417 IPR041706 YchF, N-terminal CF65_02417 IPR013029 YchF, C-terminal domain CF65_02417 IPR023192 TGS-like domain superfamily CF65_02417 IPR012676 TGS-like CF65_02417 IPR004095 TGS CF65_02417 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02417 IPR006073 GTP binding domain CF65_02417 IPR031167 OBG-type guanine nucleotide-binding (G) domain CF65_02417 IPR012675 Beta-grasp domain superfamily CF65_02417 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CF65_02418 IPR036416 Peptidyl-tRNA hydrolase superfamily CF65_02418 IPR018171 Peptidyl-tRNA hydrolase, conserved site CF65_02418 IPR001328 Peptidyl-tRNA hydrolase CF65_02420 IPR012337 Ribonuclease H-like superfamily CF65_02420 IPR025948 HTH-like domain CF65_02420 IPR038965 Transposase InsF-like CF65_02420 IPR001584 Integrase, catalytic core CF65_02420 IPR036397 Ribonuclease H superfamily CF65_02423 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase CF65_02423 IPR000715 Glycosyl transferase, family 4 CF65_02423 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CF65_02425 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_02425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_02425 IPR005814 Aminotransferase class-III CF65_02425 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CF65_02426 IPR002912 ACT domain CF65_02426 IPR006674 HD domain CF65_02426 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CF65_02426 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme CF65_02426 IPR003607 HD/PDEase domain CF65_02429 IPR000994 Peptidase M24 CF65_02429 IPR001714 Peptidase M24, methionine aminopeptidase CF65_02429 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CF65_02429 IPR036005 Creatinase/aminopeptidase-like CF65_02430 IPR000361 FeS cluster biogenesis CF65_02430 IPR016092 FeS cluster insertion protein CF65_02430 IPR017870 FeS cluster insertion, C-terminal, conserved site CF65_02430 IPR023063 FeS cluster insertion protein ErpA CF65_02430 IPR035903 HesB-like domain superfamily CF65_02432 IPR001264 Glycosyl transferase, family 51 CF65_02432 IPR001460 Penicillin-binding protein, transpeptidase CF65_02432 IPR036950 Penicillin binding protein transglycosylase domain CF65_02432 IPR011813 Penicillin-binding protein 1B CF65_02432 IPR023346 Lysozyme-like domain superfamily CF65_02432 IPR012338 Beta-lactamase/transpeptidase-like CF65_02432 IPR028166 Bifunctional transglycosylase second domain CF65_02434 IPR004923 Iron permease FTR1/Fip1/EfeU CF65_02436 IPR038482 Periplasmic metal-binding protein tp34-type superfamily CF65_02436 IPR018470 Periplasmic metal-binding protein Tp34-type CF65_02438 IPR025857 MacB-like periplasmic core domain CF65_02438 IPR003838 ABC transporter permease protein domain CF65_02440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02440 IPR025857 MacB-like periplasmic core domain CF65_02440 IPR017911 ABC transporter, macrolide export, ATP-binding domain CF65_02440 IPR017871 ABC transporter, conserved site CF65_02440 IPR003439 ABC transporter-like CF65_02440 IPR003838 ABC transporter permease protein domain CF65_02440 IPR003593 AAA+ ATPase domain CF65_02442 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CF65_02442 IPR023555 Thiol-disulphide oxidoreductase ResA CF65_02442 IPR036249 Thioredoxin-like superfamily CF65_02442 IPR017937 Thioredoxin, conserved site CF65_02442 IPR013766 Thioredoxin domain CF65_02446 IPR036412 HAD-like superfamily CF65_02446 IPR006439 HAD hydrolase, subfamily IA CF65_02446 IPR041492 Haloacid dehalogenase-like hydrolase CF65_02446 IPR023214 HAD superfamily CF65_02446 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CF65_02450 IPR012337 Ribonuclease H-like superfamily CF65_02450 IPR002559 Transposase, IS4-like CF65_02454 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_02454 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site CF65_02454 IPR001650 Helicase, C-terminal CF65_02454 IPR003593 AAA+ ATPase domain CF65_02454 IPR011545 DEAD/DEAH box helicase domain CF65_02454 IPR024590 RNA helicase HrpA, C-terminal CF65_02454 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02454 IPR010222 RNA helicase HrpA CF65_02454 IPR007502 Helicase-associated domain CF65_02454 IPR011709 Domain of unknown function DUF1605 CF65_02455 IPR006696 Protein of unknown function DUF423 CF65_02456 IPR007382 Uncharacterised protein family UPF0756, transmembrame CF65_02457 IPR036249 Thioredoxin-like superfamily CF65_02457 IPR002109 Glutaredoxin CF65_02457 IPR033658 Glutaredoxin, PICOT-like CF65_02457 IPR014434 Monothiol glutaredoxin CF65_02457 IPR004480 Monothiol glutaredoxin-related CF65_02458 IPR006665 OmpA-like domain CF65_02458 IPR036737 OmpA-like domain superfamily CF65_02458 IPR006664 Outer membrane protein, bacterial CF65_02458 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CF65_02458 IPR000498 Outer membrane protein OmpA-like, transmembrane domain CF65_02458 IPR002368 Outer membrane protein, OmpA CF65_02458 IPR006690 Outer membrane protein, OmpA-like, conserved site CF65_02459 IPR004113 FAD-linked oxidase, C-terminal CF65_02459 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02459 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02459 IPR016166 FAD-binding domain, PCMH-type CF65_02459 IPR036318 FAD-binding, type PCMH-like superfamily CF65_02459 IPR006094 FAD linked oxidase, N-terminal CF65_02459 IPR009051 Alpha-helical ferredoxin CF65_02459 IPR016164 FAD-linked oxidase-like, C-terminal CF65_02460 IPR029069 HotDog domain superfamily CF65_02460 IPR006683 Thioesterase domain CF65_02460 IPR003736 Phenylacetic acid degradation-related domain CF65_02461 IPR033659 Ferrochelatase, N-terminal CF65_02461 IPR033644 Ferrochelatase, C-terminal CF65_02461 IPR019772 Ferrochelatase, active site CF65_02461 IPR001015 Ferrochelatase CF65_02462 IPR018219 Thiol peroxidase conserved site CF65_02462 IPR036249 Thioredoxin-like superfamily CF65_02462 IPR002065 Thiol peroxidase Tpx CF65_02462 IPR013766 Thioredoxin domain CF65_02462 IPR013740 Redoxin CF65_02463 IPR006680 Amidohydrolase-related CF65_02463 IPR032466 Metal-dependent hydrolase CF65_02463 IPR011059 Metal-dependent hydrolase, composite domain superfamily CF65_02463 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CF65_02465 IPR037171 NagB/RpiA transferase-like CF65_02465 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CF65_02465 IPR004547 Glucosamine-6-phosphate isomerase CF65_02465 IPR018321 Glucosamine-6-phosphate isomerase, conserved site CF65_02466 IPR005264 N-acetylneuraminate lyase CF65_02466 IPR020625 Schiff base-forming aldolase, active site CF65_02466 IPR013785 Aldolase-type TIM barrel CF65_02466 IPR020624 Schiff base-forming aldolase, conserved site CF65_02466 IPR002220 DapA-like CF65_02468 IPR000281 Helix-turn-helix protein RpiR CF65_02468 IPR035472 RpiR-like, SIS domain CF65_02468 IPR001347 Sugar isomerase (SIS) CF65_02468 IPR009057 Homeobox-like domain superfamily CF65_02468 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02470 IPR000600 ROK family CF65_02470 IPR023945 N-acetylmannosamine kinase, bacterial CF65_02472 IPR013785 Aldolase-type TIM barrel CF65_02472 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase CF65_02472 IPR011060 Ribulose-phosphate binding barrel CF65_02473 IPR004682 TRAP transporter solute receptor, DctP family CF65_02473 IPR018389 TRAP transporter solute receptor DctP/TeaA CF65_02473 IPR038404 TRAP transporter solute receptor DctP superfamily CF65_02474 IPR004681 TRAP transporter large membrane protein DctM CF65_02474 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CF65_02474 IPR007387 TRAP transporter, small membrane protein DctQ CF65_02476 IPR015915 Kelch-type beta propeller CF65_02476 IPR006652 Kelch repeat type 1 CF65_02476 IPR019936 Mutatrotase, YjhT-like CF65_02477 IPR036878 Glucose permease domain IIB CF65_02477 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component CF65_02477 IPR013013 Phosphotransferase system, EIIC component, type 1 CF65_02477 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CF65_02477 IPR003352 Phosphotransferase system, EIIC CF65_02477 IPR001996 Phosphotransferase system, IIB component, type 1 CF65_02478 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component CF65_02478 IPR001996 Phosphotransferase system, IIB component, type 1 CF65_02478 IPR013013 Phosphotransferase system, EIIC component, type 1 CF65_02478 IPR003352 Phosphotransferase system, EIIC CF65_02478 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CF65_02478 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CF65_02478 IPR011055 Duplicated hybrid motif CF65_02478 IPR036878 Glucose permease domain IIB CF65_02479 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CF65_02479 IPR006665 OmpA-like domain CF65_02479 IPR006664 Outer membrane protein, bacterial CF65_02479 IPR000498 Outer membrane protein OmpA-like, transmembrane domain CF65_02479 IPR002368 Outer membrane protein, OmpA CF65_02479 IPR036737 OmpA-like domain superfamily CF65_02479 IPR006690 Outer membrane protein, OmpA-like, conserved site CF65_02480 IPR024759 UvrB, YAD/RRR-motif-containing domain CF65_02480 IPR041471 UvrB, interaction domain CF65_02480 IPR004807 UvrABC system, subunit B CF65_02480 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_02480 IPR006935 Helicase/UvrB, N-terminal CF65_02480 IPR001943 UVR domain CF65_02480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02480 IPR001650 Helicase, C-terminal CF65_02480 IPR036876 UVR domain superfamily CF65_02481 IPR011541 Nickel/cobalt transporter, high-affinity CF65_02482 IPR016537 Uncharacterised conserved protein UCP008159, CF65_02482 IPR010412 Protein of unknown function DUF1007 CF65_02484 IPR003593 AAA+ ATPase domain CF65_02484 IPR032781 ABC-transporter extension domain