CF65_03004 951c5bf57a9b7c1dfad85a0ab908126c 340 ProSitePatterns PS00760 Signal peptidases I lysine active site. 170 182 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CF65_03004 951c5bf57a9b7c1dfad85a0ab908126c 340 ProSitePatterns PS00501 Signal peptidases I serine active site. 113 120 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CF65_03004 951c5bf57a9b7c1dfad85a0ab908126c 340 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 89 319 3.7E-47 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CF65_03004 951c5bf57a9b7c1dfad85a0ab908126c 340 Gene3D G3DSA:2.10.109.10 102 318 5.0E-68 T 14-10-2018 CF65_03004 951c5bf57a9b7c1dfad85a0ab908126c 340 Gene3D G3DSA:2.170.230.10 179 278 5.0E-68 T 14-10-2018 CF65_03004 951c5bf57a9b7c1dfad85a0ab908126c 340 Pfam PF00717 Peptidase S24-like 110 183 3.2E-20 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_03004 951c5bf57a9b7c1dfad85a0ab908126c 340 ProSitePatterns PS00761 Signal peptidases I signature 3. 284 297 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CF65_03004 951c5bf57a9b7c1dfad85a0ab908126c 340 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 168 180 1.7E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CF65_03004 951c5bf57a9b7c1dfad85a0ab908126c 340 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 104 120 1.7E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CF65_03004 951c5bf57a9b7c1dfad85a0ab908126c 340 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 279 298 1.7E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CF65_03004 951c5bf57a9b7c1dfad85a0ab908126c 340 Pfam PF10502 Signal peptidase, peptidase S26 276 316 3.5E-6 T 14-10-2018 IPR019533 Peptidase S26 CF65_03004 951c5bf57a9b7c1dfad85a0ab908126c 340 SUPERFAMILY SSF51306 102 338 1.74E-70 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CF65_00708 fae60cabeb224d6c31090736c1e51984 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 3.3E-235 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CF65_00708 fae60cabeb224d6c31090736c1e51984 404 PIRSF PIRSF005572 2 384 5.8E-135 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CF65_00708 fae60cabeb224d6c31090736c1e51984 404 Pfam PF00266 Aminotransferase class-V 5 368 7.4E-86 T 14-10-2018 IPR000192 Aminotransferase class V domain CF65_00708 fae60cabeb224d6c31090736c1e51984 404 Gene3D G3DSA:3.40.640.10 16 262 8.0E-165 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_00708 fae60cabeb224d6c31090736c1e51984 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CF65_00708 fae60cabeb224d6c31090736c1e51984 404 Gene3D G3DSA:3.90.1150.10 5 376 8.0E-165 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_00708 fae60cabeb224d6c31090736c1e51984 404 SUPERFAMILY SSF53383 5 390 2.02E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00708 fae60cabeb224d6c31090736c1e51984 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.569 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CF65_00084 9fb5d01a2759f84700ff7f9a8e4fb88c 404 Pfam PF00155 Aminotransferase class I and II 60 381 1.0E-48 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CF65_00084 9fb5d01a2759f84700ff7f9a8e4fb88c 404 Gene3D G3DSA:3.90.1150.10 22 398 6.4E-145 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_00084 9fb5d01a2759f84700ff7f9a8e4fb88c 404 Gene3D G3DSA:3.40.640.10 53 294 6.4E-145 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_00084 9fb5d01a2759f84700ff7f9a8e4fb88c 404 SUPERFAMILY SSF53383 6 401 1.46E-94 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00546 17672d81ed7f7807ed4976a94dd163b6 211 SUPERFAMILY SSF48695 15 192 4.32E-51 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily CF65_00546 17672d81ed7f7807ed4976a94dd163b6 211 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 9 190 1.8E-95 T 14-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 CF65_00546 17672d81ed7f7807ed4976a94dd163b6 211 PIRSF PIRSF000013 1 199 6.6E-95 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 CF65_00546 17672d81ed7f7807ed4976a94dd163b6 211 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 20 189 8.0E-70 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CF65_00546 17672d81ed7f7807ed4976a94dd163b6 211 Gene3D G3DSA:1.10.3820.10 17 193 3.2E-37 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily CF65_02898 9b1779107d99afbf1666d841b3090b1c 327 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02898 9b1779107d99afbf1666d841b3090b1c 327 Gene3D G3DSA:3.40.50.300 5 326 1.3E-96 T 14-10-2018 CF65_02898 9b1779107d99afbf1666d841b3090b1c 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 320 6.1E-27 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CF65_02898 9b1779107d99afbf1666d841b3090b1c 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 9.7E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CF65_02898 9b1779107d99afbf1666d841b3090b1c 327 SUPERFAMILY SSF52540 37 310 1.41E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02898 9b1779107d99afbf1666d841b3090b1c 327 Pfam PF00005 ABC transporter 28 184 7.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02898 9b1779107d99afbf1666d841b3090b1c 327 SMART SM00382 36 242 1.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_03013 a4e5b54c0c4c5d3c4888f85d19da7cb8 111 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 6 87 9.0E-35 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CF65_03013 a4e5b54c0c4c5d3c4888f85d19da7cb8 111 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 104 1.8E-31 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CF65_03013 a4e5b54c0c4c5d3c4888f85d19da7cb8 111 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 12.59 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CF65_03013 a4e5b54c0c4c5d3c4888f85d19da7cb8 111 Pfam PF00825 Ribonuclease P 1 100 3.2E-29 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CF65_03013 a4e5b54c0c4c5d3c4888f85d19da7cb8 111 SUPERFAMILY SSF54211 1 107 4.55E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_03013 a4e5b54c0c4c5d3c4888f85d19da7cb8 111 Gene3D G3DSA:3.30.230.10 1 108 7.2E-38 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_01690 5721caab2338f74008610c96d582a348 785 Gene3D G3DSA:1.10.3810.10 40 235 3.1E-46 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_01690 5721caab2338f74008610c96d582a348 785 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 30 781 2.2E-259 T 14-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_01690 5721caab2338f74008610c96d582a348 785 Pfam PF00912 Transglycosylase 54 213 4.1E-46 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_01690 5721caab2338f74008610c96d582a348 785 SUPERFAMILY SSF53955 35 236 7.31E-53 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily CF65_01690 5721caab2338f74008610c96d582a348 785 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 696 778 2.9E-14 T 14-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_01690 5721caab2338f74008610c96d582a348 785 Gene3D G3DSA:3.40.710.10 249 621 4.2E-75 T 14-10-2018 CF65_01690 5721caab2338f74008610c96d582a348 785 SUPERFAMILY SSF56601 216 642 1.13E-89 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CF65_01690 5721caab2338f74008610c96d582a348 785 Pfam PF00905 Penicillin binding protein transpeptidase domain 310 557 2.2E-15 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CF65_00266 46e70c4c8eea6f18ca6450d256d8da13 411 Gene3D G3DSA:1.20.1250.20 9 411 1.2E-72 T 14-10-2018 CF65_00266 46e70c4c8eea6f18ca6450d256d8da13 411 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CF65_00266 46e70c4c8eea6f18ca6450d256d8da13 411 Pfam PF07690 Major Facilitator Superfamily 21 308 1.5E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CF65_00266 46e70c4c8eea6f18ca6450d256d8da13 411 SUPERFAMILY SSF103473 6 410 5.62E-79 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_00590 1ffa40acf37402801bbf62ad163c2600 900 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 883 900 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site CF65_00590 1ffa40acf37402801bbf62ad163c2600 900 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 138 5.7E-7 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain CF65_00590 1ffa40acf37402801bbf62ad163c2600 900 Gene3D G3DSA:2.170.130.10 28 153 1.1E-31 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_00590 1ffa40acf37402801bbf62ad163c2600 900 SUPERFAMILY SSF56935 46 900 9.16E-50 T 14-10-2018 CF65_00590 1ffa40acf37402801bbf62ad163c2600 900 Pfam PF00593 TonB dependent receptor 331 899 1.1E-25 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_02246 cc53296c0e38a6ec41550c1e696e0df9 234 Gene3D G3DSA:3.40.50.880 2 232 3.9E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like CF65_02246 cc53296c0e38a6ec41550c1e696e0df9 234 Pfam PF03575 Peptidase family S51 4 208 5.0E-70 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 CF65_02246 cc53296c0e38a6ec41550c1e696e0df9 234 SUPERFAMILY SSF52317 3 222 1.15E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like CF65_02343 9693d363cec4eaf3c648381904d0cec6 469 Gene3D G3DSA:3.10.20.70 4 106 5.8E-36 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CF65_02343 9693d363cec4eaf3c648381904d0cec6 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CF65_02343 9693d363cec4eaf3c648381904d0cec6 469 SMART SM01230 104 381 1.9E-143 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CF65_02343 9693d363cec4eaf3c648381904d0cec6 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CF65_02343 9693d363cec4eaf3c648381904d0cec6 469 SUPERFAMILY SSF55931 104 469 5.1E-133 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CF65_02343 9693d363cec4eaf3c648381904d0cec6 469 Pfam PF00120 Glutamine synthetase, catalytic domain 105 468 4.0E-136 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CF65_02343 9693d363cec4eaf3c648381904d0cec6 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CF65_02343 9693d363cec4eaf3c648381904d0cec6 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 1.2E-25 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CF65_02343 9693d363cec4eaf3c648381904d0cec6 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 469 2.3E-211 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CF65_02343 9693d363cec4eaf3c648381904d0cec6 469 Gene3D G3DSA:3.30.590.10 107 459 1.4E-145 T 14-10-2018 CF65_02343 9693d363cec4eaf3c648381904d0cec6 469 SUPERFAMILY SSF54368 5 103 2.75E-32 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CF65_01229 e5c0c88cef1a6dcae876c0974ba8fc94 103 SMART SM00739 4 31 0.0021 T 14-10-2018 IPR005824 KOW CF65_01229 e5c0c88cef1a6dcae876c0974ba8fc94 103 SUPERFAMILY SSF50104 4 102 4.96E-32 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily CF65_01229 e5c0c88cef1a6dcae876c0974ba8fc94 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01229 e5c0c88cef1a6dcae876c0974ba8fc94 103 Gene3D G3DSA:2.30.30.30 2 103 3.1E-37 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 CF65_01229 e5c0c88cef1a6dcae876c0974ba8fc94 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.355 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01229 e5c0c88cef1a6dcae876c0974ba8fc94 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 8.8E-23 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01229 e5c0c88cef1a6dcae876c0974ba8fc94 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 5.9E-39 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 Hamap MF_01382 Protein translocase subunit SecA [secA]. 26 853 19.311 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 ProSitePatterns PS01312 SecA family signature. 521 536 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 Gene3D G3DSA:3.90.1440.10 250 389 8.1E-173 T 14-10-2018 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 Gene3D G3DSA:3.40.50.300 43 436 8.1E-173 T 14-10-2018 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 SUPERFAMILY SSF52540 437 633 1.17E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 SMART SM00958 249 379 1.3E-81 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 Pfam PF01043 SecA preprotein cross-linking domain 253 379 9.0E-39 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 49 838 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 PRINTS PR00906 SecA protein signature 122 136 3.9E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 PRINTS PR00906 SecA protein signature 84 108 3.9E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 PRINTS PR00906 SecA protein signature 191 211 3.9E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 PRINTS PR00906 SecA protein signature 360 382 3.9E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 PRINTS PR00906 SecA protein signature 397 414 3.9E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 PRINTS PR00906 SecA protein signature 138 148 3.9E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 PRINTS PR00906 SecA protein signature 434 447 3.9E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 Pfam PF07516 SecA Wing and Scaffold domain 639 851 8.7E-65 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 SUPERFAMILY SSF52540 27 436 1.08E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 SUPERFAMILY SSF81767 248 389 1.31E-43 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 Gene3D G3DSA:3.40.50.300 438 641 1.8E-83 T 14-10-2018 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 SUPERFAMILY SSF81886 641 906 3.92E-80 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 SMART SM00957 27 423 6.0E-300 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 Pfam PF02810 SEC-C motif 898 915 3.4E-10 T 14-10-2018 IPR004027 SEC-C motif CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 Pfam PF07517 SecA DEAD-like domain 28 423 6.6E-127 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CF65_01083 0ca54cf578a25d0dcfcd13a8830f5d40 920 Gene3D G3DSA:1.10.3060.10 643 854 2.0E-76 T 14-10-2018 CF65_02362 7b5f64733ccb44ab976091a9820dbdb7 247 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 118 188 1.7E-12 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CF65_02362 7b5f64733ccb44ab976091a9820dbdb7 247 Gene3D G3DSA:3.90.470.20 40 137 2.5E-14 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CF65_02362 7b5f64733ccb44ab976091a9820dbdb7 247 SUPERFAMILY SSF56214 42 104 3.14E-10 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CF65_02362 7b5f64733ccb44ab976091a9820dbdb7 247 SUPERFAMILY SSF56214 118 220 1.2E-17 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CF65_01488 b0eabfe9d01d982bb4a3243f163ff27d 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.822 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CF65_01488 b0eabfe9d01d982bb4a3243f163ff27d 156 Gene3D G3DSA:1.20.5.620 62 122 5.0E-17 T 14-10-2018 CF65_01488 b0eabfe9d01d982bb4a3243f163ff27d 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 4.6E-30 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CF65_01488 b0eabfe9d01d982bb4a3243f163ff27d 156 SUPERFAMILY SSF81573 62 121 1.96E-13 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CF65_01488 b0eabfe9d01d982bb4a3243f163ff27d 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.1E-56 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 31 436 2.3E-124 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 Pfam PF03958 Bacterial type II/III secretion system short domain 130 195 4.5E-13 T 14-10-2018 IPR005644 NolW-like CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 PRINTS PR01032 Gene IV protein signature 298 321 8.0E-8 T 14-10-2018 CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 PRINTS PR01032 Gene IV protein signature 417 439 8.0E-8 T 14-10-2018 CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 PRINTS PR01032 Gene IV protein signature 364 392 8.0E-8 T 14-10-2018 CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 PRINTS PR01032 Gene IV protein signature 257 280 8.0E-8 T 14-10-2018 CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 PRINTS PR00811 Bacterial general secretion pathway protein D signature 273 297 2.8E-17 T 14-10-2018 IPR001775 GspD/PilQ family CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 PRINTS PR00811 Bacterial general secretion pathway protein D signature 401 419 2.8E-17 T 14-10-2018 IPR001775 GspD/PilQ family CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 PRINTS PR00811 Bacterial general secretion pathway protein D signature 195 205 2.8E-17 T 14-10-2018 IPR001775 GspD/PilQ family CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 PRINTS PR00811 Bacterial general secretion pathway protein D signature 424 438 2.8E-17 T 14-10-2018 IPR001775 GspD/PilQ family CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 Pfam PF00263 Bacterial type II and III secretion system protein 277 437 8.9E-46 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 Gene3D G3DSA:3.30.1370.120 93 196 3.2E-35 T 14-10-2018 IPR038591 NolW-like superfamily CF65_01297 9192655158e1c4c8efbd9c10f7b5d054 469 Gene3D G3DSA:3.30.1370.130 34 92 1.1E-30 T 14-10-2018 CF65_00384 0c89144ee7702690041110a4b3b2ee06 327 Gene3D G3DSA:3.20.20.70 10 250 5.2E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_00384 0c89144ee7702690041110a4b3b2ee06 327 PIRSF PIRSF006621 1 320 8.5E-75 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CF65_00384 0c89144ee7702690041110a4b3b2ee06 327 Gene3D G3DSA:1.20.120.1460 256 327 4.8E-19 T 14-10-2018 CF65_00384 0c89144ee7702690041110a4b3b2ee06 327 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 12 326 3.5E-170 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CF65_00384 0c89144ee7702690041110a4b3b2ee06 327 Pfam PF01207 Dihydrouridine synthase (Dus) 15 321 1.8E-100 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CF65_00384 0c89144ee7702690041110a4b3b2ee06 327 SUPERFAMILY SSF51395 12 322 1.02E-71 T 14-10-2018 CF65_00384 0c89144ee7702690041110a4b3b2ee06 327 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 93 111 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CF65_00384 0c89144ee7702690041110a4b3b2ee06 327 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 327 50.426 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CF65_02604 46afee4012afecbdac518af47e005140 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.4E-41 T 14-10-2018 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 4.4E-41 T 14-10-2018 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.4E-41 T 14-10-2018 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.4E-41 T 14-10-2018 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 4.4E-41 T 14-10-2018 CF65_02604 46afee4012afecbdac518af47e005140 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 1.3E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CF65_02604 46afee4012afecbdac518af47e005140 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.7E-123 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CF65_02604 46afee4012afecbdac518af47e005140 317 Gene3D G3DSA:3.50.50.60 10 312 8.0E-132 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 2.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 2.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CF65_02604 46afee4012afecbdac518af47e005140 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CF65_02604 46afee4012afecbdac518af47e005140 317 Gene3D G3DSA:3.50.50.60 118 244 8.0E-132 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_02604 46afee4012afecbdac518af47e005140 317 SUPERFAMILY SSF51905 2 313 3.68E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01631 4602b158d2f62057d1cbef681fdcd599 270 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 126 3.8E-43 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_01631 4602b158d2f62057d1cbef681fdcd599 270 SUPERFAMILY SSF51735 3 269 4.15E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01631 4602b158d2f62057d1cbef681fdcd599 270 Gene3D G3DSA:3.40.50.720 4 265 2.1E-101 T 14-10-2018 CF65_01631 4602b158d2f62057d1cbef681fdcd599 270 PIRSF PIRSF000161 1 269 1.1E-88 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_01631 4602b158d2f62057d1cbef681fdcd599 270 Gene3D G3DSA:3.30.360.10 128 235 2.1E-101 T 14-10-2018 CF65_01631 4602b158d2f62057d1cbef681fdcd599 270 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_01631 4602b158d2f62057d1cbef681fdcd599 270 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 2 266 1.4E-111 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_01631 4602b158d2f62057d1cbef681fdcd599 270 SUPERFAMILY SSF55347 128 237 2.62E-35 T 14-10-2018 CF65_01631 4602b158d2f62057d1cbef681fdcd599 270 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 6.5E-43 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_01631 4602b158d2f62057d1cbef681fdcd599 270 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 3 266 33.982 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_01796 d055f63342acd2b405e0695083e1cf83 339 PIRSF PIRSF006468 2 339 5.9E-123 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 CF65_01796 d055f63342acd2b405e0695083e1cf83 339 ProSitePatterns PS00770 Aminotransferases class-IV signature. 219 248 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 CF65_01796 d055f63342acd2b405e0695083e1cf83 339 SUPERFAMILY SSF56752 5 335 7.19E-103 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CF65_01796 d055f63342acd2b405e0695083e1cf83 339 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 30 338 1.7E-146 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 CF65_01796 d055f63342acd2b405e0695083e1cf83 339 Gene3D G3DSA:3.30.470.10 1 159 4.4E-60 T 14-10-2018 CF65_01796 d055f63342acd2b405e0695083e1cf83 339 Pfam PF01063 Amino-transferase class IV 55 292 7.1E-38 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CF65_01796 d055f63342acd2b405e0695083e1cf83 339 Gene3D G3DSA:3.20.10.10 160 339 1.5E-57 T 14-10-2018 CF65_02983 08643bd85a1a0f9cb10f9e15036a74ce 770 Pfam PF02901 Pyruvate formate lyase-like 23 624 1.6E-208 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CF65_02983 08643bd85a1a0f9cb10f9e15036a74ce 770 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 770 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CF65_02983 08643bd85a1a0f9cb10f9e15036a74ce 770 ProSitePatterns PS00850 Glycine radical domain signature. 740 748 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CF65_02983 08643bd85a1a0f9cb10f9e15036a74ce 770 SUPERFAMILY SSF51998 5 769 5.49E-293 T 14-10-2018 CF65_02983 08643bd85a1a0f9cb10f9e15036a74ce 770 Pfam PF01228 Glycine radical 640 751 3.3E-42 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 CF65_02983 08643bd85a1a0f9cb10f9e15036a74ce 770 Gene3D G3DSA:3.20.70.20 2 770 0.0 T 14-10-2018 CF65_02983 08643bd85a1a0f9cb10f9e15036a74ce 770 PIRSF PIRSF000379 8 770 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CF65_01589 4ec3c046a75e71a940a0aec7e762db5d 164 Gene3D G3DSA:3.40.50.300 2 159 4.1E-49 T 14-10-2018 CF65_01589 4ec3c046a75e71a940a0aec7e762db5d 164 SUPERFAMILY SSF52540 7 152 2.75E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01589 4ec3c046a75e71a940a0aec7e762db5d 164 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 146 1.7E-48 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CF65_01589 4ec3c046a75e71a940a0aec7e762db5d 164 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 135 2.2E-39 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CF65_02158 21c2ed840adf81c3903913adcd480138 361 Pfam PF00593 TonB dependent receptor 53 360 8.4E-38 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_02158 21c2ed840adf81c3903913adcd480138 361 Gene3D G3DSA:2.40.170.20 10 361 9.2E-51 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_02158 21c2ed840adf81c3903913adcd480138 361 SUPERFAMILY SSF56935 51 361 8.06E-48 T 14-10-2018 CF65_01818 a3ed4f61269a055d22bc108dad2ff885 231 SUPERFAMILY SSF81345 1 227 8.24E-38 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_01818 a3ed4f61269a055d22bc108dad2ff885 231 Pfam PF00950 ABC 3 transport family 1 227 7.3E-78 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CF65_01818 a3ed4f61269a055d22bc108dad2ff885 231 Gene3D G3DSA:1.10.3470.10 4 231 4.6E-10 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 SMART SM01086 765 854 3.4E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 SUPERFAMILY SSF52540 546 851 6.29E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 SUPERFAMILY SSF52540 159 545 6.34E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 1.0E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 Gene3D G3DSA:1.10.8.60 765 856 1.8E-25 T 14-10-2018 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 Gene3D G3DSA:3.40.50.300 343 544 1.5E-68 T 14-10-2018 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 SMART SM00382 198 343 2.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 SMART SM00382 597 757 7.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 SUPERFAMILY SSF81923 4 156 4.61E-44 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 Gene3D G3DSA:3.40.50.300 550 763 2.3E-88 T 14-10-2018 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 758 4.5E-56 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 Gene3D G3DSA:3.40.50.300 149 342 5.6E-75 T 14-10-2018 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.0E-12 T 14-10-2018 IPR004176 Clp, N-terminal CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.7E-13 T 14-10-2018 IPR004176 Clp, N-terminal CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 844 4.0E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 2.4E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 2.4E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 2.4E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 2.4E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 CF65_01211 88a1f9e48bd0c78a8f918babb1023952 856 Gene3D G3DSA:1.10.1780.10 1 148 3.9E-33 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CF65_01006 dd9cf4782e79aac61cbd36ce993608f9 329 ProDom PD049525 CYTOSINE HI0843 HYDROLASE RELATED METAL-DEPENDENT DEAMINASE HYDROLASES PM1882 287 329 2.0E-18 T 14-10-2018 CF65_01006 dd9cf4782e79aac61cbd36ce993608f9 329 SUPERFAMILY SSF51556 22 328 5.45E-66 T 14-10-2018 IPR032466 Metal-dependent hydrolase CF65_01006 dd9cf4782e79aac61cbd36ce993608f9 329 Pfam PF01979 Amidohydrolase family 22 329 6.8E-10 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CF65_01006 dd9cf4782e79aac61cbd36ce993608f9 329 Gene3D G3DSA:3.20.20.140 23 329 1.2E-56 T 14-10-2018 CF65_02590 6dee9fdab81a20a03d7cc1519d642a76 150 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 149 3.8E-26 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain CF65_02590 6dee9fdab81a20a03d7cc1519d642a76 150 Gene3D G3DSA:2.40.50.140 81 150 4.9E-5 T 14-10-2018 CF65_00488 ade58484f320413413a7083e37f92638 239 Gene3D G3DSA:3.40.50.1580 1 238 6.8E-75 T 14-10-2018 CF65_00488 ade58484f320413413a7083e37f92638 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 233 7.7E-120 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CF65_00488 ade58484f320413413a7083e37f92638 239 SUPERFAMILY SSF53167 1 234 3.27E-91 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CF65_00488 ade58484f320413413a7083e37f92638 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 234 50.974 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CF65_00488 ade58484f320413413a7083e37f92638 239 Pfam PF01048 Phosphorylase superfamily 15 217 4.3E-38 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CF65_02038 f9d81b391533f74f1e3c1d65ec7e0600 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02038 f9d81b391533f74f1e3c1d65ec7e0600 65 Pfam PF01632 Ribosomal protein L35 2 58 4.0E-22 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02038 f9d81b391533f74f1e3c1d65ec7e0600 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 5.9E-24 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CF65_02038 f9d81b391533f74f1e3c1d65ec7e0600 65 SUPERFAMILY SSF143034 2 64 4.32E-22 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02038 f9d81b391533f74f1e3c1d65ec7e0600 65 Gene3D G3DSA:2.40.50.530 1 65 1.1E-19 T 14-10-2018 CF65_02038 f9d81b391533f74f1e3c1d65ec7e0600 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.798 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CF65_02038 f9d81b391533f74f1e3c1d65ec7e0600 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.7E-22 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CF65_02038 f9d81b391533f74f1e3c1d65ec7e0600 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.7E-22 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CF65_02038 f9d81b391533f74f1e3c1d65ec7e0600 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.7E-22 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CF65_02689 59c67399e13b8d24802ed2ad49545cbb 512 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 1.4E-7 T 14-10-2018 CF65_02689 59c67399e13b8d24802ed2ad49545cbb 512 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 70 95 1.4E-7 T 14-10-2018 CF65_02689 59c67399e13b8d24802ed2ad49545cbb 512 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 1.4E-7 T 14-10-2018 CF65_02689 59c67399e13b8d24802ed2ad49545cbb 512 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 98 6.7E-6 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02689 59c67399e13b8d24802ed2ad49545cbb 512 Pfam PF00361 Proton-conducting membrane transporter 130 424 3.2E-55 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_00774 6404a8a25cc5467c3cae196a1c9bd531 183 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 1.6E-60 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 CF65_00774 6404a8a25cc5467c3cae196a1c9bd531 183 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 16.608 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 CF65_00774 6404a8a25cc5467c3cae196a1c9bd531 183 Pfam PF04279 Intracellular septation protein A 1 175 4.3E-59 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 CF65_01684 d4b56aab1d31959661c9fce54e4fc980 226 SMART SM00382 43 219 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01684 d4b56aab1d31959661c9fce54e4fc980 226 SUPERFAMILY SSF52540 28 222 5.1E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01684 d4b56aab1d31959661c9fce54e4fc980 226 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01684 d4b56aab1d31959661c9fce54e4fc980 226 Pfam PF00005 ABC transporter 34 169 2.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01684 d4b56aab1d31959661c9fce54e4fc980 226 Gene3D G3DSA:3.40.50.300 21 226 7.1E-58 T 14-10-2018 CF65_02195 8ddd8e19dc47ee6bddba0d6d3b16c097 598 SUPERFAMILY SSF51569 1 300 3.85E-88 T 14-10-2018 CF65_02195 8ddd8e19dc47ee6bddba0d6d3b16c097 598 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 554 571 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CF65_02195 8ddd8e19dc47ee6bddba0d6d3b16c097 598 Gene3D G3DSA:2.40.50.100 524 597 3.5E-23 T 14-10-2018 CF65_02195 8ddd8e19dc47ee6bddba0d6d3b16c097 598 SUPERFAMILY SSF89000 297 462 1.65E-46 T 14-10-2018 CF65_02195 8ddd8e19dc47ee6bddba0d6d3b16c097 598 Pfam PF02436 Conserved carboxylase domain 292 496 1.2E-54 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CF65_02195 8ddd8e19dc47ee6bddba0d6d3b16c097 598 Pfam PF00682 HMGL-like 4 270 1.5E-63 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CF65_02195 8ddd8e19dc47ee6bddba0d6d3b16c097 598 SUPERFAMILY SSF51230 522 597 1.83E-20 T 14-10-2018 IPR011053 Single hybrid motif CF65_02195 8ddd8e19dc47ee6bddba0d6d3b16c097 598 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 593 3.3E-287 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 CF65_02195 8ddd8e19dc47ee6bddba0d6d3b16c097 598 Gene3D G3DSA:3.20.20.70 1 464 1.7E-167 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02195 8ddd8e19dc47ee6bddba0d6d3b16c097 598 Pfam PF00364 Biotin-requiring enzyme 532 597 3.7E-16 T 14-10-2018 IPR000089 Biotin/lipoyl attachment CF65_00471 bc2e486f64435b6dca17b902a57e491a 214 Gene3D G3DSA:3.90.870.10 1 213 1.2E-89 T 14-10-2018 CF65_00471 bc2e486f64435b6dca17b902a57e491a 214 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 40.778 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CF65_00471 bc2e486f64435b6dca17b902a57e491a 214 SUPERFAMILY SSF55821 8 212 1.49E-83 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CF65_00471 bc2e486f64435b6dca17b902a57e491a 214 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 208 4.9E-82 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CF65_00471 bc2e486f64435b6dca17b902a57e491a 214 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 209 5.2E-81 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CF65_00377 fa5fd88ecf8f5e44b7d8701f3d46870c 393 Pfam PF02803 Thiolase, C-terminal domain 270 392 2.8E-51 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CF65_00377 fa5fd88ecf8f5e44b7d8701f3d46870c 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CF65_00377 fa5fd88ecf8f5e44b7d8701f3d46870c 393 Gene3D G3DSA:3.40.47.10 5 276 3.0E-161 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_00377 fa5fd88ecf8f5e44b7d8701f3d46870c 393 SUPERFAMILY SSF53901 4 270 2.5E-90 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_00377 fa5fd88ecf8f5e44b7d8701f3d46870c 393 Gene3D G3DSA:3.40.47.10 126 390 3.0E-161 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_00377 fa5fd88ecf8f5e44b7d8701f3d46870c 393 PIRSF PIRSF000429 1 393 5.3E-137 T 14-10-2018 IPR002155 Thiolase GO:0016747 CF65_00377 fa5fd88ecf8f5e44b7d8701f3d46870c 393 Pfam PF00108 Thiolase, N-terminal domain 4 263 2.0E-107 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CF65_00377 fa5fd88ecf8f5e44b7d8701f3d46870c 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 CF65_00377 fa5fd88ecf8f5e44b7d8701f3d46870c 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 2.6E-152 T 14-10-2018 IPR002155 Thiolase GO:0016747 CF65_00377 fa5fd88ecf8f5e44b7d8701f3d46870c 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CF65_00377 fa5fd88ecf8f5e44b7d8701f3d46870c 393 SUPERFAMILY SSF53901 271 392 2.66E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_02823 4d71397fe672de760be697ec27c9ec25 1129 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1066 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CF65_02823 4d71397fe672de760be697ec27c9ec25 1129 Gene3D G3DSA:1.10.10.990 873 941 3.7E-7 T 14-10-2018 CF65_02823 4d71397fe672de760be697ec27c9ec25 1129 Gene3D G3DSA:3.40.50.10930 4 340 3.3E-108 T 14-10-2018 CF65_02823 4d71397fe672de760be697ec27c9ec25 1129 SUPERFAMILY SSF52980 834 1125 2.41E-59 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CF65_02823 4d71397fe672de760be697ec27c9ec25 1129 Gene3D G3DSA:3.40.50.300 358 814 4.2E-166 T 14-10-2018 CF65_02823 4d71397fe672de760be697ec27c9ec25 1129 Gene3D G3DSA:1.10.10.160 79 209 3.3E-108 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily CF65_02823 4d71397fe672de760be697ec27c9ec25 1129 PIRSF PIRSF000980 1 1129 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CF65_02823 4d71397fe672de760be697ec27c9ec25 1129 SUPERFAMILY SSF52540 378 819 1.44E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02823 4d71397fe672de760be697ec27c9ec25 1129 SUPERFAMILY SSF52540 2 370 1.27E-102 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02823 4d71397fe672de760be697ec27c9ec25 1129 Gene3D G3DSA:1.10.486.10 469 672 4.2E-166 T 14-10-2018 CF65_02823 4d71397fe672de760be697ec27c9ec25 1129 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 812 7.5E-288 T 14-10-2018 CF65_02823 4d71397fe672de760be697ec27c9ec25 1129 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1128 19.547 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CF65_02426 74a1684b9fbce94cf230a744e604e261 828 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 4 826 5.2E-302 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CF65_02426 74a1684b9fbce94cf230a744e604e261 828 SUPERFAMILY SSF81593 143 245 4.39E-8 T 14-10-2018 CF65_02426 74a1684b9fbce94cf230a744e604e261 828 Pfam PF01966 HD domain 411 544 1.3E-12 T 14-10-2018 IPR006674 HD domain CF65_02426 74a1684b9fbce94cf230a744e604e261 828 Pfam PF08335 GlnD PII-uridylyltransferase 137 274 9.1E-30 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CF65_02426 74a1684b9fbce94cf230a744e604e261 828 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 828 277.365 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CF65_02426 74a1684b9fbce94cf230a744e604e261 828 SUPERFAMILY SSF55021 651 719 9.58E-7 T 14-10-2018 CF65_02426 74a1684b9fbce94cf230a744e604e261 828 Gene3D G3DSA:1.10.3210.10 401 567 6.8E-8 T 14-10-2018 CF65_02426 74a1684b9fbce94cf230a744e604e261 828 SUPERFAMILY SSF55021 756 823 7.5E-9 T 14-10-2018 CF65_02426 74a1684b9fbce94cf230a744e604e261 828 SUPERFAMILY SSF109604 376 518 2.2E-15 T 14-10-2018 CF65_02426 74a1684b9fbce94cf230a744e604e261 828 SMART SM00471 407 554 1.5E-10 T 14-10-2018 IPR003607 HD/PDEase domain CF65_02426 74a1684b9fbce94cf230a744e604e261 828 Pfam PF03445 Putative nucleotidyltransferase DUF294 8 80 2.4E-4 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 CF65_02426 74a1684b9fbce94cf230a744e604e261 828 PIRSF PIRSF006288 1 828 4.7E-286 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CF65_02426 74a1684b9fbce94cf230a744e604e261 828 SUPERFAMILY SSF81301 8 132 1.34E-17 T 14-10-2018 CF65_02792 922a1f859eb4063e151dc5d8e306dde7 447 Gene3D G3DSA:1.20.1250.20 19 221 4.0E-39 T 14-10-2018 CF65_02792 922a1f859eb4063e151dc5d8e306dde7 447 SUPERFAMILY SSF103473 20 444 2.22E-69 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_02792 922a1f859eb4063e151dc5d8e306dde7 447 PIRSF PIRSF002808 9 447 7.4E-104 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CF65_02792 922a1f859eb4063e151dc5d8e306dde7 447 Pfam PF07690 Major Facilitator Superfamily 35 389 4.3E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CF65_02792 922a1f859eb4063e151dc5d8e306dde7 447 Gene3D G3DSA:1.20.1250.20 236 445 3.5E-37 T 14-10-2018 CF65_01534 ff5606bc836ec4264fc543571a04021b 374 SMART SM00954 101 221 3.2E-18 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 CF65_01534 ff5606bc836ec4264fc543571a04021b 374 Pfam PF04607 Region found in RelA / SpoT proteins 101 209 2.8E-19 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 CF65_01534 ff5606bc836ec4264fc543571a04021b 374 SUPERFAMILY SSF81301 79 248 5.4E-25 T 14-10-2018 CF65_01534 ff5606bc836ec4264fc543571a04021b 374 Gene3D G3DSA:3.30.460.10 46 202 2.3E-21 T 14-10-2018 CF65_00647 7ac716c254c39652b38c30ab8363049c 299 SUPERFAMILY SSF53335 3 291 5.49E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00647 7ac716c254c39652b38c30ab8363049c 299 Gene3D G3DSA:1.10.8.10 1 87 4.4E-23 T 14-10-2018 CF65_00647 7ac716c254c39652b38c30ab8363049c 299 Gene3D G3DSA:3.40.50.150 89 293 1.9E-52 T 14-10-2018 CF65_00647 7ac716c254c39652b38c30ab8363049c 299 Pfam PF13847 Methyltransferase domain 123 270 1.0E-18 T 14-10-2018 IPR025714 Methyltransferase domain CF65_00647 7ac716c254c39652b38c30ab8363049c 299 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 293 41.58 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CF65_00647 7ac716c254c39652b38c30ab8363049c 299 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 26 289 8.1E-81 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CF65_00647 7ac716c254c39652b38c30ab8363049c 299 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 2 295 1.2E-89 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CF65_00647 7ac716c254c39652b38c30ab8363049c 299 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 198 204 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CF65_01885 94b68e3d94c834707b07faafac59da3a 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 2.8E-35 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CF65_01885 94b68e3d94c834707b07faafac59da3a 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 1.8E-33 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CF65_01885 94b68e3d94c834707b07faafac59da3a 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 21.531 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CF65_01885 94b68e3d94c834707b07faafac59da3a 113 Gene3D G3DSA:3.30.2320.80 1 113 6.5E-32 T 14-10-2018 CF65_01885 94b68e3d94c834707b07faafac59da3a 113 PIRSF PIRSF004761 1 113 1.4E-35 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 CF65_00174 f4aeaad6c286999d1dfcf4f64ff0c356 294 Gene3D G3DSA:3.40.50.150 101 293 2.3E-58 T 14-10-2018 CF65_00174 f4aeaad6c286999d1dfcf4f64ff0c356 294 SUPERFAMILY SSF53335 45 277 5.58E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00174 f4aeaad6c286999d1dfcf4f64ff0c356 294 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 5.4E-123 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CF65_00174 f4aeaad6c286999d1dfcf4f64ff0c356 294 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 291 1.4E-105 T 14-10-2018 CF65_00174 f4aeaad6c286999d1dfcf4f64ff0c356 294 PIRSF PIRSF000401 1 294 1.1E-96 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CF65_00174 f4aeaad6c286999d1dfcf4f64ff0c356 294 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.983 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 PIRSF PIRSF002111 1 526 2.4E-208 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 SMART SM00316 275 347 8.8E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 SMART SM00316 362 434 1.8E-19 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 SMART SM00316 19 87 2.9E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 SMART SM00316 103 171 1.1E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 SMART SM00316 449 512 1.0E-11 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 SMART SM00316 190 260 3.3E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 Gene3D G3DSA:2.40.50.140 6 98 1.8E-14 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 SUPERFAMILY SSF50249 429 529 8.17E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 Gene3D G3DSA:2.40.50.140 187 268 5.5E-28 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.5E-91 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.5E-91 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.5E-91 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.5E-91 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.5E-91 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.5E-91 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.5E-91 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.5E-91 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.5E-91 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 512 3.2E-222 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 Gene3D G3DSA:2.40.50.140 269 357 3.1E-29 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 Gene3D G3DSA:2.40.50.140 358 444 1.7E-23 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 SUPERFAMILY SSF50249 255 364 2.0E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 Pfam PF00575 S1 RNA binding domain 449 511 5.4E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 Pfam PF00575 S1 RNA binding domain 191 260 7.0E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 Pfam PF00575 S1 RNA binding domain 108 171 2.4E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 Pfam PF00575 S1 RNA binding domain 274 347 1.4E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 Pfam PF00575 S1 RNA binding domain 19 78 3.8E-5 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 Pfam PF00575 S1 RNA binding domain 361 434 2.9E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 SUPERFAMILY SSF50249 190 276 1.12E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 SUPERFAMILY SSF50249 342 440 4.48E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 SUPERFAMILY SSF50249 104 185 6.94E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 SUPERFAMILY SSF50249 1 112 1.85E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 Gene3D G3DSA:2.40.50.140 99 178 1.2E-6 T 14-10-2018 CF65_02528 5ff8d5b3a242aaca029fdfbcc9c6416f 548 Gene3D G3DSA:2.40.50.140 445 520 1.9E-8 T 14-10-2018 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 Gene3D G3DSA:1.10.730.10 10 790 0.0 T 14-10-2018 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 Gene3D G3DSA:3.10.20.590 798 861 8.0E-22 T 14-10-2018 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.086 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 Pfam PF08264 Anticodon-binding domain of tRNA 701 823 8.2E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 6.0E-29 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 572 3.2E-6 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 1.3E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 Gene3D G3DSA:3.40.50.620 33 566 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 SUPERFAMILY SSF47323 662 860 2.99E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 2.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 2.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 2.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 2.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 2.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 2.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 2.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 Gene3D G3DSA:3.10.330.110 567 628 0.0 T 14-10-2018 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 860 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 SUPERFAMILY SSF52374 5 668 8.85E-144 T 14-10-2018 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 SUPERFAMILY SSF50677 226 415 1.05E-55 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CF65_01090 8a150d6a50fef15affc49e5e01a3038d 862 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 1.6E-77 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CF65_02733 1f82ed7d4443a0225d10344e746c9cf6 914 Gene3D G3DSA:1.10.10.10 842 908 1.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02733 1f82ed7d4443a0225d10344e746c9cf6 914 Pfam PF01580 FtsK/SpoIIIE family 533 746 1.3E-74 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CF65_02733 1f82ed7d4443a0225d10344e746c9cf6 914 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 22 181 1.2E-20 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region CF65_02733 1f82ed7d4443a0225d10344e746c9cf6 914 ProDom PD414759 MEMBRANE CELL TRANSLOCASE DNA TRANSMEMBRANE FTSK DNA-BINDING NUCLEOTIDE-BINDING ATP-BINDING INNER 128 308 9.0E-25 T 14-10-2018 CF65_02733 1f82ed7d4443a0225d10344e746c9cf6 914 SUPERFAMILY SSF52540 506 819 1.24E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02733 1f82ed7d4443a0225d10344e746c9cf6 914 SMART SM00843 848 912 1.1E-33 T 14-10-2018 IPR018541 FtsK gamma domain CF65_02733 1f82ed7d4443a0225d10344e746c9cf6 914 SUPERFAMILY SSF46785 849 911 2.23E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_02733 1f82ed7d4443a0225d10344e746c9cf6 914 Pfam PF09397 Ftsk gamma domain 850 909 1.7E-24 T 14-10-2018 IPR018541 FtsK gamma domain CF65_02733 1f82ed7d4443a0225d10344e746c9cf6 914 Gene3D G3DSA:3.40.50.300 530 832 6.3E-121 T 14-10-2018 CF65_02733 1f82ed7d4443a0225d10344e746c9cf6 914 Gene3D G3DSA:3.30.980.40 425 529 3.7E-33 T 14-10-2018 CF65_00575 768908e8315a2dd45857c33c0f3f86bc 266 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 5 87 1.2E-18 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CF65_00575 768908e8315a2dd45857c33c0f3f86bc 266 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 2 265 1.2E-93 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CF65_00575 768908e8315a2dd45857c33c0f3f86bc 266 SUPERFAMILY SSF51735 101 265 3.81E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_00575 768908e8315a2dd45857c33c0f3f86bc 266 Gene3D G3DSA:3.40.50.720 114 236 1.1E-77 T 14-10-2018 CF65_00575 768908e8315a2dd45857c33c0f3f86bc 266 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 189 8.9E-11 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CF65_00575 768908e8315a2dd45857c33c0f3f86bc 266 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 265 26.708 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CF65_00575 768908e8315a2dd45857c33c0f3f86bc 266 Gene3D G3DSA:3.40.50.10860 4 254 1.1E-77 T 14-10-2018 CF65_00575 768908e8315a2dd45857c33c0f3f86bc 266 SUPERFAMILY SSF53223 2 100 4.95E-26 T 14-10-2018 CF65_02003 7639251ced1df53ecba9f49790419bfc 332 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 332 60.209 T 14-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 CF65_02003 7639251ced1df53ecba9f49790419bfc 332 Gene3D G3DSA:3.40.50.2300 69 321 2.0E-89 T 14-10-2018 CF65_02003 7639251ced1df53ecba9f49790419bfc 332 Gene3D G3DSA:1.10.260.40 3 59 1.8E-24 T 14-10-2018 CF65_02003 7639251ced1df53ecba9f49790419bfc 332 SUPERFAMILY SSF47413 1 59 2.92E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_02003 7639251ced1df53ecba9f49790419bfc 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 CF65_02003 7639251ced1df53ecba9f49790419bfc 332 SUPERFAMILY SSF53822 60 330 1.32E-93 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_02003 7639251ced1df53ecba9f49790419bfc 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CF65_02003 7639251ced1df53ecba9f49790419bfc 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CF65_02003 7639251ced1df53ecba9f49790419bfc 332 SMART SM00354 1 71 2.0E-36 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CF65_02003 7639251ced1df53ecba9f49790419bfc 332 Pfam PF13377 Periplasmic binding protein-like domain 169 329 9.5E-42 T 14-10-2018 CF65_02003 7639251ced1df53ecba9f49790419bfc 332 Gene3D G3DSA:3.40.50.2300 160 322 2.0E-89 T 14-10-2018 CF65_02003 7639251ced1df53ecba9f49790419bfc 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 PIRSF PIRSF019574 1 348 6.6E-118 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 Gene3D G3DSA:3.40.190.10 133 322 1.1E-118 T 14-10-2018 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 249 268 8.5E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 8.5E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 8.5E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 168 187 8.5E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 205 224 8.5E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 8.5E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 8.5E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 150 164 8.5E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 294 320 8.5E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 8.5E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 Gene3D G3DSA:3.40.190.10 31 316 1.1E-118 T 14-10-2018 CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 Pfam PF13416 Bacterial extracellular solute-binding protein 42 315 3.2E-42 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein CF65_01479 e721f8aea4dc12cc3eea2d1065db9e66 348 SUPERFAMILY SSF53850 27 346 2.17E-95 T 14-10-2018 CF65_02485 f2abe3bcb825080fde36a3e2c94734af 295 SUPERFAMILY SSF54523 199 295 6.28E-19 T 14-10-2018 CF65_02485 f2abe3bcb825080fde36a3e2c94734af 295 PRINTS PR01804 Ubiquitous surface protein signature 74 96 1.4E-6 T 14-10-2018 IPR008378 Ubiquitous surface protein CF65_02485 f2abe3bcb825080fde36a3e2c94734af 295 PRINTS PR01804 Ubiquitous surface protein signature 263 276 1.4E-6 T 14-10-2018 IPR008378 Ubiquitous surface protein CF65_02485 f2abe3bcb825080fde36a3e2c94734af 295 PRINTS PR01804 Ubiquitous surface protein signature 57 71 1.4E-6 T 14-10-2018 IPR008378 Ubiquitous surface protein CF65_02485 f2abe3bcb825080fde36a3e2c94734af 295 PRINTS PR01804 Ubiquitous surface protein signature 210 224 1.4E-6 T 14-10-2018 IPR008378 Ubiquitous surface protein CF65_02485 f2abe3bcb825080fde36a3e2c94734af 295 Gene3D G3DSA:3.30.1300.30 190 295 5.5E-28 T 14-10-2018 CF65_02485 f2abe3bcb825080fde36a3e2c94734af 295 Pfam PF03895 YadA-like membrane anchor domain 235 295 6.5E-15 T 14-10-2018 IPR005594 YadA-like, C-terminal CF65_00198 7d5b9359a6945d5e5b16591e6b4b7e57 175 Gene3D G3DSA:3.40.140.10 2 169 2.3E-58 T 14-10-2018 CF65_00198 7d5b9359a6945d5e5b16591e6b4b7e57 175 SUPERFAMILY SSF53927 4 159 9.03E-53 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CF65_00198 7d5b9359a6945d5e5b16591e6b4b7e57 175 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 13 155 46.775 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CF65_00198 7d5b9359a6945d5e5b16591e6b4b7e57 175 Pfam PF14437 MafB19-like deaminase 9 155 2.5E-27 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CF65_00198 7d5b9359a6945d5e5b16591e6b4b7e57 175 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CF65_02935 44bd07bb99fb5a6ba71894856dce4f68 337 SUPERFAMILY SSF53807 16 335 2.79E-69 T 14-10-2018 CF65_02935 44bd07bb99fb5a6ba71894856dce4f68 337 Gene3D G3DSA:3.40.50.1980 25 140 2.2E-33 T 14-10-2018 CF65_02935 44bd07bb99fb5a6ba71894856dce4f68 337 Gene3D G3DSA:3.40.50.1980 141 224 6.3E-16 T 14-10-2018 CF65_02935 44bd07bb99fb5a6ba71894856dce4f68 337 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 333 1.1E-60 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CF65_02935 44bd07bb99fb5a6ba71894856dce4f68 337 Gene3D G3DSA:3.40.50.1980 225 337 5.3E-37 T 14-10-2018 CF65_00414 cf5d443eeda2f8fd0b1f885d5cb30905 185 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 3 178 1.7E-89 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CF65_00414 cf5d443eeda2f8fd0b1f885d5cb30905 185 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 147 9.1E-40 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CF65_00414 cf5d443eeda2f8fd0b1f885d5cb30905 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 152 1.1E-39 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CF65_00414 cf5d443eeda2f8fd0b1f885d5cb30905 185 SUPERFAMILY SSF56784 1 180 8.27E-54 T 14-10-2018 IPR036412 HAD-like superfamily CF65_00414 cf5d443eeda2f8fd0b1f885d5cb30905 185 PIRSF PIRSF004682 1 184 5.8E-69 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CF65_00414 cf5d443eeda2f8fd0b1f885d5cb30905 185 Gene3D G3DSA:3.40.50.1000 2 185 3.6E-65 T 14-10-2018 IPR023214 HAD superfamily CF65_00414 cf5d443eeda2f8fd0b1f885d5cb30905 185 Pfam PF13242 HAD-hyrolase-like 106 176 6.8E-13 T 14-10-2018 CF65_02014 fcd396b6c65abe1c09ce83dd58af1e5e 164 SMART SM00749 102 163 7.1E-7 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria CF65_02014 fcd396b6c65abe1c09ce83dd58af1e5e 164 SMART SM00749 24 87 6.9E-8 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria CF65_02014 fcd396b6c65abe1c09ce83dd58af1e5e 164 Pfam PF04972 BON domain 19 88 2.0E-18 T 14-10-2018 IPR007055 BON domain CF65_02014 fcd396b6c65abe1c09ce83dd58af1e5e 164 Pfam PF04972 BON domain 98 160 3.5E-17 T 14-10-2018 IPR007055 BON domain CF65_00326 d266cda8b38abd06c86e4e7c987f6c52 205 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CF65_00326 d266cda8b38abd06c86e4e7c987f6c52 205 Pfam PF01323 DSBA-like thioredoxin domain 42 179 1.6E-24 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CF65_00326 d266cda8b38abd06c86e4e7c987f6c52 205 Gene3D G3DSA:3.40.30.10 24 205 1.3E-45 T 14-10-2018 CF65_00326 d266cda8b38abd06c86e4e7c987f6c52 205 SUPERFAMILY SSF52833 21 202 3.34E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_00326 d266cda8b38abd06c86e4e7c987f6c52 205 PIRSF PIRSF001488 1 205 2.7E-74 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 Pfam PF02382 RTX N-terminal domain 15 654 0.0 T 14-10-2018 IPR018504 RTX N-terminal GO:0005509|GO:0005576|GO:0009405 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 SUPERFAMILY SSF51120 613 789 3.14E-23 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 PRINTS PR00313 NodO calcium binding signature 776 784 7.0E-13 T 14-10-2018 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 PRINTS PR00313 NodO calcium binding signature 839 848 7.0E-13 T 14-10-2018 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 PRINTS PR00313 NodO calcium binding signature 764 775 7.0E-13 T 14-10-2018 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 PRINTS PR00313 NodO calcium binding signature 812 820 7.0E-13 T 14-10-2018 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 830 845 0.22 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 748 765 0.19 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 730 747 0.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 812 828 0.0035 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 785 801 0.26 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 766 783 1.4E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 817 835 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 Gene3D G3DSA:2.150.10.10 785 924 1.8E-31 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 SUPERFAMILY SSF51120 783 904 7.98E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 Pfam PF08339 RTX C-terminal domain 868 1055 1.8E-73 T 14-10-2018 IPR013550 RTX, C-terminal CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 826 844 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 489 510 1.5E-76 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 401 421 1.5E-76 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 543 567 1.5E-76 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 740 761 1.5E-76 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 279 300 1.5E-76 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 345 363 1.5E-76 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 436 452 1.5E-76 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 CF65_02806 106ff06e71b685f136fe1c2d6869d8f8 1055 Gene3D G3DSA:2.150.10.10 713 774 3.5E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_01628 5beeb5734a914f76f5f2dde8640e3687 327 Gene3D G3DSA:3.30.1330.10 2 144 5.4E-43 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CF65_01628 5beeb5734a914f76f5f2dde8640e3687 327 PIRSF PIRSF005303 1 326 3.2E-91 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CF65_01628 5beeb5734a914f76f5f2dde8640e3687 327 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 326 28.311 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CF65_01628 5beeb5734a914f76f5f2dde8640e3687 327 SUPERFAMILY SSF55326 4 139 2.99E-34 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CF65_01628 5beeb5734a914f76f5f2dde8640e3687 327 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 307 3.1E-10 T 14-10-2018 IPR010918 PurM-like, C-terminal domain CF65_01628 5beeb5734a914f76f5f2dde8640e3687 327 SUPERFAMILY SSF56042 145 304 5.83E-36 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CF65_01628 5beeb5734a914f76f5f2dde8640e3687 327 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 326 2.6E-107 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CF65_01628 5beeb5734a914f76f5f2dde8640e3687 327 Pfam PF00586 AIR synthase related protein, N-terminal domain 30 138 2.6E-22 T 14-10-2018 IPR016188 PurM-like, N-terminal domain CF65_01628 5beeb5734a914f76f5f2dde8640e3687 327 Gene3D G3DSA:3.90.650.10 146 326 4.8E-52 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CF65_01803 c1c9bd537894b749ea815e585527fffd 155 Gene3D G3DSA:3.30.1360.40 74 155 2.6E-30 T 14-10-2018 CF65_01803 c1c9bd537894b749ea815e585527fffd 155 Hamap MF_00173 Arginine repressor [argR]. 1 154 55.073 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CF65_01803 c1c9bd537894b749ea815e585527fffd 155 Gene3D G3DSA:1.10.10.10 2 73 1.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01803 c1c9bd537894b749ea815e585527fffd 155 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 150 7.2E-45 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CF65_01803 c1c9bd537894b749ea815e585527fffd 155 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 88 152 1.0E-16 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CF65_01803 c1c9bd537894b749ea815e585527fffd 155 SUPERFAMILY SSF46785 5 75 1.54E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_01803 c1c9bd537894b749ea815e585527fffd 155 Pfam PF02863 Arginine repressor, C-terminal domain 81 148 5.5E-23 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CF65_01803 c1c9bd537894b749ea815e585527fffd 155 SUPERFAMILY SSF55252 81 150 2.22E-18 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 CF65_01803 c1c9bd537894b749ea815e585527fffd 155 PRINTS PR01467 Bacterial arginine repressor signature 89 102 4.6E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CF65_01803 c1c9bd537894b749ea815e585527fffd 155 PRINTS PR01467 Bacterial arginine repressor signature 41 56 4.6E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CF65_01803 c1c9bd537894b749ea815e585527fffd 155 PRINTS PR01467 Bacterial arginine repressor signature 120 135 4.6E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CF65_01803 c1c9bd537894b749ea815e585527fffd 155 PRINTS PR01467 Bacterial arginine repressor signature 24 37 4.6E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CF65_01803 c1c9bd537894b749ea815e585527fffd 155 Pfam PF01316 Arginine repressor, DNA binding domain 8 73 3.3E-20 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CF65_01436 ba6d66c5cb8d902abf88d1a4459011bc 359 Gene3D G3DSA:3.20.20.70 2 359 2.2E-142 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_01436 ba6d66c5cb8d902abf88d1a4459011bc 359 SUPERFAMILY SSF51569 4 357 2.75E-128 T 14-10-2018 CF65_01436 ba6d66c5cb8d902abf88d1a4459011bc 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 358 2.1E-115 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CF65_01436 ba6d66c5cb8d902abf88d1a4459011bc 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CF65_01436 ba6d66c5cb8d902abf88d1a4459011bc 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CF65_01436 ba6d66c5cb8d902abf88d1a4459011bc 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 5 358 2.8E-175 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CF65_01436 ba6d66c5cb8d902abf88d1a4459011bc 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 356 1.1E-90 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CF65_01436 ba6d66c5cb8d902abf88d1a4459011bc 359 PIRSF PIRSF001359 13 359 1.4E-90 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CF65_00259 b012b9001dc080788bb345c589cd7298 155 PIRSF PIRSF004505 1 154 2.5E-40 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CF65_00259 b012b9001dc080788bb345c589cd7298 155 SUPERFAMILY SSF75217 2 153 5.08E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases CF65_00259 b012b9001dc080788bb345c589cd7298 155 Pfam PF02590 Predicted SPOUT methyltransferase 2 153 4.2E-46 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CF65_00259 b012b9001dc080788bb345c589cd7298 155 Gene3D G3DSA:3.40.1280.10 1 155 3.9E-52 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_00259 b012b9001dc080788bb345c589cd7298 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 155 3.0E-83 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CF65_00259 b012b9001dc080788bb345c589cd7298 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 26.498 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CF65_00251 09f5a85d1a6b4ae1cc118503428e7363 212 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 159 4.2E-7 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CF65_00251 09f5a85d1a6b4ae1cc118503428e7363 212 Gene3D G3DSA:3.30.930.10 1 206 1.2E-58 T 14-10-2018 CF65_00251 09f5a85d1a6b4ae1cc118503428e7363 212 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CF65_00251 09f5a85d1a6b4ae1cc118503428e7363 212 Hamap MF_00013 Octanoyltransferase [lipB]. 4 208 36.055 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CF65_00251 09f5a85d1a6b4ae1cc118503428e7363 212 PIRSF PIRSF016262 1 211 2.2E-56 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CF65_00251 09f5a85d1a6b4ae1cc118503428e7363 212 SUPERFAMILY SSF55681 3 207 1.24E-66 T 14-10-2018 CF65_00251 09f5a85d1a6b4ae1cc118503428e7363 212 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 204 4.6E-76 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CF65_00251 09f5a85d1a6b4ae1cc118503428e7363 212 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 128 5.0E-21 T 14-10-2018 CF65_00047 cbbaf1572a033e135727354393e0cd87 507 Gene3D G3DSA:1.20.140.10 334 476 9.4E-173 T 14-10-2018 CF65_00047 cbbaf1572a033e135727354393e0cd87 507 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 45 498 1.0E-257 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CF65_00047 cbbaf1572a033e135727354393e0cd87 507 Gene3D G3DSA:1.10.1130.10 49 494 9.4E-173 T 14-10-2018 CF65_00047 cbbaf1572a033e135727354393e0cd87 507 Hamap MF_01182 Cytochrome c-552 [nrfA]. 4 500 59.303 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CF65_00047 cbbaf1572a033e135727354393e0cd87 507 Pfam PF02335 Cytochrome c552 50 495 9.7E-178 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CF65_00047 cbbaf1572a033e135727354393e0cd87 507 PIRSF PIRSF000243 2 503 7.7E-128 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CF65_00047 cbbaf1572a033e135727354393e0cd87 507 SUPERFAMILY SSF48695 44 495 1.76E-153 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily CF65_02440 b825e079564f6c5877816325c9eb3a66 223 Gene3D G3DSA:3.40.50.300 3 221 5.9E-68 T 14-10-2018 CF65_02440 b825e079564f6c5877816325c9eb3a66 223 SMART SM00382 30 214 1.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02440 b825e079564f6c5877816325c9eb3a66 223 Pfam PF00005 ABC transporter 21 166 1.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02440 b825e079564f6c5877816325c9eb3a66 223 SUPERFAMILY SSF52540 5 218 1.01E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02440 b825e079564f6c5877816325c9eb3a66 223 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02797 b5ee60a479f78cf6e84a6910697d7ef7 635 Gene3D G3DSA:3.40.1190.20 11 314 3.5E-90 T 14-10-2018 IPR029056 Ribokinase-like CF65_02797 b5ee60a479f78cf6e84a6910697d7ef7 635 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 8 332 1.5E-124 T 14-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 CF65_02797 b5ee60a479f78cf6e84a6910697d7ef7 635 SUPERFAMILY SSF53613 7 332 5.61E-70 T 14-10-2018 IPR029056 Ribokinase-like CF65_02797 b5ee60a479f78cf6e84a6910697d7ef7 635 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 276 289 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CF65_02797 b5ee60a479f78cf6e84a6910697d7ef7 635 Gene3D G3DSA:2.20.150.10 16 111 3.5E-90 T 14-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 CF65_02797 b5ee60a479f78cf6e84a6910697d7ef7 635 Pfam PF00294 pfkB family carbohydrate kinase 9 324 6.4E-50 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB CF65_02797 b5ee60a479f78cf6e84a6910697d7ef7 635 Gene3D G3DSA:3.20.20.70 344 635 2.1E-55 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02797 b5ee60a479f78cf6e84a6910697d7ef7 635 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 327 634 2.5E-140 T 14-10-2018 IPR018659 Protein of unknown function DUF2090 CF65_02697 60cff002154729cf428b6921a362881d 153 SUPERFAMILY SSF53163 5 143 2.07E-33 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily CF65_02697 60cff002154729cf428b6921a362881d 153 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 6 142 2.4E-49 T 14-10-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 CF65_02697 60cff002154729cf428b6921a362881d 153 Pfam PF01750 Hydrogenase maturation protease 29 139 3.7E-24 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CF65_02697 60cff002154729cf428b6921a362881d 153 PRINTS PR00446 Hydrogen uptake protein signature 69 85 3.3E-11 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CF65_02697 60cff002154729cf428b6921a362881d 153 PRINTS PR00446 Hydrogen uptake protein signature 5 17 3.3E-11 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CF65_02697 60cff002154729cf428b6921a362881d 153 PRINTS PR00446 Hydrogen uptake protein signature 58 68 3.3E-11 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CF65_02697 60cff002154729cf428b6921a362881d 153 PRINTS PR00446 Hydrogen uptake protein signature 17 28 3.3E-11 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CF65_02697 60cff002154729cf428b6921a362881d 153 PRINTS PR00446 Hydrogen uptake protein signature 35 52 3.3E-11 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CF65_02697 60cff002154729cf428b6921a362881d 153 Gene3D G3DSA:3.40.50.1450 1 150 2.2E-51 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily CF65_02697 60cff002154729cf428b6921a362881d 153 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 7 142 2.7E-35 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1770 1848 5.4E-18 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 127 632 1.5E-180 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Pfam PF05593 RHS Repeat 1123 1156 1.2E-7 T 14-10-2018 IPR031325 RHS repeat CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Pfam PF05593 RHS Repeat 1248 1284 6.0E-8 T 14-10-2018 IPR031325 RHS repeat CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Pfam PF05593 RHS Repeat 1164 1200 1.3E-6 T 14-10-2018 IPR031325 RHS repeat CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Pfam PF05593 RHS Repeat 1269 1305 8.7E-6 T 14-10-2018 IPR031325 RHS repeat CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Gene3D G3DSA:2.30.110.50 140 442 2.7E-78 T 14-10-2018 CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 SUPERFAMILY SSF69349 554 728 6.67E-32 T 14-10-2018 CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 SUPERFAMILY SSF69255 476 563 4.45E-33 T 14-10-2018 CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Gene3D G3DSA:3.90.930.1 1209 1343 1.1E-14 T 14-10-2018 CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Gene3D G3DSA:3.90.930.1 1076 1208 5.9E-12 T 14-10-2018 CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Gene3D G3DSA:2.40.50.230 469 568 4.2E-41 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 138 615 2.3E-136 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 SUPERFAMILY SSF69279 305 477 2.55E-35 T 14-10-2018 CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Gene3D G3DSA:3.55.50.10 214 302 2.7E-78 T 14-10-2018 CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Pfam PF03527 RHS protein 1744 1779 1.5E-13 T 14-10-2018 IPR001826 RHS protein CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Gene3D G3DSA:2.180.10.10 1344 1848 5.8E-39 T 14-10-2018 CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1185 1225 0.0012 T 14-10-2018 IPR006530 YD repeat CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1123 1162 6.5E-7 T 14-10-2018 IPR006530 YD repeat CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1143 1183 9.2E-8 T 14-10-2018 IPR006530 YD repeat CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1269 1310 3.4E-7 T 14-10-2018 IPR006530 YD repeat CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1227 1267 5.8E-8 T 14-10-2018 IPR006530 YD repeat CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 SUPERFAMILY SSF69279 130 298 1.62E-47 T 14-10-2018 CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Pfam PF05954 Phage late control gene D protein (GPD) 147 441 1.2E-72 T 14-10-2018 CF65_00434 1f4a2e7365dcb0fdaa3a77674d42d692 1991 Gene3D G3DSA:3.30.1920.30 336 398 2.7E-78 T 14-10-2018 CF65_02023 f4fd2f035154c9d079fcbb3831670c6c 445 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 348 7.7E-65 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CF65_02023 f4fd2f035154c9d079fcbb3831670c6c 445 SUPERFAMILY SSF51905 1 234 5.18E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_02023 f4fd2f035154c9d079fcbb3831670c6c 445 Gene3D G3DSA:3.50.50.100 1 422 1.0E-113 T 14-10-2018 CF65_02023 f4fd2f035154c9d079fcbb3831670c6c 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 1.3E-7 T 14-10-2018 CF65_02023 f4fd2f035154c9d079fcbb3831670c6c 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.3E-7 T 14-10-2018 CF65_02023 f4fd2f035154c9d079fcbb3831670c6c 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 320 327 1.3E-7 T 14-10-2018 CF65_02023 f4fd2f035154c9d079fcbb3831670c6c 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.5E-10 T 14-10-2018 CF65_02023 f4fd2f035154c9d079fcbb3831670c6c 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 5.5E-10 T 14-10-2018 CF65_02023 f4fd2f035154c9d079fcbb3831670c6c 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 305 327 5.5E-10 T 14-10-2018 CF65_02023 f4fd2f035154c9d079fcbb3831670c6c 445 SUPERFAMILY SSF51905 180 361 1.13E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 SUPERFAMILY SSF82051 2 157 1.7E-56 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 Gene3D G3DSA:2.70.210.12 1 158 2.7E-61 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 Gene3D G3DSA:3.40.50.300 159 337 1.9E-53 T 14-10-2018 CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.53 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 6.1E-145 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 Pfam PF01018 GTP1/OBG 4 157 1.1E-57 T 14-10-2018 IPR006169 GTP1/OBG domain CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.8E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.8E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.8E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.8E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 SUPERFAMILY SSF52540 151 339 1.79E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 PIRSF PIRSF002401 1 377 1.2E-140 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 CF65_02886 5037b7150faa807d361c8a9edb97f2fa 391 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.0E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_00707 7b9e1027c61919c7de136947b1c2555a 157 SUPERFAMILY SSF46785 2 130 2.93E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00707 7b9e1027c61919c7de136947b1c2555a 157 Pfam PF02082 Transcriptional regulator 1 83 5.6E-26 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type CF65_00707 7b9e1027c61919c7de136947b1c2555a 157 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 133 4.3E-63 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CF65_00707 7b9e1027c61919c7de136947b1c2555a 157 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.7E-44 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type CF65_00707 7b9e1027c61919c7de136947b1c2555a 157 Gene3D G3DSA:1.10.10.10 1 140 1.7E-50 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02999 d2999ccd4afe648949c7e95f747f2827 259 Pfam PF03883 Peroxide stress protein YaaA 1 243 2.4E-88 T 14-10-2018 IPR005583 Peroxide stress protein YaaA CF65_02999 d2999ccd4afe648949c7e95f747f2827 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 256 36.164 T 14-10-2018 IPR005583 Peroxide stress protein YaaA CF65_00372 595850d7f251f3b5194eb7c74ec4754e 217 SUPERFAMILY SSF100950 2 215 1.62E-76 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_00372 595850d7f251f3b5194eb7c74ec4754e 217 SMART SM00882 5 216 2.7E-65 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CF65_00372 595850d7f251f3b5194eb7c74ec4754e 217 Pfam PF01144 Coenzyme A transferase 11 214 2.9E-68 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CF65_00372 595850d7f251f3b5194eb7c74ec4754e 217 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 214 1.9E-63 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CF65_00372 595850d7f251f3b5194eb7c74ec4754e 217 Gene3D G3DSA:3.40.1080.10 1 217 1.7E-81 T 14-10-2018 CF65_00372 595850d7f251f3b5194eb7c74ec4754e 217 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 CF65_02963 098233827e7241564ed5df258276f9e7 124 Gene3D G3DSA:2.40.128.200 40 122 1.5E-6 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily CF65_02963 098233827e7241564ed5df258276f9e7 124 SUPERFAMILY SSF141488 45 112 1.44E-6 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily CF65_02963 098233827e7241564ed5df258276f9e7 124 PIRSF PIRSF007352 1 124 8.1E-33 T 14-10-2018 IPR012097 Opacity-associated protein B CF65_02963 098233827e7241564ed5df258276f9e7 124 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 47 103 4.9E-9 T 14-10-2018 IPR018660 C-type lysozyme inhibitor CF65_02966 fb76bf07c4ed0abbbb62ccbf21bef202 323 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 2 320 1.5E-146 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like CF65_02966 fb76bf07c4ed0abbbb62ccbf21bef202 323 Pfam PF13394 4Fe-4S single cluster domain 99 170 8.3E-8 T 14-10-2018 CF65_02966 fb76bf07c4ed0abbbb62ccbf21bef202 323 Gene3D G3DSA:3.20.20.70 35 319 2.7E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02966 fb76bf07c4ed0abbbb62ccbf21bef202 323 PIRSF PIRSF004911 2 323 2.5E-112 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CF65_02966 fb76bf07c4ed0abbbb62ccbf21bef202 323 Pfam PF04055 Radical SAM superfamily 105 177 2.9E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CF65_02966 fb76bf07c4ed0abbbb62ccbf21bef202 323 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 314 4.0E-133 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CF65_02966 fb76bf07c4ed0abbbb62ccbf21bef202 323 SUPERFAMILY SSF102114 88 310 3.79E-27 T 14-10-2018 CF65_01559 136711cb3503655a381634cd681a646b 152 Pfam PF02631 RecX family 28 144 6.3E-31 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 CF65_01559 136711cb3503655a381634cd681a646b 152 Gene3D G3DSA:1.10.10.10 98 143 5.3E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01559 136711cb3503655a381634cd681a646b 152 Gene3D G3DSA:1.10.10.10 52 96 6.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01559 136711cb3503655a381634cd681a646b 152 Gene3D G3DSA:1.10.10.10 5 50 6.9E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01559 136711cb3503655a381634cd681a646b 152 Hamap MF_01114 Regulatory protein RecX [recX]. 1 151 13.789 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 CF65_02932 f26e45fac9a73bdee29261ab26626c2e 372 SUPERFAMILY SSF50685 57 371 2.96E-103 T 14-10-2018 IPR036908 RlpA-like domain superfamily CF65_02932 f26e45fac9a73bdee29261ab26626c2e 372 Gene3D G3DSA:2.40.40.10 75 371 3.0E-128 T 14-10-2018 IPR036908 RlpA-like domain superfamily CF65_02932 f26e45fac9a73bdee29261ab26626c2e 372 Pfam PF03562 MltA specific insert domain 133 166 4.3E-7 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CF65_02932 f26e45fac9a73bdee29261ab26626c2e 372 Pfam PF03562 MltA specific insert domain 170 275 1.9E-35 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CF65_02932 f26e45fac9a73bdee29261ab26626c2e 372 SMART SM00925 146 275 1.3E-68 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CF65_02932 f26e45fac9a73bdee29261ab26626c2e 372 Pfam PF06725 3D domain 295 371 6.6E-24 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CF65_02932 f26e45fac9a73bdee29261ab26626c2e 372 Gene3D G3DSA:2.40.240.50 146 280 3.0E-128 T 14-10-2018 CF65_02932 f26e45fac9a73bdee29261ab26626c2e 372 PIRSF PIRSF019422 1 171 2.6E-11 T 14-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CF65_02932 f26e45fac9a73bdee29261ab26626c2e 372 PIRSF PIRSF019422 167 372 6.8E-70 T 14-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CF65_02776 2529a6364ae905eda614b90e74c63dba 378 Pfam PF00155 Aminotransferase class I and II 37 368 8.3E-39 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CF65_02776 2529a6364ae905eda614b90e74c63dba 378 Gene3D G3DSA:3.90.1150.10 36 361 7.7E-98 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_02776 2529a6364ae905eda614b90e74c63dba 378 Gene3D G3DSA:3.40.640.10 50 279 7.7E-98 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_02776 2529a6364ae905eda614b90e74c63dba 378 SUPERFAMILY SSF53383 31 372 2.81E-62 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Gene3D G3DSA:2.40.50.100 1152 1215 1.3E-61 T 14-10-2018 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Pfam PF04998 RNA polymerase Rpb1, domain 5 767 1315 4.4E-77 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Gene3D G3DSA:2.40.50.100 1024 1127 1.1E-29 T 14-10-2018 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Pfam PF05000 RNA polymerase Rpb1, domain 4 675 764 2.7E-18 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Gene3D G3DSA:1.10.274.100 491 641 1.2E-36 T 14-10-2018 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Gene3D G3DSA:1.10.132.30 642 791 2.4E-66 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 SUPERFAMILY SSF64484 18 1367 0.0 T 14-10-2018 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 385 1.5E-7 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 486 3.1E-26 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 SMART SM00663 236 515 1.0E-180 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Gene3D G3DSA:2.40.50.100 949 1023 3.4E-27 T 14-10-2018 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Gene3D G3DSA:1.10.40.90 375 417 1.3E-20 T 14-10-2018 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 21 1367 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 343 5.2E-88 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Gene3D G3DSA:1.10.150.390 1316 1376 8.9E-29 T 14-10-2018 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 645 3.8E-26 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1374 18.97 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00356 d46b6e1585131c48c0b6ece8dafe4ec2 1422 Gene3D G3DSA:1.10.1790.20 1136 1314 1.3E-61 T 14-10-2018 CF65_02642 de5bff7007d66aeb2a6a06a264452cdb 208 Gene3D G3DSA:3.40.50.300 1 207 6.2E-42 T 14-10-2018 CF65_02642 de5bff7007d66aeb2a6a06a264452cdb 208 ProSitePatterns PS00211 ABC transporters family signature. 113 127 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02642 de5bff7007d66aeb2a6a06a264452cdb 208 SMART SM00382 17 205 4.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02642 de5bff7007d66aeb2a6a06a264452cdb 208 SUPERFAMILY SSF52540 2 200 2.72E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02642 de5bff7007d66aeb2a6a06a264452cdb 208 Pfam PF00005 ABC transporter 8 139 7.2E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_00675 3ce390e77d6fd6e1474ea496072d58f2 215 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CF65_00675 3ce390e77d6fd6e1474ea496072d58f2 215 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 210 9.3E-92 T 14-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 CF65_00675 3ce390e77d6fd6e1474ea496072d58f2 215 Pfam PF04399 Glutaredoxin 2, C terminal domain 85 214 9.7E-50 T 14-10-2018 IPR007494 Glutaredoxin 2, C-terminal CF65_00675 3ce390e77d6fd6e1474ea496072d58f2 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 76 4.2E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CF65_00675 3ce390e77d6fd6e1474ea496072d58f2 215 SUPERFAMILY SSF52833 1 90 1.01E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_00675 3ce390e77d6fd6e1474ea496072d58f2 215 SUPERFAMILY SSF47616 77 215 7.94E-51 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CF65_00675 3ce390e77d6fd6e1474ea496072d58f2 215 Gene3D G3DSA:1.20.1050.10 90 215 5.9E-46 T 14-10-2018 CF65_00675 3ce390e77d6fd6e1474ea496072d58f2 215 Gene3D G3DSA:3.40.30.10 8 85 2.0E-35 T 14-10-2018 CF65_01079 748a047074140e4c0893775ddaa30ea6 86 Pfam PF05258 Protein of unknown function (DUF721) 6 76 1.1E-9 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 CF65_00613 6dc795cc5e2b5306d096933815c880f3 394 Pfam PF02684 Lipid-A-disaccharide synthetase 13 385 2.3E-147 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CF65_00613 6dc795cc5e2b5306d096933815c880f3 394 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 10 388 5.1E-165 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CF65_00613 6dc795cc5e2b5306d096933815c880f3 394 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 10 390 42.988 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CF65_00613 6dc795cc5e2b5306d096933815c880f3 394 SUPERFAMILY SSF53756 13 320 8.07E-31 T 14-10-2018 CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 SMART SM00471 41 153 2.7E-11 T 14-10-2018 IPR003607 HD/PDEase domain CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 Pfam PF02824 TGS domain 389 448 3.0E-19 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 SUPERFAMILY SSF55021 633 702 5.04E-6 T 14-10-2018 CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 Pfam PF04607 Region found in RelA / SpoT proteins 235 344 3.5E-34 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 SUPERFAMILY SSF81271 376 448 7.19E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 SUPERFAMILY SSF81301 181 393 1.8E-60 T 14-10-2018 CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 Gene3D G3DSA:1.10.3210.10 3 190 4.1E-80 T 14-10-2018 CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 SMART SM00954 235 345 1.2E-59 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 Pfam PF13328 HD domain 26 175 9.7E-54 T 14-10-2018 IPR003607 HD/PDEase domain CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 Gene3D G3DSA:3.10.20.30 382 456 1.2E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 Gene3D G3DSA:3.30.460.10 193 325 4.9E-44 T 14-10-2018 CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 Gene3D G3DSA:3.30.70.260 627 707 2.2E-13 T 14-10-2018 CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 Pfam PF13291 ACT domain 628 703 1.4E-14 T 14-10-2018 IPR002912 ACT domain CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 SUPERFAMILY SSF109604 3 189 1.1E-74 T 14-10-2018 CF65_02305 2177f28e9b5c26f821087bd2d037b0c9 707 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 702 3.4E-274 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 CF65_01507 46bf71ce720d2f8e0cca332301df743c 166 SUPERFAMILY SSF52821 39 164 4.45E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily CF65_01507 46bf71ce720d2f8e0cca332301df743c 166 Pfam PF00581 Rhodanese-like domain 67 158 1.1E-13 T 14-10-2018 IPR001763 Rhodanese-like domain CF65_01507 46bf71ce720d2f8e0cca332301df743c 166 Gene3D G3DSA:3.40.250.10 45 166 3.5E-21 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily CF65_01507 46bf71ce720d2f8e0cca332301df743c 166 SMART SM00450 64 162 1.5E-14 T 14-10-2018 IPR001763 Rhodanese-like domain CF65_01654 499746c4e1d536258c3b5287c0ffbc67 396 Pfam PF13416 Bacterial extracellular solute-binding protein 48 341 1.5E-42 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein CF65_01654 499746c4e1d536258c3b5287c0ffbc67 396 SUPERFAMILY SSF53850 28 393 2.59E-92 T 14-10-2018 CF65_01654 499746c4e1d536258c3b5287c0ffbc67 396 PRINTS PR00181 Maltose binding protein signature 34 52 3.1E-78 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CF65_01654 499746c4e1d536258c3b5287c0ffbc67 396 PRINTS PR00181 Maltose binding protein signature 128 147 3.1E-78 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CF65_01654 499746c4e1d536258c3b5287c0ffbc67 396 PRINTS PR00181 Maltose binding protein signature 231 250 3.1E-78 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CF65_01654 499746c4e1d536258c3b5287c0ffbc67 396 PRINTS PR00181 Maltose binding protein signature 355 374 3.1E-78 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CF65_01654 499746c4e1d536258c3b5287c0ffbc67 396 PRINTS PR00181 Maltose binding protein signature 297 318 3.1E-78 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CF65_01654 499746c4e1d536258c3b5287c0ffbc67 396 PRINTS PR00181 Maltose binding protein signature 68 86 3.1E-78 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CF65_01654 499746c4e1d536258c3b5287c0ffbc67 396 PRINTS PR00181 Maltose binding protein signature 149 168 3.1E-78 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CF65_01654 499746c4e1d536258c3b5287c0ffbc67 396 PRINTS PR00181 Maltose binding protein signature 169 188 3.1E-78 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 CF65_01654 499746c4e1d536258c3b5287c0ffbc67 396 Gene3D G3DSA:3.40.190.10 46 355 7.0E-140 T 14-10-2018 CF65_01654 499746c4e1d536258c3b5287c0ffbc67 396 Gene3D G3DSA:3.40.190.10 136 386 7.0E-140 T 14-10-2018 CF65_01482 fec063516ef12b92acfaa87c089bd6ff 457 Gene3D G3DSA:1.10.1140.10 342 457 2.5E-60 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_01482 fec063516ef12b92acfaa87c089bd6ff 457 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 127 339 2.0E-63 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_01482 fec063516ef12b92acfaa87c089bd6ff 457 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 457 4.4E-261 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CF65_01482 fec063516ef12b92acfaa87c089bd6ff 457 Gene3D G3DSA:3.40.50.300 73 341 1.4E-113 T 14-10-2018 CF65_01482 fec063516ef12b92acfaa87c089bd6ff 457 SUPERFAMILY SSF52540 74 345 6.08E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01482 fec063516ef12b92acfaa87c089bd6ff 457 SMART SM00382 139 324 0.0023 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01482 fec063516ef12b92acfaa87c089bd6ff 457 SUPERFAMILY SSF47917 342 456 1.18E-55 T 14-10-2018 CF65_01482 fec063516ef12b92acfaa87c089bd6ff 457 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 70 1.5E-19 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_01482 fec063516ef12b92acfaa87c089bd6ff 457 Gene3D G3DSA:2.40.10.170 1 72 2.2E-26 T 14-10-2018 CF65_01482 fec063516ef12b92acfaa87c089bd6ff 457 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 457 57.13 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CF65_01482 fec063516ef12b92acfaa87c089bd6ff 457 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 330 339 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_01482 fec063516ef12b92acfaa87c089bd6ff 457 SUPERFAMILY SSF50615 1 72 4.19E-24 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_02289 514bc40d160fad4604b2f3d225e32021 639 Gene3D G3DSA:1.20.58.760 387 589 1.0E-70 T 14-10-2018 CF65_02289 514bc40d160fad4604b2f3d225e32021 639 Gene3D G3DSA:3.40.50.300 126 312 3.9E-70 T 14-10-2018 CF65_02289 514bc40d160fad4604b2f3d225e32021 639 SUPERFAMILY SSF140990 392 592 2.75E-74 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CF65_02289 514bc40d160fad4604b2f3d225e32021 639 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 1 598 37.011 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CF65_02289 514bc40d160fad4604b2f3d225e32021 639 SUPERFAMILY SSF52540 132 381 5.75E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02289 514bc40d160fad4604b2f3d225e32021 639 Pfam PF01434 Peptidase family M41 371 582 1.5E-80 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CF65_02289 514bc40d160fad4604b2f3d225e32021 639 Pfam PF06480 FtsH Extracellular 2 84 2.5E-8 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CF65_02289 514bc40d160fad4604b2f3d225e32021 639 Gene3D G3DSA:1.10.8.60 313 386 7.4E-30 T 14-10-2018 CF65_02289 514bc40d160fad4604b2f3d225e32021 639 SMART SM00382 174 313 3.6E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02289 514bc40d160fad4604b2f3d225e32021 639 Gene3D G3DSA:2.40.50.920 15 90 5.3E-25 T 14-10-2018 CF65_02289 514bc40d160fad4604b2f3d225e32021 639 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 178 310 2.9E-45 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CF65_02289 514bc40d160fad4604b2f3d225e32021 639 ProSitePatterns PS00674 AAA-protein family signature. 