CF65_00002 IPR001001 DNA polymerase III, beta chain CF65_00002 IPR022634 DNA polymerase III, beta chain, N-terminal CF65_00002 IPR022635 DNA polymerase III, beta chain, C-terminal CF65_00002 IPR022637 DNA polymerase III, beta chain, central CF65_00003 IPR001238 DNA-binding, RecF CF65_00003 IPR003395 RecF/RecN/SMC, N-terminal CF65_00003 IPR018078 DNA-binding, RecF, conserved site CF65_00003 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00004 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00007 IPR001424 Superoxide dismutase, copper/zinc binding domain CF65_00007 IPR018152 Superoxide dismutase, copper/zinc, binding site CF65_00007 IPR036423 CF65_00007 CF65_00010 IPR001584 Integrase, catalytic core CF65_00010 IPR012337 Ribonuclease H-like domain CF65_00012 IPR001387 Cro/C1-type helix-turn-helix domain CF65_00012 IPR010982 Lambda repressor-like, DNA-binding domain CF65_00015 IPR001891 Malic oxidoreductase CF65_00015 IPR012301 Malic enzyme, N-terminal domain CF65_00015 IPR012302 Malic enzyme, NAD-binding CF65_00015 IPR015884 Malic enzyme, conserved site CF65_00015 IPR036291 CF65_00015 CF65_00015 IPR037062 CF65_00015 CF65_00019 IPR025382 Domain of unknown function DUF4297 CF65_00021 IPR013498 DNA topoisomerase, type IA, zn finger CF65_00021 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00021 IPR034739 CF65_00021 CF65_00022 IPR006597 Sel1-like CF65_00022 IPR011990 Tetratricopeptide-like helical domain CF65_00024 IPR001387 Cro/C1-type helix-turn-helix domain CF65_00024 IPR010982 Lambda repressor-like, DNA-binding domain CF65_00028 IPR006935 Helicase/UvrB domain CF65_00028 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00029 IPR001091 Restriction/modification DNA-methylase CF65_00029 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_00029 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CF65_00029 IPR002941 DNA methylase N-4/N-6 CF65_00029 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00033 IPR009492 TniQ CF65_00034 IPR008868 Bacterial TniB CF65_00034 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00036 IPR001584 Integrase, catalytic core CF65_00036 IPR009057 Homeodomain-like CF65_00036 IPR012337 Ribonuclease H-like domain CF65_00036 IPR015378 Transposase-like, Mu, C-terminal CF65_00036 IPR036397 CF65_00036 CF65_00037 IPR014832 TnsA endonuclease C-terminal CF65_00037 IPR014833 TnsA endonuclease, N-terminal CF65_00038 IPR036188 CF65_00038 CF65_00039 IPR005616 Cytochrome C biogenesis protein CcmH CF65_00039 IPR011990 Tetratricopeptide-like helical domain CF65_00039 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF CF65_00039 IPR019734 Tetratricopeptide repeat CF65_00039 IPR038297 CF65_00039 CF65_00040 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CF65_00040 IPR013740 Redoxin CF65_00040 IPR017937 Thioredoxin, conserved site CF65_00040 IPR036249 CF65_00040 CF65_00041 IPR002541 Cytochrome c assembly protein CF65_00041 IPR003567 Cytochrome c-type biogenesis protein CF65_00041 IPR003568 Cytochrome c-type biogenesis protein CcmF CF65_00041 IPR003570 Cytochrome c-type biogenesis protein NrfE CF65_00041 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE CF65_00041 IPR032523 CF65_00041 CF65_00043 IPR005614 NrfD family CF65_00043 IPR017566 NrfD CF65_00044 IPR017567 Cytochrome c nitrite reductase, Fe-S protein CF65_00044 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00044 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_00046 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit CF65_00046 IPR036280 CF65_00046 CF65_00047 IPR003321 Cytochrome c552 CF65_00047 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit CF65_00047 IPR036280 CF65_00047 CF65_00050 IPR011990 Tetratricopeptide-like helical domain CF65_00050 IPR017560 Cytochrome c-type biogenesis protein CcmI CF65_00052 IPR005616 Cytochrome C biogenesis protein CcmH CF65_00052 IPR038297 CF65_00052 CF65_00054 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CF65_00054 IPR013740 Redoxin CF65_00054 IPR017937 Thioredoxin, conserved site CF65_00054 IPR036249 CF65_00054 CF65_00055 IPR002541 Cytochrome c assembly protein CF65_00055 IPR003567 Cytochrome c-type biogenesis protein CF65_00055 IPR003568 Cytochrome c-type biogenesis protein CcmF CF65_00055 IPR032523 CF65_00055 CF65_00056 IPR004329 CcmE/CycJ protein CF65_00056 IPR036127 CF65_00056 CF65_00057 IPR007078 Haem exporter protein D (CcmD) CF65_00058 IPR002541 Cytochrome c assembly protein CF65_00058 IPR003557 Cytochrome c-type biogenesis protein CcmC CF65_00059 IPR003544 Cytochrome c-type biogenesis protein CcmB CF65_00059 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CF65_00061 IPR003439 ABC transporter-like CF65_00061 IPR003593 AAA+ ATPase domain CF65_00061 IPR005895 ABC transporter, haem export, CcmA CF65_00061 IPR017871 ABC transporter, conserved site CF65_00061 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00062 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CF65_00062 IPR011701 Major facilitator superfamily CF65_00062 IPR036259 CF65_00062 CF65_00064 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CF65_00064 IPR002942 RNA-binding S4 domain CF65_00064 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CF65_00064 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CF65_00064 IPR020103 Pseudouridine synthase, catalytic domain CF65_00064 IPR036986 CF65_00064 CF65_00066 IPR002505 Phosphate acetyl/butaryl transferase CF65_00066 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase CF65_00066 IPR012301 Malic enzyme, N-terminal domain CF65_00066 IPR012302 Malic enzyme, NAD-binding CF65_00066 IPR015884 Malic enzyme, conserved site CF65_00066 IPR036291 CF65_00066 CF65_00066 IPR037062 CF65_00066 CF65_00068 IPR001189 Manganese/iron superoxide dismutase CF65_00068 IPR019831 Manganese/iron superoxide dismutase, N-terminal CF65_00068 IPR019832 Manganese/iron superoxide dismutase, C-terminal CF65_00068 IPR019833 Manganese/iron superoxide dismutase, binding site CF65_00068 IPR036314 CF65_00068 CF65_00068 IPR036324 CF65_00068 CF65_00069 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CF65_00069 IPR014902 Lipoprotein GNA1870-related, C-terminal CF65_00071 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CF65_00072 IPR007055 BON domain CF65_00072 IPR018392 LysM domain CF65_00072 IPR036779 CF65_00072 CF65_00075 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CF65_00076 IPR006156 Dihydroneopterin aldolase CF65_00076 IPR006157 Dihydroneopterin aldolase/epimerase domain CF65_00077 IPR000189 Prokaryotic transglycosylase, active site CF65_00077 IPR001638 Extracellular solute-binding protein, family 3 CF65_00077 IPR008258 Lytic transglycosylase-like SLT domain CF65_00077 IPR023346 Lysozyme-like domain CF65_00077 IPR023703 Membrane-bound lytic murein transglycosylase F CF65_00079 IPR003752 Disulphide bond formation protein DsbB/BdbC CF65_00079 IPR022920 Disulphide bond formation protein DsbB CF65_00079 IPR023380 Disulphide bond formation protein DsbB-like domain CF65_00080 IPR004671 Na+/H+ antiporter NhaB CF65_00081 IPR000524 Transcription regulator HTH, GntR CF65_00081 IPR008920 Transcription regulator FadR/GntR, C-terminal CF65_00081 IPR014178 Fatty acid response transcription factor FadR CF65_00081 IPR028374 FadR, C-terminal domain CF65_00081 IPR036388 CF65_00081 CF65_00081 IPR036390 CF65_00081 CF65_00084 IPR004839 Aminotransferase, class I/classII CF65_00084 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_00084 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_00084 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00085 IPR004561 Isochorismate synthase CF65_00085 IPR005801 ADC synthase CF65_00085 IPR015890 Chorismate binding, C-terminal CF65_00085 IPR034681 CF65_00085 CF65_00086 IPR004433 Menaquinone biosynthesis protein MenD CF65_00086 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CF65_00086 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CF65_00086 IPR029061 Thiamin diphosphate-binding fold CF65_00086 IPR032264 CF65_00086 CF65_00087 IPR000073 Alpha/beta hydrolase fold-1 CF65_00087 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase CF65_00087 IPR029058 Alpha/Beta hydrolase fold CF65_00088 IPR000589 Ribosomal protein S15 CF65_00088 IPR005290 Ribosomal protein S15, bacterial-type CF65_00088 IPR009068 S15/NS1, RNA-binding CF65_00089 IPR002133 S-adenosylmethionine synthetase CF65_00089 IPR022628 S-adenosylmethionine synthetase, N-terminal CF65_00089 IPR022629 S-adenosylmethionine synthetase, central domain CF65_00089 IPR022630 S-adenosylmethionine synthetase, C-terminal CF65_00089 IPR022631 S-adenosylmethionine synthetase, conserved site CF65_00089 IPR022636 S-adenosylmethionine synthetase superfamily CF65_00091 IPR006640 Domain of unknown function SprT-like CF65_00091 IPR023483 Uncharacterised protein family SprT CF65_00091 IPR035240 CF65_00091 CF65_00092 IPR004694 Hydroxy amino acid transporter CF65_00092 IPR018227 Tryptophan/tyrosine permease CF65_00093 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CF65_00093 IPR005130 Serine dehydratase-like, alpha subunit CF65_00093 IPR005131 Serine dehydratase beta chain CF65_00093 IPR029009 Allosteric substrate binding domain CF65_00096 IPR004550 L-asparaginase, type II CF65_00096 IPR006034 Asparaginase/glutaminase CF65_00096 IPR020827 Asparaginase/glutaminase, active site 1 CF65_00096 IPR027473 L-asparaginase, C-terminal domain CF65_00096 IPR027474 L-asparaginase, N-terminal CF65_00096 IPR027475 Asparaginase/glutaminase, active site 2 CF65_00096 IPR036152 CF65_00096 CF65_00096 IPR037152 CF65_00096 CF65_00099 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CF65_00099 IPR007197 Radical SAM CF65_00099 IPR013785 Aldolase-type TIM barrel CF65_00099 IPR027492 Dual-specificity RNA methyltransferase RlmN CF65_00101 IPR011990 Tetratricopeptide-like helical domain CF65_00101 IPR013360 Pilus biogenesis/stability type IV, PilW CF65_00101 IPR019734 Tetratricopeptide repeat CF65_00105 IPR025194 Domain of unknown function DUF4115 CF65_00106 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CF65_00106 IPR011005 Dihydropteroate synthase-like CF65_00106 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CF65_00107 IPR004154 Anticodon-binding CF65_00107 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CF65_00107 IPR015807 Histidine-tRNA ligase CF65_00107 IPR036621 CF65_00107 CF65_00108 IPR011990 Tetratricopeptide-like helical domain CF65_00108 IPR018704 Domain of unknown function DUF09976 CF65_00108 IPR026039 Uncharacterised protein family UPF0070 CF65_00109 IPR007318 Phospholipid methyltransferase CF65_00110 IPR003593 AAA+ ATPase domain CF65_00110 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) CF65_00110 IPR017788 DnaA regulatory inactivator Hda CF65_00110 IPR020591 Chromosomal replication control, initiator DnaA-like CF65_00110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00112 IPR006042 Xanthine/uracil permease CF65_00112 IPR006043 Xanthine/uracil/vitamin C permease CF65_00113 IPR005765 Uracil phosphoribosyl transferase CF65_00113 IPR029057 Phosphoribosyltransferase-like CF65_00113 IPR034332 CF65_00113 CF65_00114 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CF65_00114 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CF65_00114 IPR027304 Trigger factor/SurA domain CF65_00115 IPR006335 Glutathione biosynthesis bifunctional protein GshAB CF65_00115 IPR007370 Glutamate--cysteine ligase CF65_00115 IPR011095 D-alanine--D-alanine ligase, C-terminal CF65_00115 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CF65_00116 IPR000917 Sulfatase CF65_00116 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CF65_00116 IPR017850 Alkaline-phosphatase-like, core domain CF65_00119 IPR001907 ATP-dependent Clp protease proteolytic subunit CF65_00119 IPR018215 ClpP, active site CF65_00119 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CF65_00119 IPR029045 ClpP/crotonase-like domain CF65_00119 IPR033135 CF65_00119 CF65_00120 IPR003593 AAA+ ATPase domain CF65_00120 IPR003959 ATPase, AAA-type, core CF65_00120 IPR004487 Clp protease, ATP-binding subunit ClpX CF65_00120 IPR010603 Zinc finger, ClpX C4-type CF65_00120 IPR019489 Clp ATPase, C-terminal CF65_00120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00120 IPR038366 CF65_00120 CF65_00124 IPR010982 Lambda repressor-like, DNA-binding domain CF65_00124 IPR039554 CF65_00124 CF65_00125 IPR009241 Addiction module killer protein CF65_00126 IPR008535 Protein of unknown function DUF817 CF65_00128 IPR001757 Cation-transporting P-type ATPase CF65_00128 IPR006121 Heavy metal-associated domain, HMA CF65_00128 IPR008250 P-type ATPase, A domain CF65_00128 IPR017969 Heavy-metal-associated, conserved site CF65_00128 IPR018303 P-type ATPase, phosphorylation site CF65_00128 IPR023214 HAD-like domain CF65_00128 IPR023298 P-type ATPase, transmembrane domain CF65_00128 IPR023299 P-type ATPase, cytoplasmic domain N CF65_00128 IPR027256 Cation-transporting P-type ATPase, subfamily IB CF65_00128 IPR036163 CF65_00128 CF65_00128 IPR036412 CF65_00128 CF65_00131 IPR000551 MerR-type HTH domain CF65_00131 IPR009061 DNA binding domain, putative CF65_00131 IPR011789 Cu(I)-responsive transcriptional regulator CF65_00131 IPR015358 Transcription regulator MerR, DNA binding CF65_00132 IPR023370 TsaA-like domain CF65_00132 IPR036413 CF65_00132 CF65_00132 IPR036414 CF65_00132 CF65_00134 IPR000537 UbiA prenyltransferase family CF65_00134 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase CF65_00134 IPR026046 UbiA prenyltransferase domain containing protein 1 CF65_00135 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase CF65_00135 IPR010203 Regulator of ribonuclease activity A CF65_00135 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria CF65_00135 IPR036704 CF65_00135 CF65_00136 IPR001898 Sodium/sulphate symporter CF65_00136 IPR031312 CF65_00136 CF65_00137 IPR006839 Ribosome-associated, YjgA CF65_00137 IPR023153 PSPTO4464-like domain CF65_00139 IPR002510 TldD/PmbA CF65_00139 IPR035068 CF65_00139 CF65_00139 IPR036059 CF65_00139 CF65_00141 IPR000836 Phosphoribosyltransferase domain CF65_00141 IPR005904 Hypoxanthine phosphoribosyl transferase CF65_00141 IPR029057 Phosphoribosyltransferase-like CF65_00142 IPR004381 Glycerate kinase CF65_00142 IPR018193 Glycerate kinase, flavodoxin-like domain CF65_00142 IPR018197 Glycerate kinase, restriction-enzyme-like fold CF65_00142 IPR036129 CF65_00142 CF65_00143 IPR003474 Gluconate transporter CF65_00144 IPR008599 Putative sugar diacid recognition CF65_00144 IPR025736 PucR C-terminal helix-turn-helix domain CF65_00145 IPR001584 Integrase, catalytic core CF65_00145 IPR012337 Ribonuclease H-like domain CF65_00146 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CF65_00146 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CF65_00146 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CF65_00146 IPR036220 CF65_00146 CF65_00148 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CF65_00148 IPR001650 Helicase, C-terminal CF65_00148 IPR005580 DbpA, RNA-binding CF65_00148 IPR011545 DEAD/DEAH box helicase domain CF65_00148 IPR012677 Nucleotide-binding, alpha-beta plait CF65_00148 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CF65_00148 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00148 IPR028618 ATP-dependent RNA helicase DeaD CF65_00150 IPR011990 Tetratricopeptide-like helical domain CF65_00150 IPR013105 Tetratricopeptide TPR2 CF65_00150 IPR019734 Tetratricopeptide repeat CF65_00150 IPR023605 Lipoprotein NlpI CF65_00151 IPR001247 Exoribonuclease, phosphorolytic domain 1 CF65_00151 IPR003029 Ribosomal protein S1, RNA-binding domain CF65_00151 IPR004087 K Homology domain CF65_00151 IPR004088 K Homology domain, type 1 CF65_00151 IPR012162 Polyribonucleotide nucleotidyltransferase CF65_00151 IPR012340 Nucleic acid-binding, OB-fold CF65_00151 IPR015847 Exoribonuclease, phosphorolytic domain 2 CF65_00151 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CF65_00151 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00151 IPR022967 RNA-binding domain, S1 CF65_00151 IPR027408 PNPase/RNase PH domain CF65_00151 IPR036345 CF65_00151 CF65_00151 IPR036612 CF65_00151 CF65_00153 IPR004375 Conserved hypothetical protein CHP00022 CF65_00153 IPR037012 CF65_00153 CF65_00158 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CF65_00158 IPR036505 CF65_00158 CF65_00160 IPR012902 Prokaryotic N-terminal methylation site CF65_00161 IPR001482 Type II secretion system protein E CF65_00161 IPR007831 General secretory system II, protein E, N-terminal CF65_00161 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00161 IPR037257 CF65_00161 CF65_00162 IPR001992 Type II secretion system conserved site CF65_00162 IPR003004 GspF/PilC family CF65_00162 IPR018076 Type II secretion system F domain CF65_00163 IPR000045 Prepilin type IV endopeptidase, peptidase domain CF65_00164 IPR001977 Dephospho-CoA kinase CF65_00164 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00165 IPR005584 DNA gyrase inhibitor YacG CF65_00165 IPR013088 Zinc finger, NHR/GATA-type CF65_00166 IPR016181 Acyl-CoA N-acyltransferase CF65_00166 IPR031165 CF65_00166 CF65_00167 IPR001463 Sodium:alanine symporter CF65_00168 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein CF65_00168 IPR036567 CF65_00168 CF65_00169 IPR035279 CF65_00169 CF65_00171 IPR002197 DNA binding HTH domain, Fis-type CF65_00171 IPR005412 DNA-binding protein Fis CF65_00171 IPR009057 Homeodomain-like CF65_00172 IPR001269 tRNA-dihydrouridine synthase CF65_00172 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CF65_00172 IPR013785 Aldolase-type TIM barrel CF65_00172 IPR018517 tRNA-dihydrouridine synthase, conserved site CF65_00172 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CF65_00172 IPR032887 CF65_00172 CF65_00174 IPR004498 Ribosomal protein L11 methyltransferase CF65_00174 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00175 IPR003812 Fido domain CF65_00175 IPR036597 CF65_00175 CF65_00176 IPR001734 Sodium/solute symporter CF65_00176 IPR011849 Sodium/pantothenate symporter CF65_00176 IPR018212 Sodium/solute symporter, conserved site CF65_00176 IPR038377 CF65_00176 CF65_00177 IPR010398 Protein of unknown function DUF997 CF65_00179 IPR007655 Protein of unknown function DUF560 CF65_00179 IPR011990 Tetratricopeptide-like helical domain CF65_00180 IPR001677 Solute-binding protein, transferrin-binding protein-like CF65_00180 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CF65_00182 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CF65_00182 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CF65_00182 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal CF65_00182 IPR005482 Biotin carboxylase, C-terminal CF65_00182 IPR011054 Rudiment single hybrid motif CF65_00182 IPR013815 ATP-grasp fold, subdomain 1 CF65_00182 IPR016185 Pre-ATP-grasp domain CF65_00183 IPR000089 Biotin/lipoyl attachment CF65_00183 IPR001249 Acetyl-CoA biotin carboxyl carrier CF65_00183 IPR001882 Biotin-binding site CF65_00183 IPR011053 Single hybrid motif CF65_00185 IPR001874 Dehydroquinase, class II CF65_00185 IPR018509 Dehydroquinase, class II, conserved site CF65_00185 IPR036441 CF65_00185 CF65_00186 IPR010196 O-succinylbenzoic acid (OSB) synthetase CF65_00186 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CF65_00186 IPR029017 Enolase N-terminal domain-like CF65_00186 IPR029065 Enolase C-terminal domain-like CF65_00186 IPR036849 CF65_00186 CF65_00187 IPR002934 Nucleotidyl transferase domain CF65_00188 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CF65_00189 IPR001753 Crotonase superfamily CF65_00189 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase CF65_00189 IPR014748 Crontonase, C-terminal CF65_00189 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CF65_00189 IPR029045 ClpP/crotonase-like domain CF65_00190 IPR000652 Triosephosphate isomerase CF65_00190 IPR013785 Aldolase-type TIM barrel CF65_00190 IPR020861 Triosephosphate isomerase, active site CF65_00190 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CF65_00190 IPR035990 CF65_00190 CF65_00191 IPR016181 Acyl-CoA N-acyltransferase CF65_00194 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN CF65_00194 IPR006638 Elongator protein 3/MiaB/NifB CF65_00194 IPR007197 Radical SAM CF65_00194 IPR023404 Radical SAM, alpha/beta horseshoe CF65_00195 IPR019617 Domain of unknown function DUF2489 CF65_00196 IPR007336 Der GTPase activator CF65_00198 IPR016192 APOBEC/CMP deaminase, zinc-binding CF65_00198 IPR016193 Cytidine deaminase-like CF65_00198 IPR028883 tRNA-specific adenosine deaminase CF65_00200 IPR000398 Thymidylate synthase CF65_00200 IPR020940 Thymidylate synthase, active site CF65_00200 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CF65_00200 IPR036926 CF65_00200 CF65_00201 IPR001640 Prolipoprotein diacylglyceryl transferase CF65_00202 IPR002781 Transmembrane protein TauE like CF65_00204 IPR000086 NUDIX hydrolase domain CF65_00204 IPR015797 NUDIX hydrolase domain-like CF65_00204 IPR020084 NUDIX hydrolase, conserved site CF65_00204 IPR020476 NUDIX hydrolase CF65_00204 IPR022927 RNA pyrophosphohydrolase RppH CF65_00205 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CF65_00205 IPR023064 D-ribose pyranase CF65_00205 IPR023750 RbsD-like domain CF65_00207 IPR003439 ABC transporter-like CF65_00207 IPR003593 AAA+ ATPase domain CF65_00207 IPR017871 ABC transporter, conserved site CF65_00207 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00208 IPR001851 ABC transporter, permease CF65_00209 IPR025997 Periplasmic binding protein domain CF65_00209 IPR028082 Periplasmic binding protein-like I CF65_00212 IPR002139 Ribokinase CF65_00212 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CF65_00212 IPR011611 Carbohydrate kinase PfkB CF65_00212 IPR011877 Ribokinase, bacterial CF65_00212 IPR029056 Ribokinase-like CF65_00213 IPR002059 Cold-shock protein, DNA-binding CF65_00213 IPR011129 Cold shock protein CF65_00213 IPR012156 Cold shock, CspA CF65_00213 IPR012340 Nucleic acid-binding, OB-fold CF65_00213 IPR019844 Cold-shock conserved site CF65_00214 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CF65_00214 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_00214 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CF65_00214 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CF65_00214 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00214 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CF65_00214 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CF65_00216 IPR007577 Glycosyltransferase, DXD sugar-binding motif CF65_00216 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00218 IPR000362 Fumarate lyase family CF65_00218 IPR008948 L-Aspartase-like CF65_00218 IPR009049 Argininosuccinate lyase CF65_00218 IPR020557 Fumarate lyase, conserved site CF65_00218 IPR022761 Fumarate lyase, N-terminal CF65_00218 IPR024083 Fumarase/histidase, N-terminal CF65_00218 IPR029419 Argininosuccinate lyase, C-terminal CF65_00221 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CF65_00221 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CF65_00221 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CF65_00221 IPR014362 Glutamate dehydrogenase CF65_00221 IPR033524 CF65_00221 CF65_00221 IPR036291 CF65_00221 CF65_00223 IPR002226 Catalase haem-binding site CF65_00223 IPR010582 Catalase immune-responsive domain CF65_00223 IPR011614 Catalase core domain CF65_00223 IPR018028 Catalase, mono-functional, haem-containing CF65_00223 IPR020835 Catalase-like domain CF65_00223 IPR024708 Catalase active site CF65_00223 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CF65_00223 IPR037060 CF65_00223 CF65_00229 IPR004013 PHP, C-terminal CF65_00229 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CF65_00229 IPR004805 DNA polymerase III, alpha subunit CF65_00229 IPR011708 Bacterial DNA polymerase III, alpha subunit CF65_00229 IPR012337 Ribonuclease H-like domain CF65_00229 IPR029460 DNA polymerase, helix-hairpin-helix motif CF65_00231 IPR000873 AMP-dependent synthetase/ligase CF65_00231 IPR020845 AMP-binding, conserved site CF65_00234 IPR005594 YadA-like, C-terminal CF65_00234 IPR008635 Coiled stalk of trimeric autotransporter adhesin CF65_00234 IPR008640 Head domain of trimeric autotransporter adhesin CF65_00234 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_00234 IPR024973 ESPR domain CF65_00236 IPR005144 ATP-cone CF65_00236 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic CF65_00236 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CF65_00241 IPR001989 Radical-activating enzyme, conserved site CF65_00241 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic CF65_00241 IPR013785 Aldolase-type TIM barrel CF65_00244 IPR001130 TatD family CF65_00244 IPR018228 Deoxyribonuclease, TatD-related, conserved site CF65_00244 IPR032466 CF65_00244 CF65_00245 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CF65_00245 IPR035093 CF65_00245 CF65_00247 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CF65_00247 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CF65_00247 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CF65_00247 IPR029000 Cyclophilin-like domain CF65_00249 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CF65_00249 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00249 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CF65_00249 IPR015803 Cysteine-tRNA ligase CF65_00249 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CF65_00249 IPR032678 CF65_00249 CF65_00250 IPR003698 Lipoyl synthase CF65_00250 IPR006638 Elongator protein 3/MiaB/NifB CF65_00250 IPR007197 Radical SAM CF65_00250 IPR013785 Aldolase-type TIM barrel CF65_00250 IPR031691 CF65_00250 CF65_00251 IPR000544 Octanoyltransferase CF65_00251 IPR004143 Biotin/lipoate A/B protein ligase CF65_00251 IPR020605 Octanoyltransferase, conserved site CF65_00252 IPR007454 Uncharacterised protein family UPF0250 CF65_00252 IPR027471 YbeD-like domain CF65_00254 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CF65_00254 IPR012338 Beta-lactamase/transpeptidase-like CF65_00254 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CF65_00254 IPR015956 Penicillin-binding protein-associated CF65_00254 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CF65_00254 IPR037167 CF65_00254 CF65_00256 IPR007730 Sporulation-related domain CF65_00256 IPR009009 RlpA-like double-psi beta-barrel domain CF65_00256 IPR012997 Rare lipoprotein A, bacterial CF65_00256 IPR034718 CF65_00256 CF65_00256 IPR036680 CF65_00256 CF65_00256 IPR036908 CF65_00256 CF65_00257 IPR001182 Cell cycle protein FtsW/RodA CF65_00257 IPR011923 Rod shape-determining protein RodA CF65_00257 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CF65_00258 IPR001460 Penicillin-binding protein, transpeptidase CF65_00258 IPR005311 Penicillin-binding protein, dimerisation domain CF65_00258 IPR012338 Beta-lactamase/transpeptidase-like CF65_00258 IPR017790 Penicillin-binding protein 2 CF65_00258 IPR036138 CF65_00258 CF65_00259 IPR003742 SPOUT methyltransferase, predicted CF65_00259 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_00259 IPR029028 Alpha/beta knot methyltransferases CF65_00260 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CF65_00263 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CF65_00263 IPR001650 Helicase, C-terminal CF65_00263 IPR011545 DEAD/DEAH box helicase domain CF65_00263 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CF65_00263 IPR023554 RNA helicase, ATP-dependent, RhlB-type CF65_00263 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00265 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CF65_00265 IPR003593 AAA+ ATPase domain CF65_00265 IPR004665 Transcription termination factor Rho CF65_00265 IPR011112 Rho termination factor, N-terminal CF65_00265 IPR011113 Rho termination factor, RNA-binding CF65_00265 IPR011129 Cold shock protein CF65_00265 IPR012340 Nucleic acid-binding, OB-fold CF65_00265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00266 IPR005829 Sugar transporter, conserved site CF65_00266 IPR011701 Major facilitator superfamily CF65_00266 IPR036259 CF65_00266 CF65_00268 IPR003231 Acyl carrier protein (ACP) CF65_00268 IPR006162 Phosphopantetheine attachment site CF65_00268 IPR009081 Acyl carrier protein-like CF65_00268 IPR036736 CF65_00268 CF65_00269 IPR002347 Glucose/ribitol dehydrogenase CF65_00269 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CF65_00269 IPR020904 Short-chain dehydrogenase/reductase, conserved site CF65_00269 IPR036291 CF65_00269 CF65_00270 IPR001227 Acyl transferase domain CF65_00270 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CF65_00270 IPR014043 Acyl transferase CF65_00270 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CF65_00270 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CF65_00270 IPR020801 Polyketide synthase, acyl transferase domain CF65_00270 IPR024925 Malonyl CoA-acyl carrier protein transacylase CF65_00272 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CF65_00272 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal CF65_00272 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CF65_00272 IPR016039 Thiolase-like CF65_00273 IPR003664 Fatty acid synthesis PlsX protein CF65_00273 IPR012281 Phospholipid biosynthesis protein, PlsX-like CF65_00274 IPR002677 Ribosomal protein L32p CF65_00274 IPR011332 Zinc-binding ribosomal protein CF65_00275 IPR003772 Protein of unknown function DUF177 CF65_00276 IPR004472 Dethiobiotin synthase BioD CF65_00276 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00277 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CF65_00277 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00278 IPR007398 Protein of unknown function DUF452 CF65_00278 IPR029058 Alpha/Beta hydrolase fold CF65_00279 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CF65_00279 IPR004839 Aminotransferase, class I/classII CF65_00279 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_00279 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_00279 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00280 IPR005814 Aminotransferase class-III CF65_00280 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CF65_00280 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_00280 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_00280 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00281 IPR003817 Phosphatidylserine decarboxylase-related CF65_00281 IPR033177 CF65_00281 CF65_00281 IPR033178 CF65_00281 CF65_00282 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CF65_00282 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CF65_00282 IPR036944 CF65_00282 CF65_00283 IPR002478 PUA domain CF65_00283 IPR015947 PUA-like domain CF65_00283 IPR036974 CF65_00283 CF65_00286 IPR036393 CF65_00286 CF65_00287 IPR001048 Aspartate/glutamate/uridylate kinase CF65_00287 IPR036393 CF65_00287 CF65_00288 IPR010619 Domain of unknown function DUF1212 CF65_00290 IPR024528 Domain of unknown function DUF3815 CF65_00292 IPR001796 Dihydrofolate reductase domain CF65_00292 IPR012259 Dihydrofolate reductase CF65_00292 IPR017925 Dihydrofolate reductase conserved site CF65_00292 IPR024072 Dihydrofolate reductase-like domain CF65_00296 IPR000644 CBS domain CF65_00296 IPR002550 Domain of unknown function DUF21 CF65_00296 IPR005170 Transporter-associated domain CF65_00296 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CF65_00296 IPR036318 CF65_00296 CF65_00300 IPR011088 Bacteriophage phiNM3, A0EWY4 CF65_00301 IPR001130 TatD family CF65_00301 IPR015991 Uncharacterised deoxyribonuclease TatD-type CF65_00301 IPR018228 Deoxyribonuclease, TatD-related, conserved site CF65_00301 IPR032466 CF65_00301 CF65_00302 IPR004622 DNA polymerase III, delta prime subunit CF65_00302 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CF65_00302 IPR015199 DNA polymerase III, delta subunit, C-terminal CF65_00302 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00303 IPR018094 Thymidylate kinase CF65_00303 IPR018095 Thymidylate kinase, conserved site CF65_00303 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00303 IPR039430 CF65_00303 CF65_00305 IPR003770 Uncharacterised protein family UPF0755, YceG-like CF65_00306 IPR002187 Nitrogen regulatory protein PII CF65_00306 IPR002332 Nitrogen regulatory protein P-II, urydylation site CF65_00306 IPR011322 Nitrogen regulatory PII-like, alpha/beta CF65_00306 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CF65_00306 IPR017918 Nitrogen regulatory protein PII, conserved site CF65_00308 IPR001034 HTH DeoR N-terminal domain CF65_00308 IPR014036 DeoR C-terminal sensor domain CF65_00308 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CF65_00308 IPR036388 CF65_00308 CF65_00308 IPR036390 CF65_00308 CF65_00308 IPR037171 CF65_00308 CF65_00309 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CF65_00309 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CF65_00309 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CF65_00309 IPR013328 Dehydrogenase, multihelical CF65_00309 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CF65_00309 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CF65_00309 IPR036291 CF65_00309 CF65_00310 IPR010737 Protein of unknown function, DUF1537 CF65_00310 IPR031475 CF65_00310 CF65_00310 IPR037051 CF65_00310 CF65_00311 IPR001303 Class II aldolase/adducin N-terminal CF65_00311 IPR036409 CF65_00311 CF65_00312 IPR013022 Xylose isomerase-like, TIM barrel domain CF65_00312 IPR026040 Hydroxypyruvate isomerase-like CF65_00312 IPR036237 CF65_00312 CF65_00316 IPR000150 Cof protein CF65_00316 IPR006379 HAD-superfamily hydrolase, subfamily IIB CF65_00316 IPR023214 HAD-like domain CF65_00316 IPR036412 CF65_00316 CF65_00317 IPR000432 DNA mismatch repair protein MutS, C-terminal CF65_00317 IPR005748 DNA mismatch repair protein MutS, type 1 CF65_00317 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CF65_00317 IPR007696 DNA mismatch repair protein MutS, core CF65_00317 IPR007860 DNA mismatch repair protein MutS, connector domain CF65_00317 IPR007861 DNA mismatch repair protein MutS, clamp CF65_00317 IPR016151 DNA mismatch repair protein MutS, N-terminal CF65_00317 IPR017261 DNA mismatch repair protein Msh6 CF65_00317 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00317 IPR036187 CF65_00317 CF65_00317 IPR036678 CF65_00317 CF65_00318 IPR025391 Domain of unknown function DUF4123 CF65_00323 IPR007536 Ribosomal RNA small subunit methyltransferase J CF65_00323 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00324 IPR010280 (Uracil-5)-methyltransferase family CF65_00324 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA CF65_00324 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00324 IPR030390 CF65_00324 CF65_00324 IPR030391 CF65_00324 CF65_00325 IPR007335 Protein of unknown function DUF413 CF65_00326 IPR001853 DSBA-like thioredoxin domain CF65_00326 IPR017937 Thioredoxin, conserved site CF65_00326 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CF65_00326 IPR036249 CF65_00326 CF65_00327 IPR009383 Protein of unknown function DUF1040 CF65_00327 IPR038134 CF65_00327 CF65_00329 IPR013482 Molybdenum cofactor guanylyltransferase CF65_00329 IPR025877 MobA-like NTP transferase domain CF65_00329 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00332 IPR000032 Phosphocarrier HPr protein-like CF65_00332 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CF65_00332 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CF65_00332 IPR002178 PTS EIIA type-2 domain CF65_00332 IPR016152 Phosphotransferase/anion transporter CF65_00332 IPR016258 Phosphotransferase system, FPr CF65_00332 IPR035895 CF65_00332 CF65_00333 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CF65_00333 IPR011611 Carbohydrate kinase PfkB CF65_00333 IPR017583 Tagatose/fructose phosphokinase CF65_00333 IPR022463 Fructose 1-phosphate kinase CF65_00333 IPR029056 Ribokinase-like CF65_00335 IPR003352 Phosphotransferase system, EIIC CF65_00335 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CF65_00335 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CF65_00335 IPR006327 Phosphotransferase system, fructose IIC component CF65_00335 IPR036095 CF65_00335 CF65_00340 IPR003680 Flavodoxin-like fold CF65_00340 IPR029039 Flavoprotein-like CF65_00341 IPR005545 YCII-related CF65_00341 IPR011008 Dimeric alpha-beta barrel CF65_00343 IPR007138 Antibiotic biosynthesis monooxygenase-like domain CF65_00343 IPR011008 Dimeric alpha-beta barrel CF65_00344 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CF65_00344 IPR005807 SecE subunit of protein translocation complex CF65_00344 IPR038379 CF65_00344 CF65_00345 IPR001062 Transcription antitermination protein, NusG CF65_00345 IPR005824 KOW CF65_00345 IPR006645 NusG, N-terminal CF65_00345 IPR008991 Translation protein SH3-like domain CF65_00345 IPR014722 Ribosomal protein L2 domain 2 CF65_00345 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CF65_00345 IPR036735 CF65_00345 CF65_00347 IPR000911 Ribosomal protein L11/L12 CF65_00347 IPR006519 Ribosomal protein L11, bacterial-type CF65_00347 IPR020783 Ribosomal protein L11, C-terminal CF65_00347 IPR020784 Ribosomal protein L11, N-terminal CF65_00347 IPR036769 CF65_00347 CF65_00347 IPR036796 CF65_00347 CF65_00348 IPR002143 Ribosomal protein L1 CF65_00348 IPR005878 Ribosomal protein L1, bacterial-type CF65_00348 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CF65_00348 IPR023673 Ribosomal protein L1, conserved site CF65_00348 IPR023674 Ribosomal protein L1-like CF65_00348 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CF65_00350 IPR001790 Ribosomal protein L10/acidic P0 CF65_00350 IPR002363 Ribosomal protein L10, eubacterial, conserved site CF65_00350 IPR022973 Ribosomal protein L10 CF65_00355 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 CF65_00355 IPR007121 RNA polymerase, beta subunit, conserved site CF65_00355 IPR007641 RNA polymerase Rpb2, domain 7 CF65_00355 IPR007642 RNA polymerase Rpb2, domain 2 CF65_00355 IPR007644 RNA polymerase, beta subunit, protrusion CF65_00355 IPR007645 RNA polymerase Rpb2, domain 3 CF65_00355 IPR010243 DNA-directed RNA polymerase, beta subunit CF65_00355 IPR014724 RNA polymerase Rpb2, OB-fold CF65_00355 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CF65_00355 IPR037033 CF65_00355 CF65_00355 IPR037034 CF65_00355 CF65_00356 IPR000722 RNA polymerase, alpha subunit CF65_00356 IPR006592 RNA polymerase, N-terminal CF65_00356 IPR007066 RNA polymerase Rpb1, domain 3 CF65_00356 IPR007080 RNA polymerase Rpb1, domain 1 CF65_00356 IPR007081 RNA polymerase Rpb1, domain 5 CF65_00356 IPR007083 RNA polymerase Rpb1, domain 4 CF65_00356 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CF65_00356 IPR038120 CF65_00356 CF65_00357 IPR002686 Transposase IS200-like CF65_00357 IPR036515 CF65_00357 CF65_00358 IPR000266 Ribosomal protein S17 CF65_00358 IPR012340 Nucleic acid-binding, OB-fold CF65_00358 IPR019979 Ribosomal protein S17, conserved site CF65_00358 IPR019984 Ribosomal protein S17, bacterial-type CF65_00359 IPR001854 Ribosomal protein L29 CF65_00359 IPR018254 Ribosomal protein L29, conserved site CF65_00359 IPR036049 CF65_00359 CF65_00361 IPR000114 Ribosomal protein L16 CF65_00361 IPR016180 Ribosomal protein L10e/L16 CF65_00361 IPR020798 Ribosomal protein L16, conserved site CF65_00361 IPR036920 CF65_00361 CF65_00362 IPR001351 Ribosomal protein S3, C-terminal CF65_00362 IPR004044 K Homology domain, type 2 CF65_00362 IPR004087 K Homology domain CF65_00362 IPR005704 Ribosomal protein S3, bacterial CF65_00362 IPR009019 K homology domain, prokaryotic type CF65_00362 IPR015946 K homology domain-like, alpha/beta CF65_00362 IPR018280 Ribosomal protein S3, conserved site CF65_00362 IPR036419 CF65_00362 CF65_00363 IPR001063 Ribosomal protein L22/L17 CF65_00363 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CF65_00363 IPR018260 Ribosomal protein L22/L17, conserved site CF65_00363 IPR036394 CF65_00363 CF65_00365 IPR002222 Ribosomal protein S19/S15 CF65_00365 IPR005732 Ribosomal protein S19, bacterial-type CF65_00365 IPR020934 Ribosomal protein S19 conserved site CF65_00365 IPR023575 Ribosomal protein S19, superfamily CF65_00366 IPR002171 Ribosomal protein L2 CF65_00366 IPR005880 Ribosomal protein L2, bacterial/organellar-type CF65_00366 IPR008991 Translation protein SH3-like domain CF65_00366 IPR012340 Nucleic