CF65_02484 IPR003439 ABC transporter-like CF65_02484 IPR017871 ABC transporter, conserved site CF65_02484 IPR022374 Energy-dependent translational throttle protein EttA CF65_02484 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02485 IPR008635 Coiled stalk of trimeric autotransporter adhesin CF65_02485 IPR008640 Head domain of trimeric autotransporter adhesin CF65_02485 IPR005594 YadA-like, C-terminal CF65_02485 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_02485 IPR008126 Outer membrane adhesion, Yersinia CF65_02486 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CF65_02486 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CF65_02486 IPR002288 DNA gyrase B subunit, C-terminal CF65_02486 IPR003594 Histidine kinase/HSP90-like ATPase CF65_02486 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_02486 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02486 IPR001241 DNA topoisomerase, type IIA CF65_02486 IPR006171 TOPRIM domain CF65_02486 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative CF65_02486 IPR018522 DNA topoisomerase, type IIA, conserved site CF65_02486 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CF65_02486 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02491 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CF65_02491 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative CF65_02491 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CF65_02491 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CF65_02491 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CF65_02491 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CF65_02491 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CF65_02492 IPR036249 Thioredoxin-like superfamily CF65_02492 IPR004045 Glutathione S-transferase, N-terminal CF65_02492 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CF65_02492 IPR004046 Glutathione S-transferase, C-terminal CF65_02492 IPR040079 Glutathione Transferase family CF65_02492 IPR010987 Glutathione S-transferase, C-terminal-like CF65_02493 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_02493 IPR006597 Sel1-like repeat CF65_02494 IPR025576 YwiC-like protein CF65_02495 IPR019897 RidA, conserved site CF65_02495 IPR035959 RutC-like superfamily CF65_02495 IPR006175 YjgF/YER057c/UK114 family CF65_02495 IPR035709 RutC family, YoaB-like CF65_02499 IPR001173 Glycosyltransferase 2-like CF65_02499 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02500 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CF65_02500 IPR022958 Uncharacterised protein family UPF0294 CF65_02500 IPR005135 Endonuclease/exonuclease/phosphatase CF65_02501 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily CF65_02501 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CF65_02501 IPR022754 DNA polymerase III, gamma subunit, domain III CF65_02501 IPR012763 DNA polymerase III, subunit gamma/ tau CF65_02501 IPR021029 DNA polymerase III, tau subunit, domain V CF65_02501 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02501 IPR003593 AAA+ ATPase domain CF65_02502 IPR000836 Phosphoribosyltransferase domain CF65_02502 IPR005764 Adenine phosphoribosyl transferase CF65_02502 IPR029057 Phosphoribosyltransferase-like CF65_02504 IPR004960 Bacterial lipid A biosynthesis acyltransferase CF65_02504 IPR011921 Lipid A biosynthesis myristoyltransferase CF65_02506 IPR002781 Transmembrane protein TauE-like CF65_02507 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase CF65_02507 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily CF65_02509 IPR035904 Chorismate synthase AroC superfamily CF65_02509 IPR020541 Chorismate synthase, conserved site CF65_02509 IPR000453 Chorismate synthase CF65_02511 IPR006686 Mechanosensitive ion channel MscS, conserved site CF65_02511 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CF65_02511 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CF65_02511 IPR024393 Mechanosensitive ion channel MscS, porin domain CF65_02511 IPR010920 LSM domain superfamily CF65_02511 IPR006685 Mechanosensitive ion channel MscS CF65_02511 IPR011066 Mechanosensitive ion channel MscS, C-terminal CF65_02511 IPR023408 Mechanosensitive ion channel MscS domain superfamily CF65_02512 IPR042099 AMP-dependent synthetase-like superfamily CF65_02512 IPR000873 AMP-dependent synthetase/ligase CF65_02512 IPR020845 AMP-binding, conserved site CF65_02512 IPR010192 2-succinylbenzoate--CoA ligase CF65_02513 IPR010985 Ribbon-helix-helix CF65_02513 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal CF65_02513 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily CF65_02513 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain CF65_02513 IPR005621 Negative modulator of initiation of replication SeqA CF65_02513 IPR013321 Arc-type ribbon-helix-helix CF65_02514 IPR000073 Alpha/beta hydrolase fold-1 CF65_02514 IPR029058 Alpha/Beta hydrolase fold CF65_02515 IPR008254 Flavodoxin/nitric oxide synthase CF65_02515 IPR001226 Flavodoxin, conserved site CF65_02515 IPR010086 Flavodoxin, long chain CF65_02515 IPR029039 Flavoprotein-like superfamily CF65_02516 IPR036390 Winged helix DNA-binding domain superfamily CF65_02516 IPR002481 Ferric-uptake regulator CF65_02516 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02519 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CF65_02519 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CF65_02519 IPR005743 DNA gyrase, subunit A CF65_02519 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CF65_02519 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CF65_02519 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CF65_02519 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CF65_02521 IPR007360 Invasion gene expression up-regulator, SirB CF65_02523 IPR036877 SUI1 domain superfamily CF65_02523 IPR001950 SUI1 domain CF65_02523 IPR005872 Archaeal/bacterial translation initiation factor SUI1 CF65_02524 IPR014732 Orotidine 5'-phosphate decarboxylase CF65_02524 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CF65_02524 IPR001754 Orotidine 5'-phosphate decarboxylase domain CF65_02524 IPR011060 Ribulose-phosphate binding barrel CF65_02524 IPR013785 Aldolase-type TIM barrel CF65_02525 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_02525 IPR019734 Tetratricopeptide repeat CF65_02525 IPR013026 Tetratricopeptide repeat-containing domain CF65_02525 IPR041166 LapB, rubredoxin metal binding domain CF65_02525 IPR030865 Lipopolysaccharide assembly protein B CF65_02526 IPR010445 Lipopolysaccharide assembly protein A domain CF65_02526 IPR032906 Lipopolysaccharide assembly protein A CF65_02527 IPR020816 Histone-like DNA-binding protein, conserved site CF65_02527 IPR000119 Histone-like DNA-binding protein CF65_02527 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CF65_02527 IPR005685 Integration host factor, beta subunit CF65_02528 IPR022967 RNA-binding domain, S1 CF65_02528 IPR000110 Ribosomal protein S1 CF65_02528 IPR003029 S1 domain CF65_02528 IPR012340 Nucleic acid-binding, OB-fold CF65_02529 IPR003136 Cytidylate kinase CF65_02529 IPR011994 Cytidylate kinase domain CF65_02529 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02531 IPR007488 Protein of unknown function DUF535 CF65_02532 IPR012910 TonB-dependent receptor, plug domain CF65_02532 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_02532 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_02533 IPR001431 Peptidase M16, zinc-binding site CF65_02533 IPR007863 Peptidase M16, C-terminal CF65_02533 IPR011765 Peptidase M16, N-terminal CF65_02533 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CF65_02534 IPR007863 Peptidase M16, C-terminal CF65_02534 IPR001431 Peptidase M16, zinc-binding site CF65_02534 IPR011765 Peptidase M16, N-terminal CF65_02534 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CF65_02536 IPR008407 Branched-chain amino acid transport, AzlD CF65_02538 IPR004471 Branched-chain amino acid transport, AzlC CF65_02538 IPR011606 Branched-chain amino acid transport, permease CF65_02539 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02539 IPR036390 Winged helix DNA-binding domain superfamily CF65_02539 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain CF65_02539 IPR000847 Transcription regulator HTH, LysR CF65_02539 IPR005119 LysR, substrate-binding CF65_02540 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CF65_02540 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CF65_02540 IPR006276 Cobalamin-independent methionine synthase CF65_02540 IPR038071 UROD/MetE-like superfamily CF65_02543 IPR041527 YhcG, N-terminal CF65_02543 IPR009362 YhcG PDDEXK nuclease domain CF65_02544 IPR038718 SNF2-like, N-terminal domain superfamily CF65_02544 IPR040766 RapA, N-terminal Tudor-like domain 2 CF65_02544 IPR040765 RapA, N-terminal Tudor like domain 1 CF65_02544 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_02544 IPR000330 SNF2-related, N-terminal domain CF65_02544 IPR023949 RNA polymerase-associated protein RapA CF65_02544 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02544 IPR022737 RNA polymerase recycling, bacterial, C-terminal CF65_02544 IPR001650 Helicase, C-terminal CF65_02547 IPR006214 Bax inhibitor 1-related CF65_02548 IPR025526 DsrC-like domain superfamily CF65_02548 IPR007453 Sulphur transfer protein DsrC/TusE CF65_02548 IPR042072 DsrC-like protein, C-terminal domain CF65_02549 IPR006127 Periplasmic solute binding protein, ZnuA-like CF65_02549 IPR006128 Adhesion lipoprotein CF65_02549 IPR006129 Adhesin B CF65_02550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02550 IPR017871 ABC transporter, conserved site CF65_02550 IPR003439 ABC transporter-like CF65_02550 IPR003593 AAA+ ATPase domain CF65_02551 IPR001626 ABC transporter, TroCD-like