281 299 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CF65_02289 514bc40d160fad4604b2f3d225e32021 639 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 91 583 2.2E-247 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CF65_00508 9c203674378ce91ba5bf5a777bdb614e 236 Pfam PF05175 Methyltransferase small domain 36 162 1.3E-15 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CF65_00508 9c203674378ce91ba5bf5a777bdb614e 236 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 5 236 53.164 T 14-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 CF65_00508 9c203674378ce91ba5bf5a777bdb614e 236 SUPERFAMILY SSF53335 5 173 1.47E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00508 9c203674378ce91ba5bf5a777bdb614e 236 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 110 122 5.6E-9 T 14-10-2018 CF65_00508 9c203674378ce91ba5bf5a777bdb614e 236 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 140 164 5.6E-9 T 14-10-2018 CF65_00508 9c203674378ce91ba5bf5a777bdb614e 236 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 42 56 5.6E-9 T 14-10-2018 CF65_00508 9c203674378ce91ba5bf5a777bdb614e 236 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 113 119 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CF65_00508 9c203674378ce91ba5bf5a777bdb614e 236 Gene3D G3DSA:3.40.50.150 5 233 6.6E-57 T 14-10-2018 CF65_01894 20609056ffe86fdd45486e9f4e42f015 137 PRINTS PR00189 Transthyretin signature 115 137 3.6E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CF65_01894 20609056ffe86fdd45486e9f4e42f015 137 PRINTS PR00189 Transthyretin signature 25 45 3.6E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CF65_01894 20609056ffe86fdd45486e9f4e42f015 137 SUPERFAMILY SSF49472 20 137 3.53E-36 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CF65_01894 20609056ffe86fdd45486e9f4e42f015 137 ProSitePatterns PS00769 Transthyretin signature 2. 120 132 - T 14-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CF65_01894 20609056ffe86fdd45486e9f4e42f015 137 SMART SM00095 21 136 8.0E-4 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CF65_01894 20609056ffe86fdd45486e9f4e42f015 137 ProSitePatterns PS00768 Transthyretin signature 1. 29 44 - T 14-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CF65_01894 20609056ffe86fdd45486e9f4e42f015 137 Pfam PF00576 HIUase/Transthyretin family 26 136 3.3E-36 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CF65_01894 20609056ffe86fdd45486e9f4e42f015 137 Gene3D G3DSA:2.60.40.180 15 136 1.8E-38 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CF65_01894 20609056ffe86fdd45486e9f4e42f015 137 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 25 137 3.2E-39 T 14-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CF65_01645 910750ae869ee7eb383258f51a86a570 363 Gene3D G3DSA:3.40.50.300 13 256 7.2E-78 T 14-10-2018 CF65_01645 910750ae869ee7eb383258f51a86a570 363 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01645 910750ae869ee7eb383258f51a86a570 363 SUPERFAMILY SSF50331 257 359 3.68E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01645 910750ae869ee7eb383258f51a86a570 363 SUPERFAMILY SSF52540 22 259 7.93E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01645 910750ae869ee7eb383258f51a86a570 363 SMART SM00382 46 229 3.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01645 910750ae869ee7eb383258f51a86a570 363 Pfam PF00005 ABC transporter 37 179 4.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01517 a6927b57c8ab1ff7067c6238e9571f9c 241 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 27 140 3.1E-27 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CF65_01517 a6927b57c8ab1ff7067c6238e9571f9c 241 SUPERFAMILY SSF54534 33 238 1.81E-54 T 14-10-2018 CF65_01517 a6927b57c8ab1ff7067c6238e9571f9c 241 Gene3D G3DSA:1.10.287.460 23 129 1.4E-17 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 CF65_01517 a6927b57c8ab1ff7067c6238e9571f9c 241 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 149 235 6.2E-27 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CF65_01517 a6927b57c8ab1ff7067c6238e9571f9c 241 Gene3D G3DSA:3.10.50.40 130 241 1.3E-41 T 14-10-2018 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 Pfam PF03483 B3/4 domain 212 386 1.2E-68 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 Gene3D G3DSA:2.40.50.140 39 154 2.9E-72 T 14-10-2018 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 SUPERFAMILY SSF46955 405 476 7.32E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 SMART SM00874 404 472 5.0E-28 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 Gene3D G3DSA:3.50.40.10 197 396 9.0E-79 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 Pfam PF03484 tRNA synthetase B5 domain 407 472 6.8E-20 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 Gene3D G3DSA:3.30.56.10 7 180 2.9E-72 T 14-10-2018 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 SUPERFAMILY SSF50249 36 196 2.26E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 SMART SM00896 702 795 5.8E-44 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 Pfam PF01588 Putative tRNA binding domain 45 145 8.0E-25 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 Pfam PF03147 Ferredoxin-fold anticodon binding domain 702 795 2.3E-28 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 SMART SM00873 212 386 4.8E-94 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 Gene3D G3DSA:3.30.56.10 402 476 2.3E-26 T 14-10-2018 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 Gene3D G3DSA:3.30.930.10 486 692 7.7E-58 T 14-10-2018 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 SUPERFAMILY SSF56037 197 397 2.46E-73 T 14-10-2018 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 SUPERFAMILY SSF55681 468 688 2.73E-46 T 14-10-2018 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 SUPERFAMILY SSF54991 698 795 8.76E-30 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 795 3.2E-270 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 Gene3D G3DSA:3.30.70.380 703 796 1.2E-29 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 CF65_02164 f59e24d24d4f1567ac5ca6bd4148b086 796 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 789 45.594 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CF65_01327 ae1f22224588a82215742d7fc073b8e8 350 Gene3D G3DSA:3.40.50.2000 179 343 5.5E-16 T 14-10-2018 CF65_01327 ae1f22224588a82215742d7fc073b8e8 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 191 299 2.7E-17 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 CF65_01327 ae1f22224588a82215742d7fc073b8e8 350 SUPERFAMILY SSF53756 35 310 1.18E-34 T 14-10-2018 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 42.487 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 SMART SM00881 4 100 2.3E-35 T 14-10-2018 IPR003781 CoA-binding GO:0048037 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 2.4E-143 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 SUPERFAMILY SSF52210 123 285 3.53E-53 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 6.9E-40 T 14-10-2018 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 6.9E-40 T 14-10-2018 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 6.9E-40 T 14-10-2018 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 6.9E-40 T 14-10-2018 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 Gene3D G3DSA:3.40.50.261 124 289 2.7E-73 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 Pfam PF02629 CoA binding domain 6 99 2.3E-30 T 14-10-2018 IPR003781 CoA-binding GO:0048037 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 SUPERFAMILY SSF51735 1 122 1.09E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 Pfam PF00549 CoA-ligase 151 270 9.3E-21 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 PIRSF PIRSF001553 1 290 1.1E-132 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CF65_02700 ffd4e835f09ef0d3c88110cfc30ec158 290 Gene3D G3DSA:3.40.50.720 1 123 5.2E-51 T 14-10-2018 CF65_01371 4f7e1b51901211de5f39d2a6b1844890 351 Gene3D G3DSA:3.30.420.40 15 334 4.9E-124 T 14-10-2018 CF65_01371 4f7e1b51901211de5f39d2a6b1844890 351 SUPERFAMILY SSF53067 10 151 9.46E-36 T 14-10-2018 CF65_01371 4f7e1b51901211de5f39d2a6b1844890 351 Gene3D G3DSA:3.30.420.40 159 324 4.9E-124 T 14-10-2018 CF65_01371 4f7e1b51901211de5f39d2a6b1844890 351 Gene3D G3DSA:3.90.640.10 191 266 4.9E-124 T 14-10-2018 CF65_01371 4f7e1b51901211de5f39d2a6b1844890 351 SUPERFAMILY SSF53067 155 343 2.33E-47 T 14-10-2018 CF65_01371 4f7e1b51901211de5f39d2a6b1844890 351 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 342 5.5E-165 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CF65_01371 4f7e1b51901211de5f39d2a6b1844890 351 Pfam PF06723 MreB/Mbl protein 12 341 6.5E-140 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CF65_01371 4f7e1b51901211de5f39d2a6b1844890 351 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 7.8E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CF65_01371 4f7e1b51901211de5f39d2a6b1844890 351 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 7.8E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CF65_01371 4f7e1b51901211de5f39d2a6b1844890 351 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 7.8E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CF65_01371 4f7e1b51901211de5f39d2a6b1844890 351 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 307 333 7.8E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CF65_01371 4f7e1b51901211de5f39d2a6b1844890 351 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 7.8E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CF65_01014 b381e9842c3e235119c1b290608975ae 295 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 1 269 1.4E-116 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CF65_01014 b381e9842c3e235119c1b290608975ae 295 Pfam PF00483 Nucleotidyl transferase 2 263 4.1E-25 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CF65_01014 b381e9842c3e235119c1b290608975ae 295 SUPERFAMILY SSF53448 1 280 3.15E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01014 b381e9842c3e235119c1b290608975ae 295 Gene3D G3DSA:3.90.550.10 1 295 6.4E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01072 b564fd50790927c3a4f3b06430991b66 743 Gene3D G3DSA:3.10.20.30 401 474 1.1E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily CF65_01072 b564fd50790927c3a4f3b06430991b66 743 SUPERFAMILY SSF109604 54 210 2.42E-43 T 14-10-2018 CF65_01072 b564fd50790927c3a4f3b06430991b66 743 Gene3D G3DSA:1.10.3210.10 39 210 8.1E-37 T 14-10-2018 CF65_01072 b564fd50790927c3a4f3b06430991b66 743 SUPERFAMILY SSF81271 400 466 1.55E-21 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CF65_01072 b564fd50790927c3a4f3b06430991b66 743 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 66 742 8.8E-186 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 CF65_01072 b564fd50790927c3a4f3b06430991b66 743 Pfam PF13328 HD domain 40 194 2.9E-38 T 14-10-2018 IPR003607 HD/PDEase domain CF65_01072 b564fd50790927c3a4f3b06430991b66 743 Gene3D G3DSA:3.30.70.260 665 743 4.9E-17 T 14-10-2018 CF65_01072 b564fd50790927c3a4f3b06430991b66 743 SUPERFAMILY SSF81301 199 411 2.94E-64 T 14-10-2018 CF65_01072 b564fd50790927c3a4f3b06430991b66 743 Pfam PF13291 ACT domain 666 742 4.9E-18 T 14-10-2018 IPR002912 ACT domain CF65_01072 b564fd50790927c3a4f3b06430991b66 743 Pfam PF02824 TGS domain 407 466 1.6E-21 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CF65_01072 b564fd50790927c3a4f3b06430991b66 743 SMART SM00954 254 364 7.5E-67 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 CF65_01072 b564fd50790927c3a4f3b06430991b66 743 Pfam PF04607 Region found in RelA / SpoT proteins 254 363 7.9E-38 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 CF65_01072 b564fd50790927c3a4f3b06430991b66 743 Gene3D G3DSA:3.30.460.10 212 344 4.4E-49 T 14-10-2018 CF65_01072 b564fd50790927c3a4f3b06430991b66 743 SUPERFAMILY SSF55021 667 742 2.91E-12 T 14-10-2018 CF65_02597 e408cd4eba51376788f505c65abc5e58 385 Pfam PF01612 3'-5' exonuclease 16 181 1.7E-40 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CF65_02597 e408cd4eba51376788f505c65abc5e58 385 SMART SM00341 222 302 1.2E-6 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CF65_02597 e408cd4eba51376788f505c65abc5e58 385 Gene3D G3DSA:1.10.150.80 207 305 3.9E-16 T 14-10-2018 CF65_02597 e408cd4eba51376788f505c65abc5e58 385 Hamap MF_01899 Ribonuclease D [rnd]. 14 382 44.216 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CF65_02597 e408cd4eba51376788f505c65abc5e58 385 Gene3D G3DSA:1.10.150.80 306 384 2.3E-17 T 14-10-2018 CF65_02597 e408cd4eba51376788f505c65abc5e58 385 SUPERFAMILY SSF53098 12 222 4.55E-66 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_02597 e408cd4eba51376788f505c65abc5e58 385 SUPERFAMILY SSF47819 308 380 5.67E-16 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CF65_02597 e408cd4eba51376788f505c65abc5e58 385 TIGRFAM TIGR01388 rnd: ribonuclease D 16 381 2.5E-122 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CF65_02597 e408cd4eba51376788f505c65abc5e58 385 Pfam PF00570 HRDC domain 226 291 1.5E-11 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CF65_02597 e408cd4eba51376788f505c65abc5e58 385 SUPERFAMILY SSF47819 206 311 5.89E-25 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CF65_02597 e408cd4eba51376788f505c65abc5e58 385 Gene3D G3DSA:3.30.420.10 13 205 1.5E-65 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CF65_02597 e408cd4eba51376788f505c65abc5e58 385 SMART SM00474 14 182 1.6E-47 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CF65_01843 a48eb43924dcdf1d72bd61f6245c770b 458 SMART SM00387 352 458 3.6E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_01843 a48eb43924dcdf1d72bd61f6245c770b 458 Gene3D G3DSA:1.10.287.130 188 307 5.7E-19 T 14-10-2018 CF65_01843 a48eb43924dcdf1d72bd61f6245c770b 458 Gene3D G3DSA:1.20.5.1040 3 66 9.6E-10 T 14-10-2018 CF65_01843 a48eb43924dcdf1d72bd61f6245c770b 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 6.0E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CF65_01843 a48eb43924dcdf1d72bd61f6245c770b 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 6.0E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CF65_01843 a48eb43924dcdf1d72bd61f6245c770b 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 440 1.8E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_01843 a48eb43924dcdf1d72bd61f6245c770b 458 SUPERFAMILY SSF47384 223 305 1.73E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CF65_01843 a48eb43924dcdf1d72bd61f6245c770b 458 SMART SM00388 240 306 1.3E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CF65_01843 a48eb43924dcdf1d72bd61f6245c770b 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 305 1.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CF65_01843 a48eb43924dcdf1d72bd61f6245c770b 458 SUPERFAMILY SSF55874 295 444 8.51E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_01843 a48eb43924dcdf1d72bd61f6245c770b 458 Pfam PF08521 Two-component sensor kinase N-terminal 25 163 6.7E-7 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal CF65_01843 a48eb43924dcdf1d72bd61f6245c770b 458 Gene3D G3DSA:3.30.565.10 311 452 9.5E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00263 5828f55b487505f2344de449177d7ef2 442 Pfam PF00270 DEAD/DEAH box helicase 57 227 3.7E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CF65_00263 5828f55b487505f2344de449177d7ef2 442 Gene3D G3DSA:3.40.50.300 20 244 2.7E-69 T 14-10-2018 CF65_00263 5828f55b487505f2344de449177d7ef2 442 SMART SM00490 292 373 1.2E-29 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_00263 5828f55b487505f2344de449177d7ef2 442 Gene3D G3DSA:3.40.50.300 251 437 1.8E-44 T 14-10-2018 CF65_00263 5828f55b487505f2344de449177d7ef2 442 SMART SM00487 52 253 1.6E-49 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_00263 5828f55b487505f2344de449177d7ef2 442 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 32 411 50.704 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 CF65_00263 5828f55b487505f2344de449177d7ef2 442 SUPERFAMILY SSF52540 106 385 1.35E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00263 5828f55b487505f2344de449177d7ef2 442 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 185 193 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CF65_00263 5828f55b487505f2344de449177d7ef2 442 Pfam PF00271 Helicase conserved C-terminal domain 265 373 2.9E-27 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 Gene3D G3DSA:3.30.1480.10 1 129 5.3E-43 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 SMART SM00316 133 204 1.6E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 SUPERFAMILY SSF47794 434 496 6.12E-15 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 Gene3D G3DSA:1.10.150.20 357 426 1.4E-23 T 14-10-2018 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 Gene3D G3DSA:2.40.50.140 135 202 2.8E-17 T 14-10-2018 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 2.5E-20 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 445 494 2.6E-18 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 Gene3D G3DSA:3.30.300.20 282 350 4.9E-23 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 Gene3D G3DSA:3.30.300.20 203 281 4.9E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 346 5.2E-127 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 Pfam PF08529 NusA N-terminal domain 4 123 7.3E-35 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 Gene3D G3DSA:1.10.150.20 436 495 5.3E-22 T 14-10-2018 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 Pfam PF14520 Helix-hairpin-helix domain 437 491 4.2E-9 T 14-10-2018 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 Pfam PF13184 NusA-like KH domain 234 301 6.7E-28 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 SUPERFAMILY SSF69705 1 126 2.35E-40 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 SUPERFAMILY SSF54814 205 282 2.75E-29 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 415 28.348 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 SUPERFAMILY SSF54814 283 346 1.5E-13 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 SUPERFAMILY SSF47794 358 420 8.48E-14 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CF65_01920 b539bcbbc2fe9c853da8c6e5ac2e5a5a 498 SUPERFAMILY SSF50249 132 203 2.38E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 SUPERFAMILY SSF54980 407 485 1.12E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 SUPERFAMILY SSF54211 484 606 1.24E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 Pfam PF03764 Elongation factor G, domain IV 484 605 1.9E-47 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 Gene3D G3DSA:3.30.70.870 410 488 2.2E-33 T 14-10-2018 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 SMART SM00838 607 694 1.8E-51 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 Pfam PF00679 Elongation factor G C-terminus 607 692 1.3E-27 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 113.82 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 Gene3D G3DSA:3.30.70.240 611 681 3.3E-84 T 14-10-2018 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 Gene3D G3DSA:3.30.230.10 489 694 3.3E-84 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 700 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 SMART SM00889 485 605 6.0E-74 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 3.5E-32 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 Gene3D G3DSA:2.40.30.10 299 405 5.4E-44 T 14-10-2018 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 Gene3D G3DSA:3.40.50.300 1 298 1.3E-116 T 14-10-2018 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 6.2E-66 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 Pfam PF14492 Elongation Factor G, domain II 409 483 1.1E-35 T 14-10-2018 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 SUPERFAMILY SSF50447 271 409 1.92E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 SUPERFAMILY SSF52540 6 287 8.47E-107 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 SUPERFAMILY SSF54980 607 696 3.38E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 Pfam PF03144 Elongation factor Tu domain 2 329 396 9.3E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CF65_00564 7af468765eecb82a6fa1e95db8e9240e 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site CF65_01054 ca33f51dfa664abb26f963dd5db0fa59 61 Gene3D G3DSA:3.20.20.70 1 59 2.5E-15 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_01054 ca33f51dfa664abb26f963dd5db0fa59 61 Pfam PF01207 Dihydrouridine synthase (Dus) 1 53 1.8E-17 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CF65_01054 ca33f51dfa664abb26f963dd5db0fa59 61 SUPERFAMILY SSF51395 1 53 2.6E-13 T 14-10-2018 CF65_01054 ca33f51dfa664abb26f963dd5db0fa59 61 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 16 34 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CF65_00972 2c9dc7391072c336f14ba4b247fb2558 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_00972 2c9dc7391072c336f14ba4b247fb2558 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_00972 2c9dc7391072c336f14ba4b247fb2558 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_00972 2c9dc7391072c336f14ba4b247fb2558 90 Gene3D G3DSA:4.10.520.10 1 90 4.6E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CF65_00972 2c9dc7391072c336f14ba4b247fb2558 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CF65_00972 2c9dc7391072c336f14ba4b247fb2558 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.7E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_00972 2c9dc7391072c336f14ba4b247fb2558 90 SUPERFAMILY SSF47729 1 90 6.33E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CF65_00972 2c9dc7391072c336f14ba4b247fb2558 90 SMART SM00411 1 90 4.8E-45 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_01471 acdce8cb304b50e5443c8477506ca024 534 Gene3D G3DSA:3.40.50.150 167 474 1.4E-63 T 14-10-2018 CF65_01471 acdce8cb304b50e5443c8477506ca024 534 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 189 205 7.9E-21 T 14-10-2018 CF65_01471 acdce8cb304b50e5443c8477506ca024 534 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 339 363 7.9E-21 T 14-10-2018 CF65_01471 acdce8cb304b50e5443c8477506ca024 534 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 294 306 7.9E-21 T 14-10-2018 CF65_01471 acdce8cb304b50e5443c8477506ca024 534 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 219 233 7.9E-21 T 14-10-2018 CF65_01471 acdce8cb304b50e5443c8477506ca024 534 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 297 303 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CF65_01471 acdce8cb304b50e5443c8477506ca024 534 Pfam PF02384 N-6 DNA Methylase 167 485 2.8E-62 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CF65_01471 acdce8cb304b50e5443c8477506ca024 534 SUPERFAMILY SSF53335 9 530 9.14E-96 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02131 e63732ab0a563d657c62226b2ce51f87 278 Gene3D G3DSA:3.20.20.140 5 249 1.8E-82 T 14-10-2018 CF65_02131 e63732ab0a563d657c62226b2ce51f87 278 SUPERFAMILY SSF89550 2 260 2.88E-52 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CF65_02131 e63732ab0a563d657c62226b2ce51f87 278 SMART SM00481 4 69 1.3E-23 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CF65_02131 e63732ab0a563d657c62226b2ce51f87 278 Pfam PF02811 PHP domain 5 139 1.7E-11 T 14-10-2018 IPR004013 PHP domain GO:0003824 CF65_02131 e63732ab0a563d657c62226b2ce51f87 278 Gene3D G3DSA:1.10.150.650 97 168 1.8E-82 T 14-10-2018 CF65_01963 fef784d809d950bef2b55848a0865bbd 145 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 22 144 29.45 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CF65_01963 fef784d809d950bef2b55848a0865bbd 145 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 105 137 5.7E-11 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CF65_01963 fef784d809d950bef2b55848a0865bbd 145 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 26 134 1.4E-50 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CF65_01963 fef784d809d950bef2b55848a0865bbd 145 SUPERFAMILY SSF57716 105 143 2.71E-10 T 14-10-2018 CF65_01963 fef784d809d950bef2b55848a0865bbd 145 SUPERFAMILY SSF109635 4 103 8.5E-35 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily CF65_01963 fef784d809d950bef2b55848a0865bbd 145 PRINTS PR00618 DksA/TraR zinc finger signature 108 119 9.8E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CF65_01963 fef784d809d950bef2b55848a0865bbd 145 PRINTS PR00618 DksA/TraR zinc finger signature 120 132 9.8E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CF65_01963 fef784d809d950bef2b55848a0865bbd 145 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 108 132 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CF65_01963 fef784d809d950bef2b55848a0865bbd 145 Gene3D G3DSA:1.20.120.910 14 144 1.1E-34 T 14-10-2018 CF65_00563 ed86d752f2f529d9e683df614038a889 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.6E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00563 ed86d752f2f529d9e683df614038a889 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.5E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CF65_00563 ed86d752f2f529d9e683df614038a889 394 SUPERFAMILY SSF50447 203 301 3.93E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CF65_00563 ed86d752f2f529d9e683df614038a889 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00563 ed86d752f2f529d9e683df614038a889 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00563 ed86d752f2f529d9e683df614038a889 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00563 ed86d752f2f529d9e683df614038a889 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00563 ed86d752f2f529d9e683df614038a889 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00563 ed86d752f2f529d9e683df614038a889 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.7E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CF65_00563 ed86d752f2f529d9e683df614038a889 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 394 2.9E-239 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CF65_00563 ed86d752f2f529d9e683df614038a889 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 3.8E-34 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CF65_00563 ed86d752f2f529d9e683df614038a889 394 SUPERFAMILY SSF52540 6 219 2.43E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00563 ed86d752f2f529d9e683df614038a889 394 Gene3D G3DSA:2.40.30.10 206 334 7.7E-53 T 14-10-2018 CF65_00563 ed86d752f2f529d9e683df614038a889 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.056 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CF65_00563 ed86d752f2f529d9e683df614038a889 394 SUPERFAMILY SSF50465 298 393 1.55E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CF65_00563 ed86d752f2f529d9e683df614038a889 394 Gene3D G3DSA:2.40.30.10 338 393 2.5E-30 T 14-10-2018 CF65_00563 ed86d752f2f529d9e683df614038a889 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site CF65_00563 ed86d752f2f529d9e683df614038a889 394 Gene3D G3DSA:3.40.50.300 1 203 1.3E-70 T 14-10-2018 CF65_02012 64fbede10961f5159d3f6cf6b3bb1dff 356 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 47 194 5.0E-51 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CF65_02012 64fbede10961f5159d3f6cf6b3bb1dff 356 Pfam PF01641 SelR domain 218 338 8.6E-48 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CF65_02012 64fbede10961f5159d3f6cf6b3bb1dff 356 SUPERFAMILY SSF55068 28 199 1.83E-63 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CF65_02012 64fbede10961f5159d3f6cf6b3bb1dff 356 Gene3D G3DSA:3.30.1060.10 4 205 3.5E-62 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CF65_02012 64fbede10961f5159d3f6cf6b3bb1dff 356 SUPERFAMILY SSF51316 213 352 2.88E-58 T 14-10-2018 IPR011057 Mss4-like superfamily CF65_02012 64fbede10961f5159d3f6cf6b3bb1dff 356 Pfam PF01625 Peptide methionine sulfoxide reductase 47 195 1.2E-57 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CF65_02012 64fbede10961f5159d3f6cf6b3bb1dff 356 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 45 200 34.845 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CF65_02012 64fbede10961f5159d3f6cf6b3bb1dff 356 Gene3D G3DSA:2.170.150.20 206 355 1.1E-57 T 14-10-2018 CF65_02012 64fbede10961f5159d3f6cf6b3bb1dff 356 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 213 347 8.9E-65 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CF65_02012 64fbede10961f5159d3f6cf6b3bb1dff 356 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 207 339 34.973 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CF65_02301 9b9274a7112ce66841ebc5bdc080ee89 170 Pfam PF04345 Chorismate lyase 21 167 3.1E-36 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 CF65_02301 9b9274a7112ce66841ebc5bdc080ee89 170 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 14 169 21.341 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 CF65_02301 9b9274a7112ce66841ebc5bdc080ee89 170 SUPERFAMILY SSF64288 22 163 3.61E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CF65_02301 9b9274a7112ce66841ebc5bdc080ee89 170 Gene3D G3DSA:3.40.1410.10 10 168 2.0E-41 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CF65_00641 a61f00a3b69eb2ebd220f894aa9f9d48 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 220 21.041 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CF65_00641 a61f00a3b69eb2ebd220f894aa9f9d48 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 119 217 7.8E-21 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CF65_00641 a61f00a3b69eb2ebd220f894aa9f9d48 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 219 4.6E-34 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CF65_00641 a61f00a3b69eb2ebd220f894aa9f9d48 220 SUPERFAMILY SSF63848 116 219 8.37E-20 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 CF65_00641 a61f00a3b69eb2ebd220f894aa9f9d48 220 Gene3D G3DSA:2.160.20.70 101 220 3.3E-19 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 CF65_00641 a61f00a3b69eb2ebd220f894aa9f9d48 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.7E-27 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 CF65_00641 a61f00a3b69eb2ebd220f894aa9f9d48 220 Gene3D G3DSA:3.30.750.120 1 100 5.0E-15 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily CF65_01048 98f47d76cb1107bf8316ea20bcf99550 332 Pfam PF01547 Bacterial extracellular solute-binding protein 30 279 9.5E-27 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein CF65_01048 98f47d76cb1107bf8316ea20bcf99550 332 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 120 137 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 CF65_01048 98f47d76cb1107bf8316ea20bcf99550 332 Gene3D G3DSA:3.40.190.10 26 300 1.1E-103 T 14-10-2018 CF65_01048 98f47d76cb1107bf8316ea20bcf99550 332 PIRSF PIRSF002825 1 332 1.1E-93 T 14-10-2018 IPR026045 Ferric binding protein CF65_01048 98f47d76cb1107bf8316ea20bcf99550 332 SUPERFAMILY SSF53850 24 316 2.39E-67 T 14-10-2018 CF65_01048 98f47d76cb1107bf8316ea20bcf99550 332 Gene3D G3DSA:3.40.190.10 125 309 1.1E-103 T 14-10-2018 CF65_00841 9c74e581c4119de01c5d13c42573c3ff 488 Gene3D G3DSA:3.40.1390.10 3 100 1.6E-28 T 14-10-2018 CF65_00841 9c74e581c4119de01c5d13c42573c3ff 488 Gene3D G3DSA:3.90.190.20 340 488 2.5E-62 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CF65_00841 9c74e581c4119de01c5d13c42573c3ff 488 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 486 34.651 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CF65_00841 9c74e581c4119de01c5d13c42573c3ff 488 SUPERFAMILY SSF53244 334 487 2.9E-53 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CF65_00841 9c74e581c4119de01c5d13c42573c3ff 488 Gene3D G3DSA:3.40.1190.10 101 337 3.5E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CF65_00841 9c74e581c4119de01c5d13c42573c3ff 488 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 420 5.5E-25 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CF65_00841 9c74e581c4119de01c5d13c42573c3ff 488 Pfam PF08245 Mur ligase middle domain 110 313 3.4E-51 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CF65_00841 9c74e581c4119de01c5d13c42573c3ff 488 SUPERFAMILY SSF53623 101 333 6.41E-76 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CF65_00841 9c74e581c4119de01c5d13c42573c3ff 488 SUPERFAMILY SSF63418 11 99 1.2E-23 T 14-10-2018 IPR035911 MurE/MurF, N-terminal CF65_00841 9c74e581c4119de01c5d13c42573c3ff 488 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 16 486 1.3E-176 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CF65_00841 9c74e581c4119de01c5d13c42573c3ff 488 Pfam PF01225 Mur ligase family, catalytic domain 19 98 5.2E-13 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CF65_00747 03da80333e85ad5d6d52a872e1b8e4a5 347 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 2 346 7.3E-206 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CF65_00747 03da80333e85ad5d6d52a872e1b8e4a5 347 Gene3D G3DSA:3.30.428.10 177 347 1.0E-71 T 14-10-2018 IPR036265 HIT-like superfamily CF65_00747 03da80333e85ad5d6d52a872e1b8e4a5 347 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 152 169 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CF65_00747 03da80333e85ad5d6d52a872e1b8e4a5 347 Gene3D G3DSA:3.30.428.10 46 176 3.2E-56 T 14-10-2018 IPR036265 HIT-like superfamily CF65_00747 03da80333e85ad5d6d52a872e1b8e4a5 347 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 185 346 2.0E-72 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CF65_00747 03da80333e85ad5d6d52a872e1b8e4a5 347 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 177 9.5E-72 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CF65_00747 03da80333e85ad5d6d52a872e1b8e4a5 347 SUPERFAMILY SSF54197 4 178 9.72E-72 T 14-10-2018 IPR036265 HIT-like superfamily CF65_00747 03da80333e85ad5d6d52a872e1b8e4a5 347 PIRSF PIRSF000808 1 342 4.2E-127 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CF65_00747 03da80333e85ad5d6d52a872e1b8e4a5 347 SUPERFAMILY SSF54197 180 345 5.1E-57 T 14-10-2018 IPR036265 HIT-like superfamily CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 Gene3D G3DSA:3.40.50.720 161 446 3.7E-83 T 14-10-2018 CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 Gene3D G3DSA:3.40.50.10950 447 750 1.0E-88 T 14-10-2018 CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 SUPERFAMILY SSF53659 430 753 2.01E-83 T 14-10-2018 CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 Gene3D G3DSA:3.40.50.10380 1 160 3.4E-69 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 Pfam PF00390 Malic enzyme, N-terminal domain 19 114 7.9E-22 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 SUPERFAMILY SSF51735 163 453 3.71E-88 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 1.5E-20 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 SMART SM00919 163 401 5.5E-144 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 PIRSF PIRSF036684 1 754 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 SUPERFAMILY SSF53223 11 161 7.91E-53 T 14-10-2018 CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 Gene3D G3DSA:3.40.50.10750 573 726 1.0E-88 T 14-10-2018 CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 SMART SM01274 18 151 1.5E-81 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CF65_00066 b8c1af3cdaeb5a190370e72763b63dac 754 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 750 7.7E-96 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CF65_01755 c619fc8cc2d3664d78bac6253ec9fe67 217 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 196 5.7E-39 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 CF65_01755 c619fc8cc2d3664d78bac6253ec9fe67 217 Gene3D G3DSA:1.10.1760.20 1 196 3.5E-28 T 14-10-2018 CF65_01240 a392fdfa7e8b1ede61c49d4a0f852cd4 129 PIRSF PIRSF002131 1 129 3.4E-54 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CF65_01240 a392fdfa7e8b1ede61c49d4a0f852cd4 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.7E-56 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01240 a392fdfa7e8b1ede61c49d4a0f852cd4 129 Gene3D G3DSA:3.30.420.80 1 129 3.8E-58 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 CF65_01240 a392fdfa7e8b1ede61c49d4a0f852cd4 129 Pfam PF00411 Ribosomal protein S11 19 128 1.4E-53 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CF65_01240 a392fdfa7e8b1ede61c49d4a0f852cd4 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.889 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CF65_01240 a392fdfa7e8b1ede61c49d4a0f852cd4 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site CF65_01240 a392fdfa7e8b1ede61c49d4a0f852cd4 129 SUPERFAMILY SSF53137 14 129 6.98E-49 T 14-10-2018 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 1 275 5.5E-108 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 Gene3D G3DSA:3.40.190.10 81 180 4.2E-77 T 14-10-2018 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 209 225 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 190 8.5E-72 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 Gene3D G3DSA:3.40.190.10 1 187 4.2E-77 T 14-10-2018 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 1 275 34.845 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 SUPERFAMILY SSF54782 199 285 3.79E-27 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 204 273 5.4E-22 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 SUPERFAMILY SSF53850 1 197 2.27E-78 T 14-10-2018 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 Gene3D G3DSA:3.30.160.40 199 284 1.6E-29 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 PRINTS PR00151 Porphobilinogen deaminase signature 23 43 4.3E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 PRINTS PR00151 Porphobilinogen deaminase signature 102 119 4.3E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 PRINTS PR00151 Porphobilinogen deaminase signature 121 138 4.3E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 PRINTS PR00151 Porphobilinogen deaminase signature 54 73 4.3E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 PRINTS PR00151 Porphobilinogen deaminase signature 208 225 4.3E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00957 4414f42048bf86ea111d6fc78946a350 286 PIRSF PIRSF001438 1 286 1.0E-113 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00257 c713e05e2320ced25977cb9f69c976cd 373 Pfam PF01098 Cell cycle protein 18 366 1.3E-119 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00257 c713e05e2320ced25977cb9f69c976cd 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 323 347 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00257 c713e05e2320ced25977cb9f69c976cd 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 19 365 2.6E-131 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00257 c713e05e2320ced25977cb9f69c976cd 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 13 368 27.555 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00486 bb1fd85293450b137221cfaec3b6ac41 388 Pfam PF07670 Nucleoside recognition 66 162 1.1E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CF65_00486 bb1fd85293450b137221cfaec3b6ac41 388 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 168 380 1.5E-73 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CF65_00486 bb1fd85293450b137221cfaec3b6ac41 388 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 1 53 3.3E-14 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CF65_00486 bb1fd85293450b137221cfaec3b6ac41 388 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 380 3.5E-151 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CF65_00101 f4d7bc959346b14e71c7ad36c9aefc8b 183 Gene3D G3DSA:1.25.40.10 32 178 4.3E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00101 f4d7bc959346b14e71c7ad36c9aefc8b 183 SMART SM00028 37 70 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CF65_00101 f4d7bc959346b14e71c7ad36c9aefc8b 183 SMART SM00028 105 138 30.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CF65_00101 f4d7bc959346b14e71c7ad36c9aefc8b 183 SMART SM00028 71 104 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CF65_00101 f4d7bc959346b14e71c7ad36c9aefc8b 183 Pfam PF13181 Tetratricopeptide repeat 78 103 0.003 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CF65_00101 f4d7bc959346b14e71c7ad36c9aefc8b 183 SUPERFAMILY SSF48452 34 158 1.58E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00101 f4d7bc959346b14e71c7ad36c9aefc8b 183 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 14 178 1.4E-52 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW CF65_00558 c3a98d223acb51dd287a2077ce31cba1 341 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 341 86.963 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00558 c3a98d223acb51dd287a2077ce31cba1 341 Pfam PF01565 FAD binding domain 19 139 5.9E-21 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CF65_00558 c3a98d223acb51dd287a2077ce31cba1 341 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 4 329 4.7E-111 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00558 c3a98d223acb51dd287a2077ce31cba1 341 SUPERFAMILY SSF56194 203 338 8.37E-53 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00558 c3a98d223acb51dd287a2077ce31cba1 341 SUPERFAMILY SSF56176 4 196 4.69E-44 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CF65_00558 c3a98d223acb51dd287a2077ce31cba1 341 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 205 328 1.2E-35 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00558 c3a98d223acb51dd287a2077ce31cba1 341 Gene3D G3DSA:3.90.78.10 218 341 4.2E-49 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00558 c3a98d223acb51dd287a2077ce31cba1 341 Gene3D G3DSA:3.30.465.10 68 217 3.6E-54 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CF65_00558 c3a98d223acb51dd287a2077ce31cba1 341 Gene3D G3DSA:3.30.43.10 2 67 3.0E-19 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CF65_01332 3385f4f74ebad1c0dddd2329d9a8320c 282 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 7 191 1.2E-52 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 CF65_02077 369a775716fda564c57fe3434c8022b5 445 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 2 435 8.2E-66 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CF65_02077 369a775716fda564c57fe3434c8022b5 445 SUPERFAMILY SSF56954 2 439 3.79E-81 T 14-10-2018 CF65_02077 369a775716fda564c57fe3434c8022b5 445 Gene3D G3DSA:1.20.1600.10 37 439 1.1E-82 T 14-10-2018 CF65_02077 369a775716fda564c57fe3434c8022b5 445 Pfam PF02321 Outer membrane efflux protein 260 436 8.6E-29 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CF65_02077 369a775716fda564c57fe3434c8022b5 445 Pfam PF02321 Outer membrane efflux protein 47 231 2.8E-21 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CF65_02077 369a775716fda564c57fe3434c8022b5 445 Gene3D G3DSA:2.20.200.10 84 329 1.1E-82 T 14-10-2018 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 Pfam PF00384 Molybdopterin oxidoreductase 94 566 5.0E-83 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 827 0.0 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 SMART SM00926 37 91 2.7E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 Gene3D G3DSA:2.40.40.20 703 827 2.3E-47 T 14-10-2018 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 42 59 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 1.6E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 37 90 8.9E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 SUPERFAMILY SSF53706 33 658 1.19E-201 T 14-10-2018 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 Gene3D G3DSA:3.40.228.10 173 702 0.0 T 14-10-2018 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 22 3.9E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 Gene3D G3DSA:3.40.50.740 94 622 0.0 T 14-10-2018 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 Gene3D G3DSA:3.30.200.210 37 665 0.0 T 14-10-2018 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 827 31.524 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 Pfam PF01568 Molydopterin dinucleotide binding domain 713 821 1.0E-25 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CF65_00552 d7e3f849b36c467749c3f1e66c322535 828 SUPERFAMILY SSF50692 683 827 1.49E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CF65_02606 7319a4b525b86b40867febb92de2528b 549 SUPERFAMILY SSF52540 323 540 9.77E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02606 7319a4b525b86b40867febb92de2528b 549 Pfam PF00664 ABC transporter transmembrane region 2 254 1.1E-37 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CF65_02606 7319a4b525b86b40867febb92de2528b 549 SUPERFAMILY SSF90123 6 286 1.83E-46 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_02606 7319a4b525b86b40867febb92de2528b 549 SMART SM00382 338 529 6.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02606 7319a4b525b86b40867febb92de2528b 549 Gene3D G3DSA:1.20.1560.10 1 294 9.8E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_02606 7319a4b525b86b40867febb92de2528b 549 Pfam PF00005 ABC transporter 332 475 9.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02606 7319a4b525b86b40867febb92de2528b 549 Gene3D G3DSA:3.40.50.300 306 549 1.1E-70 T 14-10-2018 CF65_02606 7319a4b525b86b40867febb92de2528b 549 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 1 517 7.6E-177 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 CF65_02606 7319a4b525b86b40867febb92de2528b 549 ProSitePatterns PS00211 ABC transporters family signature. 447 461 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01386 b22ec29c6f0183a014a20e31026494dd 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 71 1.3E-37 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01386 b22ec29c6f0183a014a20e31026494dd 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.335 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01386 b22ec29c6f0183a014a20e31026494dd 76 SUPERFAMILY SSF46911 3 74 2.88E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01386 b22ec29c6f0183a014a20e31026494dd 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 4.0E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01386 b22ec29c6f0183a014a20e31026494dd 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01386 b22ec29c6f0183a014a20e31026494dd 76 Pfam PF01084 Ribosomal protein S18 19 68 1.8E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01386 b22ec29c6f0183a014a20e31026494dd 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 6.8E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01386 b22ec29c6f0183a014a20e31026494dd 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 6.8E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01386 b22ec29c6f0183a014a20e31026494dd 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 6.8E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01386 b22ec29c6f0183a014a20e31026494dd 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 6.8E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01386 b22ec29c6f0183a014a20e31026494dd 76 Gene3D G3DSA:4.10.640.10 20 75 3.1E-28 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02331 d80589c53a9d8424d85f6c8c77bf1f68 315 Pfam PF00005 ABC transporter 114 262 1.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02331 d80589c53a9d8424d85f6c8c77bf1f68 315 Gene3D G3DSA:3.40.50.300 91 312 1.3E-62 T 14-10-2018 CF65_02331 d80589c53a9d8424d85f6c8c77bf1f68 315 SUPERFAMILY SSF52540 89 304 1.78E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02331 d80589c53a9d8424d85f6c8c77bf1f68 315 Gene3D G3DSA:1.20.1560.10 1 81 1.0E-8 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_02331 d80589c53a9d8424d85f6c8c77bf1f68 315 SUPERFAMILY SSF90123 2 74 8.89E-9 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_02331 d80589c53a9d8424d85f6c8c77bf1f68 315 ProSitePatterns PS00211 ABC transporters family signature. 234 248 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02331 d80589c53a9d8424d85f6c8c77bf1f68 315 SMART SM00382 122 308 9.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02367 b02b9579bbd7c4206f72ecaa8278adcd 109 Pfam PF12836 Helix-hairpin-helix motif 46 107 2.0E-23 T 14-10-2018 CF65_02367 b02b9579bbd7c4206f72ecaa8278adcd 109 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 45 109 1.8E-32 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CF65_02367 b02b9579bbd7c4206f72ecaa8278adcd 109 SUPERFAMILY SSF47781 25 108 2.56E-27 T 14-10-2018 IPR010994 RuvA domain 2-like CF65_02367 b02b9579bbd7c4206f72ecaa8278adcd 109 Gene3D G3DSA:1.10.150.280 37 108 4.5E-20 T 14-10-2018 CF65_00301 a7fbe248e9a8ec989a0da87ccf01adbf 260 Pfam PF01026 TatD related DNase 4 256 1.1E-79 T 14-10-2018 IPR001130 TatD family GO:0016788 CF65_00301 a7fbe248e9a8ec989a0da87ccf01adbf 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CF65_00301 a7fbe248e9a8ec989a0da87ccf01adbf 260 SUPERFAMILY SSF51556 1 258 4.7E-89 T 14-10-2018 IPR032466 Metal-dependent hydrolase CF65_00301 a7fbe248e9a8ec989a0da87ccf01adbf 260 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 2.3E-98 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CF65_00301 a7fbe248e9a8ec989a0da87ccf01adbf 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 127 137 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CF65_00301 a7fbe248e9a8ec989a0da87ccf01adbf 260 PIRSF PIRSF005902 1 260 3.4E-81 T 14-10-2018 IPR001130 TatD family GO:0016788 CF65_00301 a7fbe248e9a8ec989a0da87ccf01adbf 260 Gene3D G3DSA:3.20.20.140 1 260 2.7E-100 T 14-10-2018 CF65_00301 a7fbe248e9a8ec989a0da87ccf01adbf 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 2.8E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 1.7E-20 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 SMART SM00478 38 185 1.0E-58 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.006 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 SUPERFAMILY SSF48150 2 208 2.2E-73 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 SMART SM00525 186 206 4.8E-6 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 PIRSF PIRSF001435 1 210 7.5E-54 T 14-10-2018 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 Gene3D G3DSA:1.10.340.30 21 132 4.4E-78 T 14-10-2018 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 Gene3D G3DSA:1.10.1670.10 11 203 4.4E-78 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 6.6E-90 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CF65_01814 d63de3524f19ce6d818e29b8625d1a30 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 4.2E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CF65_02236 cfa630e4c1d51f19d1d086f15878df37 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 195 1.9E-11 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal CF65_02236 cfa630e4c1d51f19d1d086f15878df37 213 SUPERFAMILY SSF47616 82 205 2.98E-24 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CF65_02236 cfa630e4c1d51f19d1d086f15878df37 213 Gene3D G3DSA:1.20.1050.10 89 194 6.0E-77 T 14-10-2018 CF65_02236 cfa630e4c1d51f19d1d086f15878df37 213 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.1E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CF65_02236 cfa630e4c1d51f19d1d086f15878df37 213 Gene3D G3DSA:3.40.30.10 11 201 6.0E-77 T 14-10-2018 CF65_02236 cfa630e4c1d51f19d1d086f15878df37 213 SUPERFAMILY SSF52833 11 111 6.58E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_00612 5587c13a96331b8d060177c49ffd5010 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CF65_00612 5587c13a96331b8d060177c49ffd5010 262 Gene3D G3DSA:1.20.1180.10 197 262 1.0E-23 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 CF65_00612 5587c13a96331b8d060177c49ffd5010 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 35 69 3.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_00612 5587c13a96331b8d060177c49ffd5010 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 3.1E-7 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_00612 5587c13a96331b8d060177c49ffd5010 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 34 3.6E-7 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_00612 5587c13a96331b8d060177c49ffd5010 262 PIRSF PIRSF000456 5 262 2.1E-106 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CF65_00612 5587c13a96331b8d060177c49ffd5010 262 SUPERFAMILY SSF51161 1 262 6.97E-81 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily CF65_00612 5587c13a96331b8d060177c49ffd5010 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 2.0E-106 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CF65_00612 5587c13a96331b8d060177c49ffd5010 262 Gene3D G3DSA:2.160.10.10 1 196 1.4E-57 T 14-10-2018 CF65_00612 5587c13a96331b8d060177c49ffd5010 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 3.2E-27 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 CF65_00612 5587c13a96331b8d060177c49ffd5010 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 47.191 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.8E-26 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 SMART SM01232 129 221 7.3E-50 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 Gene3D G3DSA:1.10.8.50 131 270 2.9E-49 T 14-10-2018 CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 4.0E-12 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 SMART SM00898 2 115 2.5E-44 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 5.2E-31 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 SUPERFAMILY SSF57716 217 269 1.06E-17 T 14-10-2018 CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 2.7E-102 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 SUPERFAMILY SSF81624 2 138 7.98E-39 T 14-10-2018 IPR035937 MutM-like, N-terminal CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 SUPERFAMILY SSF46946 130 222 1.31E-31 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 Gene3D G3DSA:3.20.190.10 2 128 9.8E-38 T 14-10-2018 IPR035937 MutM-like, N-terminal CF65_01325 5570b9fd2b5babb00e6600c04f654aae 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.481 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CF65_01569 a7ec48ef5b4a2668f8c8e77b6112c2dc 350 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 306 6.1E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CF65_01569 a7ec48ef5b4a2668f8c8e77b6112c2dc 350 SMART SM00382 32 236 3.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01569 a7ec48ef5b4a2668f8c8e77b6112c2dc 350 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 4.3E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CF65_01569 a7ec48ef5b4a2668f8c8e77b6112c2dc 350 Pfam PF00005 ABC transporter 23 188 3.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01569 a7ec48ef5b4a2668f8c8e77b6112c2dc 350 Gene3D G3DSA:3.40.50.300 1 340 4.9E-66 T 14-10-2018 CF65_01569 a7ec48ef5b4a2668f8c8e77b6112c2dc 350 SUPERFAMILY SSF52540 5 266 2.01E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 1 318 3.4E-124 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 340 34.616 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 Pfam PF00684 DnaJ central domain 116 176 2.1E-13 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 SUPERFAMILY SSF57938 103 180 7.06E-22 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 SUPERFAMILY SSF49493 87 225 8.89E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 Gene3D G3DSA:2.60.260.20 86 218 6.8E-37 T 14-10-2018 CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 SUPERFAMILY SSF49493 228 313 6.54E-22 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 Pfam PF00226 DnaJ domain 1 38 4.2E-14 T 14-10-2018 IPR001623 DnaJ domain CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 PRINTS PR00625 DnaJ domain signature 33 52 7.3E-14 T 14-10-2018 IPR001623 DnaJ domain CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 PRINTS PR00625 DnaJ domain signature 13 33 7.3E-14 T 14-10-2018 IPR001623 DnaJ domain CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 SUPERFAMILY SSF46565 1 77 1.18E-20 T 14-10-2018 IPR036869 Chaperone J-domain superfamily CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 Gene3D G3DSA:2.60.260.20 223 333 4.1E-29 T 14-10-2018 CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 Gene3D G3DSA:2.10.230.10 116 176 6.8E-37 T 14-10-2018 CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 Gene3D G3DSA:1.10.287.110 1 83 2.0E-22 T 14-10-2018 IPR036869 Chaperone J-domain superfamily CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 Pfam PF01556 DnaJ C terminal domain 90 302 2.0E-44 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal CF65_00659 dcb9e1a0769d4e905d45796704a83f31 346 ProSitePatterns PS00636 Nt-dnaJ domain signature. 18 37 - T 14-10-2018 IPR018253 DnaJ domain, conserved site CF65_02881 e78647b1ba309d39c4cd1e2bcd130a32 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.011 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02881 e78647b1ba309d39c4cd1e2bcd130a32 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 3.7E-44 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02881 e78647b1ba309d39c4cd1e2bcd130a32 85 SUPERFAMILY SSF110324 2 83 7.67E-34 T 14-10-2018 CF65_02881 e78647b1ba309d39c4cd1e2bcd130a32 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 5.6E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02881 e78647b1ba309d39c4cd1e2bcd130a32 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 5.6E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02881 e78647b1ba309d39c4cd1e2bcd130a32 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 5.6E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02881 e78647b1ba309d39c4cd1e2bcd130a32 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 6.0E-19 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02881 e78647b1ba309d39c4cd1e2bcd130a32 85 Pfam PF01016 Ribosomal L27 protein 2 82 2.0E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02881 e78647b1ba309d39c4cd1e2bcd130a32 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02881 e78647b1ba309d39c4cd1e2bcd130a32 85 Gene3D G3DSA:2.40.50.100 21 85 5.9E-31 T 14-10-2018 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.3E-46 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 Gene3D G3DSA:3.40.50.1370 5 330 1.8E-134 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 334 80.253 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 331 2.7E-52 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 Gene3D G3DSA:3.40.50.1370 151 320 1.8E-134 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 SUPERFAMILY SSF53671 4 332 1.17E-98 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.1E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 298 321 4.1E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 4.1E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 4.1E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 312 323 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 1.8E-137 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CF65_00381 2244a93b623243b4ee02ee8782051d86 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CF65_00055 680341e274fab75035161fda65f77af4 652 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 638 1.8E-128 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.2E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.2E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.2E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.2E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.2E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.2E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.2E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.2E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 6.3E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 6.3E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 6.3E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 6.3E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 6.3E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 6.3E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 6.3E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 8.4E-300 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00055 680341e274fab75035161fda65f77af4 652 Pfam PF01578 Cytochrome C assembly protein 89 297 4.0E-54 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CF65_01238 046f61f85e29d9cbaa67b49ebb064c65 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01238 046f61f85e29d9cbaa67b49ebb064c65 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.021 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01238 046f61f85e29d9cbaa67b49ebb064c65 37 SUPERFAMILY SSF57840 1 37 2.62E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01238 046f61f85e29d9cbaa67b49ebb064c65 37 Pfam PF00444 Ribosomal protein L36 1 37 8.2E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01238 046f61f85e29d9cbaa67b49ebb064c65 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.0E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01238 046f61f85e29d9cbaa67b49ebb064c65 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 1.0E-9 T 14-10-2018 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 SUPERFAMILY SSF56634 5 483 7.85E-209 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 340 348 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 Pfam PF06628 Catalase-related immune-responsive 422 483 3.4E-16 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 PIRSF PIRSF038928 6 484 3.1E-221 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 SMART SM01060 15 398 1.2E-286 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 PRINTS PR00067 Catalase signature 91 109 1.6E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 PRINTS PR00067 Catalase signature 327 353 1.6E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 PRINTS PR00067 Catalase signature 112 129 1.6E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 PRINTS PR00067 Catalase signature 28 51 1.6E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 PRINTS PR00067 Catalase signature 131 149 1.6E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 PRINTS PR00067 Catalase signature 295 322 1.6E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 Pfam PF00199 Catalase 15 395 4.2E-193 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 Gene3D G3DSA:2.40.180.10 8 484 3.5E-221 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CF65_00223 b0f953266f430b59d5f7b4e94d73b219 484 ProSitePatterns PS00438 Catalase proximal active site signature. 51 67 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CF65_02692 29c3103a32596675da49d9fd680b99e3 527 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 174 185 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02692 29c3103a32596675da49d9fd680b99e3 527 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 416 495 2.3E-11 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02692 29c3103a32596675da49d9fd680b99e3 527 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 254 420 2.7E-43 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02692 29c3103a32596675da49d9fd680b99e3 527 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 2 112 1.3E-20 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02692 29c3103a32596675da49d9fd680b99e3 527 SUPERFAMILY SSF56762 151 495 4.71E-112 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02692 29c3103a32596675da49d9fd680b99e3 527 SUPERFAMILY SSF143243 2 152 3.14E-33 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02692 29c3103a32596675da49d9fd680b99e3 527 Gene3D G3DSA:3.30.460.80 11 94 6.0E-8 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02692 29c3103a32596675da49d9fd680b99e3 527 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 47 92 1.0E-12 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02692 29c3103a32596675da49d9fd680b99e3 527 Gene3D G3DSA:1.10.645.20 139 495 4.1E-117 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02692 29c3103a32596675da49d9fd680b99e3 527 Pfam PF00374 Nickel-dependent hydrogenase 176 244 4.1E-14 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 PIRSF PIRSF000676 1 313 4.7E-80 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 Hamap MF_00384 Homoserine kinase [thrB]. 4 313 29.412 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 Gene3D G3DSA:3.30.230.10 4 172 6.9E-88 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 Pfam PF00288 GHMP kinases N terminal domain 88 155 5.1E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 SUPERFAMILY SSF54211 1 190 3.04E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 95 106 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 TIGRFAM TIGR00191 thrB: homoserine kinase 2 311 6.7E-118 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 SUPERFAMILY SSF55060 177 294 1.19E-33 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 Gene3D G3DSA:3.30.70.890 173 277 6.9E-88 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 PRINTS PR00958 Homoserine kinase signature 180 197 1.3E-34 T 14-10-2018 CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 PRINTS PR00958 Homoserine kinase signature 9 24 1.3E-34 T 14-10-2018 CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 PRINTS PR00958 Homoserine kinase signature 142 155 1.3E-34 T 14-10-2018 CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 PRINTS PR00958 Homoserine kinase signature 102 117 1.3E-34 T 14-10-2018 CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 PRINTS PR00958 Homoserine kinase signature 259 274 1.3E-34 T 14-10-2018 CF65_02358 60dc3f3d69125e6bcce016ba427bc85c 314 Pfam PF08544 GHMP kinases C terminal 227 292 1.2E-8 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain CF65_00112 8445790680e963960bcae93db21b17b6 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 330 350 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CF65_00112 8445790680e963960bcae93db21b17b6 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 14 406 9.9E-122 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CF65_00112 8445790680e963960bcae93db21b17b6 417 Pfam PF00860 Permease family 18 384 1.4E-105 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CF65_02196 9cf9320246bb2d1db5587a2d02c237e1 435 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 21 430 2.6E-156 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 CF65_02196 9cf9320246bb2d1db5587a2d02c237e1 435 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 20 426 1.5E-189 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 CF65_02196 9cf9320246bb2d1db5587a2d02c237e1 435 PIRSF PIRSF015658 1 432 1.4E-173 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 CF65_02628 7b6eb9393095b56e2c538585d756522c 267 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 197 213 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CF65_02628 7b6eb9393095b56e2c538585d756522c 267 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 1.9E-96 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CF65_02628 7b6eb9393095b56e2c538585d756522c 267 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.5E-104 T 14-10-2018 CF65_02628 7b6eb9393095b56e2c538585d756522c 267 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CF65_02628 7b6eb9393095b56e2c538585d756522c 267 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 2.1E-26 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase CF65_02628 7b6eb9393095b56e2c538585d756522c 267 SUPERFAMILY SSF56219 1 267 3.27E-86 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CF65_02628 7b6eb9393095b56e2c538585d756522c 267 Gene3D G3DSA:3.60.10.10 1 267 6.1E-82 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CF65_02242 7f8ef79be19b50c50af182db448cb4e6 337 SMART SM00729 23 230 2.3E-7 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CF65_02242 7f8ef79be19b50c50af182db448cb4e6 337 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 29 40 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_02242 7f8ef79be19b50c50af182db448cb4e6 337 Pfam PF13353 4Fe-4S single cluster domain 32 133 3.3E-6 T 14-10-2018 CF65_02242 7f8ef79be19b50c50af182db448cb4e6 337 Pfam PF06463 Molybdenum Cofactor Synthesis C 194 320 1.2E-37 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_02242 7f8ef79be19b50c50af182db448cb4e6 337 SUPERFAMILY SSF102114 14 309 3.53E-69 T 14-10-2018 CF65_02242 7f8ef79be19b50c50af182db448cb4e6 337 Gene3D G3DSA:3.20.20.70 11 337 4.1E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02242 7f8ef79be19b50c50af182db448cb4e6 337 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 14 337 37.157 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_02242 7f8ef79be19b50c50af182db448cb4e6 337 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 14 337 1.0E-100 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_02242 7f8ef79be19b50c50af182db448cb4e6 337 Pfam PF04055 Radical SAM superfamily 28 189 1.6E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CF65_02994 c6aa83c9386d200c03365f8c7337c16d 148 SUPERFAMILY SSF161111 2 50 8.37E-7 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CF65_02994 c6aa83c9386d200c03365f8c7337c16d 148 SUPERFAMILY SSF160240 65 133 4.19E-18 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CF65_02994 c6aa83c9386d200c03365f8c7337c16d 148 Gene3D G3DSA:1.20.1510.10 1 49 3.8E-5 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CF65_02994 c6aa83c9386d200c03365f8c7337c16d 148 Pfam PF16916 Dimerisation domain of Zinc Transporter 54 133 3.3E-20 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain CF65_02994 c6aa83c9386d200c03365f8c7337c16d 148 Gene3D G3DSA:3.30.70.1350 50 137 1.7E-26 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CF65_01650 be679952ba62afd76950e9f75f679abf 514 Gene3D G3DSA:1.20.58.370 2 95 2.7E-32 T 14-10-2018 IPR035277 MalF, N-terminal CF65_01650 be679952ba62afd76950e9f75f679abf 514 Gene3D G3DSA:1.10.3720.10 270 514 1.9E-71 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01650 be679952ba62afd76950e9f75f679abf 514 SUPERFAMILY SSF160964 14 260 7.06E-80 T 14-10-2018 CF65_01650 be679952ba62afd76950e9f75f679abf 514 SUPERFAMILY SSF161098 263 503 1.23E-57 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01650 be679952ba62afd76950e9f75f679abf 514 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 100 260 1.1E-58 T 14-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain CF65_01650 be679952ba62afd76950e9f75f679abf 514 Gene3D G3DSA:2.40.430.10 118 204 4.5E-44 T 14-10-2018 CF65_01650 be679952ba62afd76950e9f75f679abf 514 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 296 502 4.3E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01650 be679952ba62afd76950e9f75f679abf 514 Gene3D G3DSA:3.10.650.10 98 269 4.5E-44 T 14-10-2018 CF65_00453 08c6eeb2d61d80659b30d3536e6d3ad2 227 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 227 42.516 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CF65_00453 08c6eeb2d61d80659b30d3536e6d3ad2 227 SMART SM00855 2 188 3.8E-25 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_00453 08c6eeb2d61d80659b30d3536e6d3ad2 227 Gene3D G3DSA:3.40.50.1240 1 227 3.6E-82 T 14-10-2018 IPR029033 Histidine phosphatase superfamily CF65_00453 08c6eeb2d61d80659b30d3536e6d3ad2 227 SUPERFAMILY SSF53254 1 222 1.37E-72 T 14-10-2018 IPR029033 Histidine phosphatase superfamily CF65_00453 08c6eeb2d61d80659b30d3536e6d3ad2 227 PIRSF PIRSF000709 172 223 0.97 T 14-10-2018 CF65_00453 08c6eeb2d61d80659b30d3536e6d3ad2 227 PIRSF PIRSF000709 2 114 7.1E-6 T 14-10-2018 CF65_00453 08c6eeb2d61d80659b30d3536e6d3ad2 227 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 134 222 1.0E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_00453 08c6eeb2d61d80659b30d3536e6d3ad2 227 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 121 1.7E-26 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_00453 08c6eeb2d61d80659b30d3536e6d3ad2 227 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 1 227 2.3E-112 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CF65_02388 244a61977e3a6477f16abe8ed883fcbb 791 Pfam PF13802 Galactose mutarotase-like 147 212 4.0E-24 T 14-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain CF65_02388 244a61977e3a6477f16abe8ed883fcbb 791 SUPERFAMILY SSF51011 597 678 1.08E-20 T 14-10-2018 CF65_02388 244a61977e3a6477f16abe8ed883fcbb 791 SUPERFAMILY SSF51445 247 595 5.62E-71 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily CF65_02388 244a61977e3a6477f16abe8ed883fcbb 791 Gene3D G3DSA:2.60.40.1180 630 679 2.3E-13 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta CF65_02388 244a61977e3a6477f16abe8ed883fcbb 791 Pfam PF01055 Glycosyl hydrolases family 31 238 683 2.2E-121 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 CF65_02388 244a61977e3a6477f16abe8ed883fcbb 791 Gene3D G3DSA:3.20.20.80 244 627 5.6E-115 T 14-10-2018 CF65_02388 244a61977e3a6477f16abe8ed883fcbb 791 SUPERFAMILY SSF74650 2 244 1.13E-50 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CF65_02388 244a61977e3a6477f16abe8ed883fcbb 791 Pfam PF17137 Domain of unknown function (DUF5110) 708 766 3.3E-10 T 14-10-2018 IPR033403 Domain of unknown function DUF5110 CF65_02388 244a61977e3a6477f16abe8ed883fcbb 791 Gene3D G3DSA:2.60.40.1180 680 790 6.6E-11 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta CF65_02388 244a61977e3a6477f16abe8ed883fcbb 791 Pfam PF16338 Domain of unknown function (DUF4968) 14 107 3.3E-9 T 14-10-2018 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 CF65_02388 244a61977e3a6477f16abe8ed883fcbb 791 Gene3D G3DSA:2.60.40.1760 2 242 6.3E-43 T 14-10-2018 CF65_01114 c927cb58b9f5af2b175cb2122ba9c61c 374 Gene3D G3DSA:3.90.180.10 11 369 1.3E-145 T 14-10-2018 CF65_01114 c927cb58b9f5af2b175cb2122ba9c61c 374 Gene3D G3DSA:3.40.50.720 179 317 1.3E-145 T 14-10-2018 CF65_01114 c927cb58b9f5af2b175cb2122ba9c61c 374 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 7 374 1.0E-226 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CF65_01114 c927cb58b9f5af2b175cb2122ba9c61c 374 SUPERFAMILY SSF50129 323 374 3.92E-12 T 14-10-2018 IPR011032 GroES-like superfamily CF65_01114 c927cb58b9f5af2b175cb2122ba9c61c 374 SUPERFAMILY SSF51735 166 338 5.16E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01114 c927cb58b9f5af2b175cb2122ba9c61c 374 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CF65_01114 c927cb58b9f5af2b175cb2122ba9c61c 374 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 159 1.9E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CF65_01114 c927cb58b9f5af2b175cb2122ba9c61c 374 SMART SM00829 15 372 0.0034 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CF65_01114 c927cb58b9f5af2b175cb2122ba9c61c 374 Pfam PF00107 Zinc-binding dehydrogenase 202 334 1.2E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CF65_01114 c927cb58b9f5af2b175cb2122ba9c61c 374 SUPERFAMILY SSF50129 4 189 2.28E-68 T 14-10-2018 IPR011032 GroES-like superfamily CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 SUPERFAMILY SSF56712 16 629 8.37E-186 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 SMART SM00436 143 238 1.2E-36 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 Gene3D G3DSA:3.40.50.140 16 171 1.1E-59 T 14-10-2018 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 Pfam PF01751 Toprim domain 18 150 1.0E-13 T 14-10-2018 IPR006171 TOPRIM domain CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 Pfam PF01131 DNA topoisomerase 173 616 8.6E-111 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 340 355 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 SMART SM00493 16 139 9.1E-25 T 14-10-2018 IPR006171 TOPRIM domain CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 Gene3D G3DSA:1.10.460.10 177 623 5.4E-170 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 Hamap MF_00953 DNA topoisomerase 3 [topB]. 16 660 65.755 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 TIGRFAM TIGR01056 topB: DNA topoisomerase III 16 637 1.6E-252 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 Gene3D G3DSA:1.10.290.10 312 440 5.4E-170 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 Gene3D G3DSA:2.70.20.10 232 512 5.4E-170 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 SMART SM00437 303 582 1.1E-107 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 208 226 5.7E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 346 355 5.7E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 5.7E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 545 559 5.7E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CF65_00789 e90ab41c59ce31279e6ec69a9c82b0b4 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 426 442 5.7E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CF65_00081 03771f472cac745b37cd9cb2c0a515cd 243 Gene3D G3DSA:1.20.120.530 85 243 1.1E-35 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CF65_00081 03771f472cac745b37cd9cb2c0a515cd 243 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 7 241 3.8E-120 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CF65_00081 03771f472cac745b37cd9cb2c0a515cd 243 Pfam PF07840 FadR C-terminal domain 77 239 7.1E-62 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 CF65_00081 03771f472cac745b37cd9cb2c0a515cd 243 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 243 134.96 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CF65_00081 03771f472cac745b37cd9cb2c0a515cd 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 6.5E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CF65_00081 03771f472cac745b37cd9cb2c0a515cd 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 6.5E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CF65_00081 03771f472cac745b37cd9cb2c0a515cd 243 SUPERFAMILY SSF46785 11 80 2.23E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00081 03771f472cac745b37cd9cb2c0a515cd 243 SUPERFAMILY SSF48008 84 233 2.88E-55 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CF65_00081 03771f472cac745b37cd9cb2c0a515cd 243 SMART SM00345 17 76 4.8E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CF65_00081 03771f472cac745b37cd9cb2c0a515cd 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 76 2.6E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CF65_00081 03771f472cac745b37cd9cb2c0a515cd 243 Gene3D G3DSA:1.10.10.10 7 84 2.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00769 de5d3b582967092d29c5c86faf37eabc 558 Gene3D G3DSA:3.40.50.300 1 239 7.2E-39 T 14-10-2018 CF65_00769 de5d3b582967092d29c5c86faf37eabc 558 PIRSF PIRSF003128 1 557 1.3E-156 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CF65_00769 de5d3b582967092d29c5c86faf37eabc 558 Gene3D G3DSA:3.40.50.300 240 556 1.8E-47 T 14-10-2018 CF65_00769 de5d3b582967092d29c5c86faf37eabc 558 SUPERFAMILY SSF52540 3 509 3.72E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00769 de5d3b582967092d29c5c86faf37eabc 558 SUPERFAMILY SSF52540 1 220 9.3E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00769 de5d3b582967092d29c5c86faf37eabc 558 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 555 9.5E-195 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CF65_00769 de5d3b582967092d29c5c86faf37eabc 558 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 508 7.9E-20 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CF65_00099 189dd0742e010f4910f00d0ba2aee884 379 Gene3D G3DSA:3.20.20.70 74 344 2.2E-110 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_00099 189dd0742e010f4910f00d0ba2aee884 379 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 12 359 72.663 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 CF65_00099 189dd0742e010f4910f00d0ba2aee884 379 PIRSF PIRSF006004 7 372 2.4E-148 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 CF65_00099 189dd0742e010f4910f00d0ba2aee884 379 SUPERFAMILY SSF102114 111 331 3.53E-14 T 14-10-2018 CF65_00099 189dd0742e010f4910f00d0ba2aee884 379 Gene3D G3DSA:1.10.150.530 1 73 4.3E-28 T 14-10-2018 CF65_00099 189dd0742e010f4910f00d0ba2aee884 379 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 10 365 1.7E-171 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 CF65_00099 189dd0742e010f4910f00d0ba2aee884 379 Pfam PF04055 Radical SAM superfamily 115 285 1.0E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CF65_00309 7da0af5d6789d5a59764c7d4d58c7e37 301 PIRSF PIRSF000103 1 296 3.4E-58 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CF65_00309 7da0af5d6789d5a59764c7d4d58c7e37 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 165 3.7E-37 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CF65_00309 7da0af5d6789d5a59764c7d4d58c7e37 301 Gene3D G3DSA:3.40.50.720 1 169 6.4E-41 T 14-10-2018 CF65_00309 7da0af5d6789d5a59764c7d4d58c7e37 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 10 23 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CF65_00309 7da0af5d6789d5a59764c7d4d58c7e37 301 Gene3D G3DSA:1.10.1040.10 170 294 1.8E-38 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CF65_00309 7da0af5d6789d5a59764c7d4d58c7e37 301 SUPERFAMILY SSF48179 169 293 7.71E-36 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CF65_00309 7da0af5d6789d5a59764c7d4d58c7e37 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 290 1.2E-32 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CF65_00309 7da0af5d6789d5a59764c7d4d58c7e37 301 SUPERFAMILY SSF51735 6 168 8.78E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 7 613 0.0 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 6 614 45.66 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 Gene3D G3DSA:3.40.50.970 312 485 1.1E-67 T 14-10-2018 CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 Pfam PF02779 Transketolase, pyrimidine binding domain 315 475 1.1E-40 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 Pfam PF02780 Transketolase, C-terminal domain 490 605 1.3E-26 T 14-10-2018 IPR033248 Transketolase, C-terminal domain CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 SUPERFAMILY SSF52518 313 499 1.5E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 SMART SM00861 315 479 3.8E-71 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 SUPERFAMILY SSF52518 1 377 9.29E-78 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 SUPERFAMILY SSF52922 486 614 8.64E-30 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 ProSitePatterns PS00802 Transketolase signature 2. 421 437 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 ProSitePatterns PS00801 Transketolase signature 1. 32 51 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 7 279 8.7E-119 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CF65_02050 dfbb6af02025edc45c7706017cfba14b 616 Gene3D G3DSA:3.40.50.920 490 614 6.5E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CF65_00150 9d62676ddc2cdffd50425799c889b889 300 SUPERFAMILY SSF48452 48 295 6.83E-60 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00150 9d62676ddc2cdffd50425799c889b889 300 SMART SM00028 73 106 0.0078 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CF65_00150 9d62676ddc2cdffd50425799c889b889 300 SMART SM00028 107 140 7.1E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CF65_00150 9d62676ddc2cdffd50425799c889b889 300 SMART SM00028 246 279 44.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CF65_00150 9d62676ddc2cdffd50425799c889b889 300 PIRSF PIRSF004654 1 300 6.4E-114 T 14-10-2018 IPR023605 Lipoprotein NlpI CF65_00150 9d62676ddc2cdffd50425799c889b889 300 Gene3D G3DSA:1.25.40.10 33 300 4.9E-73 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00150 9d62676ddc2cdffd50425799c889b889 300 Pfam PF07719 Tetratricopeptide repeat 109 140 2.1E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 CF65_01317 2f9d87be34fde24c141343cda4141940 65 SUPERFAMILY SSF47781 12 64 6.23E-5 T 14-10-2018 IPR010994 RuvA domain 2-like CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 Gene3D G3DSA:2.30.30.30 11 78 8.4E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 Pfam PF01132 Elongation factor P (EF-P) OB domain 85 136 1.1E-19 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 Gene3D G3DSA:2.40.50.140 143 201 4.4E-28 T 14-10-2018 CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 SUPERFAMILY SSF50249 143 200 1.71E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 SUPERFAMILY SSF50249 83 141 6.43E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 ProSitePatterns PS01275 Elongation factor P signature. 165 184 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 Hamap MF_00141 Elongation factor P [efp]. 16 200 47.629 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 SUPERFAMILY SSF50104 13 76 3.66E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 TIGRFAM TIGR00038 efp: translation elongation factor P 17 200 2.8E-74 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 SMART SM01185 82 136 7.7E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 Gene3D G3DSA:2.40.50.140 79 142 3.1E-26 T 14-10-2018 CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 SMART SM00841 144 199 7.8E-33 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 PIRSF PIRSF005901 15 201 1.6E-61 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 Pfam PF09285 Elongation factor P, C-terminal 144 199 8.6E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CF65_02967 3e9f4bfa47fc9e5af216f894093d6403 201 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 18 75 4.0E-23 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like CF65_02382 578f7a0c2bfd60153044eb9597020df4 467 SUPERFAMILY SSF51556 2 467 5.44E-184 T 14-10-2018 IPR032466 Metal-dependent hydrolase CF65_02382 578f7a0c2bfd60153044eb9597020df4 467 Gene3D G3DSA:3.20.20.140 7 466 1.6E-204 T 14-10-2018 CF65_02382 578f7a0c2bfd60153044eb9597020df4 467 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 49.548 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CF65_02382 578f7a0c2bfd60153044eb9597020df4 467 Gene3D G3DSA:1.10.2020.10 46 137 1.6E-204 T 14-10-2018 CF65_02382 578f7a0c2bfd60153044eb9597020df4 467 Pfam PF02614 Glucuronate isomerase 1 466 9.8E-228 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 171 178 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 Gene3D G3DSA:1.10.287.990 20 93 7.8E-27 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 Gene3D G3DSA:2.40.500.20 97 213 1.7E-49 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 93 4.1E-29 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 PIRSF PIRSF000349 1 212 2.9E-79 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 100 204 5.8E-40 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 SUPERFAMILY SSF54719 98 208 1.7E-46 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 8.6E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 PRINTS PR01703 Manganese superoxide dismutase signature 127 135 8.6E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 8.6E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 PRINTS PR01703 Manganese superoxide dismutase signature 76 89 8.6E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 PRINTS PR01703 Manganese superoxide dismutase signature 169 181 8.6E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_00068 61208aa8228b4b19db2b7006c4e7d704 214 SUPERFAMILY SSF46609 1 93 7.2E-32 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 33 43 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 Hamap MF_01201 Alanine racemase. 