acid-binding, OB-fold CF65_00366 IPR014722 Ribosomal protein L2 domain 2 CF65_00366 IPR014726 Ribosomal protein L2, domain 3 CF65_00366 IPR022666 Ribosomal Proteins L2, RNA binding domain CF65_00366 IPR022669 Ribosomal protein L2, C-terminal CF65_00366 IPR022671 Ribosomal protein L2, conserved site CF65_00367 IPR001014 Ribosomal protein L23/L25, conserved site CF65_00367 IPR012677 Nucleotide-binding, alpha-beta plait CF65_00367 IPR012678 Ribosomal protein L23/L15e core domain CF65_00367 IPR013025 Ribosomal protein L25/L23 CF65_00368 IPR002136 Ribosomal protein L4/L1e CF65_00368 IPR013005 Ribosomal protein L4/L1e, bacterial-type CF65_00368 IPR023574 Ribosomal protein L4 domain CF65_00369 IPR000597 Ribosomal protein L3 CF65_00369 IPR009000 Translation protein, beta-barrel domain CF65_00369 IPR019926 Ribosomal protein L3, conserved site CF65_00369 IPR019927 Ribosomal protein L3, bacterial/organelle-type CF65_00370 IPR001848 Ribosomal protein S10 CF65_00370 IPR018268 Ribosomal protein S10, conserved site CF65_00370 IPR027486 Ribosomal protein S10 domain CF65_00370 IPR036838 CF65_00370 CF65_00371 IPR000847 Transcription regulator HTH, LysR CF65_00371 IPR005119 LysR, substrate-binding CF65_00371 IPR036388 CF65_00371 CF65_00371 IPR036390 CF65_00371 CF65_00372 IPR004163 Coenzyme A transferase binding site CF65_00372 IPR004165 Coenzyme A transferase family I CF65_00372 IPR012792 3-oxoacid CoA-transferase, subunit A CF65_00372 IPR037171 CF65_00372 CF65_00373 IPR004165 Coenzyme A transferase family I CF65_00373 IPR012791 3-oxoacid CoA-transferase, subunit B CF65_00373 IPR037171 CF65_00373 CF65_00374 IPR006160 Short chain fatty acid transporter AtoE CF65_00374 IPR006161 Conserved hypothetical protein CHP00336 CF65_00377 IPR002155 Thiolase CF65_00377 IPR016039 Thiolase-like CF65_00377 IPR020610 Thiolase, active site CF65_00377 IPR020613 Thiolase, conserved site CF65_00377 IPR020615 Thiolase, acyl-enzyme intermediate active site CF65_00377 IPR020616 Thiolase, N-terminal CF65_00377 IPR020617 Thiolase, C-terminal CF65_00378 IPR000485 AsnC-type HTH domain CF65_00378 IPR011008 Dimeric alpha-beta barrel CF65_00378 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CF65_00378 IPR019887 Transcription regulator AsnC-type, C-terminal CF65_00378 IPR019888 Transcription regulator AsnC-type CF65_00378 IPR036388 CF65_00378 CF65_00378 IPR036390 CF65_00378 CF65_00379 IPR018385 C4-dicarboxylate anaerobic carrier-like CF65_00380 IPR001048 Aspartate/glutamate/uridylate kinase CF65_00380 IPR003964 Carbamate kinase CF65_00380 IPR036393 CF65_00380 CF65_00381 IPR002292 Ornithine/putrescine carbamoyltransferase CF65_00381 IPR006130 Aspartate/ornithine carbamoyltransferase CF65_00381 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CF65_00381 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CF65_00381 IPR024904 Ornithine carbamoyltransferase CF65_00381 IPR036901 CF65_00381 CF65_00383 IPR001807 Chloride channel, voltage gated CF65_00383 IPR014743 Chloride channel, core CF65_00384 IPR001269 tRNA-dihydrouridine synthase CF65_00384 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN CF65_00384 IPR013785 Aldolase-type TIM barrel CF65_00384 IPR018517 tRNA-dihydrouridine synthase, conserved site CF65_00386 IPR004618 Aspartate--ammonia ligase CF65_00387 IPR000485 AsnC-type HTH domain CF65_00387 IPR011008 Dimeric alpha-beta barrel CF65_00387 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CF65_00387 IPR019887 Transcription regulator AsnC-type, C-terminal CF65_00387 IPR019888 Transcription regulator AsnC-type CF65_00387 IPR036388 CF65_00387 CF65_00387 IPR036390 CF65_00387 CF65_00388 IPR000845 Nucleoside phosphorylase domain CF65_00388 IPR010058 Uridine phosphorylase CF65_00388 IPR018016 Nucleoside phosphorylase, conserved site CF65_00388 IPR035994 CF65_00388 CF65_00390 IPR002549 Uncharacterised protein family UPF0118 CF65_00391 IPR006659 Arsenate reductase CF65_00391 IPR006660 Arsenate reductase-like CF65_00391 IPR036249 CF65_00391 CF65_00395 IPR035318 CF65_00395 CF65_00396 IPR005589 Protein of unknown function DUF331 CF65_00397 IPR005839 Methylthiotransferase CF65_00397 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CF65_00397 IPR006638 Elongator protein 3/MiaB/NifB CF65_00397 IPR007197 Radical SAM CF65_00397 IPR013848 Methylthiotransferase, N-terminal CF65_00397 IPR020612 Methylthiotransferase, conserved site CF65_00397 IPR023404 Radical SAM, alpha/beta horseshoe CF65_00397 IPR038135 CF65_00397 CF65_00398 IPR017867 Protein-tyrosine phosphatase, low molecular weight CF65_00398 IPR023485 Phosphotyrosine protein phosphatase I superfamily CF65_00398 IPR036196 CF65_00398 CF65_00399 IPR007420 Protein of unknown function DUF465 CF65_00401 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CF65_00402 IPR007497 Protein of unknown function DUF541 CF65_00404 IPR009671 Regulator of ribonuclease activity B domain CF65_00404 IPR016716 Regulator of ribonuclease activity B CF65_00404 IPR036701 CF65_00404 CF65_00406 IPR001185 Large-conductance mechanosensitive channel CF65_00406 IPR019823 Large-conductance mechanosensitive channel, conserved site CF65_00406 IPR036019 CF65_00406 CF65_00406 IPR037673 CF65_00406 CF65_00407 IPR003148 Regulator of K+ conductance, N-terminal CF65_00407 IPR006036 Potassium uptake protein TrkA CF65_00407 IPR006037 Regulator of K+ conductance, C-terminal CF65_00407 IPR036291 CF65_00407 CF65_00407 IPR036721 CF65_00407 CF65_00408 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p CF65_00408 IPR004573 rRNA small subunit methyltransferase B CF65_00408 IPR006027 NusB/RsmB/TIM44 CF65_00408 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CF65_00408 IPR023267 RNA (C5-cytosine) methyltransferase CF65_00408 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00408 IPR035926 CF65_00408 CF65_00409 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CF65_00409 IPR002376 Formyl transferase, N-terminal CF65_00409 IPR005793 Formyl transferase, C-terminal CF65_00409 IPR005794 Methionyl-tRNA formyltransferase CF65_00409 IPR011034 Formyl transferase, C-terminal-like CF65_00409 IPR036477 CF65_00409 CF65_00409 IPR037022 CF65_00409 CF65_00410 IPR023635 Peptide deformylase CF65_00410 IPR036821 CF65_00410 CF65_00414 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase CF65_00414 IPR006543 Histidinol-phosphate phosphatase CF65_00414 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CF65_00414 IPR023214 HAD-like domain CF65_00414 IPR036412 CF65_00414 CF65_00415 IPR003439 ABC transporter-like CF65_00415 IPR003593 AAA+ ATPase domain CF65_00415 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria CF65_00415 IPR017871 ABC transporter, conserved site CF65_00415 IPR018449 NIL domain CF65_00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00416 IPR000515 MetI-like domain CF65_00416 IPR035906 CF65_00416 CF65_00417 IPR004872 Lipoprotein NlpA family CF65_00419 IPR005247 YbhB/YbcL CF65_00419 IPR008914 Phosphatidylethanolamine-binding protein PEBP CF65_00419 IPR036610 CF65_00419 CF65_00420 IPR001537 tRNA/rRNA methyltransferase, SpoU type CF65_00420 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CF65_00420 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_00420 IPR029028 Alpha/beta knot methyltransferases CF65_00422 IPR007488 Protein of unknown function DUF535 CF65_00423 IPR006073 GTP binding domain CF65_00423 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CF65_00423 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00425 IPR000523 Magnesium chelatase, ChlI subunit CF65_00425 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00425 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00426 IPR000523 Magnesium chelatase, ChlI subunit CF65_00429 IPR007710 Nucleoside 2-deoxyribosyltransferase CF65_00429 IPR011611 Carbohydrate kinase PfkB CF65_00429 IPR029056 Ribokinase-like CF65_00430 IPR000415 Nitroreductase-like CF65_00431 IPR003265 HhH-GPD domain CF65_00431 IPR011257 DNA glycosylase CF65_00431 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CF65_00432 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00434 IPR001826 RHS protein CF65_00434 IPR006530 YD repeat CF65_00434 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CF65_00434 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CF65_00434 IPR022385 Rhs repeat-associated core CF65_00434 IPR031325 CF65_00434 CF65_00434 IPR037026 CF65_00434 CF65_00435 IPR028264 Immunity protein 9 CF65_00437 IPR003115 ParB/Sulfiredoxin CF65_00437 IPR011111 RepB plasmid partition CF65_00437 IPR036086 CF65_00437 CF65_00438 IPR003115 ParB/Sulfiredoxin CF65_00438 IPR011111 RepB plasmid partition CF65_00438 IPR036086 CF65_00438 CF65_00439 IPR006119 Resolvase, N-terminal CF65_00439 IPR011109 Recombinase CF65_00439 IPR036162 CF65_00439 CF65_00439 IPR038109 CF65_00439 CF65_00443 IPR009492 TniQ CF65_00444 IPR008868 Bacterial TniB CF65_00444 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00446 IPR001584 Integrase, catalytic core CF65_00446 IPR012337 Ribonuclease H-like domain CF65_00446 IPR015126 Mu DNA binding, I gamma subdomain CF65_00446 IPR015378 Transposase-like, Mu, C-terminal CF65_00446 IPR036397 CF65_00446 CF65_00447 IPR014832 TnsA endonuclease C-terminal CF65_00447 IPR014833 TnsA endonuclease, N-terminal CF65_00448 IPR000523 Magnesium chelatase, ChlI subunit CF65_00448 IPR025158 Mg chelatase-related protein, C-terminal domain CF65_00448 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CF65_00448 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00449 IPR006837 Protein of unknown function DUF610, YibQ CF65_00449 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CF65_00450 IPR011055 Duplicated hybrid motif CF65_00450 IPR016047 Peptidase M23 CF65_00452 IPR005843 Alpha-D-phosphohexomutase, C-terminal CF65_00452 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CF65_00452 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CF65_00452 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CF65_00452 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CF65_00452 IPR016066 Alpha-D-phosphohexomutase, conserved site CF65_00452 IPR036900 CF65_00452 CF65_00453 IPR005952 Phosphoglycerate mutase 1 CF65_00453 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_00453 IPR029033 Histidine phosphatase superfamily CF65_00454 IPR005587 Uncharacterised protein family UPF0304, YfbU CF65_00454 IPR023145 YfbU, helix-hairpin domain CF65_00454 IPR023146 YfbU, alpha-helical bundle domain CF65_00455 IPR007428 VacJ-like lipoprotein CF65_00458 IPR000914 Bacterial extracellular solute-binding protein, family 5 CF65_00458 IPR011980 Nickel ABC transporter, periplasmic nickel-binding protein CF65_00458 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CF65_00458 IPR030678 CF65_00458 CF65_00460 IPR003593 AAA+ ATPase domain CF65_00460 IPR003959 ATPase, AAA-type, core CF65_00460 IPR004491 Heat shock protein HslU CF65_00460 IPR019489 Clp ATPase, C-terminal CF65_00460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00461 IPR001353 Proteasome, subunit alpha/beta CF65_00461 IPR022281 ATP-dependent protease, HslV subunit CF65_00461 IPR029055 Nucleophile aminohydrolases, N-terminal CF65_00463 IPR005519 Acid phosphatase (Class B) CF65_00463 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA CF65_00463 IPR023214 HAD-like domain CF65_00463 IPR036412 CF65_00463 CF65_00465 IPR025384 Protein of unknown function DUF4298 CF65_00468 IPR002293 Amino acid/polyamine transporter I CF65_00468 IPR013059 Tryptophan/tyrosine transporter CF65_00468 IPR013061 Tryptophan/tryrosine permease, conserved site CF65_00468 IPR018227 Tryptophan/tyrosine permease CF65_00469 IPR008162 Inorganic pyrophosphatase CF65_00469 IPR036649 CF65_00469 CF65_00470 IPR001915 Peptidase M48 CF65_00471 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CF65_00471 IPR017945 DHBP synthase RibB-like alpha/beta domain CF65_00473 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_00473 IPR002305 Aminoacyl-tRNA synthetase, class Ic CF65_00473 IPR002306 Tryptophan-tRNA ligase CF65_00473 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00473 IPR024109 Tryptophan-tRNA ligase, bacterial-type CF65_00474 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CF65_00474 IPR003593 AAA+ ATPase domain CF65_00474 IPR004390 Signal-recognition particle receptor FtsY CF65_00474 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle CF65_00474 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00474 IPR036225 CF65_00474 CF65_00475 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_00475 IPR004398 RNA methyltransferase, RsmD CF65_00475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00478 IPR004701 Phosphotransferase system, mannose-type IIA component CF65_00478 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CF65_00478 IPR013789 Phosphotransferase system, mannose family IIA component CF65_00478 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CF65_00478 IPR036662 CF65_00478 CF65_00478 IPR036667 CF65_00478 CF65_00479 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit CF65_00480 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CF65_00482 IPR000150 Cof protein CF65_00482 IPR006379 HAD-superfamily hydrolase, subfamily IIB CF65_00482 IPR023214 HAD-like domain CF65_00482 IPR036412 CF65_00482 CF65_00486 IPR002668 Concentrative nucleoside transporter N-terminal domain CF65_00486 IPR011642 Nucleoside recognition Gate CF65_00486 IPR011657 Concentrative nucleoside transporter C-terminal domain CF65_00486 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CF65_00488 IPR000845 Nucleoside phosphorylase domain CF65_00488 IPR004402 Purine nucleoside phosphorylase DeoD-type CF65_00488 IPR035994 CF65_00488 CF65_00490 IPR008939 Lytic transglycosylase, superhelical U-shaped CF65_00490 IPR011990 Tetratricopeptide-like helical domain CF65_00490 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA CF65_00491 IPR002509 Polysaccharide deacetylase CF65_00491 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CF65_00491 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB CF65_00491 IPR032772 CF65_00491 CF65_00492 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA CF65_00492 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00497 IPR000849 Sugar phosphate transporter CF65_00497 IPR011701 Major facilitator superfamily CF65_00497 IPR021159 Glycerate/sugar phosphate transporter, conserved site CF65_00497 IPR036259 CF65_00497 CF65_00499 IPR000659 Pyridoxamine 5'-phosphate oxidase CF65_00499 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain CF65_00499 IPR012349 FMN-binding split barrel CF65_00499 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal CF65_00499 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site CF65_00501 IPR015032 MTH538 TIR-like domain CF65_00502 IPR015032 MTH538 TIR-like domain CF65_00502 IPR035897 CF65_00502 CF65_00502 IPR036490 CF65_00502 CF65_00503 IPR011202 Bacteriophage BK5-T, Orf30 CF65_00503 IPR039444 CF65_00503 CF65_00504 IPR025420 Domain of unknown function DUF4143 CF65_00504 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00506 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CF65_00506 IPR001650 Helicase, C-terminal CF65_00506 IPR011545 DEAD/DEAH box helicase domain CF65_00506 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CF65_00506 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00506 IPR028621 ATP-dependent RNA helicase SrmB CF65_00508 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_00508 IPR007848 Methyltransferase small domain CF65_00508 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase CF65_00508 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00511 IPR006419 Nicotinamide mononucleotide transporter PnuC CF65_00513 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CF65_00513 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CF65_00513 IPR020103 Pseudouridine synthase, catalytic domain CF65_00516 IPR003815 S-ribosylhomocysteinase (LuxS) CF65_00516 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CF65_00516 IPR037005 CF65_00516 CF65_00518 IPR020143 Uncharacterised protein family, RP436 CF65_00518 IPR032816 CF65_00518 CF65_00519 IPR001451 Bacterial transferase hexapeptide repeat CF65_00519 IPR011004 Trimeric LpxA-like CF65_00519 IPR018357 Hexapeptide transferase, conserved site CF65_00519 IPR024688 Maltose/galactoside acetyltransferase CF65_00521 IPR006439 HAD hydrolase, subfamily IA CF65_00521 IPR023198 Phosphoglycolate phosphatase, domain 2 CF65_00521 IPR023214 HAD-like domain CF65_00521 IPR036412 CF65_00521 CF65_00523 IPR011608 PRD domain CF65_00523 IPR036634 CF65_00523 CF65_00527 IPR005752 DNA helicase, ATP-dependent, RepA type CF65_00527 IPR013986 DExx box DNA helicase domain CF65_00527 IPR014017 DNA helicase, UvrD-like, C-terminal CF65_00527 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00527 IPR034739 CF65_00527 CF65_00528 IPR010780 Protein of unknown function DUF1375 CF65_00529 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CF65_00529 IPR027385 Outer membrane protein beta-barrel CF65_00531 IPR001098 DNA-directed DNA polymerase, family A, palm domain CF65_00531 IPR002298 DNA polymerase A CF65_00531 IPR002421 5'-3' exonuclease, N-terminal CF65_00531 IPR002562 3'-5' exonuclease domain CF65_00531 IPR008918 Helix-hairpin-helix motif, class 2 CF65_00531 IPR012337 Ribonuclease H-like domain CF65_00531 IPR018320 DNA polymerase 1 CF65_00531 IPR019760 DNA-directed DNA polymerase, family A, conserved site CF65_00531 IPR020045 5'-3' exonuclease, C-terminal domain CF65_00531 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CF65_00531 IPR029060 PIN domain-like CF65_00531 IPR036279 CF65_00531 CF65_00531 IPR036397 CF65_00531 CF65_00535 IPR009057 Homeodomain-like CF65_00536 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CF65_00536 IPR006146 5'-Nucleotidase, conserved site CF65_00536 IPR006179 5'-Nucleotidase/apyrase CF65_00536 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN CF65_00536 IPR008334 5'-Nucleotidase, C-terminal CF65_00536 IPR029052 Metallo-dependent phosphatase-like CF65_00536 IPR036907 CF65_00536 CF65_00539 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CF65_00539 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase CF65_00539 IPR036291 CF65_00539 CF65_00541 IPR003812 Fido domain CF65_00541 IPR025230 Domain of unknown function DUF4172 CF65_00541 IPR036597 CF65_00541 CF65_00543 IPR002201 Glycosyl transferase, family 9 CF65_00543 IPR011910 Lipopolysaccharide heptosyltransferase II CF65_00544 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CF65_00544 IPR007921 CHAP domain CF65_00544 IPR038765 CF65_00544 CF65_00545 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CF65_00545 IPR016185 Pre-ATP-grasp domain CF65_00546 IPR005126 NapC/NirT cytochrome c, N-terminal CF65_00546 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT CF65_00546 IPR024717 Denitrification system component NapC/NirT/NrfH CF65_00546 IPR036280 CF65_00546 CF65_00546 IPR038266 CF65_00546 CF65_00547 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CF65_00547 IPR036280 CF65_00547 CF65_00549 IPR011886 Ferredoxin-type protein, NapH/MauN family CF65_00549 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00549 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_00550 IPR004494 MauM/NapG ferredoxin-type protein CF65_00550 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00550 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_00552 IPR006656 Molybdopterin oxidoreductase CF65_00552 IPR006657 Molydopterin dinucleotide-binding domain CF65_00552 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CF65_00552 IPR009010 Aspartate decarboxylase-like domain CF65_00552 IPR010051 Periplasmic nitrate reductase, large subunit CF65_00552 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CF65_00552 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CF65_00553 IPR005623 Chaperone NapD, nitrate reductase assembly CF65_00557 IPR003594 Histidine kinase-like ATPase, C-terminal domain CF65_00557 IPR003660 HAMP linker domain CF65_00557 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CF65_00557 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing CF65_00557 IPR029095 NarX-like, N-terminal CF65_00557 IPR036890 CF65_00557 CF65_00558 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CF65_00558 IPR006094 FAD linked oxidase, N-terminal CF65_00558 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CF65_00558 IPR016167 FAD-binding, type 2, subdomain 1 CF65_00558 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CF65_00558 IPR036318 CF65_00558 CF65_00558 IPR036635 CF65_00558 CF65_00559 IPR016755 Uncharacterised conserved protein UCP019302 CF65_00560 IPR000943 RNA polymerase sigma-70 CF65_00560 IPR007627 RNA polymerase sigma-70 region 2 CF65_00560 IPR007630 RNA polymerase sigma-70 region 4 CF65_00560 IPR009042 RNA polymerase sigma-70 region 1.2 CF65_00560 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria CF65_00560 IPR013324 RNA polymerase sigma factor, region 3/4 CF65_00560 IPR013325 RNA polymerase sigma factor, region 2 CF65_00560 IPR014284 RNA polymerase sigma-70 like domain CF65_00561 IPR007076 TfoX, N-terminal CF65_00561 IPR007077 TfoX, C-terminal CF65_00561 IPR026256 Transcriptional regulator, TfoX/Sxy-type CF65_00563 IPR000795 Elongation factor, GTP-binding domain CF65_00563 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CF65_00563 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CF65_00563 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CF65_00563 IPR005225 Small GTP-binding protein domain CF65_00563 IPR009000 Translation protein, beta-barrel domain CF65_00563 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CF65_00563 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00563 IPR031157 CF65_00563 CF65_00564 IPR000640 Translation elongation factor EFG, V domain CF65_00564 IPR000795 Elongation factor, GTP-binding domain CF65_00564 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CF65_00564 IPR004540 Translation elongation factor EFG/EF2 CF65_00564 IPR005225 Small GTP-binding protein domain CF65_00564 IPR005517 Translation elongation factor EFG/EF2, domain IV CF65_00564 IPR009000 Translation protein, beta-barrel domain CF65_00564 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00564 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00564 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00564 IPR031157 CF65_00564 CF65_00564 IPR035647 CF65_00564 CF65_00565 IPR000235 Ribosomal protein S5/S7 CF65_00565 IPR005717 Ribosomal protein S7, bacterial/organellar-type CF65_00565 IPR020606 Ribosomal protein S7, conserved site CF65_00565 IPR023798 Ribosomal protein S7 domain CF65_00565 IPR036823 CF65_00565 CF65_00566 IPR005679 Ribosomal protein S12, bacteria CF65_00566 IPR006032 Ribosomal protein S12/S23 CF65_00566 IPR012340 Nucleic acid-binding, OB-fold CF65_00569 IPR000506 Acetohydroxy acid isomeroreductase C-terminal CF65_00569 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CF65_00569 IPR013328 Dehydrogenase, multihelical CF65_00573 IPR000620 Drug/metabolite transporter CF65_00573 IPR004626 RarD protein CF65_00575 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CF65_00575 IPR011342 Shikimate dehydrogenase CF65_00575 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CF65_00575 IPR022893 Shikimate, quinate/shikimate dehydrogenase CF65_00575 IPR036291 CF65_00575 CF65_00576 IPR006070 YrdC-like domain CF65_00576 IPR017945 DHBP synthase RibB-like alpha/beta domain CF65_00576 IPR023535 Threonylcarbamoyl-AMP synthase CF65_00578 IPR013498 DNA topoisomerase, type IA, zn finger CF65_00579 IPR003798 DNA recombination RmuC CF65_00580 IPR005134 Uncharacterised protein family UPF0114 CF65_00580 IPR020761 Uncharacterised protein family UPF0114, bacteria CF65_00581 IPR001763 Rhodanese-like domain CF65_00581 IPR036873 CF65_00581 CF65_00582 IPR035333 CF65_00582 CF65_00583 IPR022764 Peptidase S54, rhomboid domain CF65_00583 IPR035952 CF65_00583 CF65_00585 IPR001034 HTH DeoR N-terminal domain CF65_00585 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CF65_00585 IPR036388 CF65_00585 CF65_00585 IPR036390 CF65_00585 CF65_00585 IPR037171 CF65_00585 CF65_00586 IPR014036 DeoR C-terminal sensor domain CF65_00586 IPR037171 CF65_00586 CF65_00590 IPR000531 TonB-dependent receptor, beta-barrel CF65_00590 IPR010917 TonB-dependent receptor, conserved site CF65_00590 IPR012910 TonB-dependent receptor, plug CF65_00590 IPR037066 CF65_00590 CF65_00591 IPR003439 ABC transporter-like CF65_00591 IPR003593 AAA+ ATPase domain CF65_00591 IPR011527 ABC transporter type 1, transmembrane domain CF65_00591 IPR017871 ABC transporter, conserved site CF65_00591 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CF65_00591 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00591 IPR036640 CF65_00591 CF65_00592 IPR006037 Regulator of K+ conductance, C-terminal CF65_00592 IPR006512 YidE/YbjL duplication CF65_00592 IPR023018 Transport protein YidE, putative CF65_00592 IPR036721 CF65_00592 CF65_00596 IPR001048 Aspartate/glutamate/uridylate kinase CF65_00596 IPR011817 Uridylate kinase CF65_00596 IPR015963 Uridylate kinase, bacteria CF65_00596 IPR036393 CF65_00596 CF65_00600 IPR002661 Ribosome recycling factor CF65_00600 IPR023584 Ribosome recycling factor domain CF65_00600 IPR036191 CF65_00600 CF65_00602 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CF65_00602 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CF65_00602 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CF65_00602 IPR026877 DXP reductoisomerase C-terminal domain CF65_00602 IPR036169 CF65_00602 CF65_00602 IPR036291 CF65_00602 CF65_00603 IPR001441 Decaprenyl diphosphate synthase-like CF65_00603 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CF65_00603 IPR036424 CF65_00603 CF65_00605 IPR000374 Phosphatidate cytidylyltransferase CF65_00606 IPR001478 PDZ domain CF65_00606 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CF65_00606 IPR008915 Peptidase M50 CF65_00606 IPR036034 CF65_00606 CF65_00608 IPR000184 Bacterial surface antigen (D15) CF65_00608 IPR010827 Surface antigen variable number CF65_00608 IPR023707 Outer membrane protein assembly factor BamA CF65_00609 IPR005632 Chaperone protein Skp CF65_00609 IPR024930 Skp domain CF65_00610 IPR001451 Bacterial transferase hexapeptide repeat CF65_00610 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CF65_00610 IPR011004 Trimeric LpxA-like CF65_00610 IPR018357 Hexapeptide transferase, conserved site CF65_00610 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CF65_00611 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CF65_00611 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CF65_00611 IPR029069 HotDog domain CF65_00612 IPR001451 Bacterial transferase hexapeptide repeat CF65_00612 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CF65_00612 IPR011004 Trimeric LpxA-like CF65_00612 IPR018357 Hexapeptide transferase, conserved site CF65_00612 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal CF65_00612 IPR037157 CF65_00612 CF65_00613 IPR003835 Glycosyl transferase, family 19 CF65_00614 IPR012337 Ribonuclease H-like domain CF65_00614 IPR022898 Ribonuclease HII CF65_00614 IPR024567 Ribonuclease HII/HIII domain CF65_00614 IPR036397 CF65_00614 CF65_00615 IPR004680 Citrate transporter-like domain CF65_00615 IPR006037 Regulator of K+ conductance, C-terminal CF65_00615 IPR036721 CF65_00615 CF65_00616 IPR000374 Phosphatidate cytidylyltransferase CF65_00618 IPR001453 Molybdopterin binding domain CF65_00618 IPR008284 Molybdenum cofactor biosynthesis, conserved site CF65_00618 IPR036425 CF65_00618 CF65_00625 IPR008816 Glycine zipper 2TM domain CF65_00628 IPR003142 Biotin protein ligase, C-terminal CF65_00628 IPR004143 Biotin/lipoate A/B protein ligase CF65_00628 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CF65_00628 IPR008988 Transcriptional repressor, C-terminal CF65_00629 IPR000644 CBS domain CF65_00629 IPR001093 IMP dehydrogenase/GMP reductase CF65_00629 IPR005990 Inosine-5'-monophosphate dehydrogenase CF65_00629 IPR013785 Aldolase-type TIM barrel CF65_00629 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CF65_00632 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_00632 IPR036286 CF65_00632 CF65_00634 IPR017961 DNA polymerase, Y-family, little finger domain CF65_00634 IPR024728 DNA polymerase type-Y, HhH motif CF65_00634 IPR036775 CF65_00634 CF65_00635 IPR000489 Pterin-binding CF65_00635 IPR006390 Dihydropteroate synthase CF65_00635 IPR011005 Dihydropteroate synthase-like CF65_00636 IPR005841 Alpha-D-phosphohexomutase superfamily CF65_00636 IPR005843 Alpha-D-phosphohexomutase, C-terminal CF65_00636 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CF65_00636 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CF65_00636 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CF65_00636 IPR006352 Phosphoglucosamine mutase CF65_00636 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CF65_00636 IPR016066 Alpha-D-phosphohexomutase, conserved site CF65_00636 IPR036900 CF65_00636 CF65_00637 IPR004449 Phosphohistidine phosphatase SixA, subgroup CF65_00637 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_00637 IPR029033 Histidine phosphatase superfamily CF65_00641 IPR005526 Septum formation inhibitor MinC, C-terminal CF65_00641 IPR007874 Septum formation inhibitor MinC, N-terminal CF65_00641 IPR013033 Septum formation inhibitor MinC CF65_00641 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CF65_00641 IPR036145 CF65_00641 CF65_00641 IPR038061 CF65_00641 CF65_00642 IPR027354 YcgL domain CF65_00642 IPR038068 CF65_00642 CF65_00644 IPR000064 Endopeptidase, NLPC/P60 domain CF65_00644 IPR038765 CF65_00644 CF65_00646 IPR006218 DAHP synthetase I/KDSA CF65_00646 IPR006269 3-deoxy-8-phosphooctulonate synthase CF65_00646 IPR013785 Aldolase-type TIM barrel CF65_00647 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_00647 IPR004556 Modification methylase HemK CF65_00647 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CF65_00647 IPR025714 Methyltransferase domain CF65_00647 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00649 IPR000352 Peptide chain release factor class I/class II CF65_00649 IPR004373 Peptide chain release factor 1 CF65_00649 IPR005139 Peptide chain release factor CF65_00650 IPR008816 Glycine zipper 2TM domain CF65_00651 IPR010393 Protein of unknown function DUF991 CF65_00651 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CF65_00652 IPR001278 Arginine-tRNA ligase CF65_00652 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_00652 IPR005148 Arginyl tRNA synthetase N-terminal domain CF65_00652 IPR008909 DALR anticodon binding CF65_00652 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CF65_00652 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00652 IPR035684 CF65_00652 CF65_00652 IPR036695 CF65_00652 CF65_00654 IPR010352 Protein of unknown function DUF945 CF65_00657 IPR012725 Chaperone DnaK CF65_00657 IPR013126 Heat shock protein 70 family CF65_00657 IPR018181 Heat shock protein 70, conserved site CF65_00657 IPR029047 Heat shock protein 70kD, peptide-binding domain CF65_00657 IPR029048 Heat shock protein 70kD, C-terminal domain CF65_00659 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CF65_00659 IPR001623 DnaJ domain CF65_00659 IPR002939 Chaperone DnaJ, C-terminal CF65_00659 IPR008971 HSP40/DnaJ peptide-binding CF65_00659 IPR012724 Chaperone DnaJ CF65_00659 IPR018253 DnaJ domain, conserved site CF65_00659 IPR036410 CF65_00659 CF65_00659 IPR036869 CF65_00659 CF65_00660 IPR007159 AbrB-like domain CF65_00660 IPR037914 CF65_00660 CF65_00661 IPR001897 Porin, gammaproteobacterial CF65_00661 IPR023614 Porin domain CF65_00662 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CF65_00662 IPR006233 Cystathionine beta-lyase, bacterial CF65_00662 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_00662 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_00662 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00663 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CF65_00663 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_00663 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00664 IPR000462 CDP-alcohol phosphatidyltransferase CF65_00664 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CF65_00665 IPR025669 AAA domain CF65_00665 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00667 IPR003558 Cytolethal distending toxin A/C CF65_00667 IPR035992 CF65_00667 CF65_00668 IPR003539 Cytolethal distending toxin B CF65_00668 IPR005135 Endonuclease/exonuclease/phosphatase CF65_00668 IPR036691 CF65_00668 CF65_00669 IPR003558 Cytolethal distending toxin A/C CF65_00669 IPR015957 Cytolethal distending toxin A CF65_00669 IPR035992 CF65_00669 CF65_00671 IPR007159 AbrB-like domain CF65_00671 IPR037914 CF65_00671 CF65_00672 IPR003477 mRNA interferase PemK-like protein CF65_00672 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CF65_00674 IPR003000 Sirtuin family CF65_00674 IPR026591 Sirtuin family, catalytic core small domain CF65_00674 IPR027546 Sirtuin, class III CF65_00674 IPR029035 DHS-like NAD/FAD-binding domain CF65_00675 IPR004045 Glutathione S-transferase, N-terminal CF65_00675 IPR007494 Glutaredoxin 2, C-terminal CF65_00675 IPR011767 Glutaredoxin active site CF65_00675 IPR011901 Glutaredoxin, GrxB CF65_00675 IPR036249 CF65_00675 CF65_00675 IPR036282 CF65_00675 CF65_00679 IPR003029 Ribosomal protein S1, RNA-binding domain CF65_00679 IPR004659 Ribonuclease E/G CF65_00679 IPR012340 Nucleic acid-binding, OB-fold CF65_00679 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CF65_00679 IPR022967 RNA-binding domain, S1 CF65_00680 IPR001734 Sodium/solute symporter CF65_00680 IPR011851 Sodium/proline symporter CF65_00680 IPR018212 Sodium/solute symporter, conserved site CF65_00680 IPR038377 CF65_00680 CF65_00682 IPR010017 tRNA (mo5U34)-methyltransferase CF65_00682 IPR027555 tRNA (mo5U34)-methyltransferase-like CF65_00682 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00684 IPR001114 Adenylosuccinate synthetase CF65_00684 IPR018220 Adenylosuccinate synthase, active site CF65_00684 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00684 IPR033128 CF65_00684 CF65_00688 IPR001623 DnaJ domain CF65_00688 IPR002939 Chaperone DnaJ, C-terminal CF65_00688 IPR008971 HSP40/DnaJ peptide-binding CF65_00688 IPR036869 CF65_00688 CF65_00689 IPR003593 AAA+ ATPase domain CF65_00689 IPR005225 Small GTP-binding protein domain CF65_00689 IPR006073 GTP binding domain CF65_00689 IPR015946 K homology domain-like, alpha/beta CF65_00689 IPR016484 GTP-binding protein EngA CF65_00689 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00689 IPR032859 CF65_00689 CF65_00691 IPR011701 Major facilitator superfamily CF65_00691 IPR036259 CF65_00691 CF65_00692 IPR032712 CF65_00692 CF65_00694 IPR010550 Deoxycytidine triphosphate deaminase, bacterial CF65_00694 IPR011962 Deoxycytidine triphosphate deaminase CF65_00694 IPR036157 CF65_00694 CF65_00695 IPR000764 Uridine kinase like CF65_00695 IPR006083 Phosphoribulokinase/uridine kinase CF65_00695 IPR026008 Uridine kinase CF65_00695 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00696 IPR026045 Ferric binding protein CF65_00698 IPR026045 Ferric binding protein CF65_00699 IPR000515 MetI-like domain CF65_00699 IPR035906 CF65_00699 CF65_00700 IPR003439 ABC transporter-like CF65_00700 IPR003593 AAA+ ATPase domain CF65_00700 IPR008995 Molybdate/tungstate binding, C-terminal CF65_00700 IPR013611 Transport-associated OB, type 2 CF65_00700 IPR017871 ABC transporter, conserved site CF65_00700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00705 IPR000760 Inositol monophosphatase CF65_00705 IPR020550 Inositol monophosphatase, conserved site CF65_00705 IPR020583 Inositol monophosphatase, metal-binding site CF65_00705 IPR022337 Inositol monophosphatase, SuhB CF65_00706 IPR001537 tRNA/rRNA methyltransferase, SpoU type CF65_00706 IPR004384 RNA methyltransferase TrmH, group 1 CF65_00706 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_00706 IPR029028 Alpha/beta knot methyltransferases CF65_00707 IPR000944 Transcription regulator Rrf2-like CF65_00707 IPR010242 Transcription factor HTH, IscR CF65_00707 IPR036388 CF65_00707 CF65_00707 IPR036390 CF65_00707 CF65_00708 IPR000192 Aminotransferase class V domain CF65_00708 IPR010240 Cysteine desulfurase CF65_00708 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_00708 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_00708 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00708 IPR016454 Cysteine desulfurase, NifS CF65_00708 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site CF65_00709 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CF65_00709 IPR011339 ISC system FeS cluster assembly, IscU scaffold CF65_00711 IPR000361 FeS cluster biogenesis CF65_00711 IPR011302 ISC system FeS cluster assembly, IscA scaffold CF65_00711 IPR016092 FeS cluster insertion protein CF65_00711 IPR017870 FeS cluster insertion, C-terminal, conserved site CF65_00711 IPR035903 CF65_00711 CF65_00712 IPR001623 DnaJ domain CF65_00712 IPR004640 Co-chaperone Hsc20 CF65_00712 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain CF65_00712 IPR036386 CF65_00712 CF65_00712 IPR036869 CF65_00712 CF65_00713 IPR010236 ISC system FeS cluster assembly, HscA chaperone CF65_00713 IPR013126 Heat shock protein 70 family CF65_00713 IPR018181 Heat shock protein 70, conserved site CF65_00713 IPR029047 Heat shock protein 70kD, peptide-binding domain CF65_00713 IPR029048 Heat shock protein 70kD, C-terminal domain CF65_00715 IPR001041 2Fe-2S ferredoxin-type domain CF65_00715 IPR001055 Adrenodoxin CF65_00715 IPR011536 Ferredoxin, 2Fe-2S type CF65_00715 IPR012675 Beta-grasp domain CF65_00715 IPR018298 Adrenodoxin, iron-sulphur binding site CF65_00715 IPR036010 CF65_00715 CF65_00716 IPR007479 ISC system FeS cluster assembly, IscX CF65_00716 IPR036762 CF65_00716 CF65_00717 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_00717 IPR002547 tRNA-binding domain CF65_00717 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal CF65_00717 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CF65_00717 IPR012340 Nucleic acid-binding, OB-fold CF65_00717 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00717 IPR014758 Methionyl-tRNA synthetase CF65_00717 IPR015413 Methionyl/Leucyl tRNA synthetase CF65_00717 IPR023458 Methionine-tRNA ligase, type 1 CF65_00717 IPR029038 Methionyl-tRNA synthetase, Zn-domain CF65_00717 IPR033911 CF65_00717 CF65_00718 IPR000808 Mrp, conserved site CF65_00718 IPR019591 Mrp/NBP35 ATP-binding protein CF65_00718 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00718 IPR033756 CF65_00718 CF65_00718 IPR034904 CF65_00718 CF65_00721 IPR015883 Glycoside hydrolase family 20, catalytic core CF65_00721 IPR017853 Glycoside hydrolase, superfamily CF65_00721 IPR025705 Beta-hexosaminidase CF65_00722 IPR001564 Nucleoside diphosphate kinase CF65_00722 IPR023005 Nucleoside diphosphate kinase, active site CF65_00722 IPR034907 CF65_00722 CF65_00722 IPR036850 CF65_00722 CF65_00723 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CF65_00723 IPR008330 Peptidase M17, peptidase B CF65_00723 IPR011356 Leucine aminopeptidase/peptidase B CF65_00725 IPR004368 Translation initiation factor IF-1 CF65_00725 IPR006196 RNA-binding domain, S1, IF1 type CF65_00725 IPR012340 Nucleic acid-binding, OB-fold CF65_00725 IPR022967 RNA-binding domain, S1 CF65_00726 IPR003010 Carbon-nitrogen hydrolase CF65_00726 IPR004563 Apolipoprotein N-acyltransferase CF65_00726 IPR036526 CF65_00726 CF65_00729 IPR000644 CBS domain CF65_00729 IPR005170 Transporter-associated domain CF65_00729 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CF65_00729 IPR036318 CF65_00729 CF65_00732 IPR004821 Cytidyltransferase-like domain CF65_00732 IPR005216 Citrate lyase ligase CF65_00732 IPR013166 Citrate lyase ligase, C-terminal CF65_00732 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00732 IPR016181 Acyl-CoA N-acyltransferase CF65_00734 IPR006495 Citrate lyase acyl carrier protein CitD CF65_00734 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CF65_00735 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CF65_00735 IPR006475 Citrate lyase, beta subunit, bacteria CF65_00735 IPR011206 Citrate lyase beta subunit-like CF65_00735 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CF65_00737 