CF65_02551 IPR037294 ABC transporter, BtuC-like CF65_02552 IPR037294 ABC transporter, BtuC-like CF65_02552 IPR001626 ABC transporter, TroCD-like CF65_02553 IPR017968 Acylphosphatase, conserved site CF65_02553 IPR036046 Acylphosphatase-like domain superfamily CF65_02553 IPR001792 Acylphosphatase-like domain CF65_02553 IPR020456 Acylphosphatase CF65_02554 IPR018635 Uncharacterised protein family UPF0319 CF65_02556 IPR011607 Methylglyoxal synthase-like domain CF65_02556 IPR018148 Methylglyoxal synthase, active site CF65_02556 IPR004363 Methylglyoxal synthase CF65_02556 IPR036914 Methylglyoxal synthase-like domain superfamily CF65_02558 IPR005185 Inner membrane component domain CF65_02558 IPR031308 Uncharacterised conserved protein UCP028777 CF65_02560 IPR032692 Integral membrane protein YccS, N-terminal CF65_02560 IPR010020 Integral membrane protein, YccS/YhfK CF65_02560 IPR010019 Integral membrane protein, YccS CF65_02561 IPR002625 Smr domain CF65_02561 IPR022990 Uncharacterised protein family UPF0115 CF65_02561 IPR036063 Smr domain superfamily CF65_02562 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_02562 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase CF65_02562 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02562 IPR007848 Methyltransferase small domain CF65_02562 IPR004556 Methyltransferase HemK-like CF65_02563 IPR029061 Thiamin diphosphate-binding fold CF65_02563 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CF65_02563 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02563 IPR033248 Transketolase, C-terminal domain CF65_02565 IPR005474 Transketolase, N-terminal CF65_02565 IPR029061 Thiamin diphosphate-binding fold CF65_02565 IPR033247 Transketolase family CF65_02565 IPR033248 Transketolase, C-terminal domain CF65_02565 IPR020826 Transketolase binding site CF65_02565 IPR005478 Transketolase, bacterial-like CF65_02565 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02565 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CF65_02574 IPR023023 dNTP triphosphohydrolase, type 2 CF65_02574 IPR006261 dNTP triphosphohydrolase CF65_02574 IPR003607 HD/PDEase domain CF65_02574 IPR006674 HD domain CF65_02574 IPR026875 Phosphohydrolase-associated domain CF65_02575 IPR005261 Conserved hypothetical protein CHP00659 CF65_02575 IPR007300 CidB/LrgB family CF65_02576 IPR005538 LrgA/CidA family CF65_02576 IPR022957 Uncharacterised protein family UPF0299 CF65_02577 IPR002071 Thermonuclease active site CF65_02577 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CF65_02577 IPR035437 SNase-like, OB-fold superfamily CF65_02579 IPR000192 Aminotransferase class V domain CF65_02579 IPR016454 Cysteine desulfurase CF65_02579 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02579 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_02579 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_02581 IPR003808 Fe-S metabolism associated domain, SufE-like CF65_02584 IPR011913 RfaE bifunctional protein, domain I CF65_02584 IPR023030 Bifunctional protein HldE CF65_02584 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02584 IPR011611 Carbohydrate kinase PfkB CF65_02584 IPR004821 Cytidyltransferase-like domain CF65_02584 IPR029056 Ribokinase-like CF65_02584 IPR011914 RfaE bifunctional protein, domain II CF65_02586 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CF65_02586 IPR004960 Bacterial lipid A biosynthesis acyltransferase CF65_02587 IPR036411 TorD-like superfamily CF65_02587 IPR026269 Tat proofreading chaperone DmsD-type CF65_02589 IPR029039 Flavoprotein-like superfamily CF65_02589 IPR003680 Flavodoxin-like fold CF65_02591 IPR001972 Stomatin family CF65_02591 IPR001107 Band 7 domain CF65_02591 IPR036013 Band 7/SPFH domain superfamily CF65_02591 IPR018080 Band 7/stomatin-like, conserved site CF65_02591 IPR032435 Band 7, C-terminal extension CF65_02593 IPR035923 TT1751-like domain superfamily CF65_02593 IPR005180 Domain of unknown function DUF302 CF65_02593 IPR003691 Putative fluoride ion transporter CrcB CF65_02595 IPR009056 Cytochrome c-like domain CF65_02595 IPR036909 Cytochrome c-like domain superfamily CF65_02595 IPR025992 Haem-binding domain CF65_02595 IPR004852 Di-haem cytochrome c peroxidase CF65_02597 IPR010997 HRDC-like superfamily CF65_02597 IPR002121 HRDC domain CF65_02597 IPR006292 Ribonuclease D CF65_02597 IPR012337 Ribonuclease H-like superfamily CF65_02597 IPR036397 Ribonuclease H superfamily CF65_02597 IPR002562 3'-5' exonuclease domain CF65_02598 IPR000873 AMP-dependent synthetase/ligase CF65_02598 IPR020845 AMP-binding, conserved site CF65_02598 IPR025110 AMP-binding enzyme, C-terminal domain CF65_02598 IPR042099 AMP-dependent synthetase-like superfamily CF65_02599 IPR004658 Outer membrane lipoprotein Slp CF65_02600 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB CF65_02600 IPR000905 Gcp-like domain CF65_02601 IPR010614 DEAD2 CF65_02601 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_02601 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CF65_02601 IPR006555 ATP-dependent helicase, C-terminal CF65_02601 IPR001650 Helicase, C-terminal CF65_02601 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02602 IPR014718 Glycoside hydrolase-type carbohydrate-binding CF65_02602 IPR011013 Galactose mutarotase-like domain superfamily CF65_02602 IPR025532 Glucose-6-phosphate 1-epimerase CF65_02602 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CF65_02603 IPR011990 Tetratricopeptide-like helical domain superfamily CF65_02604 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CF65_02604 IPR023753 FAD/NAD(P)-binding domain CF65_02604 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_02604 IPR005982 Thioredoxin reductase CF65_02606 IPR003439 ABC transporter-like CF65_02606 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02606 IPR017871 ABC transporter, conserved site CF65_02606 IPR036640 ABC transporter type 1, transmembrane domain superfamily CF65_02606 IPR003593 AAA+ ATPase domain CF65_02606 IPR039421 Type I protein exporter CF65_02606 IPR011527 ABC transporter type 1, transmembrane domain CF65_02606 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD CF65_02609 IPR011527 ABC transporter type 1, transmembrane domain CF65_02609 IPR036640 ABC transporter type 1, transmembrane domain superfamily CF65_02609 IPR003593 AAA+ ATPase domain CF65_02609 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02609 IPR017871 ABC transporter, conserved site CF65_02609 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CF65_02609 IPR003439 ABC transporter-like CF65_02610 IPR029069 HotDog domain superfamily CF65_02610 IPR025652 Acyl-CoA thioesterase II domain CF65_02610 IPR003703 Acyl-CoA thioesterase CF65_02610 IPR042171 Acyl-CoA thioesterase, double hotdog domain CF65_02613 IPR011009 Protein kinase-like domain superfamily CF65_02615 IPR010835 Protein of unknown function DUF1439 CF65_02616 IPR000600 ROK family CF65_02616 IPR023505 N-acetyl-D-glucosamine kinase CF65_02618 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CF65_02618 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CF65_02619 IPR000926 GTP cyclohydrolase II, RibA CF65_02619 IPR036144 RibA-like superfamily CF65_02619 IPR032677 GTP cyclohydrolase II CF65_02623 IPR036291 NAD(P)-binding domain superfamily CF65_02623 IPR005888 dTDP-glucose 4,6-dehydratase CF65_02623 IPR016040 NAD(P)-binding domain CF65_02626 IPR006506 Conserved hypothetical protein CHP01619 CF65_02626 IPR016097 Domain of unknown function DUF695 CF65_02626 IPR009671 Regulator of ribonuclease activity B domain CF65_02626 IPR036701 RraB-like superfamily CF65_02628 IPR020847 AP endonuclease 1, binding site CF65_02628 IPR020848 AP endonuclease 1, conserved site CF65_02628 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CF65_02628 IPR037493 Exodeoxyribonuclease III-like CF65_02628 IPR005135 Endonuclease/exonuclease/phosphatase CF65_02628 IPR004808 AP endonuclease 1 CF65_02631 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CF65_02631 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP CF65_02631 IPR003362 Bacterial sugar transferase CF65_02632 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02632 IPR001173 Glycosyltransferase 2-like CF65_02634 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02634 IPR001173 Glycosyltransferase 2-like CF65_02636 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02636 IPR001173 Glycosyltransferase 2-like CF65_02636 IPR039528 DPM1-like CF65_02640 IPR001173 Glycosyltransferase 2-like CF65_02640 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02642 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02642 IPR017871 ABC transporter, conserved site CF65_02642 IPR003439 ABC transporter-like CF65_02642 IPR003593 AAA+ ATPase domain CF65_02643 IPR013525 ABC-2 type transporter CF65_02643 IPR000412 ABC-2 transporter CF65_02644 IPR011051 RmlC-like cupin domain superfamily CF65_02644 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related CF65_02644 IPR014710 RmlC-like jelly roll fold CF65_02645 IPR029903 RmlD-like substrate binding domain CF65_02645 IPR036291 NAD(P)-binding domain superfamily CF65_02645 IPR005913 dTDP-4-dehydrorhamnose reductase family CF65_02646 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CF65_02646 IPR005835 Nucleotidyl transferase domain CF65_02646 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02647 IPR005888 dTDP-glucose 4,6-dehydratase CF65_02647 IPR016040 NAD(P)-binding domain CF65_02647 IPR036291 NAD(P)-binding domain superfamily CF65_02648 IPR011757 Lytic transglycosylase MltB CF65_02648 IPR031304 Transglycosylase SLT domain 2 CF65_02648 IPR023346 Lysozyme-like domain superfamily CF65_02649 IPR001173 Glycosyltransferase 2-like CF65_02649 