3 359 34.955 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 SMART SM01005 235 359 2.6E-61 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 TIGRFAM TIGR00492 alr: alanine racemase 5 360 1.7E-143 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 Gene3D G3DSA:2.40.37.10 11 354 6.5E-128 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 SUPERFAMILY SSF51419 12 236 4.36E-67 T 14-10-2018 IPR029066 PLP-binding barrel CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 PRINTS PR00992 Alanine racemase signature 341 354 3.6E-73 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 PRINTS PR00992 Alanine racemase signature 28 44 3.6E-73 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 PRINTS PR00992 Alanine racemase signature 123 135 3.6E-73 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 PRINTS PR00992 Alanine racemase signature 158 169 3.6E-73 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 PRINTS PR00992 Alanine racemase signature 251 266 3.6E-73 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 PRINTS PR00992 Alanine racemase signature 289 306 3.6E-73 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 PRINTS PR00992 Alanine racemase signature 195 222 3.6E-73 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 PRINTS PR00992 Alanine racemase signature 63 81 3.6E-73 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 PRINTS PR00992 Alanine racemase signature 268 283 3.6E-73 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 Gene3D G3DSA:3.20.20.10 12 220 6.5E-128 T 14-10-2018 IPR029066 PLP-binding barrel CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 SUPERFAMILY SSF50621 230 359 1.4E-44 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 Pfam PF01168 Alanine racemase, N-terminal domain 10 222 7.5E-71 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_01623 de4818166395a4b6552f3e5c22c3e6dc 360 Pfam PF00842 Alanine racemase, C-terminal domain 235 356 7.0E-40 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_02166 69f9815ade28e913f8b5db066e092c20 329 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 89 2.0E-24 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CF65_02166 69f9815ade28e913f8b5db066e092c20 329 Pfam PF01409 tRNA synthetases class II core domain (F) 94 328 3.4E-104 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CF65_02166 69f9815ade28e913f8b5db066e092c20 329 SUPERFAMILY SSF55681 94 329 7.96E-82 T 14-10-2018 CF65_02166 69f9815ade28e913f8b5db066e092c20 329 SUPERFAMILY SSF46589 19 101 2.09E-19 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CF65_02166 69f9815ade28e913f8b5db066e092c20 329 Gene3D G3DSA:3.30.930.10 7 329 3.2E-121 T 14-10-2018 CF65_02166 69f9815ade28e913f8b5db066e092c20 329 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 328 47.714 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CF65_02166 69f9815ade28e913f8b5db066e092c20 329 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 329 2.1E-115 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CF65_00368 5f26145a3a259bf75f2bc0046d7c96e9 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 1.3E-75 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00368 5f26145a3a259bf75f2bc0046d7c96e9 200 SUPERFAMILY SSF52166 9 199 2.62E-73 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 CF65_00368 5f26145a3a259bf75f2bc0046d7c96e9 200 Gene3D G3DSA:3.40.1370.10 7 200 2.2E-69 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 CF65_00368 5f26145a3a259bf75f2bc0046d7c96e9 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.4E-64 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CF65_00368 5f26145a3a259bf75f2bc0046d7c96e9 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 1 200 33.909 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00254 1577c5368c14b4bf0d66bd94fc7df2b0 372 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 261 352 8.7E-25 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_00254 1577c5368c14b4bf0d66bd94fc7df2b0 372 SMART SM00936 261 352 3.5E-31 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_00254 1577c5368c14b4bf0d66bd94fc7df2b0 372 Gene3D G3DSA:2.60.410.10 261 352 2.4E-25 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_00254 1577c5368c14b4bf0d66bd94fc7df2b0 372 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 126 139 1.2E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CF65_00254 1577c5368c14b4bf0d66bd94fc7df2b0 372 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 99 116 1.2E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CF65_00254 1577c5368c14b4bf0d66bd94fc7df2b0 372 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 43 54 1.2E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CF65_00254 1577c5368c14b4bf0d66bd94fc7df2b0 372 SUPERFAMILY SSF69189 261 354 1.14E-24 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_00254 1577c5368c14b4bf0d66bd94fc7df2b0 372 SUPERFAMILY SSF56601 9 261 1.65E-71 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CF65_00254 1577c5368c14b4bf0d66bd94fc7df2b0 372 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 12 241 3.7E-98 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CF65_00254 1577c5368c14b4bf0d66bd94fc7df2b0 372 Gene3D G3DSA:3.40.710.10 1 260 2.9E-85 T 14-10-2018 CF65_02472 e860edf4b08eb6a83ce8b7db887fb6e2 233 SUPERFAMILY SSF51366 17 228 3.58E-57 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CF65_02472 e860edf4b08eb6a83ce8b7db887fb6e2 233 Gene3D G3DSA:3.20.20.70 3 233 2.8E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02472 e860edf4b08eb6a83ce8b7db887fb6e2 233 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 39 230 3.8E-94 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CF65_02472 e860edf4b08eb6a83ce8b7db887fb6e2 233 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 15 229 38.907 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CF65_01746 2d29d096bc4ee66756464776f55eb52f 227 Gene3D G3DSA:3.40.30.10 69 226 2.8E-46 T 14-10-2018 CF65_01746 2d29d096bc4ee66756464776f55eb52f 227 SUPERFAMILY SSF54423 20 77 8.5E-16 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CF65_01746 2d29d096bc4ee66756464776f55eb52f 227 SUPERFAMILY SSF52833 83 226 1.74E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_01746 2d29d096bc4ee66756464776f55eb52f 227 Pfam PF13098 Thioredoxin-like domain 102 225 8.9E-24 T 14-10-2018 IPR012336 Thioredoxin-like fold CF65_01746 2d29d096bc4ee66756464776f55eb52f 227 Gene3D G3DSA:3.10.450.70 20 68 1.5E-19 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CF65_01746 2d29d096bc4ee66756464776f55eb52f 227 Pfam PF10411 Disulfide bond isomerase protein N-terminus 25 76 9.1E-16 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CF65_02519 b744091734d4201e96fdbd556fafcad6 887 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 867 0.0 T 14-10-2018 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 868 24.432 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 Gene3D G3DSA:1.10.268.10 369 492 5.3E-230 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 SUPERFAMILY SSF101904 532 877 3.01E-107 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CF65_02519 b744091734d4201e96fdbd556fafcad6 887 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 770 816 4.7E-16 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 687 8.8E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 743 2.9E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 584 2.2E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 820 866 3.3E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 3.6E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 Gene3D G3DSA:3.90.199.10 33 520 5.3E-230 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 SMART SM00434 11 498 8.0E-291 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 Gene3D G3DSA:3.30.1360.40 236 332 5.3E-230 T 14-10-2018 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 Gene3D G3DSA:2.120.10.90 534 868 4.2E-120 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CF65_02519 b744091734d4201e96fdbd556fafcad6 887 SUPERFAMILY SSF56719 30 520 3.27E-181 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CF65_02519 b744091734d4201e96fdbd556fafcad6 887 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.0E-149 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_02338 d98a9694ab88932b1b867934579176d5 241 Pfam PF03741 Integral membrane protein TerC family 15 205 3.5E-51 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CF65_02412 e7df6cd3f4fd0a618dc5a88884ea4610 315 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 310 7.8E-142 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CF65_02412 e7df6cd3f4fd0a618dc5a88884ea4610 315 SUPERFAMILY SSF53686 3 308 3.01E-91 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_02412 e7df6cd3f4fd0a618dc5a88884ea4610 315 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 310 5.6E-133 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CF65_02412 e7df6cd3f4fd0a618dc5a88884ea4610 315 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 298 1.1E-64 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CF65_02412 e7df6cd3f4fd0a618dc5a88884ea4610 315 Gene3D G3DSA:3.40.50.1100 11 305 3.8E-122 T 14-10-2018 CF65_02412 e7df6cd3f4fd0a618dc5a88884ea4610 315 Gene3D G3DSA:3.40.50.1100 42 144 3.8E-122 T 14-10-2018 CF65_02412 e7df6cd3f4fd0a618dc5a88884ea4610 315 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 SMART SM00963 1 86 8.9E-36 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.694 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 Gene3D G3DSA:3.40.50.300 90 285 1.6E-122 T 14-10-2018 CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 Pfam PF02978 Signal peptide binding domain 329 427 6.2E-33 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 SUPERFAMILY SSF52540 42 352 4.5E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.6E-21 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 SUPERFAMILY SSF47446 298 430 7.33E-46 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 Gene3D G3DSA:1.20.120.140 4 305 1.6E-122 T 14-10-2018 CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 Gene3D G3DSA:1.10.260.30 328 451 1.1E-44 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 SMART SM00962 100 296 1.5E-117 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.8E-179 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 SMART SM00382 99 276 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01117 9cf885935d8c9bd0c69a73b048d732be 459 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.6E-74 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CF65_02484 1ba29305cc925dae4a9659ab70f3d702 588 ProSitePatterns PS00211 ABC transporters family signature. 196 210 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02484 1ba29305cc925dae4a9659ab70f3d702 588 Gene3D G3DSA:3.40.50.300 34 318 9.9E-91 T 14-10-2018 CF65_02484 1ba29305cc925dae4a9659ab70f3d702 588 SUPERFAMILY SSF52540 337 564 3.14E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02484 1ba29305cc925dae4a9659ab70f3d702 588 SMART SM00382 381 551 1.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02484 1ba29305cc925dae4a9659ab70f3d702 588 SMART SM00382 64 269 1.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02484 1ba29305cc925dae4a9659ab70f3d702 588 Gene3D G3DSA:3.40.50.300 319 588 1.8E-76 T 14-10-2018 CF65_02484 1ba29305cc925dae4a9659ab70f3d702 588 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 36 586 8.6E-295 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 CF65_02484 1ba29305cc925dae4a9659ab70f3d702 588 SUPERFAMILY SSF52540 44 276 7.02E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02484 1ba29305cc925dae4a9659ab70f3d702 588 Pfam PF12848 ABC transporter 263 336 3.1E-13 T 14-10-2018 IPR032781 ABC-transporter extension domain CF65_02484 1ba29305cc925dae4a9659ab70f3d702 588 Pfam PF00005 ABC transporter 55 224 2.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02484 1ba29305cc925dae4a9659ab70f3d702 588 Pfam PF00005 ABC transporter 373 506 5.9E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02319 10774b046bccfd2d1a80fc87a504cb37 173 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 147 1.3E-50 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 CF65_02319 10774b046bccfd2d1a80fc87a504cb37 173 SUPERFAMILY SSF55804 1 148 8.63E-33 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CF65_02319 10774b046bccfd2d1a80fc87a504cb37 173 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 148 3.5E-32 T 14-10-2018 IPR002178 PTS EIIA type-2 domain CF65_02319 10774b046bccfd2d1a80fc87a504cb37 173 Gene3D G3DSA:3.40.930.10 1 154 2.6E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CF65_01813 193d0c64cfdb45757eecf7108de6a051 261 Pfam PF02508 Rnf-Nqr subunit, membrane protein 57 250 1.4E-65 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CF65_01813 193d0c64cfdb45757eecf7108de6a051 261 PIRSF PIRSF006102 51 261 2.5E-77 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CF65_01813 193d0c64cfdb45757eecf7108de6a051 261 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 57 259 4.1E-86 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 CF65_01813 193d0c64cfdb45757eecf7108de6a051 261 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 45 261 27.855 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 CF65_01292 a4e8ce98c6f9e547f1c6d295d9d9928a 159 Pfam PF00436 Single-strand binding protein family 4 108 6.6E-42 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CF65_01292 a4e8ce98c6f9e547f1c6d295d9d9928a 159 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 38.277 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CF65_01292 a4e8ce98c6f9e547f1c6d295d9d9928a 159 PIRSF PIRSF002070 1 154 2.6E-39 T 14-10-2018 CF65_01292 a4e8ce98c6f9e547f1c6d295d9d9928a 159 Gene3D G3DSA:2.40.50.140 1 123 5.0E-47 T 14-10-2018 CF65_01292 a4e8ce98c6f9e547f1c6d295d9d9928a 159 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 159 2.8E-61 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CF65_01292 a4e8ce98c6f9e547f1c6d295d9d9928a 159 SUPERFAMILY SSF50249 3 159 3.77E-60 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01986 3810f77f3f7db64aae600f7423527440 556 SUPERFAMILY SSF52777 314 556 6.67E-80 T 14-10-2018 CF65_01986 3810f77f3f7db64aae600f7423527440 556 Pfam PF02817 e3 binding domain 251 285 1.3E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 CF65_01986 3810f77f3f7db64aae600f7423527440 556 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 44 73 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CF65_01986 3810f77f3f7db64aae600f7423527440 556 Gene3D G3DSA:3.30.559.10 310 556 1.1E-97 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CF65_01986 3810f77f3f7db64aae600f7423527440 556 SUPERFAMILY SSF51230 20 113 1.09E-22 T 14-10-2018 IPR011053 Single hybrid motif CF65_01986 3810f77f3f7db64aae600f7423527440 556 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 100 556 2.1E-210 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 CF65_01986 3810f77f3f7db64aae600f7423527440 556 SUPERFAMILY SSF47005 246 289 9.16E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CF65_01986 3810f77f3f7db64aae600f7423527440 556 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 325 555 1.2E-78 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 CF65_01986 3810f77f3f7db64aae600f7423527440 556 Gene3D G3DSA:2.40.50.100 120 197 3.4E-20 T 14-10-2018 CF65_01986 3810f77f3f7db64aae600f7423527440 556 Gene3D G3DSA:2.40.50.100 20 98 3.1E-22 T 14-10-2018 CF65_01986 3810f77f3f7db64aae600f7423527440 556 Gene3D G3DSA:4.10.320.10 250 294 7.7E-21 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CF65_01986 3810f77f3f7db64aae600f7423527440 556 Pfam PF00364 Biotin-requiring enzyme 122 191 2.5E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment CF65_01986 3810f77f3f7db64aae600f7423527440 556 Pfam PF00364 Biotin-requiring enzyme 22 93 4.9E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment CF65_01986 3810f77f3f7db64aae600f7423527440 556 SUPERFAMILY SSF51230 120 212 2.49E-22 T 14-10-2018 IPR011053 Single hybrid motif CF65_01986 3810f77f3f7db64aae600f7423527440 556 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 143 172 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CF65_01396 f40ce3bc761f3be604f17e30b3a22c45 347 Gene3D G3DSA:3.40.50.2000 162 346 2.5E-36 T 14-10-2018 CF65_01396 f40ce3bc761f3be604f17e30b3a22c45 347 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 315 8.0E-62 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 CF65_01396 f40ce3bc761f3be604f17e30b3a22c45 347 SUPERFAMILY SSF53756 9 344 4.55E-84 T 14-10-2018 CF65_01396 f40ce3bc761f3be604f17e30b3a22c45 347 Gene3D G3DSA:3.40.50.2000 4 156 2.8E-25 T 14-10-2018 CF65_02937 90993c6edd3d0f9d20e08306fd0881d0 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 29.922 T 14-10-2018 IPR007551 Protein of unknown function DUF520 CF65_02937 90993c6edd3d0f9d20e08306fd0881d0 163 Gene3D G3DSA:3.30.70.990 9 96 9.5E-34 T 14-10-2018 IPR035570 UPF0234, N-terminal CF65_02937 90993c6edd3d0f9d20e08306fd0881d0 163 Gene3D G3DSA:3.30.70.860 97 163 7.1E-33 T 14-10-2018 IPR035571 UPF0234-like, C-terminal CF65_02937 90993c6edd3d0f9d20e08306fd0881d0 163 SUPERFAMILY SSF89963 2 89 1.02E-29 T 14-10-2018 IPR036183 YajQ-like superfamily CF65_02937 90993c6edd3d0f9d20e08306fd0881d0 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 7.5E-66 T 14-10-2018 IPR007551 Protein of unknown function DUF520 CF65_02937 90993c6edd3d0f9d20e08306fd0881d0 163 SUPERFAMILY SSF89963 91 163 1.96E-30 T 14-10-2018 IPR036183 YajQ-like superfamily CF65_02294 1f2854f15924bfe9395dd146e40d9097 510 Pfam PF03553 Na+/H+ antiporter family 165 485 6.1E-87 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CF65_01685 967fabdc9046e58d962a151d8875325e 286 Gene3D G3DSA:3.90.1170.20 12 119 3.3E-63 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 CF65_01685 967fabdc9046e58d962a151d8875325e 286 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 106 276 4.7E-44 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 CF65_01685 967fabdc9046e58d962a151d8875325e 286 TIGRFAM TIGR01334 modD: modD protein 2 278 7.5E-131 T 14-10-2018 IPR006242 Putative pyrophosphorylase ModD GO:0016763 CF65_01685 967fabdc9046e58d962a151d8875325e 286 SUPERFAMILY SSF51690 106 276 2.43E-37 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CF65_01685 967fabdc9046e58d962a151d8875325e 286 Gene3D G3DSA:3.20.20.70 122 260 3.3E-63 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_01685 967fabdc9046e58d962a151d8875325e 286 PIRSF PIRSF006250 1 281 2.0E-92 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CF65_01685 967fabdc9046e58d962a151d8875325e 286 SUPERFAMILY SSF54675 2 105 1.22E-20 T 14-10-2018 CF65_01685 967fabdc9046e58d962a151d8875325e 286 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 103 9.2E-19 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 SUPERFAMILY SSF101967 1651 1742 2.75E-6 T 14-10-2018 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1847 1887 6.7E-12 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 605 648 3.3E-11 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1715 1755 3.7E-11 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 414 450 1.1E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 725 747 1.2E-6 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1013 1052 3.9E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1621 1659 2.7E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 SUPERFAMILY SSF101967 300 437 3.53E-26 T 14-10-2018 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 SUPERFAMILY SSF101967 500 630 6.41E-19 T 14-10-2018 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Gene3D G3DSA:1.20.5.170 611 634 2.5E-9 T 14-10-2018 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Gene3D G3DSA:1.20.5.170 1722 1747 2.6E-10 T 14-10-2018 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Gene3D G3DSA:2.150.10.10 635 747 8.5E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 1.9E-8 T 14-10-2018 IPR024973 ESPR domain CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Gene3D G3DSA:2.150.10.10 103 235 3.7E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF05658 Head domain of trimeric autotransporter adhesin 249 274 5.8E-6 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF05658 Head domain of trimeric autotransporter adhesin 326 352 7.4E-6 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF05658 Head domain of trimeric autotransporter adhesin 172 195 1.0E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF05658 Head domain of trimeric autotransporter adhesin 504 532 7.7E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF05658 Head domain of trimeric autotransporter adhesin 199 223 2.0E-4 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 SUPERFAMILY SSF101967 648 747 2.22E-6 T 14-10-2018 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 SUPERFAMILY SSF54523 1858 1965 1.73E-23 T 14-10-2018 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 SUPERFAMILY SSF101967 1796 1869 1.31E-10 T 14-10-2018 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 SUPERFAMILY SSF101967 130 277 1.57E-14 T 14-10-2018 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Pfam PF03895 YadA-like membrane anchor domain 1905 1965 6.6E-18 T 14-10-2018 IPR005594 YadA-like, C-terminal CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Gene3D G3DSA:3.30.390.90 979 1018 3.5E-13 T 14-10-2018 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Gene3D G3DSA:3.30.390.90 1814 1852 1.5E-14 T 14-10-2018 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Gene3D G3DSA:3.30.390.90 1682 1719 4.5E-13 T 14-10-2018 CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Gene3D G3DSA:2.150.10.10 445 610 5.0E-21 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Gene3D G3DSA:2.150.10.10 280 444 2.0E-32 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CF65_00234 6f78936168eafb8adc92c8eb3076e389 1965 Gene3D G3DSA:3.30.1300.30 1867 1965 5.8E-29 T 14-10-2018 CF65_02830 5bb43b0798281d6b393874b107d640e3 426 SUPERFAMILY SSF69304 161 422 5.62E-49 T 14-10-2018 CF65_02830 5bb43b0798281d6b393874b107d640e3 426 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 18 421 3.1E-149 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 CF65_02830 5bb43b0798281d6b393874b107d640e3 426 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 6 420 45.512 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 CF65_02830 5bb43b0798281d6b393874b107d640e3 426 Pfam PF07676 WD40-like Beta Propeller Repeat 199 222 1.1E-5 T 14-10-2018 IPR011659 WD40-like Beta Propeller CF65_02830 5bb43b0798281d6b393874b107d640e3 426 Pfam PF07676 WD40-like Beta Propeller Repeat 364 393 1.0E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller CF65_02830 5bb43b0798281d6b393874b107d640e3 426 Pfam PF07676 WD40-like Beta Propeller Repeat 241 273 1.5E-11 T 14-10-2018 IPR011659 WD40-like Beta Propeller CF65_02830 5bb43b0798281d6b393874b107d640e3 426 Pfam PF07676 WD40-like Beta Propeller Repeat 283 317 3.7E-15 T 14-10-2018 IPR011659 WD40-like Beta Propeller CF65_02830 5bb43b0798281d6b393874b107d640e3 426 Gene3D G3DSA:3.40.50.10070 21 165 2.5E-48 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 CF65_02830 5bb43b0798281d6b393874b107d640e3 426 SUPERFAMILY SSF52964 32 162 8.76E-37 T 14-10-2018 CF65_02830 5bb43b0798281d6b393874b107d640e3 426 Gene3D G3DSA:2.120.10.30 166 426 5.5E-93 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CF65_02830 5bb43b0798281d6b393874b107d640e3 426 Pfam PF04052 TolB amino-terminal domain 25 123 1.2E-31 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CF65_00988 1ea2308c3c4a4e07b5aa64a29bbcdf54 429 SUPERFAMILY SSF52540 20 311 2.48E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00988 1ea2308c3c4a4e07b5aa64a29bbcdf54 429 Gene3D G3DSA:3.40.50.300 131 314 1.4E-22 T 14-10-2018 CF65_00988 1ea2308c3c4a4e07b5aa64a29bbcdf54 429 Pfam PF05872 Bacterial protein of unknown function (DUF853) 2 427 9.1E-203 T 14-10-2018 IPR033186 Helicase HerA-like C-terminal CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.6E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 SUPERFAMILY SSF50447 203 301 3.93E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 1.0E-239 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.7E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 3.8E-34 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 SUPERFAMILY SSF52540 6 219 2.43E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 Gene3D G3DSA:2.40.30.10 206 334 7.7E-53 T 14-10-2018 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 SUPERFAMILY SSF50465 298 393 1.55E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 Gene3D G3DSA:3.40.50.300 1 203 1.3E-70 T 14-10-2018 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 Gene3D G3DSA:2.40.30.10 338 393 2.5E-30 T 14-10-2018 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.5E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.209 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CF65_00931 321c4b11b16dffc2eeab615e21af467b 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 Pfam PF10415 Fumarase C C-terminus 408 461 2.8E-25 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 Gene3D G3DSA:1.10.275.10 4 138 1.3E-55 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 SUPERFAMILY SSF48557 3 460 7.85E-158 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 461 2.0E-249 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 Pfam PF00206 Lyase 11 342 1.7E-111 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 Gene3D G3DSA:1.10.40.30 408 464 1.5E-29 T 14-10-2018 CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 462 92.0 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 Gene3D G3DSA:1.20.200.10 139 406 5.7E-116 T 14-10-2018 CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 6.3E-36 T 14-10-2018 IPR000362 Fumarate lyase family CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 6.3E-36 T 14-10-2018 IPR000362 Fumarate lyase family CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 6.3E-36 T 14-10-2018 IPR000362 Fumarate lyase family CF65_01717 fa65f12ae3d5ac94dea27579b76f05c6 464 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 6.3E-36 T 14-10-2018 IPR000362 Fumarate lyase family CF65_00915 065c237b12b06d11053cef39656cb32d 154 Pfam PF00156 Phosphoribosyl transferase domain 15 144 5.0E-14 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CF65_00915 065c237b12b06d11053cef39656cb32d 154 SUPERFAMILY SSF53271 4 143 2.9E-28 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like CF65_00915 065c237b12b06d11053cef39656cb32d 154 Gene3D G3DSA:3.40.50.2020 1 153 1.4E-39 T 14-10-2018 CF65_00915 065c237b12b06d11053cef39656cb32d 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 154 39.089 T 14-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 CF65_02565 c305982c97071915b789718106b5e254 210 SUPERFAMILY SSF52518 3 84 1.77E-18 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_02565 c305982c97071915b789718106b5e254 210 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 84 1.5E-12 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CF65_02565 c305982c97071915b789718106b5e254 210 Gene3D G3DSA:3.40.50.970 1 106 9.7E-24 T 14-10-2018 CF65_00768 d5442de558d0fbc837e5bdd2f643cc34 305 Gene3D G3DSA:2.60.200.30 140 277 3.4E-89 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CF65_00768 d5442de558d0fbc837e5bdd2f643cc34 305 Gene3D G3DSA:3.40.50.10330 35 300 3.4E-89 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 CF65_00768 d5442de558d0fbc837e5bdd2f643cc34 305 Hamap MF_00361 NAD kinase [nadK]. 17 300 33.354 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CF65_00768 d5442de558d0fbc837e5bdd2f643cc34 305 SUPERFAMILY SSF111331 18 300 1.44E-85 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CF65_00768 d5442de558d0fbc837e5bdd2f643cc34 305 Pfam PF01513 ATP-NAD kinase 18 284 2.1E-73 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CF65_00003 808ce0b911453affa0da7e4df5d5a947 358 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 350 2.4E-136 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CF65_00003 808ce0b911453affa0da7e4df5d5a947 358 Gene3D G3DSA:1.20.1050.90 120 297 3.0E-83 T 14-10-2018 CF65_00003 808ce0b911453affa0da7e4df5d5a947 358 Gene3D G3DSA:3.40.50.300 6 331 3.0E-83 T 14-10-2018 CF65_00003 808ce0b911453affa0da7e4df5d5a947 358 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 358 95.875 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CF65_00003 808ce0b911453affa0da7e4df5d5a947 358 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 341 2.0E-41 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CF65_00003 808ce0b911453affa0da7e4df5d5a947 358 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CF65_00003 808ce0b911453affa0da7e4df5d5a947 358 SUPERFAMILY SSF52540 1 340 2.02E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00003 808ce0b911453affa0da7e4df5d5a947 358 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CF65_02479 574684f4dd492589c9741f489fe86004 356 Pfam PF00691 OmpA family 242 333 3.3E-24 T 14-10-2018 IPR006665 OmpA-like domain CF65_02479 574684f4dd492589c9741f489fe86004 356 SUPERFAMILY SSF103088 231 352 3.66E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily CF65_02479 574684f4dd492589c9741f489fe86004 356 ProSitePatterns PS01068 OmpA-like domain. 275 319 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CF65_02479 574684f4dd492589c9741f489fe86004 356 PRINTS PR01022 Outer membrane protein A signature 297 316 3.9E-13 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CF65_02479 574684f4dd492589c9741f489fe86004 356 PRINTS PR01022 Outer membrane protein A signature 117 133 3.9E-13 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CF65_02479 574684f4dd492589c9741f489fe86004 356 PRINTS PR01022 Outer membrane protein A signature 231 246 3.9E-13 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CF65_02479 574684f4dd492589c9741f489fe86004 356 PRINTS PR01022 Outer membrane protein A signature 331 344 3.9E-13 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CF65_02479 574684f4dd492589c9741f489fe86004 356 Gene3D G3DSA:3.30.1330.60 231 356 1.5E-43 T 14-10-2018 IPR036737 OmpA-like domain superfamily CF65_02479 574684f4dd492589c9741f489fe86004 356 Pfam PF01389 OmpA-like transmembrane domain 27 221 3.6E-61 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CF65_02479 574684f4dd492589c9741f489fe86004 356 PRINTS PR01021 OMPA domain signature 288 304 1.2E-22 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CF65_02479 574684f4dd492589c9741f489fe86004 356 PRINTS PR01021 OMPA domain signature 243 265 1.2E-22 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CF65_02479 574684f4dd492589c9741f489fe86004 356 PRINTS PR01021 OMPA domain signature 273 288 1.2E-22 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CF65_02479 574684f4dd492589c9741f489fe86004 356 Gene3D G3DSA:2.40.160.20 14 230 8.4E-58 T 14-10-2018 CF65_02479 574684f4dd492589c9741f489fe86004 356 SUPERFAMILY SSF56925 26 223 3.66E-35 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CF65_00766 b2a87c7cf6d1bd20a3196f508b8059cf 192 SUPERFAMILY SSF58014 40 136 2.35E-24 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CF65_00766 b2a87c7cf6d1bd20a3196f508b8059cf 192 Pfam PF01025 GrpE 28 191 7.5E-51 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CF65_00766 b2a87c7cf6d1bd20a3196f508b8059cf 192 Hamap MF_01151 Protein GrpE [grpE]. 5 192 21.561 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CF65_00766 b2a87c7cf6d1bd20a3196f508b8059cf 192 Gene3D G3DSA:3.90.20.20 31 135 3.6E-31 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CF65_00766 b2a87c7cf6d1bd20a3196f508b8059cf 192 ProSitePatterns PS01071 grpE protein signature. 147 190 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CF65_00766 b2a87c7cf6d1bd20a3196f508b8059cf 192 SUPERFAMILY SSF51064 137 191 1.44E-18 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CF65_00766 b2a87c7cf6d1bd20a3196f508b8059cf 192 Gene3D G3DSA:2.30.22.10 136 192 9.0E-24 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CF65_00766 b2a87c7cf6d1bd20a3196f508b8059cf 192 PRINTS PR00773 GrpE protein signature 60 76 2.2E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CF65_00766 b2a87c7cf6d1bd20a3196f508b8059cf 192 PRINTS PR00773 GrpE protein signature 88 103 2.2E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CF65_00766 b2a87c7cf6d1bd20a3196f508b8059cf 192 PRINTS PR00773 GrpE protein signature 144 159 2.2E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CF65_00766 b2a87c7cf6d1bd20a3196f508b8059cf 192 PRINTS PR00773 GrpE protein signature 171 190 2.2E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CF65_00028 0de39bf8c9d603a90b57ce16b2f18152 873 Pfam PF04851 Type III restriction enzyme, res subunit 1 241 3.3E-17 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CF65_00028 0de39bf8c9d603a90b57ce16b2f18152 873 Gene3D G3DSA:3.40.50.300 43 261 8.0E-18 T 14-10-2018 CF65_00028 0de39bf8c9d603a90b57ce16b2f18152 873 SUPERFAMILY SSF52540 57 406 3.08E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00028 0de39bf8c9d603a90b57ce16b2f18152 873 SUPERFAMILY SSF52540 45 250 2.47E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00795 7fb1aaf6ccb60dac9b0fd8ddabacf671 297 SUPERFAMILY SSF53807 19 282 3.81E-58 T 14-10-2018 CF65_00795 7fb1aaf6ccb60dac9b0fd8ddabacf671 297 Gene3D G3DSA:3.40.50.1980 16 126 1.4E-33 T 14-10-2018 CF65_00795 7fb1aaf6ccb60dac9b0fd8ddabacf671 297 Pfam PF01497 Periplasmic binding protein 41 272 2.1E-37 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain CF65_00795 7fb1aaf6ccb60dac9b0fd8ddabacf671 297 Gene3D G3DSA:3.40.50.1980 128 297 8.8E-40 T 14-10-2018 CF65_01869 cd827e3411511d45df592d86a6162adc 460 SUPERFAMILY SSF50494 37 264 5.36E-67 T 14-10-2018 IPR009003 Peptidase S1, PA clan CF65_01869 cd827e3411511d45df592d86a6162adc 460 SUPERFAMILY SSF50156 388 456 1.22E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 CF65_01869 cd827e3411511d45df592d86a6162adc 460 SMART SM00228 273 355 5.4E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 CF65_01869 cd827e3411511d45df592d86a6162adc 460 SMART SM00228 380 452 1.9E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 CF65_01869 cd827e3411511d45df592d86a6162adc 460 SUPERFAMILY SSF50156 231 355 3.42E-26 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 CF65_01869 cd827e3411511d45df592d86a6162adc 460 PRINTS PR00834 HtrA/DegQ protease family signature 205 222 2.0E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CF65_01869 cd827e3411511d45df592d86a6162adc 460 PRINTS PR00834 HtrA/DegQ protease family signature 169 193 2.0E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CF65_01869 cd827e3411511d45df592d86a6162adc 460 PRINTS PR00834 HtrA/DegQ protease family signature 313 325 2.0E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CF65_01869 cd827e3411511d45df592d86a6162adc 460 PRINTS PR00834 HtrA/DegQ protease family signature 227 244 2.0E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CF65_01869 cd827e3411511d45df592d86a6162adc 460 PRINTS PR00834 HtrA/DegQ protease family signature 107 119 2.0E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CF65_01869 cd827e3411511d45df592d86a6162adc 460 PRINTS PR00834 HtrA/DegQ protease family signature 128 148 2.0E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CF65_01869 cd827e3411511d45df592d86a6162adc 460 Gene3D G3DSA:2.30.42.10 370 460 1.0E-23 T 14-10-2018 CF65_01869 cd827e3411511d45df592d86a6162adc 460 Gene3D G3DSA:2.40.10.120 37 267 3.3E-85 T 14-10-2018 CF65_01869 cd827e3411511d45df592d86a6162adc 460 Pfam PF13365 Trypsin-like peptidase domain 97 234 8.4E-32 T 14-10-2018 CF65_01869 cd827e3411511d45df592d86a6162adc 460 Gene3D G3DSA:2.30.42.10 268 369 1.1E-28 T 14-10-2018 CF65_01869 cd827e3411511d45df592d86a6162adc 460 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 269 351 4.4E-18 T 14-10-2018 IPR001478 PDZ domain GO:0005515 CF65_01869 cd827e3411511d45df592d86a6162adc 460 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 383 448 1.3E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 CF65_01869 cd827e3411511d45df592d86a6162adc 460 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 458 5.9E-159 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 324 399 3.5E-33 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Pfam PF12826 Helix-hairpin-helix motif 511 574 7.6E-22 T 14-10-2018 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 SMART SM00278 447 466 250.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 SMART SM00278 545 564 1.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 SMART SM00278 513 532 62.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 SMART SM00278 481 500 5.6 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Pfam PF14520 Helix-hairpin-helix domain 447 501 1.4E-5 T 14-10-2018 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Gene3D G3DSA:1.10.150.20 433 506 2.1E-28 T 14-10-2018 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 333 348 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 SUPERFAMILY SSF52113 591 669 9.32E-21 T 14-10-2018 IPR036420 BRCT domain superfamily CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 SUPERFAMILY SSF47781 404 585 2.45E-62 T 14-10-2018 IPR010994 RuvA domain 2-like CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 117 146 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 593 665 1.0E-13 T 14-10-2018 IPR001357 BRCT domain CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 SMART SM00532 4 449 1.2E-285 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 SMART SM00292 594 670 6.7E-13 T 14-10-2018 IPR001357 BRCT domain CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Gene3D G3DSA:1.10.150.20 507 583 1.4E-29 T 14-10-2018 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Gene3D G3DSA:2.20.70.80 393 432 4.3E-17 T 14-10-2018 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Gene3D G3DSA:3.30.1490.70 82 320 2.2E-101 T 14-10-2018 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 2.0E-10 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 SUPERFAMILY SSF56091 3 318 6.88E-123 T 14-10-2018 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Hamap MF_01588 DNA ligase [ligA]. 3 668 53.578 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Gene3D G3DSA:3.30.470.30 121 254 2.2E-101 T 14-10-2018 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Gene3D G3DSA:1.10.287.610 2 69 2.2E-30 T 14-10-2018 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 320 9.5E-141 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 SUPERFAMILY SSF50249 320 401 3.26E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Gene3D G3DSA:3.40.50.10190 584 669 7.0E-29 T 14-10-2018 IPR036420 BRCT domain superfamily CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 PIRSF PIRSF001604 1 670 1.8E-252 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 664 4.7E-272 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CF65_02409 7f10744f9b7d52b95d1f8c9f5257c4ee 670 Gene3D G3DSA:2.40.50.140 321 392 1.0E-32 T 14-10-2018 CF65_02673 63ec33c5426a96565cd4777f6499b8c4 332 Gene3D G3DSA:3.40.50.2300 162 293 2.9E-71 T 14-10-2018 CF65_02673 63ec33c5426a96565cd4777f6499b8c4 332 SMART SM00354 6 76 1.5E-22 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CF65_02673 63ec33c5426a96565cd4777f6499b8c4 332 Gene3D G3DSA:3.40.50.2300 68 310 2.9E-71 T 14-10-2018 CF65_02673 63ec33c5426a96565cd4777f6499b8c4 332 Pfam PF13377 Periplasmic binding protein-like domain 173 331 3.4E-27 T 14-10-2018 CF65_02673 63ec33c5426a96565cd4777f6499b8c4 332 SUPERFAMILY SSF53822 63 312 3.62E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_02673 63ec33c5426a96565cd4777f6499b8c4 332 Gene3D G3DSA:1.10.260.40 1 63 2.2E-14 T 14-10-2018 CF65_02673 63ec33c5426a96565cd4777f6499b8c4 332 SUPERFAMILY SSF47413 5 64 3.73E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_02673 63ec33c5426a96565cd4777f6499b8c4 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 3.5E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 TIGRFAM TIGR01530 nadN: NAD nucleotidase 38 581 0.0 T 14-10-2018 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN GO:0008253|GO:0009166 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 SUPERFAMILY SSF55816 410 593 7.85E-39 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 Gene3D G3DSA:3.60.21.10 28 381 6.8E-132 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 Pfam PF02872 5'-nucleotidase, C-terminal domain 411 552 4.3E-30 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 ProSitePatterns PS00786 5'-nucleotidase signature 2. 120 131 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 Pfam PF00149 Calcineurin-like phosphoesterase 39 253 1.5E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 SUPERFAMILY SSF56300 36 320 5.32E-74 T 14-10-2018 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 PRINTS PR01607 Apyrase family signature 445 468 6.6E-31 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 PRINTS PR01607 Apyrase family signature 36 54 6.6E-31 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 PRINTS PR01607 Apyrase family signature 237 260 6.6E-31 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 PRINTS PR01607 Apyrase family signature 284 304 6.6E-31 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 PRINTS PR01607 Apyrase family signature 218 235 6.6E-31 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 PRINTS PR01607 Apyrase family signature 527 546 6.6E-31 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_00536 4718363b2a06c7d35aad7ee9dcb7b09d 604 Gene3D G3DSA:3.90.780.10 382 604 4.4E-84 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_02494 67695903499446111ec5a421d00e509c 238 Pfam PF14256 YwiC-like protein 5 129 3.1E-38 T 14-10-2018 IPR025576 YwiC-like protein CF65_00461 38b59fc28f2a38b65fca8210697fcd61 175 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 173 3.3E-87 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CF65_00461 38b59fc28f2a38b65fca8210697fcd61 175 Pfam PF00227 Proteasome subunit 2 171 3.5E-23 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 CF65_00461 38b59fc28f2a38b65fca8210697fcd61 175 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 173 43.554 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CF65_00461 38b59fc28f2a38b65fca8210697fcd61 175 Gene3D G3DSA:3.60.20.10 1 174 1.3E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CF65_00461 38b59fc28f2a38b65fca8210697fcd61 175 SUPERFAMILY SSF56235 1 173 9.57E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CF65_00461 38b59fc28f2a38b65fca8210697fcd61 175 PIRSF PIRSF039093 1 175 1.5E-88 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CF65_00557 76355216c87d6923872eb96f7a0acd9b 567 SUPERFAMILY SSF55874 443 562 1.44E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00557 76355216c87d6923872eb96f7a0acd9b 567 SMART SM00387 473 566 2.5E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00557 76355216c87d6923872eb96f7a0acd9b 567 Pfam PF07730 Histidine kinase 364 432 6.7E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CF65_00557 76355216c87d6923872eb96f7a0acd9b 567 PIRSF PIRSF003167 1 567 5.0E-153 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CF65_00557 76355216c87d6923872eb96f7a0acd9b 567 Gene3D G3DSA:1.20.1480.50 144 235 7.5E-10 T 14-10-2018 CF65_00557 76355216c87d6923872eb96f7a0acd9b 567 Pfam PF00672 HAMP domain 176 223 1.7E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CF65_00557 76355216c87d6923872eb96f7a0acd9b 567 Gene3D G3DSA:3.30.565.10 432 565 3.8E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00557 76355216c87d6923872eb96f7a0acd9b 567 Gene3D G3DSA:1.20.120.960 38 143 8.0E-14 T 14-10-2018 CF65_00557 76355216c87d6923872eb96f7a0acd9b 567 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 129 2.1E-21 T 14-10-2018 IPR029095 NarX-like, N-terminal CF65_00557 76355216c87d6923872eb96f7a0acd9b 567 SUPERFAMILY SSF158472 177 225 2.35E-6 T 14-10-2018 CF65_00557 76355216c87d6923872eb96f7a0acd9b 567 SMART SM00304 175 228 1.6E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CF65_00557 76355216c87d6923872eb96f7a0acd9b 567 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 562 1.4E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00566 7efa55b2131e882c60293627bc2a8680 112 PRINTS PR01034 Ribosomal protein S12 signature 98 110 6.8E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00566 7efa55b2131e882c60293627bc2a8680 112 PRINTS PR01034 Ribosomal protein S12 signature 46 65 6.8E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00566 7efa55b2131e882c60293627bc2a8680 112 PRINTS PR01034 Ribosomal protein S12 signature 65 82 6.8E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00566 7efa55b2131e882c60293627bc2a8680 112 PRINTS PR01034 Ribosomal protein S12 signature 30 45 6.8E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00566 7efa55b2131e882c60293627bc2a8680 112 PRINTS PR01034 Ribosomal protein S12 signature 15 30 6.8E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00566 7efa55b2131e882c60293627bc2a8680 112 PRINTS PR01034 Ribosomal protein S12 signature 82 98 6.8E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00566 7efa55b2131e882c60293627bc2a8680 112 PIRSF PIRSF002133 1 112 9.0E-52 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00566 7efa55b2131e882c60293627bc2a8680 112 ProSitePatterns PS00055 Ribosomal protein S12 signature. 31 38 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00566 7efa55b2131e882c60293627bc2a8680 112 Gene3D G3DSA:2.40.50.140 1 112 1.8E-57 T 14-10-2018 CF65_00566 7efa55b2131e882c60293627bc2a8680 112 Pfam PF00164 Ribosomal protein S12/S23 3 111 3.2E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00566 7efa55b2131e882c60293627bc2a8680 112 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 112 5.9E-64 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00566 7efa55b2131e882c60293627bc2a8680 112 SUPERFAMILY SSF50249 3 111 1.71E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_00086 3646f2f97e368a02c4c2f1768edc1128 568 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 431 543 1.5E-7 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CF65_00086 3646f2f97e368a02c4c2f1768edc1128 568 PIRSF PIRSF004983 1 568 1.6E-185 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CF65_00086 3646f2f97e368a02c4c2f1768edc1128 568 Gene3D G3DSA:3.40.50.1220 220 344 3.7E-44 T 14-10-2018 CF65_00086 3646f2f97e368a02c4c2f1768edc1128 568 Gene3D G3DSA:3.40.50.970 1 200 2.1E-55 T 14-10-2018 CF65_00086 3646f2f97e368a02c4c2f1768edc1128 568 SUPERFAMILY SSF52518 7 192 3.24E-33 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_00086 3646f2f97e368a02c4c2f1768edc1128 568 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 561 32.024 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CF65_00086 3646f2f97e368a02c4c2f1768edc1128 568 SUPERFAMILY SSF52518 372 561 1.08E-31 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_00086 3646f2f97e368a02c4c2f1768edc1128 568 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 437 4.6E-140 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CF65_00086 3646f2f97e368a02c4c2f1768edc1128 568 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 184 2.9E-28 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CF65_00086 3646f2f97e368a02c4c2f1768edc1128 568 Gene3D G3DSA:3.40.50.970 367 564 8.4E-54 T 14-10-2018 CF65_00086 3646f2f97e368a02c4c2f1768edc1128 568 Pfam PF16582 Middle domain of thiamine pyrophosphate 190 396 5.1E-88 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CF65_02456 8aa4075bbfe0ac41340a14f61aa6a09c 200 Pfam PF04284 Protein of unknown function (DUF441) 60 197 4.0E-44 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CF65_02456 8aa4075bbfe0ac41340a14f61aa6a09c 200 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 72 182 3.0E-43 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CF65_02456 8aa4075bbfe0ac41340a14f61aa6a09c 200 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 56 200 18.801 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CF65_01985 53efa2c8d2dc08cc88cf794dd895163e 885 SUPERFAMILY SSF52922 699 884 2.09E-59 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CF65_01985 53efa2c8d2dc08cc88cf794dd895163e 885 Gene3D G3DSA:3.40.50.970 56 468 3.4E-130 T 14-10-2018 CF65_01985 53efa2c8d2dc08cc88cf794dd895163e 885 Gene3D G3DSA:3.40.50.970 469 703 7.4E-107 T 14-10-2018 CF65_01985 53efa2c8d2dc08cc88cf794dd895163e 885 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 105 295 9.1E-11 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CF65_01985 53efa2c8d2dc08cc88cf794dd895163e 885 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 6 884 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CF65_01985 53efa2c8d2dc08cc88cf794dd895163e 885 Gene3D G3DSA:3.40.50.920 704 885 2.7E-71 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CF65_01985 53efa2c8d2dc08cc88cf794dd895163e 885 PIRSF PIRSF000156 1 885 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CF65_01985 53efa2c8d2dc08cc88cf794dd895163e 885 SUPERFAMILY SSF52518 471 697 5.18E-96 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_01985 53efa2c8d2dc08cc88cf794dd895163e 885 SUPERFAMILY SSF52518 57 466 4.07E-136 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_01213 530abe64b68b26a183efaefbaf721f0b 193 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 130 190 3.5E-22 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CF65_01213 530abe64b68b26a183efaefbaf721f0b 193 SMART SM00278 140 159 0.65 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CF65_01213 530abe64b68b26a183efaefbaf721f0b 193 SMART SM00278 170 189 8.1 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CF65_01213 530abe64b68b26a183efaefbaf721f0b 193 Gene3D G3DSA:1.10.150.280 120 191 1.3E-22 T 14-10-2018 CF65_01213 530abe64b68b26a183efaefbaf721f0b 193 SUPERFAMILY SSF47781 116 189 6.0E-27 T 14-10-2018 IPR010994 RuvA domain 2-like CF65_01213 530abe64b68b26a183efaefbaf721f0b 193 Pfam PF12836 Helix-hairpin-helix motif 129 191 2.9E-24 T 14-10-2018 CF65_00606 f16497182e69c67a39298d1f63c87b8c 444 SUPERFAMILY SSF50156 192 286 4.99E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 CF65_00606 f16497182e69c67a39298d1f63c87b8c 444 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 443 4.5E-146 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CF65_00606 f16497182e69c67a39298d1f63c87b8c 444 SMART SM00228 114 185 0.27 T 14-10-2018 IPR001478 PDZ domain GO:0005515 CF65_00606 f16497182e69c67a39298d1f63c87b8c 444 SMART SM00228 210 276 0.97 T 14-10-2018 IPR001478 PDZ domain GO:0005515 CF65_00606 f16497182e69c67a39298d1f63c87b8c 444 Pfam PF02163 Peptidase family M50 10 431 2.0E-87 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 CF65_00606 f16497182e69c67a39298d1f63c87b8c 444 SUPERFAMILY SSF50156 88 188 1.89E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 CF65_00606 f16497182e69c67a39298d1f63c87b8c 444 Gene3D G3DSA:2.30.42.10 125 219 1.9E-26 T 14-10-2018 CF65_00606 f16497182e69c67a39298d1f63c87b8c 444 Gene3D G3DSA:2.30.42.10 224 301 1.2E-10 T 14-10-2018 CF65_00969 1451b50097cf435b967a8fa1c8008546 266 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 95 125 1.6E-8 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CF65_00969 1451b50097cf435b967a8fa1c8008546 266 Gene3D G3DSA:3.90.79.10 127 259 1.9E-37 T 14-10-2018 CF65_00969 1451b50097cf435b967a8fa1c8008546 266 Gene3D G3DSA:3.90.79.20 1 126 1.1E-33 T 14-10-2018 CF65_00969 1451b50097cf435b967a8fa1c8008546 266 SUPERFAMILY SSF55811 4 97 1.01E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CF65_00969 1451b50097cf435b967a8fa1c8008546 266 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 259 41.189 T 14-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CF65_00969 1451b50097cf435b967a8fa1c8008546 266 Pfam PF00293 NUDIX domain 133 238 2.8E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CF65_00969 1451b50097cf435b967a8fa1c8008546 266 SUPERFAMILY SSF55811 79 253 2.44E-38 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CF65_02048 fd737212f21fafdc15477682551a2ce9 252 SMART SM00420 6 58 9.9E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_02048 fd737212f21fafdc15477682551a2ce9 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 9.2E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_02048 fd737212f21fafdc15477682551a2ce9 252 SUPERFAMILY SSF100950 77 233 1.41E-35 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_02048 fd737212f21fafdc15477682551a2ce9 252 SMART SM01134 73 233 3.3E-63 T 14-10-2018 CF65_02048 fd737212f21fafdc15477682551a2ce9 252 SUPERFAMILY SSF46785 5 72 1.0E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_02048 fd737212f21fafdc15477682551a2ce9 252 Gene3D G3DSA:3.40.50.1360 75 228 2.6E-7 T 14-10-2018 CF65_02048 fd737212f21fafdc15477682551a2ce9 252 Gene3D G3DSA:1.10.10.10 8 57 1.0E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02048 fd737212f21fafdc15477682551a2ce9 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.1E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_02048 fd737212f21fafdc15477682551a2ce9 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.1E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_02048 fd737212f21fafdc15477682551a2ce9 252 Pfam PF00455 DeoR C terminal sensor domain 78 232 1.4E-48 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain CF65_02105 d7010c71e884d4a443867ab206285ed7 442 SUPERFAMILY SSF140570 119 281 7.72E-76 T 14-10-2018 IPR036141 MukF, middle domain superfamily CF65_02105 d7010c71e884d4a443867ab206285ed7 442 SUPERFAMILY SSF46785 8 118 2.0E-49 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_02105 d7010c71e884d4a443867ab206285ed7 442 Pfam PF17193 MukF C-terminal domain 283 440 7.1E-76 T 14-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain CF65_02105 d7010c71e884d4a443867ab206285ed7 442 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 56.917 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 CF65_02105 d7010c71e884d4a443867ab206285ed7 442 Gene3D G3DSA:1.10.10.10 24 118 7.0E-51 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02105 d7010c71e884d4a443867ab206285ed7 442 Gene3D G3DSA:1.10.225.40 353 442 2.4E-41 T 14-10-2018 IPR038198 MukF, C-terminal domain superfamily CF65_02105 d7010c71e884d4a443867ab206285ed7 442 Gene3D G3DSA:1.20.58.590 119 311 3.9E-86 T 14-10-2018 IPR036141 MukF, middle domain superfamily CF65_02105 d7010c71e884d4a443867ab206285ed7 442 Pfam PF17192 MukF middle domain 121 281 1.8E-83 T 14-10-2018 IPR033440 Chromosome partition protein MukF, middle domain CF65_02105 d7010c71e884d4a443867ab206285ed7 442 PIRSF PIRSF018282 1 440 4.3E-249 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 CF65_02105 d7010c71e884d4a443867ab206285ed7 442 Pfam PF03882 MukF winged-helix domain 3 117 1.4E-57 T 14-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain CF65_01413 a7263e403d4107ebd6b03115bbe68496 336 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 75 88 - T 14-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 CF65_01413 a7263e403d4107ebd6b03115bbe68496 336 SUPERFAMILY SSF55120 4 333 8.34E-97 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01413 a7263e403d4107ebd6b03115bbe68496 336 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 15 165 6.5E-38 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01413 a7263e403d4107ebd6b03115bbe68496 336 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 185 331 1.2E-18 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01413 a7263e403d4107ebd6b03115bbe68496 336 Gene3D G3DSA:3.30.2350.20 15 331 2.2E-107 T 14-10-2018 CF65_01413 a7263e403d4107ebd6b03115bbe68496 336 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 3 336 28.192 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01413 a7263e403d4107ebd6b03115bbe68496 336 Gene3D G3DSA:3.30.2340.10 165 296 2.2E-107 T 14-10-2018 CF65_01413 a7263e403d4107ebd6b03115bbe68496 336 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 8 335 1.1E-90 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02046 14d67d83ba305880d19a8e8aab341383 454 PIRSF PIRSF006304 2 451 3.6E-166 T 14-10-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 CF65_02046 14d67d83ba305880d19a8e8aab341383 454 TIGRFAM TIGR00827 EIIC-GAT: PTS system, galactitol-specific IIC component 9 411 1.0E-191 T 14-10-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 CF65_02046 14d67d83ba305880d19a8e8aab341383 454 Pfam PF03611 PTS system sugar-specific permease component 8 385 1.3E-80 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CF65_02353 f2d99180a86edf99f5fd51eb7ad649e9 278 SMART SM00382 33 220 2.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02353 f2d99180a86edf99f5fd51eb7ad649e9 278 Pfam PF00005 ABC transporter 25 170 3.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02353 f2d99180a86edf99f5fd51eb7ad649e9 278 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02353 f2d99180a86edf99f5fd51eb7ad649e9 278 SUPERFAMILY SSF52540 8 246 1.32E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02353 f2d99180a86edf99f5fd51eb7ad649e9 278 Gene3D G3DSA:3.40.50.300 7 276 3.7E-76 T 14-10-2018 CF65_00583 f0d636f9b14e1ce9dca26e58e9e4adbb 291 Pfam PF01694 Rhomboid family 145 283 6.0E-31 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CF65_00583 f0d636f9b14e1ce9dca26e58e9e4adbb 291 SUPERFAMILY SSF144091 107 287 5.23E-41 T 14-10-2018 CF65_00583 f0d636f9b14e1ce9dca26e58e9e4adbb 291 Gene3D G3DSA:1.20.1540.10 104 291 1.5E-58 T 14-10-2018 IPR035952 Rhomboid-like superfamily CF65_02181 958fd8667c1bb43665c5bd22310a70db 92 SMART SM00530 12 65 3.6E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CF65_02181 958fd8667c1bb43665c5bd22310a70db 92 Pfam PF01381 Helix-turn-helix 19 63 4.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CF65_02181 958fd8667c1bb43665c5bd22310a70db 92 SUPERFAMILY SSF47413 8 87 8.11E-23 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_02181 958fd8667c1bb43665c5bd22310a70db 92 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 81 4.9E-30 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 CF65_02181 958fd8667c1bb43665c5bd22310a70db 92 Gene3D G3DSA:1.10.260.40 1 81 9.2E-30 T 14-10-2018 CF65_02936 c2a685cafbcf5df9c1ea7fa838c8ad51 228 SUPERFAMILY SSF56784 11 206 8.25E-30 T 14-10-2018 IPR036412 HAD-like superfamily CF65_02936 c2a685cafbcf5df9c1ea7fa838c8ad51 228 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 1 225 1.5E-86 T 14-10-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 CF65_02936 c2a685cafbcf5df9c1ea7fa838c8ad51 228 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 2 198 1.0E-52 T 14-10-2018 IPR005519 Acid phosphatase, class B-like CF65_02936 c2a685cafbcf5df9c1ea7fa838c8ad51 228 Gene3D G3DSA:3.40.50.1000 1 228 9.3E-89 T 14-10-2018 IPR023214 HAD superfamily CF65_02936 c2a685cafbcf5df9c1ea7fa838c8ad51 228 PIRSF PIRSF019271 1 228 8.3E-95 T 14-10-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 CF65_00706 fbde7b412e335d214cdf0ce85a00fc51 267 Pfam PF00588 SpoU rRNA Methylase family 26 175 4.0E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CF65_00706 fbde7b412e335d214cdf0ce85a00fc51 267 Gene3D G3DSA:1.10.8.590 197 267 1.3E-28 T 14-10-2018 CF65_00706 fbde7b412e335d214cdf0ce85a00fc51 267 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 22 259 8.5E-84 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 CF65_00706 fbde7b412e335d214cdf0ce85a00fc51 267 PIRSF PIRSF004808 20 265 1.3E-70 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 CF65_00706 fbde7b412e335d214cdf0ce85a00fc51 267 SUPERFAMILY SSF75217 22 185 3.14E-35 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases CF65_00706 fbde7b412e335d214cdf0ce85a00fc51 267 Gene3D G3DSA:3.40.1280.10 21 185 5.6E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_01355 778e3ba9f721fb70e7fa33224996ea22 324 SUPERFAMILY SSF55120 76 320 5.14E-80 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01355 778e3ba9f721fb70e7fa33224996ea22 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01355 778e3ba9f721fb70e7fa33224996ea22 324 Pfam PF01479 S4 domain 17 58 4.6E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01355 778e3ba9f721fb70e7fa33224996ea22 324 Gene3D G3DSA:3.10.290.10 2 75 2.6E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CF65_01355 778e3ba9f721fb70e7fa33224996ea22 324 Gene3D G3DSA:3.30.2350.10 83 315 3.4E-72 T 14-10-2018 CF65_01355 778e3ba9f721fb70e7fa33224996ea22 324 Pfam PF00849 RNA pseudouridylate synthase 91 241 9.4E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01355 778e3ba9f721fb70e7fa33224996ea22 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 311 6.9E-109 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01355 778e3ba9f721fb70e7fa33224996ea22 324 SMART SM00363 17 82 1.8E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01355 778e3ba9f721fb70e7fa33224996ea22 324 SUPERFAMILY SSF55174 16 68 1.14E-9 T 14-10-2018 CF65_00406 9b3522d4e6a1792ac54bb234b69acd11 131 SUPERFAMILY SSF81330 12 126 1.7E-35 T 14-10-2018 IPR036019 Gated mechanosensitive channel CF65_00406 9b3522d4e6a1792ac54bb234b69acd11 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 2.2E-14 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CF65_00406 9b3522d4e6a1792ac54bb234b69acd11 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.2E-14 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CF65_00406 9b3522d4e6a1792ac54bb234b69acd11 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 2.2E-14 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CF65_00406 9b3522d4e6a1792ac54bb234b69acd11 131 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 130 3.3E-54 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CF65_00406 9b3522d4e6a1792ac54bb234b69acd11 131 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 131 24.257 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CF65_00406 9b3522d4e6a1792ac54bb234b69acd11 131 Gene3D G3DSA:1.10.1200.120 3 131 1.1E-42 T 14-10-2018 IPR036019 Gated mechanosensitive channel CF65_00406 9b3522d4e6a1792ac54bb234b69acd11 131 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site CF65_00406 9b3522d4e6a1792ac54bb234b69acd11 131 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 130 3.8E-46 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CF65_01428 84bd2e9502dc077c6875d5f58e947482 286 Gene3D G3DSA:3.40.50.1220 124 244 3.2E-23 T 14-10-2018 CF65_01428 84bd2e9502dc077c6875d5f58e947482 286 Gene3D G3DSA:3.40.50.1100 245 266 9.4E-8 T 14-10-2018 CF65_01428 84bd2e9502dc077c6875d5f58e947482 286 Gene3D G3DSA:3.40.50.1100 268 283 9.4E-8 T 14-10-2018 CF65_01428 84bd2e9502dc077c6875d5f58e947482 286 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 111 4.0E-23 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CF65_01428 84bd2e9502dc077c6875d5f58e947482 286 SUPERFAMILY SSF53686 242 285 5.24E-10 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_01428 84bd2e9502dc077c6875d5f58e947482 286 SUPERFAMILY SSF52518 4 118 2.51E-30 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_01428 84bd2e9502dc077c6875d5f58e947482 286 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 258 271 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CF65_01428 84bd2e9502dc077c6875d5f58e947482 286 Gene3D G3DSA:3.40.50.970 2 119 5.7E-33 T 14-10-2018 CF65_01428 84bd2e9502dc077c6875d5f58e947482 286 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 131 245 1.3E-21 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CF65_01428 84bd2e9502dc077c6875d5f58e947482 286 SUPERFAMILY SSF52467 95 245 7.01E-30 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CF65_00165 35a8a4365725c5df0d841ea45260c9bf 70 Gene3D G3DSA:3.30.50.10 1 66 4.1E-24 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 CF65_00165 35a8a4365725c5df0d841ea45260c9bf 70 Pfam PF03884 DNA gyrase inhibitor YacG 8 54 2.5E-24 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CF65_00165 35a8a4365725c5df0d841ea45260c9bf 70 SUPERFAMILY SSF57716 5 58 6.41E-21 T 14-10-2018 CF65_00165 35a8a4365725c5df0d841ea45260c9bf 70 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 67 19.278 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CF65_00085 b69a38dd91e4cd3964c23126d8bd8bd9 434 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 88 420 4.9E-104 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CF65_00085 b69a38dd91e4cd3964c23126d8bd8bd9 434 Gene3D G3DSA:3.60.120.10 1 427 2.5E-115 T 14-10-2018 IPR005801 ADC synthase GO:0009058 CF65_00085 b69a38dd91e4cd3964c23126d8bd8bd9 434 Pfam PF00425 chorismate binding enzyme 161 413 2.3E-65 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CF65_00085 b69a38dd91e4cd3964c23126d8bd8bd9 434 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 423 30.316 T 14-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CF65_00085 b69a38dd91e4cd3964c23126d8bd8bd9 434 SUPERFAMILY SSF56322 31 421 1.57E-88 T 14-10-2018 IPR005801 ADC synthase GO:0009058 CF65_01835 ab384e5dfb483bbc9f9b319c5b9570f4 138 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 1 136 2.8E-32 T 14-10-2018 IPR016052 Bacteriophage 933W, L0136 CF65_01835 ab384e5dfb483bbc9f9b319c5b9570f4 138 Pfam PF04076 Bacterial OB fold (BOF) protein 43 135 8.0E-29 T 14-10-2018 IPR005220 Bacterial OB-fold CF65_01835 ab384e5dfb483bbc9f9b319c5b9570f4 138 Gene3D G3DSA:2.40.50.200 22 138 8.9E-34 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily CF65_01835 ab384e5dfb483bbc9f9b319c5b9570f4 138 SUPERFAMILY SSF101756 44 135 8.5E-30 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily CF65_00148 7ac767757123be6f8ff56dcc68d0c45f 603 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CF65_00148 7ac767757123be6f8ff56dcc68d0c45f 603 SUPERFAMILY SSF52540 74 359 1.09E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00148 7ac767757123be6f8ff56dcc68d0c45f 603 Pfam PF00270 DEAD/DEAH box helicase 31 195 7.1E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CF65_00148 7ac767757123be6f8ff56dcc68d0c45f 603 Pfam PF03880 DbpA RNA binding domain 484 552 1.2E-20 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CF65_00148 7ac767757123be6f8ff56dcc68d0c45f 603 Gene3D G3DSA:3.40.50.300 1 214 2.9E-73 T 14-10-2018 CF65_00148 7ac767757123be6f8ff56dcc68d0c45f 603 Gene3D G3DSA:3.30.70.330 483 555 4.2E-12 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CF65_00148 7ac767757123be6f8ff56dcc68d0c45f 603 SMART SM00490 259 340 1.9E-32 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_00148 7ac767757123be6f8ff56dcc68d0c45f 603 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.0E-29 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_00148 7ac767757123be6f8ff56dcc68d0c45f 603 SMART SM00487 25 223 9.5E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_00148 7ac767757123be6f8ff56dcc68d0c45f 603 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 555 46.035 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 CF65_00148 7ac767757123be6f8ff56dcc68d0c45f 603 Gene3D G3DSA:3.40.50.300 219 437 2.0E-50 T 14-10-2018 CF65_02645 91793663099fc4fa9863d0f820f852d2 292 Gene3D G3DSA:3.90.25.10 159 285 8.8E-108 T 14-10-2018 CF65_02645 91793663099fc4fa9863d0f820f852d2 292 Gene3D G3DSA:3.40.50.720 5 278 8.8E-108 T 14-10-2018 CF65_02645 91793663099fc4fa9863d0f820f852d2 292 Pfam PF04321 RmlD substrate binding domain 3 287 2.2E-108 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CF65_02645 91793663099fc4fa9863d0f820f852d2 292 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 286 2.0E-103 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CF65_02645 91793663099fc4fa9863d0f820f852d2 292 SUPERFAMILY SSF51735 1 289 1.17E-100 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 Gene3D G3DSA:3.40.50.300 9 279 5.0E-67 T 14-10-2018 CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 Pfam PF00005 ABC transporter 19 185 2.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 Pfam PF16326 ABC transporter C-terminal domain 570 639 1.0E-19 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 SMART SM00382 28 230 2.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 SMART SM00382 344 515 6.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 Pfam PF00005 ABC transporter 335 469 1.8E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 Pfam PF12848 ABC transporter 224 293 9.5E-10 T 14-10-2018 IPR032781 ABC-transporter extension domain CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 SUPERFAMILY SSF52540 3 243 8.74E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 SUPERFAMILY SSF52540 311 516 2.13E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 Gene3D G3DSA:3.40.50.300 282 552 1.3E-64 T 14-10-2018 CF65_02573 0638360bbc8ed8dbac0a5b360a716c17 647 Gene3D G3DSA:1.10.287.380 560 643 3.5E-27 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CF65_01385 50d1f3e7630eac9b93ea6c415f4c79c2 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 9.8E-24 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal CF65_01385 50d1f3e7630eac9b93ea6c415f4c79c2 149 SUPERFAMILY SSF55658 1 57 1.05E-19 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CF65_01385 50d1f3e7630eac9b93ea6c415f4c79c2 149 Gene3D G3DSA:3.10.430.100 61 149 1.4E-29 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CF65_01385 50d1f3e7630eac9b93ea6c415f4c79c2 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.903 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01385 50d1f3e7630eac9b93ea6c415f4c79c2 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01385 50d1f3e7630eac9b93ea6c415f4c79c2 149 Gene3D G3DSA:3.40.5.10 1 50 1.3E-24 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01385 50d1f3e7630eac9b93ea6c415f4c79c2 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 6.3E-23 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01385 50d1f3e7630eac9b93ea6c415f4c79c2 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 5.6E-57 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01385 50d1f3e7630eac9b93ea6c415f4c79c2 149 SUPERFAMILY SSF55653 60 149 1.26E-24 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CF65_01759 19276d6f88c2c9a0ef49d5d25e8af63d 370 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 369 1.5E-156 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CF65_01759 19276d6f88c2c9a0ef49d5d25e8af63d 370 PIRSF PIRSF005622 1 370 5.3E-156 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CF65_01759 19276d6f88c2c9a0ef49d5d25e8af63d 370 Gene3D G3DSA:3.40.50.11740 67 305 1.8E-113 T 14-10-2018 CF65_01759 19276d6f88c2c9a0ef49d5d25e8af63d 370 Gene3D G3DSA:3.40.50.11750 33 264 1.8E-113 T 14-10-2018 CF65_01759 19276d6f88c2c9a0ef49d5d25e8af63d 370 Pfam PF01924 Hydrogenase formation hypA family 13 368 1.1E-151 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CF65_01759 19276d6f88c2c9a0ef49d5d25e8af63d 370 Gene3D G3DSA:1.10.10.2140 319 369 1.7E-21 T 14-10-2018 CF65_01235 f6dfd0240a29fa41a93659a745756273 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 4.7E-71 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CF65_01235 f6dfd0240a29fa41a93659a745756273 166 Gene3D G3DSA:3.30.230.10 74 166 2.7E-38 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_01235 f6dfd0240a29fa41a93659a745756273 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CF65_01235 f6dfd0240a29fa41a93659a745756273 166 Gene3D G3DSA:3.30.160.20 1 73 5.7E-34 T 14-10-2018 CF65_01235 f6dfd0240a29fa41a93659a745756273 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 2.7E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CF65_01235 f6dfd0240a29fa41a93659a745756273 166 SUPERFAMILY SSF54768 9 75 5.76E-24 T 14-10-2018 CF65_01235 f6dfd0240a29fa41a93659a745756273 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.7E-30 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CF65_01235 f6dfd0240a29fa41a93659a745756273 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.79 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CF65_01235 f6dfd0240a29fa41a93659a745756273 166 SUPERFAMILY SSF54211 79 159 5.31E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_01889 99f5f7d029df1cde2210c028e6cf3939 443 Pfam PF00860 Permease family 24 403 5.5E-85 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CF65_02335 c8f356eb8bfb60572130e8434209f198 179 SUPERFAMILY SSF46767 77 159 1.57E-31 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CF65_02335 c8f356eb8bfb60572130e8434209f198 179 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 157 8.1E-37 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CF65_02335 c8f356eb8bfb60572130e8434209f198 179 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 74 9.3E-11 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CF65_02335 c8f356eb8bfb60572130e8434209f198 179 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 158 1.0E-31 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CF65_02335 c8f356eb8bfb60572130e8434209f198 179 Gene3D G3DSA:3.30.160.70 4 73 1.9E-12 T 14-10-2018 CF65_02335 c8f356eb8bfb60572130e8434209f198 179 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 8 158 41.141 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CF65_02335 c8f356eb8bfb60572130e8434209f198 179 Gene3D G3DSA:1.10.10.10 76 159 1.8E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02335 c8f356eb8bfb60572130e8434209f198 179 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 128 134 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CF65_02335 c8f356eb8bfb60572130e8434209f198 179 SUPERFAMILY SSF53155 4 83 1.14E-14 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CF65_01738 7cc9f44c79e5818019bdd74178e9e2f7 262 Gene3D G3DSA:3.40.50.720 1 262 1.3E-60 T 14-10-2018 CF65_01738 7cc9f44c79e5818019bdd74178e9e2f7 262 PIRSF PIRSF000094 1 260 6.3E-122 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CF65_01738 7cc9f44c79e5818019bdd74178e9e2f7 262 SUPERFAMILY SSF51735 6 253 7.4E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01738 7cc9f44c79e5818019bdd74178e9e2f7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 6 3.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01738 7cc9f44c79e5818019bdd74178e9e2f7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01738 7cc9f44c79e5818019bdd74178e9e2f7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01738 7cc9f44c79e5818019bdd74178e9e2f7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01738 7cc9f44c79e5818019bdd74178e9e2f7 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 2.5E-84 T 14-10-2018 CF65_01710 b94c8ebe15b619fc049abe9de7195484 277 Pfam PF08443 RimK-like ATP-grasp domain 77 264 3.2E-67 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 CF65_01710 b94c8ebe15b619fc049abe9de7195484 277 SUPERFAMILY SSF56059 78 268 8.0E-45 T 14-10-2018 CF65_01710 b94c8ebe15b619fc049abe9de7195484 277 Gene3D G3DSA:3.40.50.20 1 94 1.2E-16 T 14-10-2018 CF65_01710 b94c8ebe15b619fc049abe9de7195484 277 Gene3D G3DSA:3.30.470.80 161 276 1.4E-41 T 14-10-2018 CF65_01710 b94c8ebe15b619fc049abe9de7195484 277 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 264 4.1E-79 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 CF65_01710 b94c8ebe15b619fc049abe9de7195484 277 Gene3D G3DSA:3.30.1490.20 95 159 9.3E-16 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CF65_02589 4cba1d8de1fe6e9ab1e7f439c2857ee5 203 Pfam PF02525 Flavodoxin-like fold 1 189 6.6E-46 T 14-10-2018 IPR003680 Flavodoxin-like fold CF65_02589 4cba1d8de1fe6e9ab1e7f439c2857ee5 203 Gene3D G3DSA:3.40.50.360 1 195 1.0E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily CF65_02589 4cba1d8de1fe6e9ab1e7f439c2857ee5 203 SUPERFAMILY SSF52218 1 191 2.01E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 Gene3D G3DSA:3.30.50.30 1 45 1.6E-18 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 SMART SM01086 315 409 2.0E-32 T 14-10-2018 IPR019489 Clp ATPase, C-terminal CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 SMART SM00994 6 45 1.1E-21 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 SUPERFAMILY SSF52540 60 400 3.11E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 Pfam PF07724 AAA domain (Cdc48 subfamily) 110 308 4.4E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 4 410 2.6E-209 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 Pfam PF06689 ClpX C4-type zinc finger 7 42 1.4E-18 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 315 389 2.8E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 SUPERFAMILY SSF57716 7 42 3.14E-11 T 14-10-2018 CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 Gene3D G3DSA:1.10.8.60 314 413 3.8E-38 T 14-10-2018 CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 413 52.503 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 Gene3D G3DSA:3.40.50.300 55 313 1.0E-106 T 14-10-2018 CF65_00120 c7c0ba9142002b64574cc87cf629812a 413 SMART SM00382 109 248 1.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02030 919d92facd2a87ef02d0766969a38681 643 Pfam PF03129 Anticodon binding domain 541 630 2.4E-23 T 14-10-2018 IPR004154 Anticodon-binding CF65_02030 919d92facd2a87ef02d0766969a38681 643 Gene3D G3DSA:3.40.50.800 532 642 3.0E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily CF65_02030 919d92facd2a87ef02d0766969a38681 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 9.4E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CF65_02030 919d92facd2a87ef02d0766969a38681 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 9.4E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CF65_02030 919d92facd2a87ef02d0766969a38681 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 9.4E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CF65_02030 919d92facd2a87ef02d0766969a38681 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 9.4E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CF65_02030 919d92facd2a87ef02d0766969a38681 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 9.4E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CF65_02030 919d92facd2a87ef02d0766969a38681 643 SUPERFAMILY SSF81271 3 61 2.62E-14 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CF65_02030 919d92facd2a87ef02d0766969a38681 643 SUPERFAMILY SSF55186 64 241 5.23E-63 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CF65_02030 919d92facd2a87ef02d0766969a38681 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 322 529 2.2E-51 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02030 919d92facd2a87ef02d0766969a38681 643 SUPERFAMILY SSF55681 243 525 1.33E-97 T 14-10-2018 CF65_02030 919d92facd2a87ef02d0766969a38681 643 Gene3D G3DSA:3.30.930.10 223 531 3.3E-130 T 14-10-2018 CF65_02030 919d92facd2a87ef02d0766969a38681 643 Gene3D G3DSA:3.10.20.30 3 62 3.1E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily CF65_02030 919d92facd2a87ef02d0766969a38681 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 8.6E-247 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CF65_02030 919d92facd2a87ef02d0766969a38681 643 Pfam PF02824 TGS domain 4 61 6.7E-10 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CF65_02030 919d92facd2a87ef02d0766969a38681 643 SUPERFAMILY SSF52954 529 639 2.27E-33 T 14-10-2018 CF65_02030 919d92facd2a87ef02d0766969a38681 643 Gene3D G3DSA:3.30.54.20 130 187 3.7E-61 T 14-10-2018 CF65_02030 919d92facd2a87ef02d0766969a38681 643 Gene3D G3DSA:3.30.980.10 69 222 3.7E-61 T 14-10-2018 CF65_02030 919d92facd2a87ef02d0766969a38681 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 1.1E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CF65_02030 919d92facd2a87ef02d0766969a38681 643 SMART SM00863 170 219 1.5E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CF65_02030 919d92facd2a87ef02d0766969a38681 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.535 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CF65_02459 77c32152e3456725d8b4a10e6d7be986 1032 SUPERFAMILY SSF46548 567 694 1.02E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CF65_02459 77c32152e3456725d8b4a10e6d7be986 1032 SUPERFAMILY SSF56176 16 287 5.72E-52 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CF65_02459 77c32152e3456725d8b4a10e6d7be986 1032 Pfam PF01565 FAD binding domain 54 195 2.6E-36 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CF65_02459 77c32152e3456725d8b4a10e6d7be986 1032 Pfam PF13183 4Fe-4S dicluster domain 580 690 4.1E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02459 77c32152e3456725d8b4a10e6d7be986 1032 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 676 687 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02459 77c32152e3456725d8b4a10e6d7be986 1032 Gene3D G3DSA:3.30.465.40 24 207 4.5E-47 T 14-10-2018 CF65_02459 77c32152e3456725d8b4a10e6d7be986 1032 Pfam PF02913 FAD linked oxidases, C-terminal domain 286 544 1.5E-59 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CF65_02459 77c32152e3456725d8b4a10e6d7be986 1032 SUPERFAMILY SSF55103 263 547 1.03E-50 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CF65_02121 1185b6dfb2edc59d0535f0cca9398e0e 165 Pfam PF00210 Ferritin-like domain 8 143 6.7E-39 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CF65_02121 1185b6dfb2edc59d0535f0cca9398e0e 165 SUPERFAMILY SSF47240 1 159 2.29E-57 T 14-10-2018 IPR009078 Ferritin-like superfamily CF65_02121 1185b6dfb2edc59d0535f0cca9398e0e 165 Gene3D G3DSA:1.20.1260.10 1 164 1.9E-50 T 14-10-2018 IPR012347 Ferritin-like CF65_01239 07eb9fc1edc29d7ecc2c142f34dc2b97 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01239 07eb9fc1edc29d7ecc2c142f34dc2b97 118 Gene3D G3DSA:1.10.8.50 1 71 9.5E-28 T 14-10-2018 CF65_01239 07eb9fc1edc29d7ecc2c142f34dc2b97 118 SUPERFAMILY SSF46946 2 114 4.71E-46 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CF65_01239 07eb9fc1edc29d7ecc2c142f34dc2b97 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.5E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01239 07eb9fc1edc29d7ecc2c142f34dc2b97 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.11 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01239 07eb9fc1edc29d7ecc2c142f34dc2b97 118 Gene3D G3DSA:4.10.910.10 72 118 8.0E-26 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01239 07eb9fc1edc29d7ecc2c142f34dc2b97 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.4E-53 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01239 07eb9fc1edc29d7ecc2c142f34dc2b97 118 PIRSF PIRSF002134 1 118 4.2E-42 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01999 85700ed48c1684834d6151a0c7d1ebca 323 Pfam PF03466 LysR substrate binding domain 91 290 3.7E-37 T 14-10-2018 IPR005119 LysR, substrate-binding CF65_01999 85700ed48c1684834d6151a0c7d1ebca 323 Gene3D G3DSA:3.40.190.10 167 266 1.0E-86 T 14-10-2018 CF65_01999 85700ed48c1684834d6151a0c7d1ebca 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01999 85700ed48c1684834d6151a0c7d1ebca 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01999 85700ed48c1684834d6151a0c7d1ebca 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01999 85700ed48c1684834d6151a0c7d1ebca 323 Gene3D G3DSA:3.40.190.10 93 302 1.0E-86 T 14-10-2018 CF65_01999 85700ed48c1684834d6151a0c7d1ebca 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 4.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01999 85700ed48c1684834d6151a0c7d1ebca 323 Gene3D G3DSA:1.10.10.10 1 86 3.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01999 85700ed48c1684834d6151a0c7d1ebca 323 SUPERFAMILY SSF46785 3 112 3.4E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_01999 85700ed48c1684834d6151a0c7d1ebca 323 SUPERFAMILY SSF53850 89 315 6.64E-40 T 14-10-2018 CF65_00072 4ccd96c742257ed9867e1b4425449cb2 147 Pfam PF04972 BON domain 20 84 6.5E-8 T 14-10-2018 IPR007055 BON domain CF65_00072 4ccd96c742257ed9867e1b4425449cb2 147 SMART SM00257 95 144 3.6E-11 T 14-10-2018 IPR018392 LysM domain CF65_00072 4ccd96c742257ed9867e1b4425449cb2 147 Pfam PF01476 LysM domain 96 144 1.0E-12 T 14-10-2018 IPR018392 LysM domain CF65_00072 4ccd96c742257ed9867e1b4425449cb2 147 Gene3D G3DSA:3.10.350.10 95 142 8.0E-15 T 14-10-2018 IPR036779 LysM domain superfamily CF65_00072 4ccd96c742257ed9867e1b4425449cb2 147 SUPERFAMILY SSF54106 94 144 3.01E-8 T 14-10-2018 CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 Gene3D G3DSA:3.10.350.10 443 487 2.0E-9 T 14-10-2018 IPR036779 LysM domain superfamily CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 SMART SM00646 91 249 2.5E-64 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 30 249 7.8E-46 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 Gene3D G3DSA:3.10.350.10 342 413 1.2E-12 T 14-10-2018 IPR036779 LysM domain superfamily CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 Gene3D G3DSA:3.10.350.10 267 341 2.0E-11 T 14-10-2018 IPR036779 LysM domain superfamily CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 SUPERFAMILY SSF54106 282 325 1.1E-7 T 14-10-2018 CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 SMART SM00257 355 398 1.9E-12 T 14-10-2018 IPR018392 LysM domain CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 SMART SM00257 282 325 2.0E-10 T 14-10-2018 IPR018392 LysM domain CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 SMART SM00257 444 488 6.6E-9 T 14-10-2018 IPR018392 LysM domain CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 Gene3D G3DSA:3.40.630.40 23 260 3.3E-66 T 14-10-2018 CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 SUPERFAMILY SSF54106 355 398 2.49E-8 T 14-10-2018 CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 Pfam PF01476 LysM domain 356 398 9.5E-10 T 14-10-2018 IPR018392 LysM domain CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 Pfam PF01476 LysM domain 283 325 1.8E-7 T 14-10-2018 IPR018392 LysM domain CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 Pfam PF01476 LysM domain 445 486 2.8E-8 T 14-10-2018 IPR018392 LysM domain CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 SUPERFAMILY SSF53187 28 251 1.26E-50 T 14-10-2018 CF65_01588 cc265c686c4aaf8cc595e2acd579b5ff 495 SUPERFAMILY SSF54106 443 487 7.59E-8 T 14-10-2018 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 SUPERFAMILY SSF54826 3 138 4.42E-56 T 14-10-2018 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 Hamap MF_00318 Enolase [eno]. 2 417 44.213 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 ProSitePatterns PS00164 Enolase signature. 340 353 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 SMART SM01192 143 434 7.3E-215 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 Pfam PF03952 Enolase, N-terminal domain 4 134 2.2E-57 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 Gene3D G3DSA:3.20.20.120 128 431 3.9E-131 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 Gene3D G3DSA:3.30.390.10 3 127 6.8E-54 T 14-10-2018 IPR029017 Enolase-like, N-terminal CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 PIRSF PIRSF001400 1 427 9.1E-192 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 421 2.1E-210 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 420 1.6E-136 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 SMART SM01193 4 134 4.6E-93 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 PRINTS PR00148 Enolase signature 340 354 4.1E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 PRINTS PR00148 Enolase signature 37 51 4.1E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 PRINTS PR00148 Enolase signature 107 123 4.1E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 PRINTS PR00148 Enolase signature 317 328 4.1E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 PRINTS PR00148 Enolase signature 369 386 4.1E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 PRINTS PR00148 Enolase signature 165 178 4.1E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CF65_01020 5fd91a4123c818dbb1e47fbc22d32dcf 436 SUPERFAMILY SSF51604 144 424 5.66E-125 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CF65_02290 fbf0db43fdae174a5f4112b3b307631d 209 SUPERFAMILY SSF53335 31 208 1.89E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02290 fbf0db43fdae174a5f4112b3b307631d 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 207 3.9E-95 T 14-10-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 CF65_02290 fbf0db43fdae174a5f4112b3b307631d 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.49 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 CF65_02290 fbf0db43fdae174a5f4112b3b307631d 209 Gene3D G3DSA:3.40.50.150 31 209 1.2E-59 T 14-10-2018 CF65_02290 fbf0db43fdae174a5f4112b3b307631d 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 3.1E-56 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CF65_02290 fbf0db43fdae174a5f4112b3b307631d 209 PIRSF PIRSF005461 2 209 2.3E-81 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 CF65_02676 f7dbdb5efe7440c2979e0d15131a2e5a 809 Pfam PF01568 Molydopterin dinucleotide binding domain 678 798 1.0E-17 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CF65_02676 f7dbdb5efe7440c2979e0d15131a2e5a 809 Gene3D G3DSA:3.40.228.10 546 626 6.3E-23 T 14-10-2018 CF65_02676 f7dbdb5efe7440c2979e0d15131a2e5a 809 SUPERFAMILY SSF50692 621 805 5.8E-43 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CF65_02676 f7dbdb5efe7440c2979e0d15131a2e5a 809 Gene3D G3DSA:3.40.50.740 289 471 7.0E-49 T 14-10-2018 CF65_02676 f7dbdb5efe7440c2979e0d15131a2e5a 809 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 714 741 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CF65_02676 f7dbdb5efe7440c2979e0d15131a2e5a 809 Gene3D G3DSA:3.40.228.10 1 271 1.4E-76 T 14-10-2018 CF65_02676 f7dbdb5efe7440c2979e0d15131a2e5a 809 SUPERFAMILY SSF53706 1 637 6.67E-222 T 14-10-2018 CF65_02676 f7dbdb5efe7440c2979e0d15131a2e5a 809 Gene3D G3DSA:2.40.40.20 627 805 1.2E-68 T 14-10-2018 CF65_02676 f7dbdb5efe7440c2979e0d15131a2e5a 809 Pfam PF00384 Molybdopterin oxidoreductase 2 374 2.3E-24 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02676 f7dbdb5efe7440c2979e0d15131a2e5a 809 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 804 0.0 T 14-10-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 CF65_00780 f117f72bc7c708ac3412e52dbf382fb4 257 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 38 251 38.93 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00780 f117f72bc7c708ac3412e52dbf382fb4 257 Gene3D G3DSA:1.10.3810.10 66 255 2.4E-53 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00780 f117f72bc7c708ac3412e52dbf382fb4 257 Pfam PF00912 Transglycosylase 78 243 1.7E-50 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00780 f117f72bc7c708ac3412e52dbf382fb4 257 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 38 249 3.0E-88 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00780 f117f72bc7c708ac3412e52dbf382fb4 257 SUPERFAMILY SSF53955 73 250 3.37E-60 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily CF65_02600 1edf4b8a4c15afe0fe4a5d5420617817 240 Pfam PF00814 Glycoprotease family 32 174 2.3E-32 T 14-10-2018 IPR000905 Gcp-like domain CF65_02600 1edf4b8a4c15afe0fe4a5d5420617817 240 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 6 228 1.1E-62 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CF65_02600 1edf4b8a4c15afe0fe4a5d5420617817 240 SUPERFAMILY SSF53067 6 107 3.88E-29 T 14-10-2018 CF65_02600 1edf4b8a4c15afe0fe4a5d5420617817 240 Gene3D G3DSA:3.30.420.40 6 228 3.4E-69 T 14-10-2018 CF65_02600 1edf4b8a4c15afe0fe4a5d5420617817 240 Gene3D G3DSA:3.30.420.40 97 197 3.4E-69 T 14-10-2018 CF65_02600 1edf4b8a4c15afe0fe4a5d5420617817 240 SUPERFAMILY SSF53067 112 226 9.32E-19 T 14-10-2018 CF65_02163 22edcda245e1771332ac9fd780f82975 98 Gene3D G3DSA:4.10.520.10 1 98 1.2E-35 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CF65_02163 22edcda245e1771332ac9fd780f82975 98 SMART SM00411 3 92 6.7E-39 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_02163 22edcda245e1771332ac9fd780f82975 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.9E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_02163 22edcda245e1771332ac9fd780f82975 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.9E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_02163 22edcda245e1771332ac9fd780f82975 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.9E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_02163 22edcda245e1771332ac9fd780f82975 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CF65_02163 22edcda245e1771332ac9fd780f82975 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 4.5E-43 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CF65_02163 22edcda245e1771332ac9fd780f82975 98 SUPERFAMILY SSF47729 3 93 8.83E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CF65_02163 22edcda245e1771332ac9fd780f82975 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.3E-29 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_02163 22edcda245e1771332ac9fd780f82975 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.543 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CF65_01244 f1781f605af96f9348e57e166a5d797d 89 SMART SM01321 1 68 0.008 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CF65_01244 f1781f605af96f9348e57e166a5d797d 89 SUPERFAMILY SSF143422 1 69 2.88E-21 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 CF65_01244 f1781f605af96f9348e57e166a5d797d 89 Pfam PF01797 Transposase IS200 like 1 68 1.3E-17 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CF65_01244 f1781f605af96f9348e57e166a5d797d 89 Gene3D G3DSA:3.30.70.1290 1 85 5.3E-22 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 CF65_02728 4e4ae5ba0cef0c75cef3546456355af8 446 Gene3D G3DSA:3.40.50.300 1 163 2.9E-48 T 14-10-2018 CF65_02728 4e4ae5ba0cef0c75cef3546456355af8 446 Gene3D G3DSA:1.10.3710.10 345 446 1.1E-35 T 14-10-2018 CF65_02728 4e4ae5ba0cef0c75cef3546456355af8 446 SUPERFAMILY SSF48019 251 433 2.44E-71 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CF65_02728 4e4ae5ba0cef0c75cef3546456355af8 446 Gene3D G3DSA:1.20.272.10 240 344 2.4E-43 T 14-10-2018 CF65_02728 4e4ae5ba0cef0c75cef3546456355af8 446 SMART SM00382 49 165 1.