IPR006472 Citrate lyase, alpha subunit CF65_00737 IPR037171 CF65_00737 CF65_00740 IPR002736 Triphosphoribosyl-dephospho-CoA protein CF65_00740 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CF65_00740 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG CF65_00741 IPR001898 Sodium/sulphate symporter CF65_00741 IPR030676 CF65_00741 CF65_00743 IPR003752 Disulphide bond formation protein DsbB/BdbC CF65_00743 IPR023380 Disulphide bond formation protein DsbB-like domain CF65_00744 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CF65_00744 IPR011013 Galactose mutarotase-like domain CF65_00744 IPR013458 Aldose 1-epimerase, bacterial CF65_00744 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CF65_00744 IPR015443 Aldose 1-epimerase CF65_00744 IPR018052 Aldose 1-epimerase, conserved site CF65_00745 IPR000705 Galactokinase CF65_00745 IPR006203 GHMP kinase, ATP-binding, conserved site CF65_00745 IPR006204 GHMP kinase N-terminal domain CF65_00745 IPR006206 Mevalonate/galactokinase CF65_00745 IPR013750 GHMP kinase, C-terminal domain CF65_00745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00745 IPR019539 Galactokinase galactose-binding domain CF65_00745 IPR019741 Galactokinase, conserved site CF65_00745 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00745 IPR022963 Galactokinase, bacterial CF65_00745 IPR036554 CF65_00745 CF65_00747 IPR001937 Galactose-1-phosphate uridyl transferase, class I CF65_00747 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal CF65_00747 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal CF65_00747 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site CF65_00747 IPR036265 CF65_00747 CF65_00749 IPR000843 Transcription regulator HTH, LacI CF65_00749 IPR028082 Periplasmic binding protein-like I CF65_00750 IPR025997 Periplasmic binding protein domain CF65_00750 IPR028082 Periplasmic binding protein-like I CF65_00751 IPR003439 ABC transporter-like CF65_00751 IPR003593 AAA+ ATPase domain CF65_00751 IPR017871 ABC transporter, conserved site CF65_00751 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00753 IPR001851 ABC transporter, permease CF65_00757 IPR001789 Signal transduction response regulator, receiver domain CF65_00757 IPR003594 Histidine kinase-like ATPase, C-terminal domain CF65_00757 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CF65_00757 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CF65_00757 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CF65_00757 IPR011006 CheY-like superfamily CF65_00757 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB CF65_00757 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain CF65_00757 IPR036097 CF65_00757 CF65_00757 IPR036641 CF65_00757 CF65_00757 IPR036890 CF65_00757 CF65_00759 IPR014030 Beta-ketoacyl synthase, N-terminal CF65_00759 IPR014031 Beta-ketoacyl synthase, C-terminal CF65_00759 IPR016039 Thiolase-like CF65_00759 IPR018201 Beta-ketoacyl synthase, active site CF65_00759 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CF65_00760 IPR006076 FAD dependent oxidoreductase CF65_00760 IPR008471 MnmC-like methyltransferase CF65_00760 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal CF65_00760 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC CF65_00760 IPR036188 CF65_00760 CF65_00761 IPR036188 CF65_00761 CF65_00762 IPR012910 TonB-dependent receptor, plug CF65_00762 IPR036942 CF65_00762 CF65_00762 IPR037066 CF65_00762 CF65_00763 IPR000531 TonB-dependent receptor, beta-barrel CF65_00763 IPR036942 CF65_00763 CF65_00764 IPR000531 TonB-dependent receptor, beta-barrel CF65_00764 IPR010917 TonB-dependent receptor, conserved site CF65_00764 IPR036942 CF65_00764 CF65_00766 IPR000740 GrpE nucleotide exchange factor CF65_00766 IPR009012 GrpE nucleotide exchange factor, head CF65_00766 IPR013805 GrpE nucleotide exchange factor, coiled-coil CF65_00768 IPR002504 Inorganic polyphosphate/ATP-NAD kinase CF65_00768 IPR016064 ATP-NAD kinase-like domain CF65_00768 IPR017437 ATP-NAD kinase, PpnK-type, all-beta CF65_00768 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 CF65_00769 IPR003395 RecF/RecN/SMC, N-terminal CF65_00769 IPR004604 DNA recombination/repair protein RecN CF65_00769 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00770 IPR005618 Outer membrane protein, OmpW CF65_00770 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CF65_00774 IPR006008 Intracellular septation protein A CF65_00775 IPR006683 Thioesterase superfamily CF65_00775 IPR029069 HotDog domain CF65_00776 IPR005545 YCII-related CF65_00776 IPR011008 Dimeric alpha-beta barrel CF65_00777 IPR000189 Prokaryotic transglycosylase, active site CF65_00777 IPR008258 Lytic transglycosylase-like SLT domain CF65_00777 IPR008939 Lytic transglycosylase, superhelical U-shaped CF65_00777 IPR012289 Lytic transglycosylase, superhelical linker CF65_00777 IPR023346 Lysozyme-like domain CF65_00777 IPR037061 CF65_00777 CF65_00778 IPR000831 Trp repressor CF65_00778 IPR010921 Trp repressor/replication initiator CF65_00778 IPR013335 Trp repressor, bacterial CF65_00778 IPR038116 CF65_00778 CF65_00780 IPR001264 Glycosyl transferase, family 51 CF65_00780 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase CF65_00780 IPR023346 Lysozyme-like domain CF65_00780 IPR036950 CF65_00780 CF65_00785 IPR038488 CF65_00785 CF65_00786 IPR004692 Preprotein translocase SecG subunit CF65_00789 IPR003601 DNA topoisomerase, type IA, domain 2 CF65_00789 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CF65_00789 IPR005738 DNA topoisomerase III CF65_00789 IPR006171 Toprim domain CF65_00789 IPR013497 DNA topoisomerase, type IA, central CF65_00789 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CF65_00789 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CF65_00789 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CF65_00789 IPR023405 DNA topoisomerase, type IA, core domain CF65_00789 IPR023406 DNA topoisomerase, type IA, active site CF65_00790 IPR000093 DNA recombination protein RecR CF65_00790 IPR006171 Toprim domain CF65_00790 IPR015967 Recombination protein RecR, conserved site CF65_00790 IPR023627 Recombination protein RecR CF65_00790 IPR023628 Recombination protein RecR, C4-type zinc finger CF65_00792 IPR004401 Nucleoid-associated protein YbaB CF65_00792 IPR036894 CF65_00792 CF65_00794 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CF65_00794 IPR029052 Metallo-dependent phosphatase-like CF65_00795 IPR002491 ABC transporter periplasmic binding domain CF65_00796 IPR000522 ABC transporter, permease protein CF65_00796 IPR037294 CF65_00796 CF65_00798 IPR000522 ABC transporter, permease protein CF65_00798 IPR037294 CF65_00798 CF65_00799 IPR003439 ABC transporter-like CF65_00799 IPR003593 AAA+ ATPase domain CF65_00799 IPR017871 ABC transporter, conserved site CF65_00799 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00801 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CF65_00801 IPR004525 Elongation factor P--(R)-beta-lysine ligase CF65_00801 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CF65_00804 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CF65_00804 IPR003953 FAD binding domain CF65_00804 IPR005884 Fumarate reductase, flavoprotein subunit CF65_00804 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CF65_00804 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CF65_00804 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CF65_00804 IPR036188 CF65_00804 CF65_00804 IPR037099 CF65_00804 CF65_00805 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CF65_00805 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CF65_00805 IPR009051 Alpha-helical ferredoxin CF65_00805 IPR012675 Beta-grasp domain CF65_00805 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00805 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_00805 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CF65_00805 IPR036010 CF65_00805 CF65_00806 IPR003510 Fumarate reductase, subunit C CF65_00806 IPR034804 CF65_00806 CF65_00807 IPR003418 Fumarate reductase, D subunit CF65_00807 IPR034804 CF65_00807 CF65_00809 IPR000241 Putative RNA methylase domain CF65_00809 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_00809 IPR004114 THUMP CF65_00809 IPR017244 Ribosomal RNA large subunit methyltransferase K/L CF65_00809 IPR019614 S-adenosylmethionine-dependent methyltransferase CF65_00809 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00810 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CF65_00810 IPR011032 GroES (chaperonin 10)-like CF65_00810 IPR013149 Alcohol dehydrogenase, C-terminal CF65_00810 IPR013154 Alcohol dehydrogenase GroES-like CF65_00810 IPR020843 Polyketide synthase, enoylreductase CF65_00810 IPR036291 CF65_00810 CF65_00811 IPR011335 Restriction endonuclease type II-like CF65_00811 IPR025420 Domain of unknown function DUF4143 CF65_00811 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00812 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00812 IPR018317 Queuosine biosynthesis protein QueC CF65_00815 IPR014942 Protein of unknown function DUF1814 CF65_00816 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CF65_00816 IPR013622 Calcineurin-like phosphoesterase C-terminal CF65_00816 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA CF65_00816 IPR029052 Metallo-dependent phosphatase-like CF65_00817 IPR000086 NUDIX hydrolase domain CF65_00817 IPR004385 Nucleoside diphosphate pyrophosphatase CF65_00817 IPR015797 NUDIX hydrolase domain-like CF65_00817 IPR020084 NUDIX hydrolase, conserved site CF65_00819 IPR003709 Peptidase M15B/M15C CF65_00819 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CF65_00820 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CF65_00820 IPR002933 Peptidase M20 CF65_00820 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CF65_00820 IPR011650 Peptidase M20, dimerisation domain CF65_00820 IPR036264 CF65_00820 CF65_00822 IPR006504 Transcriptional regulator Spx/MgsR CF65_00822 IPR006660 Arsenate reductase-like CF65_00822 IPR036249 CF65_00822 CF65_00823 IPR001404 Heat shock protein Hsp90 family CF65_00823 IPR003594 Histidine kinase-like ATPase, C-terminal domain CF65_00823 IPR019805 Heat shock protein Hsp90, conserved site CF65_00823 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00823 IPR020575 Heat shock protein Hsp90, N-terminal CF65_00823 IPR036890 CF65_00823 CF65_00823 IPR037196 CF65_00823 CF65_00825 IPR001086 Prephenate dehydratase CF65_00825 IPR002701 Chorismate mutase CF65_00825 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CF65_00825 IPR010952 Chorismate mutase, gammaproteobacteria CF65_00825 IPR018528 Prephenate dehydratase, conserved site CF65_00825 IPR036263 CF65_00825 CF65_00825 IPR036979 CF65_00825 CF65_00826 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CF65_00826 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CF65_00826 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CF65_00826 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00827 IPR000158 Cell division protein FtsZ CF65_00827 IPR003008 Tubulin/FtsZ, GTPase domain CF65_00827 IPR008280 Tubulin/FtsZ, C-terminal CF65_00827 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CF65_00827 IPR020805 Cell division protein FtsZ, conserved site CF65_00827 IPR024757 Cell division protein FtsZ, C-terminal CF65_00827 IPR036525 CF65_00827 CF65_00827 IPR037103 CF65_00827 CF65_00830 IPR003494 SHS2 domain inserted in FtsA CF65_00830 IPR020823 Cell division protein FtsA CF65_00831 IPR005548 Cell division protein FtsQ/DivIB CF65_00831 IPR013685 Polypeptide-transport-associated, FtsQ-type CF65_00831 IPR026579 Cell division protein FtsQ CF65_00832 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CF65_00832 IPR005905 D-alanine--D-alanine ligase CF65_00832 IPR011095 D-alanine--D-alanine ligase, C-terminal CF65_00832 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CF65_00832 IPR013815 ATP-grasp fold, subdomain 1 CF65_00832 IPR016185 Pre-ATP-grasp domain CF65_00833 IPR000713 Mur ligase, N-terminal CF65_00833 IPR004101 Mur ligase, C-terminal CF65_00833 IPR005758 UDP-N-acetylmuramate-alanine ligase CF65_00833 IPR013221 Mur ligase, central CF65_00833 IPR036565 CF65_00833 CF65_00833 IPR036615 CF65_00833 CF65_00835 IPR004276 Glycosyl transferase, family 28 CF65_00835 IPR006009 N-acetylglucosaminyltransferase, MurG CF65_00835 IPR007235 Glycosyl transferase, family 28, C-terminal CF65_00837 IPR001182 Cell cycle protein FtsW/RodA CF65_00837 IPR013437 Cell division protein FtsW CF65_00837 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CF65_00838 IPR004101 Mur ligase, C-terminal CF65_00838 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CF65_00838 IPR013221 Mur ligase, central CF65_00838 IPR036565 CF65_00838 CF65_00838 IPR036615 CF65_00838 CF65_00839 IPR000715 Glycosyl transferase, family 4 CF65_00839 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CF65_00839 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CF65_00840 IPR000713 Mur ligase, N-terminal CF65_00840 IPR004101 Mur ligase, C-terminal CF65_00840 IPR005863 UDP-MurNAc-pentapeptide synthetase CF65_00840 IPR013221 Mur ligase, central CF65_00840 IPR035911 CF65_00840 CF65_00840 IPR036565 CF65_00840 CF65_00840 IPR036615 CF65_00840 CF65_00841 IPR000713 Mur ligase, N-terminal CF65_00841 IPR004101 Mur ligase, C-terminal CF65_00841 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CF65_00841 IPR013221 Mur ligase, central CF65_00841 IPR035911 CF65_00841 CF65_00841 IPR036565 CF65_00841 CF65_00841 IPR036615 CF65_00841 CF65_00844 IPR001460 Penicillin-binding protein, transpeptidase CF65_00844 IPR005311 Penicillin-binding protein, dimerisation domain CF65_00844 IPR012338 Beta-lactamase/transpeptidase-like CF65_00844 IPR036138 CF65_00844 CF65_00844 IPR037532 CF65_00844 CF65_00846 IPR011922 Cell division protein FtsL CF65_00847 IPR002903 Ribosomal RNA small subunit methyltransferase H CF65_00847 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain CF65_00847 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00849 IPR003444 MraZ CF65_00849 IPR020603 MraZ domain CF65_00849 IPR037914 CF65_00849 CF65_00849 IPR038619 CF65_00849 CF65_00851 IPR003706 Carbon starvation protein CstA CF65_00851 IPR025299 CstA C-terminal domain CF65_00854 IPR000515 MetI-like domain CF65_00854 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CF65_00854 IPR035906 CF65_00854 CF65_00855 IPR000515 MetI-like domain CF65_00855 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CF65_00855 IPR035906 CF65_00855 CF65_00856 IPR001320 Ionotropic glutamate receptor CF65_00856 IPR001638 Extracellular solute-binding protein, family 3 CF65_00856 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein CF65_00856 IPR018313 Extracellular solute-binding protein, family 3, conserved site CF65_00858 IPR003439 ABC transporter-like CF65_00858 IPR003593 AAA+ ATPase domain CF65_00858 IPR017871 ABC transporter, conserved site CF65_00858 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00858 IPR030679 CF65_00858 CF65_00860 IPR001347 Sugar isomerase (SIS) CF65_00860 IPR004515 Phosphoheptose isomerase CF65_00861 IPR001650 Helicase, C-terminal CF65_00861 IPR003711 CarD-like/TRCF domain CF65_00861 IPR004576 Transcription-repair coupling factor CF65_00861 IPR005118 Transcription-repair-coupling factor, C-terminal domain CF65_00861 IPR011545 DEAD/DEAH box helicase domain CF65_00861 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CF65_00861 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00861 IPR036101 CF65_00861 CF65_00861 IPR037235 CF65_00861 CF65_00862 IPR035292 CF65_00862 CF65_00863 IPR000182 GNAT domain CF65_00863 IPR007807 Helicase domain CF65_00863 IPR013562 Domain of unknown function DUF1726 CF65_00863 IPR016181 Acyl-CoA N-acyltransferase CF65_00863 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA CF65_00863 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00863 IPR033442 CF65_00863 CF65_00863 IPR038321 CF65_00863 CF65_00864 IPR035279 CF65_00864 CF65_00865 IPR002036 Endoribonuclease YbeY CF65_00865 IPR020549 Endoribonuclease YbeY, conserved site CF65_00865 IPR023091 Metalloprotease catalytic domain, predicted CF65_00867 IPR007047 Flp/Fap pilin component CF65_00868 IPR007047 Flp/Fap pilin component CF65_00869 IPR000045 Prepilin type IV endopeptidase, peptidase domain CF65_00871 IPR001775 GspD/PilQ family CF65_00871 IPR004846 Type II/III secretion system CF65_00871 IPR032789 CF65_00871 CF65_00872 IPR031579 CF65_00872 CF65_00873 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00874 IPR001482 Type II secretion system protein E CF65_00874 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00875 IPR018076 Type II secretion system F domain CF65_00876 IPR018076 Type II secretion system F domain CF65_00877 IPR011990 Tetratricopeptide-like helical domain CF65_00878 IPR012495 TadE-like CF65_00879 IPR031582 CF65_00879 CF65_00880 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal CF65_00880 IPR036465 CF65_00880 CF65_00883 IPR031596 CF65_00883 CF65_00884 IPR000175 Sodium:neurotransmitter symporter CF65_00884 IPR037272 CF65_00884 CF65_00885 IPR020103 Pseudouridine synthase, catalytic domain CF65_00890 IPR021729 Domain of unknown function DUF3298 CF65_00890 IPR037126 CF65_00890 CF65_00892 IPR000795 Elongation factor, GTP-binding domain CF65_00892 IPR004535 Translation elongation factor, selenocysteine-specific CF65_00892 IPR005225 Small GTP-binding protein domain CF65_00892 IPR009000 Translation protein, beta-barrel domain CF65_00892 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CF65_00892 IPR015190 Translation elongation factor SelB, winged helix, type 2 CF65_00892 IPR015191 Translation elongation factor SelB, winged helix, type 3 CF65_00892 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00892 IPR036388 CF65_00892 CF65_00892 IPR036390 CF65_00892 CF65_00894 IPR004534 L-seryl-tRNA selenium transferase CF65_00894 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_00894 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00894 IPR018319 L-seryl-tRNA selenium transferase-like CF65_00894 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain CF65_00896 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CF65_00896 IPR002316 Proline-tRNA ligase, class IIa CF65_00896 IPR004154 Anticodon-binding CF65_00896 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CF65_00896 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CF65_00896 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CF65_00896 IPR036621 CF65_00896 CF65_00896 IPR036754 CF65_00896 CF65_00899 IPR000390 Small multidrug resistance protein family CF65_00900 IPR005631 Flavinator of succinate dehydrogenase CF65_00900 IPR036714 CF65_00900 CF65_00902 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CF65_00902 IPR007627 RNA polymerase sigma-70 region 2 CF65_00902 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CF65_00902 IPR013324 RNA polymerase sigma factor, region 3/4 CF65_00902 IPR013325 RNA polymerase sigma factor, region 2 CF65_00902 IPR014284 RNA polymerase sigma-70 like domain CF65_00902 IPR014286 RNA polymerase sigma-70 RpoE type CF65_00902 IPR036388 CF65_00902 CF65_00904 IPR005572 Anti sigma-E protein RseA, N-terminal CF65_00904 IPR005573 Anti sigma-E protein RseA, C-terminal CF65_00904 IPR026279 Sigma-E factor negative regulatory protein RseA CF65_00904 IPR036147 CF65_00904 CF65_00906 IPR005588 MucB/RseB CF65_00906 IPR033434 CF65_00906 CF65_00906 IPR033436 CF65_00906 CF65_00906 IPR038484 CF65_00906 CF65_00908 IPR026268 Protein RseC CF65_00909 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain CF65_00909 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00912 IPR002347 Glucose/ribitol dehydrogenase CF65_00912 IPR020904 Short-chain dehydrogenase/reductase, conserved site CF65_00912 IPR036291 CF65_00912 CF65_00914 IPR001160 Peptidase M20C, Xaa-His dipeptidase CF65_00914 IPR002933 Peptidase M20 CF65_00914 IPR011650 Peptidase M20, dimerisation domain CF65_00915 IPR000836 Phosphoribosyltransferase domain CF65_00915 IPR023747 Xanthine-guanine phosphoribosyltransferase CF65_00915 IPR029057 Phosphoribosyltransferase-like CF65_00919 IPR005653 Organic solvent tolerance-like, N-terminal CF65_00919 IPR007543 Organic solvent tolerance protein, C-terminal CF65_00919 IPR020889 Lipopolysaccharide assembly, LptD CF65_00920 IPR004597 DNA-3-methyladenine glycosylase I CF65_00920 IPR005019 Methyladenine glycosylase CF65_00920 IPR011257 DNA glycosylase CF65_00921 IPR009898 Protein of unknown function DUF1440 CF65_00923 IPR000183 Ornithine/DAP/Arg decarboxylase CF65_00923 IPR002986 Diaminopimelate decarboxylase, LysA CF65_00923 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CF65_00923 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CF65_00923 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CF65_00923 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CF65_00923 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CF65_00923 IPR029066 PLP-binding barrel CF65_00926 IPR002908 Frataxin/CyaY CF65_00926 IPR020895 Frataxin conserved site CF65_00926 IPR036524 CF65_00926 CF65_00927 IPR001650 Helicase, C-terminal CF65_00927 IPR002121 HRDC domain CF65_00927 IPR004589 DNA helicase, ATP-dependent, RecQ type CF65_00927 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CF65_00927 IPR010997 HRDC-like CF65_00927 IPR011545 DEAD/DEAH box helicase domain CF65_00927 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CF65_00927 IPR018982 RQC domain CF65_00927 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00927 IPR032284 CF65_00927 CF65_00927 IPR036388 CF65_00927 CF65_00929 IPR000565 DNA topoisomerase, type IIA, subunit B CF65_00929 IPR001241 DNA topoisomerase, type IIA CF65_00929 IPR002288 DNA gyrase B subunit, C-terminal CF65_00929 IPR003594 Histidine kinase-like ATPase, C-terminal domain CF65_00929 IPR006171 Toprim domain CF65_00929 IPR011557 DNA gyrase, subunit B CF65_00929 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CF65_00929 IPR013759 DNA topoisomerase, type IIA, central domain CF65_00929 IPR013760 DNA topoisomerase, type IIA-like domain CF65_00929 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00929 IPR018522 DNA topoisomerase, type IIA, conserved site CF65_00929 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00929 IPR036890 CF65_00929 CF65_00930 IPR004566 Bacterial pantothenate kinase CF65_00930 IPR006083 Phosphoribulokinase/uridine kinase CF65_00930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00931 IPR000795 Elongation factor, GTP-binding domain CF65_00931 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CF65_00931 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CF65_00931 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CF65_00931 IPR005225 Small GTP-binding protein domain CF65_00931 IPR009000 Translation protein, beta-barrel domain CF65_00931 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CF65_00931 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00931 IPR031157 CF65_00931 CF65_00932 IPR025997 Periplasmic binding protein domain CF65_00932 IPR028082 Periplasmic binding protein-like I CF65_00933 IPR003439 ABC transporter-like CF65_00933 IPR003593 AAA+ ATPase domain CF65_00933 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00934 IPR003439 ABC transporter-like CF65_00934 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00935 IPR001851 ABC transporter, permease CF65_00936 IPR001851 ABC transporter, permease CF65_00937 IPR018484 Carbohydrate kinase, FGGY, N-terminal CF65_00938 IPR018483 Carbohydrate kinase, FGGY, conserved site CF65_00938 IPR018485 Carbohydrate kinase, FGGY, C-terminal CF65_00939 IPR003029 Ribosomal protein S1, RNA-binding domain CF65_00939 IPR006641 YqgF/RNase H-like domain CF65_00939 IPR010994 RuvA domain 2-like CF65_00939 IPR012337 Ribonuclease H-like domain CF65_00939 IPR012340 Nucleic acid-binding, OB-fold CF65_00939 IPR018974 Tex-like protein, N-terminal CF65_00939 IPR022967 RNA-binding domain, S1 CF65_00939 IPR023319 Tex-like protein, HTH domain CF65_00939 IPR023323 Tex-like domain CF65_00939 IPR032639 CF65_00939 CF65_00939 IPR037027 CF65_00939 CF65_00940 IPR000847 Transcription regulator HTH, LysR CF65_00940 IPR005119 LysR, substrate-binding CF65_00940 IPR036388 CF65_00940 CF65_00940 IPR036390 CF65_00940 CF65_00941 IPR001898 Sodium/sulphate symporter CF65_00941 IPR030676 CF65_00941 CF65_00942 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CF65_00942 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_00942 IPR029033 Histidine phosphatase superfamily CF65_00943 IPR003029 Ribosomal protein S1, RNA-binding domain CF65_00944 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CF65_00944 IPR006358 Transcription elongation factor GreB CF65_00944 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CF65_00944 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CF65_00944 IPR023459 Transcription elongation factor GreA/GreB family CF65_00944 IPR028624 Transcription elongation factor GreA/GreB CF65_00944 IPR036805 CF65_00944 CF65_00944 IPR036953 CF65_00944 CF65_00948 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CF65_00948 IPR007627 RNA polymerase sigma-70 region 2 CF65_00948 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CF65_00948 IPR013324 RNA polymerase sigma factor, region 3/4 CF65_00948 IPR013325 RNA polymerase sigma factor, region 2 CF65_00948 IPR014284 RNA polymerase sigma-70 like domain CF65_00948 IPR014289 RNA polymerase sigma-24-related CF65_00948 IPR036388 CF65_00948 CF65_00950 IPR003744 Protein of unknown function DUF165 CF65_00952 IPR005254 Heme biosynthesis-associated TPR protein CF65_00952 IPR010817 HemY, N-terminal CF65_00952 IPR011990 Tetratricopeptide-like helical domain CF65_00952 IPR016024 Armadillo-type fold CF65_00953 IPR007470 HemX CF65_00954 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase CF65_00954 IPR036108 CF65_00954 CF65_00957 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase CF65_00957 IPR022417 Porphobilinogen deaminase, N-terminal CF65_00957 IPR022418 Porphobilinogen deaminase, C-terminal CF65_00957 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CF65_00957 IPR036803 CF65_00957 CF65_00958 IPR000274 Adenylate cyclase, class-I CF65_00958 IPR024685 Adenylate cyclase class-I, N-terminal domain CF65_00958 IPR024686 Adenylate cyclase class-I, conserved site CF65_00959 IPR000792 Transcription regulator LuxR, C-terminal CF65_00959 IPR001789 Signal transduction response regulator, receiver domain CF65_00959 IPR011006 CheY-like superfamily CF65_00959 IPR016032 Signal transduction response regulator, C-terminal effector CF65_00960 IPR000184 Bacterial surface antigen (D15) CF65_00960 IPR010827 Surface antigen variable number CF65_00960 IPR035243 CF65_00960 CF65_00961 IPR007452 Protein of unknown function DUF490 CF65_00962 IPR003695 Ppx/GppA phosphatase CF65_00962 IPR022371 Exopolyphosphatase CF65_00962 IPR030673 CF65_00962 CF65_00964 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising CF65_00964 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CF65_00964 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CF65_00964 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site CF65_00969 IPR000086 NUDIX hydrolase domain CF65_00969 IPR015376 Zinc ribbon, NADH pyrophosphatase CF65_00969 IPR015797 NUDIX hydrolase domain-like CF65_00969 IPR022925 NADH pyrophosphatase NudC CF65_00970 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CF65_00970 IPR006361 Uroporphyrinogen decarboxylase HemE CF65_00970 IPR038071 CF65_00970 CF65_00971 IPR007338 Protein of unknown function DUF416 CF65_00971 IPR023381 YP001051499.1-like domain CF65_00972 IPR000119 Histone-like bacterial DNA-binding protein CF65_00972 IPR010992 Integration host factor (IHF)-like DNA-binding domain CF65_00972 IPR020816 Histone-like DNA-binding protein, conserved site CF65_00973 IPR001034 HTH DeoR N-terminal domain CF65_00973 IPR014036 DeoR C-terminal sensor domain CF65_00973 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CF65_00973 IPR036388 CF65_00973 CF65_00973 IPR036390 CF65_00973 CF65_00973 IPR037171 CF65_00973 CF65_00974 IPR001347 Sugar isomerase (SIS) CF65_00974 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CF65_00974 IPR029055 Nucleophile aminohydrolases, N-terminal CF65_00976 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain CF65_00976 IPR029058 Alpha/Beta hydrolase fold CF65_00977 IPR000847 Transcription regulator HTH, LysR CF65_00977 IPR005119 LysR, substrate-binding CF65_00977 IPR036388 CF65_00977 CF65_00977 IPR036390 CF65_00977 CF65_00978 IPR029058 Alpha/Beta hydrolase fold CF65_00979 IPR002018 Carboxylesterase, type B CF65_00979 IPR029058 Alpha/Beta hydrolase fold CF65_00980 IPR029058 Alpha/Beta hydrolase fold CF65_00981 IPR002018 Carboxylesterase, type B CF65_00981 IPR019826 Carboxylesterase type B, active site CF65_00981 IPR029058 Alpha/Beta hydrolase fold CF65_00982 IPR020471 Aldo/keto reductase subgroup CF65_00982 IPR023210 NADP-dependent oxidoreductase domain CF65_00982 IPR036812 CF65_00982 CF65_00983 IPR018170 Aldo/keto reductase, conserved site CF65_00983 IPR020471 Aldo/keto reductase subgroup CF65_00983 IPR023210 NADP-dependent oxidoreductase domain CF65_00983 IPR036812 CF65_00983 CF65_00985 IPR000847 Transcription regulator HTH, LysR CF65_00985 IPR005119 LysR, substrate-binding CF65_00985 IPR036388 CF65_00985 CF65_00985 IPR036390 CF65_00985 CF65_00987 IPR007213 Leucine carboxyl methyltransferase CF65_00987 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP CF65_00987 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_00988 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00988 IPR033186 CF65_00988 CF65_00990 IPR005302 Molybdenum cofactor sulfurase, C-terminal CF65_00990 IPR011037 Pyruvate kinase-like, insert domain CF65_00991 IPR004027 SEC-C motif CF65_00991 IPR023006 Uncharacterised protein family UPF0225 CF65_00991 IPR032710 CF65_00991 CF65_00992 IPR017039 Virulence factor BrkB CF65_00992 IPR023679 Uncharacterised protein family UPF0761, bacterial CF65_00993 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase CF65_00993 IPR023509 D-Tyr tRNAtyr deacylase-like domain CF65_00994 IPR004445 Sodium/glutamate symporter CF65_00995 IPR003594 Histidine kinase-like ATPase, C-terminal domain CF65_00995 IPR003660 HAMP linker domain CF65_00995 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CF65_00995 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CF65_00995 IPR036097 CF65_00995 CF65_00995 IPR036890 CF65_00995 CF65_00997 IPR001789 Signal transduction response regulator, receiver domain CF65_00997 IPR001867 Signal transduction response regulator, C-terminal CF65_00997 IPR011006 CheY-like superfamily CF65_00997 IPR016032 Signal transduction response regulator, C-terminal effector CF65_00997 IPR036388 CF65_00997 CF65_00998 IPR007450 Lipoprotein SmpA/OmlA CF65_00998 IPR026592 Outer membrane protein assembly factor BamE CF65_00998 IPR037873 CF65_00998 CF65_01001 IPR007358 Nucleoid-associated protein NdpA CF65_01003 IPR009857 Uncharacterised protein family UPF0352 CF65_01003 IPR023202 YejL-like domain CF65_01005 IPR000917 Sulfatase CF65_01005 IPR012159 Membrane sulfatase, HI0842-related CF65_01005 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CF65_01005 IPR017850 Alkaline-phosphatase-like, core domain CF65_01005 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain CF65_01006 IPR006680 Amidohydrolase 1 CF65_01006 IPR032466 CF65_01006 CF65_01008 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CF65_01008 IPR011551 NTP pyrophosphohydrolase MazG, bacterial CF65_01009 IPR006015 Universal stress protein A CF65_01009 IPR006016 UspA CF65_01009 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01011 IPR002318 Alanine-tRNA ligase, class IIc CF65_01011 IPR003156 DHHA1 domain CF65_01011 IPR009000 Translation protein, beta-barrel domain CF65_01011 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CF65_01011 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain CF65_01011 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain CF65_01011 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CF65_01011 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CF65_01012 IPR003751 Carbon storage regulator CF65_01012 IPR036107 CF65_01012 CF65_01013 IPR005841 Alpha-D-phosphohexomutase superfamily CF65_01013 IPR005843 Alpha-D-phosphohexomutase, C-terminal CF65_01013 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CF65_01013 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CF65_01013 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CF65_01013 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CF65_01013 IPR016066 Alpha-D-phosphohexomutase, conserved site CF65_01013 IPR036900 CF65_01013 CF65_01014 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CF65_01014 IPR005835 Nucleotidyl transferase CF65_01014 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01015 IPR002084 Methionine repressor MetJ CF65_01015 IPR010985 Ribbon-helix-helix CF65_01015 IPR023453 Methionine repressor MetJ domain CF65_01017 IPR006700 Ribosomal RNA small subunit methyltransferase E CF65_01017 IPR015947 PUA-like domain CF65_01017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_01017 IPR029028 Alpha/beta knot methyltransferases CF65_01018 IPR003774 Protein of unknown function UPF0301 CF65_01019 IPR005227 Resolvase, holliday junction-type, YqgF-like CF65_01019 IPR006641 YqgF/RNase H-like domain CF65_01019 IPR012337 Ribonuclease H-like domain CF65_01019 IPR037027 CF65_01019 CF65_01020 IPR000941 Enolase CF65_01020 IPR020809 Enolase, conserved site CF65_01020 IPR020810 Enolase, C-terminal CF65_01020 IPR020811 Enolase, N-terminal CF65_01020 IPR029017 Enolase N-terminal domain-like CF65_01020 IPR036849 CF65_01020 CF65_01022 IPR004506 tRNA-specific 2-thiouridylase CF65_01022 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01022 IPR023382 Adenine nucleotide alpha hydrolase-like domains CF65_01023 IPR007495 Protein of unknown function DUF539 CF65_01024 IPR003374 ApbE-like domain CF65_01024 IPR024932 Flavin transferase ApbE CF65_01027 IPR001041 2Fe-2S ferredoxin-type domain CF65_01027 IPR001433 Oxidoreductase FAD/NAD(P)-binding CF65_01027 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CF65_01027 IPR008333 Oxidoreductase, FAD-binding domain CF65_01027 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit CF65_01027 IPR012675 Beta-grasp domain CF65_01027 IPR017938 Riboflavin synthase-like beta-barrel CF65_01027 IPR036010 CF65_01027 CF65_01027 IPR039261 CF65_01027 CF65_01028 IPR003667 Electron transport complex, Rnf/Nqr CF65_01028 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit CF65_01029 IPR003667 Electron transport complex, Rnf/Nqr CF65_01029 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit CF65_01031 IPR007329 FMN-binding CF65_01031 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit CF65_01032 IPR004338 NADH-quinone reductase NQR2/RnfD CF65_01032 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit CF65_01033 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A CF65_01033 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal CF65_01039 IPR002634 BolA protein CF65_01039 IPR036065 CF65_01039 CF65_01040 IPR005619 Uncharacterised protein family, YajG CF65_01042 IPR000189 Prokaryotic transglycosylase, active site CF65_01042 IPR008258 Lytic transglycosylase-like SLT domain CF65_01042 IPR023346 Lysozyme-like domain CF65_01042 IPR023664 Murein transglycosylase-C CF65_01042 IPR024570 Murein transglycosylase-C, N-terminal CF65_01043 IPR007457 Fe(II) trafficking protein YggX CF65_01043 IPR036766 CF65_01043 CF65_01044 IPR003265 HhH-GPD domain CF65_01044 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CF65_01044 IPR004035 Endonuclease III, iron-sulphur binding site CF65_01044 IPR005760 A/G-specific adenine glycosylase MutY CF65_01044 IPR011257 DNA glycosylase CF65_01044 IPR015797 NUDIX hydrolase domain-like CF65_01044 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CF65_01044 IPR029119 MutY, C-terminal CF65_01045 IPR003358 tRNA (guanine-N-7) methyltransferase CF65_01045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01046 IPR007416 Protein of unknown function DUF469 CF65_01048 IPR006059 Bacterial extracellular solute-binding, family 1 CF65_01048 IPR006061 Bacterial extracellular solute-binding family 1, conserved site CF65_01048 IPR026045 Ferric binding protein CF65_01050 IPR000515 MetI-like domain CF65_01050 IPR035906 CF65_01050 CF65_01051 IPR003439 ABC transporter-like CF65_01051 IPR003593 AAA+ ATPase domain CF65_01051 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01051 IPR017871 ABC transporter, conserved site CF65_01051 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01053 IPR001269 tRNA-dihydrouridine synthase CF65_01053 IPR013785 Aldolase-type TIM barrel CF65_01054 IPR001269 tRNA-dihydrouridine synthase CF65_01054 IPR013785 Aldolase-type TIM barrel CF65_01054 IPR018517 tRNA-dihydrouridine synthase, conserved site CF65_01056 IPR001269 tRNA-dihydrouridine synthase CF65_01056 IPR013785 Aldolase-type TIM barrel CF65_01057 IPR001623 DnaJ domain CF65_01057 IPR007791 Heat shock protein DnaJ-like protein DjlA CF65_01057 IPR023749 DnaJ-like protein DjlA CF65_01057 IPR029024 TerB-like CF65_01057 IPR036869 CF65_01057 CF65_01059 IPR000836 Phosphoribosyltransferase domain CF65_01059 IPR004467 Orotate phosphoribosyl transferase domain CF65_01059 IPR023031 Orotate phosphoribosyltransferase CF65_01059 IPR029057 Phosphoribosyltransferase-like CF65_01062 IPR001247 Exoribonuclease, phosphorolytic domain 1 CF65_01062 IPR002381 Ribonuclease phosphorolytic, bacterial-type CF65_01062 IPR015847 Exoribonuclease, phosphorolytic domain 2 CF65_01062 IPR018336 Ribonuclease PH, conserved site CF65_01062 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_01062 IPR027408 PNPase/RNase PH domain CF65_01062 IPR036345 CF65_01062 CF65_01063 IPR005229 Conserved hypothetical protein CHP00255 CF65_01063 IPR013527 YicC-like, N-terminal CF65_01063 IPR013551 Domain of unknown function DUF1732 CF65_01064 IPR006222 Glycine cleavage T-protein, N-terminal CF65_01064 IPR017703 YgfZ/GcvT conserved site CF65_01064 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA CF65_01064 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CF65_01067 IPR001865 Ribosomal protein S2 CF65_01067 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CF65_01067 IPR018130 Ribosomal protein S2, conserved site CF65_01067 IPR023591 Ribosomal protein S2, flavodoxin-like domain CF65_01069 IPR001816 Translation elongation factor EFTs/EF1B CF65_01069 IPR009060 UBA-like CF65_01069 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CF65_01069 IPR018101 Translation elongation factor Ts, conserved site CF65_01069 IPR036402 CF65_01069 CF65_01070 IPR003717 Recombination protein O, RecO CF65_01070 IPR012340 Nucleic acid-binding, OB-fold CF65_01070 IPR022572 DNA replication/recombination mediator RecO, N-terminal CF65_01070 IPR037278 CF65_01070 CF65_01071 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD CF65_01071 IPR010280 (Uracil-5)-methyltransferase family CF65_01071 IPR012340 Nucleic acid-binding, OB-fold CF65_01071 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01071 IPR030390 CF65_01071 CF65_01071 IPR030391 CF65_01071 CF65_01072 IPR002912 ACT domain CF65_01072 IPR003607 HD/PDEase domain CF65_01072 IPR004095 TGS CF65_01072 IPR004811 RelA/SpoT family CF65_01072 IPR007685 RelA/SpoT CF65_01072 IPR012675 Beta-grasp domain CF65_01072 IPR012676 TGS-like CF65_01074 IPR000829 Diacylglycerol kinase, prokaryotic CF65_01074 IPR036945 CF65_01074 CF65_01077 IPR001584 Integrase, catalytic core CF65_01077 IPR012337 Ribonuclease H-like domain CF65_01078 IPR000551 MerR-type HTH domain CF65_01078 IPR009061 DNA binding domain, putative CF65_01079 IPR007922 Protein of unknown function DUF721/UPF0232 CF65_01081 IPR020508 Protein of unknown function DUF2547 CF65_01083 IPR000185 Protein translocase subunit SecA CF65_01083 IPR004027 SEC-C motif CF65_01083 IPR011115 SecA DEAD-like, N-terminal CF65_01083 IPR011116 SecA Wing/Scaffold CF65_01083 IPR011130 SecA preprotein, cross-linking domain CF65_01083 IPR020937 SecA conserved site CF65_01083 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01083 IPR036266 CF65_01083 CF65_01083 IPR036670 CF65_01083 CF65_01085 IPR000086 NUDIX hydrolase domain CF65_01085 IPR003561 Mutator MutT