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02651 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02651 IPR001173 Glycosyltransferase 2-like CF65_02654 IPR002654 Glycosyl transferase, family 25 CF65_02656 IPR007345 Polysaccharide pyruvyl transferase CF65_02657 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CF65_02657 IPR036165 YefM-like superfamily CF65_02658 IPR009614 Toxin YoeB CF65_02658 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_02659 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02659 IPR003848 Domain of unknown function DUF218 CF65_02663 IPR012310 DNA ligase, ATP-dependent, central CF65_02663 IPR029319 DNA ligase, OB-like domain CF65_02663 IPR012340 Nucleic acid-binding, OB-fold CF65_02663 IPR016059 DNA ligase, ATP-dependent, conserved site CF65_02666 IPR005753 DNA helicase, ATP-dependent, UvrD type CF65_02666 IPR034739 UvrD/AddA helicase, N-terminal CF65_02666 IPR014017 UvrD-like DNA helicase, C-terminal CF65_02666 IPR014016 UvrD-like helicase, ATP-binding domain CF65_02666 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02666 IPR000212 DNA helicase, UvrD/REP type CF65_02666 IPR013986 DExx box DNA helicase domain superfamily CF65_02668 IPR003474 Gluconate transporter CF65_02671 IPR031322 Shikimate kinase/gluconokinase CF65_02671 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02671 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CF65_02673 IPR028082 Periplasmic binding protein-like I CF65_02673 IPR001761 Periplasmic binding protein/LacI sugar binding domain CF65_02673 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CF65_02673 IPR000843 LacI-type HTH domain CF65_02674 IPR003786 Sulfur carrier protein FdhD CF65_02674 IPR016193 Cytidine deaminase-like CF65_02675 IPR006657 Molybdopterin dinucleotide-binding domain CF65_02675 IPR006656 Molybdopterin oxidoreductase CF65_02675 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CF65_02675 IPR009010 Aspartate decarboxylase-like domain superfamily CF65_02675 IPR006311 Twin-arginine translocation pathway, signal sequence CF65_02675 IPR006443 Formate dehydrogenase-N, alpha subunit CF65_02675 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CF65_02675 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CF65_02676 IPR006656 Molybdopterin oxidoreductase CF65_02676 IPR006657 Molybdopterin dinucleotide-binding domain CF65_02676 IPR006443 Formate dehydrogenase-N, alpha subunit CF65_02676 IPR009010 Aspartate decarboxylase-like domain superfamily CF65_02676 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CF65_02676 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CF65_02676 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CF65_02676 IPR006311 Twin-arginine translocation pathway, signal sequence CF65_02677 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02677 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria CF65_02677 IPR038384 Formate dehydrogenase, C-terminal domain superfamily CF65_02677 IPR014603 Formate dehydrogenase iron-sulphur subunit CF65_02677 IPR015246 Formate dehydrogenase, transmembrane CF65_02677 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02678 IPR016174 Di-haem cytochrome, transmembrane CF65_02678 IPR006471 Formate dehydrogenase, gamma subunit CF65_02678 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CF65_02679 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CF65_02679 IPR006471 Formate dehydrogenase, gamma subunit CF65_02679 IPR016174 Di-haem cytochrome, transmembrane CF65_02682 IPR006070 YrdC-like domain CF65_02682 IPR004421 Carbamoyltransferase, HypF-type CF65_02682 IPR017968 Acylphosphatase, conserved site CF65_02682 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CF65_02682 IPR001792 Acylphosphatase-like domain CF65_02682 IPR036046 Acylphosphatase-like domain superfamily CF65_02682 IPR041440 HypF, Kae1-like domain CF65_02682 IPR011125 Zinc finger, HypF-type CF65_02683 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02683 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02684 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CF65_02684 IPR003918 NADH:ubiquinone oxidoreductase CF65_02686 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CF65_02686 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CF65_02687 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CF65_02687 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CF65_02688 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CF65_02688 IPR038730 Hydrogenase-4 component E-like CF65_02689 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CF65_02689 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CF65_02692 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CF65_02692 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CF65_02692 IPR029014 [NiFe]-hydrogenase, large subunit CF65_02692 IPR001501 Nickel-dependent hydrogenase, large subunit CF65_02692 IPR001135 NADH-quinone oxidoreductase, subunit D CF65_02692 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CF65_02692 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CF65_02693 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02693 IPR010226 NADH-quinone oxidoreductase, chain I CF65_02693 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02695 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CF65_02695 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CF65_02696 IPR010005 Formate hydrogenlyase maturation HycH CF65_02697 IPR023430 Peptidase HybD-like domain superfamily CF65_02697 IPR004420 Peptidase A31, hydrogenase maturation protease HycI CF65_02697 IPR000671 Peptidase A31 family CF65_02698 IPR006657 Molybdopterin dinucleotide-binding domain CF65_02698 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CF65_02698 IPR006656 Molybdopterin oxidoreductase CF65_02698 IPR006478 Formate dehydrogenase, alpha subunit CF65_02698 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CF65_02698 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain CF65_02698 IPR009010 Aspartate decarboxylase-like domain superfamily CF65_02698 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CF65_02698 IPR041924 Formate dehydrogenase H, N-terminal CF65_02699 IPR009010 Aspartate decarboxylase-like domain superfamily CF65_02699 IPR006657 Molybdopterin dinucleotide-binding domain CF65_02699 IPR041924 Formate dehydrogenase H, N-terminal CF65_02699 IPR006478 Formate dehydrogenase, alpha subunit CF65_02699 IPR006656 Molybdopterin oxidoreductase CF65_02699 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CF65_02699 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CF65_02699 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CF65_02699 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain CF65_02700 IPR016102 Succinyl-CoA synthetase-like CF65_02700 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CF65_02700 IPR036291 NAD(P)-binding domain superfamily CF65_02700 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CF65_02700 IPR005810 Succinyl-CoA ligase, alpha subunit CF65_02700 IPR003781 CoA-binding CF65_02700 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CF65_02702 IPR016102 Succinyl-CoA synthetase-like CF65_02702 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CF65_02702 IPR005809 Succinate--CoA synthetase, beta subunit CF65_02702 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CF65_02702 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CF65_02702 IPR013815 ATP-grasp fold, subdomain 1 CF65_02704 IPR011053 Single hybrid motif CF65_02704 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CF65_02704 IPR000089 Biotin/lipoyl attachment CF65_02704 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CF65_02704 IPR036625 E3-binding domain superfamily CF65_02704 IPR004167 Peripheral subunit-binding domain CF65_02704 IPR006255 Dihydrolipoamide succinyltransferase CF65_02704 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CF65_02706 IPR001017 Dehydrogenase, E1 component CF65_02706 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal CF65_02706 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain CF65_02706 IPR011603 2-oxoglutarate dehydrogenase E1 component CF65_02706 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02706 IPR029061 Thiamin diphosphate-binding fold CF65_02706 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily CF65_02708 IPR001279 Metallo-beta-lactamase CF65_02708 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CF65_02710 IPR010275 Protein of unknown function DUF882 CF65_02710 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily CF65_02710 IPR006311 Twin-arginine translocation pathway, signal sequence CF65_02711 IPR005490 L,D-transpeptidase catalytic domain CF65_02711 IPR038063 L,D-transpeptidase catalytic domain-like CF65_02712 IPR020992 Tail specific protease, C-terminal CF65_02712 IPR040573 Tail specific protease, N-terminal domain CF65_02712 IPR036034 PDZ superfamily CF65_02712 IPR001478 PDZ domain CF65_02712 IPR029045 ClpP/crotonase-like domain superfamily CF65_02712 IPR004447 C-terminal-processing peptidase S41A CF65_02712 IPR005151 Tail specific protease CF65_02713 IPR036442 ProQ/FinO domain superfamily CF65_02713 IPR035236 RNA chaperone ProQ, C-terminal CF65_02713 IPR023529 RNA chaperone ProQ CF65_02713 IPR016103 ProQ/FinO domain CF65_02714 IPR007498 Intermembrane transport protein PqiA-like CF65_02714 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type CF65_02715 IPR003399 Mce/MlaD CF65_02716 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CF65_02716 IPR036264 Bacterial exopeptidase dimerisation domain CF65_02716 IPR010161 Peptidase M20B, tripeptide aminopeptidase CF65_02716 IPR011650 Peptidase M20, dimerisation domain CF65_02716 IPR002933 Peptidase