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02728 4e4ae5ba0cef0c75cef3546456355af8 446 Pfam PF12002 MgsA AAA+ ATPase C terminal 267 433 2.0E-64 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal CF65_02728 4e4ae5ba0cef0c75cef3546456355af8 446 SUPERFAMILY SSF52540 6 241 1.17E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02728 4e4ae5ba0cef0c75cef3546456355af8 446 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 163 1.2E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CF65_02728 4e4ae5ba0cef0c75cef3546456355af8 446 Gene3D G3DSA:1.10.8.60 165 239 2.9E-24 T 14-10-2018 CF65_02728 4e4ae5ba0cef0c75cef3546456355af8 446 Pfam PF16193 AAA C-terminal domain 189 266 4.2E-22 T 14-10-2018 IPR032423 AAA C-terminal domain CF65_02374 468a0d941a0cb86385494b491a5895b0 218 SUPERFAMILY SSF100950 1 147 5.86E-47 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_02374 468a0d941a0cb86385494b491a5895b0 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 6.1E-71 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CF65_02374 468a0d941a0cb86385494b491a5895b0 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 214 4.1E-59 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CF65_02374 468a0d941a0cb86385494b491a5895b0 218 SUPERFAMILY SSF75445 129 199 4.06E-23 T 14-10-2018 CF65_02374 468a0d941a0cb86385494b491a5895b0 218 Gene3D G3DSA:3.30.70.260 125 196 4.3E-81 T 14-10-2018 CF65_02374 468a0d941a0cb86385494b491a5895b0 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 218 34.434 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CF65_02374 468a0d941a0cb86385494b491a5895b0 218 Gene3D G3DSA:3.40.50.1360 7 210 4.3E-81 T 14-10-2018 CF65_01640 3036995951b40f9a4dbd9c93f2283ed1 510 Gene3D G3DSA:3.40.50.300 1 205 2.8E-84 T 14-10-2018 CF65_01640 3036995951b40f9a4dbd9c93f2283ed1 510 Gene3D G3DSA:1.20.58.2040 206 357 2.1E-75 T 14-10-2018 CF65_01640 3036995951b40f9a4dbd9c93f2283ed1 510 Gene3D G3DSA:1.10.10.2110 267 308 2.1E-75 T 14-10-2018 CF65_01640 3036995951b40f9a4dbd9c93f2283ed1 510 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 202 503 1.1E-67 T 14-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal CF65_01640 3036995951b40f9a4dbd9c93f2283ed1 510 ProDom PD047574 TYPE I RESTRICTION HYDROLASE DEOXYRIBONUCLEASE SITE-SPECIFIC HSDR ENZYME SYSTEM ENDONUCLEASE 309 344 6.0E-10 T 14-10-2018 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 383 2.8E-6 T 14-10-2018 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.8E-6 T 14-10-2018 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 Gene3D G3DSA:1.20.58.100 425 541 2.9E-35 T 14-10-2018 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 Gene3D G3DSA:3.90.700.10 237 364 5.5E-155 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 PIRSF PIRSF000171 1 575 2.0E-44 T 14-10-2018 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 Pfam PF02910 Fumarate reductase flavoprotein C-term 454 580 1.4E-42 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 Pfam PF00890 FAD binding domain 7 398 1.6E-110 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 SUPERFAMILY SSF51905 2 431 5.56E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 SUPERFAMILY SSF46977 445 597 8.76E-50 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 SUPERFAMILY SSF56425 227 359 9.87E-39 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 Gene3D G3DSA:4.10.80.40 542 576 1.2E-17 T 14-10-2018 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 580 2.4E-237 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 4 581 0.0 T 14-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.7E-10 T 14-10-2018 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 361 383 4.7E-10 T 14-10-2018 CF65_00804 660d5d27374c489c3bbe6ee60fd61c1f 602 Gene3D G3DSA:3.50.50.60 7 410 5.5E-155 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_00649 beb9a2e539a8a2f30e92a00c1b2cabd4 333 Gene3D G3DSA:3.30.160.20 183 270 2.7E-97 T 14-10-2018 CF65_00649 beb9a2e539a8a2f30e92a00c1b2cabd4 333 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 330 37.955 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CF65_00649 beb9a2e539a8a2f30e92a00c1b2cabd4 333 Pfam PF00472 RF-1 domain 189 294 8.0E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CF65_00649 beb9a2e539a8a2f30e92a00c1b2cabd4 333 Gene3D G3DSA:3.30.70.1660 84 315 2.7E-97 T 14-10-2018 CF65_00649 beb9a2e539a8a2f30e92a00c1b2cabd4 333 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 331 4.9E-166 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CF65_00649 beb9a2e539a8a2f30e92a00c1b2cabd4 333 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 201 217 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CF65_00649 beb9a2e539a8a2f30e92a00c1b2cabd4 333 SMART SM00937 36 151 7.2E-67 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 CF65_00649 beb9a2e539a8a2f30e92a00c1b2cabd4 333 Pfam PF03462 PCRF domain 2 176 5.0E-72 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 CF65_00649 beb9a2e539a8a2f30e92a00c1b2cabd4 333 SUPERFAMILY SSF75620 2 326 2.22E-135 T 14-10-2018 CF65_01324 11111485ad4e85ea6288abb3cd13941b 56 Gene3D G3DSA:2.20.28.120 1 56 7.6E-30 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01324 11111485ad4e85ea6288abb3cd13941b 56 SUPERFAMILY SSF57829 3 54 2.2E-20 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CF65_01324 11111485ad4e85ea6288abb3cd13941b 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.8E-28 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01324 11111485ad4e85ea6288abb3cd13941b 56 Pfam PF00471 Ribosomal protein L33 8 54 2.1E-19 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01324 11111485ad4e85ea6288abb3cd13941b 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01324 11111485ad4e85ea6288abb3cd13941b 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 15.615 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 Gene3D G3DSA:3.30.70.1430 64 817 5.4E-279 T 14-10-2018 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 SUPERFAMILY SSF82714 723 807 8.63E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 SUPERFAMILY SSF82866 806 1033 1.06E-45 T 14-10-2018 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 SUPERFAMILY SSF82693 65 154 1.1E-22 T 14-10-2018 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 Pfam PF00873 AcrB/AcrD/AcrF family 28 1033 2.8E-264 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 PRINTS PR00702 Acriflavin resistance protein family signature 34 58 5.1E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 PRINTS PR00702 Acriflavin resistance protein family signature 62 80 5.1E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 5.1E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 PRINTS PR00702 Acriflavin resistance protein family signature 379 400 5.1E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 PRINTS PR00702 Acriflavin resistance protein family signature 485 508 5.1E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 5.1E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 PRINTS PR00702 Acriflavin resistance protein family signature 407 431 5.1E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 5.1E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 5.1E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 SUPERFAMILY SSF82693 161 346 6.28E-19 T 14-10-2018 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 SUPERFAMILY SSF82714 205 286 1.05E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 Gene3D G3DSA:1.20.1640.10 524 1030 5.4E-279 T 14-10-2018 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 Gene3D G3DSA:1.20.1640.10 34 523 5.4E-279 T 14-10-2018 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 Gene3D G3DSA:3.30.70.1440 671 866 5.4E-279 T 14-10-2018 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 Gene3D G3DSA:3.30.70.1320 158 348 5.4E-279 T 14-10-2018 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 SUPERFAMILY SSF82866 314 512 1.83E-42 T 14-10-2018 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 Gene3D G3DSA:3.30.2090.10 721 809 5.4E-279 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 Gene3D G3DSA:3.30.2090.10 201 291 5.4E-279 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 Gene3D G3DSA:3.30.70.1430 578 670 5.4E-279 T 14-10-2018 CF65_01341 1d206b8fa3c6fb6e17c0cc361dfd9ab3 1056 SUPERFAMILY SSF82693 576 671 1.99E-18 T 14-10-2018 CF65_00446 5549e7d3fd3a77b0c9727632eb0518e1 639 Pfam PF09299 Mu transposase, C-terminal 466 527 1.9E-11 T 14-10-2018 IPR015378 Transposase-like, Mu, C-terminal CF65_00446 5549e7d3fd3a77b0c9727632eb0518e1 639 Pfam PF00665 Integrase core domain 244 380 9.3E-17 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CF65_00446 5549e7d3fd3a77b0c9727632eb0518e1 639 Gene3D G3DSA:1.10.10.60 160 222 3.0E-6 T 14-10-2018 CF65_00446 5549e7d3fd3a77b0c9727632eb0518e1 639 Pfam PF13518 Helix-turn-helix domain 94 150 8.7E-13 T 14-10-2018 CF65_00446 5549e7d3fd3a77b0c9727632eb0518e1 639 Pfam PF09039 Mu DNA binding, I gamma subdomain 160 221 6.2E-5 T 14-10-2018 IPR015126 Mu DNA binding, I gamma subdomain CF65_00446 5549e7d3fd3a77b0c9727632eb0518e1 639 Gene3D G3DSA:3.30.420.10 243 444 1.1E-33 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CF65_00446 5549e7d3fd3a77b0c9727632eb0518e1 639 SUPERFAMILY SSF53098 239 437 4.4E-26 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_00865 a502c0b47139fa474d450fa4c5546101 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site CF65_00865 a502c0b47139fa474d450fa4c5546101 154 SUPERFAMILY SSF55486 3 150 1.25E-47 T 14-10-2018 CF65_00865 a502c0b47139fa474d450fa4c5546101 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 143 1.8E-35 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CF65_00865 a502c0b47139fa474d450fa4c5546101 154 Gene3D G3DSA:3.40.390.30 1 154 6.2E-57 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 CF65_00865 a502c0b47139fa474d450fa4c5546101 154 Pfam PF02130 Uncharacterized protein family UPF0054 22 141 6.0E-37 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CF65_00865 a502c0b47139fa474d450fa4c5546101 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 23.462 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CF65_01215 411fba24ca2059a2db0e3aa50ef640c0 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 263 277 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CF65_01215 411fba24ca2059a2db0e3aa50ef640c0 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 4.0E-24 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CF65_01215 411fba24ca2059a2db0e3aa50ef640c0 370 SMART SM00859 3 123 5.9E-26 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CF65_01215 411fba24ca2059a2db0e3aa50ef640c0 370 Gene3D G3DSA:3.30.360.10 136 352 2.9E-149 T 14-10-2018 CF65_01215 411fba24ca2059a2db0e3aa50ef640c0 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 355 1.4E-58 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CF65_01215 411fba24ca2059a2db0e3aa50ef640c0 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 369 34.461 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CF65_01215 411fba24ca2059a2db0e3aa50ef640c0 370 Gene3D G3DSA:3.40.50.720 4 359 2.9E-149 T 14-10-2018 CF65_01215 411fba24ca2059a2db0e3aa50ef640c0 370 SUPERFAMILY SSF51735 1 148 2.76E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01215 411fba24ca2059a2db0e3aa50ef640c0 370 SUPERFAMILY SSF55347 135 356 7.48E-78 T 14-10-2018 CF65_01215 411fba24ca2059a2db0e3aa50ef640c0 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 369 3.3E-192 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CF65_01215 411fba24ca2059a2db0e3aa50ef640c0 370 PIRSF PIRSF000148 1 370 2.0E-70 T 14-10-2018 CF65_00920 9099569673c3dbd6121d17536f82e3ed 186 SUPERFAMILY SSF48150 3 183 1.52E-79 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CF65_00920 9099569673c3dbd6121d17536f82e3ed 186 Gene3D G3DSA:1.10.340.30 2 185 4.2E-85 T 14-10-2018 CF65_00920 9099569673c3dbd6121d17536f82e3ed 186 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 3 181 8.5E-80 T 14-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 CF65_00920 9099569673c3dbd6121d17536f82e3ed 186 Pfam PF03352 Methyladenine glycosylase 7 181 4.5E-77 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CF65_00854 d9b34c19c0892836bbe07b2b1d645a4b 227 Gene3D G3DSA:1.10.3720.10 1 217 6.5E-42 T 14-10-2018 IPR035906 MetI-like superfamily CF65_00854 d9b34c19c0892836bbe07b2b1d645a4b 227 SUPERFAMILY SSF161098 8 202 2.49E-31 T 14-10-2018 IPR035906 MetI-like superfamily CF65_00854 d9b34c19c0892836bbe07b2b1d645a4b 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 212 2.6E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_00854 d9b34c19c0892836bbe07b2b1d645a4b 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 111 2.1E-13 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CF65_00657 e555344142aa793925562c6b76e8b105 633 Gene3D G3DSA:1.20.1270.10 524 606 8.1E-28 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 PRINTS PR00301 70kDa heat shock protein signature 469 485 4.4E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 PRINTS PR00301 70kDa heat shock protein signature 138 158 4.4E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 PRINTS PR00301 70kDa heat shock protein signature 334 350 4.4E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.4E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.4E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 PRINTS PR00301 70kDa heat shock protein signature 388 407 4.4E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 PRINTS PR00301 70kDa heat shock protein signature 54 62 4.4E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 PRINTS PR00301 70kDa heat shock protein signature 198 208 4.4E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 PRINTS PR00301 70kDa heat shock protein signature 365 385 4.4E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 Gene3D G3DSA:3.90.640.10 229 316 1.5E-170 T 14-10-2018 CF65_00657 e555344142aa793925562c6b76e8b105 633 Pfam PF00012 Hsp70 protein 4 601 1.2E-267 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 SUPERFAMILY SSF53067 4 183 1.23E-65 T 14-10-2018 CF65_00657 e555344142aa793925562c6b76e8b105 633 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 SUPERFAMILY SSF100934 534 608 1.14E-6 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 Gene3D G3DSA:3.30.420.40 180 366 1.5E-170 T 14-10-2018 CF65_00657 e555344142aa793925562c6b76e8b105 633 SUPERFAMILY SSF53067 187 382 4.01E-68 T 14-10-2018 CF65_00657 e555344142aa793925562c6b76e8b105 633 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 629 37.159 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 CF65_00657 e555344142aa793925562c6b76e8b105 633 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 Gene3D G3DSA:2.60.34.10 383 523 1.4E-66 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 3.6E-294 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 CF65_00657 e555344142aa793925562c6b76e8b105 633 Gene3D G3DSA:3.30.420.40 5 379 1.5E-170 T 14-10-2018 CF65_00657 e555344142aa793925562c6b76e8b105 633 SUPERFAMILY SSF100920 384 540 1.01E-61 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CF65_00657 e555344142aa793925562c6b76e8b105 633 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CF65_00950 e477d0c02f0caed75f9b01768c09500c 191 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 2 167 6.4E-54 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 CF65_00950 e477d0c02f0caed75f9b01768c09500c 191 Hamap MF_02088 Probable queuosine precursor transporter. 1 175 13.339 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 CF65_00950 e477d0c02f0caed75f9b01768c09500c 191 Pfam PF02592 Putative vitamin uptake transporter 5 162 2.0E-36 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 CF65_01152 1d620fa6f2a10f7eb45696df5496ddd3 254 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 4.2E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CF65_01152 1d620fa6f2a10f7eb45696df5496ddd3 254 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 4.2E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CF65_01152 1d620fa6f2a10f7eb45696df5496ddd3 254 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 4.2E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CF65_01152 1d620fa6f2a10f7eb45696df5496ddd3 254 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 4.2E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CF65_01152 1d620fa6f2a10f7eb45696df5496ddd3 254 ProSitePatterns PS01218 TatC family signature. 155 174 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site CF65_01152 1d620fa6f2a10f7eb45696df5496ddd3 254 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 2.7E-67 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CF65_01152 1d620fa6f2a10f7eb45696df5496ddd3 254 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 8 240 16.0 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CF65_01152 1d620fa6f2a10f7eb45696df5496ddd3 254 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 1.4E-78 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CF65_00902 39a7abdde9001bafb7b6da8ce7251b1e 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 9.9E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CF65_00902 39a7abdde9001bafb7b6da8ce7251b1e 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 189 1.3E-93 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CF65_00902 39a7abdde9001bafb7b6da8ce7251b1e 191 Pfam PF08281 Sigma-70, region 4 134 179 7.6E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CF65_00902 39a7abdde9001bafb7b6da8ce7251b1e 191 Gene3D G3DSA:1.10.10.10 121 191 1.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00902 39a7abdde9001bafb7b6da8ce7251b1e 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CF65_00902 39a7abdde9001bafb7b6da8ce7251b1e 191 SUPERFAMILY SSF88659 122 183 4.11E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CF65_00902 39a7abdde9001bafb7b6da8ce7251b1e 191 Gene3D G3DSA:1.10.1740.10 1 120 1.2E-43 T 14-10-2018 CF65_00902 39a7abdde9001bafb7b6da8ce7251b1e 191 Pfam PF04542 Sigma-70 region 2 25 91 2.2E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CF65_00902 39a7abdde9001bafb7b6da8ce7251b1e 191 SUPERFAMILY SSF88946 2 105 3.3E-30 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CF65_02749 82159133228dfe5abecfdb2826e28b19 381 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.242 T 14-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 CF65_02749 82159133228dfe5abecfdb2826e28b19 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 CF65_02749 82159133228dfe5abecfdb2826e28b19 381 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.3E-121 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 CF65_02749 82159133228dfe5abecfdb2826e28b19 381 SUPERFAMILY SSF51395 5 376 1.1E-93 T 14-10-2018 CF65_02749 82159133228dfe5abecfdb2826e28b19 381 PIRSF PIRSF000138 1 380 4.2E-118 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 CF65_02749 82159133228dfe5abecfdb2826e28b19 381 Gene3D G3DSA:3.20.20.70 2 380 1.1E-121 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_00110 ca38f0bd9cfec41b537321fea56e35df 225 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 1 223 2.0E-85 T 14-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CF65_00110 ca38f0bd9cfec41b537321fea56e35df 225 SUPERFAMILY SSF52540 10 203 7.55E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00110 ca38f0bd9cfec41b537321fea56e35df 225 SMART SM00382 34 150 0.0063 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00110 ca38f0bd9cfec41b537321fea56e35df 225 Gene3D G3DSA:1.10.8.60 159 225 3.3E-28 T 14-10-2018 CF65_00110 ca38f0bd9cfec41b537321fea56e35df 225 Gene3D G3DSA:3.40.50.300 1 156 3.9E-36 T 14-10-2018 CF65_00110 ca38f0bd9cfec41b537321fea56e35df 225 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 35 55 2.3E-6 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CF65_00110 ca38f0bd9cfec41b537321fea56e35df 225 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 123 150 2.3E-6 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CF65_00110 ca38f0bd9cfec41b537321fea56e35df 225 Pfam PF00308 Bacterial dnaA protein 12 205 8.8E-22 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 SUPERFAMILY SSF88659 512 614 3.71E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 Gene3D G3DSA:1.10.10.10 455 531 8.7E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 615 45.039 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 378 603 7.4E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 Pfam PF04545 Sigma-70, region 4 550 603 3.0E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 Gene3D G3DSA:1.10.220.120 1 64 2.1E-28 T 14-10-2018 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 3.1E-27 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 PRINTS PR00046 Major sigma-70 factor signature 406 419 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 PRINTS PR00046 Major sigma-70 factor signature 575 590 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 PRINTS PR00046 Major sigma-70 factor signature 430 438 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 PRINTS PR00046 Major sigma-70 factor signature 590 601 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 PRINTS PR00046 Major sigma-70 factor signature 554 566 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 Pfam PF04542 Sigma-70 region 2 382 451 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 Pfam PF04546 Sigma-70, non-essential region 137 351 4.0E-63 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 Pfam PF04539 Sigma-70 region 3 461 536 3.3E-29 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 3.9E-13 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 Gene3D G3DSA:1.10.601.10 111 451 2.9E-130 T 14-10-2018 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 SUPERFAMILY SSF88946 113 449 2.02E-93 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 575 601 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 406 419 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 Gene3D G3DSA:1.10.10.10 532 616 3.4E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 SUPERFAMILY SSF88659 455 528 4.11E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CF65_02397 5e902fdac8c92b56a9d2637319d355d7 616 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 378 614 3.1E-121 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CF65_02303 9f0cb9fe4223532b9e2a78775f791a7f 693 Gene3D G3DSA:3.40.50.300 208 450 6.4E-83 T 14-10-2018 CF65_02303 9f0cb9fe4223532b9e2a78775f791a7f 693 Gene3D G3DSA:3.40.50.300 457 630 3.0E-51 T 14-10-2018 CF65_02303 9f0cb9fe4223532b9e2a78775f791a7f 693 Pfam PF00270 DEAD/DEAH box helicase 293 431 3.4E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CF65_02303 9f0cb9fe4223532b9e2a78775f791a7f 693 SMART SM00490 505 589 7.7E-22 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_02303 9f0cb9fe4223532b9e2a78775f791a7f 693 Pfam PF00271 Helicase conserved C-terminal domain 478 588 3.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_02303 9f0cb9fe4223532b9e2a78775f791a7f 693 SUPERFAMILY SSF52540 292 653 2.35E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02303 9f0cb9fe4223532b9e2a78775f791a7f 693 SUPERFAMILY SSF50249 9 172 3.77E-41 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02303 9f0cb9fe4223532b9e2a78775f791a7f 693 SMART SM00487 265 459 7.9E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_02303 9f0cb9fe4223532b9e2a78775f791a7f 693 Gene3D G3DSA:2.40.50.140 47 141 1.2E-15 T 14-10-2018 CF65_02303 9f0cb9fe4223532b9e2a78775f791a7f 693 SUPERFAMILY SSF52540 189 453 5.24E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02303 9f0cb9fe4223532b9e2a78775f791a7f 693 Pfam PF17191 RecG wedge domain 14 171 5.1E-23 T 14-10-2018 IPR033454 RecG, wedge domain CF65_02303 9f0cb9fe4223532b9e2a78775f791a7f 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 662 8.6E-244 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CF65_02931 8cf00270e0ae24395605494deb93f541 457 SUPERFAMILY SSF51984 4 93 2.75E-22 T 14-10-2018 CF65_02931 8cf00270e0ae24395605494deb93f541 457 Gene3D G3DSA:3.40.1190.10 96 312 2.3E-55 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CF65_02931 8cf00270e0ae24395605494deb93f541 457 Pfam PF08245 Mur ligase middle domain 111 294 1.9E-20 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CF65_02931 8cf00270e0ae24395605494deb93f541 457 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 4 453 57.148 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 CF65_02931 8cf00270e0ae24395605494deb93f541 457 SUPERFAMILY SSF53623 97 311 5.89E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CF65_02931 8cf00270e0ae24395605494deb93f541 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 389 2.9E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CF65_02931 8cf00270e0ae24395605494deb93f541 457 Gene3D G3DSA:3.40.50.720 1 93 3.9E-34 T 14-10-2018 CF65_02931 8cf00270e0ae24395605494deb93f541 457 SUPERFAMILY SSF53244 314 452 1.57E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CF65_02931 8cf00270e0ae24395605494deb93f541 457 Pfam PF01225 Mur ligase family, catalytic domain 5 103 3.1E-17 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CF65_02931 8cf00270e0ae24395605494deb93f541 457 Gene3D G3DSA:3.90.190.20 317 454 9.7E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CF65_02931 8cf00270e0ae24395605494deb93f541 457 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 5 453 2.0E-249 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 CF65_00700 4a209a1cf0feca7381c6df7268c7c32b 348 Gene3D G3DSA:2.40.50.140 282 318 1.1E-7 T 14-10-2018 CF65_00700 4a209a1cf0feca7381c6df7268c7c32b 348 Pfam PF00005 ABC transporter 22 163 9.6E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_00700 4a209a1cf0feca7381c6df7268c7c32b 348 Gene3D G3DSA:3.40.50.300 6 224 3.3E-68 T 14-10-2018 CF65_00700 4a209a1cf0feca7381c6df7268c7c32b 348 SMART SM00382 30 213 2.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00700 4a209a1cf0feca7381c6df7268c7c32b 348 SUPERFAMILY SSF50331 241 345 7.78E-12 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CF65_00700 4a209a1cf0feca7381c6df7268c7c32b 348 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_00700 4a209a1cf0feca7381c6df7268c7c32b 348 SUPERFAMILY SSF52540 6 244 8.44E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00700 4a209a1cf0feca7381c6df7268c7c32b 348 Gene3D G3DSA:2.40.50.940 225 281 1.1E-7 T 14-10-2018 CF65_00700 4a209a1cf0feca7381c6df7268c7c32b 348 Pfam PF08402 TOBE domain 275 324 9.4E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 CF65_00637 a9a81f60c2ee8bdf1e60f61552de5d4e 142 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 55 5.9E-5 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_00637 a9a81f60c2ee8bdf1e60f61552de5d4e 142 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 2 126 3.9E-37 T 14-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 CF65_00637 a9a81f60c2ee8bdf1e60f61552de5d4e 142 SUPERFAMILY SSF53254 4 129 4.5E-15 T 14-10-2018 IPR029033 Histidine phosphatase superfamily CF65_00637 a9a81f60c2ee8bdf1e60f61552de5d4e 142 Gene3D G3DSA:3.40.50.1240 2 137 5.1E-23 T 14-10-2018 IPR029033 Histidine phosphatase superfamily CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 SMART SM00419 153 201 5.7E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 ProSitePatterns PS00042 Crp-type HTH domain signature. 161 184 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 Pfam PF00325 Bacterial regulatory proteins, crp family 159 190 2.7E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 SMART SM00100 1 115 4.6E-23 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 64 82 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 23 39 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 SUPERFAMILY SSF51206 3 130 6.42E-34 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 Gene3D G3DSA:1.10.10.10 132 200 6.8E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 SUPERFAMILY SSF46785 132 200 6.07E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 Pfam PF00027 Cyclic nucleotide-binding domain 16 102 3.1E-22 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 Gene3D G3DSA:2.60.120.10 3 131 2.6E-42 T 14-10-2018 IPR014710 RmlC-like jelly roll fold CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 175 190 2.3E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CF65_01308 91edf0bdbda833a03c2a9836700e187a 203 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 159 175 2.3E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CF65_02010 9547e6b3c927d7a50b96555d4d3e95c1 160 Pfam PF08534 Redoxin 22 144 2.5E-11 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CF65_02010 9547e6b3c927d7a50b96555d4d3e95c1 160 SUPERFAMILY SSF52833 26 157 4.26E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_02010 9547e6b3c927d7a50b96555d4d3e95c1 160 Gene3D G3DSA:3.40.30.10 10 160 5.2E-31 T 14-10-2018 CF65_01107 deaffa4af433a4877e5ea58a0bed8a12 455 Gene3D G3DSA:1.10.275.10 1 117 2.2E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal CF65_01107 deaffa4af433a4877e5ea58a0bed8a12 455 Gene3D G3DSA:1.10.40.30 382 445 2.3E-154 T 14-10-2018 CF65_01107 deaffa4af433a4877e5ea58a0bed8a12 455 SUPERFAMILY SSF48557 10 453 1.52E-104 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 CF65_01107 deaffa4af433a4877e5ea58a0bed8a12 455 Gene3D G3DSA:1.20.200.10 118 446 2.3E-154 T 14-10-2018 CF65_01107 deaffa4af433a4877e5ea58a0bed8a12 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 8.0E-147 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CF65_01107 deaffa4af433a4877e5ea58a0bed8a12 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CF65_01107 deaffa4af433a4877e5ea58a0bed8a12 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 9.8E-52 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 CF65_01107 deaffa4af433a4877e5ea58a0bed8a12 455 Pfam PF00206 Lyase 14 312 2.7E-70 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal CF65_01107 deaffa4af433a4877e5ea58a0bed8a12 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.4E-16 T 14-10-2018 IPR000362 Fumarate lyase family CF65_01107 deaffa4af433a4877e5ea58a0bed8a12 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.4E-16 T 14-10-2018 IPR000362 Fumarate lyase family CF65_01107 deaffa4af433a4877e5ea58a0bed8a12 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 5.4E-16 T 14-10-2018 IPR000362 Fumarate lyase family CF65_01107 deaffa4af433a4877e5ea58a0bed8a12 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 5.4E-16 T 14-10-2018 IPR000362 Fumarate lyase family CF65_01182 af08576ebc243452a10fc654e4bebb02 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 247 342 1.5E-21 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CF65_01182 af08576ebc243452a10fc654e4bebb02 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site CF65_01182 af08576ebc243452a10fc654e4bebb02 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 99 237 5.9E-22 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CF65_01182 af08576ebc243452a10fc654e4bebb02 407 Gene3D G3DSA:3.40.47.10 10 243 8.4E-32 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_01182 af08576ebc243452a10fc654e4bebb02 407 SMART SM00825 Beta-ketoacyl synthase 53 405 6.1E-8 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CF65_01182 af08576ebc243452a10fc654e4bebb02 407 SUPERFAMILY SSF53901 211 404 1.51E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_01182 af08576ebc243452a10fc654e4bebb02 407 Gene3D G3DSA:3.40.47.10 250 401 8.7E-37 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_01182 af08576ebc243452a10fc654e4bebb02 407 SUPERFAMILY SSF53901 10 237 7.77E-36 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_02561 7f46894896801dbc1de00936a3d84c6e 168 Pfam PF01713 Smr domain 92 165 1.2E-16 T 14-10-2018 IPR002625 Smr domain CF65_02561 7f46894896801dbc1de00936a3d84c6e 168 SMART SM00463 89 167 3.3E-18 T 14-10-2018 IPR002625 Smr domain CF65_02561 7f46894896801dbc1de00936a3d84c6e 168 SUPERFAMILY SSF160443 90 162 7.98E-11 T 14-10-2018 IPR036063 Smr domain superfamily CF65_02561 7f46894896801dbc1de00936a3d84c6e 168 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 168 38.419 T 14-10-2018 IPR022990 Uncharacterised protein family UPF0115 CF65_02561 7f46894896801dbc1de00936a3d84c6e 168 Gene3D G3DSA:3.30.1370.110 44 168 9.5E-24 T 14-10-2018 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 Gene3D G3DSA:3.30.360.10 149 314 5.2E-151 T 14-10-2018 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 PIRSF PIRSF000149 1 333 6.1E-132 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 8.4E-69 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.0E-39 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 SUPERFAMILY SSF51735 3 166 2.04E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02309 9ae9d248f554aa3047b459e98f528087 334 Gene3D G3DSA:3.40.50.720 4 326 5.2E-151 T 14-10-2018 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 SMART SM00846 3 150 6.0E-95 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 SUPERFAMILY SSF55347 149 312 5.36E-78 T 14-10-2018 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 8.5E-134 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 6.6E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 6.6E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 6.6E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 6.6E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_02309 9ae9d248f554aa3047b459e98f528087 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 6.6E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_02090 09e641ea66359d2a643a1f95c8c249a4 436 Pfam PF00483 Nucleotidyl transferase 21 288 2.6E-63 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CF65_02090 09e641ea66359d2a643a1f95c8c249a4 436 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 19 395 8.2E-156 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CF65_02090 09e641ea66359d2a643a1f95c8c249a4 436 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 15 422 50.558 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CF65_02090 09e641ea66359d2a643a1f95c8c249a4 436 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 24 43 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CF65_02090 09e641ea66359d2a643a1f95c8c249a4 436 SUPERFAMILY SSF51161 323 408 2.08E-17 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily CF65_02090 09e641ea66359d2a643a1f95c8c249a4 436 SUPERFAMILY SSF53448 17 375 3.05E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02090 09e641ea66359d2a643a1f95c8c249a4 436 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 210 220 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CF65_02090 09e641ea66359d2a643a1f95c8c249a4 436 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 111 119 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CF65_02090 09e641ea66359d2a643a1f95c8c249a4 436 Gene3D G3DSA:2.160.10.10 300 426 1.9E-32 T 14-10-2018 CF65_02090 09e641ea66359d2a643a1f95c8c249a4 436 Gene3D G3DSA:3.90.550.10 6 299 6.9E-87 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02562 de931465f7514d6ba9ac2bee10384b66 316 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 16 310 50.221 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CF65_02562 de931465f7514d6ba9ac2bee10384b66 316 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 25 312 3.5E-92 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CF65_02562 de931465f7514d6ba9ac2bee10384b66 316 Gene3D G3DSA:1.10.8.10 25 112 4.5E-5 T 14-10-2018 CF65_02562 de931465f7514d6ba9ac2bee10384b66 316 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 23 304 6.9E-130 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CF65_02562 de931465f7514d6ba9ac2bee10384b66 316 PIRSF PIRSF037167 7 316 3.2E-143 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CF65_02562 de931465f7514d6ba9ac2bee10384b66 316 Pfam PF05175 Methyltransferase small domain 139 224 3.9E-16 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CF65_02562 de931465f7514d6ba9ac2bee10384b66 316 SUPERFAMILY SSF53335 26 301 1.78E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02562 de931465f7514d6ba9ac2bee10384b66 316 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 214 220 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CF65_02562 de931465f7514d6ba9ac2bee10384b66 316 Gene3D G3DSA:3.40.50.150 113 289 2.6E-45 T 14-10-2018 CF65_02190 2072c1332697cb27769bd2487d2f8c64 91 Gene3D G3DSA:2.40.50.970 1 83 1.0E-25 T 14-10-2018 IPR037254 HupF/HypC superfamily CF65_02190 2072c1332697cb27769bd2487d2f8c64 91 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 14-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site CF65_02190 2072c1332697cb27769bd2487d2f8c64 91 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 82 7.0E-28 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CF65_02190 2072c1332697cb27769bd2487d2f8c64 91 Pfam PF01455 HupF/HypC family 1 72 2.1E-27 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CF65_02190 2072c1332697cb27769bd2487d2f8c64 91 SUPERFAMILY SSF159127 1 85 3.01E-26 T 14-10-2018 IPR037254 HupF/HypC superfamily CF65_02190 2072c1332697cb27769bd2487d2f8c64 91 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 3.1E-21 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CF65_02190 2072c1332697cb27769bd2487d2f8c64 91 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 3.1E-21 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CF65_02190 2072c1332697cb27769bd2487d2f8c64 91 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 3.1E-21 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CF65_02190 2072c1332697cb27769bd2487d2f8c64 91 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 3.1E-21 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CF65_01367 31b22575ab7de40e4d5bd7ce2d892100 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 117.637 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CF65_01367 31b22575ab7de40e4d5bd7ce2d892100 249 SUPERFAMILY SSF75217 1 245 7.85E-103 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases CF65_01367 31b22575ab7de40e4d5bd7ce2d892100 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.8E-69 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CF65_01367 31b22575ab7de40e4d5bd7ce2d892100 249 Gene3D G3DSA:1.10.1270.20 166 248 3.2E-36 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CF65_01367 31b22575ab7de40e4d5bd7ce2d892100 249 PIRSF PIRSF000386 1 248 9.8E-103 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CF65_01367 31b22575ab7de40e4d5bd7ce2d892100 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 1.8E-110 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CF65_01367 31b22575ab7de40e4d5bd7ce2d892100 249 Gene3D G3DSA:3.40.1280.10 1 165 9.4E-68 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_00775 d99442def949f885bb100219f5971d5c 156 Gene3D G3DSA:3.10.129.10 5 154 2.0E-48 T 14-10-2018 CF65_00775 d99442def949f885bb100219f5971d5c 156 SUPERFAMILY SSF54637 14 142 3.52E-41 T 14-10-2018 IPR029069 HotDog domain superfamily CF65_00775 d99442def949f885bb100219f5971d5c 156 Pfam PF03061 Thioesterase superfamily 31 102 2.9E-20 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CF65_01203 51ccc19552a77b8b8b7b62be9e0afbd8 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 272 9.0E-105 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CF65_01203 51ccc19552a77b8b8b7b62be9e0afbd8 274 Gene3D G3DSA:3.10.310.10 115 261 1.1E-107 T 14-10-2018 CF65_01203 51ccc19552a77b8b8b7b62be9e0afbd8 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.654 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CF65_01203 51ccc19552a77b8b8b7b62be9e0afbd8 274 Gene3D G3DSA:3.10.310.10 3 269 1.1E-107 T 14-10-2018 CF65_01203 51ccc19552a77b8b8b7b62be9e0afbd8 274 Pfam PF01678 Diaminopimelate epimerase 152 267 8.9E-34 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CF65_01203 51ccc19552a77b8b8b7b62be9e0afbd8 274 Pfam PF01678 Diaminopimelate epimerase 3 122 1.5E-34 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CF65_01203 51ccc19552a77b8b8b7b62be9e0afbd8 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CF65_01203 51ccc19552a77b8b8b7b62be9e0afbd8 274 SUPERFAMILY SSF54506 2 270 1.22E-58 T 14-10-2018 CF65_02446 c4c383ce3ab4019d42bfa2079daf9a6f 221 Gene3D G3DSA:1.10.150.240 16 86 6.7E-47 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CF65_02446 c4c383ce3ab4019d42bfa2079daf9a6f 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 189 1.3E-30 T 14-10-2018 CF65_02446 c4c383ce3ab4019d42bfa2079daf9a6f 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 110 189 2.9E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_02446 c4c383ce3ab4019d42bfa2079daf9a6f 221 Gene3D G3DSA:3.40.50.1000 4 191 6.7E-47 T 14-10-2018 IPR023214 HAD superfamily CF65_02446 c4c383ce3ab4019d42bfa2079daf9a6f 221 SUPERFAMILY SSF56784 1 218 6.1E-43 T 14-10-2018 IPR036412 HAD-like superfamily CF65_02446 c4c383ce3ab4019d42bfa2079daf9a6f 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 9.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_02446 c4c383ce3ab4019d42bfa2079daf9a6f 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 179 192 9.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_02446 c4c383ce3ab4019d42bfa2079daf9a6f 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 9.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_02446 c4c383ce3ab4019d42bfa2079daf9a6f 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 9.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_02446 c4c383ce3ab4019d42bfa2079daf9a6f 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 103 116 9.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_02184 5e5c1a811cdef98c844f69ea3f526ff0 219 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 18 216 4.2E-63 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CF65_02184 5e5c1a811cdef98c844f69ea3f526ff0 219 Gene3D G3DSA:3.20.20.70 17 215 3.8E-70 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02184 5e5c1a811cdef98c844f69ea3f526ff0 219 Gene3D G3DSA:3.20.20.70 1 16 3.8E-70 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02184 5e5c1a811cdef98c844f69ea3f526ff0 219 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 16 219 32.255 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CF65_02184 5e5c1a811cdef98c844f69ea3f526ff0 219 SUPERFAMILY SSF51366 18 217 2.04E-60 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CF65_00823 ec979d684588301ea49f4f831be02bee 626 SUPERFAMILY SSF54211 233 488 6.45E-101 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00823 ec979d684588301ea49f4f831be02bee 626 PIRSF PIRSF002583 1 626 7.1E-217 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CF65_00823 ec979d684588301ea49f4f831be02bee 626 SUPERFAMILY SSF110942 514 625 5.23E-35 T 14-10-2018 IPR037196 HSP90, C-terminal domain CF65_00823 ec979d684588301ea49f4f831be02bee 626 Gene3D G3DSA:3.30.230.80 232 404 4.5E-71 T 14-10-2018 CF65_00823 ec979d684588301ea49f4f831be02bee 626 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 26 35 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 CF65_00823 ec979d684588301ea49f4f831be02bee 626 SMART SM00387 28 185 2.5E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00823 ec979d684588301ea49f4f831be02bee 626 Gene3D G3DSA:3.30.565.10 2 216 7.7E-78 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00823 ec979d684588301ea49f4f831be02bee 626 SUPERFAMILY SSF55874 5 216 4.06E-66 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00823 ec979d684588301ea49f4f831be02bee 626 Gene3D G3DSA:1.20.120.790 503 626 7.7E-44 T 14-10-2018 IPR037196 HSP90, C-terminal domain CF65_00823 ec979d684588301ea49f4f831be02bee 626 Pfam PF00183 Hsp90 protein 220 625 4.7E-125 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CF65_00823 ec979d684588301ea49f4f831be02bee 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 183 2.1E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00823 ec979d684588301ea49f4f831be02bee 626 PRINTS PR00775 90kDa heat shock protein signature 121 143 7.4E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CF65_00823 ec979d684588301ea49f4f831be02bee 626 PRINTS PR00775 90kDa heat shock protein signature 76 93 7.4E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CF65_00823 ec979d684588301ea49f4f831be02bee 626 PRINTS PR00775 90kDa heat shock protein signature 191 209 7.4E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CF65_00823 ec979d684588301ea49f4f831be02bee 626 PRINTS PR00775 90kDa heat shock protein signature 27 49 7.4E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CF65_00823 ec979d684588301ea49f4f831be02bee 626 PRINTS PR00775 90kDa heat shock protein signature 6 26 7.4E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CF65_00823 ec979d684588301ea49f4f831be02bee 626 PRINTS PR00775 90kDa heat shock protein signature 173 190 7.4E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CF65_00823 ec979d684588301ea49f4f831be02bee 626 PRINTS PR00775 90kDa heat shock protein signature 94 111 7.4E-65 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CF65_00823 ec979d684588301ea49f4f831be02bee 626 Gene3D G3DSA:3.40.50.11260 405 497 1.4E-35 T 14-10-2018 CF65_00823 ec979d684588301ea49f4f831be02bee 626 Hamap MF_00505 Chaperone protein HtpG [htpG]. 3 626 32.78 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 SUPERFAMILY SSF55307 226 344 2.24E-35 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 SMART SM00864 16 227 2.4E-101 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 420 36.212 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 Gene3D G3DSA:3.30.1330.20 243 351 6.8E-28 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 Gene3D G3DSA:3.40.50.1440 8 242 2.8E-79 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 PRINTS PR00423 Cell division protein FtsZ signature 148 169 3.7E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 PRINTS PR00423 Cell division protein FtsZ signature 234 255 3.7E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 PRINTS PR00423 Cell division protein FtsZ signature 120 140 3.7E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 PRINTS PR00423 Cell division protein FtsZ signature 211 233 3.7E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 ProSitePatterns PS01135 FtsZ protein signature 2. 119 140 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 SUPERFAMILY SSF52490 17 230 3.66E-66 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 SMART SM00865 229 350 9.3E-51 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 17 195 1.9E-44 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 ProSitePatterns PS01134 FtsZ protein signature 1. 66 100 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 352 3.0E-135 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 CF65_00827 2e3f567d532f309f9f959dcda90aa4e6 427 Pfam PF12327 FtsZ family, C-terminal domain 244 341 5.4E-33 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 ProSitePatterns PS00786 5'-nucleotidase signature 2. 119 130 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 PRINTS PR01607 Apyrase family signature 438 461 5.8E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 PRINTS PR01607 Apyrase family signature 253 276 5.8E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 PRINTS PR01607 Apyrase family signature 32 50 5.8E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 PRINTS PR01607 Apyrase family signature 225 242 5.8E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 PRINTS PR01607 Apyrase family signature 540 559 5.8E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 PRINTS PR01607 Apyrase family signature 293 313 5.8E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 Gene3D G3DSA:3.60.21.10 27 364 9.8E-127 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 Pfam PF02872 5'-nucleotidase, C-terminal domain 365 559 2.9E-22 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 Pfam PF00149 Calcineurin-like phosphoesterase 34 270 1.1E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 SUPERFAMILY SSF56300 30 362 1.48E-83 T 14-10-2018 CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 SUPERFAMILY SSF55816 365 607 2.35E-41 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 32 656 0.0 T 14-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 CF65_01830 c432fbee4bcfaa6da5f6ccebff23ad0d 658 Gene3D G3DSA:3.90.780.10 425 597 2.7E-53 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CF65_01709 58473ef317d626b716ebab7266762f4a 244 Pfam PF00881 Nitroreductase family 14 165 7.5E-20 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CF65_01709 58473ef317d626b716ebab7266762f4a 244 Gene3D G3DSA:3.40.109.10 8 244 2.2E-72 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CF65_01709 58473ef317d626b716ebab7266762f4a 244 PIRSF PIRSF005426 6 244 1.2E-77 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 CF65_01709 58473ef317d626b716ebab7266762f4a 244 SUPERFAMILY SSF55469 9 243 1.57E-69 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1064 1076 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.1E-29 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 267 2.8E-8 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 356 454 1.5E-16 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Gene3D G3DSA:3.90.1100.10 647 714 7.0E-21 T 14-10-2018 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Gene3D G3DSA:3.90.1110.10 157 278 6.1E-29 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Gene3D G3DSA:2.40.270.10 791 833 8.7E-7 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Gene3D G3DSA:3.90.1100.10 442 624 6.7E-70 T 14-10-2018 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Gene3D G3DSA:3.90.1100.10 19 156 2.4E-48 T 14-10-2018 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 SUPERFAMILY SSF64484 12 1340 0.0 T 14-10-2018 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Gene3D G3DSA:2.40.50.150 834 956 4.5E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Gene3D G3DSA:3.90.1110.10 317 441 6.5E-36 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.301 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Gene3D G3DSA:2.40.270.10 995 1242 4.9E-90 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 657 2.6E-23 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Gene3D G3DSA:3.90.1800.10 1252 1336 6.6E-11 T 14-10-2018 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 5.1E-50 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Gene3D G3DSA:2.40.50.100 715 789 1.3E-31 T 14-10-2018 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 6.4E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_00355 64a52d5439041715c1607cc48a428b05 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 718 1264 1.0E-157 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 SMART SM00766 453 578 1.6E-46 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 PIRSF PIRSF002811 2 585 2.4E-143 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 Gene3D G3DSA:3.90.580.10 1 102 3.1E-39 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 Hamap MF_00974 DNA primase [dnaG]. 4 579 29.553 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 Gene3D G3DSA:1.20.50.20 370 428 2.6E-24 T 14-10-2018 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 Gene3D G3DSA:1.10.860.10 439 583 5.0E-47 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 SMART SM00493 261 332 8.9E-21 T 14-10-2018 IPR006171 TOPRIM domain CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 Pfam PF01807 CHC2 zinc finger 6 101 3.9E-42 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 SUPERFAMILY SSF117023 450 581 4.05E-42 T 14-10-2018 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 Pfam PF08278 DNA primase DnaG DnaB-binding 454 577 7.5E-35 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 SUPERFAMILY SSF57783 5 101 2.21E-38 T 14-10-2018 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 Pfam PF13155 Toprim-like 265 351 4.3E-15 T 14-10-2018 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 SMART SM00400 36 90 4.0E-40 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 Pfam PF08275 DNA primase catalytic core, N-terminal domain 130 253 1.9E-40 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 Gene3D G3DSA:3.40.1360.10 243 369 2.7E-42 T 14-10-2018 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 Gene3D G3DSA:3.90.980.10 119 242 6.6E-43 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 Pfam PF10410 DnaB-helicase binding domain of primase 371 424 4.9E-12 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 TIGRFAM TIGR01391 dnaG: DNA primase 5 421 5.7E-153 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CF65_02398 17165de3e45b2b6a1ad7ce642d722038 585 SUPERFAMILY SSF56731 120 429 1.92E-111 T 14-10-2018 CF65_02226 690d8d3a1bfb65e9bbe31f171ca54971 75 Gene3D G3DSA:3.40.50.300 1 75 5.3E-19 T 14-10-2018 CF65_02226 690d8d3a1bfb65e9bbe31f171ca54971 75 SUPERFAMILY SSF52540 7 72 7.18E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02226 690d8d3a1bfb65e9bbe31f171ca54971 75 Pfam PF00005 ABC transporter 27 72 1.4E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01480 1d63d184bce955d326850bca9ea91c49 142 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 20.892 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01480 1d63d184bce955d326850bca9ea91c49 142 SUPERFAMILY SSF46604 87 135 1.41E-10 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01480 1d63d184bce955d326850bca9ea91c49 142 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 1.0E-31 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01480 1d63d184bce955d326850bca9ea91c49 142 Gene3D G3DSA:1.20.5.440 90 133 6.7E-8 T 14-10-2018 CF65_01480 1d63d184bce955d326850bca9ea91c49 142 Gene3D G3DSA:2.60.15.10 2 89 6.4E-31 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01480 1d63d184bce955d326850bca9ea91c49 142 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 2.6E-29 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01480 1d63d184bce955d326850bca9ea91c49 142 SUPERFAMILY SSF51344 3 85 1.27E-26 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01480 1d63d184bce955d326850bca9ea91c49 142 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 4.7E-43 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 SUPERFAMILY SSF48179 185 337 3.4E-55 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 12 29 7.8E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 179 203 7.8E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 62 89 7.8E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 244 261 7.8E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 138 158 7.8E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 204 228 7.8E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 8 328 36.55 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 PIRSF PIRSF000114 5 337 1.2E-99 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 Gene3D G3DSA:3.40.50.720 3 193 1.6E-54 T 14-10-2018 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 194 215 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 10 165 1.1E-48 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 SUPERFAMILY SSF51735 9 184 3.67E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 186 325 2.4E-50 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CF65_01503 e54f10c05bb5a6b8a577d5cbe65f4d92 337 Gene3D G3DSA:1.10.1040.10 195 337 5.0E-50 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CF65_00281 532bbfe65b4082f130f26d2b0cc39017 289 Pfam PF02666 Phosphatidylserine decarboxylase 68 286 2.0E-59 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CF65_00281 532bbfe65b4082f130f26d2b0cc39017 289 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 15 289 48.407 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CF65_00281 532bbfe65b4082f130f26d2b0cc39017 289 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 54 288 3.5E-94 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 142 164 5.0E-82 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 63 89 5.0E-82 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 312 5.0E-82 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 277 293 5.0E-82 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 227 247 5.0E-82 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 115 132 5.0E-82 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 257 277 5.0E-82 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 193 219 5.0E-82 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 37 614 5.0E-260 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 298 609 7.9E-79 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 TIGRFAM TIGR03145 cyt_nit_nrfE: cytochrome c nitrate reductase biogenesis protein NrfE 1 608 2.2E-285 T 14-10-2018 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 356 368 3.1E-25 T 14-10-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 322 340 3.1E-25 T 14-10-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 490 509 3.1E-25 T 14-10-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 603 616 3.1E-25 T 14-10-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 301 316 3.1E-25 T 14-10-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00041 01ec87817089b2a0ef77d6d9fa2517ec 619 Pfam PF01578 Cytochrome C assembly protein 72 278 9.2E-52 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 Gene3D G3DSA:1.20.120.640 306 459 6.4E-51 T 14-10-2018 CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 SUPERFAMILY SSF52374 1 309 2.82E-105 T 14-10-2018 CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 Gene3D G3DSA:3.40.50.620 1 305 3.1E-140 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 SUPERFAMILY SSF47323 316 458 1.2E-41 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 312 5.2E-148 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 SMART SM00840 341 402 3.4E-29 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 Pfam PF09190 DALR domain 341 402 2.0E-25 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 39.979 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.6E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.6E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.6E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.6E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CF65_00249 60dd2d67a10574b17bb84dd0dff83145 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 6.5E-203 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CF65_01439 10bbcd512d509cce5c7cbfe6bea6d904 86 Pfam PF00037 4Fe-4S binding domain 4 25 2.7E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_01439 10bbcd512d509cce5c7cbfe6bea6d904 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_01439 10bbcd512d509cce5c7cbfe6bea6d904 86 SUPERFAMILY SSF54862 4 74 5.66E-18 T 14-10-2018 CF65_01439 10bbcd512d509cce5c7cbfe6bea6d904 86 Gene3D G3DSA:3.30.70.20 2 86 1.3E-36 T 14-10-2018 CF65_00608 f033d73205189018144e700aa948b881 803 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 803 24.03 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CF65_00608 f033d73205189018144e700aa948b881 803 PIRSF PIRSF006076 1 803 8.4E-229 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CF65_00608 f033d73205189018144e700aa948b881 803 Gene3D G3DSA:3.10.20.310 17 90 5.0E-12 T 14-10-2018 CF65_00608 f033d73205189018144e700aa948b881 803 Gene3D G3DSA:3.10.20.310 91 171 2.4E-15 T 14-10-2018 CF65_00608 f033d73205189018144e700aa948b881 803 Pfam PF07244 Surface antigen variable number repeat 92 170 1.2E-11 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CF65_00608 f033d73205189018144e700aa948b881 803 Pfam PF07244 Surface antigen variable number repeat 177 260 3.2E-13 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CF65_00608 f033d73205189018144e700aa948b881 803 Pfam PF07244 Surface antigen variable number repeat 345 419 1.0E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CF65_00608 f033d73205189018144e700aa948b881 803 Pfam PF07244 Surface antigen variable number repeat 264 342 8.4E-6 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CF65_00608 f033d73205189018144e700aa948b881 803 Pfam PF01103 Surface antigen 446 803 1.5E-90 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CF65_00608 f033d73205189018144e700aa948b881 803 Gene3D G3DSA:2.40.160.50 423 803 1.4E-131 T 14-10-2018 CF65_00608 f033d73205189018144e700aa948b881 803 Gene3D G3DSA:3.10.20.310 345 422 3.5E-20 T 14-10-2018 CF65_00608 f033d73205189018144e700aa948b881 803 Gene3D G3DSA:3.10.20.310 264 344 5.3E-11 T 14-10-2018 CF65_00608 f033d73205189018144e700aa948b881 803 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 23 803 4.6E-259 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CF65_00608 f033d73205189018144e700aa948b881 803 Gene3D G3DSA:3.10.20.310 176 263 4.1E-21 T 14-10-2018 CF65_01421 d6b90c07bf9c51dac2ababa87249541e 224 Gene3D G3DSA:1.10.150.240 20 94 2.4E-75 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CF65_01421 d6b90c07bf9c51dac2ababa87249541e 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 194 2.4E-36 T 14-10-2018 CF65_01421 d6b90c07bf9c51dac2ababa87249541e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 6.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_01421 d6b90c07bf9c51dac2ababa87249541e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 6.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_01421 d6b90c07bf9c51dac2ababa87249541e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 6.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_01421 d6b90c07bf9c51dac2ababa87249541e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 6.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_01421 d6b90c07bf9c51dac2ababa87249541e 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 66 194 3.8E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_01421 d6b90c07bf9c51dac2ababa87249541e 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 6.7E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_01421 d6b90c07bf9c51dac2ababa87249541e 224 SUPERFAMILY SSF56784 4 223 2.72E-63 T 14-10-2018 IPR036412 HAD-like superfamily CF65_01421 d6b90c07bf9c51dac2ababa87249541e 224 Gene3D G3DSA:3.40.50.1000 8 217 2.4E-75 T 14-10-2018 IPR023214 HAD superfamily CF65_01421 d6b90c07bf9c51dac2ababa87249541e 224 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 5 222 37.216 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CF65_01421 d6b90c07bf9c51dac2ababa87249541e 224 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 222 5.0E-69 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 PRINTS PR00982 Lysyl-tRNA synthetase signature 197 213 8.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 261 8.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 PRINTS PR00982 Lysyl-tRNA synthetase signature 181 191 8.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 PRINTS PR00982 Lysyl-tRNA synthetase signature 370 386 8.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 PRINTS PR00982 Lysyl-tRNA synthetase signature 226 239 8.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 Gene3D G3DSA:2.40.50.140 1 136 7.7E-42 T 14-10-2018 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 Pfam PF01336 OB-fold nucleic acid binding domain 50 128 2.9E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 3 488 44.187 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 Pfam PF00152 tRNA synthetases class II (D, K and N) 144 485 3.5E-78 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 SUPERFAMILY SSF55681 144 486 2.39E-119 T 14-10-2018 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 Gene3D G3DSA:3.30.930.10 137 483 2.3E-128 T 14-10-2018 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 SUPERFAMILY SSF50249 2 137 2.01E-42 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 PIRSF PIRSF039101 2 488 1.6E-194 T 14-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CF65_01743 9ccc6a3d4c8fea1df1f086a829351570 488 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 3 487 1.1E-228 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CF65_02265 1fe330daecb7e2518a3ead7cbe3209c8 659 SUPERFAMILY SSF52540 8 356 3.26E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02265 1fe330daecb7e2518a3ead7cbe3209c8 659 Gene3D G3DSA:1.10.10.1020 1 130 3.9E-10 T 14-10-2018 CF65_02265 1fe330daecb7e2518a3ead7cbe3209c8 659 Pfam PF13245 AAA domain 179 337 1.1E-29 T 14-10-2018 CF65_02265 1fe330daecb7e2518a3ead7cbe3209c8 659 SUPERFAMILY SSF52540 314 657 7.3E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02265 1fe330daecb7e2518a3ead7cbe3209c8 659 Pfam PF13538 UvrD-like helicase C-terminal domain 586 632 6.8E-13 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain CF65_02265 1fe330daecb7e2518a3ead7cbe3209c8 659 Gene3D G3DSA:3.40.50.300 560 647 3.1E-18 T 14-10-2018 CF65_02265 1fe330daecb7e2518a3ead7cbe3209c8 659 Gene3D G3DSA:3.40.50.300 400 534 1.3E-16 T 14-10-2018 CF65_02265 1fe330daecb7e2518a3ead7cbe3209c8 659 Gene3D G3DSA:3.40.50.300 132 389 2.9E-64 T 14-10-2018 CF65_02265 1fe330daecb7e2518a3ead7cbe3209c8 659 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 655 45.556 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CF65_02265 1fe330daecb7e2518a3ead7cbe3209c8 659 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 5 656 5.5E-181 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CF65_02265 1fe330daecb7e2518a3ead7cbe3209c8 659 SMART SM00382 188 393 2.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02266 2e58b38476e3a9d53817f3dae735f4a2 1221 Gene3D G3DSA:1.10.3170.10 158 373 5.6E-126 T 14-10-2018 CF65_02266 2e58b38476e3a9d53817f3dae735f4a2 1221 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 467 1.4E-60 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CF65_02266 2e58b38476e3a9d53817f3dae735f4a2 1221 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 4 1221 0.0 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CF65_02266 2e58b38476e3a9d53817f3dae735f4a2 1221 Gene3D G3DSA:3.90.320.10 913 1221 1.5E-85 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal CF65_02266 2e58b38476e3a9d53817f3dae735f4a2 1221 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1000 1195 2.0E-6 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CF65_02266 2e58b38476e3a9d53817f3dae735f4a2 1221 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 2 1221 20.779 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CF65_02266 2e58b38476e3a9d53817f3dae735f4a2 1221 SUPERFAMILY SSF52540 10 845 8.35E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02266 2e58b38476e3a9d53817f3dae735f4a2 1221 Gene3D G3DSA:3.40.50.300 4 466 5.6E-126 T 14-10-2018 CF65_02266 2e58b38476e3a9d53817f3dae735f4a2 1221 Gene3D G3DSA:1.10.486.10 607 751 1.1E-120 T 14-10-2018 CF65_02266 2e58b38476e3a9d53817f3dae735f4a2 1221 SUPERFAMILY SSF52980 923 1221 1.18E-73 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CF65_02266 2e58b38476e3a9d53817f3dae735f4a2 1221 Gene3D G3DSA:3.40.50.300 476 846 1.1E-120 T 14-10-2018 CF65_02266 2e58b38476e3a9d53817f3dae735f4a2 1221 Pfam PF13361 UvrD-like helicase C-terminal domain 472 840 2.8E-24 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CF65_02281 70773983d65384d53f4caafc498598b6 184 Gene3D G3DSA:3.40.50.300 4 84 1.3E-10 T 14-10-2018 CF65_02281 70773983d65384d53f4caafc498598b6 184 Gene3D G3DSA:1.10.8.60 85 150 2.0E-9 T 14-10-2018 CF65_02281 70773983d65384d53f4caafc498598b6 184 SUPERFAMILY SSF52540 9 148 8.46E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02284 eb2bc88d929dd06b19eae15c04dcbe71 660 SUPERFAMILY SSF55874 503 655 1.3E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_02284 eb2bc88d929dd06b19eae15c04dcbe71 660 Gene3D G3DSA:1.10.287.130 429 510 6.9E-15 T 14-10-2018 CF65_02284 eb2bc88d929dd06b19eae15c04dcbe71 660 Gene3D G3DSA:3.30.565.10 512 659 1.5E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_02284 eb2bc88d929dd06b19eae15c04dcbe71 660 SMART SM00387 552 658 9.0E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_02284 eb2bc88d929dd06b19eae15c04dcbe71 660 SUPERFAMILY SSF47384 440 511 3.53E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CF65_02284 eb2bc88d929dd06b19eae15c04dcbe71 660 PIRSF PIRSF037119 1 400 5.6E-87 T 14-10-2018 IPR017116 Signal transduction histidine kinase, PgtB CF65_02284 eb2bc88d929dd06b19eae15c04dcbe71 660 PIRSF PIRSF037119 395 660 1.6E-100 T 14-10-2018 IPR017116 Signal transduction histidine kinase, PgtB CF65_02284 eb2bc88d929dd06b19eae15c04dcbe71 660 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 552 651 1.5E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_02380 b0341fd8be9f6bfbce95c89f40ae285b 348 Gene3D G3DSA:3.40.50.1980 187 347 8.8E-58 T 14-10-2018 CF65_02380 b0341fd8be9f6bfbce95c89f40ae285b 348 Gene3D G3DSA:3.40.50.1980 22 186 1.4E-42 T 14-10-2018 CF65_02380 b0341fd8be9f6bfbce95c89f40ae285b 348 Pfam PF01497 Periplasmic binding protein 86 295 9.1E-25 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain CF65_02380 b0341fd8be9f6bfbce95c89f40ae285b 348 SUPERFAMILY SSF53807 26 345 2.0E-51 T 14-10-2018 CF65_02280 2a6eb469253b2911c9da5a969e2d7eb6 279 PIRSF PIRSF004750 4 279 1.3E-124 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CF65_02280 2a6eb469253b2911c9da5a969e2d7eb6 279 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 19 129 2.1E-46 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CF65_02280 2a6eb469253b2911c9da5a969e2d7eb6 279 Gene3D G3DSA:3.30.1130.10 142 279 8.3E-59 T 14-10-2018 CF65_02280 2a6eb469253b2911c9da5a969e2d7eb6 279 TIGRFAM TIGR03138 QueF: queuine synthase 9 279 2.7E-121 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CF65_02280 2a6eb469253b2911c9da5a969e2d7eb6 279 Pfam PF14489 QueF-like protein 193 266 7.3E-26 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CF65_02280 2a6eb469253b2911c9da5a969e2d7eb6 279 Gene3D G3DSA:3.30.1130.10 19 137 6.6E-43 T 14-10-2018 CF65_02280 2a6eb469253b2911c9da5a969e2d7eb6 279 SUPERFAMILY SSF55620 183 263 3.63E-9 T 14-10-2018 CF65_02280 2a6eb469253b2911c9da5a969e2d7eb6 279 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 279 153.12 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CF65_01718 3b0738faf8dee392a7472b161abe08a7 149 SUPERFAMILY SSF102400 4 147 3.01E-47 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily CF65_01718 3b0738faf8dee392a7472b161abe08a7 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 4 143 4.2E-40 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CF65_01718 3b0738faf8dee392a7472b161abe08a7 149 Gene3D G3DSA:3.40.50.10110 1 147 1.4E-50 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily CF65_02895 e7affd404b5b892100d08bb1709bd98b 213 Gene3D G3DSA:1.10.3720.10 1 208 7.5E-21 T 14-10-2018 IPR035906 MetI-like superfamily CF65_02895 e7affd404b5b892100d08bb1709bd98b 213 SUPERFAMILY SSF161098 2 197 6.87E-21 T 14-10-2018 IPR035906 MetI-like superfamily CF65_02895 e7affd404b5b892100d08bb1709bd98b 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 19 213 1.8E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01402 571034cc9c333441f829e1cf6d62c0ac 253 SUPERFAMILY SSF53448 1 146 1.27E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01402 571034cc9c333441f829e1cf6d62c0ac 253 Gene3D G3DSA:3.90.550.10 1 161 2.6E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01402 571034cc9c333441f829e1cf6d62c0ac 253 Pfam PF00535 Glycosyl transferase family 2 5 125 8.8E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CF65_01291 85bbd4c14d528cd3eba82397760fb66a 1031 ProSitePatterns PS00211 ABC transporters family signature. 918 932 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01291 85bbd4c14d528cd3eba82397760fb66a 1031 Gene3D G3DSA:3.40.50.300 705 1024 1.4E-140 T 14-10-2018 CF65_01291 85bbd4c14d528cd3eba82397760fb66a 1031 Gene3D G3DSA:1.20.1580.10 780 918 1.4E-140 T 14-10-2018 CF65_01291 85bbd4c14d528cd3eba82397760fb66a 1031 Gene3D G3DSA:1.20.1580.10 178 580 2.8E-244 T 14-10-2018 CF65_01291 85bbd4c14d528cd3eba82397760fb66a 1031 Gene3D G3DSA:3.40.50.300 94 682 2.8E-244 T 14-10-2018 CF65_01291 85bbd4c14d528cd3eba82397760fb66a 1031 Gene3D G3DSA:3.30.190.20 218 327 2.8E-244 T 14-10-2018 CF65_01291 85bbd4c14d528cd3eba82397760fb66a 1031 SUPERFAMILY SSF52540 706 999 5.74E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01291 85bbd4c14d528cd3eba82397760fb66a 1031 SUPERFAMILY SSF52540 91 657 1.05E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01291 85bbd4c14d528cd3eba82397760fb66a 1031 ProSitePatterns PS00211 ABC transporters family signature. 575 589 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01291 85bbd4c14d528cd3eba82397760fb66a 1031 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 92 1013 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 CF65_01291 85bbd4c14d528cd3eba82397760fb66a 1031 Gene3D G3DSA:1.10.8.280 375 491 2.8E-244 T 14-10-2018 CF65_01291 85bbd4c14d528cd3eba82397760fb66a 1031 Hamap MF_00205 UvrABC system protein A [uvrA]. 89 1028 23.031 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 CF65_01042 d10ec14563f6fc4ccdb9851285005f4b 359 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CF65_01042 d10ec14563f6fc4ccdb9851285005f4b 359 Pfam PF01464 Transglycosylase SLT domain 196 317 1.5E-30 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 CF65_01042 d10ec14563f6fc4ccdb9851285005f4b 359 SUPERFAMILY SSF53955 163 356 4.12E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily CF65_01042 d10ec14563f6fc4ccdb9851285005f4b 359 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 357 64.625 T 14-10-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 CF65_01042 d10ec14563f6fc4ccdb9851285005f4b 359 Gene3D G3DSA:1.10.530.10 177 354 5.3E-50 T 14-10-2018 CF65_01042 d10ec14563f6fc4ccdb9851285005f4b 359 Pfam PF11873 Domain of unknown function (DUF3393) 26 190 4.8E-64 T 14-10-2018 IPR024570 Murein transglycosylase-C, N-terminal CF65_02043 39668186340a050e08446e9f4d7c75a2 430 Pfam PF08013 Tagatose 6 phosphate kinase 1 418 2.0E-187 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CF65_02043 39668186340a050e08446e9f4d7c75a2 430 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 2 419 7.7E-211 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CF65_02043 39668186340a050e08446e9f4d7c75a2 430 PIRSF PIRSF009264 1 424 9.6E-181 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CF65_02043 39668186340a050e08446e9f4d7c75a2 430 Gene3D G3DSA:3.20.20.70 5 411 2.4E-175 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02043 39668186340a050e08446e9f4d7c75a2 430 SUPERFAMILY SSF51569 1 419 1.59E-159 T 14-10-2018 CF65_02043 39668186340a050e08446e9f4d7c75a2 430 Gene3D G3DSA:1.10.400.20 282 405 2.4E-175 T 14-10-2018 CF65_01555 b7ed8ef69e7def80843e2cc309520be5 496 Gene3D G3DSA:3.40.50.300 8 275 7.7E-58 T 14-10-2018 CF65_01555 b7ed8ef69e7def80843e2cc309520be5 496 Pfam PF00005 ABC transporter 333 464 1.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01555 b7ed8ef69e7def80843e2cc309520be5 496 SUPERFAMILY SSF52540 295 476 7.51E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01555 b7ed8ef69e7def80843e2cc309520be5 496 Gene3D G3DSA:3.40.50.300 276 483 6.9E-39 T 14-10-2018 CF65_01555 b7ed8ef69e7def80843e2cc309520be5 496 Pfam PF12848 ABC transporter 217 295 3.2E-27 T 14-10-2018 IPR032781 ABC-transporter extension domain CF65_01555 b7ed8ef69e7def80843e2cc309520be5 496 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01555 b7ed8ef69e7def80843e2cc309520be5 496 SMART SM00382 26 223 1.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01555 b7ed8ef69e7def80843e2cc309520be5 496 SMART SM00382 342 493 1.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01555 b7ed8ef69e7def80843e2cc309520be5 496 Pfam PF00005 ABC transporter 17 178 2.7E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01555 b7ed8ef69e7def80843e2cc309520be5 496 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01555 b7ed8ef69e7def80843e2cc309520be5 496 SUPERFAMILY SSF52540 4 252 1.49E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02794 2bf0b1765a2ce3a09d9bea0a233a76b7 276 SUPERFAMILY SSF51182 10 255 8.89E-67 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily CF65_02794 2bf0b1765a2ce3a09d9bea0a233a76b7 276 PIRSF PIRSF036628 1 272 7.6E-109 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 CF65_02794 2bf0b1765a2ce3a09d9bea0a233a76b7 276 Pfam PF04962 KduI/IolB family 12 266 2.9E-108 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CF65_02794 2bf0b1765a2ce3a09d9bea0a233a76b7 276 Gene3D G3DSA:2.60.120.10 17 124 9.5E-40 T 14-10-2018 IPR014710 RmlC-like jelly roll fold CF65_02794 2bf0b1765a2ce3a09d9bea0a233a76b7 276 Gene3D G3DSA:2.60.120.10 125 273 3.6E-60 T 14-10-2018 IPR014710 RmlC-like jelly roll fold CF65_02794 2bf0b1765a2ce3a09d9bea0a233a76b7 276 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 20 266 3.3E-100 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 Pfam PF02779 Transketolase, pyrimidine binding domain 354 526 2.6E-48 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 Gene3D G3DSA:3.40.50.970 1 326 6.5E-136 T 14-10-2018 CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 Gene3D G3DSA:3.40.50.970 327 539 3.7E-84 T 14-10-2018 CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 SUPERFAMILY SSF52922 535 665 1.18E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 4.3E-170 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 664 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 ProSitePatterns PS00802 Transketolase signature 2. 469 485 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 SUPERFAMILY SSF52518 337 528 7.02E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 Pfam PF02780 Transketolase, C-terminal domain 549 657 9.7E-19 T 14-10-2018 IPR033248 Transketolase, C-terminal domain CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 Gene3D G3DSA:3.40.50.920 540 665 4.3E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 SUPERFAMILY SSF52518 5 321 5.36E-123 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_01563 7673277bbc0fefb63b597695da57e6ef 665 SMART SM00861 355 527 9.8E-70 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_00831 d72cd03677912e7274ba65d2bb37681a 255 Pfam PF03799 Cell division protein FtsQ 128 242 1.1E-23 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB CF65_00831 d72cd03677912e7274ba65d2bb37681a 255 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 24 250 22.729 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 CF65_00831 d72cd03677912e7274ba65d2bb37681a 255 Gene3D G3DSA:3.40.50.11690 125 254 5.4E-38 T 14-10-2018 CF65_00831 d72cd03677912e7274ba65d2bb37681a 255 Pfam PF08478 POTRA domain, FtsQ-type 55 124 6.2E-18 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type CF65_00831 d72cd03677912e7274ba65d2bb37681a 255 Gene3D G3DSA:3.10.20.310 56 124 6.0E-22 T 14-10-2018 CF65_00250 d729573c0dd322807855459e5c98ea2f 320 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 320 6.3E-158 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CF65_00250 d729573c0dd322807855459e5c98ea2f 320 SMART SM00729 83 291 1.5E-16 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CF65_00250 d729573c0dd322807855459e5c98ea2f 320 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 29 72 1.2E-7 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CF65_00250 d729573c0dd322807855459e5c98ea2f 320 Pfam PF04055 Radical SAM superfamily 90 250 1.3E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CF65_00250 d729573c0dd322807855459e5c98ea2f 320 Gene3D G3DSA:3.20.20.70 80 287 6.6E-24 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_00250 d729573c0dd322807855459e5c98ea2f 320 Hamap MF_00206 Lipoyl synthase [lipA]. 1 320 155.435 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CF65_00250 d729573c0dd322807855459e5c98ea2f 320 SUPERFAMILY SSF102114 53 314 1.15E-69 T 14-10-2018 CF65_00250 d729573c0dd322807855459e5c98ea2f 320 PIRSF PIRSF005963 5 319 2.8E-130 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CF65_02501 af282df2b6aa23c32f2dd18748004c09 681 Gene3D G3DSA:3.30.300.150 535 663 6.3E-37 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_02501 af282df2b6aa23c32f2dd18748004c09 681 Gene3D G3DSA:3.40.50.300 13 177 8.7E-101 T 14-10-2018 CF65_02501 af282df2b6aa23c32f2dd18748004c09 681 SUPERFAMILY SSF52540 34 223 1.06E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02501 af282df2b6aa23c32f2dd18748004c09 681 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 355 1.0E-26 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CF65_02501 af282df2b6aa23c32f2dd18748004c09 681 SMART SM00382 37 178 8.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02501 af282df2b6aa23c32f2dd18748004c09 681 SUPERFAMILY SSF48019 243 359 7.65E-29 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CF65_02501 af282df2b6aa23c32f2dd18748004c09 681 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 537 678 4.5E-39 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_02501 af282df2b6aa23c32f2dd18748004c09 681 Gene3D G3DSA:1.20.272.10 242 359 5.5E-36 T 14-10-2018 CF65_02501 af282df2b6aa23c32f2dd18748004c09 681 Gene3D G3DSA:1.10.8.60 8 240 8.7E-101 T 14-10-2018 CF65_02501 af282df2b6aa23c32f2dd18748004c09 681 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.5E-43 T 14-10-2018 CF65_02501 af282df2b6aa23c32f2dd18748004c09 681 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 352 1.1E-131 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CF65_03014 62c4de0df489f1136495959f3953afd8 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 40 3.0E-15 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_03014 62c4de0df489f1136495959f3953afd8 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_03014 62c4de0df489f1136495959f3953afd8 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.204 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_03014 62c4de0df489f1136495959f3953afd8 44 Pfam PF00468 Ribosomal protein L34 1 44 5.0E-25 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_03014 62c4de0df489f1136495959f3953afd8 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.5E-27 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00959 a223d1639f6412077424b0b2ce7cedad 209 SMART SM00421 146 203 6.5E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CF65_00959 a223d1639f6412077424b0b2ce7cedad 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.7E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CF65_00959 a223d1639f6412077424b0b2ce7cedad 209 SUPERFAMILY SSF46894 134 206 9.52E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CF65_00959 a223d1639f6412077424b0b2ce7cedad 209 Gene3D G3DSA:3.40.50.12740 5 207 1.5E-65 T 14-10-2018 CF65_00959 a223d1639f6412077424b0b2ce7cedad 209 Pfam PF00072 Response regulator receiver domain 7 118 2.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CF65_00959 a223d1639f6412077424b0b2ce7cedad 209 SUPERFAMILY SSF52172 4 136 1.99E-33 T 14-10-2018 IPR011006 CheY-like superfamily CF65_00959 a223d1639f6412077424b0b2ce7cedad 209 SMART SM00448 5 118 9.6E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CF65_00959 a223d1639f6412077424b0b2ce7cedad 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CF65_00959 a223d1639f6412077424b0b2ce7cedad 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.9E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CF65_00959 a223d1639f6412077424b0b2ce7cedad 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.9E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CF65_00959 a223d1639f6412077424b0b2ce7cedad 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.9E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CF65_02267 57d701aaa57dd6b9f48b79598f012cfb 127 Pfam PF02635 DsrE/DsrF-like family 11 126 1.6E-19 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein CF65_02267 57d701aaa57dd6b9f48b79598f012cfb 127 SUPERFAMILY SSF75169 10 126 7.2E-28 T 14-10-2018 IPR027396 DsrEFH-like CF65_02267 57d701aaa57dd6b9f48b79598f012cfb 127 Gene3D G3DSA:3.40.1260.10 10 126 8.5E-29 T 14-10-2018 IPR027396 DsrEFH-like CF65_00585 a0b949ec90430ced803b7b301dfa16e3 168 SUPERFAMILY SSF46785 6 73 7.1E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00585 a0b949ec90430ced803b7b301dfa16e3 168 SUPERFAMILY SSF100950 75 109 1.67E-5 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_00585 a0b949ec90430ced803b7b301dfa16e3 168 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.4E-25 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_00585 a0b949ec90430ced803b7b301dfa16e3 168 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.8E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_00585 a0b949ec90430ced803b7b301dfa16e3 168 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.8E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_00585 a0b949ec90430ced803b7b301dfa16e3 168 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CF65_00585 a0b949ec90430ced803b7b301dfa16e3 168 Gene3D G3DSA:1.10.10.10 1 55 8.4E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00585 a0b949ec90430ced803b7b301dfa16e3 168 SMART SM00420 6 58 4.7E-29 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_02789 cea3f3d4be1f0971349ad6996fe2fa6f 379 SUPERFAMILY SSF51735 3 158 3.95E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02789 cea3f3d4be1f0971349ad6996fe2fa6f 379 SUPERFAMILY SSF55347 135 316 2.78E-35 T 14-10-2018 CF65_02789 cea3f3d4be1f0971349ad6996fe2fa6f 379 Gene3D G3DSA:3.30.360.10 136 375 1.3E-60 T 14-10-2018 CF65_02789 cea3f3d4be1f0971349ad6996fe2fa6f 379 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 4.5E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CF65_02789 cea3f3d4be1f0971349ad6996fe2fa6f 379 Gene3D G3DSA:3.40.50.720 1 133 1.0E-38 T 14-10-2018 CF65_02789 cea3f3d4be1f0971349ad6996fe2fa6f 379 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 268 2.9E-10 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 181 470 1.3E-123 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 Gene3D G3DSA:3.40.50.720 2 182 8.5E-59 T 14-10-2018 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 SUPERFAMILY SSF51735 6 176 1.86E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 171 7.4E-53 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 5 28 1.3E-83 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 358 380 1.3E-83 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 121 146 1.3E-83 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 251 278 1.3E-83 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 68 97 1.3E-83 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 170 198 1.3E-83 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 Gene3D G3DSA:1.20.5.320 437 484 2.0E-25 T 14-10-2018 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 SMART SM01350 181 471 1.1E-208 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 SUPERFAMILY SSF48179 179 474 3.6E-126 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 Gene3D G3DSA:1.10.1040.10 183 436 1.4E-100 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 6 471 2.6E-236 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 255 267 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CF65_01175 524a0e6ac45f9137acb1ec27a6112df1 484 PIRSF PIRSF000109 1 479 3.9E-246 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CF65_01579 9ae3e2b87d492a9cd7133867276e50d2 319 SUPERFAMILY SSF46689 267 317 4.93E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01579 9ae3e2b87d492a9cd7133867276e50d2 319 Gene3D G3DSA:3.40.50.300 2 179 2.6E-47 T 14-10-2018 CF65_01579 9ae3e2b87d492a9cd7133867276e50d2 319 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 270 318 8.7E-29 T 14-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 CF65_01579 9ae3e2b87d492a9cd7133867276e50d2 319 Pfam PF00158 Sigma-54 interaction domain 13 174 6.9E-46 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CF65_01579 9ae3e2b87d492a9cd7133867276e50d2 319 SUPERFAMILY SSF52540 13 249 1.34E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01579 9ae3e2b87d492a9cd7133867276e50d2 319 Gene3D G3DSA:1.10.10.60 260 318 2.5E-27 T 14-10-2018 CF65_01579 9ae3e2b87d492a9cd7133867276e50d2 319 Gene3D G3DSA:1.10.8.60 180 257 1.3E-18 T 14-10-2018 CF65_01579 9ae3e2b87d492a9cd7133867276e50d2 319 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 37 50 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CF65_01868 f0a4b6f41a917da97b722427f8f61fc2 334 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 233 323 5.7E-17 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CF65_01868 f0a4b6f41a917da97b722427f8f61fc2 334 SUPERFAMILY SSF102114 20 325 1.44E-89 T 14-10-2018 CF65_01868 f0a4b6f41a917da97b722427f8f61fc2 334 Hamap MF_01694 Biotin synthase [bioB]. 