CF65_01085 IPR015797 NUDIX hydrolase domain-like CF65_01085 IPR020084 NUDIX hydrolase, conserved site CF65_01085 IPR020476 NUDIX hydrolase CF65_01087 IPR005790 DNA polymerase III, delta subunit CF65_01087 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CF65_01087 IPR010372 DNA polymerase III, delta CF65_01087 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01087 IPR032780 CF65_01087 CF65_01088 IPR007485 Lipopolysaccharide assembly, LptE CF65_01090 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_01090 IPR002300 Aminoacyl-tRNA synthetase, class Ia CF65_01090 IPR002302 Leucine-tRNA ligase CF65_01090 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CF65_01090 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CF65_01090 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CF65_01090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01090 IPR025709 Leucyl-tRNA synthetase, editing domain CF65_01095 IPR019722 Glucose-6-phosphate 1-dehydrogenase, bacterial CF65_01096 IPR002934 Nucleotidyl transferase domain CF65_01097 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CF65_01098 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CF65_01098 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CF65_01098 IPR029052 Metallo-dependent phosphatase-like CF65_01099 IPR001737 Ribosomal RNA adenine methylase transferase CF65_01099 IPR011530 Ribosomal RNA adenine dimethylase CF65_01099 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CF65_01099 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CF65_01099 IPR023165 rRNA adenine dimethylase-like CF65_01099 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01101 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CF65_01101 IPR015391 SurA N-terminal CF65_01101 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CF65_01101 IPR027304 Trigger factor/SurA domain CF65_01102 IPR000836 Phosphoribosyltransferase domain CF65_01102 IPR023050 Bifunctional protein PyrR CF65_01102 IPR029057 Phosphoribosyltransferase-like CF65_01104 IPR007410 DR1885-like metal-binding protein CF65_01104 IPR036182 CF65_01104 CF65_01106 IPR007451 Uncharacterised protein family UPF0274 CF65_01106 IPR035932 CF65_01106 CF65_01107 IPR000362 Fumarate lyase family CF65_01107 IPR004769 Adenylosuccinate lyase CF65_01107 IPR008948 L-Aspartase-like CF65_01107 IPR013539 Adenylosuccinate lyase PurB, C-terminal CF65_01107 IPR020557 Fumarate lyase, conserved site CF65_01107 IPR022761 Fumarate lyase, N-terminal CF65_01107 IPR024083 Fumarase/histidase, N-terminal CF65_01109 IPR002347 Glucose/ribitol dehydrogenase CF65_01109 IPR020904 Short-chain dehydrogenase/reductase, conserved site CF65_01109 IPR036291 CF65_01109 CF65_01113 IPR000551 MerR-type HTH domain CF65_01113 IPR009061 DNA binding domain, putative CF65_01114 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CF65_01114 IPR011032 GroES (chaperonin 10)-like CF65_01114 IPR013149 Alcohol dehydrogenase, C-terminal CF65_01114 IPR013154 Alcohol dehydrogenase GroES-like CF65_01114 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase CF65_01114 IPR020843 Polyketide synthase, enoylreductase CF65_01114 IPR036291 CF65_01114 CF65_01115 IPR000801 Putative esterase CF65_01115 IPR014186 S-formylglutathione hydrolase CF65_01115 IPR029058 Alpha/Beta hydrolase fold CF65_01117 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CF65_01117 IPR003593 AAA+ ATPase domain CF65_01117 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CF65_01117 IPR004780 Signal recognition particle protein Ffh CF65_01117 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle CF65_01117 IPR022941 Signal recognition particle, SRP54 subunit CF65_01117 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01117 IPR036891 CF65_01117 CF65_01120 IPR002541 Cytochrome c assembly protein CF65_01123 IPR000644 CBS domain CF65_01123 IPR002550 Domain of unknown function DUF21 CF65_01123 IPR005170 Transporter-associated domain CF65_01123 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CF65_01123 IPR036318 CF65_01123 CF65_01124 IPR002898 MotA/TolQ/ExbB proton channel CF65_01124 IPR014172 TonB-system energizer ExbB type-2 CF65_01127 IPR003538 Gram-negative bacterial TonB protein CF65_01127 IPR006260 TonB, C-terminal CF65_01127 IPR037682 CF65_01127 CF65_01132 IPR003812 Fido domain CF65_01132 IPR036597 CF65_01132 CF65_01133 IPR003812 Fido domain CF65_01133 IPR036597 CF65_01133 CF65_01137 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CF65_01137 IPR006656 Molybdopterin oxidoreductase CF65_01137 IPR006657 Molydopterin dinucleotide-binding domain CF65_01137 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CF65_01137 IPR009010 Aspartate decarboxylase-like domain CF65_01137 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE CF65_01137 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CF65_01138 IPR014297 Dimethylsulphoxide reductase, chain B CF65_01138 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_01138 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_01140 IPR007059 DMSO reductase anchor subunit (DmsC) CF65_01141 IPR020945 DMSO/Nitrate reductase chaperone CF65_01141 IPR026269 Tat proofreading chaperone DmsD-type CF65_01141 IPR028611 Tat proofreading chaperone DmsD CF65_01141 IPR036411 CF65_01141 CF65_01145 IPR002310 Glycine-tRNA ligase, alpha subunit CF65_01146 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related CF65_01146 IPR036249 CF65_01146 CF65_01147 IPR002934 Nucleotidyl transferase domain CF65_01149 IPR008909 DALR anticodon binding CF65_01149 IPR015944 Glycine-tRNA ligase, beta subunit CF65_01151 IPR001731 Porphobilinogen synthase CF65_01151 IPR013785 Aldolase-type TIM barrel CF65_01151 IPR030656 CF65_01151 CF65_01152 IPR002033 Sec-independent periplasmic protein translocase TatC CF65_01152 IPR019820 Sec-independent periplasmic protein translocase, conserved site CF65_01153 IPR018448 Twin-arginine translocation protein TatB CF65_01154 IPR003369 Sec-independent protein translocase protein TatA/B/E CF65_01154 IPR006312 Sec-independent protein translocase protein TatA/E CF65_01156 IPR000397 Heat shock protein Hsp33 CF65_01156 IPR016153 Heat shock protein Hsp33, N-terminal CF65_01156 IPR016154 Heat shock protein Hsp33, C-terminal CF65_01156 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain CF65_01158 IPR002942 RNA-binding S4 domain CF65_01158 IPR025708 Heat shock protein 15 CF65_01158 IPR036986 CF65_01158 CF65_01159 IPR006439 HAD hydrolase, subfamily IA CF65_01159 IPR023214 HAD-like domain CF65_01159 IPR036412 CF65_01159 CF65_01160 IPR000086 NUDIX hydrolase domain CF65_01160 IPR015797 NUDIX hydrolase domain-like CF65_01161 IPR009057 Homeodomain-like CF65_01161 IPR014710 RmlC-like jelly roll fold CF65_01161 IPR018060 DNA binding HTH domain, AraC-type CF65_01161 IPR020449 Transcription regulator HTH, AraC- type CF65_01161 IPR032783 CF65_01161 CF65_01161 IPR037923 CF65_01161 CF65_01162 IPR007339 Protein of unknown function DUF417 CF65_01164 IPR004813 Oligopeptide transporter, OPT superfamily CF65_01164 IPR004814 Oligopeptide transporter HI_0561 CF65_01166 IPR000760 Inositol monophosphatase CF65_01166 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial CF65_01166 IPR020550 Inositol monophosphatase, conserved site CF65_01166 IPR020583 Inositol monophosphatase, metal-binding site CF65_01167 IPR001282 Glucose-6-phosphate dehydrogenase CF65_01167 IPR019796 Glucose-6-phosphate dehydrogenase, active site CF65_01167 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CF65_01167 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CF65_01167 IPR036291 CF65_01167 CF65_01168 IPR005900 6-phosphogluconolactonase, DevB-type CF65_01168 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CF65_01168 IPR037171 CF65_01168 CF65_01171 IPR001920 Asp/Glu racemase CF65_01171 IPR004380 Aspartate racemase CF65_01171 IPR015942 Asp/Glu/hydantoin racemase CF65_01171 IPR033134 CF65_01171 CF65_01172 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related CF65_01172 IPR036249 CF65_01172 CF65_01173 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 CF65_01175 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating CF65_01175 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CF65_01175 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CF65_01175 IPR006183 CF65_01175 CF65_01175 IPR006184 6-phosphogluconate-binding site CF65_01175 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CF65_01175 IPR013328 Dehydrogenase, multihelical CF65_01175 IPR036291 CF65_01175 CF65_01177 IPR014030 Beta-ketoacyl synthase, N-terminal CF65_01177 IPR014031 Beta-ketoacyl synthase, C-terminal CF65_01177 IPR016039 Thiolase-like CF65_01177 IPR018201 Beta-ketoacyl synthase, active site CF65_01177 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CF65_01179 IPR002347 Glucose/ribitol dehydrogenase CF65_01179 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative CF65_01179 IPR036291 CF65_01179 CF65_01181 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted CF65_01181 IPR029069 HotDog domain CF65_01182 IPR014030 Beta-ketoacyl synthase, N-terminal CF65_01182 IPR014031 Beta-ketoacyl synthase, C-terminal CF65_01182 IPR016039 Thiolase-like CF65_01182 IPR018201 Beta-ketoacyl synthase, active site CF65_01182 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CF65_01187 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CF65_01187 IPR029046 Lipoprotein localisation LolA/LolB/LppX CF65_01188 IPR029069 HotDog domain CF65_01189 IPR004960 Bacterial lipid A biosynthesis acyltransferase CF65_01189 IPR014548 Predicted acyltransferase CF65_01190 IPR001173 Glycosyltransferase 2-like CF65_01190 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01191 IPR000873 AMP-dependent synthetase/ligase CF65_01193 IPR000873 AMP-dependent synthetase/ligase CF65_01193 IPR029069 HotDog domain CF65_01194 IPR009081 Acyl carrier protein-like CF65_01194 IPR036736 CF65_01194 CF65_01195 IPR009081 Acyl carrier protein-like CF65_01195 IPR036736 CF65_01195 CF65_01196 IPR002123 Phospholipid/glycerol acyltransferase CF65_01197 IPR014030 Beta-ketoacyl synthase, N-terminal CF65_01197 IPR016039 Thiolase-like CF65_01201 IPR006439 HAD hydrolase, subfamily IA CF65_01201 IPR023214 HAD-like domain CF65_01201 IPR036412 CF65_01201 CF65_01202 IPR002104 Integrase, catalytic CF65_01202 IPR004107 Integrase, SAM-like, N-terminal CF65_01202 IPR010998 Integrase, Lambda-type, N-terminal CF65_01202 IPR011010 DNA breaking-rejoining enzyme, catalytic core CF65_01202 IPR011931 Tyrosine recombinase XerC CF65_01202 IPR013762 Integrase-like, catalytic core CF65_01202 IPR023009 Tyrosine recombinase XerC/XerD CF65_01203 IPR001653 Diaminopimelate epimerase, DapF CF65_01203 IPR018510 Diaminopimelate epimerase, active site CF65_01206 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CF65_01206 IPR010918 AIR synthase-related protein, C-terminal domain CF65_01206 IPR016188 PurM, N-terminal-like CF65_01206 IPR036676 CF65_01206 CF65_01206 IPR036921 CF65_01206 CF65_01209 IPR016595 Periplasmic protein, HI0178, predicted CF65_01209 IPR031939 CF65_01209 CF65_01211 IPR001270 ClpA/B family CF65_01211 IPR003593 AAA+ ATPase domain CF65_01211 IPR003959 ATPase, AAA-type, core CF65_01211 IPR004176 Clp, N-terminal CF65_01211 IPR017730 Chaperonin ClpB CF65_01211 IPR018368 ClpA/B, conserved site 1 CF65_01211 IPR019489 Clp ATPase, C-terminal CF65_01211 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01211 IPR028299 ClpA/B, conserved site 2 CF65_01211 IPR036628 CF65_01211 CF65_01213 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CF65_01213 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CF65_01213 IPR010994 RuvA domain 2-like CF65_01215 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CF65_01215 IPR000534 Semialdehyde dehydrogenase, NAD-binding CF65_01215 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type CF65_01215 IPR012080 Aspartate-semialdehyde dehydrogenase CF65_01215 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CF65_01215 IPR036291 CF65_01215 CF65_01216 IPR000150 Cof protein CF65_01216 IPR006379 HAD-superfamily hydrolase, subfamily IIB CF65_01216 IPR023214 HAD-like domain CF65_01216 IPR036412 CF65_01216 CF65_01220 IPR029057 Phosphoribosyltransferase-like CF65_01221 IPR000361 FeS cluster biogenesis CF65_01221 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CF65_01221 IPR017726 Fe/S biogenesis protein NfuA CF65_01221 IPR034904 CF65_01221 CF65_01221 IPR035903 CF65_01221 CF65_01223 IPR004685 Branched-chain amino acid transport system II carrier protein CF65_01224 IPR004468 CTP synthase CF65_01224 IPR017456 CTP synthase, N-terminal CF65_01224 IPR017926 Glutamine amidotransferase CF65_01224 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01224 IPR029062 Class I glutamine amidotransferase-like CF65_01226 IPR002686 Transposase IS200-like CF65_01226 IPR036515 CF65_01226 CF65_01228 IPR000218 Ribosomal protein L14b/L23e CF65_01228 IPR005745 Ribosomal protein L14, bacterial-type CF65_01228 IPR019972 Ribosomal protein L14 conserved site CF65_01228 IPR036853 CF65_01228 CF65_01229 IPR003256 Ribosomal protein L24 CF65_01229 IPR005824 KOW CF65_01229 IPR005825 Ribosomal protein L24/L26, conserved site CF65_01229 IPR008991 Translation protein SH3-like domain CF65_01229 IPR014722 Ribosomal protein L2 domain 2 CF65_01230 IPR002132 Ribosomal protein L5 CF65_01230 IPR020929 Ribosomal protein L5, conserved site CF65_01230 IPR020930 Ribosomal protein L5, bacterial-type CF65_01230 IPR022803 Ribosomal protein L5 domain CF65_01230 IPR031309 CF65_01230 CF65_01230 IPR031310 CF65_01230 CF65_01231 IPR001209 Ribosomal protein S14 CF65_01231 IPR018271 Ribosomal protein S14, conserved site CF65_01231 IPR023036 Ribosomal protein S14, bacterial/plastid CF65_01232 IPR000630 Ribosomal protein S8 CF65_01232 IPR035987 CF65_01232 CF65_01233 IPR000702 Ribosomal protein L6 CF65_01233 IPR002358 Ribosomal protein L6, conserved site CF65_01233 IPR019906 Ribosomal protein L6, bacterial-type CF65_01233 IPR020040 Ribosomal protein L6, alpha-beta domain CF65_01233 IPR036789 CF65_01233 CF65_01234 IPR004389 Ribosomal protein L18, bacterial-type CF65_01234 IPR005484 Ribosomal protein L18/L5 CF65_01235 IPR005324 Ribosomal protein S5, C-terminal CF65_01235 IPR005712 Ribosomal protein S5, bacterial-type CF65_01235 IPR013810 Ribosomal protein S5, N-terminal CF65_01235 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_01235 IPR018192 Ribosomal protein S5, N-terminal, conserved site CF65_01235 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_01236 IPR001196 Ribosomal protein L15, conserved site CF65_01236 IPR005749 Ribosomal protein L15, bacterial-type CF65_01236 IPR021131 Ribosomal protein L18e/L15P CF65_01236 IPR030878 CF65_01236 CF65_01236 IPR036227 CF65_01236 CF65_01237 IPR002208 SecY/SEC61-alpha family CF65_01237 IPR023201 SecY subunit domain CF65_01237 IPR026593 Protein translocase subunit SecY CF65_01237 IPR030659 CF65_01237 CF65_01238 IPR000473 Ribosomal protein L36 CF65_01238 IPR035977 CF65_01238 CF65_01239 IPR001892 Ribosomal protein S13 CF65_01239 IPR010979 Ribosomal protein S13-like, H2TH CF65_01239 IPR018269 Ribosomal protein S13, conserved site CF65_01239 IPR019980 Ribosomal protein S13, bacterial-type CF65_01239 IPR027437 30s ribosomal protein S13, C-terminal CF65_01240 IPR001971 Ribosomal protein S11 CF65_01240 IPR018102 Ribosomal S11, conserved site CF65_01240 IPR019981 Ribosomal protein S11, bacterial-type CF65_01240 IPR036967 CF65_01240 CF65_01241 IPR001912 Ribosomal protein S4/S9, N-terminal CF65_01241 IPR002942 RNA-binding S4 domain CF65_01241 IPR005709 Ribosomal protein S4, bacterial-type CF65_01241 IPR018079 Ribosomal protein S4, conserved site CF65_01241 IPR036986 CF65_01241 CF65_01242 IPR011260 RNA polymerase, alpha subunit, C-terminal CF65_01242 IPR011262 DNA-directed RNA polymerase, insert domain CF65_01242 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CF65_01242 IPR011773 DNA-directed RNA polymerase, alpha subunit CF65_01242 IPR036603 CF65_01242 CF65_01242 IPR036643 CF65_01242 CF65_01243 IPR000456 Ribosomal protein L17 CF65_01243 IPR036373 CF65_01243 CF65_01244 IPR002686 Transposase IS200-like CF65_01244 IPR036515 CF65_01244 CF65_01245 IPR013059 Tryptophan/tyrosine transporter CF65_01245 IPR013061 Tryptophan/tryrosine permease, conserved site CF65_01245 IPR018227 Tryptophan/tyrosine permease CF65_01250 IPR001387 Cro/C1-type helix-turn-helix domain CF65_01250 IPR004821 Cytidyltransferase-like domain CF65_01250 IPR006417 Nicotinamide-nucleotide adenylyltransferase CF65_01250 IPR010982 Lambda repressor-like, DNA-binding domain CF65_01250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01250 IPR016429 Bifunctional transcriptional regulator NadR CF65_01250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01250 IPR038727 CF65_01250 CF65_01252 IPR001455 TusA-like domain CF65_01252 IPR036868 CF65_01252 CF65_01254 IPR001498 Impact, N-terminal CF65_01254 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_01254 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CF65_01254 IPR036956 CF65_01254 CF65_01258 IPR003445 Cation transporter CF65_01258 IPR004772 Potassium uptake protein TrkH family CF65_01259 IPR001226 Flavodoxin, conserved site CF65_01259 IPR026816 Flavodoxin domain CF65_01259 IPR029039 Flavoprotein-like CF65_01264 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CF65_01265 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CF65_01267 IPR010921 Trp repressor/replication initiator CF65_01268 IPR001584 Integrase, catalytic core CF65_01268 IPR012337 Ribonuclease H-like domain CF65_01270 IPR006439 HAD hydrolase, subfamily IA CF65_01270 IPR023198 Phosphoglycolate phosphatase, domain 2 CF65_01270 IPR023214 HAD-like domain CF65_01270 IPR036412 CF65_01270 CF65_01276 IPR002201 Glycosyl transferase, family 9 CF65_01277 IPR000362 Fumarate lyase family CF65_01277 IPR004708 Aspartate ammonia-lyase CF65_01277 IPR008948 L-Aspartase-like CF65_01277 IPR018951 Fumarase C, C-terminal CF65_01277 IPR020557 Fumarate lyase, conserved site CF65_01277 IPR022761 Fumarate lyase, N-terminal CF65_01277 IPR024083 Fumarase/histidase, N-terminal CF65_01279 IPR007313 FxsA cytoplasmic membrane protein CF65_01280 IPR011032 GroES (chaperonin 10)-like CF65_01280 IPR018369 Chaperonin Cpn10, conserved site CF65_01280 IPR020818 Chaperonin Cpn10 CF65_01280 IPR037124 CF65_01280 CF65_01284 IPR001844 Chaperonin Cpn60 CF65_01284 IPR002423 Chaperonin Cpn60/TCP-1 CF65_01284 IPR018370 Chaperonin Cpn60, conserved site CF65_01284 IPR027409 GroEL-like apical domain CF65_01284 IPR027410 TCP-1-like chaperonin intermediate domain CF65_01284 IPR027413 GroEL-like equatorial domain CF65_01286 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CF65_01286 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CF65_01286 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CF65_01286 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CF65_01286 IPR036291 CF65_01286 CF65_01287 IPR001584 Integrase, catalytic core CF65_01287 IPR012337 Ribonuclease H-like domain CF65_01291 IPR004602 UvrABC system subunit A CF65_01291 IPR017871 ABC transporter, conserved site CF65_01291 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01292 IPR000424 Primosome PriB/single-strand DNA-binding CF65_01292 IPR011344 Single-stranded DNA-binding protein CF65_01292 IPR012340 Nucleic acid-binding, OB-fold CF65_01294 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_01294 IPR012263 Adenine modification methylase, M.EcoRV-type CF65_01294 IPR012327 D12 class N6 adenine-specific DNA methyltransferase CF65_01294 IPR023095 Adenine-specific methyltransferase, domain 2 CF65_01294 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01295 IPR016037 3-dehydroquinate synthase AroB CF65_01295 IPR030960 CF65_01295 CF65_01295 IPR030963 CF65_01295 CF65_01296 IPR000623 Shikimate kinase/Threonine synthase-like 1 CF65_01296 IPR023000 Shikimate kinase, conserved site CF65_01296 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01296 IPR031322 CF65_01296 CF65_01297 IPR001775 GspD/PilQ family CF65_01297 IPR004846 Type II/III secretion system CF65_01297 IPR005644 NolW-like CF65_01297 IPR013355 Type IV pilus secretin PilQ CF65_01297 IPR038591 CF65_01297 CF65_01301 IPR007813 Fimbrial assembly PilN CF65_01301 IPR016778 Competence protein ComB CF65_01304 IPR001264 Glycosyl transferase, family 51 CF65_01304 IPR001460 Penicillin-binding protein, transpeptidase CF65_01304 IPR012338 Beta-lactamase/transpeptidase-like CF65_01304 IPR023346 Lysozyme-like domain CF65_01304 IPR031376 CF65_01304 CF65_01304 IPR036950 CF65_01304 CF65_01305 IPR007473 Ribosomal RNA large subunit methyltransferase J CF65_01305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01306 IPR001100 CF65_01306 CF65_01306 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF65_01306 IPR006322 Glutathione reductase, eukaryote/bacterial CF65_01306 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CF65_01306 IPR016156 FAD/NAD-linked reductase, dimerisation domain CF65_01306 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CF65_01306 IPR036188 CF65_01306 CF65_01308 IPR000595 Cyclic nucleotide-binding domain CF65_01308 IPR012318 Helix-turn-helix motif, Crp-type CF65_01308 IPR014710 RmlC-like jelly roll fold CF65_01308 IPR018335 Transcription regulator HTH, Crp-type, conserved site CF65_01308 IPR018488 Cyclic nucleotide-binding, conserved site CF65_01308 IPR018490 Cyclic nucleotide-binding-like CF65_01308 IPR036388 CF65_01308 CF65_01308 IPR036390 CF65_01308 CF65_01310 IPR010648 Uncharacterised protein family UPF0270 CF65_01310 IPR036685 CF65_01310 CF65_01311 IPR001647 DNA-binding HTH domain, TetR-type CF65_01311 IPR009057 Homeodomain-like CF65_01311 IPR023769 Nucleoid occlusion factor SlmA CF65_01311 IPR036271 CF65_01311 CF65_01313 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CF65_01313 IPR029054 dUTPase-like CF65_01313 IPR036157 CF65_01313 CF65_01315 IPR003382 Flavoprotein CF65_01315 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CF65_01315 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CF65_01315 IPR035929 CF65_01315 CF65_01315 IPR036551 CF65_01315 CF65_01317 IPR010994 RuvA domain 2-like CF65_01319 IPR001387 Cro/C1-type helix-turn-helix domain CF65_01319 IPR010982 Lambda repressor-like, DNA-binding domain CF65_01319 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_01319 IPR036286 CF65_01319 CF65_01321 IPR001405 RadC protein CF65_01321 IPR020891 Uncharacterised protein family UPF0758, conserved site CF65_01321 IPR025657 RadC-like JAB domain CF65_01323 IPR001383 Ribosomal protein L28 CF65_01323 IPR026569 Ribosomal protein L28/L24 CF65_01323 IPR034704 CF65_01323 CF65_01323 IPR037147 CF65_01323 CF65_01324 IPR001705 Ribosomal protein L33 CF65_01324 IPR011332 Zinc-binding ribosomal protein CF65_01324 IPR018264 Ribosomal protein L33, conserved site CF65_01324 IPR038584 CF65_01324 CF65_01325 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase CF65_01325 IPR010979 Ribosomal protein S13-like, H2TH CF65_01325 IPR012319 DNA glycosylase/AP lyase, catalytic domain CF65_01325 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CF65_01325 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CF65_01325 IPR020629 Formamidopyrimidine-DNA glycosylase CF65_01325 IPR035937 CF65_01325 CF65_01327 IPR002201 Glycosyl transferase, family 9 CF65_01329 IPR002201 Glycosyl transferase, family 9 CF65_01330 IPR002654 Glycosyl transferase, family 25 CF65_01331 IPR002150 Ribosomal protein L31 CF65_01331 IPR027491 Ribosomal protein L31 type A CF65_01331 IPR034704 CF65_01331 CF65_01332 IPR002654 Glycosyl transferase, family 25 CF65_01333 IPR008441 Capsular polysaccharide synthesis CF65_01333 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01334 IPR011735 HtrL protein CF65_01335 IPR001650 Helicase, C-terminal CF65_01335 IPR005259 Primosomal protein n CF65_01335 IPR011545 DEAD/DEAH box helicase domain CF65_01335 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CF65_01335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01337 IPR007730 Sporulation-related domain CF65_01337 IPR011930 Cell division protein FtsN CF65_01337 IPR036680 CF65_01337 CF65_01339 IPR001647 DNA-binding HTH domain, TetR-type CF65_01339 IPR009057 Homeodomain-like CF65_01339 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CF65_01340 IPR006143 RND efflux pump, membrane fusion protein CF65_01340 IPR032317 CF65_01340 CF65_01341 IPR001036 Acriflavin resistance protein CF65_01341 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CF65_01342 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01344 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CF65_01344 IPR004488 Magnesium/cobalt transport protein CorA CF65_01345 IPR003425 Uncharacterised protein family Ycf19 CF65_01347 IPR003746 Protein of unknown function DUF167 CF65_01347 IPR005228 Conserved hypothetical protein CHP00251 CF65_01347 IPR036591 CF65_01347 CF65_01349 IPR000415 Nitroreductase-like CF65_01349 IPR029479 Nitroreductase CF65_01351 IPR000917 Sulfatase CF65_01351 IPR012160 Membrane sulfatase, HI1246-related CF65_01351 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CF65_01351 IPR017850 Alkaline-phosphatase-like, core domain CF65_01354 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CF65_01354 IPR011324 Cytotoxic necrotizing factor-like, catalytic CF65_01354 IPR038371 CF65_01354 CF65_01355 IPR002942 RNA-binding S4 domain CF65_01355 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CF65_01355 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CF65_01355 IPR006225 Pseudouridine synthase, RluC/RluD CF65_01355 IPR020103 Pseudouridine synthase, catalytic domain CF65_01355 IPR036986 CF65_01355 CF65_01356 IPR011990 Tetratricopeptide-like helical domain CF65_01356 IPR017689 Outer membrane protein assembly factor BamD CF65_01356 IPR039565 CF65_01356 CF65_01357 IPR002698 5-formyltetrahydrofolate cyclo-ligase CF65_01357 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CF65_01357 IPR037171 CF65_01357 CF65_01358 IPR007838 Cell division protein ZapA-like CF65_01358 IPR036192 CF65_01358 CF65_01359 IPR011978 Uncharacterised protein family UPF0149 CF65_01359 IPR036255 CF65_01359 CF65_01360 IPR000994 Peptidase M24, structural domain CF65_01360 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CF65_01360 IPR007865 Aminopeptidase P, N-terminal CF65_01360 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CF65_01360 IPR036005 CF65_01360 CF65_01365 IPR000307 Ribosomal protein S16 CF65_01365 IPR020592 Ribosomal protein S16, conserved site CF65_01365 IPR023803 Ribosomal protein S16 domain CF65_01366 IPR002676 RimM protein CF65_01366 IPR009000 Translation protein, beta-barrel domain CF65_01366 IPR011033 PRC-barrel-like CF65_01366 IPR011961 16S rRNA processing protein RimM CF65_01366 IPR027275 PRC-barrel domain CF65_01366 IPR036976 CF65_01366 CF65_01367 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CF65_01367 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CF65_01367 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CF65_01367 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_01367 IPR029028 Alpha/beta knot methyltransferases CF65_01368 IPR001857 Ribosomal protein L19 CF65_01368 IPR008991 Translation protein SH3-like domain CF65_01368 IPR018257 Ribosomal protein L19, conserved site CF65_01368 IPR038657 CF65_01368 CF65_01369 IPR007227 Cell shape-determining protein MreD CF65_01369 IPR026034 Cell shape-determining protein MreD, proteobacterial type CF65_01370 IPR007221 Rod shape-determining protein MreC CF65_01371 IPR004753 Cell shape determining protein MreB/Mrl CF65_01372 IPR001900 CF65_01372 CF65_01372 IPR003029 Ribosomal protein S1, RNA-binding domain CF65_01372 IPR004476 Ribonuclease II/ribonuclease R CF65_01372 IPR011129 Cold shock protein CF65_01372 IPR011805 Ribonuclease R CF65_01372 IPR012340 Nucleic acid-binding, OB-fold CF65_01372 IPR013223 Ribonuclease B, N-terminal OB domain CF65_01372 IPR013668 Ribonuclease R winged-helix domain CF65_01372 IPR022966 Ribonuclease II/R, conserved site CF65_01372 IPR022967 RNA-binding domain, S1 CF65_01374 IPR001537 tRNA/rRNA methyltransferase, SpoU type CF65_01374 IPR004441 RNA methyltransferase TrmH family CF65_01374 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CF65_01374 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CF65_01374 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_01374 IPR029028 Alpha/beta knot methyltransferases CF65_01374 IPR029064 50S ribosomal protein L30e-like CF65_01378 IPR000849 Sugar phosphate transporter CF65_01378 IPR005267 Glycerol-3-phosphate transporter CF65_01378 IPR011701 Major facilitator superfamily CF65_01378 IPR021159 Glycerate/sugar phosphate transporter, conserved site CF65_01378 IPR036259 CF65_01378 CF65_01379 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CF65_01379 IPR030395 CF65_01379 CF65_01383 IPR003488 DNA recombination-mediator protein A CF65_01385 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CF65_01385 IPR020069 Ribosomal protein L9, C-terminal CF65_01385 IPR020070 Ribosomal protein L9, N-terminal CF65_01385 IPR020594 Ribosomal protein L9, bacteria/chloroplast CF65_01385 IPR036791 CF65_01385 CF65_01385 IPR036935 CF65_01385 CF65_01386 IPR001648 Ribosomal protein S18 CF65_01386 IPR018275 Ribosomal protein S18, conserved site CF65_01386 IPR036870 CF65_01386 CF65_01387 IPR000424 Primosome PriB/single-strand DNA-binding CF65_01387 IPR012340 Nucleic acid-binding, OB-fold CF65_01387 IPR023646 Primosomal replication protein PriB CF65_01388 IPR000529 Ribosomal protein S6 CF65_01388 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CF65_01388 IPR020814 Ribosomal protein S6, plastid/chloroplast CF65_01388 IPR020815 Ribosomal protein S6, conserved site CF65_01388 IPR035980 CF65_01388 CF65_01390 IPR006197 Peptidase S24, LexA-like CF65_01390 IPR006199 LexA repressor, DNA-binding domain CF65_01390 IPR006200 LexA repressor CF65_01390 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_01390 IPR036286 CF65_01390 CF65_01390 IPR036388 CF65_01390 CF65_01390 IPR036390 CF65_01390 CF65_01391 IPR002123 Phospholipid/glycerol acyltransferase CF65_01391 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase CF65_01391 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB CF65_01393 IPR003439 ABC transporter-like CF65_01393 IPR003593 AAA+ ATPase domain CF65_01393 IPR011527 ABC transporter type 1, transmembrane domain CF65_01393 IPR017871 ABC transporter, conserved site CF65_01393 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01393 IPR036640 CF65_01393 CF65_01394 IPR009057 Homeodomain-like CF65_01394 IPR011051 RmlC-like cupin domain CF65_01394 IPR018060 DNA binding HTH domain, AraC-type CF65_01394 IPR020449 Transcription regulator HTH, AraC- type CF65_01394 IPR032783 CF65_01394 CF65_01395 IPR003779 Carboxymuconolactone decarboxylase-like CF65_01395 IPR004675 Alkylhydroperoxidase AhpD core CF65_01395 IPR029032 AhpD-like CF65_01396 IPR002201 Glycosyl transferase, family 9 CF65_01398 IPR011009 Protein kinase-like domain CF65_01398 IPR022826 3-deoxy-D-manno-octulosonic acid kinase CF65_01400 IPR001980 Coenzyme A biosynthesis protein CF65_01400 IPR004821 Cytidyltransferase-like domain CF65_01400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01401 IPR001296 Glycosyl transferase, family 1 CF65_01401 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CF65_01401 IPR038107 CF65_01401 CF65_01402 IPR001173 Glycosyltransferase 2-like CF65_01402 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01407 IPR011055 Duplicated hybrid motif CF65_01407 IPR016047 Peptidase M23 CF65_01407 IPR018392 LysM domain CF65_01407 IPR036779 CF65_01407 CF65_01409 IPR032816 CF65_01409 CF65_01411 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CF65_01411 IPR030048 CF65_01411 CF65_01411 IPR036523 CF65_01411 CF65_01413 IPR001656 Pseudouridine synthase, TruD CF65_01413 IPR020103 Pseudouridine synthase, catalytic domain CF65_01413 IPR020119 Pseudouridine synthase TruD, conserved site CF65_01416 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CF65_01416 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CF65_01416 IPR036571 CF65_01416 CF65_01417 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CF65_01417 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CF65_01417 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01417 IPR034683 CF65_01417 CF65_01418 IPR007060 Septum formation initiator FtsL/DivIC CF65_01418 IPR023081 Cell division protein FtsB CF65_01419 IPR000056 Ribulose-phosphate 3-epimerase-like CF65_01419 IPR011060 Ribulose-phosphate binding barrel CF65_01419 IPR013785 Aldolase-type TIM barrel CF65_01419 IPR026019 Ribulose-phosphate 3-epimerase CF65_01421 IPR006346 2-phosphoglycolate phosphatase, prokaryotic CF65_01421 IPR006439 HAD hydrolase, subfamily IA CF65_01421 IPR023198 Phosphoglycolate phosphatase, domain 2 CF65_01421 IPR023214 HAD-like domain CF65_01421 IPR036412 CF65_01421 CF65_01421 IPR037512 CF65_01421 CF65_01422 IPR003439 ABC transporter-like CF65_01422 IPR003593 AAA+ ATPase domain CF65_01422 IPR005286 Cell division protein FtsE, ATP-binding CF65_01422 IPR017871 ABC transporter, conserved site CF65_01422 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01423 IPR004513 ABC transporter, cell division protein FtsX CF65_01424 IPR001721 ACT-like domain CF65_01424 IPR038110 CF65_01424 CF65_01426 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_01426 IPR036052 CF65_01426 CF65_01428 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CF65_01428 IPR012000 Thiamine pyrophosphate enzyme, central domain CF65_01428 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CF65_01428 IPR029035 DHS-like NAD/FAD-binding domain CF65_01428 IPR029061 Thiamin diphosphate-binding fold CF65_01428 IPR036052 CF65_01428 CF65_01431 IPR000150 Cof protein CF65_01431 IPR006379 HAD-superfamily hydrolase, subfamily IIB CF65_01431 IPR036412 CF65_01431 CF65_01432 IPR022742 Putative lysophospholipase CF65_01432 IPR029058 Alpha/Beta hydrolase fold CF65_01434 IPR007016 O-antigen ligase-related CF65_01436 IPR000771 Ketose-bisphosphate aldolase, class-II CF65_01436 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype CF65_01436 IPR013785 Aldolase-type TIM barrel CF65_01437 IPR001576 Phosphoglycerate kinase CF65_01437 IPR015824 Phosphoglycerate kinase, N-terminal CF65_01437 IPR015911 Phosphoglycerate kinase, conserved site CF65_01437 IPR036043 CF65_01437 CF65_01438 IPR001568 Ribonuclease T2-like CF65_01438 IPR033130 CF65_01438 CF65_01438 IPR036430 CF65_01438 CF65_01439 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_01439 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_01441 IPR001537 tRNA/rRNA methyltransferase, SpoU type CF65_01441 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CF65_01441 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted CF65_01441 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_01441 IPR029028 Alpha/beta knot methyltransferases CF65_01441 IPR029064 50S ribosomal protein L30e-like CF65_01442 IPR001736 Phospholipase D/Transphosphatidylase CF65_01442 IPR025202 Phospholipase D-like domain CF65_01444 IPR001584 Integrase, catalytic core CF65_01444 IPR012337 Ribonuclease H-like domain CF65_01445 IPR009057 Homeodomain-like CF65_01446 IPR003812 Fido domain CF65_01446 IPR036597 CF65_01446 CF65_01449 IPR004107 Integrase, SAM-like, N-terminal CF65_01449 IPR010998 Integrase, Lambda-type, N-terminal CF65_01449 IPR011010 DNA breaking-rejoining enzyme, catalytic core CF65_01449 IPR013762 Integrase-like, catalytic core CF65_01449 IPR025166 Domain of unknown function DUF4102 CF65_01449 IPR038488 CF65_01449 CF65_01451 IPR000577 CF65_01451 CF65_01451 IPR006000 Xylulokinase CF65_01451 IPR018483 Carbohydrate kinase, FGGY, conserved site CF65_01451 IPR018484 Carbohydrate kinase, FGGY, N-terminal CF65_01451 IPR018485 Carbohydrate kinase, FGGY, C-terminal CF65_01453 IPR001998 Xylose isomerase CF65_01453 IPR013452 Xylose isomerase, bacterial-type CF65_01453 IPR036237 CF65_01453 CF65_01455 IPR013456 D-xylose ABC transporter, substrate-binding protein CF65_01455 IPR025997 Periplasmic binding protein domain CF65_01455 IPR028082 Periplasmic binding protein-like I CF65_01456 IPR003439 ABC transporter-like CF65_01456 IPR003593 AAA+ ATPase domain CF65_01456 IPR013455 ABC transporter, D-xylose, ATP-binding protein CF65_01456 IPR017871 ABC transporter, conserved site CF65_01456 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01457 IPR001851 ABC transporter, permease CF65_01458 IPR004839 Aminotransferase, class I/classII CF65_01458 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_01458 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_01458 IPR015424 Pyridoxal phosphate-dependent transferase CF65_01458 IPR027619 Putative C-S lyase CF65_01459 IPR004770 Na+/H+ antiporter NhaC CF65_01459 IPR018461 Na+/H+ antiporter, NhaC-like CF65_01462 IPR009057 Homeodomain-like CF65_01462 IPR018060 DNA binding HTH domain, AraC-type CF65_01462 IPR018062 HTH domain AraC-type, conserved site CF65_01462 IPR020449 Transcription regulator HTH, AraC- type CF65_01462 IPR028082 Periplasmic binding protein-like I CF65_01463 IPR004638 Drug resistance transporter EmrB/QacA subfamily CF65_01463 IPR011701 Major facilitator superfamily CF65_01463 IPR036259 CF65_01463 CF65_01465 IPR004701 Phosphotransferase system, mannose-type IIA component CF65_01465 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CF65_01465 IPR013789 Phosphotransferase system, mannose family IIA component CF65_01465 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CF65_01465 IPR036662 CF65_01465 CF65_01465 IPR036667 CF65_01465 CF65_01466 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit CF65_01467 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CF65_01471 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_01471 IPR003356 DNA methylase, adenine-specific CF65_01471 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01473 IPR000055 Restriction endonuclease, type I, HsdS CF65_01475 IPR011204 Virulence protein RhuM-like CF65_01477 IPR006935 Helicase/UvrB domain CF65_01477 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal CF65_01477 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CF65_01477 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01479 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CF65_01479 IPR006059 Bacterial extracellular solute-binding, family 1 CF65_01480 IPR001469 ATPase, F1 complex, delta/epsilon subunit CF65_01480 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal CF65_01480 IPR036771 CF65_01480 CF65_01480 IPR036794 CF65_01480 CF65_01482 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CF65_01482 IPR003593 AAA+ ATPase domain CF65_01482 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CF65_01482 IPR005722 ATPase, F1 complex, beta subunit CF65_01482 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CF65_01482 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal CF65_01482 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01482 IPR036121 CF65_01482 CF65_01484 IPR000131 ATPase, F1 complex, gamma subunit CF65_01484 IPR023632 ATPase, F1 complex, gamma subunit conserved site CF65_01484 IPR035968 CF65_01484 CF65_01486 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CF65_01486 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal CF65_01486 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CF65_01486 IPR005294 ATPase, F1 complex, alpha subunit CF65_01486 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CF65_01486 IPR023366 ATP synthase subunit alpha-like domain CF65_01486 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01486 IPR036121 CF65_01486 CF65_01486 IPR038376 CF65_01486 CF65_01487 IPR000711 ATPase, OSCP/delta subunit CF65_01487 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CF65_01488 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast CF65_01488 IPR005864 ATPase, F0 complex, subunit B, bacterial CF65_01488 IPR028987 F-type ATP synthase subunit B-like, membrane domain CF65_01489 IPR000454 ATPase, F0 complex, subunit C CF65_01489 IPR002379 V-ATPase proteolipid subunit C-like domain CF65_01489 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast CF65_01489 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site CF65_01489 IPR035921 CF65_01489 CF65_01489 IPR038662 CF65_01489 CF65_01490 IPR000568 ATPase, F0 