M20 CF65_02718 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CF65_02718 IPR003439 ABC transporter-like CF65_02718 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CF65_02718 IPR003593 AAA+ ATPase domain CF65_02718 IPR008995 Molybdate/tungstate binding, C-terminal CF65_02718 IPR017871 ABC transporter, conserved site CF65_02718 IPR013611 Transport-associated OB, type 2 CF65_02718 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02719 IPR035906 MetI-like superfamily CF65_02719 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_02720 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_02720 IPR035906 MetI-like superfamily CF65_02721 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CF65_02721 IPR006059 Bacterial extracellular solute-binding protein CF65_02722 IPR016193 Cytidine deaminase-like CF65_02722 IPR006263 Cytidine deaminase, homodimeric CF65_02722 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain CF65_02722 IPR002125 Cytidine and deoxycytidylate deaminase domain CF65_02722 IPR016192 APOBEC/CMP deaminase, zinc-binding CF65_02722 IPR020797 Cytidine deaminase, bacteria CF65_02724 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CF65_02724 IPR033729 Serine-tRNA ligase catalytic core domain CF65_02724 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CF65_02724 IPR015866 Serine-tRNA synthetase, type1, N-terminal CF65_02724 IPR002317 Serine-tRNA ligase, type1 CF65_02724 IPR006195 Aminoacyl-tRNA synthetase, class II CF65_02724 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CF65_02726 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CF65_02728 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02728 IPR003959 ATPase, AAA-type, core CF65_02728 IPR032423 AAA C-terminal domain CF65_02728 IPR021886 MgsA AAA+ ATPase C-terminal CF65_02728 IPR003593 AAA+ ATPase domain CF65_02728 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CF65_02731 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CF65_02731 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CF65_02731 IPR029046 Lipoprotein localisation LolA/LolB/LppX CF65_02733 IPR025199 DNA translocase FtsK, 4TM region CF65_02733 IPR041027 FtsK alpha domain CF65_02733 IPR002543 FtsK domain CF65_02733 IPR018541 FtsK gamma domain CF65_02733 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02733 IPR036390 Winged helix DNA-binding domain superfamily CF65_02733 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02734 IPR000485 AsnC-type HTH domain CF65_02734 IPR011008 Dimeric alpha-beta barrel CF65_02734 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02734 IPR036390 Winged helix DNA-binding domain superfamily CF65_02734 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CF65_02734 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CF65_02734 IPR011991 ArsR-like helix-turn-helix domain CF65_02734 IPR019888 Transcription regulator AsnC-type CF65_02735 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02735 IPR041166 LapB, rubredoxin metal binding domain CF65_02735 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02735 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CF65_02735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02735 IPR004504 DNA repair protein RadA CF65_02735 IPR003593 AAA+ ATPase domain CF65_02736 IPR039013 Inorganic triphosphatase YgiF CF65_02736 IPR033469 CYTH-like domain superfamily CF65_02736 IPR023577 CYTH domain CF65_02737 IPR018445 Putative phosphate transport regulator CF65_02737 IPR038078 PhoU-like domain superfamily CF65_02737 IPR002727 Protein of unknown function DUF47 CF65_02738 IPR001204 Phosphate transporter CF65_02740 IPR003646 SH3-like domain, bacterial-type CF65_02740 IPR016476 SH3 domain protein CF65_02742 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CF65_02742 IPR012006 tRNA nucleotidyltransferase, proteobacteria CF65_02742 IPR003607 HD/PDEase domain CF65_02742 IPR006674 HD domain CF65_02742 IPR002646 Poly A polymerase, head domain CF65_02743 IPR004565 Outer membrane lipoprotein LolB CF65_02743 IPR029046 Lipoprotein localisation LolA/LolB/LppX CF65_02745 IPR013750 GHMP kinase, C-terminal domain CF65_02745 IPR036554 GHMP kinase, C-terminal domain superfamily CF65_02745 IPR006204 GHMP kinase N-terminal domain CF65_02745 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CF65_02745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02745 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02747 IPR029057 Phosphoribosyltransferase-like CF65_02747 IPR005946 Ribose-phosphate pyrophosphokinase CF65_02747 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CF65_02747 IPR000836 Phosphoribosyltransferase domain CF65_02747 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CF65_02747 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CF65_02749 IPR000262 FMN-dependent dehydrogenase CF65_02749 IPR037396 FMN hydroxy acid dehydrogenase domain CF65_02749 IPR013785 Aldolase-type TIM barrel CF65_02749 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CF65_02749 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CF65_02749 IPR020920 L-lactate dehydrogenase, bacterial CF65_02751 IPR003804 L-lactate permease CF65_02754 IPR007458 Protein of unknown function DUF496 CF65_02756 IPR000192 Aminotransferase class V domain CF65_02756 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_02756 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_02756 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02756 IPR022278 Phosphoserine aminotransferase CF65_02756 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CF65_02757 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CF65_02757 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02757 IPR005861 Histidinol-phosphate aminotransferase family CF65_02757 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_02757 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_02757 IPR004839 Aminotransferase, class I/classII CF65_02758 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CF65_02758 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CF65_02758 IPR001986 Enolpyruvate transferase domain CF65_02758 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CF65_02758 IPR036968 Enolpyruvate transferase domain superfamily CF65_02762 IPR036397 Ribonuclease H superfamily CF65_02762 IPR002156 Ribonuclease H domain CF65_02762 IPR012337 Ribonuclease H-like superfamily CF65_02762 IPR022892 Ribonuclease HI CF65_02763 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_02763 IPR012337 Ribonuclease H-like superfamily CF65_02763 IPR006309 DNA polymerase 3, epsilon subunit CF65_02763 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CF65_02763 IPR036397 Ribonuclease H superfamily CF65_02775 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CF65_02775 IPR042118 QueA, domain 1 CF65_02775 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CF65_02775 IPR042119 QueA, domain 2 CF65_02776 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02776 IPR005861 Histidinol-phosphate aminotransferase family CF65_02776 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_02776 IPR004839 Aminotransferase, class I/classII CF65_02776 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_02777 IPR002616 tRNA-guanine(15) transglycosylase-like CF65_02777 IPR036511 Queuine tRNA-ribosyltransferase-like CF65_02777 IPR004803 tRNA-guanine transglycosylase CF65_02779 IPR003849 Preprotein translocase YajC CF65_02780 IPR001036 Acriflavin resistance protein CF65_02780 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CF65_02780 IPR005791 Protein translocase subunit SecD CF65_02780 IPR027398 SecD export protein N-terminal TM domain CF65_02780 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CF65_02780 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CF65_02781 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CF65_02781 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CF65_02781 IPR005665 Protein-export membrane protein SecF, bacterial CF65_02781 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CF65_02782 IPR011276 TonB-dependent haem/haemoglobin receptor CF65_02782 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CF65_02782 IPR010916 TonB box, conserved site CF65_02782 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_02782 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_02782 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_02782 IPR012910 TonB-dependent receptor, plug domain CF65_02782 IPR039426 Vitamin B12 transporter BtuB-like CF65_02784 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase CF65_02784 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain CF65_02784 IPR015590 Aldehyde dehydrogenase domain CF65_02784 IPR016163 Aldehyde dehydrogenase, C-terminal CF65_02784 IPR016161 Aldehyde/histidinol dehydrogenase CF65_02784 IPR039697 Iron-type alcohol dehydrogenase-like CF65_02784 IPR016162 Aldehyde dehydrogenase, N-terminal CF65_02784 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CF65_02784 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CF65_02785 IPR001851 ABC transporter, permease CF65_02786 IPR015861 ABC transporter, ribose import, RbsA CF65_02786 IPR003593 AAA+ ATPase domain CF65_02786 IPR003439 ABC transporter-like CF65_02786 IPR017871 ABC transporter, conserved site CF65_02786 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02787 IPR025997 Periplasmic binding protein CF65_02787 IPR028082 Periplasmic binding protein-like I CF65_02788 IPR025997 Periplasmic binding protein CF65_02788 IPR028082 Periplasmic binding protein-like I CF65_02789 IPR000683 Oxidoreductase, N-terminal CF65_02789 IPR036291 NAD(P)-binding domain superfamily CF65_02789 IPR030827 Inositol 2-dehydrogenase CF65_02789 IPR004104 