18 326 40.087 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CF65_01868 f0a4b6f41a917da97b722427f8f61fc2 334 SMART SM00729 56 264 9.2E-35 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CF65_01868 f0a4b6f41a917da97b722427f8f61fc2 334 Pfam PF04055 Radical SAM superfamily 63 216 3.3E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CF65_01868 f0a4b6f41a917da97b722427f8f61fc2 334 PIRSF PIRSF001619 2 332 1.8E-130 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CF65_01868 f0a4b6f41a917da97b722427f8f61fc2 334 TIGRFAM TIGR00433 bioB: biotin synthase 28 324 5.4E-118 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CF65_01868 f0a4b6f41a917da97b722427f8f61fc2 334 Gene3D G3DSA:3.20.20.70 18 328 3.7E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_01868 f0a4b6f41a917da97b722427f8f61fc2 334 SMART SM00876 233 325 6.7E-44 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CF65_02389 f31d3a145c66ce8dad527bac6e0c8dc4 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 7.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CF65_02389 f31d3a145c66ce8dad527bac6e0c8dc4 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 7.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CF65_02389 f31d3a145c66ce8dad527bac6e0c8dc4 251 SUPERFAMILY SSF48008 93 229 1.26E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CF65_02389 f31d3a145c66ce8dad527bac6e0c8dc4 251 SMART SM00895 94 221 9.9E-24 T 14-10-2018 IPR011711 GntR, C-terminal CF65_02389 f31d3a145c66ce8dad527bac6e0c8dc4 251 SUPERFAMILY SSF46785 5 75 7.22E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_02389 f31d3a145c66ce8dad527bac6e0c8dc4 251 Gene3D G3DSA:1.20.120.530 93 229 3.2E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CF65_02389 f31d3a145c66ce8dad527bac6e0c8dc4 251 Pfam PF07729 FCD domain 94 220 1.1E-22 T 14-10-2018 IPR011711 GntR, C-terminal CF65_02389 f31d3a145c66ce8dad527bac6e0c8dc4 251 Gene3D G3DSA:1.10.10.10 6 72 9.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02389 f31d3a145c66ce8dad527bac6e0c8dc4 251 SMART SM00345 12 71 1.2E-23 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CF65_02389 f31d3a145c66ce8dad527bac6e0c8dc4 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 7.2E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CF65_00059 675a72e5a1ed79ebb362a7dc5bfa2e4e 221 PIRSF PIRSF002764 1 220 5.4E-78 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CF65_00059 675a72e5a1ed79ebb362a7dc5bfa2e4e 221 Pfam PF03379 CcmB protein 3 217 4.2E-89 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00059 675a72e5a1ed79ebb362a7dc5bfa2e4e 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 156 175 4.0E-69 T 14-10-2018 CF65_00059 675a72e5a1ed79ebb362a7dc5bfa2e4e 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 76 99 4.0E-69 T 14-10-2018 CF65_00059 675a72e5a1ed79ebb362a7dc5bfa2e4e 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 101 119 4.0E-69 T 14-10-2018 CF65_00059 675a72e5a1ed79ebb362a7dc5bfa2e4e 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 193 216 4.0E-69 T 14-10-2018 CF65_00059 675a72e5a1ed79ebb362a7dc5bfa2e4e 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 27 48 4.0E-69 T 14-10-2018 CF65_00059 675a72e5a1ed79ebb362a7dc5bfa2e4e 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 53 70 4.0E-69 T 14-10-2018 CF65_00059 675a72e5a1ed79ebb362a7dc5bfa2e4e 221 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 6 216 1.0E-92 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CF65_00970 33c79f2e6457bb61207d2bbeeb8dc6bc 354 SUPERFAMILY SSF51726 1 351 2.27E-121 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CF65_00970 33c79f2e6457bb61207d2bbeeb8dc6bc 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CF65_00970 33c79f2e6457bb61207d2bbeeb8dc6bc 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 5.4E-139 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CF65_00970 33c79f2e6457bb61207d2bbeeb8dc6bc 354 Gene3D G3DSA:3.20.20.210 1 354 5.5E-157 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CF65_00970 33c79f2e6457bb61207d2bbeeb8dc6bc 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.581 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CF65_00970 33c79f2e6457bb61207d2bbeeb8dc6bc 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CF65_00970 33c79f2e6457bb61207d2bbeeb8dc6bc 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 1.5E-135 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CF65_02316 ad0edc3e7a0b5992b540229239eb029d 444 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 7 345 1.3E-133 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CF65_02316 ad0edc3e7a0b5992b540229239eb029d 444 Pfam PF13742 OB-fold nucleic acid binding domain 6 98 1.9E-31 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CF65_02316 ad0edc3e7a0b5992b540229239eb029d 444 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 3 439 30.661 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CF65_02316 ad0edc3e7a0b5992b540229239eb029d 444 Pfam PF02601 Exonuclease VII, large subunit 122 436 7.7E-101 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CF65_00833 e3fdb0b407da6a27d4ef72d3ff7cb544 476 Gene3D G3DSA:3.40.50.720 19 106 4.3E-32 T 14-10-2018 CF65_00833 e3fdb0b407da6a27d4ef72d3ff7cb544 476 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 412 6.5E-23 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CF65_00833 e3fdb0b407da6a27d4ef72d3ff7cb544 476 SUPERFAMILY SSF53244 322 471 5.95E-47 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CF65_00833 e3fdb0b407da6a27d4ef72d3ff7cb544 476 SUPERFAMILY SSF51984 19 105 3.79E-28 T 14-10-2018 CF65_00833 e3fdb0b407da6a27d4ef72d3ff7cb544 476 SUPERFAMILY SSF53623 104 321 1.83E-72 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CF65_00833 e3fdb0b407da6a27d4ef72d3ff7cb544 476 Pfam PF01225 Mur ligase family, catalytic domain 20 117 9.3E-29 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CF65_00833 e3fdb0b407da6a27d4ef72d3ff7cb544 476 Gene3D G3DSA:3.40.1190.10 107 320 8.4E-85 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CF65_00833 e3fdb0b407da6a27d4ef72d3ff7cb544 476 Gene3D G3DSA:3.90.190.20 321 475 8.7E-49 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CF65_00833 e3fdb0b407da6a27d4ef72d3ff7cb544 476 Pfam PF08245 Mur ligase middle domain 123 303 3.4E-28 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CF65_00833 e3fdb0b407da6a27d4ef72d3ff7cb544 476 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 18 475 42.694 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00833 e3fdb0b407da6a27d4ef72d3ff7cb544 476 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 20 469 4.1E-184 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 726 4.9E-291 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 630 727 1.9E-23 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 Gene3D G3DSA:3.20.20.80 230 614 1.1E-169 T 14-10-2018 CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 SUPERFAMILY SSF51445 229 619 3.2E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 Gene3D G3DSA:2.60.40.10 3 221 6.9E-73 T 14-10-2018 IPR013783 Immunoglobulin-like fold CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 SUPERFAMILY SSF81296 118 221 1.03E-34 T 14-10-2018 IPR014756 Immunoglobulin E-set CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 1.5E-23 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 PIRSF PIRSF000463 6 731 3.5E-284 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 SUPERFAMILY SSF81296 16 117 3.0E-18 T 14-10-2018 IPR014756 Immunoglobulin E-set CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 Gene3D G3DSA:2.60.40.1180 625 729 4.8E-39 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 SUPERFAMILY SSF51011 625 728 4.32E-36 T 14-10-2018 CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 728 43.442 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 SMART SM00642 247 612 1.2E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CF65_02087 354769d613bc9278b77ba3d9c41202c4 731 Pfam PF00128 Alpha amylase, catalytic domain 272 344 4.7E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CF65_02603 3495b26e8895de8df9debc1ac611446f 285 Pfam PF14559 Tetratricopeptide repeat 125 192 2.0E-17 T 14-10-2018 CF65_02603 3495b26e8895de8df9debc1ac611446f 285 Gene3D G3DSA:3.40.30.10 5 112 2.7E-21 T 14-10-2018 CF65_02603 3495b26e8895de8df9debc1ac611446f 285 SUPERFAMILY SSF52833 7 114 3.16E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_02603 3495b26e8895de8df9debc1ac611446f 285 Pfam PF00085 Thioredoxin 10 108 1.8E-14 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 CF65_02603 3495b26e8895de8df9debc1ac611446f 285 Gene3D G3DSA:1.25.40.10 113 198 3.7E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_02603 3495b26e8895de8df9debc1ac611446f 285 Gene3D G3DSA:1.25.40.10 199 285 5.0E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_02603 3495b26e8895de8df9debc1ac611446f 285 Pfam PF14561 Tetratricopeptide repeat 198 285 1.1E-25 T 14-10-2018 CF65_02603 3495b26e8895de8df9debc1ac611446f 285 SUPERFAMILY SSF48452 108 247 3.57E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_02081 b92c703ed7109b7f1654870ef9c4a1ae 394 Gene3D G3DSA:2.40.420.20 40 376 8.7E-119 T 14-10-2018 CF65_02081 b92c703ed7109b7f1654870ef9c4a1ae 394 Gene3D G3DSA:2.40.30.170 45 317 8.7E-119 T 14-10-2018 CF65_02081 b92c703ed7109b7f1654870ef9c4a1ae 394 Gene3D G3DSA:2.40.50.100 56 218 8.7E-119 T 14-10-2018 CF65_02081 b92c703ed7109b7f1654870ef9c4a1ae 394 SUPERFAMILY SSF111369 48 259 3.01E-24 T 14-10-2018 CF65_02081 b92c703ed7109b7f1654870ef9c4a1ae 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 261 2.1E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CF65_02081 b92c703ed7109b7f1654870ef9c4a1ae 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 379 1.1E-49 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CF65_02081 b92c703ed7109b7f1654870ef9c4a1ae 394 Gene3D G3DSA:1.10.287.470 90 181 8.7E-119 T 14-10-2018 CF65_02092 5846ad86363339d2875bc64f9c0a046f 479 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 44.562 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CF65_02092 5846ad86363339d2875bc64f9c0a046f 479 SUPERFAMILY SSF53756 3 478 4.89E-116 T 14-10-2018 CF65_02092 5846ad86363339d2875bc64f9c0a046f 479 Pfam PF00534 Glycosyl transferases group 1 289 445 1.5E-12 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 CF65_02092 5846ad86363339d2875bc64f9c0a046f 479 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 2.3E-162 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CF65_02092 5846ad86363339d2875bc64f9c0a046f 479 Pfam PF08323 Starch synthase catalytic domain 2 233 5.3E-68 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CF65_02092 5846ad86363339d2875bc64f9c0a046f 479 Gene3D G3DSA:3.40.50.2000 3 473 1.0E-178 T 14-10-2018 CF65_02092 5846ad86363339d2875bc64f9c0a046f 479 Gene3D G3DSA:3.40.50.2000 249 458 1.0E-178 T 14-10-2018 CF65_01948 88db08e843942d0efb7b02b31e508e3f 289 SUPERFAMILY SSF161098 51 272 4.71E-40 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01948 88db08e843942d0efb7b02b31e508e3f 289 Gene3D G3DSA:1.10.3720.10 10 282 1.1E-35 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01948 88db08e843942d0efb7b02b31e508e3f 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 277 6.2E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 1 582 3.7E-215 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 SUPERFAMILY SSF46589 832 896 8.89E-18 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 879 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 897 14.935 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 834 893 1.8E-17 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 PRINTS PR00986 Valyl-tRNA synthetase signature 451 469 1.1E-28 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 PRINTS PR00986 Valyl-tRNA synthetase signature 320 333 1.1E-28 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 PRINTS PR00986 Valyl-tRNA synthetase signature 420 441 1.1E-28 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 PRINTS PR00986 Valyl-tRNA synthetase signature 187 204 1.1E-28 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 Gene3D G3DSA:3.40.50.620 1 147 1.6E-44 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 SUPERFAMILY SSF50677 141 316 2.09E-60 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 SUPERFAMILY SSF47323 593 847 9.53E-66 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 SUPERFAMILY SSF52374 1 592 3.84E-120 T 14-10-2018 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 Pfam PF08264 Anticodon-binding domain of tRNA 622 770 6.2E-43 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 Gene3D G3DSA:3.90.740.10 148 308 4.2E-52 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 Gene3D G3DSA:1.10.730.10 586 764 6.9E-55 T 14-10-2018 CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 Gene3D G3DSA:3.40.50.620 309 581 8.7E-61 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01724 9477bad433f1c38f6afd3ae78bd542a6 899 Gene3D G3DSA:1.10.287.380 825 896 6.1E-19 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CF65_01982 7c225de74ee15d41dcd91bfb37bab8bb 796 Pfam PF00343 Carbohydrate phosphorylase 91 793 3.6E-303 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CF65_01982 7c225de74ee15d41dcd91bfb37bab8bb 796 Gene3D G3DSA:3.40.50.2000 58 793 0.0 T 14-10-2018 CF65_01982 7c225de74ee15d41dcd91bfb37bab8bb 796 PIRSF PIRSF000460 24 796 2.0E-204 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CF65_01982 7c225de74ee15d41dcd91bfb37bab8bb 796 Gene3D G3DSA:3.40.50.2000 454 780 0.0 T 14-10-2018 CF65_01982 7c225de74ee15d41dcd91bfb37bab8bb 796 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 52 793 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CF65_01982 7c225de74ee15d41dcd91bfb37bab8bb 796 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 640 652 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CF65_01982 7c225de74ee15d41dcd91bfb37bab8bb 796 SUPERFAMILY SSF53756 51 794 2.98E-286 T 14-10-2018 CF65_01593 8692dfaa81e2f7ba5b697e6521cd7fdd 306 Gene3D G3DSA:3.90.550.10 2 233 1.4E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01593 8692dfaa81e2f7ba5b697e6521cd7fdd 306 SUPERFAMILY SSF53448 8 258 2.77E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01593 8692dfaa81e2f7ba5b697e6521cd7fdd 306 Pfam PF00535 Glycosyl transferase family 2 11 159 1.7E-16 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CF65_01422 5081ba4de0e2ec03c64db08e62483c48 216 Pfam PF00005 ABC transporter 18 165 5.1E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01422 5081ba4de0e2ec03c64db08e62483c48 216 Gene3D G3DSA:3.40.50.300 1 216 3.3E-63 T 14-10-2018 CF65_01422 5081ba4de0e2ec03c64db08e62483c48 216 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 4.3E-83 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CF65_01422 5081ba4de0e2ec03c64db08e62483c48 216 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01422 5081ba4de0e2ec03c64db08e62483c48 216 SMART SM00382 27 216 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01422 5081ba4de0e2ec03c64db08e62483c48 216 SUPERFAMILY SSF52540 1 215 4.03E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01525 13290a32d1950220b46e895c9f75a3b3 241 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 236 2.9E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01525 13290a32d1950220b46e895c9f75a3b3 241 Gene3D G3DSA:1.10.3720.10 21 238 2.2E-52 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01525 13290a32d1950220b46e895c9f75a3b3 241 SUPERFAMILY SSF161098 28 221 1.44E-43 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01525 13290a32d1950220b46e895c9f75a3b3 241 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 28 130 2.6E-25 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CF65_01893 380a0ef6b34da14d2464d89a78383947 317 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 317 50.746 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_01893 380a0ef6b34da14d2464d89a78383947 317 SUPERFAMILY SSF52096 5 316 1.83E-102 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CF65_01893 380a0ef6b34da14d2464d89a78383947 317 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 149 1.1E-63 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_01893 380a0ef6b34da14d2464d89a78383947 317 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 1 317 1.2E-168 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_01893 380a0ef6b34da14d2464d89a78383947 317 Gene3D G3DSA:3.90.226.10 1 317 6.5E-120 T 14-10-2018 CF65_01893 380a0ef6b34da14d2464d89a78383947 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 89 100 9.9E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_01893 380a0ef6b34da14d2464d89a78383947 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 154 167 9.9E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_01893 380a0ef6b34da14d2464d89a78383947 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 114 132 9.9E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_01893 380a0ef6b34da14d2464d89a78383947 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 170 183 9.9E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_01893 380a0ef6b34da14d2464d89a78383947 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 135 151 9.9E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_01893 380a0ef6b34da14d2464d89a78383947 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 198 207 9.9E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 PIRSF PIRSF039102 5 49 3.3E-11 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 PIRSF PIRSF039102 49 309 2.0E-90 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 SUPERFAMILY SSF56059 101 305 4.77E-56 T 14-10-2018 CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 250 278 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 Gene3D G3DSA:3.30.1490.20 116 185 2.6E-77 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 8 308 36.646 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 Gene3D G3DSA:3.30.470.20 90 303 2.6E-77 T 14-10-2018 CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 SUPERFAMILY SSF52440 8 101 2.59E-32 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 Pfam PF01820 D-ala D-ala ligase N-terminus 9 91 1.7E-20 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 Pfam PF07478 D-ala D-ala ligase C-terminus 108 305 7.2E-69 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 9 306 6.8E-112 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 68 79 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00832 9d374d69517a9441c3eff220cb5cafd7 309 Gene3D G3DSA:3.40.50.20 1 89 3.2E-33 T 14-10-2018 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 Pfam PF01019 Gamma-glutamyltranspeptidase 74 581 1.2E-190 T 14-10-2018 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 Gene3D G3DSA:3.60.20.40 401 589 8.3E-76 T 14-10-2018 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 SUPERFAMILY SSF56235 51 589 1.0E-199 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 401 425 - T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 59 580 3.9E-206 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 81 106 4.1E-81 T 14-10-2018 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 155 173 4.1E-81 T 14-10-2018 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 401 419 4.1E-81 T 14-10-2018 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 173 192 4.1E-81 T 14-10-2018 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 425 443 4.1E-81 T 14-10-2018 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 271 287 4.1E-81 T 14-10-2018 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 466 481 4.1E-81 T 14-10-2018 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 301 320 4.1E-81 T 14-10-2018 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 490 507 4.1E-81 T 14-10-2018 CF65_01845 7fa7a9c2e8312e12f0ab4dbb1747972b 589 Gene3D G3DSA:1.10.246.130 287 400 6.5E-46 T 14-10-2018 CF65_01490 72bb11af317f64b5ad7eb23edf1540f3 262 Hamap MF_01393 ATP synthase subunit a [atpB]. 7 260 14.992 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01490 72bb11af317f64b5ad7eb23edf1540f3 262 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 21 256 9.9E-53 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01490 72bb11af317f64b5ad7eb23edf1540f3 262 Gene3D G3DSA:1.20.120.220 80 260 2.4E-56 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01490 72bb11af317f64b5ad7eb23edf1540f3 262 ProSitePatterns PS00449 ATP synthase a subunit signature. 190 199 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01490 72bb11af317f64b5ad7eb23edf1540f3 262 Pfam PF00119 ATP synthase A chain 32 254 5.3E-55 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01490 72bb11af317f64b5ad7eb23edf1540f3 262 SUPERFAMILY SSF81336 84 254 5.23E-43 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01490 72bb11af317f64b5ad7eb23edf1540f3 262 PRINTS PR00123 ATP synthase A subunit signature 187 209 3.3E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01490 72bb11af317f64b5ad7eb23edf1540f3 262 PRINTS PR00123 ATP synthase A subunit signature 240 255 3.3E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01490 72bb11af317f64b5ad7eb23edf1540f3 262 PRINTS PR00123 ATP synthase A subunit signature 89 105 3.3E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_00635 bc8e24c3e7daa4141105a2acfca7a459 284 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 60 73 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CF65_00635 bc8e24c3e7daa4141105a2acfca7a459 284 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 26 41 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CF65_00635 bc8e24c3e7daa4141105a2acfca7a459 284 Pfam PF00809 Pterin binding enzyme 27 266 1.4E-86 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CF65_00635 bc8e24c3e7daa4141105a2acfca7a459 284 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 25 280 1.1E-105 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CF65_00635 bc8e24c3e7daa4141105a2acfca7a459 284 Gene3D G3DSA:3.20.20.20 10 284 1.3E-107 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CF65_00635 bc8e24c3e7daa4141105a2acfca7a459 284 SUPERFAMILY SSF51717 12 283 5.63E-103 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CF65_01113 c41a768ba24f895e0c93d35fcc89117e 90 Pfam PF13411 MerR HTH family regulatory protein 3 69 2.0E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_01113 c41a768ba24f895e0c93d35fcc89117e 90 Gene3D G3DSA:1.10.1660.10 1 90 4.9E-29 T 14-10-2018 CF65_01113 c41a768ba24f895e0c93d35fcc89117e 90 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 5.4E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_01113 c41a768ba24f895e0c93d35fcc89117e 90 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 5.4E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_01113 c41a768ba24f895e0c93d35fcc89117e 90 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 5.4E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_01113 c41a768ba24f895e0c93d35fcc89117e 90 SUPERFAMILY SSF46955 3 88 2.97E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily CF65_01113 c41a768ba24f895e0c93d35fcc89117e 90 SMART SM00422 3 72 1.1E-23 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 Gene3D G3DSA:3.40.930.10 1 142 1.8E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 Pfam PF00381 PTS HPr component phosphorylation site 425 504 3.6E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 Pfam PF00381 PTS HPr component phosphorylation site 297 376 1.2E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 Gene3D G3DSA:3.30.1340.10 295 378 7.8E-26 T 14-10-2018 IPR035895 HPr-like superfamily CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 PIRSF PIRSF000690 1 509 4.0E-272 T 14-10-2018 IPR016258 Multiphosphoryl transfer protein FruB CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 SUPERFAMILY SSF55594 424 509 1.83E-21 T 14-10-2018 IPR035895 HPr-like superfamily CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 297 376 2.4E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 425 503 1.6E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 SUPERFAMILY SSF55804 150 271 2.62E-9 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 432 439 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 PRINTS PR00107 Phosphocarrier protein signature 305 321 3.0E-15 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 PRINTS PR00107 Phosphocarrier protein signature 333 348 3.0E-15 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 PRINTS PR00107 Phosphocarrier protein signature 348 365 3.0E-15 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 Gene3D G3DSA:3.30.1340.10 422 509 1.8E-22 T 14-10-2018 IPR035895 HPr-like superfamily CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 SUPERFAMILY SSF55594 297 383 2.22E-23 T 14-10-2018 IPR035895 HPr-like superfamily CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 461 476 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 305 312 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 SUPERFAMILY SSF55804 3 140 3.14E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CF65_00332 5c51a38f7a644a7ceac349e4b9bf40a4 509 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 1.0E-27 T 14-10-2018 IPR002178 PTS EIIA type-2 domain CF65_01499 9d244bfcaa2e4f342d7de34494b86be2 337 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 2.6E-173 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CF65_01499 9d244bfcaa2e4f342d7de34494b86be2 337 Gene3D G3DSA:3.40.190.90 110 277 4.2E-125 T 14-10-2018 CF65_01499 9d244bfcaa2e4f342d7de34494b86be2 337 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 1.1E-130 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CF65_01499 9d244bfcaa2e4f342d7de34494b86be2 337 PIRSF PIRSF004532 1 333 1.1E-133 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CF65_01499 9d244bfcaa2e4f342d7de34494b86be2 337 SUPERFAMILY SSF56655 1 325 4.09E-109 T 14-10-2018 CF65_01499 9d244bfcaa2e4f342d7de34494b86be2 337 Gene3D G3DSA:3.30.540.10 7 320 4.2E-125 T 14-10-2018 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 Pfam PF00342 Phosphoglucose isomerase 52 542 1.4E-260 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 Gene3D G3DSA:3.40.50.10490 98 291 7.6E-238 T 14-10-2018 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 Gene3D G3DSA:3.40.50.10490 12 507 7.6E-238 T 14-10-2018 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 SUPERFAMILY SSF53697 5 548 1.72E-223 T 14-10-2018 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 525 42.829 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 Gene3D G3DSA:1.10.1390.10 508 548 4.0E-19 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 3.3E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 3.3E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 3.3E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 3.3E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 3.3E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01624 d871c0d0d5f7983a66a263ee577cf725 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 3.3E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01161 97480f6a853017a8271702cb08484aa6 293 Gene3D G3DSA:1.10.10.2730 250 291 2.8E-15 T 14-10-2018 CF65_01161 97480f6a853017a8271702cb08484aa6 293 Gene3D G3DSA:2.60.120.10 26 90 1.0E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold CF65_01161 97480f6a853017a8271702cb08484aa6 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 275 3.3E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CF65_01161 97480f6a853017a8271702cb08484aa6 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 291 3.3E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CF65_01161 97480f6a853017a8271702cb08484aa6 293 SUPERFAMILY SSF46689 244 292 3.54E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01161 97480f6a853017a8271702cb08484aa6 293 Pfam PF12833 Helix-turn-helix domain 214 292 1.8E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CF65_01161 97480f6a853017a8271702cb08484aa6 293 Gene3D G3DSA:1.10.10.60 190 249 8.6E-9 T 14-10-2018 CF65_01161 97480f6a853017a8271702cb08484aa6 293 SUPERFAMILY SSF46689 191 241 2.94E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01161 97480f6a853017a8271702cb08484aa6 293 Pfam PF12852 Cupin 2 176 6.3E-22 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain CF65_01161 97480f6a853017a8271702cb08484aa6 293 SMART SM00342 208 291 1.4E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CF65_01161 97480f6a853017a8271702cb08484aa6 293 SUPERFAMILY SSF51215 41 81 3.92E-8 T 14-10-2018 IPR037923 Transcription regulator HTH-like CF65_02786 0ffd50208e6f66bb31aae9ef39bf4281 501 SUPERFAMILY SSF52540 277 492 4.65E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02786 0ffd50208e6f66bb31aae9ef39bf4281 501 SMART SM00382 286 481 6.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02786 0ffd50208e6f66bb31aae9ef39bf4281 501 SMART SM00382 35 225 8.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02786 0ffd50208e6f66bb31aae9ef39bf4281 501 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02786 0ffd50208e6f66bb31aae9ef39bf4281 501 Pfam PF00005 ABC transporter 26 176 2.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02786 0ffd50208e6f66bb31aae9ef39bf4281 501 Gene3D G3DSA:3.40.50.300 267 498 7.9E-43 T 14-10-2018 CF65_02786 0ffd50208e6f66bb31aae9ef39bf4281 501 Gene3D G3DSA:3.40.50.300 1 264 3.1E-56 T 14-10-2018 CF65_02786 0ffd50208e6f66bb31aae9ef39bf4281 501 Pfam PF00005 ABC transporter 278 431 2.5E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02786 0ffd50208e6f66bb31aae9ef39bf4281 501 SUPERFAMILY SSF52540 9 237 2.71E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02712 21605594891a7143a879e460f6da9bfe 685 Pfam PF03572 Peptidase family S41 361 530 2.7E-49 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CF65_02712 21605594891a7143a879e460f6da9bfe 685 Gene3D G3DSA:3.90.226.10 329 552 1.3E-55 T 14-10-2018 CF65_02712 21605594891a7143a879e460f6da9bfe 685 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 535 667 2.5E-40 T 14-10-2018 IPR020992 Tail specific protease, C-terminal CF65_02712 21605594891a7143a879e460f6da9bfe 685 SMART SM00228 252 329 2.6E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 CF65_02712 21605594891a7143a879e460f6da9bfe 685 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 200 552 3.0E-119 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CF65_02712 21605594891a7143a879e460f6da9bfe 685 SUPERFAMILY SSF52096 183 548 2.15E-65 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CF65_02712 21605594891a7143a879e460f6da9bfe 685 Gene3D G3DSA:2.30.42.10 243 328 8.8E-11 T 14-10-2018 CF65_02712 21605594891a7143a879e460f6da9bfe 685 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 247 326 1.1E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 CF65_02712 21605594891a7143a879e460f6da9bfe 685 SMART SM00245 331 532 3.8E-69 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CF65_02712 21605594891a7143a879e460f6da9bfe 685 SUPERFAMILY SSF50156 223 350 4.22E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 CF65_02286 2a4b3a74ff6ef8656f3d6c86b920c447 293 SUPERFAMILY SSF53850 24 179 4.64E-27 T 14-10-2018 CF65_02286 2a4b3a74ff6ef8656f3d6c86b920c447 293 Pfam PF13343 Bacterial extracellular solute-binding protein 79 171 6.4E-13 T 14-10-2018 CF65_02286 2a4b3a74ff6ef8656f3d6c86b920c447 293 Gene3D G3DSA:3.40.190.10 131 165 4.3E-29 T 14-10-2018 CF65_02286 2a4b3a74ff6ef8656f3d6c86b920c447 293 Pfam PF08402 TOBE domain 226 286 1.4E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 CF65_02286 2a4b3a74ff6ef8656f3d6c86b920c447 293 SUPERFAMILY SSF50331 185 285 4.31E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CF65_02286 2a4b3a74ff6ef8656f3d6c86b920c447 293 Gene3D G3DSA:3.40.190.10 30 130 4.3E-29 T 14-10-2018 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 1 826 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 SMART SM00863 625 668 1.3E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 SUPERFAMILY SSF101353 228 435 3.66E-59 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 847 196.341 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 SUPERFAMILY SSF50447 427 524 2.24E-19 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 Pfam PF02272 DHHA1 domain 707 843 6.7E-31 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 Gene3D G3DSA:3.30.980.10 535 669 8.2E-50 T 14-10-2018 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 Gene3D G3DSA:3.10.310.40 736 844 1.0E-32 T 14-10-2018 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 Pfam PF01411 tRNA synthetases class II (A) 1 526 1.1E-220 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 PRINTS PR00980 Alanyl-tRNA synthetase signature 48 59 3.0E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 221 3.0E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 PRINTS PR00980 Alanyl-tRNA synthetase signature 254 270 3.0E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 291 3.0E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 PRINTS PR00980 Alanyl-tRNA synthetase signature 181 192 3.0E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 Gene3D G3DSA:3.30.930.10 1 224 7.2E-110 T 14-10-2018 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 SUPERFAMILY SSF55681 1 227 1.79E-95 T 14-10-2018 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 SUPERFAMILY SSF55186 524 684 2.09E-49 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 625 668 1.1E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 Gene3D G3DSA:2.40.30.130 431 524 1.2E-11 T 14-10-2018 CF65_01011 e7d47bf91341184d48ff51503322ff7a 847 Gene3D G3DSA:3.30.54.20 596 649 8.2E-50 T 14-10-2018 CF65_01356 5342da1af609d069ca0220a6244912aa 262 Gene3D G3DSA:1.25.40.10 30 250 2.3E-60 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_01356 5342da1af609d069ca0220a6244912aa 262 Pfam PF13525 Outer membrane lipoprotein 29 236 2.1E-68 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like CF65_01356 5342da1af609d069ca0220a6244912aa 262 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 241 5.7E-80 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD CF65_01356 5342da1af609d069ca0220a6244912aa 262 SUPERFAMILY SSF48452 33 168 1.77E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_01356 5342da1af609d069ca0220a6244912aa 262 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 242 34.911 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD CF65_01793 489021c65bc8d1066bebbf9c731c73fc 385 Gene3D G3DSA:3.40.50.150 205 384 1.5E-55 T 14-10-2018 CF65_01793 489021c65bc8d1066bebbf9c731c73fc 385 PIRSF PIRSF028774 24 385 6.7E-177 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CF65_01793 489021c65bc8d1066bebbf9c731c73fc 385 SUPERFAMILY SSF53335 214 324 5.43E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01793 489021c65bc8d1066bebbf9c731c73fc 385 Gene3D G3DSA:3.30.2300.20 103 204 6.3E-36 T 14-10-2018 CF65_01793 489021c65bc8d1066bebbf9c731c73fc 385 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 24 385 81.078 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CF65_01793 489021c65bc8d1066bebbf9c731c73fc 385 Gene3D G3DSA:3.30.70.2810 24 102 3.5E-32 T 14-10-2018 CF65_01793 489021c65bc8d1066bebbf9c731c73fc 385 Pfam PF01728 FtsJ-like methyltransferase 215 311 1.7E-8 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CF65_01774 be614e6b0a6cd2692e621df74dd67a10 294 SUPERFAMILY SSF51730 20 292 9.02E-95 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like CF65_01774 be614e6b0a6cd2692e621df74dd67a10 294 Pfam PF02219 Methylenetetrahydrofolate reductase 11 289 3.4E-108 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CF65_01774 be614e6b0a6cd2692e621df74dd67a10 294 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 23 288 6.0E-100 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CF65_01774 be614e6b0a6cd2692e621df74dd67a10 294 Gene3D G3DSA:3.20.20.220 1 294 3.7E-111 T 14-10-2018 CF65_01906 1c457e84c6198511891dea836b908980 221 SUPERFAMILY SSF47413 11 78 1.87E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_01906 1c457e84c6198511891dea836b908980 221 Gene3D G3DSA:2.10.109.10 86 219 5.5E-33 T 14-10-2018 CF65_01906 1c457e84c6198511891dea836b908980 221 SUPERFAMILY SSF51306 90 215 8.63E-23 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CF65_01906 1c457e84c6198511891dea836b908980 221 Gene3D G3DSA:1.10.260.40 7 77 4.7E-7 T 14-10-2018 CF65_01906 1c457e84c6198511891dea836b908980 221 Pfam PF01381 Helix-turn-helix 34 73 2.4E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CF65_01906 1c457e84c6198511891dea836b908980 221 Pfam PF00717 Peptidase S24-like 131 178 4.8E-11 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_00036 fb29138e34e9cfef21643d4afa80fa97 636 Pfam PF13518 Helix-turn-helix domain 96 148 6.3E-14 T 14-10-2018 CF65_00036 fb29138e34e9cfef21643d4afa80fa97 636 Gene3D G3DSA:3.30.420.10 238 442 2.8E-34 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CF65_00036 fb29138e34e9cfef21643d4afa80fa97 636 Pfam PF00665 Integrase core domain 240 378 1.6E-17 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CF65_00036 fb29138e34e9cfef21643d4afa80fa97 636 SUPERFAMILY SSF46689 97 203 5.61E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_00036 fb29138e34e9cfef21643d4afa80fa97 636 SUPERFAMILY SSF53098 236 434 1.77E-26 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_00036 fb29138e34e9cfef21643d4afa80fa97 636 Pfam PF09299 Mu transposase, C-terminal 463 524 2.0E-12 T 14-10-2018 IPR015378 Transposase-like, Mu, C-terminal CF65_00265 44b793d25a315b8e590368a8a5ab40e2 399 SMART SM00382 150 335 1.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00265 44b793d25a315b8e590368a8a5ab40e2 399 SUPERFAMILY SSF52540 70 351 3.27E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00265 44b793d25a315b8e590368a8a5ab40e2 399 SMART SM00357 32 98 3.2E-21 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 CF65_00265 44b793d25a315b8e590368a8a5ab40e2 399 Gene3D G3DSA:1.10.720.10 1 27 8.8E-12 T 14-10-2018 CF65_00265 44b793d25a315b8e590368a8a5ab40e2 399 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 140 343 1.4E-22 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_00265 44b793d25a315b8e590368a8a5ab40e2 399 Gene3D G3DSA:2.40.50.140 28 103 2.2E-34 T 14-10-2018 CF65_00265 44b793d25a315b8e590368a8a5ab40e2 399 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 399 242.595 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CF65_00265 44b793d25a315b8e590368a8a5ab40e2 399 TIGRFAM TIGR00767 rho: transcription termination factor Rho 1 397 1.5E-215 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CF65_00265 44b793d25a315b8e590368a8a5ab40e2 399 Gene3D G3DSA:3.40.50.300 110 397 1.3E-132 T 14-10-2018 CF65_00265 44b793d25a315b8e590368a8a5ab40e2 399 SUPERFAMILY SSF50249 28 105 1.27E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_00265 44b793d25a315b8e590368a8a5ab40e2 399 Pfam PF07497 Rho termination factor, RNA-binding domain 33 105 3.5E-32 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CF65_00265 44b793d25a315b8e590368a8a5ab40e2 399 Pfam PF07498 Rho termination factor, N-terminal domain 1 27 1.7E-10 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 Gene3D G3DSA:3.40.50.720 466 811 9.2E-120 T 14-10-2018 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 Gene3D G3DSA:3.30.360.10 625 795 9.2E-120 T 14-10-2018 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 Pfam PF00696 Amino acid kinase family 2 284 2.2E-41 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 SUPERFAMILY SSF55021 302 380 2.47E-21 T 14-10-2018 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 SUPERFAMILY SSF55347 614 797 4.25E-51 T 14-10-2018 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 Gene3D G3DSA:3.30.2130.10 302 464 1.5E-49 T 14-10-2018 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 Pfam PF01842 ACT domain 324 379 1.6E-9 T 14-10-2018 IPR002912 ACT domain CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 Gene3D G3DSA:3.40.1160.10 3 295 3.8E-79 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 PIRSF PIRSF000727 1 815 0.0 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 4.7E-30 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 5.6E-146 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 Pfam PF00742 Homoserine dehydrogenase 614 810 2.5E-48 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 Pfam PF13840 ACT domain 394 454 1.7E-9 T 14-10-2018 IPR027795 CASTOR, ACT domain CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 Gene3D G3DSA:1.20.120.1320 41 142 3.8E-79 T 14-10-2018 CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 SUPERFAMILY SSF53633 1 298 1.73E-67 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 SUPERFAMILY SSF51735 463 636 2.15E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02357 8916f0f1989270cceb7b9f9003c84003 815 SUPERFAMILY SSF55021 383 474 4.35E-23 T 14-10-2018 CF65_00179 8b6149f6562f3f04033f3eb720e18b6b 462 Gene3D G3DSA:1.25.40.10 26 223 1.6E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00179 8b6149f6562f3f04033f3eb720e18b6b 462 Pfam PF04575 Protein of unknown function (DUF560) 175 462 1.6E-98 T 14-10-2018 IPR007655 Protein of unknown function DUF560 CF65_00179 8b6149f6562f3f04033f3eb720e18b6b 462 SUPERFAMILY SSF48452 71 156 3.75E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_01419 e1f51adf60dd56f85263eb4bb057f1c0 224 SUPERFAMILY SSF51366 3 217 6.42E-77 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CF65_01419 e1f51adf60dd56f85263eb4bb057f1c0 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.1E-90 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CF65_01419 e1f51adf60dd56f85263eb4bb057f1c0 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CF65_01419 e1f51adf60dd56f85263eb4bb057f1c0 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 8.5E-97 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CF65_01419 e1f51adf60dd56f85263eb4bb057f1c0 224 PIRSF PIRSF001461 1 224 6.4E-104 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CF65_01419 e1f51adf60dd56f85263eb4bb057f1c0 224 Gene3D G3DSA:3.20.20.70 5 221 7.0E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_01419 e1f51adf60dd56f85263eb4bb057f1c0 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CF65_02249 d375350f9ff21dc147d40384afe02e7b 485 SUPERFAMILY SSF52402 174 372 1.3E-40 T 14-10-2018 CF65_02249 d375350f9ff21dc147d40384afe02e7b 485 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 7.6E-72 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 CF65_02249 d375350f9ff21dc147d40384afe02e7b 485 Pfam PF02926 THUMP domain 46 161 4.4E-23 T 14-10-2018 IPR004114 THUMP domain GO:0003723 CF65_02249 d375350f9ff21dc147d40384afe02e7b 485 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 481 3.8E-39 T 14-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 CF65_02249 d375350f9ff21dc147d40384afe02e7b 485 SMART SM00981 75 165 6.7E-23 T 14-10-2018 IPR004114 THUMP domain GO:0003723 CF65_02249 d375350f9ff21dc147d40384afe02e7b 485 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 1.1E-120 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 CF65_02249 d375350f9ff21dc147d40384afe02e7b 485 Gene3D G3DSA:3.40.50.620 175 397 1.7E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02249 d375350f9ff21dc147d40384afe02e7b 485 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 485 211.882 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 CF65_02249 d375350f9ff21dc147d40384afe02e7b 485 Gene3D G3DSA:3.40.250.10 398 484 3.2E-12 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily CF65_02249 d375350f9ff21dc147d40384afe02e7b 485 SUPERFAMILY SSF52821 407 481 8.37E-12 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily CF65_02249 d375350f9ff21dc147d40384afe02e7b 485 SUPERFAMILY SSF143437 1 173 2.44E-47 T 14-10-2018 CF65_02249 d375350f9ff21dc147d40384afe02e7b 485 Gene3D G3DSA:3.30.2130.30 1 174 2.0E-35 T 14-10-2018 CF65_00684 496e4d823572df087a9d99fb56718612 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 214.917 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CF65_00684 496e4d823572df087a9d99fb56718612 432 Gene3D G3DSA:3.40.440.10 6 249 2.6E-104 T 14-10-2018 CF65_00684 496e4d823572df087a9d99fb56718612 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 7.1E-207 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CF65_00684 496e4d823572df087a9d99fb56718612 432 SUPERFAMILY SSF52540 4 430 1.91E-180 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00684 496e4d823572df087a9d99fb56718612 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CF65_00684 496e4d823572df087a9d99fb56718612 432 SMART SM00788 4 425 6.6E-297 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CF65_00684 496e4d823572df087a9d99fb56718612 432 Gene3D G3DSA:1.10.300.10 102 201 2.6E-104 T 14-10-2018 CF65_00684 496e4d823572df087a9d99fb56718612 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CF65_00684 496e4d823572df087a9d99fb56718612 432 Gene3D G3DSA:3.90.170.10 267 432 2.9E-69 T 14-10-2018 CF65_00684 496e4d823572df087a9d99fb56718612 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 2.3E-178 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CF65_02282 dfa9d1900b62d06e85410204b3db54ae 136 Pfam PF14532 Sigma-54 interaction domain 70 128 3.4E-11 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CF65_02282 dfa9d1900b62d06e85410204b3db54ae 136 Gene3D G3DSA:3.40.50.300 68 135 1.3E-12 T 14-10-2018 CF65_02282 dfa9d1900b62d06e85410204b3db54ae 136 Gene3D G3DSA:3.40.50.2300 1 60 6.8E-18 T 14-10-2018 CF65_02282 dfa9d1900b62d06e85410204b3db54ae 136 SUPERFAMILY SSF52172 3 113 7.76E-16 T 14-10-2018 IPR011006 CheY-like superfamily CF65_02282 dfa9d1900b62d06e85410204b3db54ae 136 Pfam PF00072 Response regulator receiver domain 3 43 1.9E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CF65_00792 7a151690ccc150399aae9d7957ba1d6f 147 Gene3D G3DSA:3.30.1310.10 37 147 4.5E-49 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CF65_00792 7a151690ccc150399aae9d7957ba1d6f 147 Pfam PF02575 YbaB/EbfC DNA-binding family 49 137 3.5E-35 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CF65_00792 7a151690ccc150399aae9d7957ba1d6f 147 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 43 136 23.701 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CF65_00792 7a151690ccc150399aae9d7957ba1d6f 147 PIRSF PIRSF004555 41 147 1.4E-38 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CF65_00792 7a151690ccc150399aae9d7957ba1d6f 147 SUPERFAMILY SSF82607 49 141 7.85E-36 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CF65_00792 7a151690ccc150399aae9d7957ba1d6f 147 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 38 143 2.2E-41 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CF65_00002 0dcded6f96ee5c32a6c7189a704630fa 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 6.2E-45 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 CF65_00002 0dcded6f96ee5c32a6c7189a704630fa 366 PIRSF PIRSF000804 1 366 8.1E-122 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CF65_00002 0dcded6f96ee5c32a6c7189a704630fa 366 Gene3D G3DSA:3.10.150.10 1 123 6.6E-42 T 14-10-2018 CF65_00002 0dcded6f96ee5c32a6c7189a704630fa 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 9.5E-130 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CF65_00002 0dcded6f96ee5c32a6c7189a704630fa 366 SUPERFAMILY SSF55979 125 244 2.47E-30 T 14-10-2018 CF65_00002 0dcded6f96ee5c32a6c7189a704630fa 366 SMART SM00480 17 362 1.9E-165 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CF65_00002 0dcded6f96ee5c32a6c7189a704630fa 366 SUPERFAMILY SSF55979 245 366 1.72E-37 T 14-10-2018 CF65_00002 0dcded6f96ee5c32a6c7189a704630fa 366 Gene3D G3DSA:3.10.150.10 248 366 9.3E-40 T 14-10-2018 CF65_00002 0dcded6f96ee5c32a6c7189a704630fa 366 SUPERFAMILY SSF55979 1 121 1.45E-29 T 14-10-2018 CF65_00002 0dcded6f96ee5c32a6c7189a704630fa 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 1.9E-38 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 CF65_00002 0dcded6f96ee5c32a6c7189a704630fa 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.9E-42 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 CF65_00002 0dcded6f96ee5c32a6c7189a704630fa 366 Gene3D G3DSA:3.10.150.10 124 247 3.3E-38 T 14-10-2018 CF65_01023 d914c2d8bb61285f8e436012b71af7d6 85 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.7E-19 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM CF65_02300 713a0f9fe17911776d363107b0664e89 275 Hamap MF_00258 Glutamate racemase [murI]. 7 258 33.725 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_02300 713a0f9fe17911776d363107b0664e89 275 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 243 4.2E-73 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_02300 713a0f9fe17911776d363107b0664e89 275 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 184 194 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_02300 713a0f9fe17911776d363107b0664e89 275 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_02300 713a0f9fe17911776d363107b0664e89 275 SUPERFAMILY SSF53681 112 264 2.45E-31 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_02300 713a0f9fe17911776d363107b0664e89 275 Gene3D G3DSA:3.40.50.1860 99 211 3.5E-86 T 14-10-2018 CF65_02300 713a0f9fe17911776d363107b0664e89 275 Gene3D G3DSA:3.40.50.1860 11 243 3.5E-86 T 14-10-2018 CF65_02300 713a0f9fe17911776d363107b0664e89 275 SUPERFAMILY SSF53681 9 110 1.31E-30 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_02300 713a0f9fe17911776d363107b0664e89 275 Pfam PF01177 Asp/Glu/Hydantoin racemase 12 218 9.5E-27 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_00860 ae4ce7293aff9b8d05a08c7a3673277c 194 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.742 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CF65_00860 ae4ce7293aff9b8d05a08c7a3673277c 194 Gene3D G3DSA:3.40.50.10490 1 192 3.2E-71 T 14-10-2018 CF65_00860 ae4ce7293aff9b8d05a08c7a3673277c 194 SUPERFAMILY SSF53697 2 189 4.85E-53 T 14-10-2018 CF65_00860 ae4ce7293aff9b8d05a08c7a3673277c 194 Pfam PF13580 SIS domain 26 146 5.5E-31 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CF65_00860 ae4ce7293aff9b8d05a08c7a3673277c 194 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.3E-86 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CF65_01801 83a51595222362e810a7238e070414ed 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 1.5E-131 T 14-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 CF65_01801 83a51595222362e810a7238e070414ed 311 PIRSF PIRSF000102 1 309 6.4E-61 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CF65_01801 83a51595222362e810a7238e070414ed 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 310 59.412 T 14-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CF65_01801 83a51595222362e810a7238e070414ed 311 SUPERFAMILY SSF51735 1 145 2.86E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01801 83a51595222362e810a7238e070414ed 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.4E-44 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CF65_01801 83a51595222362e810a7238e070414ed 311 Gene3D G3DSA:3.40.50.720 1 146 3.0E-62 T 14-10-2018 CF65_01801 83a51595222362e810a7238e070414ed 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 308 2.5E-49 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CF65_01801 83a51595222362e810a7238e070414ed 311 Gene3D G3DSA:3.90.110.10 147 310 3.4E-53 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CF65_01801 83a51595222362e810a7238e070414ed 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CF65_01801 83a51595222362e810a7238e070414ed 311 SUPERFAMILY SSF56327 146 310 8.18E-42 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CF65_00811 d14b8455d00b3bfd7cc156e15409327e 404 Pfam PF13173 AAA domain 19 135 1.3E-24 T 14-10-2018 CF65_00811 d14b8455d00b3bfd7cc156e15409327e 404 SUPERFAMILY SSF52540 8 138 1.14E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00811 d14b8455d00b3bfd7cc156e15409327e 404 SUPERFAMILY SSF52980 284 358 8.8E-6 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CF65_00811 d14b8455d00b3bfd7cc156e15409327e 404 Pfam PF13635 Domain of unknown function (DUF4143) 195 353 2.1E-28 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 CF65_01045 ddf924e1e12ff3f9736d5b338516f5db 255 Gene3D G3DSA:3.40.50.150 47 255 5.1E-68 T 14-10-2018 CF65_01045 ddf924e1e12ff3f9736d5b338516f5db 255 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 65 254 1.6E-72 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CF65_01045 ddf924e1e12ff3f9736d5b338516f5db 255 SUPERFAMILY SSF53335 33 254 1.62E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01045 ddf924e1e12ff3f9736d5b338516f5db 255 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 41 255 29.273 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CF65_01045 ddf924e1e12ff3f9736d5b338516f5db 255 Pfam PF02390 Putative methyltransferase 80 250 1.3E-61 T 14-10-2018 CF65_01187 231f2cefe34863fb267a41fa7c3410ec 194 Gene3D G3DSA:2.50.20.10 22 189 2.2E-24 T 14-10-2018 CF65_01187 231f2cefe34863fb267a41fa7c3410ec 194 SUPERFAMILY SSF89392 23 187 2.04E-14 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CF65_01187 231f2cefe34863fb267a41fa7c3410ec 194 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 32 187 3.9E-11 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CF65_02251 920fc15d2bc6387c31a59af175823926 826 Gene3D G3DSA:3.40.50.740 95 571 8.3E-246 T 14-10-2018 CF65_02251 920fc15d2bc6387c31a59af175823926 826 Gene3D G3DSA:3.90.55.10 84 622 8.3E-246 T 14-10-2018 CF65_02251 920fc15d2bc6387c31a59af175823926 826 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 9 41 0.0015 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CF65_02251 920fc15d2bc6387c31a59af175823926 826 Pfam PF00384 Molybdopterin oxidoreductase 95 563 1.8E-113 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02251 920fc15d2bc6387c31a59af175823926 826 SUPERFAMILY SSF50692 642 808 5.39E-45 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CF65_02251 920fc15d2bc6387c31a59af175823926 826 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 52 825 0.0 T 14-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 CF65_02251 920fc15d2bc6387c31a59af175823926 826 Pfam PF01568 Molydopterin dinucleotide binding domain 681 801 1.6E-28 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CF65_02251 920fc15d2bc6387c31a59af175823926 826 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 505 522 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CF65_02251 920fc15d2bc6387c31a59af175823926 826 SUPERFAMILY SSF53706 53 682 9.68E-175 T 14-10-2018 CF65_02251 920fc15d2bc6387c31a59af175823926 826 Gene3D G3DSA:2.40.40.20 656 819 3.6E-52 T 14-10-2018 CF65_02251 920fc15d2bc6387c31a59af175823926 826 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 720 747 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CF65_02251 920fc15d2bc6387c31a59af175823926 826 Gene3D G3DSA:3.40.228.10 188 648 8.3E-246 T 14-10-2018 CF65_02208 6eca5954a5db3e663e119bc458317038 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 264 6.9E-107 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CF65_02208 6eca5954a5db3e663e119bc458317038 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CF65_02208 6eca5954a5db3e663e119bc458317038 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 266 36.124 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CF65_02208 6eca5954a5db3e663e119bc458317038 268 Gene3D G3DSA:3.20.20.70 1 268 5.1E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02208 6eca5954a5db3e663e119bc458317038 268 Pfam PF00290 Tryptophan synthase alpha chain 8 267 6.9E-96 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CF65_02208 6eca5954a5db3e663e119bc458317038 268 SUPERFAMILY SSF51366 1 267 1.98E-84 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CF65_01245 c79a1f8985aa57e24321ceba253a26c2 409 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 9 389 7.4E-130 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01245 c79a1f8985aa57e24321ceba253a26c2 409 PRINTS PR00166 Aromatic amino acid permease signature 342 361 1.8E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01245 c79a1f8985aa57e24321ceba253a26c2 409 PRINTS PR00166 Aromatic amino acid permease signature 12 35 1.8E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01245 c79a1f8985aa57e24321ceba253a26c2 409 PRINTS PR00166 Aromatic amino acid permease signature 187 209 1.8E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01245 c79a1f8985aa57e24321ceba253a26c2 409 PRINTS PR00166 Aromatic amino acid permease signature 85 105 1.8E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01245 c79a1f8985aa57e24321ceba253a26c2 409 PRINTS PR00166 Aromatic amino acid permease signature 287 306 1.8E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01245 c79a1f8985aa57e24321ceba253a26c2 409 PRINTS PR00166 Aromatic amino acid permease signature 321 339 1.8E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01245 c79a1f8985aa57e24321ceba253a26c2 409 PRINTS PR00166 Aromatic amino acid permease signature 39 58 1.8E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01245 c79a1f8985aa57e24321ceba253a26c2 409 PRINTS PR00166 Aromatic amino acid permease signature 153 173 1.8E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01245 c79a1f8985aa57e24321ceba253a26c2 409 PRINTS PR00166 Aromatic amino acid permease signature 226 245 1.8E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01245 c79a1f8985aa57e24321ceba253a26c2 409 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 19 35 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CF65_01245 c79a1f8985aa57e24321ceba253a26c2 409 Pfam PF03222 Tryptophan/tyrosine permease family 4 395 2.5E-127 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CF65_02491 7db0d04e35c8c1440c772358f75c4feb 751 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 7 745 33.44 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02491 7db0d04e35c8c1440c772358f75c4feb 751 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 11 744 0.0 T 14-10-2018 CF65_02491 7db0d04e35c8c1440c772358f75c4feb 751 Gene3D G3DSA:3.30.1360.40 241 334 1.2E-176 T 14-10-2018 CF65_02491 7db0d04e35c8c1440c772358f75c4feb 751 SUPERFAMILY SSF101904 500 742 4.45E-48 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CF65_02491 7db0d04e35c8c1440c772358f75c4feb 751 SMART SM00434 14 464 9.5E-241 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_02491 7db0d04e35c8c1440c772358f75c4feb 751 SUPERFAMILY SSF56719 34 486 2.49E-154 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CF65_02491 7db0d04e35c8c1440c772358f75c4feb 751 Gene3D G3DSA:1.10.268.10 372 457 1.2E-176 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CF65_02491 7db0d04e35c8c1440c772358f75c4feb 751 Gene3D G3DSA:2.120.10.90 503 746 3.7E-10 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CF65_02491 7db0d04e35c8c1440c772358f75c4feb 751 Gene3D G3DSA:3.90.199.10 35 484 1.2E-176 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CF65_02491 7db0d04e35c8c1440c772358f75c4feb 751 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 698 2.3E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CF65_02491 7db0d04e35c8c1440c772358f75c4feb 751 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 636 0.0034 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CF65_02491 7db0d04e35c8c1440c772358f75c4feb 751 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 35 471 3.3E-136 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_01465 0ab00e5edcbf52e9a74c762ffb7019c4 332 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 2 117 2.8E-40 T 14-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CF65_01465 0ab00e5edcbf52e9a74c762ffb7019c4 332 SUPERFAMILY SSF53062 1 132 2.22E-34 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CF65_01465 0ab00e5edcbf52e9a74c762ffb7019c4 332 SUPERFAMILY SSF52728 171 330 4.84E-54 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CF65_01465 0ab00e5edcbf52e9a74c762ffb7019c4 332 Pfam PF03830 PTS system sorbose subfamily IIB component 172 318 3.0E-53 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CF65_01465 0ab00e5edcbf52e9a74c762ffb7019c4 332 Gene3D G3DSA:3.40.35.10 167 330 1.5E-57 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CF65_01465 0ab00e5edcbf52e9a74c762ffb7019c4 332 Gene3D G3DSA:3.40.50.510 2 134 2.9E-38 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CF65_01465 0ab00e5edcbf52e9a74c762ffb7019c4 332 Pfam PF03610 PTS system fructose IIA component 5 117 1.2E-33 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CF65_01465 0ab00e5edcbf52e9a74c762ffb7019c4 332 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 172 319 9.4E-54 T 14-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CF65_01489 5f52300fae7f57ae284ea6955dea87c6 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 14.163 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01489 5f52300fae7f57ae284ea6955dea87c6 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.8E-5 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01489 5f52300fae7f57ae284ea6955dea87c6 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.8E-5 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01489 5f52300fae7f57ae284ea6955dea87c6 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.8E-5 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01489 5f52300fae7f57ae284ea6955dea87c6 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 9.0E-31 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CF65_01489 5f52300fae7f57ae284ea6955dea87c6 84 Pfam PF00137 ATP synthase subunit C 10 72 1.1E-8 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CF65_01489 5f52300fae7f57ae284ea6955dea87c6 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01489 5f52300fae7f57ae284ea6955dea87c6 84 SUPERFAMILY SSF81333 3 78 9.68E-18 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily CF65_01489 5f52300fae7f57ae284ea6955dea87c6 84 Gene3D G3DSA:1.20.20.10 1 77 2.5E-26 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_02269 dc7362676cb060361c77508dfd1fd664 176 SUPERFAMILY SSF54637 11 173 8.2E-55 T 14-10-2018 IPR029069 HotDog domain superfamily CF65_02269 dc7362676cb060361c77508dfd1fd664 176 Gene3D G3DSA:3.10.129.10 7 176 2.4E-61 T 14-10-2018 CF65_02269 dc7362676cb060361c77508dfd1fd664 176 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 6 176 50.592 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CF65_02269 dc7362676cb060361c77508dfd1fd664 176 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 9 176 9.9E-93 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CF65_02269 dc7362676cb060361c77508dfd1fd664 176 Pfam PF07977 FabA-like domain 33 162 8.1E-53 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CF65_01359 10579f05126d935c619d0f36cc678552 182 Pfam PF03695 Uncharacterised protein family (UPF0149) 8 172 2.0E-39 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 CF65_01359 10579f05126d935c619d0f36cc678552 182 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 5 167 4.6E-26 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 CF65_01359 10579f05126d935c619d0f36cc678552 182 SUPERFAMILY SSF101327 4 171 2.22E-50 T 14-10-2018 IPR036255 YgfB-like superfamily CF65_01359 10579f05126d935c619d0f36cc678552 182 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 2 180 32.617 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 CF65_01359 10579f05126d935c619d0f36cc678552 182 Gene3D G3DSA:1.20.120.740 1 182 1.3E-60 T 14-10-2018 CF65_00397 ed5242159d5493af1ffc56f30b69d089 447 SUPERFAMILY SSF102114 120 375 1.09E-53 T 14-10-2018 CF65_00397 ed5242159d5493af1ffc56f30b69d089 447 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 9 447 60.447 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CF65_00397 ed5242159d5493af1ffc56f30b69d089 447 SMART SM00729 141 370 2.2E-56 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CF65_00397 ed5242159d5493af1ffc56f30b69d089 447 Gene3D G3DSA:2.40.50.140 385 447 5.2E-23 T 14-10-2018 CF65_00397 ed5242159d5493af1ffc56f30b69d089 447 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 145 165 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CF65_00397 ed5242159d5493af1ffc56f30b69d089 447 Pfam PF00919 Uncharacterized protein family UPF0004 12 96 1.2E-20 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CF65_00397 ed5242159d5493af1ffc56f30b69d089 447 Gene3D G3DSA:3.40.50.12160 10 134 9.4E-29 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily CF65_00397 ed5242159d5493af1ffc56f30b69d089 447 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 11 445 4.5E-186 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CF65_00397 ed5242159d5493af1ffc56f30b69d089 447 Pfam PF04055 Radical SAM superfamily 147 328 1.1E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CF65_00397 ed5242159d5493af1ffc56f30b69d089 447 Gene3D G3DSA:3.80.30.20 139 384 5.5E-74 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CF65_00397 ed5242159d5493af1ffc56f30b69d089 447 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 12 445 2.7E-109 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CF65_00279 7c2d35cc283611ba15e4dee713d73e1c 391 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 239 248 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 CF65_00279 7c2d35cc283611ba15e4dee713d73e1c 391 Pfam PF00155 Aminotransferase class I and II 39 384 2.4E-59 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CF65_00279 7c2d35cc283611ba15e4dee713d73e1c 391 Gene3D G3DSA:3.40.640.10 56 288 3.0E-119 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_00279 7c2d35cc283611ba15e4dee713d73e1c 391 Gene3D G3DSA:3.90.1150.10 40 382 3.0E-119 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_00279 7c2d35cc283611ba15e4dee713d73e1c 391 SUPERFAMILY SSF53383 6 385 3.62E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00415 a3ee09c9cebdf282af2549e553250795 345 Pfam PF09383 NIL domain 269 340 1.3E-18 T 14-10-2018 IPR018449 NIL domain CF65_00415 a3ee09c9cebdf282af2549e553250795 345 SUPERFAMILY SSF55021 248 344 1.26E-20 T 14-10-2018 CF65_00415 a3ee09c9cebdf282af2549e553250795 345 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_00415 a3ee09c9cebdf282af2549e553250795 345 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 344 2.0E-193 T 14-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 CF65_00415 a3ee09c9cebdf282af2549e553250795 345 Gene3D G3DSA:3.40.50.300 1 232 3.0E-74 T 14-10-2018 CF65_00415 a3ee09c9cebdf282af2549e553250795 345 Pfam PF00005 ABC transporter 21 169 5.6E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_00415 a3ee09c9cebdf282af2549e553250795 345 SMART SM00930 266 341 3.7E-23 T 14-10-2018 IPR018449 NIL domain CF65_00415 a3ee09c9cebdf282af2549e553250795 345 Gene3D G3DSA:3.30.70.260 233 344 2.1E-31 T 14-10-2018 CF65_00415 a3ee09c9cebdf282af2549e553250795 345 SUPERFAMILY SSF52540 1 240 1.33E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00415 a3ee09c9cebdf282af2549e553250795 345 SMART SM00382 30 217 1.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01608 9218668a7d86ad77c664885600538f58 195 Pfam PF01063 Amino-transferase class IV 101 192 8.3E-14 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CF65_01608 9218668a7d86ad77c664885600538f58 195 Gene3D G3DSA:3.30.470.10 1 84 3.9E-27 T 14-10-2018 CF65_01608 9218668a7d86ad77c664885600538f58 195 Gene3D G3DSA:3.20.10.10 85 193 4.0E-29 T 14-10-2018 CF65_01608 9218668a7d86ad77c664885600538f58 195 SUPERFAMILY SSF56752 3 193 1.18E-28 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CF65_00186 fb2124423340055dd7b2139153ec1773 333 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 9 315 1.1E-104 T 14-10-2018 CF65_00186 fb2124423340055dd7b2139153ec1773 333 SMART SM00922 123 218 4.6E-10 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CF65_00186 fb2124423340055dd7b2139153ec1773 333 SUPERFAMILY SSF51604 111 316 1.57E-49 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CF65_00186 fb2124423340055dd7b2139153ec1773 333 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 6 326 21.728 T 14-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 CF65_00186 fb2124423340055dd7b2139153ec1773 333 Gene3D G3DSA:3.30.390.10 6 310 1.3E-126 T 14-10-2018 IPR029017 Enolase-like, N-terminal CF65_00186 fb2124423340055dd7b2139153ec1773 333 Pfam PF13378 Enolase C-terminal domain-like 132 275 1.8E-13 T 14-10-2018 IPR029065 Enolase C-terminal domain-like CF65_00186 fb2124423340055dd7b2139153ec1773 333 SUPERFAMILY SSF54826 4 107 1.33E-27 T 14-10-2018 CF65_00186 fb2124423340055dd7b2139153ec1773 333 Gene3D G3DSA:3.20.20.120 106 303 1.3E-126 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CF65_00207 0de48811cad6f4a7433b147b9f767eca 502 Gene3D G3DSA:3.40.50.300 257 501 5.5E-46 T 14-10-2018 CF65_00207 0de48811cad6f4a7433b147b9f767eca 502 Pfam PF00005 ABC transporter 270 423 2.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_00207 0de48811cad6f4a7433b147b9f767eca 502 SUPERFAMILY SSF52540 4 232 1.78E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00207 0de48811cad6f4a7433b147b9f767eca 502 Gene3D G3DSA:3.40.50.300 1 241 2.6E-54 T 14-10-2018 CF65_00207 0de48811cad6f4a7433b147b9f767eca 502 SMART SM00382 30 249 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00207 0de48811cad6f4a7433b147b9f767eca 502 SMART SM00382 278 472 1.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00207 0de48811cad6f4a7433b147b9f767eca 502 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_00207 0de48811cad6f4a7433b147b9f767eca 502 SUPERFAMILY SSF52540 251 481 5.72E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00207 0de48811cad6f4a7433b147b9f767eca 502 Pfam PF00005 ABC transporter 21 170 9.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01032 827acbcad6331447c5f0ee33eda1944a 411 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 409 35.54 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 CF65_01032 827acbcad6331447c5f0ee33eda1944a 411 Pfam PF03116 NQR2, RnfD, RnfE family 41 402 3.6E-106 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 CF65_01032 827acbcad6331447c5f0ee33eda1944a 411 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 405 6.0E-201 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 CF65_01032 827acbcad6331447c5f0ee33eda1944a 411 PIRSF PIRSF016055 1 410 1.9E-191 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 CF65_00185 85d30faf312828bee9e494267242e06e 158 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 19 144 2.0E-55 T 14-10-2018 CF65_00185 85d30faf312828bee9e494267242e06e 158 Pfam PF01220 Dehydroquinase class II 6 142 2.5E-59 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CF65_00185 85d30faf312828bee9e494267242e06e 158 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CF65_00185 85d30faf312828bee9e494267242e06e 158 PIRSF PIRSF001399 3 149 1.2E-58 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CF65_00185 85d30faf312828bee9e494267242e06e 158 Gene3D G3DSA:3.40.50.9100 5 157 4.1E-64 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CF65_00185 85d30faf312828bee9e494267242e06e 158 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 7 145 2.9E-62 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CF65_00185 85d30faf312828bee9e494267242e06e 158 SUPERFAMILY SSF52304 6 151 4.58E-60 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CF65_00185 85d30faf312828bee9e494267242e06e 158 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 158 70.246 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CF65_02328 ed74f30e613697b0f82945f3d9b69807 119 Pfam PF13466 STAS domain 20 106 3.5E-15 T 14-10-2018 IPR002645 STAS domain CF65_02328 ed74f30e613697b0f82945f3d9b69807 119 SUPERFAMILY SSF52091 8 113 5.69E-14 T 14-10-2018 IPR036513 STAS domain superfamily CF65_02328 ed74f30e613697b0f82945f3d9b69807 119 Gene3D G3DSA:3.30.750.24 5 116 3.9E-10 T 14-10-2018 IPR036513 STAS domain superfamily CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 SUPERFAMILY SSF50104 127 181 5.52E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 SMART SM00739 128 155 3.2E-5 T 14-10-2018 IPR005824 KOW CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 Pfam PF00467 KOW motif 131 163 5.8E-7 T 14-10-2018 IPR005824 KOW CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 10 181 1.3E-68 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 Gene3D G3DSA:2.30.30.30 123 181 1.5E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 ProSitePatterns PS01014 Transcription termination factor nusG signature. 165 174 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 7 182 24.401 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 Gene3D G3DSA:3.30.70.940 2 122 4.8E-45 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 SMART SM00738 7 116 1.2E-44 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 Pfam PF02357 Transcription termination factor nusG 8 112 1.8E-26 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 PRINTS PR00338 Transcription termination factor NUSG signature 158 174 5.0E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 PRINTS PR00338 Transcription termination factor NUSG signature 62 74 5.0E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 PRINTS PR00338 Transcription termination factor NUSG signature 140 155 5.0E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CF65_00345 1e362bb825863e77eb8d185b0ea7f801 183 SUPERFAMILY SSF82679 7 119 1.19E-38 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CF65_00511 acd23286383ca1855e235e84e9cfd778 173 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 1 172 7.7E-52 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CF65_00511 acd23286383ca1855e235e84e9cfd778 173 Pfam PF04973 Nicotinamide mononucleotide transporter 1 168 8.6E-36 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 SUPERFAMILY SSF50156 229 333 5.26E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 Gene3D G3DSA:2.40.10.10 48 240 2.4E-65 T 14-10-2018 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 339 4.8E-147 T 14-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 Pfam PF13365 Trypsin-like peptidase domain 72 207 5.9E-30 T 14-10-2018 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 Gene3D G3DSA:2.30.42.10 243 340 8.9E-21 T 14-10-2018 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 Gene3D G3DSA:2.40.10.10 137 228 2.4E-65 T 14-10-2018 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 PRINTS PR00834 HtrA/DegQ protease family signature 178 195 5.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 PRINTS PR00834 HtrA/DegQ protease family signature 81 93 5.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 PRINTS PR00834 HtrA/DegQ protease family signature 142 166 5.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 PRINTS PR00834 HtrA/DegQ protease family signature 284 296 5.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 PRINTS PR00834 HtrA/DegQ protease family signature 102 122 5.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 5.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 SUPERFAMILY SSF50494 19 253 4.99E-56 T 14-10-2018 IPR009003 Peptidase S1, PA clan CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 SMART SM00228 248 326 1.5E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 CF65_01789 1c5cb2fdc44e8cafb24e1afa83d67402 342 Pfam PF13180 PDZ domain 263 333 2.2E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.0E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 1.0E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 397 476 1.4E-25 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 SUPERFAMILY SSF52540 194 483 9.24E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 SUPERFAMILY SSF52540 5 171 3.8E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 Gene3D G3DSA:3.40.50.300 1 162 5.1E-43 T 14-10-2018 CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 Gene3D G3DSA:3.40.50.300 216 394 1.7E-49 T 14-10-2018 CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 387 3.1E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 160 1.4E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 SMART SM00173 219 394 0.003 T 14-10-2018 CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 Gene3D G3DSA:3.30.300.20 397 479 1.5E-19 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 Hamap MF_00195 GTPase Der [der]. 3 480 38.632 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 SMART SM00382 220 363 0.44 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 SMART SM00382 2 143 1.3 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 477 6.7E-177 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 Pfam PF01926 50S ribosome-binding GTPase 223 341 7.4E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 Pfam PF01926 50S ribosome-binding GTPase 6 121 8.8E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_00689 80caaaf989ee3ee2be4091a3e2b2711e 510 PIRSF PIRSF006485 2 485 2.1E-186 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CF65_01284 977e6782e037b5238958564305184bd8 547 SUPERFAMILY SSF52029 184 376 2.62E-84 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily CF65_01284 977e6782e037b5238958564305184bd8 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.1E-90 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CF65_01284 977e6782e037b5238958564305184bd8 547 Gene3D G3DSA:3.50.7.10 192 372 1.7E-239 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily CF65_01284 977e6782e037b5238958564305184bd8 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CF65_01284 977e6782e037b5238958564305184bd8 547 PRINTS PR00298 60kDa chaperonin signature 27 53 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CF65_01284 977e6782e037b5238958564305184bd8 547 PRINTS PR00298 60kDa chaperonin signature 83 110 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CF65_01284 977e6782e037b5238958564305184bd8 547 PRINTS PR00298 60kDa chaperonin signature 350 375 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CF65_01284 977e6782e037b5238958564305184bd8 547 PRINTS PR00298 60kDa chaperonin signature 398 419 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CF65_01284 977e6782e037b5238958564305184bd8 547 PRINTS PR00298 60kDa chaperonin signature 268 291 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CF65_01284 977e6782e037b5238958564305184bd8 547 Gene3D G3DSA:3.30.260.10 136 410 1.7E-239 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CF65_01284 977e6782e037b5238958564305184bd8 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.8E-255 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CF65_01284 977e6782e037b5238958564305184bd8 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.815 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CF65_01284 977e6782e037b5238958564305184bd8 547 SUPERFAMILY SSF54849 137 203 1.1E-22 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CF65_01284 977e6782e037b5238958564305184bd8 547 SUPERFAMILY SSF48592 7 521 2.75E-76 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily CF65_01284 977e6782e037b5238958564305184bd8 547 Gene3D G3DSA:1.10.560.10 8 521 1.7E-239 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily CF65_00093 8264993c7c285d7eaef2b98b4c380b50 454 Pfam PF03315 Serine dehydratase beta chain 3 155 8.0E-58 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CF65_00093 8264993c7c285d7eaef2b98b4c380b50 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 5.1E-227 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CF65_00093 8264993c7c285d7eaef2b98b4c380b50 454 SUPERFAMILY SSF143548 16 158 9.94E-45 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 CF65_00093 8264993c7c285d7eaef2b98b4c380b50 454 Gene3D G3DSA:3.30.1330.90 10 159 3.4E-53 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 CF65_00093 8264993c7c285d7eaef2b98b4c380b50 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 3.1E-96 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit CF65_02173 aa3d539437cb4defebfe7675f5697c8b 515 Pfam PF04715 Anthranilate synthase component I, N terminal region 18 190 1.5E-14 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CF65_02173 aa3d539437cb4defebfe7675f5697c8b 515 Pfam PF00425 chorismate binding enzyme 238 498 3.1E-83 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CF65_02173 aa3d539437cb4defebfe7675f5697c8b 515 PRINTS PR00095 Anthranilate synthase component I signature 360 373 2.5E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CF65_02173 aa3d539437cb4defebfe7675f5697c8b 515 PRINTS PR00095 Anthranilate synthase component I signature 455 469 2.5E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CF65_02173 aa3d539437cb4defebfe7675f5697c8b 515 PRINTS PR00095 Anthranilate synthase component I signature 440 454 2.5E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CF65_02173 aa3d539437cb4defebfe7675f5697c8b 515 PRINTS PR00095 Anthranilate synthase component I signature 346 359 2.5E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CF65_02173 aa3d539437cb4defebfe7675f5697c8b 515 SUPERFAMILY SSF56322 6 506 9.81E-151 T 14-10-2018 IPR005801 ADC synthase GO:0009058 CF65_02173 aa3d539437cb4defebfe7675f5697c8b 515 Gene3D G3DSA:3.60.120.10 2 514 1.0E-171 T 14-10-2018 IPR005801 ADC synthase GO:0009058 CF65_02173 aa3d539437cb4defebfe7675f5697c8b 515 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 15 510 1.5E-242 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CF65_02173 aa3d539437cb4defebfe7675f5697c8b 515 PIRSF PIRSF001373 1 515 3.2E-242 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CF65_01626 11a828e3ef5a7a87d3d14d5573f154b4 141 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 11 137 4.1E-44 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 CF65_01626 11a828e3ef5a7a87d3d14d5573f154b4 141 Pfam PF01029 NusB family 12 136 1.8E-34 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CF65_01626 11a828e3ef5a7a87d3d14d5573f154b4 141 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 9 140 22.462 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 CF65_01626 11a828e3ef5a7a87d3d14d5573f154b4 141 Gene3D G3DSA:1.10.940.10 5 141 2.1E-48 T 14-10-2018 IPR035926 NusB-like superfamily CF65_01626 11a828e3ef5a7a87d3d14d5573f154b4 141 SUPERFAMILY SSF48013 8 137 1.2E-41 T 14-10-2018 IPR035926 NusB-like superfamily CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 168 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 6 293 64.311 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 43 60 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 SMART SM01130 6 295 8.2E-137 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 Gene3D G3DSA:3.20.20.70 6 297 1.0E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 PIRSF PIRSF001365 4 297 1.7E-93 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 Pfam PF00701 Dihydrodipicolinate synthetase family 7 293 1.5E-120 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 293 1.0E-122 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 SUPERFAMILY SSF51569 7 295 7.22E-99 T 14-10-2018 CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 2.4E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 2.4E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 2.4E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02349 a7f3f7d8ed61ecec36c1447090be00de 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 2.4E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_00799 0a91c78560aa7d95f2929ce081c6b330 255 SUPERFAMILY SSF52540 3 228 2.61E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00799 0a91c78560aa7d95f2929ce081c6b330 255 SMART SM00382 27 214 3.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00799 0a91c78560aa7d95f2929ce081c6b330 255 Pfam PF00005 ABC transporter 19 166 6.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_00799 0a91c78560aa7d95f2929ce081c6b330 255 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_00799 0a91c78560aa7d95f2929ce081c6b330 255 Gene3D G3DSA:3.40.50.300 1 255 1.8E-67 T 14-10-2018 CF65_00144 1a4b011a5116786958ccf53a72833820 352 Gene3D G3DSA:1.10.10.2840 229 351 2.7E-18 T 14-10-2018 CF65_00144 1a4b011a5116786958ccf53a72833820 352 Pfam PF13556 PucR C-terminal helix-turn-helix domain 293 348 3.2E-20 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain CF65_00144 1a4b011a5116786958ccf53a72833820 352 Pfam PF05651 Putative sugar diacid recognition 1 122 1.2E-43 T 14-10-2018 IPR008599 Putative sugar diacid recognition CF65_02254 87db45d40aab4b05147eeebf3d3b53d2 485 PIRSF PIRSF002457 8 485 3.5E-130 T 14-10-2018 IPR030676 Citrate carrier CitT-related CF65_02254 87db45d40aab4b05147eeebf3d3b53d2 485 Pfam PF00939 Sodium:sulfate symporter transmembrane region 16 485 2.0E-130 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CF65_02254 87db45d40aab4b05147eeebf3d3b53d2 485 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 34 478 1.1E-104 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 PIRSF PIRSF000130 1 488 1.5E-198 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 SMART SM01240 8 474 0.0 T 14-10-2018 CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 474 2.6E-161 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 296 308 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 SUPERFAMILY SSF51412 4 478 2.62E-126 T 14-10-2018 CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 Gene3D G3DSA:3.20.20.70 1 487 2.4E-210 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 9 455 4.2E-195 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 SMART SM00116 97 145 4.2E-7 T 14-10-2018 IPR000644 CBS domain CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 SMART SM00116 159 207 6.0E-9 T 14-10-2018 IPR000644 CBS domain CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 SUPERFAMILY SSF54631 96 202 9.03E-27 T 14-10-2018 CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 9 487 82.76 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 Pfam PF00571 CBS domain 96 141 1.3E-7 T 14-10-2018 IPR000644 CBS domain CF65_00629 ddc6e73985012e8b90e98962e0b5f1e9 488 Pfam PF00571 CBS domain 150 201 9.4E-8 T 14-10-2018 IPR000644 CBS domain CF65_00973 8971c0cc840d248ffcafc2c5f1e8c14d 265 SUPERFAMILY SSF100950 89 246 1.08E-32 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_00973 8971c0cc840d248ffcafc2c5f1e8c14d 265 Pfam PF00455 DeoR C terminal sensor domain 89 245 1.3E-46 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain CF65_00973 8971c0cc840d248ffcafc2c5f1e8c14d 265 Pfam PF08220 DeoR-like helix-turn-helix domain 21 74 1.0E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_00973 8971c0cc840d248ffcafc2c5f1e8c14d 265 ProSitePatterns PS00894 DeoR-type HTH domain signature. 21 55 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CF65_00973 8971c0cc840d248ffcafc2c5f1e8c14d 265 SMART SM00420 21 73 2.2E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_00973 8971c0cc840d248ffcafc2c5f1e8c14d 265 Gene3D G3DSA:1.10.10.10 6 68 1.2E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00973 8971c0cc840d248ffcafc2c5f1e8c14d 265 SMART SM01134 85 246 3.2E-62 T 14-10-2018 CF65_00973 8971c0cc840d248ffcafc2c5f1e8c14d 265 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 53 71 3.3E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_00973 8971c0cc840d248ffcafc2c5f1e8c14d 265 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 53 3.3E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_00973 8971c0cc840d248ffcafc2c5f1e8c14d 265 SUPERFAMILY SSF46785 19 78 6.3E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_02261 b1f0a793b55cbad6ef4457e77b1a7e3f 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.041 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CF65_02261 b1f0a793b55cbad6ef4457e77b1a7e3f 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CF65_02261 b1f0a793b55cbad6ef4457e77b1a7e3f 130 Gene3D G3DSA:3.30.230.10 1 130 8.0E-53 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02261 b1f0a793b55cbad6ef4457e77b1a7e3f 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.5E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CF65_02261 b1f0a793b55cbad6ef4457e77b1a7e3f 130 SUPERFAMILY SSF54211 5 130 1.71E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_01456 c4d2e5c5c81ccffeeb36fabc938b6890 503 Gene3D G3DSA:3.40.50.300 1 239 1.3E-53 T 14-10-2018 CF65_01456 c4d2e5c5c81ccffeeb36fabc938b6890 503 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 3 501 2.6E-268 T 14-10-2018 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 CF65_01456 c4d2e5c5c81ccffeeb36fabc938b6890 503 Pfam PF00005 ABC transporter 277 432 5.8E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01456 c4d2e5c5c81ccffeeb36fabc938b6890 503 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01456 c4d2e5c5c81ccffeeb36fabc938b6890 503 SUPERFAMILY SSF52540 257 485 2.92E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01456 c4d2e5c5c81ccffeeb36fabc938b6890 503 SMART SM00382 285 481 9.