complex, subunit A CF65_01490 IPR023011 ATPase, F0 complex, subunit A, active site CF65_01490 IPR035908 CF65_01490 CF65_01491 IPR005598 ATP synthase protein I CF65_01492 IPR003682 rRNA small subunit methyltransferase G CF65_01492 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01494 IPR002577 Helix-turn-helix, HxlR type CF65_01494 IPR036388 CF65_01494 CF65_01494 IPR036390 CF65_01494 CF65_01495 IPR016040 NAD(P)-binding domain CF65_01495 IPR036291 CF65_01495 CF65_01496 IPR002218 Glucose-inhibited division protein A-related CF65_01496 IPR004416 Glucose-inhibited division protein A CF65_01496 IPR020595 Glucose-inhibited division protein A-related, conserved site CF65_01496 IPR026904 GidA associated domain 3 CF65_01496 IPR036188 CF65_01496 CF65_01497 IPR001094 Flavodoxin CF65_01497 IPR008254 Flavodoxin/nitric oxide synthase CF65_01497 IPR029039 Flavoprotein-like CF65_01498 IPR009252 Cell division protein ZapB CF65_01499 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase CF65_01502 IPR001451 Bacterial transferase hexapeptide repeat CF65_01502 IPR005881 Serine O-acetyltransferase CF65_01502 IPR010493 Serine acetyltransferase, N-terminal CF65_01502 IPR011004 Trimeric LpxA-like CF65_01502 IPR018357 Hexapeptide transferase, conserved site CF65_01503 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CF65_01503 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CF65_01503 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CF65_01503 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CF65_01503 IPR013328 Dehydrogenase, multihelical CF65_01503 IPR036291 CF65_01503 CF65_01506 IPR003708 Bacterial protein export chaperone SecB CF65_01506 IPR035958 CF65_01506 CF65_01507 IPR001763 Rhodanese-like domain CF65_01507 IPR036873 CF65_01507 CF65_01508 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CF65_01509 IPR003439 ABC transporter-like CF65_01509 IPR003593 AAA+ ATPase domain CF65_01509 IPR011527 ABC transporter type 1, transmembrane domain CF65_01509 IPR017871 ABC transporter, conserved site CF65_01509 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01509 IPR036640 CF65_01509 CF65_01510 IPR003439 ABC transporter-like CF65_01510 IPR003593 AAA+ ATPase domain CF65_01510 IPR011527 ABC transporter type 1, transmembrane domain CF65_01510 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CF65_01510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01510 IPR036640 CF65_01510 CF65_01511 IPR001647 DNA-binding HTH domain, TetR-type CF65_01511 IPR009057 Homeodomain-like CF65_01511 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CF65_01513 IPR000847 Transcription regulator HTH, LysR CF65_01513 IPR005119 LysR, substrate-binding CF65_01513 IPR036388 CF65_01513 CF65_01513 IPR036390 CF65_01513 CF65_01514 IPR002109 Glutaredoxin CF65_01514 IPR011767 Glutaredoxin active site CF65_01514 IPR011906 Glutaredoxin domain CF65_01514 IPR013740 Redoxin CF65_01514 IPR014025 Glutaredoxin subgroup CF65_01514 IPR036249 CF65_01514 CF65_01515 IPR007236 SlyX CF65_01517 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CF65_01517 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CF65_01517 IPR036944 CF65_01517 CF65_01519 IPR013559 YheO-like CF65_01519 IPR039445 CF65_01519 CF65_01522 IPR003787 Sulphur relay, DsrE/F-like protein CF65_01522 IPR017462 Sulphur relay, TusC/DsrF CF65_01522 IPR027396 DsrEFH-like CF65_01523 IPR007215 Sulphur relay, TusB/DsrH CF65_01523 IPR027396 DsrEFH-like CF65_01524 IPR003439 ABC transporter-like CF65_01524 IPR003593 AAA+ ATPase domain CF65_01524 IPR017871 ABC transporter, conserved site CF65_01524 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01524 IPR030679 CF65_01524 CF65_01525 IPR000515 MetI-like domain CF65_01525 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CF65_01525 IPR035906 CF65_01525 CF65_01526 IPR001638 Extracellular solute-binding protein, family 3 CF65_01526 IPR018313 Extracellular solute-binding protein, family 3, conserved site CF65_01528 IPR006076 FAD dependent oxidoreductase CF65_01528 IPR036188 CF65_01528 CF65_01530 IPR002641 Patatin/Phospholipase A2-related CF65_01530 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CF65_01533 IPR025272 Domain of unknown function DUF4065 CF65_01534 IPR007685 RelA/SpoT CF65_01537 IPR001347 Sugar isomerase (SIS) CF65_01537 IPR005486 Glucokinase regulatory protein, conserved site CF65_01537 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ CF65_01538 IPR005338 Anhydro-N-acetylmuramic acid kinase CF65_01539 IPR001451 Bacterial transferase hexapeptide repeat CF65_01539 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CF65_01539 IPR011004 Trimeric LpxA-like CF65_01539 IPR018357 Hexapeptide transferase, conserved site CF65_01539 IPR025877 MobA-like NTP transferase domain CF65_01539 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01544 IPR003848 Domain of unknown function DUF218 CF65_01544 IPR011990 Tetratricopeptide-like helical domain CF65_01544 IPR019734 Tetratricopeptide repeat CF65_01546 IPR001034 HTH DeoR N-terminal domain CF65_01546 IPR014036 DeoR C-terminal sensor domain CF65_01546 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CF65_01546 IPR037171 CF65_01546 CF65_01547 IPR002915 DeoC/FbaB/ lacD aldolase CF65_01547 IPR011343 Deoxyribose-phosphate aldolase CF65_01547 IPR013785 Aldolase-type TIM barrel CF65_01547 IPR028581 Deoxyribose-phosphate aldolase type I CF65_01549 IPR009057 Homeodomain-like CF65_01552 IPR025985 YnbE-like lipoprotein CF65_01553 IPR021730 Dicarboxylate transport CF65_01554 IPR002771 Multiple antibiotic resistance (MarC)-related CF65_01555 IPR003439 ABC transporter-like CF65_01555 IPR003593 AAA+ ATPase domain CF65_01555 IPR017871 ABC transporter, conserved site CF65_01555 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01555 IPR032781 CF65_01555 CF65_01557 IPR003593 AAA+ ATPase domain CF65_01557 IPR013765 DNA recombination and repair protein RecA CF65_01557 IPR020584 DNA recombination/repair protein RecA, conserved site CF65_01557 IPR023400 DNA recombination and repair protein RecA, C-terminal CF65_01557 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01559 IPR003783 Regulatory protein RecX CF65_01559 IPR036388 CF65_01559 CF65_01561 IPR006056 Enamine/imine deaminase YjgF-like CF65_01561 IPR006175 YjgF/Yer057p/UK114 family CF65_01561 IPR019897 YjgF-like protein, conserved site CF65_01561 IPR035959 CF65_01561 CF65_01563 IPR005474 Transketolase, N-terminal CF65_01563 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_01563 IPR005478 Transketolase, bacterial-like CF65_01563 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CF65_01563 IPR020826 Transketolase binding site CF65_01563 IPR029061 Thiamin diphosphate-binding fold CF65_01563 IPR033248 CF65_01563 CF65_01564 IPR001585 Transaldolase CF65_01564 IPR004730 Transaldolase type 1 CF65_01564 IPR013785 Aldolase-type TIM barrel CF65_01564 IPR018225 Transaldolase, active site CF65_01568 IPR003439 ABC transporter-like CF65_01568 IPR003593 AAA+ ATPase domain CF65_01568 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01569 IPR003439 ABC transporter-like CF65_01569 IPR003593 AAA+ ATPase domain CF65_01569 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CF65_01569 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01571 IPR000515 MetI-like domain CF65_01571 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CF65_01571 IPR035906 CF65_01571 CF65_01572 IPR000515 MetI-like domain CF65_01572 IPR035906 CF65_01572 CF65_01573 IPR000914 Bacterial extracellular solute-binding protein, family 5 CF65_01573 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CF65_01573 IPR030678 CF65_01573 CF65_01575 IPR007413 Protein of unknown function DUF463, YcjX-like protein CF65_01575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01577 IPR006507 Uncharacterised protein family UPF0283 CF65_01577 IPR021147 Protein of unknown function DUF697 CF65_01579 IPR002078 RNA polymerase sigma factor 54 interaction domain CF65_01579 IPR009057 Homeodomain-like CF65_01579 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CF65_01579 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01579 IPR030828 CF65_01579 CF65_01584 IPR005001 Host factor Hfq CF65_01584 IPR010920 Like-Sm (LSM) domain CF65_01585 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase CF65_01585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01586 IPR002099 DNA mismatch repair protein family CF65_01586 IPR013507 DNA mismatch repair protein, C-terminal CF65_01586 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_01586 IPR014762 DNA mismatch repair, conserved site CF65_01586 IPR014790 MutL, C-terminal, dimerisation CF65_01586 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_01586 IPR020667 DNA mismatch repair protein, MutL CF65_01586 IPR036890 CF65_01586 CF65_01586 IPR037198 CF65_01586 CF65_01588 IPR002508 Cell wall hydrolase/autolysin, catalytic CF65_01588 IPR018392 LysM domain CF65_01588 IPR036779 CF65_01588 CF65_01589 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CF65_01589 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01593 IPR001173 Glycosyltransferase 2-like CF65_01593 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01594 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01595 IPR036259 CF65_01595 CF65_01596 IPR000917 Sulfatase CF65_01596 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CF65_01596 IPR017850 Alkaline-phosphatase-like, core domain CF65_01597 IPR012337 Ribonuclease H-like domain CF65_01597 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_01597 IPR022894 Oligoribonuclease CF65_01597 IPR036397 CF65_01597 CF65_01598 IPR004881 Ribosome biogenesis GTPase RsgA, putative CF65_01598 IPR010914 EngC GTPase CF65_01598 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01599 IPR000032 Phosphocarrier HPr protein-like CF65_01599 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CF65_01599 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CF65_01599 IPR035895 CF65_01599 CF65_01600 IPR000121 PEP-utilising enzyme, C-terminal CF65_01600 IPR006318 Phosphoenolpyruvate-utilising enzyme CF65_01600 IPR008279 PEP-utilising enzyme, mobile domain CF65_01600 IPR008731 Phosphotransferase system, enzyme I N-terminal CF65_01600 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CF65_01600 IPR018274 PEP-utilising enzyme, active site CF65_01600 IPR023151 PEP-utilising enzyme, conserved site CF65_01600 IPR024692 Phosphotransferase system, enzyme I CF65_01600 IPR036618 CF65_01600 CF65_01600 IPR036637 CF65_01600 CF65_01601 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CF65_01601 IPR011055 Duplicated hybrid motif CF65_01603 IPR001567 Peptidase M3A/M3B CF65_01603 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CF65_01604 IPR007401 Protein of unknown function DUF454 CF65_01607 IPR000914 Bacterial extracellular solute-binding protein, family 5 CF65_01607 IPR030678 CF65_01607 CF65_01608 IPR001544 Aminotransferase, class IV CF65_01608 IPR036038 CF65_01608 CF65_01609 IPR005801 ADC synthase CF65_01609 IPR015890 Chorismate binding, C-terminal CF65_01609 IPR019999 Anthranilate synthase component I - like CF65_01611 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CF65_01611 IPR017926 Glutamine amidotransferase CF65_01611 IPR029062 Class I glutamine amidotransferase-like CF65_01614 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF65_01614 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CF65_01614 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CF65_01614 IPR036291 CF65_01614 CF65_01615 IPR003838 Permease FtsX-like CF65_01615 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family CF65_01615 IPR025857 MacB-like periplasmic core domain CF65_01616 IPR003439 ABC transporter-like CF65_01616 IPR003593 AAA+ ATPase domain CF65_01616 IPR011924 Lipoprotein releasing system, ATP-binding protein CF65_01616 IPR017871 ABC transporter, conserved site CF65_01616 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01618 IPR003838 Permease FtsX-like CF65_01618 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family CF65_01618 IPR011926 Lipoprotein releasing system, transmembrane protein LolE CF65_01618 IPR025857 MacB-like periplasmic core domain CF65_01619 IPR006218 DAHP synthetase I/KDSA CF65_01619 IPR006219 DHAP synthase, class 1 CF65_01619 IPR013785 Aldolase-type TIM barrel CF65_01621 IPR003593 AAA+ ATPase domain CF65_01621 IPR007692 DNA helicase, DnaB type CF65_01621 IPR007693 DNA helicase, DnaB-like, N-terminal CF65_01621 IPR007694 DNA helicase, DnaB-like, C-terminal CF65_01621 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CF65_01621 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01621 IPR036185 CF65_01621 CF65_01623 IPR000821 Alanine racemase CF65_01623 IPR001608 Alanine racemase, N-terminal CF65_01623 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CF65_01623 IPR011079 Alanine racemase, C-terminal CF65_01623 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CF65_01623 IPR029066 PLP-binding barrel CF65_01624 IPR001672 Phosphoglucose isomerase (PGI) CF65_01624 IPR018189 Phosphoglucose isomerase, conserved site CF65_01624 IPR023096 Phosphoglucose isomerase, C-terminal CF65_01625 IPR002180 6,7-dimethyl-8-ribityllumazine synthase CF65_01625 IPR034964 CF65_01625 CF65_01625 IPR036467 CF65_01625 CF65_01626 IPR006027 NusB/RsmB/TIM44 CF65_01626 IPR011605 NusB antitermination factor CF65_01626 IPR035926 CF65_01626 CF65_01628 IPR006283 Thiamine-monophosphate kinase CF65_01628 IPR010918 AIR synthase-related protein, C-terminal domain CF65_01628 IPR016188 PurM, N-terminal-like CF65_01628 IPR036676 CF65_01628 CF65_01628 IPR036921 CF65_01628 CF65_01629 IPR007686 YutG/PgpA domain CF65_01629 IPR026037 Phosphatidylglycerophosphatase A CF65_01629 IPR036681 CF65_01629 CF65_01630 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CF65_01631 IPR000846 Dihydrodipicolinate reductase, N-terminal CF65_01631 IPR022663 Dihydrodipicolinate reductase, C-terminal CF65_01631 IPR022664 Dihydrodipicolinate reductase, conserved site CF65_01631 IPR023940 Dihydrodipicolinate reductase, bacterial CF65_01631 IPR036291 CF65_01631 CF65_01633 IPR001041 2Fe-2S ferredoxin-type domain CF65_01633 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CF65_01633 IPR012675 Beta-grasp domain CF65_01633 IPR036010 CF65_01633 CF65_01635 IPR000358 Ribonucleotide reductase small subunit CF65_01635 IPR009078 Ferritin-like superfamily CF65_01635 IPR012348 Ribonucleotide reductase-related CF65_01635 IPR030475 CF65_01635 CF65_01637 IPR000788 Ribonucleotide reductase large subunit, C-terminal CF65_01637 IPR005144 ATP-cone CF65_01637 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CF65_01637 IPR013346 Ribonucleotide reductase, class I , alpha subunit CF65_01637 IPR013509 Ribonucleotide reductase large subunit, N-terminal CF65_01640 IPR022625 Type I restriction and modification enzyme, subunit R, C-terminal CF65_01642 IPR026045 Ferric binding protein CF65_01644 IPR000515 MetI-like domain CF65_01644 IPR035906 CF65_01644 CF65_01645 IPR003439 ABC transporter-like CF65_01645 IPR003593 AAA+ ATPase domain CF65_01645 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01645 IPR017871 ABC transporter, conserved site CF65_01645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01648 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CF65_01648 IPR014635 Alpha-amylase, MalS type CF65_01648 IPR017853 Glycoside hydrolase, superfamily CF65_01649 IPR000515 MetI-like domain CF65_01649 IPR035906 CF65_01649 CF65_01650 IPR000515 MetI-like domain CF65_01650 IPR029345 Maltose transport system permease protein MalF, P2 domain CF65_01650 IPR035277 CF65_01650 CF65_01650 IPR035906 CF65_01650 CF65_01654 IPR006059 Bacterial extracellular solute-binding, family 1 CF65_01654 IPR006060 Maltose binding protein CF65_01656 IPR003439 ABC transporter-like CF65_01656 IPR003593 AAA+ ATPase domain CF65_01656 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01656 IPR013611 Transport-associated OB, type 2 CF65_01656 IPR017871 ABC transporter, conserved site CF65_01656 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01657 IPR003192 Porin, LamB type CF65_01657 IPR036998 CF65_01657 CF65_01658 IPR010794 Maltose operon periplasmic CF65_01661 IPR000594 UBA/THIF-type NAD/FAD binding fold CF65_01661 IPR012730 Molybdopterin synthase sulfurylase MoeB CF65_01661 IPR035985 CF65_01661 CF65_01662 IPR001453 Molybdopterin binding domain CF65_01662 IPR005110 MoeA, N-terminal and linker domain CF65_01662 IPR005111 MoeA, C-terminal, domain IV CF65_01662 IPR008284 Molybdenum cofactor biosynthesis, conserved site CF65_01662 IPR036135 CF65_01662 CF65_01662 IPR036425 CF65_01662 CF65_01662 IPR036688 CF65_01662 CF65_01663 IPR001474 GTP cyclohydrolase I CF65_01663 IPR018234 GTP cyclohydrolase I, conserved site CF65_01663 IPR020602 GTP cyclohydrolase I domain CF65_01666 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C CF65_01666 IPR012338 Beta-lactamase/transpeptidase-like CF65_01668 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CF65_01668 IPR006359 Transcription elongation factor GreA CF65_01668 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CF65_01668 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CF65_01668 IPR023459 Transcription elongation factor GreA/GreB family CF65_01668 IPR028624 Transcription elongation factor GreA/GreB CF65_01668 IPR036805 CF65_01668 CF65_01668 IPR036953 CF65_01668 CF65_01670 IPR001890 RNA-binding, CRM domain CF65_01670 IPR017924 RNA-binding protein YhbY CF65_01670 IPR035920 CF65_01670 CF65_01671 IPR009241 Addiction module killer protein CF65_01671 IPR014056 Addiction module killer protein, predicted CF65_01672 IPR001387 Cro/C1-type helix-turn-helix domain CF65_01672 IPR010982 Lambda repressor-like, DNA-binding domain CF65_01672 IPR014057 Addiction module antidote protein, HI1420 CF65_01673 IPR001783 Lumazine-binding protein CF65_01673 IPR017938 Riboflavin synthase-like beta-barrel CF65_01673 IPR023366 ATP synthase subunit alpha-like domain CF65_01673 IPR026017 Lumazine-binding domain CF65_01675 IPR002528 Multi antimicrobial extrusion protein CF65_01678 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CF65_01678 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CF65_01678 IPR036754 CF65_01678 CF65_01679 IPR000534 Semialdehyde dehydrogenase, NAD-binding CF65_01679 IPR036291 CF65_01679 CF65_01682 IPR000515 MetI-like domain CF65_01682 IPR006469 NifC-like ABC-type porter CF65_01682 IPR035906 CF65_01682 CF65_01684 IPR003439 ABC transporter-like CF65_01684 IPR003593 AAA+ ATPase domain CF65_01684 IPR017871 ABC transporter, conserved site CF65_01684 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01685 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CF65_01685 IPR006242 Putative pyrophosphorylase ModD CF65_01685 IPR013785 Aldolase-type TIM barrel CF65_01685 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CF65_01685 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CF65_01685 IPR036068 CF65_01685 CF65_01685 IPR037128 CF65_01685 CF65_01687 IPR002510 TldD/PmbA CF65_01687 IPR025502 TldD CF65_01687 IPR035068 CF65_01687 CF65_01687 IPR036059 CF65_01687 CF65_01688 IPR001599 Alpha-2-macroglobulin CF65_01688 IPR002890 Alpha-2-macroglobulin, N-terminal CF65_01688 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CF65_01688 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CF65_01689 IPR004630 Uncharacterised protein family UPF0324, bacteria CF65_01689 IPR018383 Uncharacterised protein family UPF0324, prokaryote CF65_01690 IPR001264 Glycosyl transferase, family 51 CF65_01690 IPR001460 Penicillin-binding protein, transpeptidase CF65_01690 IPR009647 Penicillin-binding, C-terminal CF65_01690 IPR011815 Penicillin-binding protein 1C CF65_01690 IPR012338 Beta-lactamase/transpeptidase-like CF65_01690 IPR023346 Lysozyme-like domain CF65_01690 IPR036950 CF65_01690 CF65_01692 IPR001754 Orotidine 5'-phosphate decarboxylase domain CF65_01692 IPR011060 Ribulose-phosphate binding barrel CF65_01692 IPR013785 Aldolase-type TIM barrel CF65_01694 IPR002178 PTS EIIA type-2 domain CF65_01694 IPR016152 Phosphotransferase/anion transporter CF65_01695 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CF65_01695 IPR004703 Phosphotransferase system, sugar-specific permease component CF65_01695 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted CF65_01695 IPR036095 CF65_01695 CF65_01696 IPR036866 CF65_01696 CF65_01698 IPR001034 HTH DeoR N-terminal domain CF65_01698 IPR014036 DeoR C-terminal sensor domain CF65_01698 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CF65_01698 IPR036388 CF65_01698 CF65_01698 IPR036390 CF65_01698 CF65_01698 IPR037171 CF65_01698 CF65_01700 IPR004560 L-ribulose-5-phosphate 3-epimerase CF65_01700 IPR013022 Xylose isomerase-like, TIM barrel domain CF65_01700 IPR036237 CF65_01700 CF65_01703 IPR001303 Class II aldolase/adducin N-terminal CF65_01703 IPR004661 L-ribulose-5-phosphate 4-epimerase CF65_01703 IPR036409 CF65_01703 CF65_01704 IPR013059 Tryptophan/tyrosine transporter CF65_01704 IPR013061 Tryptophan/tryrosine permease, conserved site CF65_01704 IPR018227 Tryptophan/tyrosine permease CF65_01705 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CF65_01705 IPR008979 Galactose-binding domain-like CF65_01708 IPR002109 Glutaredoxin CF65_01708 IPR011767 Glutaredoxin active site CF65_01708 IPR011902 Glutaredoxin, GrxA CF65_01708 IPR014025 Glutaredoxin subgroup CF65_01708 IPR036249 CF65_01708 CF65_01709 IPR000415 Nitroreductase-like CF65_01709 IPR016446 Flavin oxidoreductase Frp family CF65_01709 IPR029479 Nitroreductase CF65_01710 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX CF65_01710 IPR013651 ATP-grasp fold, RimK-type CF65_01710 IPR013815 ATP-grasp fold, subdomain 1 CF65_01711 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CF65_01717 IPR000362 Fumarate lyase family CF65_01717 IPR005677 Fumarate hydratase, class II CF65_01717 IPR008948 L-Aspartase-like CF65_01717 IPR018951 Fumarase C, C-terminal CF65_01717 IPR020557 Fumarate lyase, conserved site CF65_01717 IPR022761 Fumarate lyase, N-terminal CF65_01717 IPR024083 Fumarase/histidase, N-terminal CF65_01718 IPR007459 DNA polymerase III chi subunit, HolC CF65_01718 IPR036768 CF65_01718 CF65_01720 IPR007374 ASCH domain CF65_01720 IPR015947 PUA-like domain CF65_01722 IPR007374 ASCH domain CF65_01722 IPR015947 PUA-like domain CF65_01723 IPR024402 Domain of unknown function DUF2726 CF65_01724 IPR002300 Aminoacyl-tRNA synthetase, class Ia CF65_01724 IPR002303 Valine-tRNA ligase CF65_01724 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CF65_01724 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CF65_01724 IPR010978 tRNA-binding arm CF65_01724 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CF65_01724 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01724 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CF65_01724 IPR037118 CF65_01724 CF65_01728 IPR017508 HipA, N-terminal subdomain 1 CF65_01731 IPR004638 Drug resistance transporter EmrB/QacA subfamily CF65_01731 IPR011701 Major facilitator superfamily CF65_01731 IPR036259 CF65_01731 CF65_01732 IPR005694 Efflux pump membrane protein Emr CF65_01732 IPR006143 RND efflux pump, membrane fusion protein CF65_01732 IPR032317 CF65_01732 CF65_01734 IPR002177 DNA-binding protein Dps CF65_01734 IPR008331 Ferritin/DPS protein domain CF65_01734 IPR009078 Ferritin-like superfamily CF65_01734 IPR012347 Ferritin-related CF65_01734 IPR023188 DNA-binding protein Dps, conserved site CF65_01737 IPR001900 CF65_01737 CF65_01737 IPR003029 Ribosomal protein S1, RNA-binding domain CF65_01737 IPR004476 Ribonuclease II/ribonuclease R CF65_01737 IPR011129 Cold shock protein CF65_01737 IPR011804 Ribonuclease II CF65_01737 IPR012340 Nucleic acid-binding, OB-fold CF65_01737 IPR013223 Ribonuclease B, N-terminal OB domain CF65_01737 IPR022966 Ribonuclease II/R, conserved site CF65_01737 IPR022967 RNA-binding domain, S1 CF65_01738 IPR002347 Glucose/ribitol dehydrogenase CF65_01738 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CF65_01738 IPR036291 CF65_01738 CF65_01739 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CF65_01739 IPR036069 CF65_01739 CF65_01740 IPR007197 Radical SAM CF65_01740 IPR013785 Aldolase-type TIM barrel CF65_01740 IPR024924 7-carboxy-7-deazaguanine synthase-like CF65_01741 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CF65_01741 IPR038418 CF65_01741 CF65_01743 IPR002313 Lysine-tRNA ligase, class II CF65_01743 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CF65_01743 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CF65_01743 IPR012340 Nucleic acid-binding, OB-fold CF65_01743 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CF65_01743 IPR034762 CF65_01743 CF65_01744 IPR000352 Peptide chain release factor class I/class II CF65_01744 IPR004374 Peptide chain release factor 2 CF65_01744 IPR005139 Peptide chain release factor CF65_01746 IPR009094 Disulphide bond isomerase, DsbC, N-terminal CF65_01746 IPR012336 Thioredoxin-like fold CF65_01746 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CF65_01746 IPR036249 CF65_01746 CF65_01747 IPR001667 DDH domain CF65_01747 IPR003156 DHHA1 domain CF65_01747 IPR004610 Bacterial RecJ exonuclease CF65_01747 IPR038763 CF65_01747 CF65_01748 IPR036249 CF65_01748 CF65_01750 IPR000845 Nucleoside phosphorylase domain CF65_01750 IPR010049 MTA/SAH nucleosidase CF65_01750 IPR035994 CF65_01750 CF65_01751 IPR019613 Protein of unknown function DUF4198 CF65_01755 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family CF65_01756 IPR003339 ABC/ECF transporter, transmembrane component CF65_01757 IPR003439 ABC transporter-like CF65_01757 IPR003593 AAA+ ATPase domain CF65_01757 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01758 IPR003495 CobW/HypB/UreG domain CF65_01758 IPR004392 Hydrogenase accessory protein HypB CF65_01758 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase CF65_01758 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01759 IPR002780 Hydrogenase formation HypD protein CF65_01760 IPR016188 PurM, N-terminal-like CF65_01760 IPR036921 CF65_01760 CF65_01765 IPR003314 Transposase MuA/Repressor CI, DNA-binding CF65_01765 IPR009057 Homeodomain-like CF65_01765 IPR009061 DNA binding domain, putative CF65_01765 IPR015126 Mu DNA binding, I gamma subdomain CF65_01765 IPR036388 CF65_01765 CF65_01772 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CF65_01772 IPR036291 CF65_01772 CF65_01774 IPR003171 Methylenetetrahydrofolate reductase CF65_01774 IPR004620 5,10-methylenetetrahydrofolate reductase CF65_01774 IPR029041 FAD-linked oxidoreductase-like CF65_01776 IPR005495 Permease YjgP/YjgQ, predicted CF65_01776 IPR030923 CF65_01776 CF65_01777 IPR005495 Permease YjgP/YjgQ, predicted CF65_01777 IPR030922 CF65_01777 CF65_01778 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CF65_01778 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CF65_01778 IPR011356 Leucine aminopeptidase/peptidase B CF65_01778 IPR023042 Peptidase M17, leucine aminopeptidase CF65_01779 IPR003439 ABC transporter-like CF65_01779 IPR003593 AAA+ ATPase domain CF65_01779 IPR004606 Molybdenum-pterin binding CF65_01779 IPR005116 Transport-associated OB, type 1 CF65_01779 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01779 IPR011868 Molybdate ABC transporter, ATP-binding protein CF65_01779 IPR017871 ABC transporter, conserved site CF65_01779 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01780 IPR000515 MetI-like domain CF65_01780 IPR011867 Molybdate ABC transporter, permease protein CF65_01780 IPR035906 CF65_01780 CF65_01781 IPR005950 Molybdenum ABC transporter, periplasmic binding protein CF65_01782 IPR000847 Transcription regulator HTH, LysR CF65_01782 IPR003725 Molybdenum-binding protein, N-terminal CF65_01782 IPR004606 Molybdenum-pterin binding CF65_01782 IPR005116 Transport-associated OB, type 1 CF65_01782 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01782 IPR016462 Molybdate-dependent transcriptional regulator, ModE CF65_01782 IPR036388 CF65_01782 CF65_01782 IPR036390 CF65_01782 CF65_01784 IPR001898 Sodium/sulphate symporter CF65_01784 IPR031312 CF65_01784 CF65_01787 IPR003607 HD/PDEase domain CF65_01787 IPR006674 HD domain CF65_01787 IPR022971 5'-deoxynucleotidase YfbR CF65_01789 IPR001478 PDZ domain CF65_01789 IPR001940 Peptidase S1C CF65_01789 IPR009003 Trypsin-like cysteine/serine peptidase domain CF65_01789 IPR011783 Peptidase S1C, DegS CF65_01789 IPR036034 CF65_01789 CF65_01790 IPR002125 CMP/dCMP deaminase, zinc-binding CF65_01790 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CF65_01790 IPR004794 Riboflavin biosynthesis protein RibD CF65_01790 IPR011549 Riboflavin-specific deaminase, C-terminal CF65_01790 IPR016192 APOBEC/CMP deaminase, zinc-binding CF65_01790 IPR016193 Cytidine deaminase-like CF65_01790 IPR024072 Dihydrofolate reductase-like domain CF65_01792 IPR003796 Ribonucleotide reductase regulator NrdR-like CF65_01792 IPR005144 ATP-cone CF65_01793 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CF65_01793 IPR011224 Ribosomal RNA large subunit methyltransferase M CF65_01793 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01794 IPR000847 Transcription regulator HTH, LysR CF65_01794 IPR005119 LysR, substrate-binding CF65_01794 IPR036388 CF65_01794 CF65_01794 IPR036390 CF65_01794 CF65_01796 IPR001544 Aminotransferase, class IV CF65_01796 IPR005786 Branched-chain amino acid aminotransferase II CF65_01796 IPR018300 Aminotransferase, class IV, conserved site CF65_01796 IPR036038 CF65_01796 CF65_01801 IPR001236 Lactate/malate dehydrogenase, N-terminal CF65_01801 IPR001252 Malate dehydrogenase, active site CF65_01801 IPR001557 L-lactate/malate dehydrogenase CF65_01801 IPR010097 Malate dehydrogenase, type 1 CF65_01801 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CF65_01801 IPR022383 Lactate/malate dehydrogenase, C-terminal CF65_01801 IPR023958 Malate dehydrogenase, type 1, bacterial CF65_01801 IPR036291 CF65_01801 CF65_01803 IPR001669 Arginine repressor CF65_01803 IPR020899 Arginine repressor, C-terminal CF65_01803 IPR020900 Arginine repressor, DNA-binding domain CF65_01803 IPR036251 CF65_01803 CF65_01803 IPR036388 CF65_01803 CF65_01803 IPR036390 CF65_01803 CF65_01804 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CF65_01804 IPR010099 Sugar nucleotide epimerase YfcH,-like putative CF65_01804 IPR013549 Domain of unknown function DUF1731 CF65_01804 IPR036291 CF65_01804 CF65_01805 IPR003667 Electron transport complex, Rnf/Nqr CF65_01805 IPR011293 Electron transport complex, RnfA CF65_01807 IPR007202 4Fe-4S domain CF65_01807 IPR010207 Electron transport complex, RnfB CF65_01807 IPR016463 Electron transport complex, RnfB, Proteobacteria CF65_01807 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_01808 IPR009051 Alpha-helical ferredoxin CF65_01808 IPR010208 Electron transport complex protein RnfC CF65_01808 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CF65_01808 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_01808 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_01808 IPR019554 Soluble ligand binding domain CF65_01808 IPR026902 RnfC Barrel sandwich hybrid domain CF65_01808 IPR037225 CF65_01808 CF65_01810 IPR004338 NADH-quinone reductase NQR2/RnfD CF65_01810 IPR011303 Electron transport complex, RnfD CF65_01811 IPR007329 FMN-binding CF65_01811 IPR010209 Electron transport complex, RnfG CF65_01813 IPR003667 Electron transport complex, Rnf/Nqr CF65_01813 IPR010968 Electron transport complex, RnfE CF65_01814 IPR000445 Helix-hairpin-helix motif CF65_01814 IPR003265 HhH-GPD domain CF65_01814 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CF65_01814 IPR004035 Endonuclease III, iron-sulphur binding site CF65_01814 IPR004036 Endonuclease III-like, conserved site-2 CF65_01814 IPR005759 Endonuclease III CF65_01814 IPR011257 DNA glycosylase CF65_01814 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CF65_01815 IPR000175 Sodium:neurotransmitter symporter CF65_01815 IPR037272 CF65_01815 CF65_01818 IPR001626 ABC-3 CF65_01818 IPR037294 CF65_01818 CF65_01820 IPR003439 ABC transporter-like CF65_01820 IPR003593 AAA+ ATPase domain CF65_01820 IPR017871 ABC transporter, conserved site CF65_01820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01822 IPR011055 Duplicated hybrid motif CF65_01822 IPR016047 Peptidase M23 CF65_01824 IPR003439 ABC transporter-like CF65_01824 IPR003593 AAA+ ATPase domain CF65_01824 IPR017871 ABC transporter, conserved site CF65_01824 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01825 IPR000522 ABC transporter, permease protein CF65_01825 IPR037294 CF65_01825 CF65_01826 IPR000522 ABC transporter, permease protein CF65_01826 IPR037294 CF65_01826 CF65_01827 IPR002491 ABC transporter periplasmic binding domain CF65_01830 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CF65_01830 IPR006146 5'-Nucleotidase, conserved site CF65_01830 IPR006179 5'-Nucleotidase/apyrase CF65_01830 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CF65_01830 IPR008334 5'-Nucleotidase, C-terminal CF65_01830 IPR029052 Metallo-dependent phosphatase-like CF65_01830 IPR036907 CF65_01830 CF65_01832 IPR006452 Formate dehydrogenase accessory protein CF65_01832 IPR024064 FdhE-like CF65_01835 IPR005220 Viral OB-fold, YgiW CF65_01835 IPR016052 Bacteriophage 933W, L0136 CF65_01835 IPR036700 CF65_01835 CF65_01837 IPR001789 Signal transduction response regulator, receiver domain CF65_01837 IPR007539 Domain of unknown function DUF551 CF65_01837 IPR011006 CheY-like superfamily CF65_01838 IPR009363 Bacteriophage Mu, Gp16 CF65_01839 IPR009057 Homeodomain-like CF65_01839 IPR014875 Mor transcription activator CF65_01841 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01842 IPR001867 Signal transduction response regulator, C-terminal CF65_01842 IPR016032 Signal transduction response regulator, C-terminal effector CF65_01842 IPR036388 CF65_01842 CF65_01843 IPR003594 Histidine kinase-like ATPase, C-terminal domain CF65_01843 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CF65_01843 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CF65_01843 IPR013727 Two-component sensor kinase N-terminal CF65_01843 IPR036097 CF65_01843 CF65_01843 IPR036890 CF65_01843 CF65_01845 IPR000101 Gamma-glutamyltranspeptidase CF65_01845 IPR029055 Nucleophile aminohydrolases, N-terminal CF65_01846 IPR019629 Uncharacterised protein family HI1736/YgjV CF65_01846 IPR020137 Uncharacterised protein family HI1736 CF65_01848 IPR001518 Argininosuccinate synthase CF65_01848 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01848 IPR018223 Argininosuccinate synthase, conserved site CF65_01848 IPR023437 Argininosuccinate synthase, type 2 subfamily CF65_01848 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail CF65_01848 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CF65_01850 IPR036291 CF65_01850 CF65_01852 IPR000795 Elongation factor, GTP-binding domain CF65_01852 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CF65_01852 IPR004548 Peptide chain release factor 3 CF65_01852 IPR005225 Small GTP-binding protein domain CF65_01852 IPR009000 Translation protein, beta-barrel domain CF65_01852 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01852 IPR031157 CF65_01852 CF65_01852 IPR032090 CF65_01852 CF65_01852 IPR035647 CF65_01852 CF65_01852 IPR038467 CF65_01852 CF65_01854 IPR009241 Addiction module killer protein CF65_01855 IPR001387 Cro/C1-type helix-turn-helix domain CF65_01855 IPR010982 Lambda repressor-like, DNA-binding domain CF65_01855 IPR039554 CF65_01855 CF65_01857 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CF65_01857 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CF65_01857 IPR023057 Glutamate-ammonia-ligase adenylyltransferase CF65_01858 IPR006483 CRISPR-associated Cas3-HD domain CF65_01858 IPR006674 HD domain CF65_01858 IPR038257 CF65_01858 CF65_01861 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CF65_01861 IPR029056 Ribokinase-like CF65_01865 IPR005948 Thiamine ABC transporter periplasmic binding protein CF65_01865 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein CF65_01865 IPR006059 Bacterial extracellular solute-binding, family 1 CF65_01866 IPR000515 MetI-like domain CF65_01866 IPR005947 Thiamine ABC transporter, permease protein CF65_01866 IPR035906 CF65_01866 CF65_01867 IPR003439 ABC transporter-like CF65_01867 IPR003593 AAA+ ATPase domain CF65_01867 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ CF65_01867 IPR017871 ABC transporter, conserved site CF65_01867 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01868 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CF65_01868 IPR006638 Elongator protein 3/MiaB/NifB CF65_01868 IPR007197 Radical SAM CF65_01868 IPR010722 Biotin and thiamin synthesis-associated domain CF65_01868 IPR013785 Aldolase-type TIM barrel CF65_01868 IPR024177 Biotin synthase CF65_01869 IPR001478 PDZ domain CF65_01869 IPR001940 Peptidase S1C CF65_01869 IPR009003 Trypsin-like cysteine/serine peptidase domain CF65_01869 IPR011782 Peptidase S1C, Do CF65_01869 IPR036034 CF65_01869 CF65_01871 IPR009386 Protein of unknown function DUF1043 CF65_01872 IPR003776 YcaO-like domain CF65_01873 IPR001250 Mannose-6-phosphate isomerase, type I CF65_01873 IPR011051 RmlC-like cupin domain CF65_01873 IPR014710 RmlC-like jelly roll fold CF65_01873 IPR016305 Mannose-6-phosphate isomerase CF65_01873 IPR018050 Phosphomannose isomerase, type I, conserved site CF65_01874 IPR010879 Domain of unknown function DUF1508 CF65_01874 IPR036913 CF65_01874 CF65_01875 IPR003352 Phosphotransferase system, EIIC CF65_01876 IPR001996 Phosphotransferase system, IIB component, type 1 CF65_01876 IPR003352 Phosphotransferase system, EIIC CF65_01876 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CF65_01876 IPR036878 CF65_01876 CF65_01877 IPR013216 Methyltransferase type 11 CF65_01877 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01878 IPR001279 Beta-lactamase-like CF65_01878 IPR017782 Hydroxyacylglutathione hydrolase CF65_01878 IPR032282 CF65_01878 CF65_01878 IPR036866 CF65_01878 CF65_01879 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CF65_01879 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CF65_01879 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CF65_01879 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CF65_01879 IPR018214 Glutamyl-tRNA reductase, conserved site CF65_01879 IPR036291 CF65_01879 CF65_01879 IPR036343 CF65_01879 CF65_01879 IPR036453 CF65_01879 CF65_01880 IPR000600 ROK CF65_01880 IPR036388 CF65_01880 CF65_01880 IPR036390 CF65_01880 CF65_01881 IPR000850 Adenylate kinase/UMP-CMP kinase CF65_01881 IPR006259 Adenylate kinase subfamily CF65_01881 IPR007862 Adenylate kinase, active site lid domain CF65_01881 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01881 IPR033690 CF65_01881 CF65_01883 IPR011701 Major facilitator superfamily CF65_01883 IPR036259 CF65_01883 CF65_01885 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF CF65_01886 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CF65_01886 IPR005886 UDP-glucose 4-epimerase GalE CF65_01886 IPR036291 CF65_01886 CF65_01887 IPR008523 Lactobacillus phage LBR48, DUF805 CF65_01889 IPR006043 Xanthine/uracil/vitamin C permease CF65_01890 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase CF65_01890 IPR012094 Lysidine-tRNA(Ile) synthetase CF65_01890 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal CF65_01890 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CF65_01890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01890 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain CF65_01891 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase CF65_01891 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CF65_01891 IPR029056 Ribokinase-like CF65_01893 IPR001095 Acetyl-CoA carboxylase, alpha subunit CF65_01893 IPR029045 ClpP/crotonase-like domain CF65_01894 IPR000895 Transthyretin/hydroxyisourate hydrolase CF65_01894 IPR014306 Hydroxyisourate hydrolase CF65_01894 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily CF65_01894 IPR023418 Transthyretin, thyroxine binding site CF65_01894 IPR023419 Transthyretin, conserved site CF65_01894 IPR036817 CF65_01894 CF65_01897 IPR009061 DNA binding domain, putative CF65_01897 IPR010260 Bacteriophage P4, Orf88 CF65_01900 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal CF65_01902 IPR003497 BRO N-terminal