Oxidoreductase, C-terminal CF65_02790 IPR010061 Methylmalonate-semialdehyde dehydrogenase CF65_02790 IPR015590 Aldehyde dehydrogenase domain CF65_02790 IPR016162 Aldehyde dehydrogenase, N-terminal CF65_02790 IPR016160 Aldehyde dehydrogenase, cysteine active site CF65_02790 IPR016163 Aldehyde dehydrogenase, C-terminal CF65_02790 IPR016161 Aldehyde/histidinol dehydrogenase CF65_02792 IPR005267 Glycerol-3-phosphate transporter CF65_02792 IPR011701 Major facilitator superfamily CF65_02792 IPR036259 MFS transporter superfamily CF65_02792 IPR020846 Major facilitator superfamily domain CF65_02792 IPR000849 Sugar phosphate transporter CF65_02792 IPR021159 Glycerate/sugar phosphate transporter, conserved site CF65_02793 IPR022337 Inositol monophosphatase, SuhB CF65_02793 IPR020550 Inositol monophosphatase, conserved site CF65_02793 IPR000760 Inositol monophosphatase-like CF65_02793 IPR020583 Inositol monophosphatase, metal-binding site CF65_02793 IPR033942 Inositol monophosphatase CF65_02794 IPR024203 5-deoxy-glucuronate isomerase, IolB CF65_02794 IPR023770 5-deoxy-glucuronate isomerase, Bacilli CF65_02794 IPR021120 KduI/IolB isomerase CF65_02794 IPR014710 RmlC-like jelly roll fold CF65_02794 IPR011051 RmlC-like cupin domain superfamily CF65_02797 IPR029056 Ribokinase-like CF65_02797 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily CF65_02797 IPR011611 Carbohydrate kinase PfkB CF65_02797 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes CF65_02797 IPR030830 5-Dehydro-2-deoxygluconokinase CF65_02797 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CF65_02800 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CF65_02800 IPR029035 DHS-like NAD/FAD-binding domain superfamily CF65_02800 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase CF65_02800 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes CF65_02800 IPR029061 Thiamin diphosphate-binding fold CF65_02800 IPR012000 Thiamine pyrophosphate enzyme, central domain CF65_02800 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CF65_02800 IPR000399 TPP-binding enzyme, conserved site CF65_02801 IPR030823 IolE/MocC family CF65_02801 IPR023952 Inosose dehydratase CF65_02801 IPR013022 Xylose isomerase-like, TIM barrel domain CF65_02801 IPR036237 Xylose isomerase-like superfamily CF65_02802 IPR004104 Oxidoreductase, C-terminal CF65_02802 IPR030827 Inositol 2-dehydrogenase CF65_02802 IPR036291 NAD(P)-binding domain superfamily CF65_02802 IPR000683 Oxidoreductase, N-terminal CF65_02803 IPR010129 Type I secretion membrane fusion protein, HlyD family CF65_02803 IPR006144 Secretion protein HlyD, conserved site CF65_02805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02805 IPR039395 Peptidase C39-like A CF65_02805 IPR039421 Type I protein exporter CF65_02805 IPR010132 ATPase, type I secretion system, HlyB CF65_02805 IPR017871 ABC transporter, conserved site CF65_02805 IPR003439 ABC transporter-like CF65_02805 IPR036640 ABC transporter type 1, transmembrane domain superfamily CF65_02805 IPR005074 Peptidase C39, bacteriocin processing CF65_02805 IPR011527 ABC transporter type 1, transmembrane domain CF65_02805 IPR003593 AAA+ ATPase domain CF65_02806 IPR003995 RTX toxin determinant A CF65_02806 IPR018504 RTX N-terminal CF65_02806 IPR013550 RTX, C-terminal CF65_02806 IPR001343 RTX calcium-binding nonapeptide repeat CF65_02806 IPR018511 Hemolysin-type calcium-binding conserved site CF65_02806 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_02807 IPR003996 RTX toxin-activating protein C, bacteria CF65_02810 IPR001085 Serine hydroxymethyltransferase CF65_02810 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CF65_02810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_02810 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_02810 IPR039429 Serine hydroxymethyltransferase-like domain CF65_02810 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02818 IPR023543 rRNA small subunit methyltransferase C CF65_02818 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02818 IPR007848 Methyltransferase small domain CF65_02818 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_02818 IPR013675 Methyltransferase small, N-terminal CF65_02819 IPR004615 DNA polymerase III, psi subunit CF65_02819 IPR036654 DNA polymerase III, psi subunit superfamily CF65_02819 IPR018382 DNA polymerase III, psi subunit, subgroup CF65_02821 IPR006464 N-acetyltransferase RimI/Ard1 CF65_02821 IPR016181 Acyl-CoA N-acyltransferase CF65_02821 IPR000182 GNAT domain CF65_02823 IPR013986 DExx box DNA helicase domain superfamily CF65_02823 IPR006697 RecBCD enzyme subunit RecC CF65_02823 IPR041500 RecC, C-terminal CF65_02823 IPR011335 Restriction endonuclease type II-like CF65_02823 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02824 IPR020511 Uncharacterised protein family HI0941 CF65_02826 IPR016419 Prepilin peptidase-dependent protein B, predicted CF65_02827 IPR012902 Prokaryotic N-terminal methylation site CF65_02829 IPR006690 Outer membrane protein, OmpA-like, conserved site CF65_02829 IPR036737 OmpA-like domain superfamily CF65_02829 IPR006664 Outer membrane protein, bacterial CF65_02829 IPR006665 OmpA-like domain CF65_02829 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal CF65_02829 IPR039001 Peptidoglycan-associated lipoprotein CF65_02830 IPR036752 TolB, N-terminal domain superfamily CF65_02830 IPR011042 Six-bladed beta-propeller, TolB-like CF65_02830 IPR011659 WD40-like Beta Propeller CF65_02830 IPR014167 Tol-Pal system protein TolB CF65_02830 IPR007195 TolB, N-terminal CF65_02832 IPR014161 Tol-Pal system, TolA CF65_02834 IPR003400 Biopolymer transport protein ExbD/TolR CF65_02834 IPR014168 Tol-Pal system protein TolR CF65_02836 IPR014163 Tol-Pal system, TolQ CF65_02836 IPR002898 MotA/TolQ/ExbB proton channel CF65_02837 IPR006683 Thioesterase domain CF65_02837 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CF65_02837 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CF65_02837 IPR029069 HotDog domain superfamily CF65_02837 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase CF65_02840 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CF65_02841 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CF65_02842 IPR020493 Uncharacterised protein family HI0310 CF65_02844 IPR003593 AAA+ ATPase domain CF65_02844 IPR041445 RuvB, AAA lid domain CF65_02844 IPR004605 DNA helicase, Holliday junction RuvB-type CF65_02844 IPR008823 RuvB C-terminal winged helix domain CF65_02844 IPR008824 RuvB-like P-loop domain CF65_02844 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02844 IPR036390 Winged helix DNA-binding domain superfamily CF65_02844 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02845 IPR012340 Nucleic acid-binding, OB-fold CF65_02845 IPR000085 Bacterial DNA recombination protein RuvA CF65_02845 IPR010994 RuvA domain 2-like CF65_02845 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CF65_02845 IPR036267 RuvA, C-terminal domain superfamily CF65_02845 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CF65_02845 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CF65_02846 IPR002176 Crossover junction endodeoxyribonuclease RuvC CF65_02846 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CF65_02846 IPR012337 Ribonuclease H-like superfamily CF65_02846 IPR036397 Ribonuclease H superfamily CF65_02847 IPR016777 Uncharacterised conserved protein UCP020772 CF65_02848 IPR017856 Integrase-like, N-terminal CF65_02848 IPR002876 Transcriptional regulator TACO1-like CF65_02848 IPR029072 YebC-like CF65_02848 IPR026564 Transcriptional regulator TACO1-like, domain 3 CF65_02850 IPR000086 NUDIX hydrolase domain CF65_02850 IPR015797 NUDIX hydrolase-like domain superfamily CF65_02850 IPR003564 Dihydroneopterin triphosphate diphosphatase CF65_02850 IPR020084 NUDIX hydrolase, conserved site CF65_02856 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CF65_02856 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CF65_02856 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CF65_02856 IPR012340 Nucleic acid-binding, OB-fold CF65_02856 IPR006195 Aminoacyl-tRNA synthetase, class II CF65_02856 IPR029351 GAD domain CF65_02856 IPR004115 GAD-like domain superfamily CF65_02856 IPR004524 Aspartate-tRNA ligase, type 1 CF65_02857 IPR007269 Isoprenylcysteine carboxyl methyltransferase CF65_02858 IPR041698 Methyltransferase domain 25 CF65_02858 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02858 IPR005271 Carboxy-S-adenosyl-L-methionine synthase CF65_02864 IPR005267 Glycerol-3-phosphate transporter CF65_02864 IPR011701 Major facilitator superfamily CF65_02864 IPR020846 Major facilitator superfamily domain CF65_02864 IPR036259 MFS transporter superfamily CF65_02864 IPR021159 Glycerate/sugar phosphate transporter, conserved site CF65_02864 IPR000849 Sugar phosphate transporter CF65_02865 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_02865 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_02865 IPR039426 Vitamin B12 transporter BtuB-like CF65_02865 IPR012910 TonB-dependent receptor, plug domain CF65_02865 IPR010916 TonB box, conserved site CF65_02865 IPR011276 TonB-dependent haem/haemoglobin receptor CF65_02865 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CF65_02865 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_02866 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CF65_02866 IPR004361 Glyoxalase I CF65_02866 IPR018146 Glyoxalase I, conserved site CF65_02866 IPR037523 Vicinal oxygen chelate (VOC) domain CF65_02866 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CF65_02867 IPR036397 Ribonuclease H superfamily CF65_02867 IPR012337 Ribonuclease H-like superfamily CF65_02867 IPR005987 Ribonuclease T CF65_02867 