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01456 c4d2e5c5c81ccffeeb36fabc938b6890 503 SMART SM00382 28 218 6.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01456 c4d2e5c5c81ccffeeb36fabc938b6890 503 SUPERFAMILY SSF52540 3 229 2.5E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01456 c4d2e5c5c81ccffeeb36fabc938b6890 503 Gene3D G3DSA:3.40.50.300 245 502 1.1E-40 T 14-10-2018 CF65_01456 c4d2e5c5c81ccffeeb36fabc938b6890 503 Pfam PF00005 ABC transporter 19 170 2.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 2.0E-198 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 SUPERFAMILY SSF55973 233 382 3.18E-71 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 SUPERFAMILY SSF55973 3 109 2.28E-46 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 100 5.8E-42 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 Gene3D G3DSA:3.30.300.10 5 233 1.0E-175 T 14-10-2018 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 3.1E-43 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 Gene3D G3DSA:3.30.300.10 11 270 1.0E-175 T 14-10-2018 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 Gene3D G3DSA:3.30.300.10 103 372 1.0E-175 T 14-10-2018 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 PIRSF PIRSF000497 1 382 2.6E-173 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 SUPERFAMILY SSF55973 111 232 3.85E-49 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 1.5E-70 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CF65_00089 f7e2cebd30e1ddbe8d6be894834239ec 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.135 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CF65_02873 94ada63ed4e846ca128e4774bb61fd37 461 Gene3D G3DSA:3.40.50.12160 1 121 2.0E-26 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily CF65_02873 94ada63ed4e846ca128e4774bb61fd37 461 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 1 427 72.026 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CF65_02873 94ada63ed4e846ca128e4774bb61fd37 461 Pfam PF00919 Uncharacterized protein family UPF0004 1 91 2.0E-22 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CF65_02873 94ada63ed4e846ca128e4774bb61fd37 461 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 1 427 1.5E-198 T 14-10-2018 CF65_02873 94ada63ed4e846ca128e4774bb61fd37 461 SMART SM00729 134 354 1.6E-64 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CF65_02873 94ada63ed4e846ca128e4774bb61fd37 461 Gene3D G3DSA:3.80.30.20 132 364 1.9E-82 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CF65_02873 94ada63ed4e846ca128e4774bb61fd37 461 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 138 158 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CF65_02873 94ada63ed4e846ca128e4774bb61fd37 461 Pfam PF04055 Radical SAM superfamily 138 312 7.2E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CF65_02873 94ada63ed4e846ca128e4774bb61fd37 461 SUPERFAMILY SSF102114 116 359 1.27E-62 T 14-10-2018 CF65_02873 94ada63ed4e846ca128e4774bb61fd37 461 Pfam PF01938 TRAM domain 365 427 8.6E-20 T 14-10-2018 IPR002792 TRAM domain CF65_02873 94ada63ed4e846ca128e4774bb61fd37 461 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 1 424 5.6E-148 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CF65_00502 35dfd3ce662308db2e30fe42a5670e7f 160 Gene3D G3DSA:3.40.50.10140 2 130 2.7E-5 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily CF65_00502 35dfd3ce662308db2e30fe42a5670e7f 160 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 3 103 3.2E-27 T 14-10-2018 IPR015032 MTH538 TIR-like domain CF65_00502 35dfd3ce662308db2e30fe42a5670e7f 160 SUPERFAMILY SSF52206 21 101 8.76E-15 T 14-10-2018 IPR036490 Hypothetical protein MTH538 superfamily CF65_01496 f1a2ec3d78a2e66a20d9b99ca47cde6f 629 SUPERFAMILY SSF51905 6 261 6.49E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01496 f1a2ec3d78a2e66a20d9b99ca47cde6f 629 Pfam PF01134 Glucose inhibited division protein A 8 399 1.0E-166 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CF65_01496 f1a2ec3d78a2e66a20d9b99ca47cde6f 629 Gene3D G3DSA:1.10.10.1800 459 550 4.5E-31 T 14-10-2018 CF65_01496 f1a2ec3d78a2e66a20d9b99ca47cde6f 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CF65_01496 f1a2ec3d78a2e66a20d9b99ca47cde6f 629 Gene3D G3DSA:3.50.50.60 296 458 2.6E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01496 f1a2ec3d78a2e66a20d9b99ca47cde6f 629 Gene3D G3DSA:3.50.50.60 1 233 1.1E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01496 f1a2ec3d78a2e66a20d9b99ca47cde6f 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.323 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CF65_01496 f1a2ec3d78a2e66a20d9b99ca47cde6f 629 SMART SM01228 546 617 4.6E-44 T 14-10-2018 CF65_01496 f1a2ec3d78a2e66a20d9b99ca47cde6f 629 Gene3D G3DSA:1.10.150.570 569 622 1.9E-23 T 14-10-2018 CF65_01496 f1a2ec3d78a2e66a20d9b99ca47cde6f 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CF65_01496 f1a2ec3d78a2e66a20d9b99ca47cde6f 629 Pfam PF13932 GidA associated domain 402 615 3.7E-76 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CF65_01496 f1a2ec3d78a2e66a20d9b99ca47cde6f 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 4.2E-300 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CF65_01573 1b631f03f7caebb7212076fdd563ac35 538 Gene3D G3DSA:3.40.190.10 212 522 1.9E-133 T 14-10-2018 CF65_01573 1b631f03f7caebb7212076fdd563ac35 538 SUPERFAMILY SSF53850 10 532 1.21E-118 T 14-10-2018 CF65_01573 1b631f03f7caebb7212076fdd563ac35 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 53 453 5.1E-82 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain CF65_01573 1b631f03f7caebb7212076fdd563ac35 538 Gene3D G3DSA:3.10.105.10 292 510 1.9E-133 T 14-10-2018 CF65_01573 1b631f03f7caebb7212076fdd563ac35 538 Gene3D G3DSA:3.90.76.10 20 211 1.9E-133 T 14-10-2018 CF65_01573 1b631f03f7caebb7212076fdd563ac35 538 PIRSF PIRSF002741 2 535 1.8E-88 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CF65_01573 1b631f03f7caebb7212076fdd563ac35 538 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 58 80 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site CF65_02507 622b33f6f7e10c803a5010c1c25759f7 290 Gene3D G3DSA:3.30.1380.10 28 284 7.2E-95 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CF65_02507 622b33f6f7e10c803a5010c1c25759f7 290 Pfam PF03411 Penicillin-insensitive murein endopeptidase 47 280 2.1E-97 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CF65_02507 622b33f6f7e10c803a5010c1c25759f7 290 SUPERFAMILY SSF55166 32 284 1.88E-103 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CF65_02507 622b33f6f7e10c803a5010c1c25759f7 290 PIRSF PIRSF018455 1 290 1.3E-123 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 SUPERFAMILY SSF47384 108 187 4.71E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 Gene3D G3DSA:3.40.50.2300 344 477 6.3E-32 T 14-10-2018 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 SUPERFAMILY SSF52172 358 482 1.99E-30 T 14-10-2018 IPR011006 CheY-like superfamily CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 Gene3D G3DSA:1.10.287.130 88 184 1.3E-21 T 14-10-2018 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 Pfam PF01627 Hpt domain 523 610 5.6E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 Gene3D G3DSA:1.10.287.970 1 87 1.3E-33 T 14-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 SMART SM00388 121 186 1.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 2.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 2.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 322 2.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 341 2.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 SMART SM00073 509 612 1.0E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 Gene3D G3DSA:1.20.120.160 491 614 4.8E-24 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 Gene3D G3DSA:3.30.565.10 187 343 1.2E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 SUPERFAMILY SSF47226 499 613 2.75E-21 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 342 1.6E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 SUPERFAMILY SSF55874 175 341 5.89E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 185 2.4E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 SMART SM00448 359 475 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 PIRSF PIRSF003182 1 118 6.8E-38 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 PIRSF PIRSF003182 96 615 8.4E-199 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 SMART SM00387 233 344 1.3E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00757 b207887879b5b7f5695e96c3434c53d4 615 Pfam PF00072 Response regulator receiver domain 361 474 5.8E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 169 5.3E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 SUPERFAMILY SSF54211 217 382 4.74E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 SMART SM00387 27 173 6.9E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 Gene3D G3DSA:3.30.565.10 2 215 1.2E-76 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 582 596 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.2E-147 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 628 0.0 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 SMART SM00433 34 626 4.7E-214 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 Pfam PF00204 DNA gyrase B 218 384 7.5E-36 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 630 46.273 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 622 1.4E-23 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 Gene3D G3DSA:3.40.50.670 390 625 3.1E-93 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 SUPERFAMILY SSF55874 5 215 6.42E-67 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.3E-59 T 14-10-2018 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.3E-59 T 14-10-2018 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.3E-59 T 14-10-2018 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.3E-59 T 14-10-2018 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.3E-59 T 14-10-2018 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.3E-59 T 14-10-2018 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.3E-59 T 14-10-2018 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.3E-59 T 14-10-2018 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.3E-59 T 14-10-2018 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 Pfam PF01751 Toprim domain 413 521 2.0E-12 T 14-10-2018 IPR006171 TOPRIM domain CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 SUPERFAMILY SSF56719 388 623 1.02E-78 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CF65_02486 b378c8a00d9061195f0524db31c54ba1 632 Gene3D G3DSA:3.30.230.10 216 389 1.2E-53 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00592 573ffc336194e1aa8346e924141e126b 557 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 383 537 2.9E-46 T 14-10-2018 IPR006512 YidE/YbjL duplication CF65_00592 573ffc336194e1aa8346e924141e126b 557 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 170 9.1E-34 T 14-10-2018 IPR006512 YidE/YbjL duplication CF65_00592 573ffc336194e1aa8346e924141e126b 557 Pfam PF02080 TrkA-C domain 215 277 1.6E-6 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CF65_00592 573ffc336194e1aa8346e924141e126b 557 Pfam PF02080 TrkA-C domain 296 362 7.1E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CF65_00592 573ffc336194e1aa8346e924141e126b 557 Pfam PF06826 Predicted Permease Membrane Region 16 183 1.5E-42 T 14-10-2018 IPR006512 YidE/YbjL duplication CF65_00592 573ffc336194e1aa8346e924141e126b 557 Pfam PF06826 Predicted Permease Membrane Region 378 550 7.6E-47 T 14-10-2018 IPR006512 YidE/YbjL duplication CF65_00592 573ffc336194e1aa8346e924141e126b 557 Gene3D G3DSA:3.30.70.1450 201 278 1.0E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CF65_00592 573ffc336194e1aa8346e924141e126b 557 SUPERFAMILY SSF116726 210 275 1.44E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CF65_00592 573ffc336194e1aa8346e924141e126b 557 Hamap MF_01016 Putative transport protein YidE [yidE]. 6 557 55.903 T 14-10-2018 IPR023018 Transport protein YidE, putative CF65_00592 573ffc336194e1aa8346e924141e126b 557 SUPERFAMILY SSF116726 278 363 4.97E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CF65_00592 573ffc336194e1aa8346e924141e126b 557 Gene3D G3DSA:3.30.70.1450 293 367 6.0E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CF65_01694 87db898c73d9d53ea6b8d2ab1c587795 153 Gene3D G3DSA:3.40.930.10 1 152 2.1E-48 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CF65_01694 87db898c73d9d53ea6b8d2ab1c587795 153 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 6.4E-30 T 14-10-2018 IPR002178 PTS EIIA type-2 domain CF65_01694 87db898c73d9d53ea6b8d2ab1c587795 153 SUPERFAMILY SSF55804 3 148 1.44E-31 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CF65_01805 1a567bb1fe2568859dc6501cbc209951 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 25.559 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 CF65_01805 1a567bb1fe2568859dc6501cbc209951 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.1E-85 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 CF65_01805 1a567bb1fe2568859dc6501cbc209951 193 PIRSF PIRSF006102 1 193 7.3E-60 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CF65_01805 1a567bb1fe2568859dc6501cbc209951 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.1E-58 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CF65_01017 b9c4b482faa72341ac99a310833fd5b8 244 SUPERFAMILY SSF75217 75 243 1.57E-52 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases CF65_01017 b9c4b482faa72341ac99a310833fd5b8 244 PIRSF PIRSF015601 2 243 3.4E-55 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CF65_01017 b9c4b482faa72341ac99a310833fd5b8 244 Pfam PF04452 RNA methyltransferase 20 237 8.7E-75 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CF65_01017 b9c4b482faa72341ac99a310833fd5b8 244 Gene3D G3DSA:2.40.240.20 1 73 4.0E-24 T 14-10-2018 CF65_01017 b9c4b482faa72341ac99a310833fd5b8 244 SUPERFAMILY SSF88697 2 71 2.65E-18 T 14-10-2018 IPR015947 PUA-like superfamily CF65_01017 b9c4b482faa72341ac99a310833fd5b8 244 Gene3D G3DSA:3.40.1280.10 74 244 6.1E-66 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_01017 b9c4b482faa72341ac99a310833fd5b8 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 243 3.1E-88 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CF65_01078 d6bbb9eb72fbcc4ebd251c9097c56089 167 SUPERFAMILY SSF46955 32 147 3.19E-32 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily CF65_01078 d6bbb9eb72fbcc4ebd251c9097c56089 167 SMART SM00422 32 101 2.9E-29 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_01078 d6bbb9eb72fbcc4ebd251c9097c56089 167 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 33 44 4.2E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_01078 d6bbb9eb72fbcc4ebd251c9097c56089 167 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 68 88 4.2E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_01078 d6bbb9eb72fbcc4ebd251c9097c56089 167 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 57 4.2E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_01078 d6bbb9eb72fbcc4ebd251c9097c56089 167 ProSitePatterns PS00552 MerR-type HTH domain signature. 35 57 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_01078 d6bbb9eb72fbcc4ebd251c9097c56089 167 Pfam PF13411 MerR HTH family regulatory protein 32 99 6.0E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_01078 d6bbb9eb72fbcc4ebd251c9097c56089 167 Gene3D G3DSA:1.10.1660.10 29 154 3.5E-33 T 14-10-2018 CF65_00628 015a15ec365492ed53e66c7363ff7741 310 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 75 308 4.0E-67 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CF65_00628 015a15ec365492ed53e66c7363ff7741 310 SUPERFAMILY SSF50037 262 308 2.7E-8 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal CF65_00628 015a15ec365492ed53e66c7363ff7741 310 SUPERFAMILY SSF55681 65 253 2.2E-50 T 14-10-2018 CF65_00628 015a15ec365492ed53e66c7363ff7741 310 Gene3D G3DSA:3.30.930.10 59 261 2.2E-54 T 14-10-2018 CF65_00628 015a15ec365492ed53e66c7363ff7741 310 Pfam PF02237 Biotin protein ligase C terminal domain 263 308 1.0E-10 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CF65_00628 015a15ec365492ed53e66c7363ff7741 310 Pfam PF03099 Biotin/lipoate A/B protein ligase family 78 200 1.4E-17 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CF65_00628 015a15ec365492ed53e66c7363ff7741 310 Gene3D G3DSA:2.30.30.100 262 310 6.9E-13 T 14-10-2018 CF65_00241 6cb37f850438b1d7a3cd73d40d96a831 155 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 3.9E-62 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CF65_00241 6cb37f850438b1d7a3cd73d40d96a831 155 Gene3D G3DSA:3.20.20.70 4 155 5.4E-23 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_00241 6cb37f850438b1d7a3cd73d40d96a831 155 Pfam PF13353 4Fe-4S single cluster domain 12 151 4.2E-52 T 14-10-2018 CF65_00241 6cb37f850438b1d7a3cd73d40d96a831 155 PIRSF PIRSF000368 1 155 7.4E-60 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CF65_00241 6cb37f850438b1d7a3cd73d40d96a831 155 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CF65_00241 6cb37f850438b1d7a3cd73d40d96a831 155 SUPERFAMILY SSF102114 13 111 1.96E-8 T 14-10-2018 CF65_00091 bc923a896c97a42842b48940362a8115 166 Hamap MF_00746 Protein SprT [sprT]. 12 165 38.875 T 14-10-2018 IPR023483 Uncharacterised protein family SprT CF65_00091 bc923a896c97a42842b48940362a8115 166 Pfam PF10263 SprT-like family 25 118 2.3E-17 T 14-10-2018 IPR006640 SprT-like CF65_00091 bc923a896c97a42842b48940362a8115 166 Pfam PF17283 SprT-like zinc ribbon domain 125 163 3.7E-11 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain CF65_00091 bc923a896c97a42842b48940362a8115 166 SMART SM00731 16 165 1.3E-49 T 14-10-2018 IPR006640 SprT-like CF65_02534 942a87cbe21001f28728fc543d9dfaac 290 Gene3D G3DSA:3.30.830.10 112 290 5.0E-16 T 14-10-2018 CF65_02534 942a87cbe21001f28728fc543d9dfaac 290 SUPERFAMILY SSF63411 120 280 8.73E-14 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CF65_02534 942a87cbe21001f28728fc543d9dfaac 290 Pfam PF05193 Peptidase M16 inactive domain 57 221 5.0E-18 T 14-10-2018 IPR007863 Peptidase M16, C-terminal CF65_02292 980248184aa4d1898c981a56fea5cc00 132 Gene3D G3DSA:1.10.287.1050 1 82 5.6E-26 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 CF65_02292 980248184aa4d1898c981a56fea5cc00 132 SUPERFAMILY SSF81273 2 58 3.73E-16 T 14-10-2018 CF65_02292 980248184aa4d1898c981a56fea5cc00 132 Pfam PF00816 H-NS histone family 37 126 5.0E-19 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CF65_02292 980248184aa4d1898c981a56fea5cc00 132 Gene3D G3DSA:4.10.430.10 90 132 7.8E-22 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 CF65_02292 980248184aa4d1898c981a56fea5cc00 132 PIRSF PIRSF002096 1 132 3.0E-51 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CF65_02292 980248184aa4d1898c981a56fea5cc00 132 SUPERFAMILY SSF81273 91 132 2.24E-10 T 14-10-2018 CF65_02292 980248184aa4d1898c981a56fea5cc00 132 SMART SM00528 85 132 1.8E-21 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CF65_00948 15170e107352aec50342bc5ef6b60369 199 SUPERFAMILY SSF88946 17 101 5.1E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CF65_00948 15170e107352aec50342bc5ef6b60369 199 Pfam PF08281 Sigma-70, region 4 136 186 6.3E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CF65_00948 15170e107352aec50342bc5ef6b60369 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 190 2.5E-28 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CF65_00948 15170e107352aec50342bc5ef6b60369 199 Pfam PF04542 Sigma-70 region 2 17 83 8.0E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CF65_00948 15170e107352aec50342bc5ef6b60369 199 Gene3D G3DSA:1.10.1740.10 8 85 6.3E-17 T 14-10-2018 CF65_00948 15170e107352aec50342bc5ef6b60369 199 Gene3D G3DSA:1.10.10.10 129 192 1.4E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00948 15170e107352aec50342bc5ef6b60369 199 SUPERFAMILY SSF88659 126 191 5.61E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CF65_00948 15170e107352aec50342bc5ef6b60369 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 38 69 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CF65_00948 15170e107352aec50342bc5ef6b60369 199 TIGRFAM TIGR02943 Sig70_famx1: RNA polymerase sigma-70 factor, TIGR02943 family 11 198 2.0E-90 T 14-10-2018 IPR014289 RNA polymerase sigma-24-related CF65_00646 bf8b6b4c7712343b37df03f243c88d1d 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.538 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CF65_00646 bf8b6b4c7712343b37df03f243c88d1d 284 SUPERFAMILY SSF51569 3 278 8.15E-107 T 14-10-2018 CF65_00646 bf8b6b4c7712343b37df03f243c88d1d 284 Pfam PF00793 DAHP synthetase I family 9 275 1.1E-69 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CF65_00646 bf8b6b4c7712343b37df03f243c88d1d 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 5.5E-124 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CF65_00646 bf8b6b4c7712343b37df03f243c88d1d 284 Gene3D G3DSA:3.20.20.70 1 284 2.2E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_00840 243c61a6a3d51a5bcfced9fc6e431485 459 Gene3D G3DSA:3.90.190.20 317 459 2.0E-40 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CF65_00840 243c61a6a3d51a5bcfced9fc6e431485 459 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 454 33.02 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00840 243c61a6a3d51a5bcfced9fc6e431485 459 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 453 7.7E-143 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00840 243c61a6a3d51a5bcfced9fc6e431485 459 SUPERFAMILY SSF53244 318 453 1.04E-32 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CF65_00840 243c61a6a3d51a5bcfced9fc6e431485 459 SUPERFAMILY SSF63418 1 97 2.62E-24 T 14-10-2018 IPR035911 MurE/MurF, N-terminal CF65_00840 243c61a6a3d51a5bcfced9fc6e431485 459 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 394 4.2E-14 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CF65_00840 243c61a6a3d51a5bcfced9fc6e431485 459 Pfam PF01225 Mur ligase family, catalytic domain 25 97 2.8E-7 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CF65_00840 243c61a6a3d51a5bcfced9fc6e431485 459 Gene3D G3DSA:3.40.1390.10 1 81 3.4E-22 T 14-10-2018 CF65_00840 243c61a6a3d51a5bcfced9fc6e431485 459 SUPERFAMILY SSF53623 100 314 2.09E-54 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CF65_00840 243c61a6a3d51a5bcfced9fc6e431485 459 Pfam PF08245 Mur ligase middle domain 107 298 8.0E-49 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CF65_00840 243c61a6a3d51a5bcfced9fc6e431485 459 Gene3D G3DSA:3.40.1190.10 82 314 1.5E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CF65_02737 368b03e7047b2fd6ec743c267bed5387 226 Pfam PF01865 Protein of unknown function DUF47 7 224 5.5E-75 T 14-10-2018 IPR018445 Putative phosphate transport regulator CF65_02737 368b03e7047b2fd6ec743c267bed5387 226 Gene3D G3DSA:1.20.58.220 1 226 4.4E-63 T 14-10-2018 IPR038078 PhoU-like domain superfamily CF65_02737 368b03e7047b2fd6ec743c267bed5387 226 SUPERFAMILY SSF109755 29 220 5.75E-14 T 14-10-2018 CF65_02737 368b03e7047b2fd6ec743c267bed5387 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 3 226 1.6E-78 T 14-10-2018 IPR002727 Protein of unknown function DUF47 CF65_01357 1d32d8729a79979c6ab204ff472a7ab1 191 SUPERFAMILY SSF100950 10 189 9.35E-56 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_01357 1d32d8729a79979c6ab204ff472a7ab1 191 PIRSF PIRSF006806 7 191 3.1E-44 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CF65_01357 1d32d8729a79979c6ab204ff472a7ab1 191 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 189 9.9E-51 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CF65_01357 1d32d8729a79979c6ab204ff472a7ab1 191 Gene3D G3DSA:3.40.50.10420 2 191 3.6E-57 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CF65_01357 1d32d8729a79979c6ab204ff472a7ab1 191 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 189 6.7E-57 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CF65_01416 dbfb3646ad9628cf1a084f65ae15ed99 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.6E-71 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CF65_01416 dbfb3646ad9628cf1a084f65ae15ed99 159 SUPERFAMILY SSF69765 1 157 4.71E-68 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CF65_01416 dbfb3646ad9628cf1a084f65ae15ed99 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CF65_01416 dbfb3646ad9628cf1a084f65ae15ed99 159 Pfam PF02542 YgbB family 2 155 5.7E-68 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CF65_01416 dbfb3646ad9628cf1a084f65ae15ed99 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.928 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CF65_01416 dbfb3646ad9628cf1a084f65ae15ed99 159 Gene3D G3DSA:3.30.1330.50 1 159 3.8E-74 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CF65_01106 c1885190e992e81f0660ef70b6ed1840 203 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 201 33.471 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD CF65_01106 c1885190e992e81f0660ef70b6ed1840 203 SUPERFAMILY SSF101322 1 202 8.89E-74 T 14-10-2018 IPR035932 HflD-like superfamily CF65_01106 c1885190e992e81f0660ef70b6ed1840 203 Pfam PF04356 Protein of unknown function (DUF489) 6 193 3.8E-70 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD CF65_01106 c1885190e992e81f0660ef70b6ed1840 203 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 8 199 4.0E-58 T 14-10-2018 CF65_01106 c1885190e992e81f0660ef70b6ed1840 203 Gene3D G3DSA:1.10.3890.10 1 203 2.9E-70 T 14-10-2018 IPR035932 HflD-like superfamily CF65_00497 84581ede41372b7563ec295ee388ddc6 441 SUPERFAMILY SSF103473 16 435 2.22E-82 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_00497 84581ede41372b7563ec295ee388ddc6 441 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 412 4.9E-132 T 14-10-2018 CF65_00497 84581ede41372b7563ec295ee388ddc6 441 ProSitePatterns PS00942 glpT family of transporters signature. 150 166 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 CF65_00497 84581ede41372b7563ec295ee388ddc6 441 Gene3D G3DSA:1.20.1250.20 18 222 7.7E-53 T 14-10-2018 CF65_00497 84581ede41372b7563ec295ee388ddc6 441 Gene3D G3DSA:1.20.1250.20 239 440 1.0E-43 T 14-10-2018 CF65_00497 84581ede41372b7563ec295ee388ddc6 441 PIRSF PIRSF002808 6 441 9.8E-135 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CF65_00497 84581ede41372b7563ec295ee388ddc6 441 Pfam PF07690 Major Facilitator Superfamily 36 395 7.4E-54 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CF65_02674 66a86c329bcdc48b8f1613d00f28e6e6 231 Gene3D G3DSA:3.40.140.10 85 230 1.4E-43 T 14-10-2018 CF65_02674 66a86c329bcdc48b8f1613d00f28e6e6 231 Pfam PF02634 FdhD/NarQ family 1 227 1.9E-70 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CF65_02674 66a86c329bcdc48b8f1613d00f28e6e6 231 Gene3D G3DSA:3.10.20.10 1 84 7.8E-11 T 14-10-2018 CF65_02674 66a86c329bcdc48b8f1613d00f28e6e6 231 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 1 228 26.811 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CF65_02674 66a86c329bcdc48b8f1613d00f28e6e6 231 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 1 228 4.5E-80 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CF65_02674 66a86c329bcdc48b8f1613d00f28e6e6 231 SUPERFAMILY SSF53927 1 227 3.31E-70 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CF65_02674 66a86c329bcdc48b8f1613d00f28e6e6 231 PIRSF PIRSF015626 1 230 2.2E-72 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CF65_02829 525e719d31424ab647321cff3c1f4b19 155 ProSitePatterns PS01068 OmpA-like domain. 87 131 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CF65_02829 525e719d31424ab647321cff3c1f4b19 155 Gene3D G3DSA:3.30.1330.60 26 155 1.4E-39 T 14-10-2018 IPR036737 OmpA-like domain superfamily CF65_02829 525e719d31424ab647321cff3c1f4b19 155 SUPERFAMILY SSF103088 46 153 1.83E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily CF65_02829 525e719d31424ab647321cff3c1f4b19 155 PRINTS PR01021 OMPA domain signature 85 100 2.9E-18 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CF65_02829 525e719d31424ab647321cff3c1f4b19 155 PRINTS PR01021 OMPA domain signature 100 116 2.9E-18 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CF65_02829 525e719d31424ab647321cff3c1f4b19 155 PRINTS PR01021 OMPA domain signature 55 77 2.9E-18 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CF65_02829 525e719d31424ab647321cff3c1f4b19 155 Pfam PF00691 OmpA family 54 149 9.9E-21 T 14-10-2018 IPR006665 OmpA-like domain CF65_02829 525e719d31424ab647321cff3c1f4b19 155 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 52 155 3.0E-44 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 CF65_02829 525e719d31424ab647321cff3c1f4b19 155 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 3 155 30.181 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 CF65_00790 3fd4f19b53947cc74e8f2e16f2a04eae 200 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 8.0E-80 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CF65_00790 3fd4f19b53947cc74e8f2e16f2a04eae 200 SMART SM00493 81 166 1.7E-15 T 14-10-2018 IPR006171 TOPRIM domain CF65_00790 3fd4f19b53947cc74e8f2e16f2a04eae 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 103.849 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CF65_00790 3fd4f19b53947cc74e8f2e16f2a04eae 200 Gene3D G3DSA:3.40.1360.10 77 199 2.6E-40 T 14-10-2018 CF65_00790 3fd4f19b53947cc74e8f2e16f2a04eae 200 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CF65_00790 3fd4f19b53947cc74e8f2e16f2a04eae 200 Gene3D G3DSA:1.10.8.420 1 52 4.7E-19 T 14-10-2018 CF65_00790 3fd4f19b53947cc74e8f2e16f2a04eae 200 SUPERFAMILY SSF111304 2 199 1.83E-73 T 14-10-2018 IPR023627 Recombination protein RecR CF65_00790 3fd4f19b53947cc74e8f2e16f2a04eae 200 Pfam PF13662 Toprim domain 83 172 5.3E-24 T 14-10-2018 IPR006171 TOPRIM domain CF65_00790 3fd4f19b53947cc74e8f2e16f2a04eae 200 Pfam PF02132 RecR protein 41 77 6.1E-16 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger CF65_01383 58f20d5e94bb075d355f64b80ec2ac2c 372 SUPERFAMILY SSF102405 81 286 1.01E-40 T 14-10-2018 CF65_01383 58f20d5e94bb075d355f64b80ec2ac2c 372 Pfam PF02481 DNA recombination-mediator protein A 71 277 3.4E-79 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CF65_01383 58f20d5e94bb075d355f64b80ec2ac2c 372 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 69 286 6.9E-85 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CF65_01383 58f20d5e94bb075d355f64b80ec2ac2c 372 Gene3D G3DSA:3.40.50.450 1 289 5.1E-97 T 14-10-2018 CF65_00183 88bc598e16484c1bb147aa52acad6050 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 155 8.9E-64 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CF65_00183 88bc598e16484c1bb147aa52acad6050 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 97 6.2E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CF65_00183 88bc598e16484c1bb147aa52acad6050 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 116 129 6.2E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CF65_00183 88bc598e16484c1bb147aa52acad6050 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 115 6.2E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CF65_00183 88bc598e16484c1bb147aa52acad6050 155 Pfam PF00364 Biotin-requiring enzyme 81 154 4.1E-26 T 14-10-2018 IPR000089 Biotin/lipoyl attachment CF65_00183 88bc598e16484c1bb147aa52acad6050 155 SUPERFAMILY SSF51230 80 155 1.57E-25 T 14-10-2018 IPR011053 Single hybrid motif CF65_00183 88bc598e16484c1bb147aa52acad6050 155 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 111 128 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CF65_00183 88bc598e16484c1bb147aa52acad6050 155 Gene3D G3DSA:2.40.50.100 76 155 6.1E-31 T 14-10-2018 CF65_02922 47355878c2328c1191d0c782720d3547 379 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 3 368 2.0E-170 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CF65_02922 47355878c2328c1191d0c782720d3547 379 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 378 34.158 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CF65_02922 47355878c2328c1191d0c782720d3547 379 Pfam PF00171 Aldehyde dehydrogenase family 65 247 2.0E-14 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CF65_02922 47355878c2328c1191d0c782720d3547 379 Gene3D G3DSA:3.40.309.10 186 336 2.7E-144 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CF65_02922 47355878c2328c1191d0c782720d3547 379 PIRSF PIRSF000151 1 379 5.1E-151 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CF65_02922 47355878c2328c1191d0c782720d3547 379 Gene3D G3DSA:3.40.605.10 3 373 2.7E-144 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CF65_02922 47355878c2328c1191d0c782720d3547 379 SUPERFAMILY SSF53720 3 378 1.31E-99 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CF65_02103 d028bebd685dffe170867a85f5c83b94 200 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 1 128 2.1E-24 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CF65_02103 d028bebd685dffe170867a85f5c83b94 200 SUPERFAMILY SSF56601 1 167 6.05E-29 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CF65_02103 d028bebd685dffe170867a85f5c83b94 200 Gene3D G3DSA:3.40.710.10 1 192 2.1E-34 T 14-10-2018 CF65_02103 d028bebd685dffe170867a85f5c83b94 200 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 1 18 2.8E-8 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CF65_02103 d028bebd685dffe170867a85f5c83b94 200 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 28 41 2.8E-8 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CF65_02818 144ea03abc52a909e536647286b2968f 334 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 263 269 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CF65_02818 144ea03abc52a909e536647286b2968f 334 Gene3D G3DSA:3.40.50.150 1 154 3.0E-44 T 14-10-2018 CF65_02818 144ea03abc52a909e536647286b2968f 334 Pfam PF05175 Methyltransferase small domain 166 330 1.3E-58 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CF65_02818 144ea03abc52a909e536647286b2968f 334 SUPERFAMILY SSF53335 160 325 1.14E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02818 144ea03abc52a909e536647286b2968f 334 Gene3D G3DSA:3.40.50.150 159 333 6.7E-47 T 14-10-2018 CF65_02818 144ea03abc52a909e536647286b2968f 334 Pfam PF08468 Methyltransferase small domain N-terminal 6 158 7.6E-54 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 CF65_02818 144ea03abc52a909e536647286b2968f 334 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 2 334 43.107 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 CF65_02867 5595560c2e74ea9c53a41b3b74a550ff 217 SMART SM00479 21 206 5.4E-36 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_02867 5595560c2e74ea9c53a41b3b74a550ff 217 Gene3D G3DSA:3.30.420.10 12 216 1.9E-54 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CF65_02867 5595560c2e74ea9c53a41b3b74a550ff 217 Pfam PF00929 Exonuclease 23 197 1.8E-40 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_02867 5595560c2e74ea9c53a41b3b74a550ff 217 SUPERFAMILY SSF53098 11 209 5.32E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_02867 5595560c2e74ea9c53a41b3b74a550ff 217 Hamap MF_00157 Ribonuclease T [rnt]. 1 217 109.406 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CF65_02867 5595560c2e74ea9c53a41b3b74a550ff 217 TIGRFAM TIGR01298 RNaseT: ribonuclease T 13 211 6.5E-108 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CF65_01708 e19bb58142dac6dbfb5e8796e7651916 126 Gene3D G3DSA:3.40.30.10 40 123 1.2E-20 T 14-10-2018 CF65_01708 e19bb58142dac6dbfb5e8796e7651916 126 PRINTS PR00160 Glutaredoxin signature 42 60 3.2E-10 T 14-10-2018 IPR014025 Glutaredoxin subgroup CF65_01708 e19bb58142dac6dbfb5e8796e7651916 126 PRINTS PR00160 Glutaredoxin signature 91 104 3.2E-10 T 14-10-2018 IPR014025 Glutaredoxin subgroup CF65_01708 e19bb58142dac6dbfb5e8796e7651916 126 PRINTS PR00160 Glutaredoxin signature 105 118 3.2E-10 T 14-10-2018 IPR014025 Glutaredoxin subgroup CF65_01708 e19bb58142dac6dbfb5e8796e7651916 126 ProSitePatterns PS00195 Glutaredoxin active site. 44 59 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CF65_01708 e19bb58142dac6dbfb5e8796e7651916 126 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 41 122 3.2E-38 T 14-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 CF65_01708 e19bb58142dac6dbfb5e8796e7651916 126 SUPERFAMILY SSF52833 42 119 7.97E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_01708 e19bb58142dac6dbfb5e8796e7651916 126 Pfam PF00462 Glutaredoxin 42 107 3.1E-11 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CF65_01984 d716a1a2338912960075a2675e5e074e 286 Gene3D G3DSA:3.40.50.150 108 286 1.7E-45 T 14-10-2018 CF65_01984 d716a1a2338912960075a2675e5e074e 286 SUPERFAMILY SSF51197 2 102 1.37E-39 T 14-10-2018 CF65_01984 d716a1a2338912960075a2675e5e074e 286 PIRSF PIRSF005215 1 286 4.1E-152 T 14-10-2018 IPR014431 Tellurite resistance methyltransferase, TehB type-2 CF65_01984 d716a1a2338912960075a2675e5e074e 286 Gene3D G3DSA:2.60.120.10 1 107 4.8E-45 T 14-10-2018 IPR014710 RmlC-like jelly roll fold CF65_01984 d716a1a2338912960075a2675e5e074e 286 Pfam PF09313 Domain of unknown function (DUF1971) 9 89 2.4E-33 T 14-10-2018 IPR015392 Domain of unknown function DUF1971 CF65_01984 d716a1a2338912960075a2675e5e074e 286 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 49 285 4.4E-130 T 14-10-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 CF65_01984 d716a1a2338912960075a2675e5e074e 286 Pfam PF03848 Tellurite resistance protein TehB 91 282 5.4E-108 T 14-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain CF65_01984 d716a1a2338912960075a2675e5e074e 286 SUPERFAMILY SSF53335 65 275 5.78E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01514 9fc19780e63689ae932e79331689f9d9 242 Pfam PF08534 Redoxin 5 159 3.1E-33 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CF65_01514 9fc19780e63689ae932e79331689f9d9 242 Gene3D G3DSA:3.40.30.10 6 164 8.6E-62 T 14-10-2018 CF65_01514 9fc19780e63689ae932e79331689f9d9 242 Gene3D G3DSA:3.40.30.10 170 241 3.0E-25 T 14-10-2018 CF65_01514 9fc19780e63689ae932e79331689f9d9 242 Pfam PF00462 Glutaredoxin 172 230 1.4E-18 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CF65_01514 9fc19780e63689ae932e79331689f9d9 242 ProSitePatterns PS00195 Glutaredoxin active site. 174 190 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CF65_01514 9fc19780e63689ae932e79331689f9d9 242 SUPERFAMILY SSF52833 3 239 4.91E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_01514 9fc19780e63689ae932e79331689f9d9 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 163 241 4.7E-39 T 14-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 CF65_01514 9fc19780e63689ae932e79331689f9d9 242 PRINTS PR00160 Glutaredoxin signature 172 190 6.0E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup CF65_01514 9fc19780e63689ae932e79331689f9d9 242 PRINTS PR00160 Glutaredoxin signature 213 226 6.0E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup CF65_01514 9fc19780e63689ae932e79331689f9d9 242 PRINTS PR00160 Glutaredoxin signature 227 240 6.0E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 SUPERFAMILY SSF47323 625 904 5.98E-80 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 Gene3D G3DSA:3.40.50.620 1 602 1.8E-237 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 SUPERFAMILY SSF50677 177 376 6.59E-56 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 Gene3D G3DSA:3.90.740.10 168 381 1.8E-237 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 SUPERFAMILY SSF52374 2 621 3.52E-131 T 14-10-2018 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 Pfam PF08264 Anticodon-binding domain of tRNA 658 817 1.0E-27 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 499 512 3.2E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 374 389 3.2E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 24 35 3.2E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 212 235 3.2E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 534 543 3.2E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 Gene3D G3DSA:1.10.730.20 613 905 5.2E-94 T 14-10-2018 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 1 613 6.8E-220 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 31 42 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 904 20.58 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 1 819 9.6E-292 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CF65_02950 6a0ba260124d6aa8a5fd35f35edf7a86 913 Pfam PF06827 Zinc finger found in FPG and IleRS 874 901 1.3E-9 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 Gene3D G3DSA:3.40.50.300 21 226 1.4E-82 T 14-10-2018 CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 SMART SM00490 268 349 1.9E-26 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 34 481 1.6E-200 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 SMART SM00341 549 629 4.1E-25 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 SUPERFAMILY SSF52540 226 473 1.51E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 SUPERFAMILY SSF52540 22 218 6.58E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 SMART SM00487 40 236 8.1E-35 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 Pfam PF00270 DEAD/DEAH box helicase 47 206 4.2E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 SMART SM00956 429 533 1.6E-47 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 Gene3D G3DSA:1.10.10.10 359 539 1.1E-46 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 Pfam PF09382 RQC domain 424 534 4.6E-34 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 SUPERFAMILY SSF47819 550 623 5.45E-25 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 Gene3D G3DSA:3.40.50.300 227 358 1.1E-42 T 14-10-2018 CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 Pfam PF16124 RecQ zinc-binding 361 422 5.9E-15 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 Pfam PF00570 HRDC domain 553 619 2.5E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 Pfam PF00271 Helicase conserved C-terminal domain 243 347 2.4E-19 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 33 622 6.8E-243 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CF65_00927 65b92042bc0886f9fcd6a62a63c8ad66 629 Gene3D G3DSA:1.10.150.80 543 625 3.7E-26 T 14-10-2018 CF65_01329 f76fa732177ec81ac3cc70a643ccc281 340 Gene3D G3DSA:3.40.50.2000 180 339 7.6E-12 T 14-10-2018 CF65_01329 f76fa732177ec81ac3cc70a643ccc281 340 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 266 314 1.9E-6 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 CF65_01329 f76fa732177ec81ac3cc70a643ccc281 340 SUPERFAMILY SSF53756 31 339 2.61E-48 T 14-10-2018 CF65_01329 f76fa732177ec81ac3cc70a643ccc281 340 Gene3D G3DSA:3.40.50.2000 26 175 8.4E-23 T 14-10-2018 CF65_02026 b96fe5e416c0d7fa10fdb4f4897f27d7 352 Gene3D G3DSA:3.90.226.10 108 304 5.9E-45 T 14-10-2018 CF65_02026 b96fe5e416c0d7fa10fdb4f4897f27d7 352 Pfam PF01343 Peptidase family S49 164 313 4.6E-52 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CF65_02026 b96fe5e416c0d7fa10fdb4f4897f27d7 352 Gene3D G3DSA:3.40.1750.20 205 269 5.9E-45 T 14-10-2018 CF65_02026 b96fe5e416c0d7fa10fdb4f4897f27d7 352 SUPERFAMILY SSF52096 99 302 2.93E-32 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CF65_02026 b96fe5e416c0d7fa10fdb4f4897f27d7 352 Pfam PF08496 Peptidase family S49 N-terminal 4 161 1.6E-55 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 CF65_01923 b4f735ff3543bc30b411eb6b2ca818a4 790 SUPERFAMILY SSF53335 224 587 8.45E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01923 b4f735ff3543bc30b411eb6b2ca818a4 790 Pfam PF01555 DNA methylase 252 567 4.3E-29 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CF65_01923 b4f735ff3543bc30b411eb6b2ca818a4 790 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 557 577 8.3E-7 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CF65_01923 b4f735ff3543bc30b411eb6b2ca818a4 790 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 528 546 8.3E-7 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CF65_01923 b4f735ff3543bc30b411eb6b2ca818a4 790 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 251 265 8.3E-7 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CF65_01923 b4f735ff3543bc30b411eb6b2ca818a4 790 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 255 261 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CF65_00378 1eedc4d0979d4f9877d54be6c18b709d 155 SUPERFAMILY SSF54909 80 155 4.16E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel CF65_00378 1eedc4d0979d4f9877d54be6c18b709d 155 SMART SM00344 6 115 1.2E-33 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CF65_00378 1eedc4d0979d4f9877d54be6c18b709d 155 Gene3D G3DSA:3.30.70.920 59 142 1.4E-15 T 14-10-2018 CF65_00378 1eedc4d0979d4f9877d54be6c18b709d 155 Gene3D G3DSA:1.10.10.10 7 58 2.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00378 1eedc4d0979d4f9877d54be6c18b709d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.5E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CF65_00378 1eedc4d0979d4f9877d54be6c18b709d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.5E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CF65_00378 1eedc4d0979d4f9877d54be6c18b709d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.5E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CF65_00378 1eedc4d0979d4f9877d54be6c18b709d 155 SUPERFAMILY SSF46785 6 64 1.86E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00378 1eedc4d0979d4f9877d54be6c18b709d 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CF65_00378 1eedc4d0979d4f9877d54be6c18b709d 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 52 9.1E-19 T 14-10-2018 CF65_00378 1eedc4d0979d4f9877d54be6c18b709d 155 Pfam PF01037 Lrp/AsnC ligand binding domain 81 146 3.5E-14 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CF65_02913 90623cb567394b3d9122bc33b8894405 319 Gene3D G3DSA:3.10.290.10 10 74 1.9E-15 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CF65_02913 90623cb567394b3d9122bc33b8894405 319 Pfam PF01479 S4 domain 22 68 3.5E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_02913 90623cb567394b3d9122bc33b8894405 319 SMART SM00363 22 81 2.0E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_02913 90623cb567394b3d9122bc33b8894405 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 316 3.2E-96 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02913 90623cb567394b3d9122bc33b8894405 319 SUPERFAMILY SSF55120 92 316 2.56E-65 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02913 90623cb567394b3d9122bc33b8894405 319 Gene3D G3DSA:3.30.2350.10 94 319 3.7E-84 T 14-10-2018 CF65_02913 90623cb567394b3d9122bc33b8894405 319 SUPERFAMILY SSF55174 21 72 2.65E-8 T 14-10-2018 CF65_02913 90623cb567394b3d9122bc33b8894405 319 Pfam PF00849 RNA pseudouridylate synthase 104 251 1.1E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02913 90623cb567394b3d9122bc33b8894405 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02704 8d376ba574782b97aaded7e55d7f3d7c 407 Gene3D G3DSA:2.40.50.100 1 79 2.0E-23 T 14-10-2018 CF65_02704 8d376ba574782b97aaded7e55d7f3d7c 407 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CF65_02704 8d376ba574782b97aaded7e55d7f3d7c 407 Gene3D G3DSA:4.10.320.10 105 153 8.4E-16 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CF65_02704 8d376ba574782b97aaded7e55d7f3d7c 407 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 177 405 7.5E-86 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 CF65_02704 8d376ba574782b97aaded7e55d7f3d7c 407 Gene3D G3DSA:3.30.559.10 175 407 4.8E-101 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CF65_02704 8d376ba574782b97aaded7e55d7f3d7c 407 SUPERFAMILY SSF47005 112 152 9.81E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CF65_02704 8d376ba574782b97aaded7e55d7f3d7c 407 Pfam PF00364 Biotin-requiring enzyme 4 75 1.5E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment CF65_02704 8d376ba574782b97aaded7e55d7f3d7c 407 Pfam PF02817 e3 binding domain 114 148 1.1E-11 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 CF65_02704 8d376ba574782b97aaded7e55d7f3d7c 407 SUPERFAMILY SSF51230 1 92 3.4E-25 T 14-10-2018 IPR011053 Single hybrid motif CF65_02704 8d376ba574782b97aaded7e55d7f3d7c 407 SUPERFAMILY SSF52777 177 406 3.83E-93 T 14-10-2018 CF65_02704 8d376ba574782b97aaded7e55d7f3d7c 407 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 406 4.5E-188 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CF65_01473 97497a216ce8a9adc8477802a9155f48 376 Pfam PF01420 Type I restriction modification DNA specificity domain 8 157 5.0E-17 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CF65_01473 97497a216ce8a9adc8477802a9155f48 376 Pfam PF01420 Type I restriction modification DNA specificity domain 198 328 5.0E-14 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CF65_01473 97497a216ce8a9adc8477802a9155f48 376 Gene3D G3DSA:1.10.287.1120 327 365 4.3E-32 T 14-10-2018 CF65_01473 97497a216ce8a9adc8477802a9155f48 376 SUPERFAMILY SSF116734 7 170 2.62E-37 T 14-10-2018 CF65_01473 97497a216ce8a9adc8477802a9155f48 376 Gene3D G3DSA:3.90.220.20 2 123 6.0E-25 T 14-10-2018 CF65_01473 97497a216ce8a9adc8477802a9155f48 376 Gene3D G3DSA:3.90.220.20 188 326 4.3E-32 T 14-10-2018 CF65_01473 97497a216ce8a9adc8477802a9155f48 376 SUPERFAMILY SSF116734 190 373 2.78E-34 T 14-10-2018 CF65_02987 a6d74582c421dafd6d598ae3697256e0 116 SUPERFAMILY SSF54197 3 111 4.18E-34 T 14-10-2018 IPR036265 HIT-like superfamily CF65_02987 a6d74582c421dafd6d598ae3697256e0 116 Gene3D G3DSA:3.30.428.10 1 116 7.5E-35 T 14-10-2018 IPR036265 HIT-like superfamily CF65_02987 a6d74582c421dafd6d598ae3697256e0 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 14-10-2018 IPR019808 Histidine triad, conserved site CF65_02987 a6d74582c421dafd6d598ae3697256e0 116 Pfam PF01230 HIT domain 12 108 1.0E-29 T 14-10-2018 IPR001310 Histidine triad (HIT) protein CF65_02987 a6d74582c421dafd6d598ae3697256e0 116 PRINTS PR00332 Histidine triad family signature 27 45 3.1E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein CF65_02987 a6d74582c421dafd6d598ae3697256e0 116 PRINTS PR00332 Histidine triad family signature 95 105 3.1E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein CF65_02987 a6d74582c421dafd6d598ae3697256e0 116 PRINTS PR00332 Histidine triad family signature 6 22 3.1E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein CF65_00506 cfc5111d83cc8197ad3d6f813660f963 443 SUPERFAMILY SSF52540 78 363 1.37E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00506 cfc5111d83cc8197ad3d6f813660f963 443 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 5 429 48.204 T 14-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 CF65_00506 cfc5111d83cc8197ad3d6f813660f963 443 Gene3D G3DSA:3.40.50.300 1 213 1.2E-71 T 14-10-2018 CF65_00506 cfc5111d83cc8197ad3d6f813660f963 443 Pfam PF00271 Helicase conserved C-terminal domain 236 344 1.6E-27 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_00506 cfc5111d83cc8197ad3d6f813660f963 443 Pfam PF00270 DEAD/DEAH box helicase 29 195 3.9E-47 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CF65_00506 cfc5111d83cc8197ad3d6f813660f963 443 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CF65_00506 cfc5111d83cc8197ad3d6f813660f963 443 SMART SM00490 263 344 4.5E-30 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_00506 cfc5111d83cc8197ad3d6f813660f963 443 SMART SM00487 24 226 7.0E-58 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_00506 cfc5111d83cc8197ad3d6f813660f963 443 Gene3D G3DSA:3.40.50.300 218 440 3.4E-50 T 14-10-2018 CF65_01151 a2e14696ded8cd7df0c935ec8242aadb 340 PIRSF PIRSF001415 2 336 1.1E-148 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CF65_01151 a2e14696ded8cd7df0c935ec8242aadb 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 9.6E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CF65_01151 a2e14696ded8cd7df0c935ec8242aadb 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 9.6E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CF65_01151 a2e14696ded8cd7df0c935ec8242aadb 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 9.6E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CF65_01151 a2e14696ded8cd7df0c935ec8242aadb 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 9.6E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CF65_01151 a2e14696ded8cd7df0c935ec8242aadb 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 9.6E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CF65_01151 a2e14696ded8cd7df0c935ec8242aadb 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 9.6E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CF65_01151 a2e14696ded8cd7df0c935ec8242aadb 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 2.4E-138 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CF65_01151 a2e14696ded8cd7df0c935ec8242aadb 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CF65_01151 a2e14696ded8cd7df0c935ec8242aadb 340 Gene3D G3DSA:3.20.20.70 2 336 8.6E-146 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_01151 a2e14696ded8cd7df0c935ec8242aadb 340 SUPERFAMILY SSF51569 5 333 9.38E-143 T 14-10-2018 CF65_01151 a2e14696ded8cd7df0c935ec8242aadb 340 SMART SM01004 9 333 6.9E-240 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CF65_00409 808ef6f0b135af0ef1492dd47f825fbd 318 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CF65_00409 808ef6f0b135af0ef1492dd47f825fbd 318 Pfam PF00551 Formyl transferase 6 183 1.9E-51 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CF65_00409 808ef6f0b135af0ef1492dd47f825fbd 318 SUPERFAMILY SSF53328 1 206 7.85E-68 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CF65_00409 808ef6f0b135af0ef1492dd47f825fbd 318 Gene3D G3DSA:3.10.25.10 209 317 2.1E-33 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CF65_00409 808ef6f0b135af0ef1492dd47f825fbd 318 Gene3D G3DSA:3.40.50.170 1 208 2.3E-83 T 14-10-2018 CF65_00409 808ef6f0b135af0ef1492dd47f825fbd 318 Pfam PF02911 Formyl transferase, C-terminal domain 206 307 7.6E-28 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CF65_00409 808ef6f0b135af0ef1492dd47f825fbd 318 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 313 3.1E-102 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CF65_00409 808ef6f0b135af0ef1492dd47f825fbd 318 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 310 36.461 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CF65_00409 808ef6f0b135af0ef1492dd47f825fbd 318 SUPERFAMILY SSF50486 207 313 2.2E-31 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 CF65_02745 191dd9a77fc29f9612e2331823cd32e4 303 SUPERFAMILY SSF55060 178 295 1.53E-38 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CF65_02745 191dd9a77fc29f9612e2331823cd32e4 303 Pfam PF08544 GHMP kinases C terminal 218 273 8.3E-7 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain CF65_02745 191dd9a77fc29f9612e2331823cd32e4 303 SUPERFAMILY SSF54211 22 174 1.52E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02745 191dd9a77fc29f9612e2331823cd32e4 303 Gene3D G3DSA:3.30.70.890 178 296 8.5E-30 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CF65_02745 191dd9a77fc29f9612e2331823cd32e4 303 Pfam PF00288 GHMP kinases N terminal domain 105 161 3.4E-8 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CF65_02745 191dd9a77fc29f9612e2331823cd32e4 303 Gene3D G3DSA:3.30.230.10 8 175 4.5E-54 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02745 191dd9a77fc29f9612e2331823cd32e4 303 PIRSF PIRSF010376 20 296 4.6E-86 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CF65_02745 191dd9a77fc29f9612e2331823cd32e4 303 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 22 296 5.2E-107 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CF65_02745 191dd9a77fc29f9612e2331823cd32e4 303 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 22 288 32.176 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CF65_01044 0acf7bb922630dd8ce4dde87bb127a88 396 Pfam PF14815 NUDIX domain 256 383 2.5E-19 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CF65_01044 0acf7bb922630dd8ce4dde87bb127a88 396 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 214 230 4.5E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CF65_01044 0acf7bb922630dd8ce4dde87bb127a88 396 SMART SM00525 213 233 3.2E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CF65_01044 0acf7bb922630dd8ce4dde87bb127a88 396 Gene3D G3DSA:3.90.79.10 247 389 1.7E-11 T 14-10-2018 CF65_01044 0acf7bb922630dd8ce4dde87bb127a88 396 SUPERFAMILY SSF55811 242 385 2.16E-19 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CF65_01044 0acf7bb922630dd8ce4dde87bb127a88 396 Gene3D G3DSA:1.10.340.30 43 154 2.1E-86 T 14-10-2018 CF65_01044 0acf7bb922630dd8ce4dde87bb127a88 396 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 28 297 7.1E-125 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CF65_01044 0acf7bb922630dd8ce4dde87bb127a88 396 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 214 230 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CF65_01044 0acf7bb922630dd8ce4dde87bb127a88 396 SMART SM00478 61 212 1.5E-52 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CF65_01044 0acf7bb922630dd8ce4dde87bb127a88 396 SUPERFAMILY SSF48150 27 247 7.69E-77 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CF65_01044 0acf7bb922630dd8ce4dde87bb127a88 396 Gene3D G3DSA:1.10.1670.10 31 233 2.1E-86 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CF65_01044 0acf7bb922630dd8ce4dde87bb127a88 396 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 58 190 3.0E-20 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CF65_00200 819c29dee5a44aac8569baa334de7715 266 PRINTS PR00108 Thymidylate synthase family signature 112 131 3.3E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CF65_00200 819c29dee5a44aac8569baa334de7715 266 PRINTS PR00108 Thymidylate synthase family signature 27 48 3.3E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CF65_00200 819c29dee5a44aac8569baa334de7715 266 PRINTS PR00108 Thymidylate synthase family signature 194 211 3.3E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CF65_00200 819c29dee5a44aac8569baa334de7715 266 PRINTS PR00108 Thymidylate synthase family signature 156 182 3.3E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CF65_00200 819c29dee5a44aac8569baa334de7715 266 Pfam PF00303 Thymidylate synthase 3 266 3.5E-68 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CF65_00200 819c29dee5a44aac8569baa334de7715 266 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 266 6.4E-43 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CF65_00200 819c29dee5a44aac8569baa334de7715 266 Gene3D G3DSA:3.30.572.10 1 266 7.6E-75 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CF65_00200 819c29dee5a44aac8569baa334de7715 266 ProSitePatterns PS00091 Thymidylate synthase active site. 123 151 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CF65_00200 819c29dee5a44aac8569baa334de7715 266 SUPERFAMILY SSF55831 3 266 5.63E-87 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CF65_01996 e8eb3301241bb76be3a17e2270a55000 258 SUPERFAMILY SSF51735 1 123 3.65E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01996 e8eb3301241bb76be3a17e2270a55000 258 Gene3D G3DSA:3.40.50.720 1 131 1.2E-38 T 14-10-2018 CF65_01996 e8eb3301241bb76be3a17e2270a55000 258 Pfam PF02153 Prephenate dehydrogenase 21 228 4.6E-30 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CF65_01996 e8eb3301241bb76be3a17e2270a55000 258 SUPERFAMILY SSF48179 125 251 7.65E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CF65_01996 e8eb3301241bb76be3a17e2270a55000 258 Gene3D G3DSA:1.10.3660.10 132 258 1.9E-50 T 14-10-2018 CF65_00846 775facd27724d12d521d6fadabd164d9 105 Pfam PF04999 Cell division protein FtsL 10 104 1.3E-30 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CF65_00846 775facd27724d12d521d6fadabd164d9 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 21 103 15.626 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CF65_00846 775facd27724d12d521d6fadabd164d9 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 103 1.1E-21 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CF65_00039 b49a667777b86c02355c6a79fb8dfe21 349 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 3 126 1.6E-62 T 14-10-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF CF65_00039 b49a667777b86c02355c6a79fb8dfe21 349 SUPERFAMILY SSF48452 219 324 5.96E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00039 b49a667777b86c02355c6a79fb8dfe21 349 Gene3D G3DSA:1.10.8.640 19 103 2.5E-31 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CF65_00039 b49a667777b86c02355c6a79fb8dfe21 349 SMART SM00028 223 256 1.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CF65_00039 b49a667777b86c02355c6a79fb8dfe21 349 SMART SM00028 294 327 65.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CF65_00039 b49a667777b86c02355c6a79fb8dfe21 349 Pfam PF03918 Cytochrome C biogenesis protein 7 135 4.3E-44 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CF65_00039 b49a667777b86c02355c6a79fb8dfe21 349 Gene3D G3DSA:1.25.40.10 187 255 3.7E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00039 b49a667777b86c02355c6a79fb8dfe21 349 Gene3D G3DSA:1.25.40.10 256 343 1.2E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00935 3f47fbb86e3593072ca9f524a153de4c 156 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 150 7.3E-15 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CF65_00581 1537a064d63e7a00922b30f5c654a559 94 Gene3D G3DSA:3.40.250.10 1 92 1.1E-21 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily CF65_00581 1537a064d63e7a00922b30f5c654a559 94 SUPERFAMILY SSF52821 2 92 5.63E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily CF65_00581 1537a064d63e7a00922b30f5c654a559 94 Pfam PF00581 Rhodanese-like domain 4 85 2.0E-14 T 14-10-2018 IPR001763 Rhodanese-like domain CF65_00581 1537a064d63e7a00922b30f5c654a559 94 SMART SM00450 1 89 3.4E-12 T 14-10-2018 IPR001763 Rhodanese-like domain CF65_02307 0b3804734bdf5b1b85975add5d73d675 236 Pfam PF00625 Guanylate kinase 28 210 4.1E-63 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CF65_02307 0b3804734bdf5b1b85975add5d73d675 236 ProSitePatterns PS00856 Guanylate kinase-like signature. 64 81 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CF65_02307 0b3804734bdf5b1b85975add5d73d675 236 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 28 209 1.3E-73 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CF65_02307 0b3804734bdf5b1b85975add5d73d675 236 SUPERFAMILY SSF52540 27 214 2.34E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02307 0b3804734bdf5b1b85975add5d73d675 236 Gene3D G3DSA:3.30.63.10 61 121 8.4E-70 T 14-10-2018 CF65_02307 0b3804734bdf5b1b85975add5d73d675 236 Gene3D G3DSA:3.40.50.300 32 208 8.4E-70 T 14-10-2018 CF65_02307 0b3804734bdf5b1b85975add5d73d675 236 Hamap MF_00328 Guanylate kinase [gmk]. 26 212 37.189 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CF65_02307 0b3804734bdf5b1b85975add5d73d675 236 SMART SM00072 27 212 5.1E-69 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CF65_02177 d6375d1ccf39f5fed3fdf605f949335e 130 Gene3D G3DSA:3.30.429.10 1 130 7.7E-36 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily CF65_02177 d6375d1ccf39f5fed3fdf605f949335e 130 SUPERFAMILY SSF55331 1 120 2.41E-25 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily CF65_02177 d6375d1ccf39f5fed3fdf605f949335e 130 Pfam PF14552 Tautomerase enzyme 38 114 2.6E-23 T 14-10-2018 IPR037479 Tautomerase, MSAD family CF65_01807 5e04995cf2a9703912570a1fb90614f5 196 Pfam PF04060 Putative Fe-S cluster 44 75 7.2E-13 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 CF65_01807 5e04995cf2a9703912570a1fb90614f5 196 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 5 175 9.6E-78 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 CF65_01807 5e04995cf2a9703912570a1fb90614f5 196 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_01807 5e04995cf2a9703912570a1fb90614f5 196 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 165 24.396 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 CF65_01807 5e04995cf2a9703912570a1fb90614f5 196 SUPERFAMILY SSF54862 38 169 3.63E-30 T 14-10-2018 CF65_01807 5e04995cf2a9703912570a1fb90614f5 196 Pfam PF14697 4Fe-4S dicluster domain 106 160 3.1E-16 T 14-10-2018 CF65_01807 5e04995cf2a9703912570a1fb90614f5 196 Gene3D G3DSA:1.10.15.40 39 78 1.7E-5 T 14-10-2018 CF65_01807 5e04995cf2a9703912570a1fb90614f5 196 PIRSF PIRSF005784 3 187 9.7E-81 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CF65_01807 5e04995cf2a9703912570a1fb90614f5 196 Gene3D G3DSA:3.30.70.20 83 173 3.7E-20 T 14-10-2018 CF65_01815 6a90d75069a0ccb68c9c679df1e19cc9 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 263 283 3.2E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_01815 6a90d75069a0ccb68c9c679df1e19cc9 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 435 455 3.2E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_01815 6a90d75069a0ccb68c9c679df1e19cc9 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 16 37 3.2E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_01815 6a90d75069a0ccb68c9c679df1e19cc9 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 45 64 3.2E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_01815 6a90d75069a0ccb68c9c679df1e19cc9 455 SUPERFAMILY SSF161070 8 455 8.63E-125 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 CF65_01815 6a90d75069a0ccb68c9c679df1e19cc9 455 Pfam PF00209 Sodium:neurotransmitter symporter family 8 134 1.5E-23 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_01815 6a90d75069a0ccb68c9c679df1e19cc9 455 Pfam PF00209 Sodium:neurotransmitter symporter family 162 455 1.4E-33 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_01815 6a90d75069a0ccb68c9c679df1e19cc9 455 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 32 46 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_01852 a58135e90b032d397788e58e50b41641 527 SUPERFAMILY SSF54980 391 466 1.8E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like CF65_01852 a58135e90b032d397788e58e50b41641 527 SUPERFAMILY SSF50447 260 391 1.67E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CF65_01852 a58135e90b032d397788e58e50b41641 527 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 52.144 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CF65_01852 a58135e90b032d397788e58e50b41641 527 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 151 5.5E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CF65_01852 a58135e90b032d397788e58e50b41641 527 Pfam PF00009 Elongation factor Tu GTP binding domain 11 275 1.1E-46 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_01852 a58135e90b032d397788e58e50b41641 527 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 8.8E-47 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal CF65_01852 a58135e90b032d397788e58e50b41641 527 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site CF65_01852 a58135e90b032d397788e58e50b41641 527 Pfam PF03144 Elongation factor Tu domain 2 312 378 1.1E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CF65_01852 a58135e90b032d397788e58e50b41641 527 PRINTS PR00315 GTP-binding elongation factor signature 135 144 3.7E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_01852 a58135e90b032d397788e58e50b41641 527 PRINTS PR00315 GTP-binding elongation factor signature 13 26 3.7E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_01852 a58135e90b032d397788e58e50b41641 527 PRINTS PR00315 GTP-binding elongation factor signature 83 93 3.7E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_01852 a58135e90b032d397788e58e50b41641 527 PRINTS PR00315 GTP-binding elongation factor signature 63 71 3.7E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_01852 a58135e90b032d397788e58e50b41641 527 Gene3D G3DSA:3.40.50.300 70 377 7.9E-115 T 14-10-2018 CF65_01852 a58135e90b032d397788e58e50b41641 527 SUPERFAMILY SSF52540 8 275 8.07E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01852 a58135e90b032d397788e58e50b41641 527 Gene3D G3DSA:3.40.50.300 108 273 7.9E-115 T 14-10-2018 CF65_01852 a58135e90b032d397788e58e50b41641 527 Gene3D G3DSA:3.30.70.3280 388 527 1.5E-52 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CF65_01852 a58135e90b032d397788e58e50b41641 527 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 527 0.0 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CF65_02132 40d784e07923372d81162432b553f592 339 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 82 101 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CF65_02132 40d784e07923372d81162432b553f592 339 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 338 49.052 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CF65_02132 40d784e07923372d81162432b553f592 339 SUPERFAMILY SSF51395 1 337 1.76E-97 T 14-10-2018 CF65_02132 40d784e07923372d81162432b553f592 339 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 338 3.8E-157 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CF65_02132 40d784e07923372d81162432b553f592 339 Gene3D G3DSA:3.20.20.70 1 338 3.4E-128 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02132 40d784e07923372d81162432b553f592 339 PIRSF PIRSF000164 20 339 1.7E-90 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CF65_02132 40d784e07923372d81162432b553f592 339 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 294 314 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CF65_02132 40d784e07923372d81162432b553f592 339 Pfam PF01180 Dihydroorotate dehydrogenase 50 338 5.4E-85 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 Gene3D G3DSA:3.30.230.10 217 329 1.5E-40 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 SUPERFAMILY SSF55874 1 200 4.19E-56 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 SUPERFAMILY SSF118116 443 613 3.4E-22 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.2E-106 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 123 6.1E-13 T 14-10-2018 CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 SMART SM01340 212 330 5.9E-60 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 5.6E-42 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 Gene3D G3DSA:3.30.1370.100 485 570 1.4E-24 T 14-10-2018 CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 Pfam PF08676 MutL C terminal dimerisation domain 444 567 1.1E-18 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 615 25.583 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 Gene3D G3DSA:2.30.42.20 446 612 1.4E-24 T 14-10-2018 CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 SMART SM00853 447 581 1.4E-8 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 Gene3D G3DSA:3.30.565.10 1 216 7.1E-73 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_01586 ea21ce14f059d97fb1ff5f145fce0de3 616 SUPERFAMILY SSF54211 191 330 1.56E-39 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00370 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00370 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00370 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily CF65_00370 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00370 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00370 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00370 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 1 103 3.9E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily CF65_00370 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 14-10-2018 IPR027486 Ribosomal protein S10 domain CF65_00370 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 14-10-2018 IPR027486 Ribosomal protein S10 domain CF65_00370 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_02381 5b6612095a95b15748d18bc64e1ab88a 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 209 1.3E-82 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CF65_02381 5b6612095a95b15748d18bc64e1ab88a 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CF65_02381 5b6612095a95b15748d18bc64e1ab88a 213 Pfam PF01081 KDPG and KHG aldolase 10 203 3.0E-83 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CF65_02381 5b6612095a95b15748d18bc64e1ab88a 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CF65_02381 5b6612095a95b15748d18bc64e1ab88a 213 Gene3D G3DSA:3.20.20.70 1 213 8.9E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02381 5b6612095a95b15748d18bc64e1ab88a 213 SUPERFAMILY SSF51569 3 211 2.2E-65 T 14-10-2018 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 2.3E-68 T 14-10-2018 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 2.3E-68 T 14-10-2018 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 2.3E-68 T 14-10-2018 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 2.3E-68 T 14-10-2018 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 2.3E-68 T 14-10-2018 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 2.3E-68 T 14-10-2018 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 6.9E-29 T 14-10-2018 IPR000362 Fumarate lyase family CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 6.9E-29 T 14-10-2018 IPR000362 Fumarate lyase family CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 6.9E-29 T 14-10-2018 IPR000362 Fumarate lyase family CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 6.9E-29 T 14-10-2018 IPR000362 Fumarate lyase family CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 9.0E-23 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 2.2E-209 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 Gene3D G3DSA:1.20.200.10 108 445 6.0E-147 T 14-10-2018 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 Gene3D G3DSA:1.10.275.10 1 107 8.4E-36 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 Gene3D G3DSA:1.10.40.30 363 433 6.0E-147 T 14-10-2018 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 SUPERFAMILY SSF48557 3 454 2.98E-138 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.713 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CF65_00218 dbfe78b0ae947e89f7080562f3ef4bf4 458 Pfam PF00206 Lyase 6 301 1.5E-92 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal CF65_02474 509481ec973a7c8633c4091e867b81f5 616 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 207 611 4.9E-153 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 CF65_02474 509481ec973a7c8633c4091e867b81f5 616 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 198 606 2.5E-109 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CF65_02474 509481ec973a7c8633c4091e867b81f5 616 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 19 146 2.6E-28 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 SUPERFAMILY SSF56059 115 328 5.66E-66 T 14-10-2018 CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 Gene3D G3DSA:3.40.50.20 1 85 7.8E-36 T 14-10-2018 CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 SUPERFAMILY SSF51246 331 444 3.77E-43 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 SUPERFAMILY SSF52440 1 113 4.32E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 2.5E-250 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 Gene3D G3DSA:3.30.470.20 86 433 1.6E-155 T 14-10-2018 CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.4E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 4.1E-83 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 SMART SM00878 336 441 9.2E-64 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.9E-45 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CF65_00182 fb99f1bd1b2ab546eb54eb4bdbac0653 448 Gene3D G3DSA:3.30.1490.20 131 203 1.6E-155 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CF65_00247 ea2984f27e6fc38ccf329bf5e120a24a 170 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 168 6.6E-50 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CF65_00247 ea2984f27e6fc38ccf329bf5e120a24a 170 SUPERFAMILY SSF50891 1 168 2.63E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily CF65_00247 ea2984f27e6fc38ccf329bf5e120a24a 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 139 1.1E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CF65_00247 ea2984f27e6fc38ccf329bf5e120a24a 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.1E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CF65_00247 ea2984f27e6fc38ccf329bf5e120a24a 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.1E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CF65_00247 ea2984f27e6fc38ccf329bf5e120a24a 170 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CF65_00247 ea2984f27e6fc38ccf329bf5e120a24a 170 PIRSF PIRSF001467 1 170 1.3E-26 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CF65_00247 ea2984f27e6fc38ccf329bf5e120a24a 170 Gene3D G3DSA:2.40.100.10 1 170 6.9E-68 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily CF65_01992 f2b480f82afac149fd9d19c758b5d42b 632 Pfam PF01343 Peptidase family S49 398 547 7.0E-48 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CF65_01992 f2b480f82afac149fd9d19c758b5d42b 632 Pfam PF01343 Peptidase family S49 144 298 1.3E-34 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CF65_01992 f2b480f82afac149fd9d19c758b5d42b 632 SUPERFAMILY SSF52096 59 262 2.65E-20 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CF65_01992 f2b480f82afac149fd9d19c758b5d42b 632 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 333 545 1.2E-54 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CF65_01992 f2b480f82afac149fd9d19c758b5d42b 632 PIRSF PIRSF001217 10 632 3.6E-214 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CF65_01992 f2b480f82afac149fd9d19c758b5d42b 632 Gene3D G3DSA:3.40.1750.10 192 504 6.5E-156 T 14-10-2018 CF65_01992 f2b480f82afac149fd9d19c758b5d42b 632 Gene3D G3DSA:3.90.226.10 101 320 6.5E-156 T 14-10-2018 CF65_01992 f2b480f82afac149fd9d19c758b5d42b 632 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 18 623 1.8E-218 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CF65_01992 f2b480f82afac149fd9d19c758b5d42b 632 Gene3D G3DSA:3.90.226.10 321 545 6.5E-156 T 14-10-2018 CF65_01992 f2b480f82afac149fd9d19c758b5d42b 632 SUPERFAMILY SSF52096 329 535 2.61E-40 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CF65_01393 af3e3ace1c247b739ff29efc4582bce6 527 SUPERFAMILY SSF52540 267 517 2.34E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01393 af3e3ace1c247b739ff29efc4582bce6 527 SUPERFAMILY SSF90123 2 255 1.96E-36 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_01393 af3e3ace1c247b739ff29efc4582bce6 527 Gene3D G3DSA:1.20.1560.10 31 274 6.2E-114 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_01393 af3e3ace1c247b739ff29efc4582bce6 527 Pfam PF00005 ABC transporter 294 447 2.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01393 af3e3ace1c247b739ff29efc4582bce6 527 Pfam PF00664 ABC transporter transmembrane region 3 221 1.1E-7 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CF65_01393 af3e3ace1c247b739ff29efc4582bce6 527 SMART SM00382 302 499 2.8E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01393 af3e3ace1c247b739ff29efc4582bce6 527 ProSitePatterns PS00211 ABC transporters family signature. 419 433 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01393 af3e3ace1c247b739ff29efc4582bce6 527 Gene3D G3DSA:3.40.50.300 275 518 6.2E-114 T 14-10-2018 CF65_00997 c0c91f0f2a38ffdcaf633b815eb6cbd8 231 Gene3D G3DSA:3.40.50.2300 1 128 1.3E-41 T 14-10-2018 CF65_00997 c0c91f0f2a38ffdcaf633b815eb6cbd8 231 Gene3D G3DSA:1.10.10.10 129 231 9.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00997 c0c91f0f2a38ffdcaf633b815eb6cbd8 231 SUPERFAMILY SSF52172 1 124 3.7E-42 T 14-10-2018 IPR011006 CheY-like superfamily CF65_00997 c0c91f0f2a38ffdcaf633b815eb6cbd8 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 4.8E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CF65_00997 c0c91f0f2a38ffdcaf633b815eb6cbd8 231 SMART SM00448 2 111 3.0E-47 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CF65_00997 c0c91f0f2a38ffdcaf633b815eb6cbd8 231 SMART SM00862 151 227 1.3E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CF65_00997 c0c91f0f2a38ffdcaf633b815eb6cbd8 231 Pfam PF00072 Response regulator receiver domain 4 112 1.0E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CF65_00997 c0c91f0f2a38ffdcaf633b815eb6cbd8 231 SUPERFAMILY SSF46894 131 228 1.19E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CF65_01012 1b539b5c732e7c8092d6da539d12555a 60 Gene3D G3DSA:3.30.70.1680 1 60 1.7E-28 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 CF65_01012 1b539b5c732e7c8092d6da539d12555a 60 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 4.6E-29 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CF65_01012 1b539b5c732e7c8092d6da539d12555a 60 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 60 17.631 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CF65_01012 1b539b5c732e7c8092d6da539d12555a 60 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-19 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CF65_01012 1b539b5c732e7c8092d6da539d12555a 60 SUPERFAMILY SSF117130 1 53 4.58E-21 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 CF65_01012 1b539b5c732e7c8092d6da539d12555a 60 Pfam PF02599 Global regulator protein family 1 52 3.2E-27 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CF65_02648 b5bbf6d9d501a4a4c39bfb6a79c52f3a 376 Gene3D G3DSA:1.10.530.10 114 368 1.9E-70 T 14-10-2018 CF65_02648 b5bbf6d9d501a4a4c39bfb6a79c52f3a 376 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 56 372 5.2E-108 T 14-10-2018 IPR011970 Lytic murein transglycosylase CF65_02648 b5bbf6d9d501a4a4c39bfb6a79c52f3a 376 Gene3D G3DSA:1.10.8.350 173 244 1.9E-70 T 14-10-2018 CF65_02648 b5bbf6d9d501a4a4c39bfb6a79c52f3a 376 Pfam PF13406 Transglycosylase SLT domain 57 369 3.2E-83 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 CF65_02648 b5bbf6d9d501a4a4c39bfb6a79c52f3a 376 SUPERFAMILY SSF53955 55 373 1.18E-84 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily CF65_01571 e1ba937e7616c53dd1d5d37a88b0eafe 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 15 65 2.4E-10 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CF65_01571 e1ba937e7616c53dd1d5d37a88b0eafe 295 SUPERFAMILY SSF161098 89 276 7.03E-15 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01571 e1ba937e7616c53dd1d5d37a88b0eafe 295 Gene3D G3DSA:1.10.3720.10 85 287 1.6E-8 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01571 e1ba937e7616c53dd1d5d37a88b0eafe 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 292 3.0E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_00335 4c6b3d78655fd9d9b2218c9987b02965 554 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 104 187 1.1E-37 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 CF65_00335 4c6b3d78655fd9d9b2218c9987b02965 554 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 105 186 3.3E-14 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CF65_00335 4c6b3d78655fd9d9b2218c9987b02965 554 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 214 549 6.2E-143 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CF65_00335 4c6b3d78655fd9d9b2218c9987b02965 554 Pfam PF02378 Phosphotransferase system, EIIC 230 496 4.2E-19 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CF65_00335 4c6b3d78655fd9d9b2218c9987b02965 554 Gene3D G3DSA:3.40.50.2300 92 203 5.7E-36 T 14-10-2018 CF65_00335 4c6b3d78655fd9d9b2218c9987b02965 554 SUPERFAMILY SSF52794 102 202 2.27E-32 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CF65_00335 4c6b3d78655fd9d9b2218c9987b02965 554 SUPERFAMILY SSF52794 8 85 2.79E-8 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CF65_00725 35c53cac1c8a7eb3047c8f3f60092c73 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.219 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CF65_00725 35c53cac1c8a7eb3047c8f3f60092c73 72 Gene3D G3DSA:2.40.50.140 1 72 1.9E-36 T 14-10-2018 CF65_00725 35c53cac1c8a7eb3047c8f3f60092c73 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.6E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CF65_00725 35c53cac1c8a7eb3047c8f3f60092c73 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 8.5E-39 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CF65_00725 35c53cac1c8a7eb3047c8f3f60092c73 72 SMART SM00316 4 72 6.6E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_00725 35c53cac1c8a7eb3047c8f3f60092c73 72 SUPERFAMILY SSF50249 1 70 1.93E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02718 845e6aae74e0934323f8e33baca43b13 372 Gene3D G3DSA:3.40.50.300 10 228 2.4E-70 T 14-10-2018 CF65_02718 845e6aae74e0934323f8e33baca43b13 372 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02718 845e6aae74e0934323f8e33baca43b13 372 Gene3D G3DSA:2.40.50.940 229 291 5.6E-10 T 14-10-2018 CF65_02718 845e6aae74e0934323f8e33baca43b13 372 Pfam PF08402 TOBE domain 285 366 6.1E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 CF65_02718 845e6aae74e0934323f8e33baca43b13 372 Pfam PF00005 ABC transporter 27 167 1.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02718 845e6aae74e0934323f8e33baca43b13 372 Gene3D G3DSA:2.40.50.140 292 301 5.6E-10 T 14-10-2018 CF65_02718 845e6aae74e0934323f8e33baca43b13 372 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 41 366 6.6E-176 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CF65_02718 845e6aae74e0934323f8e33baca43b13 372 SUPERFAMILY SSF52540 10 250 4.64E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02718 845e6aae74e0934323f8e33baca43b13 372 SMART SM00382 35 218 1.0E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02718 845e6aae74e0934323f8e33baca43b13 372 SUPERFAMILY SSF50331 243 367 1.13E-9 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01319 fbd69157ecf95a256f1c64764e6a5aee 290 Pfam PF01381 Helix-turn-helix 73 127 3.7E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CF65_01319 fbd69157ecf95a256f1c64764e6a5aee 290 Gene3D G3DSA:2.10.109.10 162 289 4.2E-11 T 14-10-2018 CF65_01319 fbd69157ecf95a256f1c64764e6a5aee 290 Pfam PF00717 Peptidase S24-like 204 270 1.1E-11 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_01319 fbd69157ecf95a256f1c64764e6a5aee 290 SUPERFAMILY SSF51306 163 286 1.96E-18 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CF65_01319 fbd69157ecf95a256f1c64764e6a5aee 290 Gene3D G3DSA:1.10.260.40 67 143 9.4E-16 T 14-10-2018 CF65_01319 fbd69157ecf95a256f1c64764e6a5aee 290 SMART SM00530 72 127 6.2E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CF65_01319 fbd69157ecf95a256f1c64764e6a5aee 290 SUPERFAMILY SSF47413 67 133 8.04E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 SUPERFAMILY SSF47917 383 510 2.22E-45 T 14-10-2018 CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 2.8E-14 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.3E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 Gene3D G3DSA:1.20.150.20 383 513 7.7E-48 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 SUPERFAMILY SSF50615 10 94 2.16E-26 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 Gene3D G3DSA:3.40.50.300 94 382 6.4E-133 T 14-10-2018 CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 Gene3D G3DSA:2.40.30.20 1 93 4.1E-31 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.524 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 PIRSF PIRSF039088 1 513 3.7E-233 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 SUPERFAMILY SSF52540 96 381 6.91E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 9.3E-74 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_01486 df5a2112a6859f766c7ea480ba848e3f 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 6.4E-262 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_00944 7a052fc40d497245f3468ba2efb1e939 160 Gene3D G3DSA:1.10.287.180 2 77 9.3E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CF65_00944 7a052fc40d497245f3468ba2efb1e939 160 SUPERFAMILY SSF46557 4 79 1.26E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CF65_00944 7a052fc40d497245f3468ba2efb1e939 160 SUPERFAMILY SSF54534 82 156 4.84E-22 T 14-10-2018 CF65_00944 7a052fc40d497245f3468ba2efb1e939 160 PIRSF PIRSF006092 1 158 3.6E-51 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CF65_00944 7a052fc40d497245f3468ba2efb1e939 160 Gene3D G3DSA:3.10.50.30 78 159 1.4E-31 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CF65_00944 7a052fc40d497245f3468ba2efb1e939 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.1E-24 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CF65_00944 7a052fc40d497245f3468ba2efb1e939 160 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 4.7E-23 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CF65_00944 7a052fc40d497245f3468ba2efb1e939 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CF65_00944 7a052fc40d497245f3468ba2efb1e939 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 28.615 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CF65_00944 7a052fc40d497245f3468ba2efb1e939 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CF65_00944 7a052fc40d497245f3468ba2efb1e939 160 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 5.2E-72 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CF65_00944 7a052fc40d497245f3468ba2efb1e939 160 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 53.962 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CF65_00499 07d35228ddebfaf45ebc3a5e7fbc106f 210 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 210 1.7E-95 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CF65_00499 07d35228ddebfaf45ebc3a5e7fbc106f 210 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 170 210 7.2E-19 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CF65_00499 07d35228ddebfaf45ebc3a5e7fbc106f 210 SUPERFAMILY SSF50475 6 210 1.09E-64 T 14-10-2018 CF65_00499 07d35228ddebfaf45ebc3a5e7fbc106f 210 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 180 193 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CF65_00499 07d35228ddebfaf45ebc3a5e7fbc106f 210 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 117 5.5E-27 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CF65_00499 07d35228ddebfaf45ebc3a5e7fbc106f 210 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 210 37.472 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CF65_00499 07d35228ddebfaf45ebc3a5e7fbc106f 210 PIRSF PIRSF000190 1 210 2.5E-79 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CF65_00499 07d35228ddebfaf45ebc3a5e7fbc106f 210 Gene3D G3DSA:2.30.110.10 2 210 7.3E-82 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CF65_02512 5a4307b03b21d8a55e88f9d2d561d03f 471 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 28 464 4.4E-121 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 CF65_02512 5a4307b03b21d8a55e88f9d2d561d03f 471 ProSitePatterns PS00455 Putative AMP-binding domain signature. 