domain CF65_01906 IPR001387 Cro/C1-type helix-turn-helix domain CF65_01906 IPR010982 Lambda repressor-like, DNA-binding domain CF65_01906 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_01906 IPR036286 CF65_01906 CF65_01908 IPR020114 Cro repressor, HK022-type CF65_01909 IPR010982 Lambda repressor-like, DNA-binding domain CF65_01913 IPR001674 GMP synthase, C-terminal CF65_01913 IPR004739 GMP synthase, N-terminal CF65_01913 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01913 IPR017926 Glutamine amidotransferase CF65_01913 IPR022310 NAD/GMP synthase CF65_01913 IPR022955 GMP synthase CF65_01913 IPR029062 Class I glutamine amidotransferase-like CF65_01914 IPR004386 Toxin-antitoxin system, YafQ-like toxin CF65_01914 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CF65_01914 IPR035093 CF65_01914 CF65_01915 IPR007337 RelB antitoxin/Antitoxin DinJ CF65_01915 IPR013321 Arc-type ribbon-helix-helix CF65_01915 IPR026262 Antitoxin DinJ CF65_01918 IPR004669 C4-dicarboxylate anaerobic carrier CF65_01918 IPR018385 C4-dicarboxylate anaerobic carrier-like CF65_01919 IPR003728 Ribosome maturation factor RimP CF65_01919 IPR028989 Ribosome maturation factor RimP, N-terminal CF65_01919 IPR028998 Ribosome maturation factor RimP, C-terminal CF65_01919 IPR035956 CF65_01919 CF65_01919 IPR036847 CF65_01919 CF65_01920 IPR009019 K homology domain, prokaryotic type CF65_01920 IPR010213 Transcription termination factor NusA CF65_01920 IPR010214 Transcription termination factor NusA, C-terminal duplication CF65_01920 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CF65_01920 IPR012340 Nucleic acid-binding, OB-fold CF65_01920 IPR013735 Transcription factor NusA, N-terminal CF65_01920 IPR015946 K homology domain-like, alpha/beta CF65_01920 IPR022967 RNA-binding domain, S1 CF65_01920 IPR025249 KH domain, NusA-like CF65_01920 IPR030842 CF65_01920 CF65_01920 IPR036555 CF65_01920 CF65_01922 IPR000178 Translation initiation factor aIF-2, bacterial-like CF65_01922 IPR000795 Elongation factor, GTP-binding domain CF65_01922 IPR005225 Small GTP-binding protein domain CF65_01922 IPR006847 Translation initiation factor IF-2, N-terminal CF65_01922 IPR009000 Translation protein, beta-barrel domain CF65_01922 IPR013575 Initiation factor 2 associated domain, bacterial CF65_01922 IPR023115 Translation initiation factor IF- 2, domain 3 CF65_01922 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01922 IPR036925 CF65_01922 CF65_01923 IPR001091 Restriction/modification DNA-methylase CF65_01923 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_01923 IPR002941 DNA methylase N-4/N-6 CF65_01923 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01925 IPR006935 Helicase/UvrB domain CF65_01925 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01928 IPR000330 SNF2-related CF65_01928 IPR001650 Helicase, C-terminal CF65_01928 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01928 IPR038718 CF65_01928 CF65_01930 IPR000238 Ribosome-binding factor A CF65_01930 IPR015946 K homology domain-like, alpha/beta CF65_01930 IPR020053 Ribosome-binding factor A, conserved site CF65_01930 IPR023799 Ribosome-binding factor A domain CF65_01932 IPR002501 Pseudouridine synthase II CF65_01932 IPR014780 tRNA pseudouridine synthase II, TruB CF65_01932 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal CF65_01932 IPR015947 PUA-like domain CF65_01932 IPR020103 Pseudouridine synthase, catalytic domain CF65_01932 IPR032819 CF65_01932 CF65_01932 IPR036974 CF65_01932 CF65_01934 IPR029033 Histidine phosphatase superfamily CF65_01936 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_01936 IPR002305 Aminoacyl-tRNA synthetase, class Ic CF65_01936 IPR002307 Tyrosine-tRNA ligase CF65_01936 IPR002942 RNA-binding S4 domain CF65_01936 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01936 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 CF65_01936 IPR036986 CF65_01936 CF65_01937 IPR005224 Sugar fermentation stimulation protein CF65_01938 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CF65_01938 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CF65_01938 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CF65_01938 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CF65_01938 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CF65_01938 IPR026255 NAD(P) transhydrogenase, alpha subunit CF65_01938 IPR036291 CF65_01938 CF65_01939 IPR012136 NADP transhydrogenase, beta subunit CF65_01939 IPR029035 DHS-like NAD/FAD-binding domain CF65_01939 IPR034300 CF65_01939 CF65_01944 IPR003812 Fido domain CF65_01944 IPR036597 CF65_01944 CF65_01945 IPR004536 Selenide water dikinase CF65_01945 IPR010918 AIR synthase-related protein, C-terminal domain CF65_01945 IPR016188 PurM, N-terminal-like CF65_01945 IPR023061 Selenide, water dikinase, class I CF65_01945 IPR036676 CF65_01945 CF65_01945 IPR036921 CF65_01945 CF65_01947 IPR003439 ABC transporter-like CF65_01947 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01947 IPR017871 ABC transporter, conserved site CF65_01947 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01948 IPR000515 MetI-like domain CF65_01948 IPR035906 CF65_01948 CF65_01950 IPR000515 MetI-like domain CF65_01950 IPR035906 CF65_01950 CF65_01952 IPR006059 Bacterial extracellular solute-binding, family 1 CF65_01954 IPR000305 GIY-YIG nuclease superfamily CF65_01954 IPR001162 UvrC family homology region CF65_01954 IPR001943 UVR domain CF65_01954 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CF65_01954 IPR004791 UvrABC system, subunit C CF65_01954 IPR010994 RuvA domain 2-like CF65_01954 IPR035901 CF65_01954 CF65_01954 IPR036876 CF65_01954 CF65_01954 IPR038476 CF65_01954 CF65_01956 IPR003329 Acylneuraminate cytidylyltransferase CF65_01956 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CF65_01956 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01957 IPR005651 Uncharacterised protein family UPF0434/Trm112 CF65_01957 IPR038053 CF65_01957 CF65_01959 IPR003758 Tetraacyldisaccharide 4'-kinase CF65_01959 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01961 IPR003439 ABC transporter-like CF65_01961 IPR003593 AAA+ ATPase domain CF65_01961 IPR011527 ABC transporter type 1, transmembrane domain CF65_01961 IPR011917 ABC transporter, lipid A export, MsbA CF65_01961 IPR017871 ABC transporter, conserved site CF65_01961 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01961 IPR036640 CF65_01961 CF65_01962 IPR001279 Beta-lactamase-like CF65_01962 IPR004477 ComEC/Rec2-related protein CF65_01962 IPR004797 Competence protein ComEC/Rec2 CF65_01962 IPR025405 Domain of unknown function DUF4131 CF65_01962 IPR036866 CF65_01962 CF65_01963 IPR000962 Zinc finger, DksA/TraR C4-type CF65_01963 IPR012784 RNA polymerase-binding transcription factor DksA CF65_01963 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CF65_01963 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CF65_01963 IPR037187 CF65_01963 CF65_01965 IPR002646 Poly A polymerase, head domain CF65_01965 IPR010206 Poly(A) polymerase I CF65_01965 IPR025866 Polymerase A arginine-rich C-terminal domain CF65_01965 IPR032828 CF65_01965 CF65_01966 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CF65_01966 IPR035907 CF65_01966 CF65_01972 IPR002505 Phosphate acetyl/butaryl transferase CF65_01972 IPR004614 Phosphate acetyltransferase CF65_01972 IPR010766 DRTGG CF65_01972 IPR016475 Phosphate acetyltransferase, bacteria CF65_01972 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01972 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like CF65_01973 IPR000890 Aliphatic acid kinase, short-chain CF65_01973 IPR004372 Acetate/Proprionate kinase CF65_01973 IPR023865 Aliphatic acid kinase, short-chain, conserved site CF65_01974 IPR007334 Uncharacterised protein family UPF0208 CF65_01976 IPR003825 Colicin V production, CvpA CF65_01981 IPR003385 Glycoside hydrolase, family 77 CF65_01981 IPR017853 Glycoside hydrolase, superfamily CF65_01982 IPR000811 Glycosyl transferase, family 35 CF65_01982 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CF65_01982 IPR035090 CF65_01982 CF65_01983 IPR000792 Transcription regulator LuxR, C-terminal CF65_01983 IPR011990 Tetratricopeptide-like helical domain CF65_01983 IPR016032 Signal transduction response regulator, C-terminal effector CF65_01983 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01983 IPR036388 CF65_01983 CF65_01984 IPR004537 Tellurite resistance methyltransferase, TehB CF65_01984 IPR014431 Tellurite resistance methyltransferase, TehB type-2 CF65_01984 IPR014710 RmlC-like jelly roll fold CF65_01984 IPR015392 Domain of unknown function DUF1971 CF65_01984 IPR015985 Tellurite resistance methyltransferase TehB-like domain CF65_01984 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_01985 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type CF65_01985 IPR005474 Transketolase, N-terminal CF65_01985 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CF65_01985 IPR029061 Thiamin diphosphate-binding fold CF65_01986 IPR000089 Biotin/lipoyl attachment CF65_01986 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CF65_01986 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CF65_01986 IPR004167 E3 binding CF65_01986 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex CF65_01986 IPR011053 Single hybrid motif CF65_01986 IPR023213 Chloramphenicol acetyltransferase-like domain CF65_01986 IPR036625 CF65_01986 CF65_01988 IPR001100 CF65_01988 CF65_01988 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF65_01988 IPR006258 Dihydrolipoamide dehydrogenase CF65_01988 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CF65_01988 IPR016156 FAD/NAD-linked reductase, dimerisation domain CF65_01988 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CF65_01988 IPR036188 CF65_01988 CF65_01991 IPR000415 Nitroreductase-like CF65_01991 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CF65_01991 IPR029479 Nitroreductase CF65_01992 IPR002142 Peptidase S49 CF65_01992 IPR004634 Peptidase S49, protease IV CF65_01992 IPR004635 Peptidase S49, SppA CF65_01992 IPR029045 ClpP/crotonase-like domain CF65_01994 IPR002701 Chorismate mutase CF65_01994 IPR036263 CF65_01994 CF65_01994 IPR036979 CF65_01994 CF65_01995 IPR036263 CF65_01995 CF65_01996 IPR003099 Prephenate dehydrogenase CF65_01996 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CF65_01996 IPR036291 CF65_01996 CF65_01997 IPR006070 YrdC-like domain CF65_01997 IPR017945 DHBP synthase RibB-like alpha/beta domain CF65_01998 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CF65_01998 IPR002942 RNA-binding S4 domain CF65_01998 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CF65_01998 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CF65_01998 IPR020103 Pseudouridine synthase, catalytic domain CF65_01998 IPR036986 CF65_01998 CF65_01999 IPR000847 Transcription regulator HTH, LysR CF65_01999 IPR005119 LysR, substrate-binding CF65_01999 IPR036388 CF65_01999 CF65_01999 IPR036390 CF65_01999 CF65_02000 IPR001451 Bacterial transferase hexapeptide repeat CF65_02000 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family CF65_02000 IPR011004 Trimeric LpxA-like CF65_02000 IPR018357 Hexapeptide transferase, conserved site CF65_02000 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 CF65_02000 IPR037133 CF65_02000 CF65_02001 IPR007376 dsDNA mimic, putative CF65_02001 IPR036763 CF65_02001 CF65_02003 IPR000843 Transcription regulator HTH, LacI CF65_02003 IPR010982 Lambda repressor-like, DNA-binding domain CF65_02003 IPR023588 Transcription regulator HTH, PurR CF65_02003 IPR028082 Periplasmic binding protein-like I CF65_02004 IPR000073 Alpha/beta hydrolase fold-1 CF65_02004 IPR008220 Homoserine acetyltransferase CF65_02004 IPR029058 Alpha/Beta hydrolase fold CF65_02005 IPR003848 Domain of unknown function DUF218 CF65_02006 IPR000843 Transcription regulator HTH, LacI CF65_02006 IPR010982 Lambda repressor-like, DNA-binding domain CF65_02006 IPR025997 Periplasmic binding protein domain CF65_02006 IPR028082 Periplasmic binding protein-like I CF65_02008 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_02010 IPR013740 Redoxin CF65_02010 IPR036249 CF65_02010 CF65_02011 IPR003834 Cytochrome c assembly protein, transmembrane domain CF65_02012 IPR002569 Peptide methionine sulphoxide reductase MsrA CF65_02012 IPR002579 Peptide methionine sulphoxide reductase MrsB CF65_02012 IPR011057 Mss4-like CF65_02012 IPR036509 CF65_02012 CF65_02013 IPR001765 Carbonic anhydrase CF65_02013 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CF65_02013 IPR036874 CF65_02013 CF65_02014 IPR007055 BON domain CF65_02014 IPR014004 Transport-associated and nodulation domain, bacteria CF65_02015 IPR001347 Sugar isomerase (SIS) CF65_02017 IPR003509 Uncharacterised protein family UPF0102 CF65_02017 IPR011335 Restriction endonuclease type II-like CF65_02017 IPR011856 tRNA endonuclease-like domain CF65_02018 IPR007443 Penicillin-binding protein activator LpoA CF65_02018 IPR011990 Tetratricopeptide-like helical domain CF65_02018 IPR028082 Periplasmic binding protein-like I CF65_02020 IPR000878 Tetrapyrrole methylase CF65_02020 IPR008189 rRNA small subunit methyltransferase I CF65_02020 IPR014776 Tetrapyrrole methylase, subdomain 2 CF65_02020 IPR014777 Tetrapyrrole methylase, subdomain 1 CF65_02020 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CF65_02020 IPR035996 CF65_02020 CF65_02021 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CF65_02021 IPR006076 FAD dependent oxidoreductase CF65_02021 IPR031656 CF65_02021 CF65_02021 IPR036188 CF65_02021 CF65_02021 IPR038299 CF65_02021 CF65_02023 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CF65_02023 IPR036188 CF65_02023 CF65_02024 IPR003680 Flavodoxin-like fold CF65_02024 IPR023048 NADH-azoreductase, FMN-dependent CF65_02024 IPR029039 Flavoprotein-like CF65_02026 IPR002142 Peptidase S49 CF65_02026 IPR013703 Peptidase S49, N-terminal proteobacteria CF65_02026 IPR029045 ClpP/crotonase-like domain CF65_02027 IPR006664 Outer membrane protein, bacterial CF65_02027 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CF65_02027 IPR007450 Lipoprotein SmpA/OmlA CF65_02027 IPR036737 CF65_02027 CF65_02027 IPR037873 CF65_02027 CF65_02028 IPR011009 Protein kinase-like domain CF65_02028 IPR016477 Fructosamine/Ketosamine-3-kinase CF65_02030 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CF65_02030 IPR002320 Threonine-tRNA ligase, class IIa CF65_02030 IPR004095 TGS CF65_02030 IPR004154 Anticodon-binding CF65_02030 IPR012675 Beta-grasp domain CF65_02030 IPR012676 TGS-like CF65_02030 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CF65_02030 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain CF65_02030 IPR036621 CF65_02030 CF65_02031 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_02031 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_02034 IPR001221 Phenol hydroxylase reductase CF65_02034 IPR001433 Oxidoreductase FAD/NAD(P)-binding CF65_02034 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CF65_02034 IPR008333 Oxidoreductase, FAD-binding domain CF65_02034 IPR017938 Riboflavin synthase-like beta-barrel CF65_02034 IPR039261 CF65_02034 CF65_02035 IPR001288 Translation initiation factor 3 CF65_02035 IPR019813 Translation initiation factor 3, conserved site CF65_02035 IPR019814 Translation initiation factor 3, N-terminal CF65_02035 IPR019815 Translation initiation factor 3, C-terminal CF65_02035 IPR036787 CF65_02035 CF65_02035 IPR036788 CF65_02035 CF65_02038 IPR001706 Ribosomal protein L35, non-mitochondrial CF65_02038 IPR018265 Ribosomal protein L35, conserved site CF65_02038 IPR021137 Ribosomal protein L35 CF65_02038 IPR037229 CF65_02038 CF65_02039 IPR005813 Ribosomal protein L20 CF65_02039 IPR035566 CF65_02039 CF65_02040 IPR002686 Transposase IS200-like CF65_02040 IPR036515 CF65_02040 CF65_02042 IPR002915 DeoC/FbaB/ lacD aldolase CF65_02042 IPR005927 Tagatose 1,6-diphosphate aldolase CF65_02042 IPR013785 Aldolase-type TIM barrel CF65_02043 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ CF65_02043 IPR013785 Aldolase-type TIM barrel CF65_02044 IPR002178 PTS EIIA type-2 domain CF65_02044 IPR016152 Phosphotransferase/anion transporter CF65_02045 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CF65_02045 IPR036095 CF65_02045 CF65_02046 IPR004703 Phosphotransferase system, sugar-specific permease component CF65_02046 IPR013853 Galactitol permease IIC component CF65_02047 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CF65_02047 IPR011032 GroES (chaperonin 10)-like CF65_02047 IPR013149 Alcohol dehydrogenase, C-terminal CF65_02047 IPR013154 Alcohol dehydrogenase GroES-like CF65_02047 IPR036291 CF65_02047 CF65_02048 IPR001034 HTH DeoR N-terminal domain CF65_02048 IPR014036 DeoR C-terminal sensor domain CF65_02048 IPR036388 CF65_02048 CF65_02048 IPR036390 CF65_02048 CF65_02048 IPR037171 CF65_02048 CF65_02050 IPR005474 Transketolase, N-terminal CF65_02050 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02050 IPR005477 Deoxyxylulose-5-phosphate synthase CF65_02050 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CF65_02050 IPR020826 Transketolase binding site CF65_02050 IPR029061 Thiamin diphosphate-binding fold CF65_02050 IPR033248 CF65_02050 CF65_02051 IPR000092 Polyprenyl synthetase CF65_02051 IPR008949 Terpenoid synthase CF65_02051 IPR033749 CF65_02051 CF65_02052 IPR003761 Exonuclease VII, small subunit CF65_02052 IPR037004 CF65_02052 CF65_02053 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CF65_02053 IPR029045 ClpP/crotonase-like domain CF65_02053 IPR034733 CF65_02053 CF65_02056 IPR001645 Folylpolyglutamate synthetase CF65_02056 IPR013221 Mur ligase, central CF65_02056 IPR018109 Folylpolyglutamate synthetase, conserved site CF65_02056 IPR036565 CF65_02056 CF65_02056 IPR036615 CF65_02056 CF65_02057 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_02057 IPR029033 Histidine phosphatase superfamily CF65_02060 IPR001736 Phospholipase D/Transphosphatidylase CF65_02060 IPR022924 Cardiolipin synthase CF65_02060 IPR025202 Phospholipase D-like domain CF65_02060 IPR027379 Cardiolipin synthase N-terminal CF65_02060 IPR030840 CF65_02060 CF65_02062 IPR005642 Protein of unknown function DUF340, prokaryotic membrane CF65_02063 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CF65_02063 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CF65_02063 IPR006508 Pseudouridine synthase, RluA-like CF65_02063 IPR020103 Pseudouridine synthase, catalytic domain CF65_02067 IPR000620 Drug/metabolite transporter CF65_02069 IPR004624 PhnA protein CF65_02069 IPR013987 PhnA protein, N-terminal CF65_02069 IPR013988 PhnA protein, C-terminal CF65_02071 IPR011646 KAP P-loop CF65_02071 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02072 IPR003314 Transposase MuA/Repressor CI, DNA-binding CF65_02072 IPR009061 DNA binding domain, putative CF65_02072 IPR036388 CF65_02072 CF65_02075 IPR029058 Alpha/Beta hydrolase fold CF65_02076 IPR029058 Alpha/Beta hydrolase fold CF65_02077 IPR003423 Outer membrane efflux protein CF65_02077 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CF65_02080 IPR003439 ABC transporter-like CF65_02080 IPR003593 AAA+ ATPase domain CF65_02080 IPR003838 Permease FtsX-like CF65_02080 IPR017871 ABC transporter, conserved site CF65_02080 IPR025857 MacB-like periplasmic core domain CF65_02080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02081 IPR006143 RND efflux pump, membrane fusion protein CF65_02081 IPR032317 CF65_02081 CF65_02082 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CF65_02082 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_02082 IPR004514 Glutamine-tRNA synthetase CF65_02082 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain CF65_02082 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02082 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain CF65_02082 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CF65_02082 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain CF65_02082 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain CF65_02082 IPR022861 Glutamine-tRNA ligase, bacterial CF65_02084 IPR008228 Uncharacterised conserved protein UCP006173 CF65_02087 IPR004193 Glycoside hydrolase, family 13, N-terminal CF65_02087 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CF65_02087 IPR006048 Alpha-amylase, C-terminal all beta CF65_02087 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CF65_02087 IPR013780 Glycosyl hydrolase, family 13, all-beta CF65_02087 IPR013783 Immunoglobulin-like fold CF65_02087 IPR014756 Immunoglobulin E-set CF65_02087 IPR017853 Glycoside hydrolase, superfamily CF65_02087 IPR037439 CF65_02087 CF65_02088 IPR004193 Glycoside hydrolase, family 13, N-terminal CF65_02088 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CF65_02088 IPR013783 Immunoglobulin-like fold CF65_02088 IPR014756 Immunoglobulin E-set CF65_02088 IPR017853 Glycoside hydrolase, superfamily CF65_02089 IPR013780 Glycosyl hydrolase, family 13, all-beta CF65_02089 IPR017853 Glycoside hydrolase, superfamily CF65_02090 IPR005835 Nucleotidyl transferase CF65_02090 IPR005836 ADP-glucose pyrophosphorylase, conserved site CF65_02090 IPR011004 Trimeric LpxA-like CF65_02090 IPR011831 Glucose-1-phosphate adenylyltransferase CF65_02090 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial CF65_02090 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02092 IPR001296 Glycosyl transferase, family 1 CF65_02092 IPR011835 Glycogen/starch synthase, ADP-glucose type CF65_02092 IPR013534 Starch synthase, catalytic domain CF65_02094 IPR000811 Glycosyl transferase, family 35 CF65_02094 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CF65_02094 IPR035090 CF65_02094 CF65_02097 IPR032816 CF65_02097 CF65_02099 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain CF65_02099 IPR020055 Ribosomal protein L25, short-form CF65_02099 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain CF65_02099 IPR029751 Ribosomal protein L25 CF65_02101 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CF65_02101 IPR012338 Beta-lactamase/transpeptidase-like CF65_02103 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CF65_02103 IPR012338 Beta-lactamase/transpeptidase-like CF65_02103 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CF65_02105 IPR005582 Chromosome partition protein MukF CF65_02105 IPR033439 CF65_02105 CF65_02105 IPR033440 CF65_02105 CF65_02105 IPR033441 CF65_02105 CF65_02105 IPR036141 CF65_02105 CF65_02105 IPR036388 CF65_02105 CF65_02105 IPR036390 CF65_02105 CF65_02105 IPR038198 CF65_02105 CF65_02108 IPR000873 AMP-dependent synthetase/ligase CF65_02108 IPR002123 Phospholipid/glycerol acyltransferase CF65_02108 IPR011701 Major facilitator superfamily CF65_02108 IPR020845 AMP-binding, conserved site CF65_02108 IPR036259 CF65_02108 CF65_02109 IPR025110 AMP-binding enzyme C-terminal domain CF65_02111 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE CF65_02112 IPR007406 MukB, N-terminal domain CF65_02112 IPR012090 Chromosome partition protein MukB CF65_02112 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02112 IPR032520 CF65_02112 CF65_02113 IPR000620 Drug/metabolite transporter CF65_02114 IPR012337 Ribonuclease H-like domain CF65_02114 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_02114 IPR013620 Exonuclease C-terminal CF65_02114 IPR023607 Exodeoxyribonuclease I CF65_02114 IPR036397 CF65_02114 CF65_02114 IPR038649 CF65_02114 CF65_02117 IPR001584 Integrase, catalytic core CF65_02117 IPR012337 Ribonuclease H-like domain CF65_02120 IPR008331 Ferritin/DPS protein domain CF65_02120 IPR009078 Ferritin-like superfamily CF65_02120 IPR012347 Ferritin-related CF65_02121 IPR008331 Ferritin/DPS protein domain CF65_02121 IPR009078 Ferritin-like superfamily CF65_02121 IPR012347 Ferritin-related CF65_02124 IPR000595 Cyclic nucleotide-binding domain CF65_02124 IPR012318 Helix-turn-helix motif, Crp-type CF65_02124 IPR014710 RmlC-like jelly roll fold CF65_02124 IPR018335 Transcription regulator HTH, Crp-type, conserved site CF65_02124 IPR018490 Cyclic nucleotide-binding-like CF65_02124 IPR036388 CF65_02124 CF65_02124 IPR036390 CF65_02124 CF65_02125 IPR006015 Universal stress protein A CF65_02125 IPR006016 UspA CF65_02126 IPR019613 Protein of unknown function DUF4198 CF65_02128 IPR003601 DNA topoisomerase, type IA, domain 2 CF65_02128 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CF65_02128 IPR005733 DNA topoisomerase I, bacterial-type CF65_02128 IPR006171 Toprim domain CF65_02128 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type CF65_02128 IPR013497 DNA topoisomerase, type IA, central CF65_02128 IPR013498 DNA topoisomerase, type IA, zn finger CF65_02128 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CF65_02128 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CF65_02128 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CF65_02128 IPR023405 DNA topoisomerase, type IA, core domain CF65_02128 IPR023406 DNA topoisomerase, type IA, active site CF65_02128 IPR028612 DNA topoisomerase I, type IA CF65_02131 IPR003141 Polymerase/histidinol phosphatase, N-terminal CF65_02131 IPR004013 PHP, C-terminal CF65_02131 IPR016195 Polymerase/histidinol phosphatase-like CF65_02132 IPR001295 Dihydroorotate dehydrogenase, conserved site CF65_02132 IPR005719 Dihydroorotate dehydrogenase, class 2 CF65_02132 IPR005720 Dihydroorotate dehydrogenase domain CF65_02132 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CF65_02132 IPR013785 Aldolase-type TIM barrel CF65_02134 IPR012779 Peptidase M1, alanyl aminopeptidase CF65_02134 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal CF65_02134 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CF65_02134 IPR027268 CF65_02134 CF65_02134 IPR035414 CF65_02134 CF65_02134 IPR037144 CF65_02134 CF65_02134 IPR038438 CF65_02134 CF65_02136 IPR000796 Aspartate/other aminotransferase CF65_02136 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CF65_02136 IPR004839 Aminotransferase, class I/classII CF65_02136 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_02136 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_02136 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02137 IPR001647 DNA-binding HTH domain, TetR-type CF65_02137 IPR009057 Homeodomain-like CF65_02139 IPR039562 CF65_02139 CF65_02140 IPR003439 ABC transporter-like CF65_02140 IPR003593 AAA+ ATPase domain CF65_02140 IPR017871 ABC transporter, conserved site CF65_02140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02142 IPR003423 Outer membrane efflux protein CF65_02142 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CF65_02144 IPR000522 ABC transporter, permease protein CF65_02144 IPR037294 CF65_02144 CF65_02146 IPR003439 ABC transporter-like CF65_02146 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02149 IPR003314 Transposase MuA/Repressor CI, DNA-binding CF65_02149 IPR009061 DNA binding domain, putative CF65_02149 IPR036388 CF65_02149 CF65_02150 IPR010982 Lambda repressor-like, DNA-binding domain CF65_02150 IPR038722 CF65_02150 CF65_02151 IPR012910 TonB-dependent receptor, plug CF65_02151 IPR036942 CF65_02151 CF65_02151 IPR037066 CF65_02151 CF65_02152 IPR003439 ABC transporter-like CF65_02152 IPR003593 AAA+ ATPase domain CF65_02152 IPR017871 ABC transporter, conserved site CF65_02152 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02153 IPR000522 ABC transporter, permease protein CF65_02153 IPR037294 CF65_02153 CF65_02154 IPR002491 ABC transporter periplasmic binding domain CF65_02157 IPR012910 TonB-dependent receptor, plug CF65_02157 IPR036942 CF65_02157 CF65_02158 IPR000531 TonB-dependent receptor, beta-barrel CF65_02158 IPR036942 CF65_02158 CF65_02159 IPR032808 CF65_02159 CF65_02160 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase CF65_02160 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA CF65_02160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02160 IPR035107 CF65_02160 CF65_02162 IPR000064 Endopeptidase, NLPC/P60 domain CF65_02162 IPR038765 CF65_02162 CF65_02163 IPR000119 Histone-like bacterial DNA-binding protein CF65_02163 IPR005684 Integration host factor, alpha subunit CF65_02163 IPR010992 Integration host factor (IHF)-like DNA-binding domain CF65_02163 IPR020816 Histone-like DNA-binding protein, conserved site CF65_02164 IPR002547 tRNA-binding domain CF65_02164 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CF65_02164 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding CF65_02164 IPR005146 B3/B4 tRNA-binding domain CF65_02164 IPR005147 tRNA synthetase, B5-domain CF65_02164 IPR009061 DNA binding domain, putative CF65_02164 IPR012340 Nucleic acid-binding, OB-fold CF65_02164 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CF65_02164 IPR036690 CF65_02164 CF65_02166 IPR002319 Phenylalanyl-tRNA synthetase CF65_02166 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CF65_02166 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CF65_02166 IPR010978 tRNA-binding arm CF65_02166 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CF65_02168 IPR001915 Peptidase M48 CF65_02168 IPR022919 Peptidase M48, protease HtpX, putative CF65_02171 IPR000644 CBS domain CF65_02171 IPR001347 Sugar isomerase (SIS) CF65_02171 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CF65_02172 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CF65_02172 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase CF65_02172 IPR023214 HAD-like domain CF65_02172 IPR036412 CF65_02172 CF65_02173 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial CF65_02173 IPR005801 ADC synthase CF65_02173 IPR006805 Anthranilate synthase component I, N-terminal CF65_02173 IPR015890 Chorismate binding, C-terminal CF65_02173 IPR019999 Anthranilate synthase component I - like CF65_02175 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CF65_02175 IPR017926 Glutamine amidotransferase CF65_02175 IPR029062 Class I glutamine amidotransferase-like CF65_02177 IPR014347 Tautomerase/MIF superfamily CF65_02177 IPR037479 CF65_02177 CF65_02179 IPR000312 Glycosyl transferase, family 3 CF65_02179 IPR005940 Anthranilate phosphoribosyl transferase CF65_02179 IPR017459 Glycosyl transferase family 3, N-terminal domain CF65_02179 IPR035902 CF65_02179 CF65_02179 IPR036320 CF65_02179 CF65_02180 IPR007711 Plasmid maintenance system killer CF65_02180 IPR035093 CF65_02180 CF65_02181 IPR001387 Cro/C1-type helix-turn-helix domain CF65_02181 IPR010982 Lambda repressor-like, DNA-binding domain CF65_02181 IPR013430 Toxin-antitoxin system, antidote protein, HigA CF65_02182 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CF65_02182 IPR011060 Ribulose-phosphate binding barrel CF65_02182 IPR013785 Aldolase-type TIM barrel CF65_02182 IPR013798 Indole-3-glycerol phosphate synthase CF65_02184 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain CF65_02184 IPR011060 Ribulose-phosphate binding barrel CF65_02184 IPR013785 Aldolase-type TIM barrel CF65_02190 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CF65_02190 IPR019812 Hydrogenase assembly chaperone, conserved site CF65_02190 IPR037254 CF65_02190 CF65_02193 IPR005899 Sodium ion-translocating decarboxylase CF65_02193 IPR023424 Oxaloacetate decarboxylase gamma chain, probable CF65_02195 IPR000089 Biotin/lipoyl attachment CF65_02195 IPR000891 Pyruvate carboxyltransferase CF65_02195 IPR001882 Biotin-binding site CF65_02195 IPR003379 Carboxylase, conserved domain CF65_02195 IPR005776 Oxaloacetate decarboxylase, alpha subunit CF65_02195 IPR011053 Single hybrid motif CF65_02195 IPR013785 Aldolase-type TIM barrel CF65_02196 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit CF65_02201 IPR000531 TonB-dependent receptor, beta-barrel CF65_02201 IPR010917 TonB-dependent receptor, conserved site CF65_02201 IPR010948 TonB-dependent lactoferrin/transferrin receptor CF65_02201 IPR036942 CF65_02201 CF65_02202 IPR012910 TonB-dependent receptor, plug CF65_02202 IPR037066 CF65_02202 CF65_02205 IPR002347 Glucose/ribitol dehydrogenase CF65_02205 IPR020904 Short-chain dehydrogenase/reductase, conserved site CF65_02205 IPR036291 CF65_02205 CF65_02206 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_02206 IPR006653 Tryptophan synthase, beta chain, conserved site CF65_02206 IPR006654 Tryptophan synthase, beta chain CF65_02206 IPR023026 Tryptophan synthase beta chain/beta chain-like CF65_02206 IPR036052 CF65_02206 CF65_02208 IPR002028 Tryptophan synthase, alpha chain CF65_02208 IPR011060 Ribulose-phosphate binding barrel CF65_02208 IPR013785 Aldolase-type TIM barrel CF65_02208 IPR018204 Tryptophan synthase, alpha chain, active site CF65_02210 IPR000788 Ribonucleotide reductase large subunit, C-terminal CF65_02210 IPR013350 Ribonucleotide reductase alpha chain CF65_02212 IPR000358 Ribonucleotide reductase small subunit CF65_02212 IPR009078 Ferritin-like superfamily CF65_02212 IPR012348 Ribonucleotide reductase-related CF65_02214 IPR001697 Pyruvate kinase CF65_02214 IPR011037 Pyruvate kinase-like, insert domain CF65_02214 IPR015793 Pyruvate kinase, barrel CF65_02214 IPR015795 Pyruvate kinase, C-terminal CF65_02214 IPR015806 Pyruvate kinase, beta-barrel insert domain CF65_02214 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CF65_02214 IPR018209 Pyruvate kinase, active site CF65_02214 IPR036918 CF65_02214 CF65_02215 IPR007138 Antibiotic biosynthesis monooxygenase-like domain CF65_02215 IPR011008 Dimeric alpha-beta barrel CF65_02217 IPR002915 DeoC/FbaB/ lacD aldolase CF65_02217 IPR013785 Aldolase-type TIM barrel CF65_02218 IPR013785 Aldolase-type TIM barrel CF65_02219 IPR025997 Periplasmic binding protein domain CF65_02219 IPR028082 Periplasmic binding protein-like I CF65_02220 IPR001851 ABC transporter, permease CF65_02224 IPR001851 ABC transporter, permease CF65_02225 IPR003439 ABC transporter-like CF65_02225 IPR003593 AAA+ ATPase domain CF65_02225 IPR017871 ABC transporter, conserved site CF65_02225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02226 IPR003439 ABC transporter-like CF65_02226 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02228 IPR007324 Sugar-binding domain, putative CF65_02228 IPR036388 CF65_02228 CF65_02228 IPR037171 CF65_02228 CF65_02230 IPR000577 CF65_02230 CF65_02230 IPR018484 Carbohydrate kinase, FGGY, N-terminal CF65_02230 IPR018485 Carbohydrate kinase, FGGY, C-terminal CF65_02231 IPR004472 Dethiobiotin synthase BioD CF65_02231 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02232 IPR000600 ROK CF65_02232 IPR036388 CF65_02232 CF65_02232 IPR036390 CF65_02232 CF65_02233 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CF65_02233 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CF65_02233 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CF65_02233 IPR004522 Asparagine-tRNA ligase CF65_02233 IPR012340 Nucleic acid-binding, OB-fold CF65_02235 IPR007481 Stringent starvation protein B CF65_02235 IPR036760 CF65_02235 CF65_02236 IPR004045 Glutathione S-transferase, N-terminal CF65_02236 IPR004046 Glutathione S-transferase, C-terminal CF65_02236 IPR036249 CF65_02236 CF65_02236 IPR036282 CF65_02236 CF65_02237 IPR003448 Molybdopterin biosynthesis MoaE CF65_02237 IPR036563 CF65_02237 CF65_02239 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CF65_02239 IPR012675 Beta-grasp domain CF65_02239 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CF65_02241 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CF65_02241 IPR023045 Molybdenum cofactor biosynthesis C CF65_02241 IPR036522 CF65_02241 CF65_02242 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CF65_02242 IPR006638 Elongator protein 3/MiaB/NifB CF65_02242 IPR007197 Radical SAM CF65_02242 IPR010505 Molybdenum cofactor synthesis C-terminal CF65_02242 IPR013483 Molybdenum cofactor biosynthesis protein A CF65_02242 IPR013785 Aldolase-type TIM barrel CF65_02243 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CF65_02243 IPR010119 Gluconeogenesis factor CF65_02243 IPR038136 CF65_02243 CF65_02244 IPR003812 Fido domain CF65_02244 IPR011204 Virulence protein RhuM-like CF65_02244 IPR036597 CF65_02244 CF65_02246 IPR005320 Peptidase S51 CF65_02246 IPR029062 Class I glutamine amidotransferase-like CF65_02249 IPR003720 tRNA sulfurtransferase ThiI CF65_02249 IPR004114 THUMP CF65_02249 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02249 IPR020536 Thil, AANH domain CF65_02249 IPR026340 Thiazole biosynthesis domain CF65_02249 IPR036873 CF65_02249 CF65_02250 IPR005126 NapC/NirT cytochrome c, N-terminal CF65_02250 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK CF65_02250 IPR036280 CF65_02250 CF65_02250 IPR036909 CF65_02250 CF65_02250 IPR038266 CF65_02250 CF65_02251 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CF65_02251 IPR006656 Molybdopterin oxidoreductase CF65_02251 IPR006657 Molydopterin dinucleotide-binding domain CF65_02251 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase CF65_02251 IPR009010 Aspartate decarboxylase-like domain CF65_02251 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CF65_02252 IPR007351 Uncharacterised protein YjbR CF65_02252 IPR038056 CF65_02252 CF65_02254 IPR001898 Sodium/sulphate symporter CF65_02254 IPR030676 CF65_02254 CF65_02257 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CF65_02257 IPR036165 CF65_02257 CF65_02259 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CF65_02259 IPR035093 CF65_02259 CF65_02260 IPR001406 Pseudouridine synthase I, TruA CF65_02260 IPR020095 Pseudouridine synthase I, TruA, C-terminal CF65_02260 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CF65_02260 IPR020103 Pseudouridine synthase, catalytic domain CF65_02261 IPR000754 Ribosomal protein S9 CF65_02261 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02261 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02261 IPR020574 Ribosomal protein S9, conserved site CF65_02261 IPR023035 Ribosomal protein S9, bacterial/plastid CF65_02262 IPR005822 Ribosomal protein L13 CF65_02262 IPR005823 Ribosomal protein L13, bacterial-type CF65_02262 IPR023563 Ribosomal protein L13, conserved site CF65_02262 IPR036899 CF65_02262 CF65_02263 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_02265 IPR003593 AAA+ ATPase domain CF65_02265 IPR006344 Exodeoxyribonuclease V, alpha subunit CF65_02265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02265 IPR027785 UvrD-like helicase C-terminal domain CF65_02266 IPR004586 Exodeoxyribonuclease V, beta subunit CF65_02266 IPR011335 Restriction endonuclease type II-like CF65_02266 IPR011604 Exonuclease, phage-type/RecB, C-terminal CF65_02266 IPR014017 DNA helicase, UvrD-like, C-terminal CF65_02266 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02266 IPR034739 CF65_02266 CF65_02266 IPR038726 CF65_02266 CF65_02267 IPR003787 Sulphur relay, DsrE/F-like protein CF65_02267 IPR027396 DsrEFH-like CF65_02269 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA CF65_02269 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CF65_02269 IPR029069 HotDog domain CF65_02270 IPR008269 Peptidase S16, Lon C-terminal CF65_02270 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02270 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02272 IPR009390 Macrodomain Ter protein, MatP CF65_02272 IPR013321 Arc-type ribbon-helix-helix CF65_02272 IPR035087 CF65_02272 CF65_02272 IPR035375 CF65_02272 CF65_02272 IPR038339 CF65_02272 CF65_02273 IPR002059 Cold-shock protein, DNA-binding CF65_02273 IPR011129 Cold shock protein CF65_02273 IPR012156 Cold shock, CspA CF65_02273 IPR012340 Nucleic acid-binding, OB-fold CF65_02273 IPR012751 CspD, cold shock CF65_02273 IPR019844 Cold-shock conserved site CF65_02275 IPR005371 Uncharacterised protein family UPF0181 CF65_02276 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CF65_02276 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CF65_02276 IPR020103 Pseudouridine synthase, catalytic domain CF65_02278 IPR007384 Protein of unknown function UCP006257 CF65_02278 IPR023376 YqcC-like domain CF65_02278 IPR036814 CF65_02278 CF65_02279 IPR016908 Uncharacterised conserved protein UCP029037 CF65_02280 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 CF65_02280 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal CF65_02280 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CF65_02281 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02282 IPR001789 Signal transduction response regulator, receiver domain CF65_02282 IPR002078 RNA polymerase sigma factor 54 interaction domain CF65_02282 IPR011006 