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_02870 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CF65_02870 IPR032813 Putative Na+/H+ antiporter, N-terminal CF65_02873 IPR005839 Methylthiotransferase CF65_02873 IPR020612 Methylthiotransferase, conserved site CF65_02873 IPR006638 Elp3/MiaB/NifB CF65_02873 IPR013848 Methylthiotransferase, N-terminal CF65_02873 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CF65_02873 IPR007197 Radical SAM CF65_02873 IPR038135 Methylthiotransferase, N-terminal domain superfamily CF65_02873 IPR023404 Radical SAM, alpha/beta horseshoe CF65_02873 IPR002792 TRAM domain CF65_02875 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CF65_02875 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_02875 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CF65_02875 IPR002938 FAD-binding domain CF65_02878 IPR003828 Epoxyqueuosine reductase QueH CF65_02879 IPR008949 Isoprenoid synthase domain superfamily CF65_02879 IPR033749 Polyprenyl synthetase, conserved site CF65_02879 IPR000092 Polyprenyl synthetase CF65_02880 IPR018258 Ribosomal protein L21, conserved site CF65_02880 IPR036164 L21-like superfamily CF65_02880 IPR028909 Ribosomal protein L21-like CF65_02880 IPR001787 Ribosomal protein L21 CF65_02881 IPR001684 Ribosomal protein L27 CF65_02881 IPR018261 Ribosomal protein L27, conserved site CF65_02883 IPR000620 EamA domain CF65_02885 IPR000620 EamA domain CF65_02886 IPR006169 GTP1/OBG domain CF65_02886 IPR014100 GTP-binding protein Obg/CgtA CF65_02886 IPR006074 GTP1/OBG, conserved site CF65_02886 IPR036726 GTP1/OBG domain superfamily CF65_02886 IPR006073 GTP binding domain CF65_02886 IPR031167 OBG-type guanine nucleotide-binding (G) domain CF65_02886 IPR035101 GTP-binding protein, Obg-type CF65_02886 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02888 IPR020081 SsrA-binding protein, conserved site CF65_02888 IPR000037 SsrA-binding protein CF65_02888 IPR023620 Small protein B CF65_02891 IPR039424 Solute-binding protein family 5 CF65_02891 IPR023765 Solute-binding protein family 5, conserved site CF65_02891 IPR030678 Peptide/nickel binding protein, MppA-type CF65_02891 IPR000914 Solute-binding protein family 5 domain CF65_02892 IPR030678 Peptide/nickel binding protein, MppA-type CF65_02892 IPR039424 Solute-binding protein family 5 CF65_02892 IPR023765 Solute-binding protein family 5, conserved site CF65_02892 IPR000914 Solute-binding protein family 5 domain CF65_02893 IPR035906 MetI-like superfamily CF65_02893 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_02895 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_02895 IPR035906 MetI-like superfamily CF65_02897 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CF65_02897 IPR035906 MetI-like superfamily CF65_02897 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CF65_02898 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CF65_02898 IPR003593 AAA+ ATPase domain CF65_02898 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02898 IPR003439 ABC transporter-like CF65_02898 IPR017871 ABC transporter, conserved site CF65_02899 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CF65_02899 IPR017871 ABC transporter, conserved site CF65_02899 IPR003439 ABC transporter-like CF65_02899 IPR003593 AAA+ ATPase domain CF65_02899 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02902 IPR039420 Transcriptional regulatory protein WalR-like CF65_02902 IPR001789 Signal transduction response regulator, receiver domain CF65_02902 IPR016032 Signal transduction response regulator, C-terminal effector CF65_02902 IPR001867 OmpR/PhoB-type DNA-binding domain CF65_02902 IPR011006 CheY-like superfamily CF65_02902 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02903 IPR035977 Ribosomal protein L36 superfamily CF65_02903 IPR000473 Ribosomal protein L36 CF65_02904 IPR034704 L28p-like CF65_02904 IPR002150 Ribosomal protein L31 CF65_02904 IPR027493 Ribosomal protein L31 type B CF65_02904 IPR042105 Ribosomal protein L31 superfamily CF65_02905 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CF65_02905 IPR031100 LOG family CF65_02907 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CF65_02907 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CF65_02907 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CF65_02907 IPR022910 Thiol:disulphide interchange protein DsbD CF65_02907 IPR036249 Thioredoxin-like superfamily CF65_02907 IPR013766 Thioredoxin domain CF65_02907 IPR035671 DsbD gamma CF65_02907 IPR017937 Thioredoxin, conserved site CF65_02909 IPR032808 DoxX family CF65_02910 IPR003029 S1 domain CF65_02910 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CF65_02910 IPR022967 RNA-binding domain, S1 CF65_02910 IPR004659 Ribonuclease E/G CF65_02910 IPR028878 Ribonuclease E CF65_02910 IPR021968 Polyribonucleotide phosphorylase C-terminal CF65_02910 IPR012340 Nucleic acid-binding, OB-fold CF65_02913 IPR006225 Pseudouridine synthase, RluC/RluD CF65_02913 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CF65_02913 IPR006145 Pseudouridine synthase, RsuA/RluA CF65_02913 IPR020103 Pseudouridine synthase, catalytic domain superfamily CF65_02913 IPR002942 RNA-binding S4 domain CF65_02913 IPR036986 RNA-binding S4 domain superfamily CF65_02915 IPR005746 Thioredoxin CF65_02915 IPR013766 Thioredoxin domain CF65_02915 IPR017937 Thioredoxin, conserved site CF65_02915 IPR036249 Thioredoxin-like superfamily CF65_02916 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF65_02916 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CF65_02916 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CF65_02916 IPR036291 NAD(P)-binding domain superfamily CF65_02916 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CF65_02917 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_02917 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CF65_02917 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02917 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_02919 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02919 IPR004346 CagE, TrbE, VirB component of type IV transporter system CF65_02919 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CF65_02921 IPR036597 Fido-like domain superfamily CF65_02921 IPR003812 Fido domain CF65_02922 IPR016161 Aldehyde/histidinol dehydrogenase CF65_02922 IPR012134 Glutamate-5-semialdehyde dehydrogenase CF65_02922 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CF65_02922 IPR000965 GPR domain CF65_02922 IPR015590 Aldehyde dehydrogenase domain CF65_02922 IPR016162 Aldehyde dehydrogenase, N-terminal CF65_02922 IPR016163 Aldehyde dehydrogenase, C-terminal CF65_02925 IPR005115 Uncharacterised domain UPF0126 CF65_02930 IPR000146 Fructose-1,6-bisphosphatase class 1 CF65_02930 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal CF65_02930 IPR020548 Fructose-1,6-bisphosphatase, active site CF65_02930 IPR028343 Fructose-1,6-bisphosphatase CF65_02931 IPR005757 Murein peptide ligase CF65_02931 IPR036565 Mur-like, catalytic domain superfamily CF65_02931 IPR004101 Mur ligase, C-terminal CF65_02931 IPR036615 Mur ligase, C-terminal domain superfamily CF65_02931 IPR013221 Mur ligase, central CF65_02931 IPR000713 Mur ligase, N-terminal catalytic domain CF65_02932 IPR026044 Membrane-bound lytic murein transglycosylase A CF65_02932 IPR034654 MltA, 3D domain CF65_02932 IPR010611 3D domain CF65_02932 IPR005300 Lytic transglycosylase MltA, domain B CF65_02932 IPR036908 RlpA-like domain superfamily CF65_02933 IPR035985 Ubiquitin-activating enzyme CF65_02933 IPR000594 THIF-type NAD/FAD binding fold CF65_02935 IPR035520 High-affinity zinc uptake system protein ZnuA CF65_02935 IPR006127 Periplasmic solute binding protein, ZnuA-like CF65_02936 IPR005519 Acid phosphatase, class B-like CF65_02936 IPR006423 5-nucleotidase lipoprotein e(P4) CF65_02936 IPR023214 HAD superfamily CF65_02936 IPR036412 HAD-like superfamily CF65_02937 IPR036183 YajQ-like superfamily CF65_02937 IPR035570 UPF0234, N-terminal CF65_02937 IPR007551 Protein of unknown function DUF520 CF65_02937 IPR035571 UPF0234-like, C-terminal CF65_02939 IPR023190 Phosphoserine phosphatase, domain 2 CF65_02939 IPR036412 HAD-like superfamily CF65_02939 IPR023214 HAD superfamily CF65_02939 IPR041449 Phosphoserine phosphatase, N-terminal CF65_02940 IPR019305 Uncharacterised protein family Smp CF65_02944 IPR002583 Ribosomal protein S20 CF65_02944 IPR036510 Ribosomal protein S20 superfamily CF65_02946 IPR004268 Peptidoglycan biosynthesis protein MurJ CF65_02947 IPR015864 FAD synthetase CF65_02947 IPR004821 Cytidyltransferase-like domain CF65_02947 IPR002606 Riboflavin kinase, bacterial CF65_02947 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CF65_02947 IPR023468 Riboflavin kinase CF65_02947 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02947 IPR023465 Riboflavin kinase domain superfamily CF65_02950 IPR002301 Isoleucine-tRNA ligase CF65_02950 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02950 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CF65_02950 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain CF65_02950 IPR002300 Aminoacyl-tRNA synthetase, class Ia CF65_02950 IPR010663 Zinc finger, FPG/IleRS-type CF65_02950 IPR023585 Isoleucine-tRNA ligase, type 1 CF65_02950 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_02950 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CF65_02950 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CF65_02952 IPR001872 Peptidase A8, signal peptidase II CF65_02954 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CF65_02955 IPR005215 Trigger factor CF65_02955 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CF65_02955 IPR008880 Trigger factor, C-terminal CF65_02955 IPR008881 Trigger factor, ribosome-binding, bacterial