153 164 - T 14-10-2018 IPR020845 AMP-binding, conserved site CF65_02512 5a4307b03b21d8a55e88f9d2d561d03f 471 Gene3D G3DSA:3.30.300.30 371 471 1.7E-13 T 14-10-2018 CF65_02512 5a4307b03b21d8a55e88f9d2d561d03f 471 Pfam PF00501 AMP-binding enzyme 14 374 3.2E-55 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CF65_02512 5a4307b03b21d8a55e88f9d2d561d03f 471 Gene3D G3DSA:3.40.50.12780 7 370 2.1E-64 T 14-10-2018 CF65_02512 5a4307b03b21d8a55e88f9d2d561d03f 471 SUPERFAMILY SSF56801 11 470 1.11E-88 T 14-10-2018 CF65_02006 2982612dd171dfc49b7894de7ac7821f 328 Gene3D G3DSA:3.40.50.2300 62 149 5.9E-21 T 14-10-2018 CF65_02006 2982612dd171dfc49b7894de7ac7821f 328 SUPERFAMILY SSF53822 60 310 5.3E-39 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_02006 2982612dd171dfc49b7894de7ac7821f 328 Pfam PF13407 Periplasmic binding protein domain 64 286 1.3E-13 T 14-10-2018 IPR025997 Periplasmic binding protein CF65_02006 2982612dd171dfc49b7894de7ac7821f 328 Gene3D G3DSA:1.10.260.40 1 61 9.5E-25 T 14-10-2018 CF65_02006 2982612dd171dfc49b7894de7ac7821f 328 SMART SM00354 1 73 5.9E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CF65_02006 2982612dd171dfc49b7894de7ac7821f 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 6.0E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CF65_02006 2982612dd171dfc49b7894de7ac7821f 328 Gene3D G3DSA:3.40.50.2300 156 324 1.4E-24 T 14-10-2018 CF65_02006 2982612dd171dfc49b7894de7ac7821f 328 SUPERFAMILY SSF47413 2 58 1.13E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_01547 68860bebe879df4cf69a70bc990790db 223 SUPERFAMILY SSF51569 2 216 3.14E-82 T 14-10-2018 CF65_01547 68860bebe879df4cf69a70bc990790db 223 PIRSF PIRSF001357 1 221 5.5E-76 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CF65_01547 68860bebe879df4cf69a70bc990790db 223 Gene3D G3DSA:3.20.20.70 1 220 2.4E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_01547 68860bebe879df4cf69a70bc990790db 223 SMART SM01133 5 215 2.5E-100 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CF65_01547 68860bebe879df4cf69a70bc990790db 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 6 213 2.4E-93 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CF65_01547 68860bebe879df4cf69a70bc990790db 223 Pfam PF01791 DeoC/LacD family aldolase 8 212 9.8E-19 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CF65_01547 68860bebe879df4cf69a70bc990790db 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 4 217 36.078 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CF65_01506 51747ede2fff61a5df844322b760b248 170 Gene3D G3DSA:3.10.420.10 1 168 9.2E-61 T 14-10-2018 IPR035958 SecB-like superfamily CF65_01506 51747ede2fff61a5df844322b760b248 170 Hamap MF_00821 Protein-export protein SecB [secB]. 1 155 32.555 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CF65_01506 51747ede2fff61a5df844322b760b248 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 133 151 1.6E-41 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CF65_01506 51747ede2fff61a5df844322b760b248 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 107 129 1.6E-41 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CF65_01506 51747ede2fff61a5df844322b760b248 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 21 38 1.6E-41 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CF65_01506 51747ede2fff61a5df844322b760b248 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 83 103 1.6E-41 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CF65_01506 51747ede2fff61a5df844322b760b248 170 Pfam PF02556 Preprotein translocase subunit SecB 13 153 2.0E-53 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CF65_01506 51747ede2fff61a5df844322b760b248 170 SUPERFAMILY SSF54611 10 151 1.5E-51 T 14-10-2018 IPR035958 SecB-like superfamily CF65_01506 51747ede2fff61a5df844322b760b248 170 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 14 155 9.9E-66 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CF65_01027 11757fb9808d97087829abf6782eaa26 411 Pfam PF00970 Oxidoreductase FAD-binding domain 208 270 2.1E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CF65_01027 11757fb9808d97087829abf6782eaa26 411 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 8 411 2.6E-228 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CF65_01027 11757fb9808d97087829abf6782eaa26 411 Gene3D G3DSA:2.40.30.10 130 268 4.4E-51 T 14-10-2018 CF65_01027 11757fb9808d97087829abf6782eaa26 411 SUPERFAMILY SSF54292 38 128 2.14E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CF65_01027 11757fb9808d97087829abf6782eaa26 411 Pfam PF00175 Oxidoreductase NAD-binding domain 281 390 8.8E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CF65_01027 11757fb9808d97087829abf6782eaa26 411 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 5 411 63.507 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CF65_01027 11757fb9808d97087829abf6782eaa26 411 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 44 118 8.3E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CF65_01027 11757fb9808d97087829abf6782eaa26 411 Gene3D G3DSA:3.40.50.80 279 397 2.1E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CF65_01027 11757fb9808d97087829abf6782eaa26 411 SUPERFAMILY SSF52343 259 406 1.96E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CF65_01027 11757fb9808d97087829abf6782eaa26 411 SUPERFAMILY SSF63380 109 276 1.04E-36 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CF65_01027 11757fb9808d97087829abf6782eaa26 411 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 306 315 3.6E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CF65_01027 11757fb9808d97087829abf6782eaa26 411 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 377 385 3.6E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CF65_01027 11757fb9808d97087829abf6782eaa26 411 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 213 220 3.6E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CF65_01027 11757fb9808d97087829abf6782eaa26 411 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 280 299 3.6E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CF65_01027 11757fb9808d97087829abf6782eaa26 411 PIRSF PIRSF000044 1 411 1.1E-227 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CF65_01027 11757fb9808d97087829abf6782eaa26 411 Gene3D G3DSA:3.10.20.30 38 129 1.1E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 Gene3D G3DSA:1.10.3370.10 11 427 3.9E-160 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 427 3.9E-138 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 431 29.183 T 14-10-2018 IPR026593 Protein translocase subunit SecY CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 Pfam PF00344 SecY translocase 76 414 8.7E-119 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 2.0E-97 T 14-10-2018 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 400 418 2.0E-97 T 14-10-2018 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 2.0E-97 T 14-10-2018 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 313 335 2.0E-97 T 14-10-2018 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 2.0E-97 T 14-10-2018 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 2.0E-97 T 14-10-2018 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 2.0E-97 T 14-10-2018 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 2.0E-97 T 14-10-2018 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 368 386 2.0E-97 T 14-10-2018 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 SUPERFAMILY SSF103491 13 422 1.44E-133 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CF65_01237 3d45262df214c3b95e7e76e585c067d0 441 PIRSF PIRSF004557 7 438 1.2E-125 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CF65_01878 02d7e61873e06d70f08346e0ebe67fd8 233 SMART SM00849 10 163 5.3E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase CF65_01878 02d7e61873e06d70f08346e0ebe67fd8 233 Pfam PF00753 Metallo-beta-lactamase superfamily 39 163 3.0E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase CF65_01878 02d7e61873e06d70f08346e0ebe67fd8 233 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 233 36.585 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CF65_01878 02d7e61873e06d70f08346e0ebe67fd8 233 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 164 233 4.4E-17 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CF65_01878 02d7e61873e06d70f08346e0ebe67fd8 233 Gene3D G3DSA:3.60.15.10 1 233 2.8E-73 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CF65_01878 02d7e61873e06d70f08346e0ebe67fd8 233 SUPERFAMILY SSF56281 3 233 6.5E-54 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CF65_01878 02d7e61873e06d70f08346e0ebe67fd8 233 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 3 227 2.9E-75 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CF65_02758 6146a4993ffcbe54f13c1a11a53b8c04 423 ProSitePatterns PS00104 EPSP synthase signature 1. 73 87 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CF65_02758 6146a4993ffcbe54f13c1a11a53b8c04 423 ProSitePatterns PS00885 EPSP synthase signature 2. 327 345 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CF65_02758 6146a4993ffcbe54f13c1a11a53b8c04 423 Gene3D G3DSA:3.65.10.10 231 410 8.3E-152 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CF65_02758 6146a4993ffcbe54f13c1a11a53b8c04 423 Gene3D G3DSA:3.65.10.10 3 213 8.3E-152 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CF65_02758 6146a4993ffcbe54f13c1a11a53b8c04 423 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 1 417 33.538 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CF65_02758 6146a4993ffcbe54f13c1a11a53b8c04 423 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 1 413 2.4E-139 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CF65_02758 6146a4993ffcbe54f13c1a11a53b8c04 423 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 1 410 3.3E-154 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CF65_02758 6146a4993ffcbe54f13c1a11a53b8c04 423 SUPERFAMILY SSF55205 1 412 1.96E-131 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CF65_02758 6146a4993ffcbe54f13c1a11a53b8c04 423 PIRSF PIRSF000505 1 419 2.7E-146 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CF65_01737 812666303a1d732aa608e05f2aebe859 659 Pfam PF08206 Ribonuclease B OB domain 24 79 1.4E-15 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain CF65_01737 812666303a1d732aa608e05f2aebe859 659 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 658 42.02 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CF65_01737 812666303a1d732aa608e05f2aebe859 659 SMART SM00357 23 78 1.6E-11 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 CF65_01737 812666303a1d732aa608e05f2aebe859 659 Pfam PF00575 S1 RNA binding domain 577 653 6.3E-12 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_01737 812666303a1d732aa608e05f2aebe859 659 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 657 1.2E-245 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CF65_01737 812666303a1d732aa608e05f2aebe859 659 SUPERFAMILY SSF50249 8 79 4.6E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01737 812666303a1d732aa608e05f2aebe859 659 SUPERFAMILY SSF50249 183 571 8.57E-106 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01737 812666303a1d732aa608e05f2aebe859 659 Gene3D G3DSA:2.40.50.640 82 155 5.2E-28 T 14-10-2018 CF65_01737 812666303a1d732aa608e05f2aebe859 659 Pfam PF00773 RNB domain 189 531 8.5E-90 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CF65_01737 812666303a1d732aa608e05f2aebe859 659 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 655 0.0 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CF65_01737 812666303a1d732aa608e05f2aebe859 659 SMART SM00316 574 657 4.1E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_01737 812666303a1d732aa608e05f2aebe859 659 Gene3D G3DSA:2.40.50.140 573 658 9.7E-29 T 14-10-2018 CF65_01737 812666303a1d732aa608e05f2aebe859 659 ProSitePatterns PS01175 Ribonuclease II family signature. 499 523 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site CF65_01737 812666303a1d732aa608e05f2aebe859 659 SUPERFAMILY SSF50249 577 654 1.55E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01737 812666303a1d732aa608e05f2aebe859 659 SUPERFAMILY SSF50249 82 171 1.06E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01737 812666303a1d732aa608e05f2aebe859 659 Gene3D G3DSA:2.40.50.140 1 81 1.6E-25 T 14-10-2018 CF65_01737 812666303a1d732aa608e05f2aebe859 659 SMART SM00955 189 532 1.1E-116 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CF65_01734 fb66724d06f2164a989dd500bd076b61 160 PIRSF PIRSF005900 1 160 1.7E-42 T 14-10-2018 IPR002177 DNA-binding protein Dps CF65_01734 fb66724d06f2164a989dd500bd076b61 160 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 2.6E-12 T 14-10-2018 IPR002177 DNA-binding protein Dps CF65_01734 fb66724d06f2164a989dd500bd076b61 160 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 2.6E-12 T 14-10-2018 IPR002177 DNA-binding protein Dps CF65_01734 fb66724d06f2164a989dd500bd076b61 160 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 2.6E-12 T 14-10-2018 IPR002177 DNA-binding protein Dps CF65_01734 fb66724d06f2164a989dd500bd076b61 160 Gene3D G3DSA:1.20.1260.10 1 154 4.5E-48 T 14-10-2018 IPR012347 Ferritin-like CF65_01734 fb66724d06f2164a989dd500bd076b61 160 SUPERFAMILY SSF47240 2 155 8.37E-41 T 14-10-2018 IPR009078 Ferritin-like superfamily CF65_01734 fb66724d06f2164a989dd500bd076b61 160 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CF65_01734 fb66724d06f2164a989dd500bd076b61 160 Pfam PF00210 Ferritin-like domain 19 155 5.0E-24 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CF65_00107 126f8581318ec005bc037a19921267f7 415 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 1 399 1.7E-156 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CF65_00107 126f8581318ec005bc037a19921267f7 415 SUPERFAMILY SSF52954 317 413 3.27E-23 T 14-10-2018 CF65_00107 126f8581318ec005bc037a19921267f7 415 SUPERFAMILY SSF55681 1 310 7.08E-103 T 14-10-2018 CF65_00107 126f8581318ec005bc037a19921267f7 415 Pfam PF13393 Histidyl-tRNA synthetase 1 302 1.0E-46 T 14-10-2018 CF65_00107 126f8581318ec005bc037a19921267f7 415 Pfam PF03129 Anticodon binding domain 322 412 3.9E-12 T 14-10-2018 IPR004154 Anticodon-binding CF65_00107 126f8581318ec005bc037a19921267f7 415 Gene3D G3DSA:3.30.930.10 1 312 1.4E-114 T 14-10-2018 CF65_00107 126f8581318ec005bc037a19921267f7 415 Gene3D G3DSA:3.40.50.800 317 413 7.8E-24 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily CF65_00107 126f8581318ec005bc037a19921267f7 415 PIRSF PIRSF001549 1 414 8.5E-125 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CF65_00107 126f8581318ec005bc037a19921267f7 415 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 412 32.067 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CF65_00663 7b68a131c7b05196dd2ff1f0c082437e 105 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 98 2.7E-18 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CF65_00663 7b68a131c7b05196dd2ff1f0c082437e 105 Gene3D G3DSA:3.40.640.10 3 102 4.1E-17 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_00663 7b68a131c7b05196dd2ff1f0c082437e 105 SUPERFAMILY SSF53383 6 98 6.31E-14 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00764 55a5ce7a74a59655026d8489238121de 140 SUPERFAMILY SSF56935 5 140 1.87E-15 T 14-10-2018 CF65_00764 55a5ce7a74a59655026d8489238121de 140 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 123 140 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site CF65_00764 55a5ce7a74a59655026d8489238121de 140 Gene3D G3DSA:2.40.170.20 2 140 1.4E-39 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_00764 55a5ce7a74a59655026d8489238121de 140 Pfam PF00593 TonB dependent receptor 3 138 3.3E-13 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_00141 980689363bc2a53fedf7eb0066312a9b 140 SUPERFAMILY SSF53271 1 139 6.69E-47 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like CF65_00141 980689363bc2a53fedf7eb0066312a9b 140 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 1 136 7.5E-62 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CF65_00141 980689363bc2a53fedf7eb0066312a9b 140 Pfam PF00156 Phosphoribosyl transferase domain 1 123 1.7E-22 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CF65_00141 980689363bc2a53fedf7eb0066312a9b 140 Gene3D G3DSA:3.40.50.2020 1 140 1.2E-53 T 14-10-2018 CF65_02152 4cdf7848ca0e9c5acaffef7f5670c9f3 249 Pfam PF00005 ABC transporter 19 168 3.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02152 4cdf7848ca0e9c5acaffef7f5670c9f3 249 SUPERFAMILY SSF52540 3 232 4.92E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02152 4cdf7848ca0e9c5acaffef7f5670c9f3 249 SMART SM00382 28 222 3.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02152 4cdf7848ca0e9c5acaffef7f5670c9f3 249 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02152 4cdf7848ca0e9c5acaffef7f5670c9f3 249 Gene3D G3DSA:3.40.50.300 4 247 1.5E-63 T 14-10-2018 CF65_00806 a67399964a5ca2391f36608685e931bf 130 Gene3D G3DSA:1.20.1300.10 5 130 1.7E-35 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00806 a67399964a5ca2391f36608685e931bf 130 SUPERFAMILY SSF81343 6 129 1.5E-46 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00806 a67399964a5ca2391f36608685e931bf 130 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 14 114 4.0E-27 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CF65_00806 a67399964a5ca2391f36608685e931bf 130 PIRSF PIRSF000180 5 130 2.6E-42 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CF65_00806 a67399964a5ca2391f36608685e931bf 130 Pfam PF02300 Fumarate reductase subunit C 6 129 3.1E-44 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CF65_01502 f24add6ab19d1bc50f52518b1de6322b 265 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 78 238 1.9E-75 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CF65_01502 f24add6ab19d1bc50f52518b1de6322b 265 Pfam PF06426 Serine acetyltransferase, N-terminal 5 109 1.6E-39 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CF65_01502 f24add6ab19d1bc50f52518b1de6322b 265 Gene3D G3DSA:2.160.10.10 139 265 2.5E-39 T 14-10-2018 CF65_01502 f24add6ab19d1bc50f52518b1de6322b 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 189 222 1.1E-8 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_01502 f24add6ab19d1bc50f52518b1de6322b 265 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 198 226 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CF65_01502 f24add6ab19d1bc50f52518b1de6322b 265 Gene3D G3DSA:1.10.3130.10 1 138 5.4E-53 T 14-10-2018 CF65_01502 f24add6ab19d1bc50f52518b1de6322b 265 SUPERFAMILY SSF51161 4 254 1.52E-64 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily CF65_01502 f24add6ab19d1bc50f52518b1de6322b 265 PIRSF PIRSF000441 72 259 4.3E-58 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CF65_01502 f24add6ab19d1bc50f52518b1de6322b 265 PIRSF PIRSF000441 4 60 220.0 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CF65_01502 f24add6ab19d1bc50f52518b1de6322b 265 SMART SM00971 5 109 1.1E-64 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CF65_00473 ca577753fadcb67bea5096a6f4f58fc6 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 2.9E-119 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CF65_00473 ca577753fadcb67bea5096a6f4f58fc6 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.079 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CF65_00473 ca577753fadcb67bea5096a6f4f58fc6 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 2.3E-89 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_00473 ca577753fadcb67bea5096a6f4f58fc6 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_00473 ca577753fadcb67bea5096a6f4f58fc6 334 SUPERFAMILY SSF52374 5 330 3.86E-99 T 14-10-2018 CF65_00473 ca577753fadcb67bea5096a6f4f58fc6 334 Gene3D G3DSA:3.40.50.620 6 329 2.9E-141 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00473 ca577753fadcb67bea5096a6f4f58fc6 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.0E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CF65_00473 ca577753fadcb67bea5096a6f4f58fc6 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.0E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CF65_00473 ca577753fadcb67bea5096a6f4f58fc6 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 3.0E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CF65_00473 ca577753fadcb67bea5096a6f4f58fc6 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 3.0E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CF65_00473 ca577753fadcb67bea5096a6f4f58fc6 334 Gene3D G3DSA:1.10.240.10 186 298 2.9E-141 T 14-10-2018 CF65_02899 79b2b2449356f247e42f0198e648d3c0 332 Gene3D G3DSA:3.40.50.300 8 332 1.7E-96 T 14-10-2018 CF65_02899 79b2b2449356f247e42f0198e648d3c0 332 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02899 79b2b2449356f247e42f0198e648d3c0 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 1.1E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CF65_02899 79b2b2449356f247e42f0198e648d3c0 332 SUPERFAMILY SSF52540 22 263 5.7E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02899 79b2b2449356f247e42f0198e648d3c0 332 SMART SM00382 48 241 7.2E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02899 79b2b2449356f247e42f0198e648d3c0 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 310 4.4E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CF65_02899 79b2b2449356f247e42f0198e648d3c0 332 Pfam PF00005 ABC transporter 39 191 6.9E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01224 d092e2ecfc92aada81b3e13e392abc4a 533 Hamap MF_01227 CTP synthase [pyrG]. 1 529 49.128 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CF65_01224 d092e2ecfc92aada81b3e13e392abc4a 533 Pfam PF00117 Glutamine amidotransferase class-I 290 524 2.1E-65 T 14-10-2018 IPR017926 Glutamine amidotransferase CF65_01224 d092e2ecfc92aada81b3e13e392abc4a 533 Pfam PF06418 CTP synthase N-terminus 1 255 8.1E-119 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CF65_01224 d092e2ecfc92aada81b3e13e392abc4a 533 SUPERFAMILY SSF52540 1 258 5.63E-115 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01224 d092e2ecfc92aada81b3e13e392abc4a 533 SUPERFAMILY SSF52317 278 530 7.99E-90 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like CF65_01224 d092e2ecfc92aada81b3e13e392abc4a 533 TIGRFAM TIGR00337 PyrG: CTP synthase 1 524 1.0E-257 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CF65_01224 d092e2ecfc92aada81b3e13e392abc4a 533 Gene3D G3DSA:3.40.50.300 1 274 5.0E-128 T 14-10-2018 CF65_01224 d092e2ecfc92aada81b3e13e392abc4a 533 Gene3D G3DSA:3.40.50.880 275 533 1.5E-108 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 3.9E-22 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 5.4E-24 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 SMART SM00662 23 234 8.9E-102 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 Gene3D G3DSA:2.170.120.12 53 177 2.7E-84 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.6E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 SUPERFAMILY SSF56553 53 178 2.09E-40 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 SUPERFAMILY SSF47789 251 325 1.18E-25 T 14-10-2018 CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 Gene3D G3DSA:1.10.150.20 244 329 9.0E-39 T 14-10-2018 CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 Gene3D G3DSA:3.30.1360.10 17 228 2.7E-84 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.548 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 SUPERFAMILY SSF55257 7 233 5.59E-30 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_01242 74ca17ad11e306096fddf63ed7fc9d93 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 6.7E-111 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_01698 d39551c141846613de767dbca4267d14 249 SUPERFAMILY SSF100950 73 232 1.36E-23 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_01698 d39551c141846613de767dbca4267d14 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.8E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_01698 d39551c141846613de767dbca4267d14 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.8E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_01698 d39551c141846613de767dbca4267d14 249 Gene3D G3DSA:1.10.10.10 1 58 6.7E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01698 d39551c141846613de767dbca4267d14 249 SMART SM01134 72 230 4.5E-34 T 14-10-2018 CF65_01698 d39551c141846613de767dbca4267d14 249 SUPERFAMILY SSF46785 6 60 4.21E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_01698 d39551c141846613de767dbca4267d14 249 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 1.7E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_01698 d39551c141846613de767dbca4267d14 249 SMART SM00420 6 58 6.3E-20 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_01698 d39551c141846613de767dbca4267d14 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CF65_01698 d39551c141846613de767dbca4267d14 249 Pfam PF00455 DeoR C terminal sensor domain 74 228 3.5E-35 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain CF65_02595 a7ffd006429e84e7e3515f1ce57664f9 430 PIRSF PIRSF000294 119 428 1.0E-86 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 CF65_02595 a7ffd006429e84e7e3515f1ce57664f9 430 PIRSF PIRSF000294 6 42 2.9 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 CF65_02595 a7ffd006429e84e7e3515f1ce57664f9 430 SMART SM01235 1 122 5.6E-46 T 14-10-2018 IPR025992 Haem-binding domain CF65_02595 a7ffd006429e84e7e3515f1ce57664f9 430 SUPERFAMILY SSF46626 284 423 2.51E-33 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CF65_02595 a7ffd006429e84e7e3515f1ce57664f9 430 Gene3D G3DSA:1.10.760.10 148 424 4.2E-102 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CF65_02595 a7ffd006429e84e7e3515f1ce57664f9 430 SUPERFAMILY SSF46626 135 285 1.75E-44 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CF65_02595 a7ffd006429e84e7e3515f1ce57664f9 430 Pfam PF14376 Haem-binding domain 12 119 3.4E-31 T 14-10-2018 IPR025992 Haem-binding domain CF65_02595 a7ffd006429e84e7e3515f1ce57664f9 430 Pfam PF00034 Cytochrome c 304 420 4.3E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CF65_02595 a7ffd006429e84e7e3515f1ce57664f9 430 Gene3D G3DSA:1.10.760.10 151 297 4.2E-102 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CF65_02595 a7ffd006429e84e7e3515f1ce57664f9 430 Pfam PF03150 Di-haem cytochrome c peroxidase 151 297 5.2E-47 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CF65_00665 031c701a687bafb72a301813cf60f275 92 Pfam PF13614 AAA domain 12 61 2.5E-10 T 14-10-2018 IPR025669 AAA domain CF65_00665 031c701a687bafb72a301813cf60f275 92 Gene3D G3DSA:3.40.50.300 2 86 5.7E-15 T 14-10-2018 CF65_00665 031c701a687bafb72a301813cf60f275 92 SUPERFAMILY SSF52540 5 69 2.04E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02039 2b0cc9ed3760d70016ffad33bb8c1c19 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 14-10-2018 CF65_02039 2b0cc9ed3760d70016ffad33bb8c1c19 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02039 2b0cc9ed3760d70016ffad33bb8c1c19 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02039 2b0cc9ed3760d70016ffad33bb8c1c19 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02039 2b0cc9ed3760d70016ffad33bb8c1c19 117 Pfam PF00453 Ribosomal protein L20 3 109 9.1E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02039 2b0cc9ed3760d70016ffad33bb8c1c19 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02039 2b0cc9ed3760d70016ffad33bb8c1c19 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.06 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02039 2b0cc9ed3760d70016ffad33bb8c1c19 117 Gene3D G3DSA:1.10.720.90 2 55 1.4E-24 T 14-10-2018 CF65_02039 2b0cc9ed3760d70016ffad33bb8c1c19 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 7.8E-53 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02039 2b0cc9ed3760d70016ffad33bb8c1c19 117 SUPERFAMILY SSF74731 3 116 3.79E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02039 2b0cc9ed3760d70016ffad33bb8c1c19 117 Gene3D G3DSA:1.10.1900.20 56 117 6.7E-29 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02432 62ab21cac0ddd5dc87c2db97e46e07aa 797 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 169 703 2.2E-154 T 14-10-2018 CF65_02432 62ab21cac0ddd5dc87c2db97e46e07aa 797 Gene3D G3DSA:1.10.3810.10 158 360 1.2E-239 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_02432 62ab21cac0ddd5dc87c2db97e46e07aa 797 SUPERFAMILY SSF56601 318 730 3.69E-106 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CF65_02432 62ab21cac0ddd5dc87c2db97e46e07aa 797 SUPERFAMILY SSF53955 159 357 2.36E-68 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily CF65_02432 62ab21cac0ddd5dc87c2db97e46e07aa 797 Pfam PF00912 Transglycosylase 165 336 9.9E-61 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_02432 62ab21cac0ddd5dc87c2db97e46e07aa 797 Gene3D G3DSA:3.40.710.10 60 718 1.2E-239 T 14-10-2018 CF65_02432 62ab21cac0ddd5dc87c2db97e46e07aa 797 Gene3D G3DSA:3.30.2060.10 68 157 1.2E-239 T 14-10-2018 CF65_02432 62ab21cac0ddd5dc87c2db97e46e07aa 797 Pfam PF00905 Penicillin binding protein transpeptidase domain 430 669 1.3E-19 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CF65_02432 62ab21cac0ddd5dc87c2db97e46e07aa 797 Pfam PF14814 Bifunctional transglycosylase second domain 77 154 2.5E-19 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_02432 62ab21cac0ddd5dc87c2db97e46e07aa 797 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 25 749 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_02432 62ab21cac0ddd5dc87c2db97e46e07aa 797 PIRSF PIRSF002799 1 783 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_01053 df50acc33036930aba598a05a9d6aad5 183 Pfam PF01207 Dihydrouridine synthase (Dus) 1 141 3.0E-37 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CF65_01053 df50acc33036930aba598a05a9d6aad5 183 Gene3D G3DSA:1.20.225.30 104 176 2.4E-22 T 14-10-2018 CF65_01053 df50acc33036930aba598a05a9d6aad5 183 SUPERFAMILY SSF51395 1 171 1.46E-26 T 14-10-2018 CF65_01053 df50acc33036930aba598a05a9d6aad5 183 Gene3D G3DSA:3.20.20.70 1 103 3.2E-29 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_00960 cf6e3c674db84696a837baf185032ac0 628 Gene3D G3DSA:3.10.20.310 154 240 9.1E-30 T 14-10-2018 CF65_00960 cf6e3c674db84696a837baf185032ac0 628 Pfam PF01103 Surface antigen 318 626 8.1E-37 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CF65_00960 cf6e3c674db84696a837baf185032ac0 628 Pfam PF07244 Surface antigen variable number repeat 241 308 1.1E-5 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CF65_00960 cf6e3c674db84696a837baf185032ac0 628 Pfam PF17243 POTRA domain TamA domain 1 76 151 1.1E-16 T 14-10-2018 IPR035243 TamA, POTRA domain 1 CF65_00960 cf6e3c674db84696a837baf185032ac0 628 Gene3D G3DSA:3.10.20.310 74 153 5.8E-20 T 14-10-2018 CF65_00960 cf6e3c674db84696a837baf185032ac0 628 Gene3D G3DSA:2.40.160.50 316 628 7.0E-109 T 14-10-2018 CF65_00960 cf6e3c674db84696a837baf185032ac0 628 Gene3D G3DSA:3.10.20.310 241 315 5.8E-16 T 14-10-2018 CF65_02878 6b56930b75b1cfce8dc49b5216603b86 243 Pfam PF02677 Uncharacterized BCR, COG1636 44 218 6.7E-64 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 CF65_02878 6b56930b75b1cfce8dc49b5216603b86 243 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 44 220 33.722 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 CF65_02878 6b56930b75b1cfce8dc49b5216603b86 243 SUPERFAMILY SSF52402 91 152 3.54E-5 T 14-10-2018 CF65_00383 c6cdd36eeee632753abc0e85a316f894 403 Gene3D G3DSA:1.10.3080.10 1 403 2.0E-80 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 CF65_00383 c6cdd36eeee632753abc0e85a316f894 403 PRINTS PR00762 Chloride channel signature 35 52 3.4E-25 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CF65_00383 c6cdd36eeee632753abc0e85a316f894 403 PRINTS PR00762 Chloride channel signature 340 359 3.4E-25 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CF65_00383 c6cdd36eeee632753abc0e85a316f894 403 PRINTS PR00762 Chloride channel signature 69 88 3.4E-25 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CF65_00383 c6cdd36eeee632753abc0e85a316f894 403 PRINTS PR00762 Chloride channel signature 322 338 3.4E-25 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CF65_00383 c6cdd36eeee632753abc0e85a316f894 403 PRINTS PR00762 Chloride channel signature 292 312 3.4E-25 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CF65_00383 c6cdd36eeee632753abc0e85a316f894 403 PRINTS PR00762 Chloride channel signature 125 144 3.4E-25 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CF65_00383 c6cdd36eeee632753abc0e85a316f894 403 SUPERFAMILY SSF81340 9 393 2.35E-89 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 CF65_00383 c6cdd36eeee632753abc0e85a316f894 403 Pfam PF00654 Voltage gated chloride channel 22 372 8.8E-75 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CF65_01057 bc9e2a6f32ec2fa00b4717493066d000 291 SMART SM00271 224 289 2.3E-18 T 14-10-2018 IPR001623 DnaJ domain CF65_01057 bc9e2a6f32ec2fa00b4717493066d000 291 SUPERFAMILY SSF46565 222 285 1.79E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily CF65_01057 bc9e2a6f32ec2fa00b4717493066d000 291 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 290 38.499 T 14-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 CF65_01057 bc9e2a6f32ec2fa00b4717493066d000 291 Gene3D G3DSA:1.10.3680.10 33 187 6.7E-21 T 14-10-2018 IPR029024 TerB-like CF65_01057 bc9e2a6f32ec2fa00b4717493066d000 291 SUPERFAMILY SSF158682 8 238 1.39E-30 T 14-10-2018 IPR029024 TerB-like CF65_01057 bc9e2a6f32ec2fa00b4717493066d000 291 Pfam PF05099 Tellurite resistance protein TerB 48 174 7.4E-14 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal CF65_01057 bc9e2a6f32ec2fa00b4717493066d000 291 Gene3D G3DSA:1.10.287.110 197 289 1.7E-14 T 14-10-2018 IPR036869 Chaperone J-domain superfamily CF65_01057 bc9e2a6f32ec2fa00b4717493066d000 291 PRINTS PR00625 DnaJ domain signature 245 260 4.7E-8 T 14-10-2018 IPR001623 DnaJ domain CF65_01057 bc9e2a6f32ec2fa00b4717493066d000 291 PRINTS PR00625 DnaJ domain signature 269 289 4.7E-8 T 14-10-2018 IPR001623 DnaJ domain CF65_01057 bc9e2a6f32ec2fa00b4717493066d000 291 PRINTS PR00625 DnaJ domain signature 227 245 4.7E-8 T 14-10-2018 IPR001623 DnaJ domain CF65_01057 bc9e2a6f32ec2fa00b4717493066d000 291 Pfam PF00226 DnaJ domain 225 286 2.9E-11 T 14-10-2018 IPR001623 DnaJ domain CF65_01040 e5a2334fff3921f1ce6a3539dc67a858 197 Pfam PF03923 Uncharacterized lipoprotein 37 192 1.1E-49 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG CF65_00324 069033b4c372cdad311bff378f659624 365 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 346 356 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site CF65_00324 069033b4c372cdad311bff378f659624 365 SUPERFAMILY SSF53335 5 363 2.37E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00324 069033b4c372cdad311bff378f659624 365 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 9 364 1.3E-181 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CF65_00324 069033b4c372cdad311bff378f659624 365 Gene3D G3DSA:3.40.1350.30 43 187 3.6E-141 T 14-10-2018 CF65_00324 069033b4c372cdad311bff378f659624 365 Gene3D G3DSA:3.40.50.150 13 360 3.6E-141 T 14-10-2018 CF65_00324 069033b4c372cdad311bff378f659624 365 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 9 364 1.0E-185 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CF65_00324 069033b4c372cdad311bff378f659624 365 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 297 326 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site CF65_00324 069033b4c372cdad311bff378f659624 365 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 2 364 42.1 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CF65_01679 ee3fb312b07b92bdfde0868fdd8aa242 267 Gene3D G3DSA:3.40.50.720 16 127 1.9E-36 T 14-10-2018 CF65_01679 ee3fb312b07b92bdfde0868fdd8aa242 267 SUPERFAMILY SSF55347 130 253 7.68E-20 T 14-10-2018 CF65_01679 ee3fb312b07b92bdfde0868fdd8aa242 267 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 52 117 1.2E-4 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CF65_01679 ee3fb312b07b92bdfde0868fdd8aa242 267 SUPERFAMILY SSF51735 5 155 5.06E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01679 ee3fb312b07b92bdfde0868fdd8aa242 267 Gene3D G3DSA:3.30.360.10 128 252 1.9E-36 T 14-10-2018 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 SUPERFAMILY SSF53738 261 365 1.37E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 SUPERFAMILY SSF55957 371 454 1.62E-18 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 SUPERFAMILY SSF53738 3 174 8.71E-40 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 Gene3D G3DSA:3.40.120.10 170 252 3.1E-29 T 14-10-2018 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 Gene3D G3DSA:3.30.310.50 372 454 6.1E-25 T 14-10-2018 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 370 1.8E-23 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 SUPERFAMILY SSF53738 151 259 2.43E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 Gene3D G3DSA:3.40.120.10 2 146 6.5E-50 T 14-10-2018 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 Gene3D G3DSA:3.40.120.10 253 370 4.4E-33 T 14-10-2018 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 133 2.5E-32 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 254 6.2E-22 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 453 1.4E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 1.9E-30 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 1.9E-30 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 1.9E-30 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_01013 d0fd7b0a25eeb679703ffb6a10d16deb 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 1.9E-30 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_02688 cc78375de157f918f45cf6f5cb1c02fd 212 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 126 207 2.7E-9 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CF65_02688 cc78375de157f918f45cf6f5cb1c02fd 212 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 10 193 2.0E-50 T 14-10-2018 CF65_00365 d63869c21e5a409ec218bd7dfc46ca4c 91 Gene3D G3DSA:3.30.860.10 1 91 2.2E-43 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00365 d63869c21e5a409ec218bd7dfc46ca4c 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 4.0E-46 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CF65_00365 d63869c21e5a409ec218bd7dfc46ca4c 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00365 d63869c21e5a409ec218bd7dfc46ca4c 91 Pfam PF00203 Ribosomal protein S19 3 83 2.6E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00365 d63869c21e5a409ec218bd7dfc46ca4c 91 SUPERFAMILY SSF54570 3 84 1.83E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00365 d63869c21e5a409ec218bd7dfc46ca4c 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00365 d63869c21e5a409ec218bd7dfc46ca4c 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.2E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00365 d63869c21e5a409ec218bd7dfc46ca4c 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.2E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00365 d63869c21e5a409ec218bd7dfc46ca4c 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.2E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00365 d63869c21e5a409ec218bd7dfc46ca4c 91 PIRSF PIRSF002144 1 91 4.8E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01133 f442c0ba693a48f0774439b058fa84db 146 SUPERFAMILY SSF140931 7 144 1.09E-16 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_01133 f442c0ba693a48f0774439b058fa84db 146 Gene3D G3DSA:1.10.3290.10 2 146 4.1E-31 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_01133 f442c0ba693a48f0774439b058fa84db 146 Pfam PF02661 Fic/DOC family 31 143 2.0E-13 T 14-10-2018 IPR003812 Fido domain CF65_02910 bce683f5dd7d7a9c49d4a2c05a0dce51 963 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 926 960 3.1E-16 T 14-10-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal CF65_02910 bce683f5dd7d7a9c49d4a2c05a0dce51 963 Gene3D G3DSA:3.40.1260.20 400 508 7.3E-41 T 14-10-2018 CF65_02910 bce683f5dd7d7a9c49d4a2c05a0dce51 963 Pfam PF00575 S1 RNA binding domain 36 118 7.2E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_02910 bce683f5dd7d7a9c49d4a2c05a0dce51 963 Gene3D G3DSA:2.40.50.140 31 125 2.1E-31 T 14-10-2018 CF65_02910 bce683f5dd7d7a9c49d4a2c05a0dce51 963 SMART SM00316 37 119 6.6E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_02910 bce683f5dd7d7a9c49d4a2c05a0dce51 963 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 5.9E-171 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CF65_02910 bce683f5dd7d7a9c49d4a2c05a0dce51 963 SUPERFAMILY SSF50249 40 124 3.86E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02910 bce683f5dd7d7a9c49d4a2c05a0dce51 963 Pfam PF10150 Ribonuclease E/G family 121 390 4.5E-94 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CF65_02910 bce683f5dd7d7a9c49d4a2c05a0dce51 963 Hamap MF_00970 Ribonuclease E [rne]. 1 949 34.806 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CF65_00985 48acb8e8fc07c21579c63dbe03e652f1 297 Pfam PF03466 LysR substrate binding domain 90 295 5.2E-29 T 14-10-2018 IPR005119 LysR, substrate-binding CF65_00985 48acb8e8fc07c21579c63dbe03e652f1 297 Gene3D G3DSA:1.10.10.10 4 89 1.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00985 48acb8e8fc07c21579c63dbe03e652f1 297 SUPERFAMILY SSF46785 4 89 4.94E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00985 48acb8e8fc07c21579c63dbe03e652f1 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_00985 48acb8e8fc07c21579c63dbe03e652f1 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_00985 48acb8e8fc07c21579c63dbe03e652f1 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_00985 48acb8e8fc07c21579c63dbe03e652f1 297 SUPERFAMILY SSF53850 90 296 7.42E-32 T 14-10-2018 CF65_00985 48acb8e8fc07c21579c63dbe03e652f1 297 Gene3D G3DSA:3.40.190.290 92 296 1.7E-42 T 14-10-2018 CF65_00985 48acb8e8fc07c21579c63dbe03e652f1 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.2E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_02035 06b155a523767cc8acef1b3dbfb0af73 159 SUPERFAMILY SSF54364 2 66 1.31E-26 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CF65_02035 06b155a523767cc8acef1b3dbfb0af73 159 Gene3D G3DSA:3.10.20.80 1 63 2.7E-29 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CF65_02035 06b155a523767cc8acef1b3dbfb0af73 159 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 64 9.0E-29 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CF65_02035 06b155a523767cc8acef1b3dbfb0af73 159 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 71 157 6.0E-37 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CF65_02035 06b155a523767cc8acef1b3dbfb0af73 159 SUPERFAMILY SSF55200 70 159 7.32E-34 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 CF65_02035 06b155a523767cc8acef1b3dbfb0af73 159 ProSitePatterns PS00938 Initiation factor 3 signature. 46 59 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CF65_02035 06b155a523767cc8acef1b3dbfb0af73 159 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 159 1.1E-72 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CF65_02035 06b155a523767cc8acef1b3dbfb0af73 159 Gene3D G3DSA:3.30.110.10 64 159 4.8E-39 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 CF65_02035 06b155a523767cc8acef1b3dbfb0af73 159 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 159 27.584 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 PIRSF PIRSF001480 1 401 2.4E-104 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 Pfam PF01238 Phosphomannose isomerase type I 5 362 4.3E-60 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 Gene3D G3DSA:1.10.441.10 151 309 9.3E-103 T 14-10-2018 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 Gene3D G3DSA:2.60.120.10 310 388 9.3E-103 T 14-10-2018 IPR014710 RmlC-like jelly roll fold CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 PRINTS PR00714 Phosphomannose isomerase type I signature 34 49 4.7E-50 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 PRINTS PR00714 Phosphomannose isomerase type I signature 264 283 4.7E-50 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 PRINTS PR00714 Phosphomannose isomerase type I signature 7 25 4.7E-50 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 PRINTS PR00714 Phosphomannose isomerase type I signature 127 150 4.7E-50 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 PRINTS PR00714 Phosphomannose isomerase type I signature 283 302 4.7E-50 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 PRINTS PR00714 Phosphomannose isomerase type I signature 245 264 4.7E-50 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 4.7E-50 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 127 135 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 ProDom PD049684 ISOMERASE PHOSPHOMANNOSE MANA HI1710 PMI 355 400 8.0E-6 T 14-10-2018 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 SUPERFAMILY SSF51182 4 390 5.35E-89 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 5 390 1.2E-71 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CF65_01873 da510220a51af9493c77bd5f2adb6ef2 401 Gene3D G3DSA:2.60.120.10 10 284 9.3E-103 T 14-10-2018 IPR014710 RmlC-like jelly roll fold CF65_00417 97e68192385f7e0a88e638233e4e885f 280 Pfam PF03180 NLPA lipoprotein 43 280 6.3E-94 T 14-10-2018 IPR004872 Lipoprotein NlpA family CF65_00417 97e68192385f7e0a88e638233e4e885f 280 Gene3D G3DSA:3.40.190.10 126 230 1.2E-84 T 14-10-2018 CF65_00417 97e68192385f7e0a88e638233e4e885f 280 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 13 280 4.4E-127 T 14-10-2018 IPR004872 Lipoprotein NlpA family CF65_00417 97e68192385f7e0a88e638233e4e885f 280 SUPERFAMILY SSF53850 42 280 1.45E-76 T 14-10-2018 CF65_00417 97e68192385f7e0a88e638233e4e885f 280 Gene3D G3DSA:3.40.190.10 44 273 1.2E-84 T 14-10-2018 CF65_00417 97e68192385f7e0a88e638233e4e885f 280 PIRSF PIRSF002854 1 280 3.2E-93 T 14-10-2018 IPR004872 Lipoprotein NlpA family CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 9 485 5.5E-147 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 Hamap MF_00190 Cardiolipin synthase A [clsA]. 1 485 46.455 T 14-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 Gene3D G3DSA:3.30.870.10 117 300 1.1E-35 T 14-10-2018 CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 Pfam PF13396 Phospholipase_D-nuclease N-terminal 17 58 1.8E-7 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 SUPERFAMILY SSF56024 275 469 2.47E-44 T 14-10-2018 CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 Pfam PF13091 PLD-like domain 133 246 1.2E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 Pfam PF13091 PLD-like domain 329 445 4.5E-25 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 SMART SM00155 398 425 3.8E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 SMART SM00155 218 245 3.5E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 PIRSF PIRSF000850 384 457 0.058 T 14-10-2018 CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 PIRSF PIRSF000850 300 376 0.86 T 14-10-2018 CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 PIRSF PIRSF000850 107 250 0.0086 T 14-10-2018 CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 SUPERFAMILY SSF56024 70 314 1.7E-46 T 14-10-2018 CF65_02060 08a9d2eb7f89351807ff206eb2ff1967 485 Gene3D G3DSA:3.30.870.10 301 483 4.4E-29 T 14-10-2018 CF65_01206 f49f5b6ad19156b8164e83c9843b3d9f 342 Gene3D G3DSA:3.90.650.10 167 341 1.0E-67 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CF65_01206 f49f5b6ad19156b8164e83c9843b3d9f 342 Pfam PF02769 AIR synthase related protein, C-terminal domain 172 336 3.7E-38 T 14-10-2018 IPR010918 PurM-like, C-terminal domain CF65_01206 f49f5b6ad19156b8164e83c9843b3d9f 342 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 6 341 45.298 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CF65_01206 f49f5b6ad19156b8164e83c9843b3d9f 342 Gene3D G3DSA:3.30.1330.10 5 166 2.9E-62 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CF65_01206 f49f5b6ad19156b8164e83c9843b3d9f 342 SUPERFAMILY SSF55326 6 166 7.63E-47 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CF65_01206 f49f5b6ad19156b8164e83c9843b3d9f 342 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 6 331 8.3E-144 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CF65_01206 f49f5b6ad19156b8164e83c9843b3d9f 342 Pfam PF00586 AIR synthase related protein, N-terminal domain 62 160 5.1E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain CF65_01206 f49f5b6ad19156b8164e83c9843b3d9f 342 SUPERFAMILY SSF56042 167 334 1.79E-62 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CF65_00323 11bb4c0721dc989b9ba87b56dd829209 252 Gene3D G3DSA:3.40.1630.10 1 59 9.5E-11 T 14-10-2018 CF65_00323 11bb4c0721dc989b9ba87b56dd829209 252 Gene3D G3DSA:3.40.50.150 60 252 5.8E-72 T 14-10-2018 CF65_00323 11bb4c0721dc989b9ba87b56dd829209 252 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 4 251 37.632 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CF65_00323 11bb4c0721dc989b9ba87b56dd829209 252 SUPERFAMILY SSF53335 3 250 1.52E-72 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00323 11bb4c0721dc989b9ba87b56dd829209 252 Pfam PF04445 Putative SAM-dependent methyltransferase 18 250 2.2E-106 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CF65_00618 fa6f3a7b01fcb7e58c5cf544f892e473 193 SUPERFAMILY SSF53218 5 182 5.76E-45 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily CF65_00618 fa6f3a7b01fcb7e58c5cf544f892e473 193 Pfam PF00994 Probable molybdopterin binding domain 9 148 2.7E-28 T 14-10-2018 IPR001453 MoaB/Mog domain CF65_00618 fa6f3a7b01fcb7e58c5cf544f892e473 193 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 70 83 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CF65_00618 fa6f3a7b01fcb7e58c5cf544f892e473 193 SMART SM00852 8 154 3.0E-22 T 14-10-2018 IPR001453 MoaB/Mog domain CF65_00618 fa6f3a7b01fcb7e58c5cf544f892e473 193 Gene3D G3DSA:3.40.980.10 3 193 5.9E-63 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily CF65_00618 fa6f3a7b01fcb7e58c5cf544f892e473 193 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 5 147 1.2E-39 T 14-10-2018 IPR001453 MoaB/Mog domain CF65_02315 74f787427b2d60ab4ff0ff91d1b3fcda 397 Gene3D G3DSA:1.10.10.2510 212 390 1.9E-12 T 14-10-2018 CF65_02315 74f787427b2d60ab4ff0ff91d1b3fcda 397 SUPERFAMILY SSF51197 8 285 7.55E-62 T 14-10-2018 CF65_02315 74f787427b2d60ab4ff0ff91d1b3fcda 397 Gene3D G3DSA:2.60.120.650 2 211 1.6E-67 T 14-10-2018 CF65_02315 74f787427b2d60ab4ff0ff91d1b3fcda 397 SMART SM00558 83 222 1.3E-5 T 14-10-2018 IPR003347 JmjC domain CF65_02315 74f787427b2d60ab4ff0ff91d1b3fcda 397 Pfam PF08007 Cupin superfamily protein 12 320 1.6E-89 T 14-10-2018 IPR003347 JmjC domain CF65_01598 4687d18efc8d9bbc34063c3108408479 311 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 6 303 37.784 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CF65_01598 4687d18efc8d9bbc34063c3108408479 311 Gene3D G3DSA:1.10.40.50 239 310 3.8E-25 T 14-10-2018 CF65_01598 4687d18efc8d9bbc34063c3108408479 311 Gene3D G3DSA:2.40.50.140 1 66 5.6E-22 T 14-10-2018 CF65_01598 4687d18efc8d9bbc34063c3108408479 311 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 296 2.8E-96 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CF65_01598 4687d18efc8d9bbc34063c3108408479 311 SUPERFAMILY SSF52540 78 299 3.31E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01598 4687d18efc8d9bbc34063c3108408479 311 Pfam PF03193 RsgA GTPase 64 239 8.7E-59 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CF65_01598 4687d18efc8d9bbc34063c3108408479 311 Gene3D G3DSA:3.40.50.300 67 238 2.8E-50 T 14-10-2018 CF65_00325 879f282a02c0cf6dfcd488e471e4010b 109 Pfam PF04219 Protein of unknown function, DUF 10 97 1.7E-36 T 14-10-2018 IPR007335 Protein of unknown function DUF413 CF65_00302 cc5c8af6fbc22ea08b66351d98c0d9f5 333 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 19 204 2.6E-61 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00302 cc5c8af6fbc22ea08b66351d98c0d9f5 333 Gene3D G3DSA:3.40.50.300 8 173 7.1E-49 T 14-10-2018 CF65_00302 cc5c8af6fbc22ea08b66351d98c0d9f5 333 Gene3D G3DSA:1.20.272.10 217 330 1.7E-11 T 14-10-2018 CF65_00302 cc5c8af6fbc22ea08b66351d98c0d9f5 333 SUPERFAMILY SSF52540 11 211 2.86E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00302 cc5c8af6fbc22ea08b66351d98c0d9f5 333 SUPERFAMILY SSF48019 216 332 1.65E-29 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CF65_00302 cc5c8af6fbc22ea08b66351d98c0d9f5 333 Pfam PF13177 DNA polymerase III, delta subunit 17 171 6.7E-43 T 14-10-2018 CF65_00302 cc5c8af6fbc22ea08b66351d98c0d9f5 333 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 217 326 2.1E-28 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_02916 76b13e4c760771299b6fa78e6485bfb1 331 SUPERFAMILY SSF51735 102 298 1.24E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02916 76b13e4c760771299b6fa78e6485bfb1 331 SUPERFAMILY SSF52283 2 135 2.27E-44 T 14-10-2018 CF65_02916 76b13e4c760771299b6fa78e6485bfb1 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CF65_02916 76b13e4c760771299b6fa78e6485bfb1 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CF65_02916 76b13e4c760771299b6fa78e6485bfb1 331 Gene3D G3DSA:3.40.50.720 2 316 2.0E-138 T 14-10-2018 CF65_02916 76b13e4c760771299b6fa78e6485bfb1 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CF65_02916 76b13e4c760771299b6fa78e6485bfb1 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 2.6E-55 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CF65_02916 76b13e4c760771299b6fa78e6485bfb1 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 328 7.7E-35 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CF65_02916 76b13e4c760771299b6fa78e6485bfb1 331 Gene3D G3DSA:3.40.50.720 102 297 2.0E-138 T 14-10-2018 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 Gene3D G3DSA:3.40.50.300 314 491 9.2E-61 T 14-10-2018 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 Gene3D G3DSA:1.20.58.1480 123 246 2.2E-37 T 14-10-2018 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 Gene3D G3DSA:3.30.230.10 586 773 3.2E-85 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 Gene3D G3DSA:1.10.8.60 492 585 5.5E-34 T 14-10-2018 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 SMART SM00464 11 203 4.6E-69 T 14-10-2018 IPR003111 Lon, substrate-binding domain CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 PIRSF PIRSF001174 1 776 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 Hamap MF_01973 Lon protease [lon]. 12 773 70.269 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 490 3.0E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 SUPERFAMILY SSF52540 314 587 4.87E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 677 685 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 SMART SM00382 349 493 1.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 SUPERFAMILY SSF54211 596 771 1.93E-58 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 SUPERFAMILY SSF88697 11 202 2.98E-47 T 14-10-2018 IPR015947 PUA-like superfamily CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 202 9.2E-44 T 14-10-2018 IPR003111 Lon, substrate-binding domain CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 TIGRFAM TIGR00763 lon: endopeptidase La 13 771 1.9E-304 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 Gene3D G3DSA:2.30.130.40 1 118 7.9E-35 T 14-10-2018 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 376 1.9E-56 T 14-10-2018 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 596 612 1.9E-56 T 14-10-2018 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 727 745 1.9E-56 T 14-10-2018 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 674 693 1.9E-56 T 14-10-2018 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 704 723 1.9E-56 T 14-10-2018 CF65_02395 24a69031c72e61f04d2e02aa63326af2 805 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 773 2.7E-98 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CF65_01666 b4f9087a5ed60d49f763d9d3ce8ad3a6 437 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 12 408 4.0E-163 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_01666 b4f9087a5ed60d49f763d9d3ce8ad3a6 437 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 23 42 1.0E-38 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_01666 b4f9087a5ed60d49f763d9d3ce8ad3a6 437 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 321 335 1.0E-38 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_01666 b4f9087a5ed60d49f763d9d3ce8ad3a6 437 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 385 398 1.0E-38 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_01666 b4f9087a5ed60d49f763d9d3ce8ad3a6 437 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 248 270 1.0E-38 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_01666 b4f9087a5ed60d49f763d9d3ce8ad3a6 437 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 306 320 1.0E-38 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_01666 b4f9087a5ed60d49f763d9d3ce8ad3a6 437 SUPERFAMILY SSF56601 2 432 2.47E-99 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CF65_01666 b4f9087a5ed60d49f763d9d3ce8ad3a6 437 Gene3D G3DSA:3.40.710.10 1 50 4.0E-6 T 14-10-2018 CF65_01666 b4f9087a5ed60d49f763d9d3ce8ad3a6 437 Gene3D G3DSA:3.40.710.10 208 437 5.7E-64 T 14-10-2018 CF65_01666 b4f9087a5ed60d49f763d9d3ce8ad3a6 437 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 2 428 8.0E-155 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_01666 b4f9087a5ed60d49f763d9d3ce8ad3a6 437 Gene3D G3DSA:3.50.80.20 51 147 6.3E-23 T 14-10-2018 CF65_02352 99d5a6f20fb6ffcf44217ace9b67f639 489 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 18 183 1.4E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_02352 99d5a6f20fb6ffcf44217ace9b67f639 489 Gene3D G3DSA:3.40.190.120 325 427 1.7E-76 T 14-10-2018 CF65_02352 99d5a6f20fb6ffcf44217ace9b67f639 489 SUPERFAMILY SSF53850 217 486 1.55E-56 T 14-10-2018 CF65_02352 99d5a6f20fb6ffcf44217ace9b67f639 489 Gene3D G3DSA:3.40.190.10 227 488 1.7E-76 T 14-10-2018 CF65_02352 99d5a6f20fb6ffcf44217ace9b67f639 489 Gene3D G3DSA:1.10.3720.10 1 190 2.6E-30 T 14-10-2018 IPR035906 MetI-like superfamily CF65_02352 99d5a6f20fb6ffcf44217ace9b67f639 489 SUPERFAMILY SSF161098 2 176 1.31E-34 T 14-10-2018 IPR035906 MetI-like superfamily CF65_02352 99d5a6f20fb6ffcf44217ace9b67f639 489 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 217 485 1.0E-47 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 CF65_02702 f3efc3e9559ecff54408619eb7c478cb 389 Pfam PF08442 ATP-grasp domain 2 203 2.3E-79 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CF65_02702 f3efc3e9559ecff54408619eb7c478cb 389 PIRSF PIRSF001554 1 388 1.7E-148 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CF65_02702 f3efc3e9559ecff54408619eb7c478cb 389 Pfam PF00549 CoA-ligase 262 380 5.0E-25 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CF65_02702 f3efc3e9559ecff54408619eb7c478cb 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.777 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CF65_02702 f3efc3e9559ecff54408619eb7c478cb 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 8.9E-170 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CF65_02702 f3efc3e9559ecff54408619eb7c478cb 389 Gene3D G3DSA:3.30.1490.20 21 104 6.9E-90 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CF65_02702 f3efc3e9559ecff54408619eb7c478cb 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CF65_02702 f3efc3e9559ecff54408619eb7c478cb 389 SUPERFAMILY SSF56059 1 237 9.43E-78 T 14-10-2018 CF65_02702 f3efc3e9559ecff54408619eb7c478cb 389 Gene3D G3DSA:3.30.470.20 1 234 6.9E-90 T 14-10-2018 CF65_02702 f3efc3e9559ecff54408619eb7c478cb 389 SUPERFAMILY SSF52210 240 380 3.66E-52 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CF65_02702 f3efc3e9559ecff54408619eb7c478cb 389 Gene3D G3DSA:3.40.50.261 240 388 6.4E-54 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CF65_01484 b6b178fdbf42793d76c86da6a2281945 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 36.228 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01484 b6b178fdbf42793d76c86da6a2281945 289 Gene3D G3DSA:1.10.287.80 6 285 2.6E-107 T 14-10-2018 CF65_01484 b6b178fdbf42793d76c86da6a2281945 289 Gene3D G3DSA:3.40.1380.10 61 208 2.6E-107 T 14-10-2018 CF65_01484 b6b178fdbf42793d76c86da6a2281945 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 8.0E-111 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01484 b6b178fdbf42793d76c86da6a2281945 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01484 b6b178fdbf42793d76c86da6a2281945 289 Pfam PF00231 ATP synthase 5 288 4.6E-96 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01484 b6b178fdbf42793d76c86da6a2281945 289 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.1E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01484 b6b178fdbf42793d76c86da6a2281945 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 1.1E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01484 b6b178fdbf42793d76c86da6a2281945 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 1.1E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01484 b6b178fdbf42793d76c86da6a2281945 289 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.1E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01484 b6b178fdbf42793d76c86da6a2281945 289 SUPERFAMILY SSF52943 2 289 7.46E-95 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01848 94790b100a3935ce696e629c84e6e7e3 445 Gene3D G3DSA:1.10.287.400 378 442 8.8E-31 T 14-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CF65_01848 94790b100a3935ce696e629c84e6e7e3 445 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 130 141 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CF65_01848 94790b100a3935ce696e629c84e6e7e3 445 Gene3D G3DSA:3.90.1260.10 75 368 4.7E-116 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CF65_01848 94790b100a3935ce696e629c84e6e7e3 445 Gene3D G3DSA:3.40.50.620 15 192 4.7E-116 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01848 94790b100a3935ce696e629c84e6e7e3 445 SUPERFAMILY SSF69864 191 442 6.41E-79 T 14-10-2018 CF65_01848 94790b100a3935ce696e629c84e6e7e3 445 SUPERFAMILY SSF52402 5 188 1.39E-32 T 14-10-2018 CF65_01848 94790b100a3935ce696e629c84e6e7e3 445 TIGRFAM TIGR00032 argG: argininosuccinate synthase 14 420 7.4E-160 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CF65_01848 94790b100a3935ce696e629c84e6e7e3 445 Hamap MF_00581 Argininosuccinate synthase [argG]. 2 445 69.75 T 14-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CF65_01848 94790b100a3935ce696e629c84e6e7e3 445 Pfam PF00764 Arginosuccinate synthase 17 410 4.8E-58 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CF65_01848 94790b100a3935ce696e629c84e6e7e3 445 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 18 26 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CF65_00737 e41d80d59552e432094c919bae8dd46e 500 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 33 498 9.4E-268 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CF65_00737 e41d80d59552e432094c919bae8dd46e 500 SUPERFAMILY SSF100950 232 498 1.88E-60 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_00737 e41d80d59552e432094c919bae8dd46e 500 Gene3D G3DSA:3.40.1080.10 2 229 9.1E-98 T 14-10-2018 CF65_00737 e41d80d59552e432094c919bae8dd46e 500 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 23 500 2.2E-264 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CF65_00737 e41d80d59552e432094c919bae8dd46e 500 Gene3D G3DSA:3.40.1080.10 231 500 1.1E-123 T 14-10-2018 CF65_00737 e41d80d59552e432094c919bae8dd46e 500 PIRSF PIRSF009451 1 500 2.6E-267 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CF65_00737 e41d80d59552e432094c919bae8dd46e 500 SUPERFAMILY SSF100950 28 229 3.28E-75 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_01668 21ee207ac884b41160545e620a3c44ff 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.813 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CF65_01668 21ee207ac884b41160545e620a3c44ff 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CF65_01668 21ee207ac884b41160545e620a3c44ff 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 3.9E-30 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CF65_01668 21ee207ac884b41160545e620a3c44ff 158 Gene3D G3DSA:3.10.50.30 76 158 9.0E-31 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CF65_01668 21ee207ac884b41160545e620a3c44ff 158 SUPERFAMILY SSF46557 3 78 3.53E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CF65_01668 21ee207ac884b41160545e620a3c44ff 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CF65_01668 21ee207ac884b41160545e620a3c44ff 158 Gene3D G3DSA:1.10.287.180 1 75 2.9E-31 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CF65_01668 21ee207ac884b41160545e620a3c44ff 158 SUPERFAMILY SSF54534 82 157 1.29E-23 T 14-10-2018 CF65_01668 21ee207ac884b41160545e620a3c44ff 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.7E-27 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CF65_01668 21ee207ac884b41160545e620a3c44ff 158 PIRSF PIRSF006092 1 158 3.1E-52 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CF65_01668 21ee207ac884b41160545e620a3c44ff 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 5.8E-58 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CF65_02865 5e675dbbbc3ffc80cb0bdac650f9a1c0 650 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 633 650 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site CF65_02865 5e675dbbbc3ffc80cb0bdac650f9a1c0 650 Gene3D G3DSA:2.170.130.10 31 141 2.0E-36 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_02865 5e675dbbbc3ffc80cb0bdac650f9a1c0 650 Gene3D G3DSA:2.40.170.20 142 650 2.9E-169 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_02865 5e675dbbbc3ffc80cb0bdac650f9a1c0 650 SUPERFAMILY SSF56935 39 650 2.17E-83 T 14-10-2018 CF65_02865 5e675dbbbc3ffc80cb0bdac650f9a1c0 650 Pfam PF07715 TonB-dependent Receptor Plug Domain 36 136 1.7E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain CF65_02865 5e675dbbbc3ffc80cb0bdac650f9a1c0 650 Pfam PF00593 TonB dependent receptor 212 649 1.7E-49 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_02393 2b373a897e65855bf8ad4059fdbe1e46 584 SUPERFAMILY SSF52091 464 572 1.06E-15 T 14-10-2018 IPR036513 STAS domain superfamily CF65_02393 2b373a897e65855bf8ad4059fdbe1e46 584 TIGRFAM TIGR00815 sulP: sulfate permease 28 564 2.5E-120 T 14-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 CF65_02393 2b373a897e65855bf8ad4059fdbe1e46 584 Pfam PF00916 Sulfate permease family 34 420 8.5E-82 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CF65_02393 2b373a897e65855bf8ad4059fdbe1e46 584 Gene3D G3DSA:3.30.750.24 453 572 6.5E-21 T 14-10-2018 IPR036513 STAS domain superfamily CF65_02393 2b373a897e65855bf8ad4059fdbe1e46 584 Pfam PF01740 STAS domain 463 567 2.8E-15 T 14-10-2018 IPR002645 STAS domain CF65_02666 2ef3f48102e45945afe4bccdc3f55899 698 Pfam PF00580 UvrD/REP helicase N-terminal domain 1 248 1.1E-72 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CF65_02666 2ef3f48102e45945afe4bccdc3f55899 698 TIGRFAM TIGR01075 uvrD: DNA helicase II 1 696 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 CF65_02666 2ef3f48102e45945afe4bccdc3f55899 698 Gene3D G3DSA:1.10.486.10 359 515 9.3E-132 T 14-10-2018 CF65_02666 2ef3f48102e45945afe4bccdc3f55899 698 Gene3D G3DSA:3.40.50.300 258 613 9.3E-132 T 14-10-2018 CF65_02666 2ef3f48102e45945afe4bccdc3f55899 698 Gene3D G3DSA:3.40.50.300 1 251 6.6E-93 T 14-10-2018 CF65_02666 2ef3f48102e45945afe4bccdc3f55899 698 SUPERFAMILY SSF52540 1 619 1.72E-168 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02666 2ef3f48102e45945afe4bccdc3f55899 698 Pfam PF13361 UvrD-like helicase C-terminal domain 254 593 8.9E-84 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CF65_02666 2ef3f48102e45945afe4bccdc3f55899 698 Gene3D G3DSA:1.10.10.160 91 164 6.6E-93 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily CF65_00425 fe6c7be7c575d7194444026525a26a96 233 SUPERFAMILY SSF54211 1 158 2.5E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00425 fe6c7be7c575d7194444026525a26a96 233 Gene3D G3DSA:3.30.230.10 1 160 4.8E-8 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00425 fe6c7be7c575d7194444026525a26a96 233 Pfam PF01078 Magnesium chelatase, subunit ChlI 183 232 1.0E-20 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain CF65_00425 fe6c7be7c575d7194444026525a26a96 233 Gene3D G3DSA:3.40.50.300 170 233 2.0E-19 T 14-10-2018 CF65_00425 fe6c7be7c575d7194444026525a26a96 233 Pfam PF13541 Subunit ChlI of Mg-chelatase 10 131 1.3E-44 T 14-10-2018 CF65_00425 fe6c7be7c575d7194444026525a26a96 233 SUPERFAMILY SSF52540 181 229 1.5E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00679 b9fe54714eccc448da9660794b0b0672 491 Pfam PF10150 Ribonuclease E/G family 125 394 5.1E-100 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CF65_00679 b9fe54714eccc448da9660794b0b0672 491 Gene3D G3DSA:3.40.1260.20 404 488 5.3E-8 T 14-10-2018 CF65_00679 b9fe54714eccc448da9660794b0b0672 491 SMART SM00316 38 123 4.1E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_00679 b9fe54714eccc448da9660794b0b0672 491 SUPERFAMILY SSF50249 40 129 7.04E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_00679 b9fe54714eccc448da9660794b0b0672 491 Pfam PF00575 S1 RNA binding domain 39 110 1.1E-5 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_00679 b9fe54714eccc448da9660794b0b0672 491 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 15 427 1.2E-169 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CF65_00679 b9fe54714eccc448da9660794b0b0672 491 Gene3D G3DSA:2.40.50.140 32 128 2.0E-31 T 14-10-2018 CF65_00711 939de54b801682b39e871f9ae6acf8a7 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 5.2E-27 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CF65_00711 939de54b801682b39e871f9ae6acf8a7 107 Gene3D G3DSA:2.60.300.12 2 107 5.5E-39 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CF65_00711 939de54b801682b39e871f9ae6acf8a7 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 9.3E-39 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CF65_00711 939de54b801682b39e871f9ae6acf8a7 107 SUPERFAMILY SSF89360 1 96 5.89E-34 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CF65_00711 939de54b801682b39e871f9ae6acf8a7 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CF65_00711 939de54b801682b39e871f9ae6acf8a7 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.8E-59 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CF65_02463 36cf18a1bd52a9d403d80917f481a836 360 SUPERFAMILY SSF51556 34 329 6.81E-92 T 14-10-2018 IPR032466 Metal-dependent hydrolase CF65_02463 36cf18a1bd52a9d403d80917f481a836 360 Gene3D G3DSA:2.30.40.10 1 355 2.4E-118 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CF65_02463 36cf18a1bd52a9d403d80917f481a836 360 SUPERFAMILY SSF51338 1 358 1.82E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CF65_02463 36cf18a1bd52a9d403d80917f481a836 360 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 355 8.0E-166 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CF65_02463 36cf18a1bd52a9d403d80917f481a836 360 Pfam PF01979 Amidohydrolase family 31 357 2.6E-46 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CF65_02463 36cf18a1bd52a9d403d80917f481a836 360 PIRSF PIRSF038994 1 360 5.7E-107 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CF65_02463 36cf18a1bd52a9d403d80917f481a836 360 Gene3D G3DSA:3.20.20.140 35 323 2.4E-118 T 14-10-2018 CF65_01865 4f9a31f98c174abe2ffd17f12732cf01 334 Gene3D G3DSA:3.40.190.10 29 302 2.8E-86 T 14-10-2018 CF65_01865 4f9a31f98c174abe2ffd17f12732cf01 334 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 10 334 1.2E-159 T 14-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 CF65_01865 4f9a31f98c174abe2ffd17f12732cf01 334 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 24 328 6.0E-125 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 CF65_01865 4f9a31f98c174abe2ffd17f12732cf01 334 SUPERFAMILY SSF53850 26 329 2.06E-51 T 14-10-2018 CF65_01865 4f9a31f98c174abe2ffd17f12732cf01 334 Gene3D G3DSA:3.40.190.10 129 329 2.8E-86 T 14-10-2018 CF65_01865 4f9a31f98c174abe2ffd17f12732cf01 334 Pfam PF13416 Bacterial extracellular solute-binding protein 56 291 1.8E-16 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein CF65_02990 1d2245c7e3f5edd01f7088b85129855e 348 Gene3D G3DSA:3.20.20.300 1 348 3.7E-121 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 CF65_02990 1d2245c7e3f5edd01f7088b85129855e 348 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 341 47.804 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 CF65_02990 1d2245c7e3f5edd01f7088b85129855e 348 SUPERFAMILY SSF51445 3 291 3.37E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily CF65_02990 1d2245c7e3f5edd01f7088b85129855e 348 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 12 299 7.2E-94 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CF65_00749 b4749db3f91d6dc9b46a8c233378fd82 302 SUPERFAMILY SSF53822 26 296 8.64E-80 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_00749 b4749db3f91d6dc9b46a8c233378fd82 302 SMART SM00354 1 36 5.1E-4 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CF65_00749 b4749db3f91d6dc9b46a8c233378fd82 302 Pfam PF13377 Periplasmic binding protein-like domain 134 293 8.9E-33 T 14-10-2018 CF65_00749 b4749db3f91d6dc9b46a8c233378fd82 302 Gene3D G3DSA:3.40.50.2300 24 269 3.7E-68 T 14-10-2018 CF65_00749 b4749db3f91d6dc9b46a8c233378fd82 302 Gene3D G3DSA:3.40.50.2300 125 254 3.7E-68 T 14-10-2018 CF65_02848 c39dd7a7099029bf1dedb3662cdfeff0 246 Gene3D G3DSA:3.30.70.980 86 235 3.0E-59 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CF65_02848 c39dd7a7099029bf1dedb3662cdfeff0 246 Pfam PF01709 Transcriptional regulator 5 235 1.0E-92 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CF65_02848 c39dd7a7099029bf1dedb3662cdfeff0 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.196 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CF65_02848 c39dd7a7099029bf1dedb3662cdfeff0 246 SUPERFAMILY SSF75625 3 244 1.14E-96 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CF65_02848 c39dd7a7099029bf1dedb3662cdfeff0 246 Gene3D G3DSA:3.30.70.980 130 204 3.0E-59 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CF65_02848 c39dd7a7099029bf1dedb3662cdfeff0 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.6E-106 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CF65_02848 c39dd7a7099029bf1dedb3662cdfeff0 246 Gene3D G3DSA:1.10.10.200 1 81 1.4E-34 T 14-10-2018 IPR017856 Integrase-like, N-terminal CF65_01867 e9abd76854b5d1f84d4e3a66adc1639e 215 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 214 1.0E-103 T 14-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 CF65_01867 e9abd76854b5d1f84d4e3a66adc1639e 215 Pfam PF00005 ABC transporter 18 157 3.5E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01867 e9abd76854b5d1f84d4e3a66adc1639e 215 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01867 e9abd76854b5d1f84d4e3a66adc1639e 215 Gene3D G3DSA:3.40.50.300 6 215 1.8E-62 T 14-10-2018 CF65_01867 e9abd76854b5d1f84d4e3a66adc1639e 215 SUPERFAMILY SSF52540 1 211 8.77E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01867 e9abd76854b5d1f84d4e3a66adc1639e 215 SMART SM00382 24 207 3.3E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 SMART SM00316 649 732 6.2E-14 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 Pfam PF00575 S1 RNA binding domain 649 730 5.0E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 SUPERFAMILY SSF50249 75 154 8.29E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 Hamap MF_01895 Ribonuclease R [rnr]. 46 732 57.588 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 Pfam PF08206 Ribonuclease B OB domain 95 151 2.0E-21 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 Pfam PF08461 Ribonuclease R winged-helix domain 31 93 1.5E-11 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 SUPERFAMILY SSF50249 148 245 4.8E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 SUPERFAMILY SSF50249 651 731 3.85E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 SMART SM00357 94 153 8.3E-8 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 TIGRFAM TIGR02063 RNase_R: ribonuclease R 27 732 3.1E-275 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 Gene3D G3DSA:2.40.50.140 77 156 1.2E-16 T 14-10-2018 CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 SMART SM00955 268 595 8.6E-187 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 75 732 4.0E-272 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 Pfam PF00773 RNB domain 268 594 2.0E-109 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 SUPERFAMILY SSF50249 229 649 5.2E-145 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01372 9fb3347cf17334aa83ad7ef10db8b018 801 Gene3D G3DSA:2.40.50.140 652 800 1.4E-24 T 14-10-2018 CF65_00723 38cab5a83281e6cb26de0eaa8999d90a 435 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 107 424 3.6E-100 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CF65_00723 38cab5a83281e6cb26de0eaa8999d90a 435 PIRSF PIRSF036388 1 434 9.4E-230 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CF65_00723 38cab5a83281e6cb26de0eaa8999d90a 435 SUPERFAMILY SSF53187 104 430 1.07E-97 T 14-10-2018 CF65_00723 38cab5a83281e6cb26de0eaa8999d90a 435 PRINTS PR00481 Cytosol aminopeptidase signature 193 210 3.4E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CF65_00723 38cab5a83281e6cb26de0eaa8999d90a 435 PRINTS PR00481 Cytosol aminopeptidase signature 215 236 3.4E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CF65_00723 38cab5a83281e6cb26de0eaa8999d90a 435 PRINTS PR00481 Cytosol aminopeptidase signature 252 273 3.4E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CF65_00723 38cab5a83281e6cb26de0eaa8999d90a 435 PRINTS PR00481 Cytosol aminopeptidase signature 302 317 3.4E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CF65_00723 38cab5a83281e6cb26de0eaa8999d90a 435 PRINTS PR00481 Cytosol aminopeptidase signature 274 294 3.4E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CF65_00723 38cab5a83281e6cb26de0eaa8999d90a 435 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 278 285 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CF65_00723 38cab5a83281e6cb26de0eaa8999d90a 435 Pfam PF12404 Peptidase 3 79 9.4E-35 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CF65_00723 38cab5a83281e6cb26de0eaa8999d90a 435 Gene3D G3DSA:3.40.630.10 91 434 8.8E-101 T 14-10-2018 CF65_01241 19c2e0e0359f0ab124d2e3e34dab2882 206 SUPERFAMILY SSF55174 3 206 1.3E-72 T 14-10-2018 CF65_01241 19c2e0e0359f0ab124d2e3e34dab2882 206 Gene3D G3DSA:1.10.1050.10 6 206 5.0E-80 T 14-10-2018 CF65_01241 19c2e0e0359f0ab124d2e3e34dab2882 206 Gene3D G3DSA:3.10.290.10 95 191 5.0E-80 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CF65_01241 19c2e0e0359f0ab124d2e3e34dab2882 206 SMART SM01390 3 95 7.8E-49 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CF65_01241 19c2e0e0359f0ab124d2e3e34dab2882 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.5E-32 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CF65_01241 19c2e0e0359f0ab124d2e3e34dab2882 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 6.3E-87 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CF65_01241 19c2e0e0359f0ab124d2e3e34dab2882 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.419 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CF65_01241 19c2e0e0359f0ab124d2e3e34dab2882 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01241 19c2e0e0359f0ab124d2e3e34dab2882 206 SMART SM00363 96 160 7.9E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01241 19c2e0e0359f0ab124d2e3e34dab2882 206 Pfam PF01479 S4 domain 97 143 1.6E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00420 bca53ffcf53440960d201b4c4641df6f 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 33.969 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CF65_00420 bca53ffcf53440960d201b4c4641df6f 158 Gene3D G3DSA:3.40.1280.10 1 158 1.1E-70 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_00420 bca53ffcf53440960d201b4c4641df6f 158 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 2.8E-73 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CF65_00420 bca53ffcf53440960d201b4c4641df6f 158 PIRSF PIRSF029256 1 154 4.7E-70 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CF65_00420 bca53ffcf53440960d201b4c4641df6f 158 SUPERFAMILY SSF75217 2 152 5.1E-42 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases CF65_00420 bca53ffcf53440960d201b4c4641df6f 158 Pfam PF00588 SpoU rRNA Methylase family 2 142 2.7E-32 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CF65_01961 0825114aca47d57180d1708e19064784 582 SMART SM00382 368 555 2.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01961 0825114aca47d57180d1708e19064784 582 Gene3D G3DSA:1.20.1560.10 2 328 2.4E-78 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_01961 0825114aca47d57180d1708e19064784 582 SUPERFAMILY SSF90123 13 327 9.68E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_01961 0825114aca47d57180d1708e19064784 582 SUPERFAMILY SSF52540 332 580 2.72E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01961 0825114aca47d57180d1708e19064784 582 Pfam PF00664 ABC transporter transmembrane region 26 297 7.2E-61 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CF65_01961 0825114aca47d57180d1708e19064784 582 Pfam PF00005 ABC transporter 359 509 1.9E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01961 0825114aca47d57180d1708e19064784 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 11 581 9.8E-243 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CF65_01961 0825114aca47d57180d1708e19064784 582 Gene3D G3DSA:3.40.50.300 329 581 8.4E-99 T 14-10-2018 CF65_01961 0825114aca47d57180d1708e19064784 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02088 8760c8b2344cad0c61d4b22c0a6b6c62 244 Gene3D G3DSA:2.60.40.10 1 83 1.1E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold CF65_02088 8760c8b2344cad0c61d4b22c0a6b6c62 244 Gene3D G3DSA:3.20.20.80 84 244 3.8E-63 T 14-10-2018 CF65_02088 8760c8b2344cad0c61d4b22c0a6b6c62 244 SUPERFAMILY SSF51445 80 243 7.31E-55 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily CF65_02088 8760c8b2344cad0c61d4b22c0a6b6c62 244 Pfam PF00128 Alpha amylase, catalytic domain 133 242 1.2E-12 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CF65_02088 8760c8b2344cad0c61d4b22c0a6b6c62 244 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 3 46 3.9E-5 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CF65_02088 8760c8b2344cad0c61d4b22c0a6b6c62 244 SUPERFAMILY SSF81296 4 93 2.16E-16 T 14-10-2018 IPR014756 Immunoglobulin E-set CF65_00611 98837fe76dacafd661a0695764ceb37a 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 9 149 36.064 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CF65_00611 98837fe76dacafd661a0695764ceb37a 150 Gene3D G3DSA:3.10.129.10 3 150 2.0E-60 T 14-10-2018 CF65_00611 98837fe76dacafd661a0695764ceb37a 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 11 146 1.0E-58 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CF65_00611 98837fe76dacafd661a0695764ceb37a 150 Pfam PF07977 FabA-like domain 18 142 5.7E-37 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CF65_00611 98837fe76dacafd661a0695764ceb37a 150 SUPERFAMILY SSF54637 8 146 2.66E-49 T 14-10-2018 IPR029069 HotDog domain superfamily CF65_00609 f4b9866c0c4bdcdb9506bdfc31431841 191 SUPERFAMILY SSF111384 22 186 1.31E-29 T 14-10-2018 CF65_00609 f4b9866c0c4bdcdb9506bdfc31431841 191 Pfam PF03938 Outer membrane protein (OmpH-like) 10 185 1.0E-26 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 CF65_00609 f4b9866c0c4bdcdb9506bdfc31431841 191 SMART SM00935 11 187 3.1E-40 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 CF65_00609 f4b9866c0c4bdcdb9506bdfc31431841 191 PIRSF PIRSF002094 1 190 3.7E-49 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 CF65_00609 f4b9866c0c4bdcdb9506bdfc31431841 191 Gene3D G3DSA:3.30.910.20 14 191 3.3E-21 T 14-10-2018 IPR024930 Skp domain superfamily CF65_01938 2220b734f86c335bfa14f088a270064d 511 SUPERFAMILY SSF51735 137 305 1.15E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01938 2220b734f86c335bfa14f088a270064d 511 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 427 510 1.2E-35 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CF65_01938 2220b734f86c335bfa14f088a270064d 511 SMART SM01003 4 137 1.6E-73 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CF65_01938 2220b734f86c335bfa14f088a270064d 511 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.7E-50 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CF65_01938 2220b734f86c335bfa14f088a270064d 511 Gene3D G3DSA:3.40.50.720 137 318 4.6E-161 T 14-10-2018 CF65_01938 2220b734f86c335bfa14f088a270064d 511 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CF65_01938 2220b734f86c335bfa14f088a270064d 511 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 CF65_01938 2220b734f86c335bfa14f088a270064d 511 Gene3D G3DSA:3.40.50.720 3 365 4.6E-161 T 14-10-2018 CF65_01938 2220b734f86c335bfa14f088a270064d 511 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 3 511 6.4E-302 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CF65_01938 2220b734f86c335bfa14f088a270064d 511 SUPERFAMILY SSF52283 1 168 4.59E-56 T 14-10-2018 CF65_01938 2220b734f86c335bfa14f088a270064d 511 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 4.6E-75 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CF65_01938 2220b734f86c335bfa14f088a270064d 511 PIRSF PIRSF000203 1 510 4.5E-283 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CF65_01938 2220b734f86c335bfa14f088a270064d 511 SMART SM01002 146 311 4.8E-83 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CF65_01657 12e671ce7de142a2de315feecc235660 427 SUPERFAMILY SSF56935 24 427 9.16E-129 T 14-10-2018 CF65_01657 12e671ce7de142a2de315feecc235660 427 Pfam PF02264 LamB porin 26 427 2.4E-136 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 CF65_01657 12e671ce7de142a2de315feecc235660 427 Gene3D G3DSA:2.40.170.10 24 427 5.5E-150 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 CF65_01657 12e671ce7de142a2de315feecc235660 427 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 422 5.0E-158 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 CF65_00929 145f2d83131849bf55cf12538935f561 806 Gene3D G3DSA:3.40.50.670 701 805 1.5E-25 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_00929 145f2d83131849bf55cf12538935f561 806 SUPERFAMILY SSF56719 397 799 9.94E-86 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CF65_00929 145f2d83131849bf55cf12538935f561 806 Gene3D G3DSA:3.30.230.10 224 395 3.4E-75 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00929 145f2d83131849bf55cf12538935f561 806 ProSitePatterns PS00177 DNA topoisomerase II signature. 