CheY-like superfamily CF65_02283 IPR001789 Signal transduction response regulator, receiver domain CF65_02283 IPR011006 CheY-like superfamily CF65_02284 IPR003594 Histidine kinase-like ATPase, C-terminal domain CF65_02284 IPR017116 Signal transduction histidine kinase, PgtB CF65_02284 IPR036097 CF65_02284 CF65_02284 IPR036890 CF65_02284 CF65_02286 IPR008995 Molybdate/tungstate binding, C-terminal CF65_02286 IPR013611 Transport-associated OB, type 2 CF65_02288 IPR007411 Protein of unknown function DUF462 CF65_02289 IPR000642 Peptidase M41 CF65_02289 IPR003593 AAA+ ATPase domain CF65_02289 IPR003959 ATPase, AAA-type, core CF65_02289 IPR003960 ATPase, AAA-type, conserved site CF65_02289 IPR005936 Peptidase, FtsH CF65_02289 IPR011546 Peptidase M41, FtsH extracellular CF65_02289 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02289 IPR037219 CF65_02289 CF65_02290 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CF65_02290 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria CF65_02290 IPR015507 Ribosomal RNA large subunit methyltransferase E CF65_02290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_02291 IPR002376 Formyl transferase, N-terminal CF65_02291 IPR004810 Formyltetrahydrofolate deformylase CF65_02291 IPR036477 CF65_02291 CF65_02292 IPR001801 Histone-like protein H-NS CF65_02292 IPR027444 Histone-like protein H-NS, C-terminal domain CF65_02292 IPR027454 Histone-like protein H-NS family, oligomerisation domain CF65_02292 IPR037150 CF65_02292 CF65_02294 IPR018461 Na+/H+ antiporter, NhaC-like CF65_02300 IPR001920 Asp/Glu racemase CF65_02300 IPR004391 Glutamate racemase CF65_02300 IPR015942 Asp/Glu/hydantoin racemase CF65_02300 IPR018187 Asp/Glu racemase, active site CF65_02300 IPR033134 CF65_02300 CF65_02301 IPR007440 Chorismate--pyruvate lyase CF65_02301 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CF65_02303 IPR001650 Helicase, C-terminal CF65_02303 IPR004609 ATP-dependent DNA helicase RecG CF65_02303 IPR011545 DEAD/DEAH box helicase domain CF65_02303 IPR012340 Nucleic acid-binding, OB-fold CF65_02303 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CF65_02303 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02303 IPR033454 CF65_02303 CF65_02305 IPR002912 ACT domain CF65_02305 IPR003607 HD/PDEase domain CF65_02305 IPR004095 TGS CF65_02305 IPR004811 RelA/SpoT family CF65_02305 IPR007685 RelA/SpoT CF65_02305 IPR012675 Beta-grasp domain CF65_02305 IPR012676 TGS-like CF65_02306 IPR003716 DNA-directed RNA polymerase, omega subunit CF65_02306 IPR006110 RNA polymerase, subunit omega/K/RPB6 CF65_02306 IPR012293 RNA polymerase subunit, RPB6/omega CF65_02306 IPR036161 CF65_02306 CF65_02307 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CF65_02307 IPR017665 Guanylate kinase CF65_02307 IPR020590 Guanylate kinase, conserved site CF65_02307 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02309 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CF65_02309 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CF65_02309 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CF65_02309 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CF65_02309 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CF65_02309 IPR036291 CF65_02309 CF65_02310 IPR000620 Drug/metabolite transporter CF65_02312 IPR005031 Streptomyces cyclase/dehydrase CF65_02312 IPR023393 START-like domain CF65_02313 IPR005346 RnfH protein CF65_02313 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CF65_02313 IPR037021 CF65_02313 CF65_02315 IPR003347 JmjC domain CF65_02316 IPR003753 Exonuclease VII, large subunit CF65_02316 IPR020579 Exonuclease VII, large subunit, C-terminal CF65_02316 IPR025824 OB-fold nucleic acid binding domain CF65_02317 IPR005337 ATPase, P-loop-containing CF65_02317 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02319 IPR002178 PTS EIIA type-2 domain CF65_02319 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN CF65_02319 IPR016152 Phosphotransferase/anion transporter CF65_02320 IPR003439 ABC transporter-like CF65_02320 IPR003593 AAA+ ATPase domain CF65_02320 IPR017871 ABC transporter, conserved site CF65_02320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02320 IPR030921 CF65_02320 CF65_02320 IPR032823 CF65_02320 CF65_02321 IPR005653 Organic solvent tolerance-like, N-terminal CF65_02321 IPR014340 Lipopolysaccharide assembly, LptA CF65_02323 IPR010664 Lipopolysaccharide assembly, LptC-related CF65_02323 IPR026265 Lipopolysaccharide export system protein LptC CF65_02324 IPR003439 ABC transporter-like CF65_02324 IPR003593 AAA+ ATPase domain CF65_02324 IPR017871 ABC transporter, conserved site CF65_02324 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02325 IPR003453 Permease domain CF65_02325 IPR030802 CF65_02325 CF65_02326 IPR003399 Mammalian cell entry-related CF65_02326 IPR030970 CF65_02326 CF65_02327 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CF65_02328 IPR002645 STAS domain CF65_02328 IPR036513 CF65_02328 CF65_02329 IPR002634 BolA protein CF65_02329 IPR036065 CF65_02329 CF65_02330 IPR001986 Enolpyruvate transferase domain CF65_02330 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CF65_02330 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CF65_02330 IPR036968 CF65_02330 CF65_02331 IPR003439 ABC transporter-like CF65_02331 IPR003593 AAA+ ATPase domain CF65_02331 IPR017871 ABC transporter, conserved site CF65_02331 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02331 IPR036640 CF65_02331 CF65_02332 IPR001173 Glycosyltransferase 2-like CF65_02332 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02333 IPR005272 Conserved hypothetical protein CHP00743 CF65_02333 IPR035571 CF65_02333 CF65_02334 IPR005017 Membrane protein, aromatic hydrocarbon degradation CF65_02335 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CF65_02335 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CF65_02335 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CF65_02335 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CF65_02335 IPR036217 CF65_02335 CF65_02335 IPR036388 CF65_02335 CF65_02335 IPR036631 CF65_02335 CF65_02337 IPR004230 DNA mismatch repair protein MutH CF65_02337 IPR011335 Restriction endonuclease type II-like CF65_02337 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II CF65_02337 IPR037057 CF65_02337 CF65_02338 IPR005496 Integral membrane protein TerC CF65_02342 IPR001584 Integrase, catalytic core CF65_02342 IPR012337 Ribonuclease H-like domain CF65_02343 IPR001637 Glutamine synthetase class-I, adenylation site CF65_02343 IPR004809 Glutamine synthetase type I CF65_02343 IPR008146 Glutamine synthetase, catalytic domain CF65_02343 IPR008147 Glutamine synthetase, beta-Grasp CF65_02343 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CF65_02343 IPR027302 Glutamine synthetase, N-terminal conserved site CF65_02343 IPR027303 Glutamine synthetase, glycine-rich site CF65_02343 IPR036651 CF65_02343 CF65_02344 IPR000640 Translation elongation factor EFG, V domain CF65_02344 IPR000795 Elongation factor, GTP-binding domain CF65_02344 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CF65_02344 IPR005225 Small GTP-binding protein domain CF65_02344 IPR006298 GTP-binding protein TypA CF65_02344 IPR009000 Translation protein, beta-barrel domain CF65_02344 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02344 IPR031157 CF65_02344 CF65_02344 IPR035647 CF65_02344 CF65_02347 IPR036709 CF65_02347 CF65_02348 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CF65_02348 IPR024706 Peroxiredoxin, AhpC-type CF65_02348 IPR036249 CF65_02348 CF65_02349 IPR002220 DapA-like CF65_02349 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CF65_02349 IPR013785 Aldolase-type TIM barrel CF65_02349 IPR020624 Dihydrodipicolinate synthetase, conserved site CF65_02349 IPR020625 Dihydrodipicolinate synthetase, active site CF65_02350 IPR010653 Lipoprotein, NlpB CF65_02351 IPR010653 Lipoprotein, NlpB CF65_02352 IPR000515 MetI-like domain CF65_02352 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CF65_02352 IPR035906 CF65_02352 CF65_02353 IPR003439 ABC transporter-like CF65_02353 IPR003593 AAA+ ATPase domain CF65_02353 IPR017871 ABC transporter, conserved site CF65_02353 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02354 IPR001608 Alanine racemase, N-terminal CF65_02354 IPR011078 Uncharacterised protein family UPF0001 CF65_02354 IPR029066 PLP-binding barrel CF65_02355 IPR007229 Nicotinate phosphoribosyltransferase family CF65_02355 IPR013785 Aldolase-type TIM barrel CF65_02355 IPR016471 Nicotinamide phosphoribosyl transferase CF65_02355 IPR036068 CF65_02355 CF65_02357 IPR001048 Aspartate/glutamate/uridylate kinase CF65_02357 IPR001341 Aspartate kinase domain CF65_02357 IPR001342 Homoserine dehydrogenase, catalytic CF65_02357 IPR002912 ACT domain CF65_02357 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CF65_02357 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I CF65_02357 IPR018042 Aspartate kinase, conserved site CF65_02357 IPR019811 Homoserine dehydrogenase, conserved site CF65_02357 IPR027795 GATS-like ACT domain CF65_02357 IPR036291 CF65_02357 CF65_02357 IPR036393 CF65_02357 CF65_02358 IPR000870 Homoserine kinase CF65_02358 IPR006203 GHMP kinase, ATP-binding, conserved site CF65_02358 IPR006204 GHMP kinase N-terminal domain CF65_02358 IPR013750 GHMP kinase, C-terminal domain CF65_02358 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02358 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02358 IPR036554 CF65_02358 CF65_02360 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CF65_02360 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_02360 IPR004450 Threonine synthase-like CF65_02360 IPR029144 Threonine synthase, N-terminal CF65_02360 IPR036052 CF65_02360 CF65_02360 IPR037158 CF65_02360 CF65_02362 IPR008278 4'-phosphopantetheinyl transferase superfamily CF65_02362 IPR037143 CF65_02362 CF65_02363 IPR001107 Band 7 protein CF65_02363 IPR001972 Stomatin family CF65_02363 IPR010201 HflK CF65_02363 IPR020980 Menbrane protein HflK, N-terminal CF65_02363 IPR036013 CF65_02363 CF65_02365 IPR001107 Band 7 protein CF65_02365 IPR010200 HflC CF65_02365 IPR036013 CF65_02365 CF65_02367 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CF65_02367 IPR010994 RuvA domain 2-like CF65_02368 IPR002637 Ham1-like protein CF65_02368 IPR020922 Non-canonical purine NTP pyrophosphatase CF65_02368 IPR029001 Inosine triphosphate pyrophosphatase-like CF65_02369 IPR002765 Uncharacterised protein family UPF0145 CF65_02369 IPR035439 CF65_02369 CF65_02371 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related CF65_02371 IPR006638 Elongator protein 3/MiaB/NifB CF65_02371 IPR007197 Radical SAM CF65_02371 IPR010723 HemN, C-terminal domain CF65_02371 IPR023404 Radical SAM, alpha/beta horseshoe CF65_02374 IPR004788 Ribose 5-phosphate isomerase, type A CF65_02374 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CF65_02374 IPR037171 CF65_02374 CF65_02375 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF65_02375 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CF65_02375 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CF65_02375 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CF65_02375 IPR036291 CF65_02375 CF65_02380 IPR002491 ABC transporter periplasmic binding domain CF65_02381 IPR000887 KDPG/KHG aldolase CF65_02381 IPR013785 Aldolase-type TIM barrel CF65_02381 IPR031337 CF65_02381 CF65_02381 IPR031338 CF65_02381 CF65_02382 IPR003766 Uronate isomerase CF65_02382 IPR032466 CF65_02382 CF65_02383 IPR002347 Glucose/ribitol dehydrogenase CF65_02383 IPR020904 Short-chain dehydrogenase/reductase, conserved site CF65_02383 IPR036291 CF65_02383 CF65_02384 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CF65_02384 IPR011611 Carbohydrate kinase PfkB CF65_02384 IPR029056 Ribokinase-like CF65_02385 IPR004682 TRAP dicarboxylate transporter CF65_02385 IPR018389 Bacterial extracellular solute-binding protein, family 7 CF65_02385 IPR038404 CF65_02385 CF65_02387 IPR004681 TRAP transporter permease protein CF65_02387 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CF65_02388 IPR000322 Glycoside hydrolase, family 31 CF65_02388 IPR011013 Galactose mutarotase-like domain CF65_02388 IPR013780 Glycosyl hydrolase, family 13, all-beta CF65_02388 IPR017853 Glycoside hydrolase, superfamily CF65_02388 IPR025887 Glycoside hydrolase family 31, N-terminal domain CF65_02388 IPR032513 CF65_02388 CF65_02388 IPR033403 CF65_02388 CF65_02389 IPR000524 Transcription regulator HTH, GntR CF65_02389 IPR008920 Transcription regulator FadR/GntR, C-terminal CF65_02389 IPR011711 GntR, C-terminal CF65_02389 IPR036388 CF65_02389 CF65_02389 IPR036390 CF65_02389 CF65_02390 IPR004628 Mannonate dehydratase CF65_02390 IPR036237 CF65_02390 CF65_02392 IPR000620 Drug/metabolite transporter CF65_02393 IPR001902 Sulphate anion transporter CF65_02393 IPR002645 STAS domain CF65_02393 IPR011547 Sulphate transporter CF65_02393 IPR036513 CF65_02393 CF65_02395 IPR003111 Peptidase S16, lon N-terminal CF65_02395 IPR003593 AAA+ ATPase domain CF65_02395 IPR003959 ATPase, AAA-type, core CF65_02395 IPR004815 Lon protease, bacterial/eukaryotic-type CF65_02395 IPR008268 Peptidase S16, active site CF65_02395 IPR008269 Peptidase S16, Lon C-terminal CF65_02395 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02395 IPR015947 PUA-like domain CF65_02395 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02395 IPR027543 Lon protease, bacterial CF65_02397 IPR000943 RNA polymerase sigma-70 CF65_02397 IPR007127 RNA polymerase sigma factor 70, region 1.1 CF65_02397 IPR007624 RNA polymerase sigma-70 region 3 CF65_02397 IPR007627 RNA polymerase sigma-70 region 2 CF65_02397 IPR007630 RNA polymerase sigma-70 region 4 CF65_02397 IPR007631 RNA polymerase sigma factor 70, non-essential domain CF65_02397 IPR009042 RNA polymerase sigma-70 region 1.2 CF65_02397 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CF65_02397 IPR013324 RNA polymerase sigma factor, region 3/4 CF65_02397 IPR013325 RNA polymerase sigma factor, region 2 CF65_02397 IPR014284 RNA polymerase sigma-70 like domain CF65_02397 IPR028630 RNA polymerase sigma factor RpoD CF65_02397 IPR036388 CF65_02397 CF65_02398 IPR002694 Zinc finger, CHC2-type CF65_02398 IPR006171 Toprim domain CF65_02398 IPR006295 DNA primase, DnaG CF65_02398 IPR013173 DNA primase DnaG, DnaB-binding domain CF65_02398 IPR013264 DNA primase, catalytic core, N-terminal CF65_02398 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CF65_02398 IPR019475 DNA primase, DnaB-helicase binding domain CF65_02398 IPR030846 CF65_02398 CF65_02398 IPR036977 CF65_02398 CF65_02398 IPR037068 CF65_02398 CF65_02399 IPR001911 Ribosomal protein S21 CF65_02399 IPR018278 Ribosomal protein S21, conserved site CF65_02399 IPR038380 CF65_02399 CF65_02402 IPR000905 Gcp-like domain CF65_02402 IPR017860 Peptidase M22, conserved site CF65_02402 IPR017861 Kae1/YgjD family CF65_02402 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CF65_02407 IPR001267 Thymidine kinase CF65_02407 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02409 IPR001357 BRCT domain CF65_02409 IPR001679 NAD-dependent DNA ligase CF65_02409 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CF65_02409 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CF65_02409 IPR004150 NAD-dependent DNA ligase, OB-fold CF65_02409 IPR010994 RuvA domain 2-like CF65_02409 IPR012340 Nucleic acid-binding, OB-fold CF65_02409 IPR013839 NAD-dependent DNA ligase, adenylation CF65_02409 IPR013840 NAD-dependent DNA ligase, N-terminal CF65_02409 IPR018239 NAD-dependent DNA ligase, active site CF65_02409 IPR033136 CF65_02409 CF65_02409 IPR036420 CF65_02409 CF65_02410 IPR007449 ZipA, C-terminal FtsZ-binding domain CF65_02410 IPR011919 Cell division protein ZipA CF65_02410 IPR036765 CF65_02410 CF65_02411 IPR022985 CysZ, gammaproteobacteria CF65_02412 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CF65_02412 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_02412 IPR005856 Cysteine synthase K/M CF65_02412 IPR005859 Cysteine synthase A CF65_02412 IPR036052 CF65_02412 CF65_02416 IPR005122 Uracil-DNA glycosylase-like CF65_02416 IPR036895 CF65_02416 CF65_02417 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CF65_02417 IPR006073 GTP binding domain CF65_02417 IPR012675 Beta-grasp domain CF65_02417 IPR012676 TGS-like CF65_02417 IPR013029 Domain of unknown function DUF933 CF65_02417 IPR023192 TGS-like domain CF65_02417 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02418 IPR001328 Peptidyl-tRNA hydrolase CF65_02418 IPR018171 Peptidyl-tRNA hydrolase, conserved site CF65_02418 IPR036416 CF65_02418 CF65_02423 IPR000715 Glycosyl transferase, family 4 CF65_02423 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase CF65_02423 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CF65_02425 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CF65_02425 IPR005814 Aminotransferase class-III CF65_02425 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_02425 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_02425 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02426 IPR003607 HD/PDEase domain CF65_02426 IPR005105 Protein-PII uridylyltransferase, N-terminal CF65_02426 IPR006674 HD domain CF65_02426 IPR010043 Protein-PII uridylyltransferase CF65_02426 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CF65_02429 IPR000994 Peptidase M24, structural domain CF65_02429 IPR001714 Peptidase M24, methionine aminopeptidase CF65_02429 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CF65_02429 IPR036005 CF65_02429 CF65_02430 IPR000361 FeS cluster biogenesis CF65_02430 IPR016092 FeS cluster insertion protein CF65_02430 IPR017870 FeS cluster insertion, C-terminal, conserved site CF65_02430 IPR023063 Iron-sulfur cluster insertion protein ErpA CF65_02430 IPR035903 CF65_02430 CF65_02431 IPR008249 Uncharacterised protein family UPF0231 CF65_02432 IPR001264 Glycosyl transferase, family 51 CF65_02432 IPR001460 Penicillin-binding protein, transpeptidase CF65_02432 IPR011813 Penicillin-binding protein 1B CF65_02432 IPR012338 Beta-lactamase/transpeptidase-like CF65_02432 IPR023346 Lysozyme-like domain CF65_02432 IPR028166 Bifunctional transglycosylase second domain CF65_02432 IPR036950 CF65_02432 CF65_02434 IPR004923 Iron permease FTR1/Fip1/EfeU CF65_02436 IPR018470 Periplasmic metal-binding protein Tp34-type CF65_02436 IPR038482 CF65_02436 CF65_02437 IPR007029 YHS domain CF65_02437 IPR018758 Domain of unknown function DUF2318, membrane CF65_02438 IPR003838 Permease FtsX-like CF65_02438 IPR025857 MacB-like periplasmic core domain CF65_02439 IPR003838 Permease FtsX-like CF65_02439 IPR025857 MacB-like periplasmic core domain CF65_02440 IPR003439 ABC transporter-like CF65_02440 IPR003593 AAA+ ATPase domain CF65_02440 IPR017871 ABC transporter, conserved site CF65_02440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02442 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CF65_02442 IPR036249 CF65_02442 CF65_02446 IPR006439 HAD hydrolase, subfamily IA CF65_02446 IPR023198 Phosphoglycolate phosphatase, domain 2 CF65_02446 IPR023214 HAD-like domain CF65_02446 IPR036412 CF65_02446 CF65_02450 IPR002559 Transposase, IS4-like CF65_02450 IPR012337 Ribonuclease H-like domain CF65_02454 IPR001650 Helicase, C-terminal CF65_02454 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site CF65_02454 IPR003593 AAA+ ATPase domain CF65_02454 IPR007502 Helicase-associated domain CF65_02454 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type CF65_02454 IPR011545 DEAD/DEAH box helicase domain CF65_02454 IPR011709 Domain of unknown function DUF1605 CF65_02454 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CF65_02454 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal CF65_02454 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02455 IPR006696 Protein of unknown function DUF423 CF65_02456 IPR007382 Uncharacterised protein family UPF0756, transmembrame CF65_02457 IPR002109 Glutaredoxin CF65_02457 IPR004480 Monothiol glutaredoxin-related CF65_02457 IPR014434 Monothiol glutaredoxin CF65_02457 IPR036249 CF65_02457 CF65_02458 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain CF65_02458 IPR002368 Outer membrane protein, OmpA CF65_02458 IPR006664 Outer membrane protein, bacterial CF65_02458 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CF65_02458 IPR006690 Outer membrane protein, OmpA-like, conserved site CF65_02458 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CF65_02458 IPR036737 CF65_02458 CF65_02459 IPR004113 FAD-linked oxidase, C-terminal CF65_02459 IPR006094 FAD linked oxidase, N-terminal CF65_02459 IPR009051 Alpha-helical ferredoxin CF65_02459 IPR016164 FAD-linked oxidase-like, C-terminal CF65_02459 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02459 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02459 IPR036318 CF65_02459 CF65_02460 IPR003736 Phenylacetic acid degradation-related domain CF65_02460 IPR006683 Thioesterase superfamily CF65_02460 IPR029069 HotDog domain CF65_02461 IPR001015 Ferrochelatase CF65_02461 IPR019772 Ferrochelatase, active site CF65_02462 IPR002065 Putative thiol peroxidase Tpx CF65_02462 IPR013740 Redoxin CF65_02462 IPR018219 Thiol peroxidase conserved site CF65_02462 IPR036249 CF65_02462 CF65_02463 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CF65_02463 IPR006680 Amidohydrolase 1 CF65_02463 IPR011059 Metal-dependent hydrolase, composite domain CF65_02463 IPR032466 CF65_02463 CF65_02465 IPR004547 Glucosamine-6-phosphate isomerase CF65_02465 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CF65_02465 IPR018321 Glucosamine-6-phosphate isomerase, conserved site CF65_02465 IPR037171 CF65_02465 CF65_02466 IPR002220 DapA-like CF65_02466 IPR005264 N-acetylneuraminate lyase CF65_02466 IPR013785 Aldolase-type TIM barrel CF65_02466 IPR020624 Dihydrodipicolinate synthetase, conserved site CF65_02466 IPR020625 Dihydrodipicolinate synthetase, active site CF65_02468 IPR000281 Helix-turn-helix protein RpiR CF65_02468 IPR001347 Sugar isomerase (SIS) CF65_02468 IPR009057 Homeodomain-like CF65_02468 IPR036388 CF65_02468 CF65_02470 IPR000600 ROK CF65_02470 IPR023945 N-acetylmannosamine kinase, bacterial CF65_02472 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase CF65_02472 IPR011060 Ribulose-phosphate binding barrel CF65_02472 IPR013785 Aldolase-type TIM barrel CF65_02473 IPR004682 TRAP dicarboxylate transporter CF65_02473 IPR018389 Bacterial extracellular solute-binding protein, family 7 CF65_02473 IPR038404 CF65_02473 CF65_02474 IPR004681 TRAP transporter permease protein CF65_02474 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CF65_02474 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CF65_02476 IPR006652 Kelch repeat type 1 CF65_02476 IPR015915 Kelch-type beta propeller CF65_02476 IPR019936 Mutatrotase, YjhT-like CF65_02477 IPR003352 Phosphotransferase system, EIIC CF65_02478 IPR001996 Phosphotransferase system, IIB component, type 1 CF65_02478 IPR003352 Phosphotransferase system, EIIC CF65_02478 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CF65_02478 IPR036878 CF65_02478 CF65_02479 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain CF65_02479 IPR002368 Outer membrane protein, OmpA CF65_02479 IPR006664 Outer membrane protein, bacterial CF65_02479 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CF65_02479 IPR006690 Outer membrane protein, OmpA-like, conserved site CF65_02479 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CF65_02479 IPR036737 CF65_02479 CF65_02480 IPR001650 Helicase, C-terminal CF65_02480 IPR001943 UVR domain CF65_02480 IPR004807 UvrABC system, subunit B CF65_02480 IPR006935 Helicase/UvrB domain CF65_02480 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CF65_02480 IPR024759 UvrB, YAD/RRR-motif-containing domain CF65_02480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02480 IPR036876 CF65_02480 CF65_02481 IPR011541 Nickel/cobalt transporter, high-affinity CF65_02482 IPR010412 Protein of unknown function DUF1007 CF65_02482 IPR016537 Uncharacterised conserved protein UCP008159, CF65_02484 IPR003439 ABC transporter-like CF65_02484 IPR003593 AAA+ ATPase domain CF65_02484 IPR017871 ABC transporter, conserved site CF65_02484 IPR022374 ABC transporter, ATP-binding protein, ChvD CF65_02484 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02484 IPR032781 CF65_02484 CF65_02485 IPR005594 YadA-like, C-terminal CF65_02485 IPR008378 Ubiquitous surface protein CF65_02486 IPR001241 DNA topoisomerase, type IIA CF65_02486 IPR002288 DNA gyrase B subunit, C-terminal CF65_02486 IPR003594 Histidine kinase-like ATPase, C-terminal domain CF65_02486 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative CF65_02486 IPR006171 Toprim domain CF65_02486 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CF65_02486 IPR013759 DNA topoisomerase, type IIA, central domain CF65_02486 IPR013760 DNA topoisomerase, type IIA-like domain CF65_02486 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02486 IPR018522 DNA topoisomerase, type IIA, conserved site CF65_02486 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02486 IPR036890 CF65_02486 CF65_02491 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CF65_02491 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative CF65_02491 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel CF65_02491 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain CF65_02491 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CF65_02491 IPR013760 DNA topoisomerase, type IIA-like domain CF65_02491 IPR035516 CF65_02491 CF65_02492 IPR004045 Glutathione S-transferase, N-terminal CF65_02492 IPR004046 Glutathione S-transferase, C-terminal CF65_02492 IPR036249 CF65_02492 CF65_02492 IPR036282 CF65_02492 CF65_02493 IPR006597 Sel1-like CF65_02493 IPR011990 Tetratricopeptide-like helical domain CF65_02494 IPR025576 YwiC-like protein CF65_02495 IPR006175 YjgF/Yer057p/UK114 family CF65_02495 IPR019897 YjgF-like protein, conserved site CF65_02495 IPR035959 CF65_02495 CF65_02499 IPR001173 Glycosyltransferase 2-like CF65_02499 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02500 IPR005135 Endonuclease/exonuclease/phosphatase CF65_02500 IPR036691 CF65_02500 CF65_02501 IPR003593 AAA+ ATPase domain CF65_02501 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CF65_02501 IPR012763 DNA polymerase III, subunit gamma/ tau CF65_02501 IPR021029 DNA polymerase III, tau subunit, domain V CF65_02501 IPR022754 DNA polymerase III, gamma subunit, domain III CF65_02501 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02501 IPR038249 CF65_02501 CF65_02502 IPR000836 Phosphoribosyltransferase domain CF65_02502 IPR005764 Adenine phosphoribosyl transferase CF65_02502 IPR029057 Phosphoribosyltransferase-like CF65_02504 IPR004960 Bacterial lipid A biosynthesis acyltransferase CF65_02504 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase CF65_02506 IPR002781 Transmembrane protein TauE like CF65_02507 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase CF65_02507 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CF65_02509 IPR000453 Chorismate synthase CF65_02509 IPR020541 Chorismate synthase, conserved site CF65_02509 IPR035904 CF65_02509 CF65_02511 IPR006685 Mechanosensitive ion channel MscS CF65_02511 IPR006686 Mechanosensitive ion channel MscS, conserved site CF65_02511 IPR010920 Like-Sm (LSM) domain CF65_02511 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CF65_02511 IPR011066 Mechanosensitive ion channel MscS, C-terminal CF65_02511 IPR023408 CF65_02511 CF65_02511 IPR024393 Mechanosensitive ion channel MscS, porin domain CF65_02511 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CF65_02512 IPR000873 AMP-dependent synthetase/ligase CF65_02512 IPR010192 2-succinylbenzoate--CoA ligase CF65_02512 IPR020845 AMP-binding, conserved site CF65_02513 IPR005621 Regulation modulator SeqA CF65_02513 IPR010985 Ribbon-helix-helix CF65_02513 IPR013321 Arc-type ribbon-helix-helix CF65_02513 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain CF65_02513 IPR033761 CF65_02513 CF65_02513 IPR036835 CF65_02513 CF65_02514 IPR000073 Alpha/beta hydrolase fold-1 CF65_02514 IPR029058 Alpha/Beta hydrolase fold CF65_02515 IPR001226 Flavodoxin, conserved site CF65_02515 IPR008254 Flavodoxin/nitric oxide synthase CF65_02515 IPR010086 Flavodoxin, long chain CF65_02515 IPR029039 Flavoprotein-like CF65_02516 IPR002481 Ferric-uptake regulator CF65_02516 IPR036388 CF65_02516 CF65_02516 IPR036390 CF65_02516 CF65_02519 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CF65_02519 IPR005743 DNA gyrase, subunit A CF65_02519 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel CF65_02519 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain CF65_02519 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CF65_02519 IPR013760 DNA topoisomerase, type IIA-like domain CF65_02519 IPR035516 CF65_02519 CF65_02521 IPR007360 Invasion gene expression up-regulator, SirB CF65_02523 IPR001950 Translation initiation factor SUI1 CF65_02523 IPR005872 Archaeal/bacterial translation initiation factor SUI1 CF65_02523 IPR036877 CF65_02523 CF65_02524 IPR001754 Orotidine 5'-phosphate decarboxylase domain CF65_02524 IPR011060 Ribulose-phosphate binding barrel CF65_02524 IPR013785 Aldolase-type TIM barrel CF65_02524 IPR014732 Orotidine 5'-phosphate decarboxylase CF65_02524 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CF65_02525 IPR011990 Tetratricopeptide-like helical domain CF65_02525 IPR030865 CF65_02525 CF65_02526 IPR010445 Protein of unknown function DUF1049 CF65_02526 IPR032906 CF65_02526 CF65_02527 IPR000119 Histone-like bacterial DNA-binding protein CF65_02527 IPR005685 Integration host factor, beta subunit CF65_02527 IPR010992 Integration host factor (IHF)-like DNA-binding domain CF65_02527 IPR020816 Histone-like DNA-binding protein, conserved site CF65_02528 IPR000110 Ribosomal protein S1 CF65_02528 IPR003029 Ribosomal protein S1, RNA-binding domain CF65_02528 IPR012340 Nucleic acid-binding, OB-fold CF65_02528 IPR022967 RNA-binding domain, S1 CF65_02529 IPR003136 Cytidylate kinase CF65_02529 IPR011994 Cytidylate kinase domain CF65_02529 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02531 IPR007488 Protein of unknown function DUF535 CF65_02532 IPR012910 TonB-dependent receptor, plug CF65_02532 IPR036942 CF65_02532 CF65_02532 IPR037066 CF65_02532 CF65_02533 IPR001431 Peptidase M16, zinc-binding site CF65_02533 IPR007863 Peptidase M16, C-terminal domain CF65_02533 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CF65_02533 IPR011765 Peptidase M16, N-terminal CF65_02534 IPR007863 Peptidase M16, C-terminal domain CF65_02534 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CF65_02536 IPR008407 Branched-chain amino acid transport, AzlD CF65_02538 IPR011606 Branched-chain amino acid transport, permease CF65_02539 IPR000847 Transcription regulator HTH, LysR CF65_02539 IPR005119 LysR, substrate-binding CF65_02539 IPR036388 CF65_02539 CF65_02539 IPR036390 CF65_02539 CF65_02540 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CF65_02540 IPR006276 Cobalamin-independent methionine synthase CF65_02540 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CF65_02540 IPR038071 CF65_02540 CF65_02541 IPR006935 Helicase/UvrB domain CF65_02541 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02543 IPR009362 Protein of unknown function DUF1016 CF65_02544 IPR000330 SNF2-related CF65_02544 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CF65_02544 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02544 IPR038718 CF65_02544 CF65_02547 IPR006214 Bax inhibitor 1-related CF65_02548 IPR007453 Sulphur transfer protein DsrC/TusE CF65_02548 IPR025526 DsrC-like domain CF65_02549 IPR006127 Periplasmic solute binding protein family CF65_02549 IPR006128 Adhesion lipoprotein CF65_02549 IPR006129 Adhesin B CF65_02550 IPR003439 ABC transporter-like CF65_02550 IPR003593 AAA+ ATPase domain CF65_02550 IPR017871 ABC transporter, conserved site CF65_02550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02551 IPR001626 ABC-3 CF65_02551 IPR037294 CF65_02551 CF65_02552 IPR001626 ABC-3 CF65_02552 IPR037294 CF65_02552 CF65_02553 IPR001792 Acylphosphatase-like domain CF65_02553 IPR017968 Acylphosphatase, conserved site CF65_02553 IPR036046 CF65_02553 CF65_02554 IPR018635 Uncharacterised protein family UPF0319 CF65_02556 IPR004363 Methylglyoxal synthase CF65_02556 IPR011607 Methylglyoxal synthase-like domain CF65_02556 IPR018148 Methylglyoxal synthase, active site CF65_02556 IPR036914 CF65_02556 CF65_02558 IPR005185 Protein of unknown function DUF307 CF65_02558 IPR031308 CF65_02558 CF65_02560 IPR010019 Integral membrane protein, YccS CF65_02560 IPR010020 Integral membrane protein, YccS/YhfK CF65_02560 IPR032692 CF65_02560 CF65_02561 IPR002625 Smr protein/MutS2 C-terminal CF65_02561 IPR022990 Uncharacterised protein family UPF0115 CF65_02561 IPR036063 CF65_02561 CF65_02562 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_02562 IPR004556 Modification methylase HemK CF65_02562 IPR007848 Methyltransferase small domain CF65_02562 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase CF65_02562 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_02563 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02563 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CF65_02563 IPR029061 Thiamin diphosphate-binding fold CF65_02563 IPR033248 CF65_02563 CF65_02565 IPR005474 Transketolase, N-terminal CF65_02565 IPR029061 Thiamin diphosphate-binding fold CF65_02566 IPR004703 Phosphotransferase system, sugar-specific permease component CF65_02567 IPR004703 Phosphotransferase system, sugar-specific permease component CF65_02568 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CF65_02568 IPR036095 CF65_02568 CF65_02570 IPR031709 CF65_02570 CF65_02573 IPR003439 ABC transporter-like CF65_02573 IPR003593 AAA+ ATPase domain CF65_02573 IPR017871 ABC transporter, conserved site CF65_02573 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02573 IPR032524 CF65_02573 CF65_02573 IPR032781 CF65_02573 CF65_02573 IPR037118 CF65_02573 CF65_02574 IPR003607 HD/PDEase domain CF65_02574 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase CF65_02574 IPR006674 HD domain CF65_02574 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 CF65_02574 IPR026875 Phosphohydrolase-associated domain CF65_02575 IPR005261 Conserved hypothetical protein CHP00659 CF65_02575 IPR007300 CidB/LrgB family CF65_02576 IPR005538 LrgA/CidA family CF65_02577 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CF65_02577 IPR035437 CF65_02577 CF65_02579 IPR000192 Aminotransferase class V domain CF65_02579 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_02579 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_02579 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02581 IPR003808 Fe-S metabolism associated domain, SufE-like CF65_02584 IPR004821 Cytidyltransferase-like domain CF65_02584 IPR011611 Carbohydrate kinase PfkB CF65_02584 IPR011914 RfaE bifunctional protein, domain II CF65_02584 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02584 IPR023030 Bifunctional protein HldE CF65_02584 IPR029056 Ribokinase-like CF65_02586 IPR004960 Bacterial lipid A biosynthesis acyltransferase CF65_02586 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CF65_02587 IPR026269 Tat proofreading chaperone DmsD-type CF65_02587 IPR036411 CF65_02587 CF65_02589 IPR003680 Flavodoxin-like fold CF65_02589 IPR029039 Flavoprotein-like CF65_02590 IPR002810 NfeD-like, C-terminal domain CF65_02591 IPR001107 Band 7 protein CF65_02591 IPR001972 Stomatin family CF65_02591 IPR018080 Band 7/stomatin-like, conserved site CF65_02591 IPR032435 CF65_02591 CF65_02591 IPR036013 CF65_02591 CF65_02592 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain CF65_02592 IPR013785 Aldolase-type TIM barrel CF65_02592 IPR017853 Glycoside hydrolase, superfamily CF65_02593 IPR005180 Domain of unknown function DUF302 CF65_02593 IPR035923 CF65_02593 CF65_02594 IPR007339 Protein of unknown function DUF417 CF65_02595 IPR004852 Di-haem cytochrome c peroxidase CF65_02595 IPR009056 Cytochrome c-like domain CF65_02595 IPR025992 Haem-binding domain CF65_02595 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CF65_02595 IPR036909 CF65_02595 CF65_02597 IPR002121 HRDC domain CF65_02597 IPR002562 3'-5' exonuclease domain CF65_02597 IPR006292 Ribonuclease D CF65_02597 IPR010997 HRDC-like CF65_02597 IPR012337 Ribonuclease H-like domain CF65_02597 IPR036397 CF65_02597 CF65_02598 IPR000873 AMP-dependent synthetase/ligase CF65_02598 IPR020845 AMP-binding, conserved site CF65_02598 IPR025110 AMP-binding enzyme C-terminal domain CF65_02599 IPR004658 Outer membrane lipoprotein Slp CF65_02600 IPR000905 Gcp-like domain CF65_02600 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ CF65_02601 IPR006555 ATP-dependent helicase, C-terminal CF65_02601 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02602 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CF65_02602 IPR011013 Galactose mutarotase-like domain CF65_02602 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CF65_02602 IPR025532 Glucose-6-phosphate 1-epimerase CF65_02603 IPR011990 Tetratricopeptide-like helical domain CF65_02603 IPR013766 Thioredoxin domain CF65_02603 IPR036249 CF65_02603 CF65_02604 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CF65_02604 IPR005982 Thioredoxin reductase CF65_02604 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CF65_02604 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CF65_02604 IPR036188 CF65_02604 CF65_02606 IPR003439 ABC transporter-like CF65_02606 IPR003593 AAA+ ATPase domain CF65_02606 IPR011527 ABC transporter type 1, transmembrane domain CF65_02606 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD CF65_02606 IPR017871 ABC transporter, conserved site CF65_02606 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02606 IPR036640 CF65_02606 CF65_02609 IPR003439 ABC transporter-like CF65_02609 IPR003593 AAA+ ATPase domain CF65_02609 IPR011527 ABC transporter type 1, transmembrane domain CF65_02609 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CF65_02609 IPR017871 ABC transporter, conserved site CF65_02609 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02609 IPR036640 CF65_02609 CF65_02610 IPR003703 Acyl-CoA thioesterase CF65_02610 IPR029069 HotDog domain CF65_02613 IPR011009 Protein kinase-like domain CF65_02615 IPR010835 Protein of unknown function DUF1439 CF65_02616 IPR000600 ROK CF65_02618 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CF65_02618 IPR036938 CF65_02618 CF65_02619 IPR000926 GTP cyclohydrolase II, RibA CF65_02619 IPR032677 CF65_02619 CF65_02619 IPR036144 CF65_02619 CF65_02623 IPR016040 NAD(P)-binding domain CF65_02623 IPR036291 CF65_02623 CF65_02626 IPR006506 Conserved hypothetical protein CHP01619 CF65_02626 IPR009671 Regulator of ribonuclease activity B domain CF65_02626 IPR016097 Domain of unknown function DUF695 CF65_02626 IPR036701 CF65_02626 CF65_02628 IPR004808 AP endonuclease 1 CF65_02628 IPR005135 Endonuclease/exonuclease/phosphatase CF65_02628 IPR020847 AP endonuclease 1, binding site CF65_02628 IPR020848 AP endonuclease 1, conserved site CF65_02628 IPR036691 CF65_02628 CF65_02631 IPR003362 Bacterial sugar transferase CF65_02631 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP CF65_02631 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CF65_02632 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02634 IPR001173 Glycosyltransferase 2-like CF65_02634 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02635 IPR019277 Protein of unknown function DUF2304 CF65_02636 IPR001173 Glycosyltransferase 2-like CF65_02636 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02637 IPR018674 Protein of unknown function DUF2142, membrane CF65_02638 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CF65_02638 IPR036291 CF65_02638 CF65_02640 IPR001173 Glycosyltransferase 2-like CF65_02640 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02642 IPR003439 ABC transporter-like CF65_02642 IPR003593 AAA+ ATPase domain CF65_02642 IPR017871 ABC transporter, conserved site CF65_02642 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02643 IPR000412 ABC-2 transporter CF65_02643 IPR013525 ABC-2 type transporter CF65_02644 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related