CF65_02955 IPR036611 Trigger factor ribosome-binding domain superfamily CF65_02955 IPR027304 Trigger factor/SurA domain superfamily CF65_02955 IPR037041 Trigger factor, C-terminal domain superfamily CF65_02956 IPR002104 Integrase, catalytic domain CF65_02956 IPR010998 Integrase/recombinase, N-terminal CF65_02956 IPR011932 Tyrosine recombinase XerD CF65_02956 IPR023009 Tyrosine recombinase XerC/XerD CF65_02956 IPR013762 Integrase-like, catalytic domain superfamily CF65_02956 IPR011010 DNA breaking-rejoining enzyme, catalytic core CF65_02956 IPR004107 Integrase, SAM-like, N-terminal CF65_02958 IPR036259 MFS transporter superfamily CF65_02958 IPR024989 Major facilitator superfamily associated domain CF65_02958 IPR026032 Probable 3-phenylpropionic acid transporter CF65_02959 IPR000304 Pyrroline-5-carboxylate reductase CF65_02959 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CF65_02959 IPR036291 NAD(P)-binding domain superfamily CF65_02959 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CF65_02959 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CF65_02961 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CF65_02961 IPR000304 Pyrroline-5-carboxylate reductase CF65_02961 IPR036291 NAD(P)-binding domain superfamily CF65_02961 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CF65_02961 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CF65_02962 IPR007476 Putative exonuclease, RdgC CF65_02964 IPR007340 Opacity-associated protein A CF65_02964 IPR013731 Opacity-associated protein A, N-terminal CF65_02966 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CF65_02966 IPR007197 Radical SAM CF65_02966 IPR013785 Aldolase-type TIM barrel CF65_02966 IPR022462 Lysine-2,3-aminomutase-like CF65_02967 IPR012340 Nucleic acid-binding, OB-fold CF65_02967 IPR011768 Translation elongation factor P CF65_02967 IPR001059 Translation elongation factor P/YeiP, central CF65_02967 IPR013852 Translation elongation factor P/YeiP, conserved site CF65_02967 IPR014722 Ribosomal protein L2, domain 2 CF65_02967 IPR015365 Elongation factor P, C-terminal CF65_02967 IPR013185 Translation elongation factor, KOW-like CF65_02967 IPR020599 Translation elongation factor P/YeiP CF65_02967 IPR008991 Translation protein SH3-like domain superfamily CF65_02969 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_02969 IPR018176 Tryptophanase, conserved site CF65_02969 IPR013441 Tyrosine phenol-lyase CF65_02969 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_02969 IPR011166 Beta-eliminating lyase family CF65_02969 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CF65_02969 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02970 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CF65_02970 IPR018176 Tryptophanase, conserved site CF65_02970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_02970 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_02970 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02970 IPR013441 Tyrosine phenol-lyase CF65_02970 IPR011166 Beta-eliminating lyase family CF65_02972 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CF65_02972 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CF65_02972 IPR013441 Tyrosine phenol-lyase CF65_02972 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02972 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CF65_02972 IPR011166 Beta-eliminating lyase family CF65_02972 IPR018176 Tryptophanase, conserved site CF65_02973 IPR013061 Tryptophan/tryrosine permease, conserved site CF65_02973 IPR013059 Tryptophan/tyrosine transporter CF65_02973 IPR018227 Amino acid/polyamine transporter 2 CF65_02974 IPR039446 Transcriptional regulator DauR-like CF65_02974 IPR013559 YheO-like CF65_02974 IPR039445 Transcriptional regulator DauR-like, HTH domain CF65_02975 IPR019275 Protein of unknown function DUF2301 CF65_02976 IPR010138 UDP-2,3-diacylglucosamine hydrolase CF65_02976 IPR029052 Metallo-dependent phosphatase-like CF65_02976 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CF65_02977 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CF65_02977 IPR002123 Phospholipid/glycerol acyltransferase CF65_02978 IPR008972 Cupredoxin CF65_02978 IPR026589 Cell division protein FtsP CF65_02978 IPR006311 Twin-arginine translocation pathway, signal sequence CF65_02978 IPR011707 Multicopper oxidase, type 3 CF65_02980 IPR000620 EamA domain CF65_02982 IPR034457 Organic radical-activating enzymes CF65_02982 IPR040074 BssD/PflA/YjjW CF65_02982 IPR012838 Pyruvate formate-lyase 1 activating enzyme CF65_02982 IPR034465 Pyruvate formate-lyase activase CF65_02982 IPR013785 Aldolase-type TIM barrel CF65_02982 IPR012839 Organic radical enzyme activase CF65_02982 IPR001989 Radical-activating enzyme, conserved site CF65_02982 IPR007197 Radical SAM CF65_02983 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CF65_02983 IPR005949 Formate acetyltransferase CF65_02983 IPR004184 Pyruvate formate lyase domain CF65_02983 IPR001150 Glycine radical domain CF65_02984 IPR000292 Formate/nitrite transporter CF65_02984 IPR023271 Aquaporin-like CF65_02984 IPR024002 Formate/nitrite transporter, conserved site CF65_02984 IPR023999 Formate transporter FocA, putative CF65_02987 IPR001310 Histidine triad (HIT) protein CF65_02987 IPR019808 Histidine triad, conserved site CF65_02987 IPR011146 HIT-like domain CF65_02987 IPR036265 HIT-like superfamily CF65_02990 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CF65_02990 IPR017853 Glycoside hydrolase superfamily CF65_02990 IPR001764 Glycoside hydrolase, family 3, N-terminal CF65_02990 IPR022956 Beta-hexosaminidase, bacterial CF65_02992 IPR010280 (Uracil-5)-methyltransferase family CF65_02992 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02992 IPR030390 RNA methyltransferase TrmA, active site CF65_02992 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC CF65_02992 IPR030391 RNA methyltransferase TrmA, conserved site CF65_02993 IPR015912 Phosphofructokinase, conserved site CF65_02993 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic CF65_02993 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type CF65_02993 IPR022953 ATP-dependent 6-phosphofructokinase CF65_02993 IPR035966 Phosphofructokinase superfamily CF65_02993 IPR000023 Phosphofructokinase domain CF65_02996 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CF65_02996 IPR027469 Cation efflux transmembrane domain superfamily CF65_02996 IPR023783 Cation efflux pump FieF CF65_02996 IPR027470 Cation efflux protein, cytoplasmic domain CF65_02996 IPR002524 Cation efflux protein CF65_02999 IPR005583 Peroxide stress protein YaaA CF65_03000 IPR002043 Uracil-DNA glycosylase family 1 CF65_03000 IPR036895 Uracil-DNA glycosylase-like domain superfamily CF65_03000 IPR005122 Uracil-DNA glycosylase-like CF65_03000 IPR018085 Uracil-DNA glycosylase, active site CF65_03001 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CF65_03001 IPR001150 Glycine radical domain CF65_03001 IPR011140 Autonomous glycyl radical cofactor GrcA CF65_03003 IPR005225 Small GTP-binding protein domain CF65_03003 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_03003 IPR035654 Elongation factor 4, domain IV CF65_03003 IPR013842 GTP-binding protein LepA, C-terminal CF65_03003 IPR038363 LepA, C-terminal domain superfamily CF65_03003 IPR031157 Tr-type G domain, conserved site CF65_03003 IPR004161 Translation elongation factor EFTu-like, domain 2 CF65_03003 IPR000640 Elongation factor EFG, domain V-like CF65_03003 IPR035647 EF-G domain III/V-like CF65_03003 IPR006297 Elongation factor 4 CF65_03003 IPR000795 Transcription factor, GTP-binding domain CF65_03004 IPR019533 Peptidase S26 CF65_03004 IPR019756 Peptidase S26A, signal peptidase I, serine active site CF65_03004 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CF65_03004 IPR036286 LexA/Signal peptidase-like superfamily CF65_03004 IPR000223 Peptidase S26A, signal peptidase I CF65_03004 IPR019758 Peptidase S26A, signal peptidase I, conserved site CF65_03006 IPR014720 Double-stranded RNA-binding domain CF65_03006 IPR036389 Ribonuclease III, endonuclease domain superfamily CF65_03006 IPR000999 Ribonuclease III domain CF65_03006 IPR011907 Ribonuclease III CF65_03008 IPR005662 GTP-binding protein Era CF65_03008 IPR006073 GTP binding domain CF65_03008 IPR030388 Era-type guanine nucleotide-binding (G) domain CF65_03008 IPR005225 Small GTP-binding protein domain CF65_03008 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_03008 IPR009019 K homology domain superfamily, prokaryotic type CF65_03008 IPR015946 K homology domain-like, alpha/beta CF65_03008 IPR004044 K Homology domain, type 2 CF65_03010 IPR031168 TrmE-type guanine nucleotide-binding domain CF65_03010 IPR018948 GTP-binding protein TrmE, N-terminal CF65_03010 IPR006073 GTP binding domain CF65_03010 IPR004520 tRNA modification GTPase MnmE CF65_03010 IPR027368 tRNA modification GTPase MnmE domain 2 CF65_03010 IPR025867 MnmE, helical domain CF65_03010 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CF65_03010 IPR005225 Small GTP-binding protein domain CF65_03010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_03011 IPR019998 Membrane insertase YidC CF65_03011 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CF65_03011 IPR028053 Membrane insertase YidC, N-terminal CF65_03011 IPR038210 Membrane insertase YidC, periplasmic domain CF65_03011 IPR038221 YidC, periplasmic domain superfamily CF65_03011 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CF65_03013 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_03013 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_03013 IPR000100 Ribonuclease P CF65_03014 IPR000271 Ribosomal protein L34 CF65_03014 IPR020939 Ribosomal protein L34, conserved site