CF65_02644 IPR011051 RmlC-like cupin domain CF65_02644 IPR014710 RmlC-like jelly roll fold CF65_02645 IPR005913 dTDP-4-dehydrorhamnose reductase CF65_02645 IPR029903 CF65_02645 CF65_02645 IPR036291 CF65_02645 CF65_02646 IPR005835 Nucleotidyl transferase CF65_02646 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CF65_02646 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02647 IPR005888 dTDP-glucose 4,6-dehydratase CF65_02647 IPR016040 NAD(P)-binding domain CF65_02647 IPR036291 CF65_02647 CF65_02648 IPR011970 Lytic murein transglycosylase CF65_02648 IPR023346 Lysozyme-like domain CF65_02648 IPR031304 CF65_02648 CF65_02649 IPR001173 Glycosyltransferase 2-like CF65_02649 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02651 IPR001173 Glycosyltransferase 2-like CF65_02651 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02654 IPR002654 Glycosyl transferase, family 25 CF65_02656 IPR007345 Polysaccharide pyruvyl transferase CF65_02657 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CF65_02657 IPR036165 CF65_02657 CF65_02658 IPR009614 Toxin YoeB CF65_02658 IPR035093 CF65_02658 CF65_02659 IPR003848 Domain of unknown function DUF218 CF65_02659 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02663 IPR012310 DNA ligase, ATP-dependent, central CF65_02663 IPR012340 Nucleic acid-binding, OB-fold CF65_02663 IPR016059 DNA ligase, ATP-dependent, conserved site CF65_02663 IPR029319 DNA ligase, OB-like domain CF65_02666 IPR005753 DNA helicase, ATP-dependent, UvrD type CF65_02666 IPR013986 DExx box DNA helicase domain CF65_02666 IPR014017 DNA helicase, UvrD-like, C-terminal CF65_02666 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02666 IPR034739 CF65_02666 CF65_02668 IPR003474 Gluconate transporter CF65_02671 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CF65_02671 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02671 IPR031322 CF65_02671 CF65_02673 IPR000843 Transcription regulator HTH, LacI CF65_02673 IPR010982 Lambda repressor-like, DNA-binding domain CF65_02673 IPR028082 Periplasmic binding protein-like I CF65_02674 IPR003786 Protein FdhD CF65_02674 IPR016193 Cytidine deaminase-like CF65_02675 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CF65_02676 IPR006443 Formate dehydrogenase, alpha subunit, anaerobic CF65_02676 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CF65_02676 IPR006656 Molybdopterin oxidoreductase CF65_02676 IPR006657 Molydopterin dinucleotide-binding domain CF65_02676 IPR009010 Aspartate decarboxylase-like domain CF65_02677 IPR006470 Formate dehydrogenase, beta subunit CF65_02677 IPR014603 Formate dehydrogenase, iron-sulphur subunit CF65_02677 IPR015246 Formate dehydrogenase, transmembrane CF65_02677 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02677 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02677 IPR038384 CF65_02677 CF65_02678 IPR006471 Formate dehydrogenase, gamma subunit CF65_02678 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CF65_02678 IPR016174 Di-haem cytochrome, transmembrane CF65_02679 IPR016174 Di-haem cytochrome, transmembrane CF65_02682 IPR001792 Acylphosphatase-like domain CF65_02682 IPR004421 Carbamoyltransferase, HypF-type CF65_02682 IPR006070 YrdC-like domain CF65_02682 IPR011125 Zinc finger, HypF-type CF65_02682 IPR017945 DHBP synthase RibB-like alpha/beta domain CF65_02682 IPR017968 Acylphosphatase, conserved site CF65_02682 IPR036046 CF65_02682 CF65_02683 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02683 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02684 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CF65_02684 IPR003918 NADH:ubiquinone oxidoreductase CF65_02686 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CF65_02686 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CF65_02687 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal CF65_02687 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CF65_02688 IPR039428 CF65_02688 CF65_02689 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal CF65_02689 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CF65_02692 IPR001135 NADH-quinone oxidoreductase, subunit D CF65_02692 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CF65_02692 IPR001501 Nickel-dependent hydrogenase, large subunit CF65_02692 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CF65_02692 IPR029014 NiFe hydrogenase-like CF65_02692 IPR037232 CF65_02692 CF65_02692 IPR038290 CF65_02692 CF65_02693 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02693 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02695 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CF65_02696 IPR010005 Formate hydrogenlyase maturation HycH CF65_02697 IPR000671 Peptidase A31 family CF65_02697 IPR004420 Peptidase A31, hydrogenase maturation protease HycI CF65_02697 IPR023430 Peptidase HybD-like domain CF65_02698 IPR006656 Molybdopterin oxidoreductase CF65_02698 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CF65_02698 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CF65_02699 IPR006478 Formate dehydrogenase, alpha subunit CF65_02699 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CF65_02699 IPR006656 Molybdopterin oxidoreductase CF65_02699 IPR006657 Molydopterin dinucleotide-binding domain CF65_02699 IPR009010 Aspartate decarboxylase-like domain CF65_02700 IPR003781 CoA-binding CF65_02700 IPR005810 Succinyl-CoA ligase, alpha subunit CF65_02700 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CF65_02700 IPR016102 Succinyl-CoA synthetase-like CF65_02700 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CF65_02700 IPR033847 CF65_02700 CF65_02700 IPR036291 CF65_02700 CF65_02702 IPR005809 Succinyl-CoA synthetase, beta subunit CF65_02702 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CF65_02702 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CF65_02702 IPR013815 ATP-grasp fold, subdomain 1 CF65_02702 IPR016102 Succinyl-CoA synthetase-like CF65_02702 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CF65_02704 IPR000089 Biotin/lipoyl attachment CF65_02704 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CF65_02704 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CF65_02704 IPR004167 E3 binding CF65_02704 IPR006255 Dihydrolipoamide succinyltransferase CF65_02704 IPR011053 Single hybrid motif CF65_02704 IPR023213 Chloramphenicol acetyltransferase-like domain CF65_02704 IPR036625 CF65_02704 CF65_02706 IPR001017 Dehydrogenase, E1 component CF65_02706 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02706 IPR011603 2-oxoglutarate dehydrogenase E1 component CF65_02706 IPR029061 Thiamin diphosphate-binding fold CF65_02706 IPR031717 CF65_02706 CF65_02706 IPR032106 CF65_02706 CF65_02708 IPR001279 Beta-lactamase-like CF65_02708 IPR036866 CF65_02708 CF65_02710 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CF65_02710 IPR010275 Protein of unknown function DUF882 CF65_02711 IPR005490 L,D-transpeptidase catalytic domain CF65_02711 IPR038063 CF65_02711 CF65_02712 IPR001478 PDZ domain CF65_02712 IPR004447 C-terminal-processing peptidase S41A CF65_02712 IPR005151 Tail specific protease CF65_02712 IPR020992 Tail specific protease, C-terminal CF65_02712 IPR029045 ClpP/crotonase-like domain CF65_02712 IPR036034 CF65_02712 CF65_02713 IPR016103 ProQ/FinO domain CF65_02713 IPR023529 Transporter ProP effector, ProQ CF65_02713 IPR035236 CF65_02713 CF65_02713 IPR036442 CF65_02713 CF65_02714 IPR005219 Conserved hypothetical protein CHP00155 CF65_02714 IPR007498 Paraquat-inducible protein A CF65_02715 IPR003399 Mammalian cell entry-related CF65_02716 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CF65_02716 IPR002933 Peptidase M20 CF65_02716 IPR010161 Peptidase M20B, tripeptide aminopeptidase CF65_02716 IPR011650 Peptidase M20, dimerisation domain CF65_02716 IPR036264 CF65_02716 CF65_02718 IPR003439 ABC transporter-like CF65_02718 IPR003593 AAA+ ATPase domain CF65_02718 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CF65_02718 IPR008995 Molybdate/tungstate binding, C-terminal CF65_02718 IPR013611 Transport-associated OB, type 2 CF65_02718 IPR017871 ABC transporter, conserved site CF65_02718 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02719 IPR000515 MetI-like domain CF65_02719 IPR035906 CF65_02719 CF65_02720 IPR000515 MetI-like domain CF65_02720 IPR035906 CF65_02720 CF65_02721 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CF65_02721 IPR006059 Bacterial extracellular solute-binding, family 1 CF65_02722 IPR002125 CMP/dCMP deaminase, zinc-binding CF65_02722 IPR006263 Cytidine deaminase, homodimeric CF65_02722 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain CF65_02722 IPR016192 APOBEC/CMP deaminase, zinc-binding CF65_02722 IPR016193 Cytidine deaminase-like CF65_02722 IPR020797 Cytidine deaminase, bacteria CF65_02724 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CF65_02724 IPR002317 Serine-tRNA ligase, type1 CF65_02724 IPR010978 tRNA-binding arm CF65_02724 IPR015866 Serine-tRNA synthetase, type1, N-terminal CF65_02726 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CF65_02728 IPR003593 AAA+ ATPase domain CF65_02728 IPR003959 ATPase, AAA-type, core CF65_02728 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CF65_02728 IPR021886 MgsA AAA+ ATPase C-terminal CF65_02728 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02728 IPR032423 CF65_02728 CF65_02731 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CF65_02731 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CF65_02731 IPR029046 Lipoprotein localisation LolA/LolB/LppX CF65_02733 IPR002543 FtsK domain CF65_02733 IPR018541 FtsK gamma domain CF65_02733 IPR025199 Domain of unknown function DUF4117 CF65_02733 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02733 IPR036388 CF65_02733 CF65_02733 IPR036390 CF65_02733 CF65_02734 IPR000485 AsnC-type HTH domain CF65_02734 IPR011008 Dimeric alpha-beta barrel CF65_02734 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CF65_02734 IPR019887 Transcription regulator AsnC-type, C-terminal CF65_02734 IPR019888 Transcription regulator AsnC-type CF65_02734 IPR036388 CF65_02734 CF65_02734 IPR036390 CF65_02734 CF65_02735 IPR003593 AAA+ ATPase domain CF65_02735 IPR004504 DNA repair protein RadA CF65_02735 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02735 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02736 IPR023577 CYTH-like domain CF65_02736 IPR033469 CF65_02736 CF65_02737 IPR002727 Protein of unknown function DUF47 CF65_02737 IPR018445 Putitive phosphate transport regulator CF65_02737 IPR038078 CF65_02737 CF65_02738 IPR001204 Phosphate transporter CF65_02740 IPR003646 SH3-like domain, bacterial-type CF65_02740 IPR016476 SH3 domain protein CF65_02742 IPR002646 Poly A polymerase, head domain CF65_02742 IPR006674 HD domain CF65_02742 IPR006675 Uncharacterised domain HDIG CF65_02742 IPR012006 tRNA nucleotidyltransferase, proteobacteria CF65_02742 IPR032828 CF65_02742 CF65_02743 IPR004565 Outer membrane lipoprotein LolB CF65_02743 IPR029046 Lipoprotein localisation LolA/LolB/LppX CF65_02745 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CF65_02745 IPR006204 GHMP kinase N-terminal domain CF65_02745 IPR013750 GHMP kinase, C-terminal domain CF65_02745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02745 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02745 IPR036554 CF65_02745 CF65_02747 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CF65_02747 IPR005946 Ribose-phosphate diphosphokinase CF65_02747 IPR029057 Phosphoribosyltransferase-like CF65_02747 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CF65_02747 IPR037515 CF65_02747 CF65_02749 IPR000262 FMN-dependent dehydrogenase CF65_02749 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CF65_02749 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CF65_02749 IPR013785 Aldolase-type TIM barrel CF65_02749 IPR020920 L-lactate dehydrogenase, bacterial CF65_02751 IPR003804 L-lactate permease CF65_02754 IPR007458 Protein of unknown function DUF496 CF65_02756 IPR000192 Aminotransferase class V domain CF65_02756 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_02756 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_02756 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02756 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site CF65_02756 IPR022278 Phosphoserine aminotransferase CF65_02757 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CF65_02757 IPR004839 Aminotransferase, class I/classII CF65_02757 IPR005861 Histidinol-phosphate aminotransferase family CF65_02757 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_02757 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_02757 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02758 IPR001986 Enolpyruvate transferase domain CF65_02758 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CF65_02758 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CF65_02758 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CF65_02758 IPR036968 CF65_02758 CF65_02762 IPR002156 Ribonuclease H domain CF65_02762 IPR012337 Ribonuclease H-like domain CF65_02762 IPR022892 Ribonuclease H CF65_02762 IPR036397 CF65_02762 CF65_02763 IPR006054 DNA polymerase III, epsilon subunit CF65_02763 IPR006309 DNA polymerase 3, epsilon subunit CF65_02763 IPR012337 Ribonuclease H-like domain CF65_02763 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_02763 IPR036397 CF65_02763 CF65_02768 IPR011051 RmlC-like cupin domain CF65_02768 IPR014710 RmlC-like jelly roll fold CF65_02774 IPR001539 Peptidase U32 CF65_02774 IPR032525 CF65_02774 CF65_02775 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CF65_02775 IPR036100 CF65_02775 CF65_02776 IPR004839 Aminotransferase, class I/classII CF65_02776 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_02776 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_02776 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02777 IPR002616 tRNA-guanine(15) transglycosylase-like CF65_02777 IPR004803 Queuine tRNA-ribosyltransferase CF65_02777 IPR036511 CF65_02777 CF65_02779 IPR003849 Preprotein translocase YajC CF65_02780 IPR001036 Acriflavin resistance protein CF65_02780 IPR005791 Protein translocase subunit SecD CF65_02780 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CF65_02780 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CF65_02780 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CF65_02780 IPR027398 SecD export protein N-terminal TM domain CF65_02781 IPR005665 Protein-export membrane protein SecF, bacterial CF65_02781 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CF65_02781 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CF65_02781 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CF65_02782 IPR000531 TonB-dependent receptor, beta-barrel CF65_02782 IPR012910 TonB-dependent receptor, plug CF65_02782 IPR036942 CF65_02782 CF65_02782 IPR037066 CF65_02782 CF65_02784 IPR001670 Alcohol dehydrogenase, iron-type CF65_02784 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase CF65_02784 IPR015590 Aldehyde dehydrogenase domain CF65_02784 IPR016161 Aldehyde/histidinol dehydrogenase CF65_02784 IPR016162 Aldehyde dehydrogenase, N-terminal CF65_02784 IPR016163 Aldehyde dehydrogenase, C-terminal CF65_02784 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CF65_02785 IPR001851 ABC transporter, permease CF65_02786 IPR003439 ABC transporter-like CF65_02786 IPR003593 AAA+ ATPase domain CF65_02786 IPR017871 ABC transporter, conserved site CF65_02786 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02787 IPR025997 Periplasmic binding protein domain CF65_02787 IPR028082 Periplasmic binding protein-like I CF65_02788 IPR025997 Periplasmic binding protein domain CF65_02788 IPR028082 Periplasmic binding protein-like I CF65_02789 IPR000683 Oxidoreductase, N-terminal CF65_02789 IPR004104 Oxidoreductase, C-terminal CF65_02789 IPR036291 CF65_02789 CF65_02790 IPR010061 Methylmalonate-semialdehyde dehydrogenase CF65_02790 IPR015590 Aldehyde dehydrogenase domain CF65_02790 IPR016160 Aldehyde dehydrogenase, cysteine active site CF65_02790 IPR016161 Aldehyde/histidinol dehydrogenase CF65_02790 IPR016162 Aldehyde dehydrogenase, N-terminal CF65_02790 IPR016163 Aldehyde dehydrogenase, C-terminal CF65_02792 IPR000849 Sugar phosphate transporter CF65_02792 IPR011701 Major facilitator superfamily CF65_02792 IPR036259 CF65_02792 CF65_02793 IPR000760 Inositol monophosphatase CF65_02793 IPR020550 Inositol monophosphatase, conserved site CF65_02793 IPR020583 Inositol monophosphatase, metal-binding site CF65_02794 IPR011051 RmlC-like cupin domain CF65_02794 IPR014710 RmlC-like jelly roll fold CF65_02794 IPR021120 KduI/IolB isomerase CF65_02794 IPR024203 5-deoxy-glucuronate isomerase, IolB CF65_02796 IPR000281 Helix-turn-helix protein RpiR CF65_02796 IPR001347 Sugar isomerase (SIS) CF65_02796 IPR009057 Homeodomain-like CF65_02796 IPR036388 CF65_02796 CF65_02797 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CF65_02797 IPR011611 Carbohydrate kinase PfkB CF65_02797 IPR013785 Aldolase-type TIM barrel CF65_02797 IPR018659 Protein of unknown function DUF2090 CF65_02797 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain CF65_02797 IPR029056 Ribokinase-like CF65_02797 IPR030830 CF65_02797 CF65_02800 IPR000399 TPP-binding enzyme, conserved site CF65_02800 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CF65_02800 IPR012000 Thiamine pyrophosphate enzyme, central domain CF65_02800 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CF65_02800 IPR029035 DHS-like NAD/FAD-binding domain CF65_02800 IPR029061 Thiamin diphosphate-binding fold CF65_02800 IPR030817 CF65_02800 CF65_02801 IPR013022 Xylose isomerase-like, TIM barrel domain CF65_02801 IPR023952 Inosose dehydratase CF65_02801 IPR030823 CF65_02801 CF65_02801 IPR036237 CF65_02801 CF65_02802 IPR000683 Oxidoreductase, N-terminal CF65_02802 IPR004104 Oxidoreductase, C-terminal CF65_02802 IPR030827 CF65_02802 CF65_02802 IPR036291 CF65_02802 CF65_02803 IPR003997 RTX secretion protein D, Gram-negative bacteria CF65_02803 IPR006144 Secretion protein HlyD, conserved site CF65_02803 IPR010129 Type I secretion membrane fusion protein, HlyD CF65_02805 IPR003439 ABC transporter-like CF65_02805 IPR003593 AAA+ ATPase domain CF65_02805 IPR005074 Peptidase C39, bacteriocin processing CF65_02805 IPR010132 ATPase, type I secretion system, HlyB CF65_02805 IPR011527 ABC transporter type 1, transmembrane domain CF65_02805 IPR017871 ABC transporter, conserved site CF65_02805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02805 IPR036640 CF65_02805 CF65_02806 IPR001343 Haemolysin-type calcium-binding repeat CF65_02806 IPR003995 RTX toxin determinant A CF65_02806 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_02806 IPR013550 RTX C-terminal CF65_02806 IPR018504 RTX N-terminal CF65_02806 IPR018511 Hemolysin-type calcium-binding conserved site CF65_02807 IPR003996 RTX toxin-activating protein C, bacteria CF65_02808 IPR009369 Actinobacillus actinomycetemcomitans leukotoxin activator LktC CF65_02810 IPR001085 Serine hydroxymethyltransferase CF65_02810 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_02810 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_02810 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02810 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CF65_02810 IPR039429 CF65_02810 CF65_02818 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CF65_02818 IPR007848 Methyltransferase small domain CF65_02818 IPR013675 Methyltransferase small, N-terminal CF65_02818 IPR023543 rRNA small subunit methyltransferase C CF65_02818 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_02819 IPR004615 DNA polymerase III, psi subunit CF65_02819 IPR036654 CF65_02819 CF65_02821 IPR000182 GNAT domain CF65_02821 IPR006464 Ribosomal-protein-alanine acetyltransferase CF65_02821 IPR016181 Acyl-CoA N-acyltransferase CF65_02823 IPR006697 Exodeoxyribonuclease V, gamma subunit CF65_02823 IPR011335 Restriction endonuclease type II-like CF65_02823 IPR013986 DExx box DNA helicase domain CF65_02823 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02824 IPR020511 Uncharacterised protein family HI0941 CF65_02826 IPR016419 Prepilin peptidase-dependent protein B, predicted CF65_02827 IPR012902 Prokaryotic N-terminal methylation site CF65_02829 IPR006664 Outer membrane protein, bacterial CF65_02829 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CF65_02829 IPR006690 Outer membrane protein, OmpA-like, conserved site CF65_02829 IPR014169 Peptidoglycan-associated lipoprotein CF65_02829 IPR036737 CF65_02829 CF65_02829 IPR039001 CF65_02829 CF65_02830 IPR007195 TolB, N-terminal CF65_02830 IPR011042 Six-bladed beta-propeller, TolB-like CF65_02830 IPR011659 WD40-like Beta Propeller CF65_02830 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB CF65_02830 IPR036752 CF65_02830 CF65_02832 IPR014161 Tol-Pal system, TolA CF65_02834 IPR003400 Biopolymer transport protein ExbD/TolR CF65_02834 IPR014168 Biopolymer transport, TolR CF65_02836 IPR002898 MotA/TolQ/ExbB proton channel CF65_02836 IPR014163 Tol-Pal system, TolQ CF65_02837 IPR006683 Thioesterase superfamily CF65_02837 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CF65_02837 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CF65_02837 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase CF65_02837 IPR029069 HotDog domain CF65_02838 IPR011846 Cyd operon protein YbgE CF65_02839 IPR012994 Membrane bound YbgT-like CF65_02840 IPR003317 Cytochrome d ubiquinol oxidase, subunit II CF65_02841 IPR002585 Cytochrome d ubiquinol oxidase, subunit I CF65_02842 IPR020493 Uncharacterised protein family HI0310 CF65_02844 IPR003593 AAA+ ATPase domain CF65_02844 IPR004605 DNA helicase, Holliday junction RuvB type CF65_02844 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal CF65_02844 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal CF65_02844 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02844 IPR036388 CF65_02844 CF65_02844 IPR036390 CF65_02844 CF65_02845 IPR000085 Bacterial DNA recombination protein RuvA CF65_02845 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CF65_02845 IPR010994 RuvA domain 2-like CF65_02845 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal CF65_02845 IPR012340 Nucleic acid-binding, OB-fold CF65_02845 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CF65_02845 IPR036267 CF65_02845 CF65_02846 IPR002176 Crossover junction endodeoxyribonuclease RuvC CF65_02846 IPR012337 Ribonuclease H-like domain CF65_02846 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CF65_02846 IPR036397 CF65_02846 CF65_02848 IPR002876 Transcriptional regulator TACO1-like CF65_02848 IPR017856 Integrase, N-terminal zinc-binding domain-like CF65_02848 IPR026564 Transcriptional regulator TACO1-like, domain 3 CF65_02848 IPR029072 YebC-like CF65_02850 IPR000086 NUDIX hydrolase domain CF65_02850 IPR003564 dATP pyrophosphohydrolase CF65_02850 IPR015797 NUDIX hydrolase domain-like CF65_02850 IPR020084 NUDIX hydrolase, conserved site CF65_02856 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CF65_02856 IPR004115 GAD-like domain CF65_02856 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CF65_02856 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CF65_02856 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type CF65_02856 IPR012340 Nucleic acid-binding, OB-fold CF65_02856 IPR029351 GAD domain CF65_02857 IPR007269 Isoprenylcysteine carboxyl methyltransferase CF65_02858 IPR005271 tRNA (cmo5U34)-methyltransferase CF65_02858 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_02860 IPR025513 Domain of unknown function DUF4401 CF65_02860 IPR025833 GDYXXLXY protein CF65_02861 IPR018677 Protein of unknown function DUF2157, membrane CF65_02864 IPR000849 Sugar phosphate transporter CF65_02864 IPR011701 Major facilitator superfamily CF65_02864 IPR036259 CF65_02864 CF65_02865 IPR000531 TonB-dependent receptor, beta-barrel CF65_02865 IPR010917 TonB-dependent receptor, conserved site CF65_02865 IPR012910 TonB-dependent receptor, plug CF65_02865 IPR036942 CF65_02865 CF65_02865 IPR037066 CF65_02865 CF65_02866 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CF65_02866 IPR004361 Glyoxalase I CF65_02866 IPR018146 Glyoxalase I, conserved site CF65_02866 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CF65_02867 IPR005987 Ribonuclease T CF65_02867 IPR012337 Ribonuclease H-like domain CF65_02867 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_02867 IPR036397 CF65_02867 CF65_02870 IPR018461 Na+/H+ antiporter, NhaC-like CF65_02870 IPR032813 CF65_02870 CF65_02872 IPR010890 Primosomal replication PriB/PriC CF65_02872 IPR038338 CF65_02872 CF65_02873 IPR002792 TRAM domain CF65_02873 IPR005839 Methylthiotransferase CF65_02873 IPR006463 tRNA-i(6)A37 modification enzyme MiaB CF65_02873 IPR006638 Elongator protein 3/MiaB/NifB CF65_02873 IPR007197 Radical SAM CF65_02873 IPR013848 Methylthiotransferase, N-terminal CF65_02873 IPR020612 Methylthiotransferase, conserved site CF65_02873 IPR023404 Radical SAM, alpha/beta horseshoe CF65_02873 IPR038135 CF65_02873 CF65_02876 IPR025731 YecR-like lipoprotein CF65_02878 IPR003828 Protein of unknown function DUF208 CF65_02879 IPR000092 Polyprenyl synthetase CF65_02879 IPR008949 Terpenoid synthase CF65_02879 IPR033749 CF65_02879 CF65_02880 IPR001787 Ribosomal protein L21 CF65_02880 IPR018258 Ribosomal protein L21, conserved site CF65_02880 IPR028909 Ribosomal protein L21-like CF65_02880 IPR036164 CF65_02880 CF65_02881 IPR001684 Ribosomal protein L27 CF65_02881 IPR018261 Ribosomal protein L27, conserved site CF65_02883 IPR000620 Drug/metabolite transporter CF65_02885 IPR000620 Drug/metabolite transporter CF65_02886 IPR006073 GTP binding domain CF65_02886 IPR006074 GTP1/OBG, conserved site CF65_02886 IPR006169 GTP1/OBG domain CF65_02886 IPR014100 GTP-binding protein Obg/CgtA CF65_02886 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02886 IPR035101 CF65_02886 CF65_02886 IPR036726 CF65_02886 CF65_02888 IPR000037 SsrA-binding protein CF65_02888 IPR023620 Small protein B CF65_02891 IPR000914 Bacterial extracellular solute-binding protein, family 5 CF65_02891 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CF65_02892 IPR000914 Bacterial extracellular solute-binding protein, family 5 CF65_02895 IPR000515 MetI-like domain CF65_02895 IPR035906 CF65_02895 CF65_02897 IPR000515 MetI-like domain CF65_02897 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CF65_02897 IPR035906 CF65_02897 CF65_02898 IPR003439 ABC transporter-like CF65_02898 IPR003593 AAA+ ATPase domain CF65_02898 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CF65_02898 IPR017871 ABC transporter, conserved site CF65_02898 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02899 IPR003439 ABC transporter-like CF65_02899 IPR003593 AAA+ ATPase domain CF65_02899 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CF65_02899 IPR017871 ABC transporter, conserved site CF65_02899 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02902 IPR001789 Signal transduction response regulator, receiver domain CF65_02902 IPR001867 Signal transduction response regulator, C-terminal CF65_02902 IPR011006 CheY-like superfamily CF65_02902 IPR016032 Signal transduction response regulator, C-terminal effector CF65_02902 IPR036388 CF65_02902 CF65_02903 IPR000473 Ribosomal protein L36 CF65_02903 IPR035977 CF65_02903 CF65_02904 IPR002150 Ribosomal protein L31 CF65_02904 IPR027493 Ribosomal protein L31 type B CF65_02904 IPR034704 CF65_02904 CF65_02905 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CF65_02905 IPR031100 CF65_02905 CF65_02907 IPR003834 Cytochrome c assembly protein, transmembrane domain CF65_02907 IPR017937 Thioredoxin, conserved site CF65_02907 IPR022910 Thiol:disulphide interchange protein DsbD CF65_02907 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CF65_02907 IPR036249 CF65_02907 CF65_02907 IPR036929 CF65_02907 CF65_02909 IPR032808 CF65_02909 CF65_02910 IPR003029 Ribosomal protein S1, RNA-binding domain CF65_02910 IPR004659 Ribonuclease E/G CF65_02910 IPR012340 Nucleic acid-binding, OB-fold CF65_02910 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CF65_02910 IPR021968 Polyribonucleotide phosphorylase C-terminal CF65_02910 IPR022967 RNA-binding domain, S1 CF65_02910 IPR028878 Ribonuclease E CF65_02913 IPR002942 RNA-binding S4 domain CF65_02913 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CF65_02913 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CF65_02913 IPR006225 Pseudouridine synthase, RluC/RluD CF65_02913 IPR020103 Pseudouridine synthase, catalytic domain CF65_02913 IPR036986 CF65_02913 CF65_02915 IPR005746 Thioredoxin CF65_02915 IPR013766 Thioredoxin domain CF65_02915 IPR017937 Thioredoxin, conserved site CF65_02915 IPR036249 CF65_02915 CF65_02916 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF65_02916 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CF65_02916 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CF65_02916 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CF65_02916 IPR036291 CF65_02916 CF65_02917 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CF65_02917 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_02917 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_02917 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02919 IPR008258 Lytic transglycosylase-like SLT domain CF65_02919 IPR023346 Lysozyme-like domain CF65_02919 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02921 IPR036597 CF65_02921 CF65_02922 IPR000965 Gamma-glutamyl phosphate reductase GPR CF65_02922 IPR012134 Glutamate-5-semialdehyde dehydrogenase CF65_02922 IPR015590 Aldehyde dehydrogenase domain CF65_02922 IPR016161 Aldehyde/histidinol dehydrogenase CF65_02922 IPR016162 Aldehyde dehydrogenase, N-terminal CF65_02922 IPR016163 Aldehyde dehydrogenase, C-terminal CF65_02925 IPR005115 Uncharacterised domain UPF0126 CF65_02930 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase CF65_02930 IPR020548 Fructose-1,6-bisphosphatase, active site CF65_02930 IPR028343 Fructose-1,6-bisphosphatase CF65_02930 IPR033391 CF65_02930 CF65_02931 IPR000713 Mur ligase, N-terminal CF65_02931 IPR004101 Mur ligase, C-terminal CF65_02931 IPR005757 Murein peptide ligase CF65_02931 IPR013221 Mur ligase, central CF65_02931 IPR036565 CF65_02931 CF65_02931 IPR036615 CF65_02931 CF65_02932 IPR005300 Lytic transglycosylase MltA CF65_02932 IPR010611 3D domain CF65_02932 IPR026044 Membrane-bound lytic murein transglycosylase A CF65_02932 IPR036908 CF65_02932 CF65_02933 IPR000594 UBA/THIF-type NAD/FAD binding fold CF65_02933 IPR035985 CF65_02933 CF65_02935 IPR006127 Periplasmic solute binding protein family CF65_02936 IPR005519 Acid phosphatase (Class B) CF65_02936 IPR006423 5-nucleotidase lipoprotein e(P4) CF65_02936 IPR023214 HAD-like domain CF65_02936 IPR036412 CF65_02936 CF65_02937 IPR007551 Protein of unknown function DUF520 CF65_02937 IPR035570 CF65_02937 CF65_02937 IPR035571 CF65_02937 CF65_02937 IPR036183 CF65_02937 CF65_02939 IPR023190 Phosphoserine phosphatase, domain 2 CF65_02939 IPR023214 HAD-like domain CF65_02939 IPR036412 CF65_02939 CF65_02940 IPR019305 Uncharacterised protein family Smp CF65_02944 IPR002583 Ribosomal protein S20 CF65_02944 IPR036510 CF65_02944 CF65_02946 IPR004268 Flagellin assembly, membrane protein MviN CF65_02947 IPR002606 Riboflavin kinase, bacterial CF65_02947 IPR004821 Cytidyltransferase-like domain CF65_02947 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02947 IPR015864 FAD synthetase CF65_02947 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CF65_02947 IPR023465 Riboflavin kinase domain CF65_02950 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CF65_02950 IPR002300 Aminoacyl-tRNA synthetase, class Ia CF65_02950 IPR002301 Isoleucine-tRNA ligase CF65_02950 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CF65_02950 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CF65_02950 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase CF65_02950 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CF65_02950 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02950 IPR023585 Isoleucine-tRNA ligase, type 1 CF65_02952 IPR001872 Peptidase A8, signal peptidase II CF65_02954 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CF65_02955 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CF65_02955 IPR005215 Trigger factor CF65_02955 IPR008880 Trigger factor, C-terminal domain CF65_02955 IPR008881 Trigger factor, ribosome-binding, bacterial CF65_02955 IPR027304 Trigger factor/SurA domain CF65_02955 IPR036611 CF65_02955 CF65_02955 IPR037041 CF65_02955 CF65_02956 IPR002104 Integrase, catalytic CF65_02956 IPR004107 Integrase, SAM-like, N-terminal CF65_02956 IPR010998 Integrase, Lambda-type, N-terminal CF65_02956 IPR011010 DNA breaking-rejoining enzyme, catalytic core CF65_02956 IPR011932 Tyrosine recombinase XerD CF65_02956 IPR013762 Integrase-like, catalytic core CF65_02956 IPR023009 Tyrosine recombinase XerC/XerD CF65_02958 IPR024989 Major facilitator superfamily associated domain CF65_02958 IPR026032 Phenylproprionate/maltose permease CF65_02958 IPR036259 CF65_02958 CF65_02959 IPR000304 Pyrroline-5-carboxylate reductase CF65_02959 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CF65_02959 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CF65_02961 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CF65_02961 IPR036291 CF65_02961 CF65_02962 IPR007476 Putative exonuclease, RdgC CF65_02963 IPR012097 Opacity-associated protein B CF65_02963 IPR018660 C-type lysozyme, inhibitor CF65_02963 IPR036328 CF65_02963 CF65_02964 IPR007340 Opacity-associated protein A CF65_02964 IPR013731 Opacity-associated protein A, N-terminal CF65_02966 IPR003739 Lysine-2,3-aminomutase family CF65_02966 IPR007197 Radical SAM CF65_02966 IPR013785 Aldolase-type TIM barrel CF65_02966 IPR022462 Lysine-2,3-aminomutase-like CF65_02967 IPR001059 Translation elongation factor P/YeiP, central CF65_02967 IPR008991 Translation protein SH3-like domain CF65_02967 IPR011768 Translation elongation factor P CF65_02967 IPR012340 Nucleic acid-binding, OB-fold CF65_02967 IPR013185 Translation elongation factor, KOW-like CF65_02967 IPR013852 Translation elongation factor P/YeiP, conserved site CF65_02967 IPR014722 Ribosomal protein L2 domain 2 CF65_02967 IPR015365 Elongation factor P, C-terminal CF65_02967 IPR020599 Translation elongation factor P/YeiP CF65_02969 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_02969 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02970 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CF65_02970 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CF65_02970 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02972 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CF65_02972 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02973 IPR013059 Tryptophan/tyrosine transporter CF65_02973 IPR013061 Tryptophan/tryrosine permease, conserved site CF65_02973 IPR018227 Tryptophan/tyrosine permease CF65_02974 IPR013559 YheO-like CF65_02974 IPR039445 CF65_02974 CF65_02975 IPR019275 Protein of unknown function DUF2301 CF65_02976 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CF65_02976 IPR010138 UDP-2,3-diacylglucosamine hydrolase CF65_02976 IPR029052 Metallo-dependent phosphatase-like CF65_02977 IPR002123 Phospholipid/glycerol acyltransferase CF65_02977 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CF65_02978 IPR008972 Cupredoxin CF65_02978 IPR011707 Multicopper oxidase, type 3 CF65_02978 IPR026589 Cell division protein FtsP CF65_02980 IPR000620 Drug/metabolite transporter CF65_02982 IPR001989 Radical-activating enzyme, conserved site CF65_02982 IPR007197 Radical SAM CF65_02982 IPR012838 Pyruvate formate-lyase activating enzyme CF65_02982 IPR012839 Glycyl radical enzyme activase CF65_02982 IPR013785 Aldolase-type TIM barrel CF65_02983 IPR001150 Glycine radical domain CF65_02983 IPR004184 Pyruvate formate lyase domain CF65_02983 IPR005949 Formate acetyltransferase CF65_02983 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CF65_02984 IPR000292 Formate/nitrite transporter CF65_02984 IPR023271 Aquaporin-like CF65_02984 IPR023999 Formate transporter FocA, putative CF65_02984 IPR024002 Formate/nitrite transporter, conserved site CF65_02987 IPR001310 Histidine triad (HIT) protein CF65_02987 IPR019808 Histidine triad, conserved site CF65_02987 IPR036265 CF65_02987 CF65_02989 IPR010824 Protein of unknown function DUF1425 CF65_02989 IPR038483 CF65_02989 CF65_02990 IPR001764 Glycoside hydrolase, family 3, N-terminal CF65_02990 IPR017853 Glycoside hydrolase, superfamily CF65_02990 IPR022956 Beta-hexosaminidase, bacterial CF65_02990 IPR036962 CF65_02990 CF65_02992 IPR010280 (Uracil-5)-methyltransferase family CF65_02992 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC CF65_02992 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CF65_02992 IPR030390 CF65_02992 CF65_02992 IPR030391 CF65_02992 CF65_02993 IPR000023 Phosphofructokinase domain CF65_02993 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type CF65_02993 IPR012828 6-phosphofructokinase CF65_02993 IPR015912 Phosphofructokinase, conserved site CF65_02993 IPR022953 Phosphofructokinase CF65_02993 IPR035966 CF65_02993 CF65_02994 IPR027469 Cation efflux protein transmembrane domain CF65_02994 IPR027470 Cation efflux protein cytoplasmic domain CF65_02994 IPR036837 CF65_02994 CF65_02996 IPR002524 Cation efflux protein CF65_02996 IPR027469 Cation efflux protein transmembrane domain CF65_02999 IPR005583 Uncharacterised protein family UPF0246 CF65_03000 IPR002043 Uracil-DNA glycosylase CF65_03000 IPR005122 Uracil-DNA glycosylase-like CF65_03000 IPR018085 Uracil-DNA glycosylase, active site CF65_03000 IPR036895 CF65_03000 CF65_03001 IPR001150 Glycine radical domain CF65_03001 IPR011140 Autonomous glycyl radical cofactor GrcA CF65_03001 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CF65_03003 IPR000640 Translation elongation factor EFG, V domain CF65_03003 IPR000795 Elongation factor, GTP-binding domain CF65_03003 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CF65_03003 IPR005225 Small GTP-binding protein domain CF65_03003 IPR006297 Elongation factor 4 CF65_03003 IPR013842 GTP-binding protein LepA, C-terminal CF65_03003 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_03003 IPR031157 CF65_03003 CF65_03003 IPR035647 CF65_03003 CF65_03003 IPR038363 CF65_03003 CF65_03004 IPR000223 Peptidase S26A, signal peptidase I CF65_03004 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_03004 IPR019533 Peptidase S26 CF65_03004 IPR019756 Peptidase S26A, signal peptidase I, serine active site CF65_03004 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CF65_03004 IPR019758 Peptidase S26A, signal peptidase I, conserved site CF65_03004 IPR036286 CF65_03004 CF65_03006 IPR000999 Ribonuclease III domain CF65_03006 IPR011907 Ribonuclease III CF65_03006 IPR014720 Double-stranded RNA-binding domain CF65_03006 IPR036389 CF65_03006 CF65_03008 IPR004044 K Homology domain, type 2 CF65_03008 IPR005225 Small GTP-binding protein domain CF65_03008 IPR005662 GTP-binding protein Era CF65_03008 IPR006073 GTP binding domain CF65_03008 IPR009019 K homology domain, prokaryotic type CF65_03008 IPR015946 K homology domain-like, alpha/beta CF65_03008 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_03010 IPR004520 tRNA modification GTPase MnmE CF65_03010 IPR005225 Small GTP-binding protein domain CF65_03010 IPR006073 GTP binding domain CF65_03010 IPR018948 GTP-binding protein TrmE, N-terminal CF65_03010 IPR025867 tRNA modification GTPase MnmE C-terminal domain CF65_03010 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CF65_03010 IPR027368 tRNA modification GTPase MnmE domain 2 CF65_03010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_03011 IPR001708 Membrane insertase OXA1/ALB3/YidC CF65_03011 IPR019998 Membrane insertase YidC CF65_03011 IPR028053 Membrane insertase YidC, N-terminal CF65_03011 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CF65_03011 IPR038210 CF65_03011 CF65_03011 IPR038221 CF65_03011 CF65_03013 IPR000100 Ribonuclease P CF65_03013 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_03013 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_03014 IPR000271 Ribosomal protein L34 CF65_03014 IPR020939 Ribosomal protein L34, conserved site