425 433 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_00929 145f2d83131849bf55cf12538935f561 806 Pfam PF00204 DNA gyrase B 224 393 3.7E-59 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_00929 145f2d83131849bf55cf12538935f561 806 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 9 806 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 Pfam PF01751 Toprim domain 422 534 1.4E-18 T 14-10-2018 IPR006171 TOPRIM domain CF65_00929 145f2d83131849bf55cf12538935f561 806 Gene3D G3DSA:3.30.565.10 6 223 6.8E-95 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00929 145f2d83131849bf55cf12538935f561 806 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 736 796 1.7E-29 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 Gene3D G3DSA:3.10.20.690 595 686 1.4E-27 T 14-10-2018 CF65_00929 145f2d83131849bf55cf12538935f561 806 Gene3D G3DSA:3.40.50.670 401 574 3.3E-74 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_00929 145f2d83131849bf55cf12538935f561 806 SMART SM00387 35 179 6.6E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00929 145f2d83131849bf55cf12538935f561 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 177 3.5E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00929 145f2d83131849bf55cf12538935f561 806 SUPERFAMILY SSF55874 9 221 7.07E-77 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00929 145f2d83131849bf55cf12538935f561 806 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 6 806 106.915 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 SMART SM00433 39 800 3.2E-278 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR01159 DNA gyrase subunit B signature 473 482 3.3E-78 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR01159 DNA gyrase subunit B signature 363 377 3.3E-78 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR01159 DNA gyrase subunit B signature 377 397 3.3E-78 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR01159 DNA gyrase subunit B signature 223 245 3.3E-78 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR01159 DNA gyrase subunit B signature 315 331 3.3E-78 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR01159 DNA gyrase subunit B signature 199 212 3.3E-78 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR01159 DNA gyrase subunit B signature 9 19 3.3E-78 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR01159 DNA gyrase subunit B signature 760 772 3.3E-78 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR01159 DNA gyrase subunit B signature 776 792 3.3E-78 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR01159 DNA gyrase subunit B signature 184 199 3.3E-78 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CF65_00929 145f2d83131849bf55cf12538935f561 806 SUPERFAMILY SSF54211 224 395 5.69E-62 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR00418 DNA topoisomerase II family signature 508 525 3.5E-72 T 14-10-2018 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR00418 DNA topoisomerase II family signature 39 54 3.5E-72 T 14-10-2018 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR00418 DNA topoisomerase II family signature 271 284 3.5E-72 T 14-10-2018 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR00418 DNA topoisomerase II family signature 528 540 3.5E-72 T 14-10-2018 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR00418 DNA topoisomerase II family signature 74 87 3.5E-72 T 14-10-2018 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR00418 DNA topoisomerase II family signature 490 506 3.5E-72 T 14-10-2018 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR00418 DNA topoisomerase II family signature 739 755 3.5E-72 T 14-10-2018 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR00418 DNA topoisomerase II family signature 117 131 3.5E-72 T 14-10-2018 CF65_00929 145f2d83131849bf55cf12538935f561 806 PRINTS PR00418 DNA topoisomerase II family signature 423 437 3.5E-72 T 14-10-2018 CF65_02654 d2f9f125e88209ebb07c1405f3fb8df4 215 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 4 154 2.5E-26 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 CF65_00190 b560c6c0e4d273124e20e9fd718e1562 255 Gene3D G3DSA:3.20.20.70 2 255 1.4E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_00190 b560c6c0e4d273124e20e9fd718e1562 255 SUPERFAMILY SSF51351 3 251 1.83E-90 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_00190 b560c6c0e4d273124e20e9fd718e1562 255 Pfam PF00121 Triosephosphate isomerase 6 247 6.7E-91 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_00190 b560c6c0e4d273124e20e9fd718e1562 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_00190 b560c6c0e4d273124e20e9fd718e1562 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 249 61.578 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_00190 b560c6c0e4d273124e20e9fd718e1562 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 240 1.9E-87 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 7.4E-27 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 7.4E-27 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 7.4E-27 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 7.4E-27 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 SUPERFAMILY SSF56655 1 259 1.07E-88 T 14-10-2018 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 Gene3D G3DSA:3.30.540.10 1 139 3.3E-53 T 14-10-2018 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 4.1E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 4.1E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 4.1E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 4.1E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 4.1E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 4.1E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 Pfam PF00459 Inositol monophosphatase family 2 254 1.6E-76 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CF65_00705 87bfa0cb3227e3f9c77c6edb655f684a 266 Gene3D G3DSA:3.40.190.80 142 266 3.0E-39 T 14-10-2018 CF65_01177 4d8844d16706cae643d2efc59143bcb4 414 Gene3D G3DSA:3.40.47.10 266 413 6.2E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_01177 4d8844d16706cae643d2efc59143bcb4 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 161 177 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site CF65_01177 4d8844d16706cae643d2efc59143bcb4 414 SMART SM00825 Beta-ketoacyl synthase 4 414 3.1E-9 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CF65_01177 4d8844d16706cae643d2efc59143bcb4 414 SUPERFAMILY SSF53901 1 257 5.97E-54 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_01177 4d8844d16706cae643d2efc59143bcb4 414 SUPERFAMILY SSF53901 220 412 9.19E-60 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_01177 4d8844d16706cae643d2efc59143bcb4 414 Gene3D G3DSA:3.40.47.10 1 260 3.7E-57 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_01177 4d8844d16706cae643d2efc59143bcb4 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 368 1.3E-29 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CF65_01177 4d8844d16706cae643d2efc59143bcb4 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 252 5.2E-45 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CF65_02777 dc6e297ad737e2767a90e8ecf6848189 383 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 365 1.3E-91 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CF65_02777 dc6e297ad737e2767a90e8ecf6848189 383 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 371 2.2E-174 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CF65_02777 dc6e297ad737e2767a90e8ecf6848189 383 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 372 4.4E-186 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CF65_02777 dc6e297ad737e2767a90e8ecf6848189 383 SUPERFAMILY SSF51713 1 368 3.4E-158 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CF65_02777 dc6e297ad737e2767a90e8ecf6848189 383 Gene3D G3DSA:3.20.20.105 1 371 1.0E-166 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CF65_02777 dc6e297ad737e2767a90e8ecf6848189 383 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 368 55.43 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CF65_00132 bfc1ddaa87020ec2fd8767ec6b027959 94 Gene3D G3DSA:2.40.30.70 1 93 8.4E-16 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily CF65_00132 bfc1ddaa87020ec2fd8767ec6b027959 94 Pfam PF01980 Uncharacterised protein family UPF0066 22 86 3.6E-13 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain CF65_00132 bfc1ddaa87020ec2fd8767ec6b027959 94 SUPERFAMILY SSF118196 4 84 1.83E-27 T 14-10-2018 IPR036413 YaeB-like superfamily CF65_01064 2c06dc1eb9326e1fc7b1bc844d532297 295 PIRSF PIRSF006487 139 255 2.9 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CF65_01064 2c06dc1eb9326e1fc7b1bc844d532297 295 PIRSF PIRSF006487 5 135 2.1E-8 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CF65_01064 2c06dc1eb9326e1fc7b1bc844d532297 295 SUPERFAMILY SSF103025 8 213 3.92E-50 T 14-10-2018 CF65_01064 2c06dc1eb9326e1fc7b1bc844d532297 295 SUPERFAMILY SSF101790 215 294 1.24E-21 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CF65_01064 2c06dc1eb9326e1fc7b1bc844d532297 295 Gene3D G3DSA:3.30.70.1400 20 105 1.2E-22 T 14-10-2018 CF65_01064 2c06dc1eb9326e1fc7b1bc844d532297 295 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 158 222 5.4E-23 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site CF65_01064 2c06dc1eb9326e1fc7b1bc844d532297 295 Gene3D G3DSA:2.40.30.160 167 288 7.5E-35 T 14-10-2018 CF65_01064 2c06dc1eb9326e1fc7b1bc844d532297 295 Pfam PF01571 Aminomethyltransferase folate-binding domain 17 111 5.7E-9 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 Gene3D G3DSA:3.40.190.10 189 273 9.9E-55 T 14-10-2018 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 SUPERFAMILY SSF55021 279 377 8.01E-26 T 14-10-2018 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 Gene3D G3DSA:3.40.190.10 109 282 9.9E-55 T 14-10-2018 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 260 282 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 Pfam PF00800 Prephenate dehydratase 106 285 3.0E-58 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 Gene3D G3DSA:3.30.70.260 290 377 7.0E-26 T 14-10-2018 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 Pfam PF01817 Chorismate mutase type II 9 89 1.1E-15 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 SUPERFAMILY SSF48600 4 92 7.88E-19 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 324 331 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 PIRSF PIRSF001500 1 379 3.7E-141 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 5 89 5.2E-37 T 14-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 Gene3D G3DSA:1.20.59.10 2 108 3.0E-30 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 SUPERFAMILY SSF53850 105 290 9.88E-55 T 14-10-2018 CF65_00825 0de0ce80377f54cc860a9c4dd060a5b2 386 SMART SM00830 9 91 1.3E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CF65_01166 99a7373c9b76e31b0710ec965bfe1dde 269 Gene3D G3DSA:3.30.540.10 4 157 4.8E-42 T 14-10-2018 CF65_01166 99a7373c9b76e31b0710ec965bfe1dde 269 SUPERFAMILY SSF56655 7 266 2.49E-73 T 14-10-2018 CF65_01166 99a7373c9b76e31b0710ec965bfe1dde 269 Pfam PF00459 Inositol monophosphatase family 13 249 1.7E-47 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_01166 99a7373c9b76e31b0710ec965bfe1dde 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site CF65_01166 99a7373c9b76e31b0710ec965bfe1dde 269 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 215 229 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CF65_01166 99a7373c9b76e31b0710ec965bfe1dde 269 Gene3D G3DSA:3.40.190.80 158 263 1.1E-20 T 14-10-2018 CF65_01166 99a7373c9b76e31b0710ec965bfe1dde 269 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 8 255 3.7E-113 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 CF65_01166 99a7373c9b76e31b0710ec965bfe1dde 269 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 8 257 35.552 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 CF65_02461 eb71b5e87895ecd166229db202b9a6f1 354 Pfam PF00762 Ferrochelatase 6 319 8.1E-107 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CF65_02461 eb71b5e87895ecd166229db202b9a6f1 354 SUPERFAMILY SSF53800 5 335 7.96E-99 T 14-10-2018 CF65_02461 eb71b5e87895ecd166229db202b9a6f1 354 Gene3D G3DSA:3.40.50.1400 6 320 1.6E-93 T 14-10-2018 CF65_02461 eb71b5e87895ecd166229db202b9a6f1 354 ProSitePatterns PS00534 Ferrochelatase signature. 191 209 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CF65_02461 eb71b5e87895ecd166229db202b9a6f1 354 TIGRFAM TIGR00109 hemH: ferrochelatase 3 320 3.4E-118 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CF65_02461 eb71b5e87895ecd166229db202b9a6f1 354 Gene3D G3DSA:3.40.50.1400 168 303 1.6E-93 T 14-10-2018 CF65_02461 eb71b5e87895ecd166229db202b9a6f1 354 Hamap MF_00323 Ferrochelatase [hemH]. 5 322 36.888 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CF65_02239 c96125cf3a6e5ae491b49d8dedb1a427 82 Gene3D G3DSA:3.10.20.30 1 82 2.7E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily CF65_02239 c96125cf3a6e5ae491b49d8dedb1a427 82 SUPERFAMILY SSF54285 1 82 1.2E-19 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CF65_02239 c96125cf3a6e5ae491b49d8dedb1a427 82 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 82 5.5E-21 T 14-10-2018 CF65_02239 c96125cf3a6e5ae491b49d8dedb1a427 82 Pfam PF02597 ThiS family 4 82 9.4E-19 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CF65_00146 1ee7b3ef6b9c3a70a2a1ed2cf5e304ec 203 Gene3D G3DSA:1.20.5.100 4 34 4.9E-16 T 14-10-2018 CF65_00146 1ee7b3ef6b9c3a70a2a1ed2cf5e304ec 203 SMART SM00984 114 201 5.3E-12 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CF65_00146 1ee7b3ef6b9c3a70a2a1ed2cf5e304ec 203 Gene3D G3DSA:3.40.50.720 36 202 1.6E-63 T 14-10-2018 CF65_00146 1ee7b3ef6b9c3a70a2a1ed2cf5e304ec 203 SUPERFAMILY SSF52413 97 200 2.62E-25 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CF65_00146 1ee7b3ef6b9c3a70a2a1ed2cf5e304ec 203 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 115 189 9.1E-9 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CF65_00146 1ee7b3ef6b9c3a70a2a1ed2cf5e304ec 203 SUPERFAMILY SSF48179 6 101 8.5E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CF65_00146 1ee7b3ef6b9c3a70a2a1ed2cf5e304ec 203 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 6 95 1.1E-26 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CF65_01607 bd0596faecf4466b0743a64327025bc2 463 Gene3D G3DSA:3.90.76.10 31 152 1.7E-96 T 14-10-2018 CF65_01607 bd0596faecf4466b0743a64327025bc2 463 Gene3D G3DSA:3.10.105.10 228 432 1.7E-96 T 14-10-2018 CF65_01607 bd0596faecf4466b0743a64327025bc2 463 Gene3D G3DSA:3.40.190.10 12 444 1.7E-96 T 14-10-2018 CF65_01607 bd0596faecf4466b0743a64327025bc2 463 SUPERFAMILY SSF53850 12 454 4.89E-85 T 14-10-2018 CF65_01607 bd0596faecf4466b0743a64327025bc2 463 PIRSF PIRSF002741 2 462 3.1E-74 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CF65_01607 bd0596faecf4466b0743a64327025bc2 463 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 42 382 2.1E-40 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain CF65_00880 0a027da6d18d23063165d58727dce8ea 523 SUPERFAMILY SSF53300 212 436 8.9E-12 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily CF65_00880 0a027da6d18d23063165d58727dce8ea 523 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 24 66 1.1E-6 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal CF65_02677 35a0e0f97fbb976e2dac9f5a6e4ca591 308 Pfam PF13247 4Fe-4S dicluster domain 96 192 1.6E-25 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02677 35a0e0f97fbb976e2dac9f5a6e4ca591 308 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 137 148 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02677 35a0e0f97fbb976e2dac9f5a6e4ca591 308 Pfam PF09163 Formate dehydrogenase N, transmembrane 250 292 1.8E-17 T 14-10-2018 IPR015246 Formate dehydrogenase, transmembrane CF65_02677 35a0e0f97fbb976e2dac9f5a6e4ca591 308 PIRSF PIRSF036298 4 307 3.6E-160 T 14-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 CF65_02677 35a0e0f97fbb976e2dac9f5a6e4ca591 308 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 10 294 4.0E-160 T 14-10-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 CF65_02677 35a0e0f97fbb976e2dac9f5a6e4ca591 308 Gene3D G3DSA:1.20.5.480 251 297 5.6E-12 T 14-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily CF65_02677 35a0e0f97fbb976e2dac9f5a6e4ca591 308 Gene3D G3DSA:3.30.70.20 31 231 1.7E-98 T 14-10-2018 CF65_02677 35a0e0f97fbb976e2dac9f5a6e4ca591 308 SUPERFAMILY SSF54862 30 277 2.62E-69 T 14-10-2018 CF65_02677 35a0e0f97fbb976e2dac9f5a6e4ca591 308 Gene3D G3DSA:3.30.70.20 21 166 1.7E-98 T 14-10-2018 CF65_02637 f100e5731cdf0ed27efc52385211e76a 446 Pfam PF09913 Predicted membrane protein (DUF2142) 18 398 8.1E-53 T 14-10-2018 IPR018674 Protein of unknown function DUF2142, membrane CF65_01087 95e74114ff3b0711f2eb0f21ac542fe1 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 216 340 9.4E-28 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_01087 95e74114ff3b0711f2eb0f21ac542fe1 344 SUPERFAMILY SSF52540 1 211 1.71E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01087 95e74114ff3b0711f2eb0f21ac542fe1 344 Gene3D G3DSA:1.10.8.60 146 215 1.4E-22 T 14-10-2018 CF65_01087 95e74114ff3b0711f2eb0f21ac542fe1 344 Gene3D G3DSA:3.40.50.300 1 142 3.5E-35 T 14-10-2018 CF65_01087 95e74114ff3b0711f2eb0f21ac542fe1 344 Pfam PF06144 DNA polymerase III, delta subunit 21 192 8.0E-42 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CF65_01087 95e74114ff3b0711f2eb0f21ac542fe1 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 343 1.1E-95 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CF65_01087 95e74114ff3b0711f2eb0f21ac542fe1 344 SUPERFAMILY SSF48019 214 343 6.97E-27 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CF65_01087 95e74114ff3b0711f2eb0f21ac542fe1 344 Gene3D G3DSA:1.20.272.10 216 344 3.8E-39 T 14-10-2018 CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 6 240 9.4E-101 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 SUPERFAMILY SSF51735 2 241 6.46E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 3.2E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.2E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 3.2E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 3.2E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 3.2E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.2E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 185 1.9E-4 T 14-10-2018 CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 Gene3D G3DSA:3.40.50.720 1 242 1.1E-86 T 14-10-2018 CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 239 1.2E-66 T 14-10-2018 CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 7.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 7.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 7.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00269 eca47ff7080ee310f78f256ea09146f1 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CF65_02465 39b6cbc5860e53bfd42b5d8f6f418018 267 Gene3D G3DSA:3.40.50.1360 1 267 1.9E-114 T 14-10-2018 CF65_02465 39b6cbc5860e53bfd42b5d8f6f418018 267 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 CF65_02465 39b6cbc5860e53bfd42b5d8f6f418018 267 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.832 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 CF65_02465 39b6cbc5860e53bfd42b5d8f6f418018 267 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 8 222 3.3E-21 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CF65_02465 39b6cbc5860e53bfd42b5d8f6f418018 267 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 4.2E-141 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 CF65_02465 39b6cbc5860e53bfd42b5d8f6f418018 267 SUPERFAMILY SSF100950 1 261 5.44E-103 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 SUPERFAMILY SSF53335 408 710 1.06E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 Gene3D G3DSA:3.30.750.80 405 496 2.1E-34 T 14-10-2018 CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 14-10-2018 IPR000241 Putative RNA methylase domain CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 Gene3D G3DSA:3.40.50.150 497 715 4.4E-75 T 14-10-2018 CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 Gene3D G3DSA:3.30.2130.30 5 256 1.9E-136 T 14-10-2018 CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 Gene3D G3DSA:3.40.50.150 169 372 1.9E-136 T 14-10-2018 CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 PIRSF PIRSF037618 1 715 4.0E-304 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 452 679 5.6E-22 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 3.4E-68 T 14-10-2018 IPR000241 Putative RNA methylase domain CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 715 32.007 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 SMART SM00981 56 154 3.4E-19 T 14-10-2018 IPR004114 THUMP domain GO:0003723 CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 SUPERFAMILY SSF53335 142 373 5.51E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00809 7679a59d0c64b5eaa0a13af01500af89 715 Pfam PF02926 THUMP domain 24 153 2.2E-16 T 14-10-2018 IPR004114 THUMP domain GO:0003723 CF65_00995 d6435a99d54f8469df917821348f1844 414 SMART SM00388 192 254 2.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CF65_00995 d6435a99d54f8469df917821348f1844 414 SUPERFAMILY SSF47384 177 252 6.47E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CF65_00995 d6435a99d54f8469df917821348f1844 414 Pfam PF00672 HAMP domain 137 187 1.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CF65_00995 d6435a99d54f8469df917821348f1844 414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 351 1.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CF65_00995 d6435a99d54f8469df917821348f1844 414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 390 1.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CF65_00995 d6435a99d54f8469df917821348f1844 414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 365 1.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CF65_00995 d6435a99d54f8469df917821348f1844 414 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 306 410 9.2E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00995 d6435a99d54f8469df917821348f1844 414 Gene3D G3DSA:1.10.287.130 141 255 4.1E-30 T 14-10-2018 CF65_00995 d6435a99d54f8469df917821348f1844 414 SUPERFAMILY SSF55874 244 411 1.11E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00995 d6435a99d54f8469df917821348f1844 414 SMART SM00304 137 191 2.8E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CF65_00995 d6435a99d54f8469df917821348f1844 414 SMART SM00387 302 412 4.5E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CF65_00995 d6435a99d54f8469df917821348f1844 414 Gene3D G3DSA:3.30.565.10 259 411 1.9E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CF65_00995 d6435a99d54f8469df917821348f1844 414 Pfam PF00512 His Kinase A (phospho-acceptor) domain 194 252 1.9E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 SUPERFAMILY SSF53067 3 123 7.77E-33 T 14-10-2018 CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 336 66.18 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 Pfam PF00814 Glycoprotease family 24 312 1.6E-104 T 14-10-2018 IPR000905 Gcp-like domain CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 311 2.5E-128 T 14-10-2018 IPR017861 Kae1/TsaD family CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 SUPERFAMILY SSF53067 101 313 3.67E-45 T 14-10-2018 CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 Gene3D G3DSA:3.30.420.40 3 320 6.1E-132 T 14-10-2018 CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 318 8.8E-137 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 Gene3D G3DSA:3.30.420.40 129 298 6.1E-132 T 14-10-2018 CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.5E-54 T 14-10-2018 IPR017861 Kae1/TsaD family CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 268 277 1.5E-54 T 14-10-2018 IPR017861 Kae1/TsaD family CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.5E-54 T 14-10-2018 IPR017861 Kae1/TsaD family CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.5E-54 T 14-10-2018 IPR017861 Kae1/TsaD family CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.5E-54 T 14-10-2018 IPR017861 Kae1/TsaD family CF65_02402 c60b4249b4870b6f8297ef89156eff4d 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.5E-54 T 14-10-2018 IPR017861 Kae1/TsaD family CF65_02154 d393e44b2d65404e05fdad2191c38f2c 333 Pfam PF01497 Periplasmic binding protein 89 273 2.7E-16 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain CF65_02154 d393e44b2d65404e05fdad2191c38f2c 333 Gene3D G3DSA:3.40.50.1980 179 279 6.0E-46 T 14-10-2018 CF65_02154 d393e44b2d65404e05fdad2191c38f2c 333 Gene3D G3DSA:3.40.50.1980 30 153 2.2E-18 T 14-10-2018 CF65_02154 d393e44b2d65404e05fdad2191c38f2c 333 Gene3D G3DSA:1.20.58.2180 166 324 6.0E-46 T 14-10-2018 CF65_02154 d393e44b2d65404e05fdad2191c38f2c 333 SUPERFAMILY SSF53807 35 331 2.67E-39 T 14-10-2018 CF65_00361 f16a49f482255bfe45359a92257e856f 136 SUPERFAMILY SSF54686 3 133 8.11E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 CF65_00361 f16a49f482255bfe45359a92257e856f 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00361 f16a49f482255bfe45359a92257e856f 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 4.2E-47 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CF65_00361 f16a49f482255bfe45359a92257e856f 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.996 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00361 f16a49f482255bfe45359a92257e856f 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 5.1E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00361 f16a49f482255bfe45359a92257e856f 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 5.1E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00361 f16a49f482255bfe45359a92257e856f 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 5.1E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00361 f16a49f482255bfe45359a92257e856f 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 5.1E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00361 f16a49f482255bfe45359a92257e856f 136 Gene3D G3DSA:3.90.1170.10 1 136 2.3E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 CF65_00361 f16a49f482255bfe45359a92257e856f 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00361 f16a49f482255bfe45359a92257e856f 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.6E-58 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00890 abdb74b217c6b4dfae4445cbbd93b8dc 300 Pfam PF11738 Protein of unknown function (DUF3298) 207 277 2.4E-8 T 14-10-2018 IPR021729 Domain of unknown function DUF3298 CF65_00890 abdb74b217c6b4dfae4445cbbd93b8dc 300 Gene3D G3DSA:3.90.640.20 204 293 7.4E-19 T 14-10-2018 IPR037126 PdaC/RsiV-like superfamily CF65_00890 abdb74b217c6b4dfae4445cbbd93b8dc 300 Gene3D G3DSA:3.30.565.40 71 203 3.1E-17 T 14-10-2018 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 PRINTS PR00981 Seryl-tRNA synthetase signature 286 299 1.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 PRINTS PR00981 Seryl-tRNA synthetase signature 326 339 1.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 PRINTS PR00981 Seryl-tRNA synthetase signature 274 286 1.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 PRINTS PR00981 Seryl-tRNA synthetase signature 361 377 1.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 PRINTS PR00981 Seryl-tRNA synthetase signature 343 359 1.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 432 41.009 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 SUPERFAMILY SSF46589 1 113 8.37E-28 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 Gene3D G3DSA:3.30.930.10 106 437 3.9E-115 T 14-10-2018 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 PIRSF PIRSF001529 1 436 4.3E-183 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 232 410 1.3E-35 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 427 6.4E-180 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 SUPERFAMILY SSF55681 117 428 6.08E-99 T 14-10-2018 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 Gene3D G3DSA:1.10.287.40 1 105 4.9E-19 T 14-10-2018 CF65_02724 ce115a95168ce9969b7d4715fa1e0e5b 438 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 7.4E-31 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CF65_00064 07736ae9c92c8955e940143494f98d51 260 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 93 250 3.7E-53 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CF65_00064 07736ae9c92c8955e940143494f98d51 260 Pfam PF00849 RNA pseudouridylate synthase 88 219 3.4E-16 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_00064 07736ae9c92c8955e940143494f98d51 260 Gene3D G3DSA:3.30.70.1560 155 236 4.4E-60 T 14-10-2018 CF65_00064 07736ae9c92c8955e940143494f98d51 260 Gene3D G3DSA:3.30.70.580 89 254 4.4E-60 T 14-10-2018 CF65_00064 07736ae9c92c8955e940143494f98d51 260 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 126 140 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CF65_00064 07736ae9c92c8955e940143494f98d51 260 Pfam PF01479 S4 domain 28 74 1.3E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00064 07736ae9c92c8955e940143494f98d51 260 SUPERFAMILY SSF55174 28 108 8.24E-15 T 14-10-2018 CF65_00064 07736ae9c92c8955e940143494f98d51 260 SUPERFAMILY SSF55120 88 254 2.88E-45 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_00064 07736ae9c92c8955e940143494f98d51 260 SMART SM00363 28 88 3.1E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00064 07736ae9c92c8955e940143494f98d51 260 Gene3D G3DSA:3.10.290.10 27 84 1.5E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CF65_02062 fd057211eee486d2084062a2a24c1b72 302 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 130 294 1.0E-61 T 14-10-2018 IPR005642 Lysine exporter LysO CF65_02062 fd057211eee486d2084062a2a24c1b72 302 Pfam PF03956 Lysine exporter LysO 113 297 1.4E-52 T 14-10-2018 IPR005642 Lysine exporter LysO CF65_00404 6fe01ccd83005ea6c3b2460b9403de47 144 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 1 114 28.711 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B CF65_00404 6fe01ccd83005ea6c3b2460b9403de47 144 SUPERFAMILY SSF89946 4 121 5.75E-37 T 14-10-2018 IPR036701 RraB-like superfamily CF65_00404 6fe01ccd83005ea6c3b2460b9403de47 144 PIRSF PIRSF018193 1 142 4.6E-63 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B CF65_00404 6fe01ccd83005ea6c3b2460b9403de47 144 Pfam PF06877 Regulator of ribonuclease activity B 9 110 5.9E-30 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain CF65_00404 6fe01ccd83005ea6c3b2460b9403de47 144 Gene3D G3DSA:3.30.70.970 1 122 1.1E-45 T 14-10-2018 IPR036701 RraB-like superfamily CF65_00044 1194130e02145006307d570e46e6b9cd 225 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 3 224 5.2E-132 T 14-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein CF65_00044 1194130e02145006307d570e46e6b9cd 225 SUPERFAMILY SSF54862 36 220 1.78E-63 T 14-10-2018 CF65_00044 1194130e02145006307d570e46e6b9cd 225 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 127 138 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_00044 1194130e02145006307d570e46e6b9cd 225 Pfam PF12798 4Fe-4S binding domain 48 59 0.16 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00044 1194130e02145006307d570e46e6b9cd 225 Gene3D G3DSA:3.30.70.20 73 224 1.4E-52 T 14-10-2018 CF65_00044 1194130e02145006307d570e46e6b9cd 225 Gene3D G3DSA:3.30.70.20 23 72 2.5E-5 T 14-10-2018 CF65_00044 1194130e02145006307d570e46e6b9cd 225 Pfam PF13247 4Fe-4S dicluster domain 86 183 3.0E-23 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02897 891cc257d59cbbe865a3663989792722 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 310 4.5E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_02897 891cc257d59cbbe865a3663989792722 312 SUPERFAMILY SSF161098 110 292 2.62E-24 T 14-10-2018 IPR035906 MetI-like superfamily CF65_02897 891cc257d59cbbe865a3663989792722 312 Gene3D G3DSA:1.10.3720.10 110 308 5.8E-18 T 14-10-2018 IPR035906 MetI-like superfamily CF65_02897 891cc257d59cbbe865a3663989792722 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 34 80 4.3E-14 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CF65_02390 bfc0961311a808ac7240f44987712a9d 394 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 394 7.9E-228 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CF65_02390 bfc0961311a808ac7240f44987712a9d 394 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 394 219.874 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CF65_02390 bfc0961311a808ac7240f44987712a9d 394 Gene3D G3DSA:3.20.20.150 1 391 3.2E-146 T 14-10-2018 CF65_02390 bfc0961311a808ac7240f44987712a9d 394 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 389 9.7E-164 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CF65_02390 bfc0961311a808ac7240f44987712a9d 394 PIRSF PIRSF016049 1 394 8.7E-176 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CF65_02390 bfc0961311a808ac7240f44987712a9d 394 SUPERFAMILY SSF51658 1 383 2.35E-78 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily CF65_02686 a71d363f63da301a7c912cb5cf98d7ff 320 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 50 65 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02686 a71d363f63da301a7c912cb5cf98d7ff 320 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 206 219 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02686 a71d363f63da301a7c912cb5cf98d7ff 320 Pfam PF00146 NADH dehydrogenase 19 304 2.9E-52 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 Gene3D G3DSA:3.40.50.300 557 853 2.1E-103 T 14-10-2018 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 PIRSF PIRSF037677 1 851 2.8E-156 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 Gene3D G3DSA:3.40.1170.10 1 111 2.5E-47 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 677 693 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 SUPERFAMILY SSF48334 257 555 1.14E-88 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 Gene3D G3DSA:1.10.1420.10 256 548 1.8E-104 T 14-10-2018 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 Gene3D G3DSA:1.10.1420.10 376 492 1.8E-104 T 14-10-2018 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 Pfam PF01624 MutS domain I 1 109 3.5E-39 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 Pfam PF00488 MutS domain V 599 786 1.5E-86 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 SMART SM00534 596 783 6.3E-118 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 SMART SM00533 273 580 6.4E-110 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 Pfam PF05190 MutS family domain IV 417 506 6.5E-29 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 Gene3D G3DSA:3.30.420.110 117 251 4.5E-37 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 SUPERFAMILY SSF53150 104 256 4.32E-42 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 SUPERFAMILY SSF55271 1 105 5.89E-39 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 Pfam PF05192 MutS domain III 259 548 8.2E-42 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 849 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 Pfam PF05188 MutS domain II 118 243 1.8E-32 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 843 24.572 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CF65_00317 2b7e85030e87ee2da8dc59cd3246aad8 853 SUPERFAMILY SSF52540 556 787 9.86E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00602 ce0b7280018cdacb0db11a989762691d 365 SUPERFAMILY SSF55347 93 241 7.19E-62 T 14-10-2018 CF65_00602 ce0b7280018cdacb0db11a989762691d 365 PIRSF PIRSF006205 1 364 5.0E-137 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CF65_00602 ce0b7280018cdacb0db11a989762691d 365 Gene3D G3DSA:3.40.50.720 1 117 8.4E-36 T 14-10-2018 CF65_00602 ce0b7280018cdacb0db11a989762691d 365 Gene3D G3DSA:1.10.1740.10 279 364 3.2E-31 T 14-10-2018 CF65_00602 ce0b7280018cdacb0db11a989762691d 365 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 113 206 2.8E-35 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CF65_00602 ce0b7280018cdacb0db11a989762691d 365 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 99 1.1E-29 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CF65_00602 ce0b7280018cdacb0db11a989762691d 365 SUPERFAMILY SSF69055 269 360 1.44E-31 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CF65_00602 ce0b7280018cdacb0db11a989762691d 365 Pfam PF13288 DXP reductoisomerase C-terminal domain 238 354 1.3E-41 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CF65_00602 ce0b7280018cdacb0db11a989762691d 365 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 359 39.25 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CF65_00602 ce0b7280018cdacb0db11a989762691d 365 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 361 8.6E-165 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CF65_00602 ce0b7280018cdacb0db11a989762691d 365 SUPERFAMILY SSF51735 2 117 2.42E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02270 c9196f0ef37ebd1f112e77d921f4337b 573 Pfam PF13654 AAA domain 108 294 9.0E-17 T 14-10-2018 CF65_02270 c9196f0ef37ebd1f112e77d921f4337b 573 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 417 524 2.1E-5 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CF65_02270 c9196f0ef37ebd1f112e77d921f4337b 573 SUPERFAMILY SSF54211 330 524 2.5E-28 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02270 c9196f0ef37ebd1f112e77d921f4337b 573 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 331 347 8.9E-6 T 14-10-2018 CF65_02270 c9196f0ef37ebd1f112e77d921f4337b 573 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 414 433 8.9E-6 T 14-10-2018 CF65_02270 c9196f0ef37ebd1f112e77d921f4337b 573 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 444 463 8.9E-6 T 14-10-2018 CF65_02270 c9196f0ef37ebd1f112e77d921f4337b 573 Gene3D G3DSA:3.40.50.300 24 208 2.8E-11 T 14-10-2018 CF65_02270 c9196f0ef37ebd1f112e77d921f4337b 573 Gene3D G3DSA:3.30.230.10 308 543 3.1E-81 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00258 62958184633482cad69b77749b411d03 653 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 27 622 9.9E-240 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_00258 62958184633482cad69b77749b411d03 653 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 11 625 51.809 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_00258 62958184633482cad69b77749b411d03 653 Gene3D G3DSA:3.30.1390.30 93 168 5.7E-46 T 14-10-2018 CF65_00258 62958184633482cad69b77749b411d03 653 SUPERFAMILY SSF56519 65 261 1.57E-48 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CF65_00258 62958184633482cad69b77749b411d03 653 Gene3D G3DSA:3.90.1310.10 72 256 5.7E-46 T 14-10-2018 CF65_00258 62958184633482cad69b77749b411d03 653 SUPERFAMILY SSF56601 262 623 7.27E-101 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CF65_00258 62958184633482cad69b77749b411d03 653 Pfam PF00905 Penicillin binding protein transpeptidase domain 279 618 1.1E-88 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CF65_00258 62958184633482cad69b77749b411d03 653 Gene3D G3DSA:3.40.710.10 257 633 5.3E-104 T 14-10-2018 CF65_00258 62958184633482cad69b77749b411d03 653 Pfam PF03717 Penicillin-binding Protein dimerisation domain 72 247 6.1E-43 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CF65_00236 f991b2a3bf572fa0b635d107542d73fa 708 ProSitePatterns PS00850 Glycine radical domain signature. 678 686 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CF65_00236 f991b2a3bf572fa0b635d107542d73fa 708 SUPERFAMILY SSF51998 124 689 2.35E-195 T 14-10-2018 CF65_00236 f991b2a3bf572fa0b635d107542d73fa 708 Gene3D G3DSA:3.20.70.20 124 689 3.6E-232 T 14-10-2018 CF65_00236 f991b2a3bf572fa0b635d107542d73fa 708 Pfam PF03477 ATP cone domain 5 92 5.2E-23 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CF65_00236 f991b2a3bf572fa0b635d107542d73fa 708 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 119 707 3.6E-180 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CF65_00236 f991b2a3bf572fa0b635d107542d73fa 708 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 118 707 2.4E-198 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CF65_00939 9825d961f8d29a0773dad889ee07081c 771 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.4E-28 T 14-10-2018 CF65_00939 9825d961f8d29a0773dad889ee07081c 771 SUPERFAMILY SSF158832 3 322 1.96E-119 T 14-10-2018 CF65_00939 9825d961f8d29a0773dad889ee07081c 771 Pfam PF00575 S1 RNA binding domain 649 720 9.7E-25 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_00939 9825d961f8d29a0773dad889ee07081c 771 SMART SM00316 649 720 1.2E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_00939 9825d961f8d29a0773dad889ee07081c 771 Gene3D G3DSA:2.40.50.140 631 723 1.8E-29 T 14-10-2018 CF65_00939 9825d961f8d29a0773dad889ee07081c 771 SUPERFAMILY SSF47781 470 556 2.33E-28 T 14-10-2018 IPR010994 RuvA domain 2-like CF65_00939 9825d961f8d29a0773dad889ee07081c 771 SUPERFAMILY SSF50249 637 721 7.38E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_00939 9825d961f8d29a0773dad889ee07081c 771 SUPERFAMILY SSF53098 323 469 1.63E-48 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_00939 9825d961f8d29a0773dad889ee07081c 771 Pfam PF16921 Tex protein YqgF-like domain 327 451 5.5E-52 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain CF65_00939 9825d961f8d29a0773dad889ee07081c 771 Gene3D G3DSA:3.30.420.140 326 451 1.2E-154 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 CF65_00939 9825d961f8d29a0773dad889ee07081c 771 Pfam PF09371 Tex-like protein N-terminal domain 10 194 1.1E-68 T 14-10-2018 IPR018974 Tex-like protein, N-terminal CF65_00939 9825d961f8d29a0773dad889ee07081c 771 Gene3D G3DSA:1.10.3500.10 113 498 1.2E-154 T 14-10-2018 IPR023323 Tex-like domain superfamily CF65_00939 9825d961f8d29a0773dad889ee07081c 771 Gene3D G3DSA:1.10.10.650 1 110 2.9E-40 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily CF65_00939 9825d961f8d29a0773dad889ee07081c 771 SUPERFAMILY SSF47781 560 632 1.6E-20 T 14-10-2018 IPR010994 RuvA domain 2-like CF65_00939 9825d961f8d29a0773dad889ee07081c 771 SMART SM00732 327 424 1.9E-33 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CF65_00939 9825d961f8d29a0773dad889ee07081c 771 Gene3D G3DSA:1.10.150.310 499 630 1.8E-51 T 14-10-2018 CF65_02805 fc11eb2ac24e91b023d54dbad4c45dbf 707 Pfam PF00664 ABC transporter transmembrane region 157 424 5.6E-59 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CF65_02805 fc11eb2ac24e91b023d54dbad4c45dbf 707 Gene3D G3DSA:3.40.50.300 463 707 9.0E-94 T 14-10-2018 CF65_02805 fc11eb2ac24e91b023d54dbad4c45dbf 707 ProSitePatterns PS00211 ABC transporters family signature. 606 620 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02805 fc11eb2ac24e91b023d54dbad4c45dbf 707 SMART SM00382 494 680 3.7E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02805 fc11eb2ac24e91b023d54dbad4c45dbf 707 SUPERFAMILY SSF90123 142 453 4.45E-66 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_02805 fc11eb2ac24e91b023d54dbad4c45dbf 707 Pfam PF00005 ABC transporter 485 634 2.6E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02805 fc11eb2ac24e91b023d54dbad4c45dbf 707 Pfam PF03412 Peptidase C39 family 4 129 2.8E-24 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CF65_02805 fc11eb2ac24e91b023d54dbad4c45dbf 707 SUPERFAMILY SSF52540 459 705 2.0E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02805 fc11eb2ac24e91b023d54dbad4c45dbf 707 Gene3D G3DSA:1.20.1560.10 141 455 3.9E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_02805 fc11eb2ac24e91b023d54dbad4c45dbf 707 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 11 706 0.0 T 14-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 CF65_02805 fc11eb2ac24e91b023d54dbad4c45dbf 707 Gene3D G3DSA:3.90.70.10 9 137 1.5E-26 T 14-10-2018 CF65_00168 5b25a6079c59ddf505c507c82061c09a 107 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 3.8E-20 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CF65_00168 5b25a6079c59ddf505c507c82061c09a 107 SUPERFAMILY SSF69754 1 100 1.23E-29 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like CF65_00168 5b25a6079c59ddf505c507c82061c09a 107 Gene3D G3DSA:3.30.160.100 1 107 1.8E-38 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like CF65_00168 5b25a6079c59ddf505c507c82061c09a 107 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 8.3E-33 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CF65_01323 17665d20355b7d9088c1c338b3217e6f 78 Pfam PF00830 Ribosomal L28 family 3 62 3.1E-25 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01323 17665d20355b7d9088c1c338b3217e6f 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.118 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01323 17665d20355b7d9088c1c338b3217e6f 78 SUPERFAMILY SSF143800 2 77 4.91E-30 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01323 17665d20355b7d9088c1c338b3217e6f 78 Gene3D G3DSA:2.30.170.40 2 78 3.1E-33 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01323 17665d20355b7d9088c1c338b3217e6f 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 3.4E-27 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00912 78393957d3aa00d69d33b75ab06f7e5d 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 5.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00912 78393957d3aa00d69d33b75ab06f7e5d 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 5.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00912 78393957d3aa00d69d33b75ab06f7e5d 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 5.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00912 78393957d3aa00d69d33b75ab06f7e5d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 2.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00912 78393957d3aa00d69d33b75ab06f7e5d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00912 78393957d3aa00d69d33b75ab06f7e5d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00912 78393957d3aa00d69d33b75ab06f7e5d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 2.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00912 78393957d3aa00d69d33b75ab06f7e5d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 2.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00912 78393957d3aa00d69d33b75ab06f7e5d 251 SUPERFAMILY SSF51735 3 246 2.85E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_00912 78393957d3aa00d69d33b75ab06f7e5d 251 Pfam PF00106 short chain dehydrogenase 3 185 3.1E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_00912 78393957d3aa00d69d33b75ab06f7e5d 251 Gene3D G3DSA:3.40.50.720 1 251 1.3E-49 T 14-10-2018 CF65_00912 78393957d3aa00d69d33b75ab06f7e5d 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CF65_02260 280f1bee22f4795d194f70518c49a0d3 272 Pfam PF01416 tRNA pseudouridine synthase 19 113 1.6E-10 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02260 280f1bee22f4795d194f70518c49a0d3 272 Pfam PF01416 tRNA pseudouridine synthase 155 255 2.8E-27 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02260 280f1bee22f4795d194f70518c49a0d3 272 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 12 254 34.038 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02260 280f1bee22f4795d194f70518c49a0d3 272 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 13 249 3.9E-78 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02260 280f1bee22f4795d194f70518c49a0d3 272 SUPERFAMILY SSF55120 11 268 9.49E-91 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02260 280f1bee22f4795d194f70518c49a0d3 272 Gene3D G3DSA:3.30.70.580 9 115 3.1E-39 T 14-10-2018 CF65_02260 280f1bee22f4795d194f70518c49a0d3 272 Gene3D G3DSA:3.30.70.660 116 252 4.7E-46 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 CF65_02260 280f1bee22f4795d194f70518c49a0d3 272 PIRSF PIRSF001430 11 266 5.0E-74 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02425 f903388c5413269b04c29955b777b016 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 107.68 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CF65_02425 f903388c5413269b04c29955b777b016 427 Pfam PF00202 Aminotransferase class-III 32 396 9.1E-83 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CF65_02425 f903388c5413269b04c29955b777b016 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CF65_02425 f903388c5413269b04c29955b777b016 427 Gene3D G3DSA:3.90.1150.10 8 418 4.5E-185 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_02425 f903388c5413269b04c29955b777b016 427 Gene3D G3DSA:3.40.640.10 69 317 4.5E-185 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_02425 f903388c5413269b04c29955b777b016 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 423 3.0E-200 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CF65_02425 f903388c5413269b04c29955b777b016 427 SUPERFAMILY SSF53383 3 422 1.83E-140 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00460 bd7527b15cd8a665b9a647a857cec5df 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.8E-230 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CF65_00460 bd7527b15cd8a665b9a647a857cec5df 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 186 329 3.6E-41 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CF65_00460 bd7527b15cd8a665b9a647a857cec5df 443 Gene3D G3DSA:1.10.8.60 335 440 5.3E-41 T 14-10-2018 CF65_00460 bd7527b15cd8a665b9a647a857cec5df 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 3.9E-7 T 14-10-2018 IPR019489 Clp ATPase, C-terminal CF65_00460 bd7527b15cd8a665b9a647a857cec5df 443 SUPERFAMILY SSF52540 3 441 2.42E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00460 bd7527b15cd8a665b9a647a857cec5df 443 SMART SM01086 335 429 1.2E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal CF65_00460 bd7527b15cd8a665b9a647a857cec5df 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.045 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CF65_00460 bd7527b15cd8a665b9a647a857cec5df 443 SMART SM00382 49 332 6.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00460 bd7527b15cd8a665b9a647a857cec5df 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 141 1.0E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CF65_00980 211932202c8b5a3327d57acac51ec760 120 Gene3D G3DSA:3.40.50.1820 11 120 9.4E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_01954 abb399163191054d341a8bf882874dc7 589 Gene3D G3DSA:3.40.1440.10 1 80 5.1E-26 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CF65_01954 abb399163191054d341a8bf882874dc7 589 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 586 26.903 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 CF65_01954 abb399163191054d341a8bf882874dc7 589 SMART SM00278 535 554 47.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CF65_01954 abb399163191054d341a8bf882874dc7 589 SMART SM00278 567 586 0.26 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CF65_01954 abb399163191054d341a8bf882874dc7 589 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 1 568 3.6E-221 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 CF65_01954 abb399163191054d341a8bf882874dc7 589 Gene3D G3DSA:4.10.860.10 179 221 5.2E-6 T 14-10-2018 CF65_01954 abb399163191054d341a8bf882874dc7 589 SMART SM00465 1 76 1.9E-16 T 14-10-2018 IPR000305 GIY-YIG endonuclease CF65_01954 abb399163191054d341a8bf882874dc7 589 Pfam PF14520 Helix-hairpin-helix domain 537 588 1.3E-7 T 14-10-2018 CF65_01954 abb399163191054d341a8bf882874dc7 589 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 364 521 1.0E-44 T 14-10-2018 IPR001162 UvrC family homology region CF65_01954 abb399163191054d341a8bf882874dc7 589 SUPERFAMILY SSF47781 499 588 1.4E-18 T 14-10-2018 IPR010994 RuvA domain 2-like CF65_01954 abb399163191054d341a8bf882874dc7 589 Gene3D G3DSA:1.10.150.20 534 589 4.6E-23 T 14-10-2018 CF65_01954 abb399163191054d341a8bf882874dc7 589 Gene3D G3DSA:3.30.420.340 356 531 1.7E-45 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily CF65_01954 abb399163191054d341a8bf882874dc7 589 Pfam PF01541 GIY-YIG catalytic domain 4 71 2.3E-9 T 14-10-2018 IPR000305 GIY-YIG endonuclease CF65_01954 abb399163191054d341a8bf882874dc7 589 SUPERFAMILY SSF82771 1 78 8.11E-20 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CF65_01954 abb399163191054d341a8bf882874dc7 589 Pfam PF02151 UvrB/uvrC motif 183 216 1.2E-10 T 14-10-2018 IPR001943 UVR domain GO:0005515 CF65_01954 abb399163191054d341a8bf882874dc7 589 SUPERFAMILY SSF46600 169 221 6.8E-14 T 14-10-2018 IPR036876 UVR domain superfamily CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 PRINTS PR00142 RecA protein signature 140 169 7.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 PRINTS PR00142 RecA protein signature 68 97 7.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 PRINTS PR00142 RecA protein signature 272 289 7.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 PRINTS PR00142 RecA protein signature 102 131 7.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 PRINTS PR00142 RecA protein signature 218 247 7.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 PRINTS PR00142 RecA protein signature 185 213 7.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 SMART SM00382 32 203 2.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 1 298 5.9E-160 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 SUPERFAMILY SSF52540 3 242 3.91E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 Gene3D G3DSA:3.40.50.300 1 242 5.9E-84 T 14-10-2018 CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 Gene3D G3DSA:3.30.250.10 243 319 4.3E-22 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 SUPERFAMILY SSF54752 243 299 1.83E-18 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 Hamap MF_00268 Protein RecA [recA]. 2 304 45.766 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 ProSitePatterns PS00321 recA signature. 188 196 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CF65_01557 a7dd2dce5c9a262a8fea54192e61e123 325 Pfam PF00154 recA bacterial DNA recombination protein 1 243 5.5E-136 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CF65_02067 6cc9e0572e65114f0e11b287cf9b08a3 271 SUPERFAMILY SSF103481 171 267 3.66E-13 T 14-10-2018 CF65_02067 6cc9e0572e65114f0e11b287cf9b08a3 271 SUPERFAMILY SSF103481 31 130 1.05E-10 T 14-10-2018 CF65_02067 6cc9e0572e65114f0e11b287cf9b08a3 271 Pfam PF00892 EamA-like transporter family 141 266 1.8E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_02067 6cc9e0572e65114f0e11b287cf9b08a3 271 Pfam PF00892 EamA-like transporter family 2 126 4.9E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_02915 69ec063fbf4154892f5f183f07bfd2f1 107 Gene3D G3DSA:3.40.30.10 1 107 1.4E-35 T 14-10-2018 CF65_02915 69ec063fbf4154892f5f183f07bfd2f1 107 SUPERFAMILY SSF52833 2 106 6.61E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_02915 69ec063fbf4154892f5f183f07bfd2f1 107 Pfam PF00085 Thioredoxin 4 105 9.7E-33 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 CF65_02915 69ec063fbf4154892f5f183f07bfd2f1 107 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CF65_02915 69ec063fbf4154892f5f183f07bfd2f1 107 PRINTS PR00421 Thioredoxin family signature 23 31 9.7E-10 T 14-10-2018 CF65_02915 69ec063fbf4154892f5f183f07bfd2f1 107 PRINTS PR00421 Thioredoxin family signature 71 82 9.7E-10 T 14-10-2018 CF65_02915 69ec063fbf4154892f5f183f07bfd2f1 107 PRINTS PR00421 Thioredoxin family signature 31 40 9.7E-10 T 14-10-2018 CF65_02915 69ec063fbf4154892f5f183f07bfd2f1 107 PIRSF PIRSF000077 1 107 3.2E-44 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CF65_02915 69ec063fbf4154892f5f183f07bfd2f1 107 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 106 5.0E-39 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CF65_01642 274111b96a4efcf5f5dad1992f4e3950 342 PIRSF PIRSF002825 11 339 2.5E-62 T 14-10-2018 IPR026045 Ferric binding protein CF65_01642 274111b96a4efcf5f5dad1992f4e3950 342 SUPERFAMILY SSF53850 24 322 2.63E-61 T 14-10-2018 CF65_01642 274111b96a4efcf5f5dad1992f4e3950 342 Pfam PF13343 Bacterial extracellular solute-binding protein 92 320 1.9E-32 T 14-10-2018 CF65_01642 274111b96a4efcf5f5dad1992f4e3950 342 Gene3D G3DSA:3.40.190.10 133 319 2.1E-99 T 14-10-2018 CF65_01642 274111b96a4efcf5f5dad1992f4e3950 342 Gene3D G3DSA:3.40.190.10 31 305 2.1E-99 T 14-10-2018 CF65_01492 3534c18b55c01cde835c7d7ba9a6cefe 227 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 35 223 27.47 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CF65_01492 3534c18b55c01cde835c7d7ba9a6cefe 227 Pfam PF02527 rRNA small subunit methyltransferase G 42 221 7.1E-63 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CF65_01492 3534c18b55c01cde835c7d7ba9a6cefe 227 SUPERFAMILY SSF53335 26 226 1.01E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01492 3534c18b55c01cde835c7d7ba9a6cefe 227 Gene3D G3DSA:3.40.50.150 23 227 2.8E-68 T 14-10-2018 CF65_01492 3534c18b55c01cde835c7d7ba9a6cefe 227 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 48 226 1.1E-56 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CF65_01492 3534c18b55c01cde835c7d7ba9a6cefe 227 PIRSF PIRSF003078 19 227 2.4E-60 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CF65_00137 87d163372794f234dde2398187784f9a 177 Gene3D G3DSA:1.10.60.30 31 105 4.7E-24 T 14-10-2018 CF65_00137 87d163372794f234dde2398187784f9a 177 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 11 175 24.03 T 14-10-2018 IPR006839 Ribosome-associated, YjgA CF65_00137 87d163372794f234dde2398187784f9a 177 Pfam PF04751 Protein of unknown function (DUF615) 21 171 8.3E-57 T 14-10-2018 IPR006839 Ribosome-associated, YjgA CF65_00137 87d163372794f234dde2398187784f9a 177 SUPERFAMILY SSF158710 32 174 3.01E-52 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily CF65_00137 87d163372794f234dde2398187784f9a 177 Gene3D G3DSA:1.10.60.30 106 176 1.5E-27 T 14-10-2018 CF65_00137 87d163372794f234dde2398187784f9a 177 PIRSF PIRSF016183 3 177 4.8E-72 T 14-10-2018 IPR006839 Ribosome-associated, YjgA CF65_02626 9660cfd2ceba68a6b261b97009b2bd27 264 Pfam PF05117 Family of unknown function (DUF695) 8 136 3.6E-38 T 14-10-2018 IPR016097 Domain of unknown function DUF695 CF65_02626 9660cfd2ceba68a6b261b97009b2bd27 264 TIGRFAM TIGR01619 hyp_HI0040: TIGR01619 family protein 7 258 6.7E-93 T 14-10-2018 IPR006506 Conserved hypothetical protein CHP01619 CF65_02626 9660cfd2ceba68a6b261b97009b2bd27 264 Pfam PF06877 Regulator of ribonuclease activity B 145 254 1.6E-31 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain CF65_02626 9660cfd2ceba68a6b261b97009b2bd27 264 Gene3D G3DSA:3.30.70.970 129 262 1.0E-10 T 14-10-2018 IPR036701 RraB-like superfamily CF65_02626 9660cfd2ceba68a6b261b97009b2bd27 264 PIRSF PIRSF017962 5 264 2.7E-115 T 14-10-2018 IPR006506 Conserved hypothetical protein CHP01619 CF65_02626 9660cfd2ceba68a6b261b97009b2bd27 264 SUPERFAMILY SSF89946 127 259 3.53E-32 T 14-10-2018 IPR036701 RraB-like superfamily CF65_00172 e98bc05d9013d77e2835b446f741bbb5 349 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 25 341 2.0E-138 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CF65_00172 e98bc05d9013d77e2835b446f741bbb5 349 Gene3D G3DSA:3.20.20.70 28 269 1.8E-80 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_00172 e98bc05d9013d77e2835b446f741bbb5 349 Pfam PF01207 Dihydrouridine synthase (Dus) 36 340 3.1E-115 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CF65_00172 e98bc05d9013d77e2835b446f741bbb5 349 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 116 134 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CF65_00172 e98bc05d9013d77e2835b446f741bbb5 349 PIRSF PIRSF006621 22 344 1.2E-103 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CF65_00172 e98bc05d9013d77e2835b446f741bbb5 349 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 23 343 47.461 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 CF65_00172 e98bc05d9013d77e2835b446f741bbb5 349 SUPERFAMILY SSF51395 32 340 3.66E-91 T 14-10-2018 CF65_00172 e98bc05d9013d77e2835b446f741bbb5 349 Gene3D G3DSA:1.10.1200.80 273 344 7.2E-9 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CF65_02182 824c84e0cc53cce03b417ed079e0f4e8 250 Gene3D G3DSA:3.20.20.70 13 250 2.8E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02182 824c84e0cc53cce03b417ed079e0f4e8 250 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 63 81 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CF65_02182 824c84e0cc53cce03b417ed079e0f4e8 250 Pfam PF00218 Indole-3-glycerol phosphate synthase 16 250 1.1E-86 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CF65_02182 824c84e0cc53cce03b417ed079e0f4e8 250 SUPERFAMILY SSF51366 26 250 4.12E-71 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CF65_02015 2b092184fefb60402989922bb33fac61 194 Pfam PF13580 SIS domain 21 144 1.1E-17 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CF65_02015 2b092184fefb60402989922bb33fac61 194 Gene3D G3DSA:3.40.50.10490 1 194 5.0E-39 T 14-10-2018 CF65_02015 2b092184fefb60402989922bb33fac61 194 SUPERFAMILY SSF53697 2 190 2.89E-33 T 14-10-2018 CF65_01442 7fd58f9f74c1ae4ad32ce1a4c2c0bde2 455 Pfam PF13091 PLD-like domain 266 400 5.4E-16 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CF65_01442 7fd58f9f74c1ae4ad32ce1a4c2c0bde2 455 PIRSF PIRSF000850 1 455 4.6E-215 T 14-10-2018 CF65_01442 7fd58f9f74c1ae4ad32ce1a4c2c0bde2 455 SMART SM00155 134 160 0.1 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CF65_01442 7fd58f9f74c1ae4ad32ce1a4c2c0bde2 455 SMART SM00155 356 383 0.0023 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CF65_01442 7fd58f9f74c1ae4ad32ce1a4c2c0bde2 455 Gene3D G3DSA:3.30.870.10 17 451 4.1E-168 T 14-10-2018 CF65_01442 7fd58f9f74c1ae4ad32ce1a4c2c0bde2 455 SUPERFAMILY SSF56024 20 207 8.48E-23 T 14-10-2018 CF65_01442 7fd58f9f74c1ae4ad32ce1a4c2c0bde2 455 SUPERFAMILY SSF56024 263 397 1.04E-12 T 14-10-2018 CF65_01442 7fd58f9f74c1ae4ad32ce1a4c2c0bde2 455 Gene3D G3DSA:3.30.870.10 23 234 4.1E-168 T 14-10-2018 CF65_00054 a8b8a196f7d6dcb55e88c2d6319beb63 183 SUPERFAMILY SSF52833 47 178 9.28E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_00054 a8b8a196f7d6dcb55e88c2d6319beb63 183 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CF65_00054 a8b8a196f7d6dcb55e88c2d6319beb63 183 Pfam PF08534 Redoxin 42 165 8.8E-19 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CF65_00054 a8b8a196f7d6dcb55e88c2d6319beb63 183 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 8 178 3.6E-76 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 CF65_00054 a8b8a196f7d6dcb55e88c2d6319beb63 183 Gene3D G3DSA:3.40.30.10 22 182 1.6E-41 T 14-10-2018 CF65_00373 2a911c3b784386c6cf0b04f783c76e5a 221 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 1.2E-90 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CF65_00373 2a911c3b784386c6cf0b04f783c76e5a 221 SUPERFAMILY SSF100950 2 215 2.35E-70 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_00373 2a911c3b784386c6cf0b04f783c76e5a 221 Pfam PF01144 Coenzyme A transferase 6 197 9.7E-36 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CF65_00373 2a911c3b784386c6cf0b04f783c76e5a 221 SMART SM00882 5 200 8.6E-61 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CF65_00373 2a911c3b784386c6cf0b04f783c76e5a 221 Gene3D G3DSA:3.40.1080.10 1 219 1.3E-89 T 14-10-2018 CF65_03000 7ae0a042284d3c89901ce96bc63dc8af 222 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 54 63 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CF65_03000 7ae0a042284d3c89901ce96bc63dc8af 222 Gene3D G3DSA:3.40.470.10 1 221 3.1E-102 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CF65_03000 7ae0a042284d3c89901ce96bc63dc8af 222 Pfam PF03167 Uracil DNA glycosylase superfamily 51 206 1.3E-25 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CF65_03000 7ae0a042284d3c89901ce96bc63dc8af 222 SUPERFAMILY SSF52141 3 219 2.09E-95 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CF65_03000 7ae0a042284d3c89901ce96bc63dc8af 222 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 1 218 40.284 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CF65_03000 7ae0a042284d3c89901ce96bc63dc8af 222 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 2 211 5.5E-89 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CF65_03000 7ae0a042284d3c89901ce96bc63dc8af 222 SMART SM00986 46 207 3.3E-39 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CF65_03000 7ae0a042284d3c89901ce96bc63dc8af 222 SMART SM00987 46 207 3.3E-39 T 14-10-2018 CF65_01820 6df408497cec02acd9327612b7178d14 257 SMART SM00382 35 205 3.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01820 6df408497cec02acd9327612b7178d14 257 Gene3D G3DSA:3.40.50.300 6 253 3.2E-58 T 14-10-2018 CF65_01820 6df408497cec02acd9327612b7178d14 257 Pfam PF00005 ABC transporter 26 155 4.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01820 6df408497cec02acd9327612b7178d14 257 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01820 6df408497cec02acd9327612b7178d14 257 SUPERFAMILY SSF52540 9 222 2.39E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00519 409eb0b3f037f39e13fe6948fe2163ba 201 SMART SM01266 5 60 7.5E-15 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CF65_00519 409eb0b3f037f39e13fe6948fe2163ba 201 Pfam PF12464 Maltose acetyltransferase 7 58 4.6E-11 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CF65_00519 409eb0b3f037f39e13fe6948fe2163ba 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 5.8E-10 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_00519 409eb0b3f037f39e13fe6948fe2163ba 201 SUPERFAMILY SSF51161 3 190 2.5E-51 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily CF65_00519 409eb0b3f037f39e13fe6948fe2163ba 201 Gene3D G3DSA:2.160.10.10 1 198 3.0E-65 T 14-10-2018 CF65_00519 409eb0b3f037f39e13fe6948fe2163ba 201 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CF65_01648 0b1e08742b11980b5bb6ecebb53202dd 683 SUPERFAMILY SSF51445 180 654 3.17E-80 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily CF65_01648 0b1e08742b11980b5bb6ecebb53202dd 683 Gene3D G3DSA:3.20.20.80 176 415 2.0E-52 T 14-10-2018 CF65_01648 0b1e08742b11980b5bb6ecebb53202dd 683 PIRSF PIRSF036917 1 683 0.0 T 14-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 CF65_01648 0b1e08742b11980b5bb6ecebb53202dd 683 Gene3D G3DSA:3.20.20.80 416 652 1.2E-31 T 14-10-2018 CF65_01648 0b1e08742b11980b5bb6ecebb53202dd 683 SMART SM00642 193 645 3.4E-80 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CF65_01648 0b1e08742b11980b5bb6ecebb53202dd 683 Pfam PF00128 Alpha amylase, catalytic domain 226 602 1.7E-45 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CF65_00694 834b3eed2672fa9c8cdee16a308a86f3 194 Gene3D G3DSA:2.70.40.10 1 194 7.2E-49 T 14-10-2018 IPR036157 dUTPase-like superfamily CF65_00694 834b3eed2672fa9c8cdee16a308a86f3 194 Pfam PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) 3 138 5.4E-9 T 14-10-2018 IPR010550 Deoxycytidine triphosphate deaminase, bacterial GO:0008829|GO:0009394 CF65_00694 834b3eed2672fa9c8cdee16a308a86f3 194 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 2.1E-66 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 CF65_00694 834b3eed2672fa9c8cdee16a308a86f3 194 SUPERFAMILY SSF51283 1 192 2.75E-57 T 14-10-2018 IPR036157 dUTPase-like superfamily CF65_00694 834b3eed2672fa9c8cdee16a308a86f3 194 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 33.17 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 CF65_01067 09e2466a5dc455c4dade10027755b998 240 Gene3D G3DSA:3.40.50.10490 8 216 4.3E-90 T 14-10-2018 CF65_01067 09e2466a5dc455c4dade10027755b998 240 SUPERFAMILY SSF52313 6 231 2.22E-94 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CF65_01067 09e2466a5dc455c4dade10027755b998 240 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 5.0E-106 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01067 09e2466a5dc455c4dade10027755b998 240 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CF65_01067 09e2466a5dc455c4dade10027755b998 240 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.171 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01067 09e2466a5dc455c4dade10027755b998 240 Gene3D G3DSA:1.10.287.610 103 150 4.3E-90 T 14-10-2018 CF65_01067 09e2466a5dc455c4dade10027755b998 240 Pfam PF00318 Ribosomal protein S2 9 224 7.6E-92 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01067 09e2466a5dc455c4dade10027755b998 240 PRINTS PR00395 Ribosomal protein S2 signature 87 104 4.3E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01067 09e2466a5dc455c4dade10027755b998 240 PRINTS PR00395 Ribosomal protein S2 signature 6 24 4.3E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01067 09e2466a5dc455c4dade10027755b998 240 PRINTS PR00395 Ribosomal protein S2 signature 158 175 4.3E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01067 09e2466a5dc455c4dade10027755b998 240 PRINTS PR00395 Ribosomal protein S2 signature 37 46 4.3E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01067 09e2466a5dc455c4dade10027755b998 240 PRINTS PR00395 Ribosomal protein S2 signature 175 186 4.3E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01067 09e2466a5dc455c4dade10027755b998 240 PRINTS PR00395 Ribosomal protein S2 signature 196 210 4.3E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01067 09e2466a5dc455c4dade10027755b998 240 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 SUPERFAMILY SSF51735 10 277 1.72E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 215 1.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 196 1.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 167 1.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 238 258 1.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 Gene3D G3DSA:3.40.50.720 2 281 4.0E-77 T 14-10-2018 CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 2.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 196 2.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 2.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 Pfam PF00106 short chain dehydrogenase 12 214 2.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02383 88333bf7c750af90ac85ca0a33e92644 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 164 192 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CF65_01149 3c8b2078066a01e76d28fa36dc30bb14 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.5E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01149 3c8b2078066a01e76d28fa36dc30bb14 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 399 418 1.5E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01149 3c8b2078066a01e76d28fa36dc30bb14 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 1.5E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01149 3c8b2078066a01e76d28fa36dc30bb14 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 323 339 1.5E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01149 3c8b2078066a01e76d28fa36dc30bb14 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.5E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01149 3c8b2078066a01e76d28fa36dc30bb14 693 Pfam PF05746 DALR anticodon binding domain 587 680 2.5E-7 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CF65_01149 3c8b2078066a01e76d28fa36dc30bb14 693 SUPERFAMILY SSF109604 354 503 3.14E-17 T 14-10-2018 CF65_01149 3c8b2078066a01e76d28fa36dc30bb14 693 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 692 26.149 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01149 3c8b2078066a01e76d28fa36dc30bb14 693 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 556 2.1E-209 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01149 3c8b2078066a01e76d28fa36dc30bb14 693 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 693 0.0 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_00369 134a4f622c2396cb5acda77ae52aa7de 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site CF65_00369 134a4f622c2396cb5acda77ae52aa7de 209 SUPERFAMILY SSF50447 1 208 2.38E-78 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CF65_00369 134a4f622c2396cb5acda77ae52aa7de 209 Gene3D G3DSA:2.40.30.10 129 209 4.7E-17 T 14-10-2018 CF65_00369 134a4f622c2396cb5acda77ae52aa7de 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 8.0E-90 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00369 134a4f622c2396cb5acda77ae52aa7de 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.171 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00369 134a4f622c2396cb5acda77ae52aa7de 209 Gene3D G3DSA:2.40.50.620 32 94 1.7E-16 T 14-10-2018 CF65_00369 134a4f622c2396cb5acda77ae52aa7de 209 Pfam PF00297 Ribosomal protein L3 65 182 1.3E-13 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02919 8d75bec8732ca9acb8d31ed1e404249f 340 Gene3D G3DSA:1.10.530.10 8 140 2.7E-5 T 14-10-2018 CF65_02919 8d75bec8732ca9acb8d31ed1e404249f 340 Gene3D G3DSA:3.40.50.300 141 328 1.1E-21 T 14-10-2018 CF65_02919 8d75bec8732ca9acb8d31ed1e404249f 340 Pfam PF01464 Transglycosylase SLT domain 13 131 6.6E-12 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 CF65_02919 8d75bec8732ca9acb8d31ed1e404249f 340 SUPERFAMILY SSF53955 15 124 1.3E-12 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily CF65_02919 8d75bec8732ca9acb8d31ed1e404249f 340 SUPERFAMILY SSF52540 131 312 4.62E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02563 5872e740631312cac3d65ba3c095ba01 314 SUPERFAMILY SSF52922 181 313 9.82E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CF65_02563 5872e740631312cac3d65ba3c095ba01 314 Pfam PF02780 Transketolase, C-terminal domain 186 306 2.4E-34 T 14-10-2018 IPR033248 Transketolase, C-terminal domain CF65_02563 5872e740631312cac3d65ba3c095ba01 314 Pfam PF02779 Transketolase, pyrimidine binding domain 10 161 1.4E-19 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02563 5872e740631312cac3d65ba3c095ba01 314 Gene3D G3DSA:3.40.50.920 186 314 9.3E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CF65_02563 5872e740631312cac3d65ba3c095ba01 314 SUPERFAMILY SSF52518 10 186 3.05E-35 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_02563 5872e740631312cac3d65ba3c095ba01 314 SMART SM00861 10 176 1.0E-25 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02563 5872e740631312cac3d65ba3c095ba01 314 Gene3D G3DSA:3.40.50.970 4 185 5.5E-41 T 14-10-2018 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 SMART SM01274 68 254 4.8E-86 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 SMART SM00919 260 473 9.8E-67 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 SUPERFAMILY SSF51735 261 473 1.71E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 Pfam PF00390 Malic enzyme, N-terminal domain 68 246 2.0E-64 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 ProSitePatterns PS00331 Malic enzymes signature. 256 272 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 Pfam PF03949 Malic enzyme, NAD binding domain 260 473 9.6E-80 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 PRINTS PR00072 Malic enzyme signature 397 413 5.1E-65 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 PRINTS PR00072 Malic enzyme signature 231 249 5.1E-65 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 PRINTS PR00072 Malic enzyme signature 256 272 5.1E-65 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 PRINTS PR00072 Malic enzyme signature 74 98 5.1E-65 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 PRINTS PR00072 Malic enzyme signature 172 194 5.1E-65 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 PRINTS PR00072 Malic enzyme signature 287 303 5.1E-65 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 PRINTS PR00072 Malic enzyme signature 136 165 5.1E-65 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 PIRSF PIRSF000106 1 474 1.4E-183 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 Gene3D G3DSA:3.40.50.720 258 474 4.1E-79 T 14-10-2018 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 Gene3D G3DSA:3.40.50.10380 2 257 4.4E-96 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CF65_00015 aeb7185d00d3cace9316ff4124f253b5 474 SUPERFAMILY SSF53223 4 259 1.87E-93 T 14-10-2018 CF65_02230 85a3a7629cc73c3b7ff6e50fc26c97fe 518 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 254 1.6E-54 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CF65_02230 85a3a7629cc73c3b7ff6e50fc26c97fe 518 Gene3D G3DSA:3.30.420.40 2 245 6.5E-65 T 14-10-2018 CF65_02230 85a3a7629cc73c3b7ff6e50fc26c97fe 518 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 292 461 7.4E-19 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CF65_02230 85a3a7629cc73c3b7ff6e50fc26c97fe 518 Gene3D G3DSA:3.30.420.40 247 513 2.0E-50 T 14-10-2018 CF65_02230 85a3a7629cc73c3b7ff6e50fc26c97fe 518 PIRSF PIRSF000538 5 513 1.3E-115 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CF65_02230 85a3a7629cc73c3b7ff6e50fc26c97fe 518 SUPERFAMILY SSF53067 256 507 5.58E-47 T 14-10-2018 CF65_02230 85a3a7629cc73c3b7ff6e50fc26c97fe 518 SUPERFAMILY SSF53067 7 257 4.25E-61 T 14-10-2018 CF65_00347 34311b2cc59af44d51f2495db5be3a5a 142 SMART SM00649 9 141 5.9E-83 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CF65_00347 34311b2cc59af44d51f2495db5be3a5a 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 6.8E-30 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal CF65_00347 34311b2cc59af44d51f2495db5be3a5a 142 SUPERFAMILY SSF46906 68 141 3.14E-26 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CF65_00347 34311b2cc59af44d51f2495db5be3a5a 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.824 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CF65_00347 34311b2cc59af44d51f2495db5be3a5a 142 SUPERFAMILY SSF54747 3 73 5.36E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CF65_00347 34311b2cc59af44d51f2495db5be3a5a 142 Gene3D G3DSA:1.10.10.250 73 141 1.0E-27 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CF65_00347 34311b2cc59af44d51f2495db5be3a5a 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.3E-24 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CF65_00347 34311b2cc59af44d51f2495db5be3a5a 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 14-10-2018 CF65_00347 34311b2cc59af44d51f2495db5be3a5a 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.2E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00347 34311b2cc59af44d51f2495db5be3a5a 142 Gene3D G3DSA:3.30.1550.10 2 72 5.9E-35 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CF65_00539 3f6aafb296115ddf14f8758c9e1ddeb1 308 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 307 9.7E-135 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CF65_00539 3f6aafb296115ddf14f8758c9e1ddeb1 308 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 235 1.1E-47 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CF65_00539 3f6aafb296115ddf14f8758c9e1ddeb1 308 SUPERFAMILY SSF51735 1 305 1.01E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_00539 3f6aafb296115ddf14f8758c9e1ddeb1 308 Gene3D G3DSA:3.40.50.720 3 301 8.3E-118 T 14-10-2018 CF65_00539 3f6aafb296115ddf14f8758c9e1ddeb1 308 Gene3D G3DSA:3.90.25.10 167 289 8.3E-118 T 14-10-2018 CF65_00539 3f6aafb296115ddf14f8758c9e1ddeb1 308 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 308 47.656 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CF65_01099 5e1bf373a49f40fd94ba67bbe84b7a41 287 Gene3D G3DSA:1.10.8.100 206 273 9.1E-25 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CF65_01099 5e1bf373a49f40fd94ba67bbe84b7a41 287 SMART SM00650 25 203 4.3E-86 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CF65_01099 5e1bf373a49f40fd94ba67bbe84b7a41 287 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 269 1.7E-92 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CF65_01099 5e1bf373a49f40fd94ba67bbe84b7a41 287 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 270 7.8E-90 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CF65_01099 5e1bf373a49f40fd94ba67bbe84b7a41 287 SUPERFAMILY SSF53335 17 271 1.24E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01099 5e1bf373a49f40fd94ba67bbe84b7a41 287 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CF65_01099 5e1bf373a49f40fd94ba67bbe84b7a41 287 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 270 56.256 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CF65_01099 5e1bf373a49f40fd94ba67bbe84b7a41 287 Gene3D G3DSA:3.40.50.150 1 205 4.5E-66 T 14-10-2018 CF65_02051 287d8752bfbc599f8b587efbc7853e7b 296 Gene3D G3DSA:1.10.600.10 1 296 1.6E-96 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily CF65_02051 287d8752bfbc599f8b587efbc7853e7b 296 SUPERFAMILY SSF48576 4 286 2.67E-84 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily CF65_02051 287d8752bfbc599f8b587efbc7853e7b 296 Pfam PF00348 Polyprenyl synthetase 33 269 3.7E-55 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 CF65_02051 287d8752bfbc599f8b587efbc7853e7b 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site CF65_02051 287d8752bfbc599f8b587efbc7853e7b 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site CF65_02634 12661249c2ccde388ebb7a2db1dbb296 289 Gene3D G3DSA:3.90.550.10 2 258 7.2E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02634 12661249c2ccde388ebb7a2db1dbb296 289 SUPERFAMILY SSF53448 7 243 1.93E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02634 12661249c2ccde388ebb7a2db1dbb296 289 Pfam PF00535 Glycosyl transferase family 2 7 101 3.4E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CF65_00468 38f4c7738732792fe085b0352785e45c 414 PRINTS PR00166 Aromatic amino acid permease signature 347 366 3.4E-103 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_00468 38f4c7738732792fe085b0352785e45c 414 PRINTS PR00166 Aromatic amino acid permease signature 14 37 3.4E-103 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_00468 38f4c7738732792fe085b0352785e45c 414 PRINTS PR00166 Aromatic amino acid permease signature 41 60 3.4E-103 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_00468 38f4c7738732792fe085b0352785e45c 414 PRINTS PR00166 Aromatic amino acid permease signature 292 311 3.4E-103 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_00468 38f4c7738732792fe085b0352785e45c 414 PRINTS PR00166 Aromatic amino acid permease signature 86 106 3.4E-103 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_00468 38f4c7738732792fe085b0352785e45c 414 PRINTS PR00166 Aromatic amino acid permease signature 192 214 3.4E-103 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_00468 38f4c7738732792fe085b0352785e45c 414 PRINTS PR00166 Aromatic amino acid permease signature 153 173 3.4E-103 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_00468 38f4c7738732792fe085b0352785e45c 414 PRINTS PR00166 Aromatic amino acid permease signature 231 250 3.4E-103 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_00468 38f4c7738732792fe085b0352785e45c 414 PRINTS PR00166 Aromatic amino acid permease signature 326 344 3.4E-103 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_00468 38f4c7738732792fe085b0352785e45c 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 11 394 1.1E-158 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_00468 38f4c7738732792fe085b0352785e45c 414 Gene3D G3DSA:1.20.1740.10 3 410 7.6E-9 T 14-10-2018 CF65_00468 38f4c7738732792fe085b0352785e45c 414 PIRSF PIRSF006060 320 410 60.0 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CF65_00468 38f4c7738732792fe085b0352785e45c 414 PIRSF PIRSF006060 3 304 8.5E-13 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CF65_00468 38f4c7738732792fe085b0352785e45c 414 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 21 37 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CF65_00468 38f4c7738732792fe085b0352785e45c 414 Pfam PF03222 Tryptophan/tyrosine permease family 5 400 2.4E-153 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CF65_00698 3609b491981b3a6e53b7a2cea2b97d4c 347 PIRSF PIRSF002825 2 344 2.5E-63 T 14-10-2018 IPR026045 Ferric binding protein CF65_00698 3609b491981b3a6e53b7a2cea2b97d4c 347 SUPERFAMILY SSF53850 29 339 4.5E-65 T 14-10-2018 CF65_00698 3609b491981b3a6e53b7a2cea2b97d4c 347 Gene3D G3DSA:3.40.190.10 136 325 6.2E-109 T 14-10-2018 CF65_00698 3609b491981b3a6e53b7a2cea2b97d4c 347 Gene3D G3DSA:3.40.190.10 34 310 6.2E-109 T 14-10-2018 CF65_00698 3609b491981b3a6e53b7a2cea2b97d4c 347 Pfam PF13343 Bacterial extracellular solute-binding protein 78 289 3.1E-29 T 14-10-2018 CF65_02306 b19d6c65b943e24d5cf9b0ac4d0326b0 88 Pfam PF01192 RNA polymerase Rpb6 10 59 1.7E-14 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CF65_02306 b19d6c65b943e24d5cf9b0ac4d0326b0 88 Gene3D G3DSA:3.90.940.10 1 88 1.1E-25 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CF65_02306 b19d6c65b943e24d5cf9b0ac4d0326b0 88 SMART SM01409 8 61 7.1E-14 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CF65_02306 b19d6c65b943e24d5cf9b0ac4d0326b0 88 SUPERFAMILY SSF63562 1 76 4.36E-23 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CF65_02306 b19d6c65b943e24d5cf9b0ac4d0326b0 88 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 9.2E-29 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_02306 b19d6c65b943e24d5cf9b0ac4d0326b0 88 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.509 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CF65_01216 c04c2da8336090e87c8ecb2b2bba9731 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 236 9.3E-21 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CF65_01216 c04c2da8336090e87c8ecb2b2bba9731 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 14-10-2018 CF65_01216 c04c2da8336090e87c8ecb2b2bba9731 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 263 5.9E-52 T 14-10-2018 IPR000150 Cof family GO:0016787 CF65_01216 c04c2da8336090e87c8ecb2b2bba9731 270 SUPERFAMILY SSF56784 6 266 1.78E-56 T 14-10-2018 IPR036412 HAD-like superfamily CF65_01216 c04c2da8336090e87c8ecb2b2bba9731 270 Gene3D G3DSA:3.30.1240.10 93 192 7.6E-62 T 14-10-2018 CF65_01216 c04c2da8336090e87c8ecb2b2bba9731 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 263 1.2E-50 T 14-10-2018 CF65_01216 c04c2da8336090e87c8ecb2b2bba9731 270 Gene3D G3DSA:3.40.50.1000 11 260 7.6E-62 T 14-10-2018 IPR023214 HAD superfamily CF65_00941 64e1eae4159e351fc54e9f0d9c2d5196 489 PIRSF PIRSF002457 7 488 3.9E-122 T 14-10-2018 IPR030676 Citrate carrier CitT-related CF65_00941 64e1eae4159e351fc54e9f0d9c2d5196 489 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 482 4.7E-67 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CF65_00941 64e1eae4159e351fc54e9f0d9c2d5196 489 Pfam PF00939 Sodium:sulfate symporter transmembrane region 26 486 3.4E-71 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CF65_01890 da926239f37b9509506c5f8abff79045 448 Gene3D G3DSA:1.20.59.20 235 320 7.3E-23 T 14-10-2018 CF65_01890 da926239f37b9509506c5f8abff79045 448 Pfam PF11734 TilS substrate C-terminal domain 383 445 7.3E-15 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CF65_01890 da926239f37b9509506c5f8abff79045 448 SMART SM00977 381 447 1.2E-12 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CF65_01890 da926239f37b9509506c5f8abff79045 448 Pfam PF09179 TilS substrate binding domain 252 317 1.9E-20 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CF65_01890 da926239f37b9509506c5f8abff79045 448 SUPERFAMILY SSF52402 16 234 2.07E-57 T 14-10-2018 CF65_01890 da926239f37b9509506c5f8abff79045 448 SUPERFAMILY SSF56037 324 435 7.06E-19 T 14-10-2018 CF65_01890 da926239f37b9509506c5f8abff79045 448 SUPERFAMILY SSF82829 239 320 4.97E-24 T 14-10-2018 CF65_01890 da926239f37b9509506c5f8abff79045 448 Gene3D G3DSA:3.40.50.620 12 234 4.2E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01890 da926239f37b9509506c5f8abff79045 448 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 381 426 3.1E-13 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CF65_01890 da926239f37b9509506c5f8abff79045 448 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 204 1.8E-53 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CF65_01890 da926239f37b9509506c5f8abff79045 448 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 309 23.278 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CF65_01890 da926239f37b9509506c5f8abff79045 448 Pfam PF01171 PP-loop family 23 200 5.8E-60 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CF65_00856 fcbf8c091d233f6efb05e33e47405639 239 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 44 57 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site CF65_00856 fcbf8c091d233f6efb05e33e47405639 239 Gene3D G3DSA:3.40.190.10 108 197 9.3E-69 T 14-10-2018 CF65_00856 fcbf8c091d233f6efb05e33e47405639 239 SUPERFAMILY SSF53850 1 238 9.42E-62 T 14-10-2018 CF65_00856 fcbf8c091d233f6efb05e33e47405639 239 SMART SM00062 21 239 1.3E-70 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CF65_00856 fcbf8c091d233f6efb05e33e47405639 239 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 237 2.2E-78 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 CF65_00856 fcbf8c091d233f6efb05e33e47405639 239 Gene3D G3DSA:3.40.190.10 25 236 9.3E-69 T 14-10-2018 CF65_00856 fcbf8c091d233f6efb05e33e47405639 239 SMART SM00079 21 239 0.008 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CF65_00856 fcbf8c091d233f6efb05e33e47405639 239 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 22 238 2.9E-62 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CF65_02201 ee3b7f43b6abc4fc6cb78ab5e82206ec 388 Pfam PF00593 TonB dependent receptor 45 387 4.1E-41 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_02201 ee3b7f43b6abc4fc6cb78ab5e82206ec 388 Gene3D G3DSA:2.40.170.20 5 388 8.3E-93 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_02201 ee3b7f43b6abc4fc6cb78ab5e82206ec 388 SUPERFAMILY SSF56935 45 388 4.03E-38 T 14-10-2018 CF65_02201 ee3b7f43b6abc4fc6cb78ab5e82206ec 388 TIGRFAM TIGR01776 TonB-tbp-lbp: TonB-dependent lactoferrin and transferrin receptors 3 388 3.6E-146 T 14-10-2018 IPR010948 TonB-dependent lactoferrin/transferrin receptor GO:0015091|GO:0015682|GO:0019867 CF65_02201 ee3b7f43b6abc4fc6cb78ab5e82206ec 388 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 371 388 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site CF65_00195 195b4f05b90bf5a1eb8666b850d24829 144 Pfam PF10675 Protein of unknown function (DUF2489) 14 137 3.9E-46 T 14-10-2018 IPR019617 Domain of unknown function DUF2489 CF65_01744 4de0d9240734ea153f97a175423ca07b 300 SMART SM00937 20 130 9.4E-58 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 CF65_01744 4de0d9240734ea153f97a175423ca07b 300 Gene3D G3DSA:1.20.58.410 1 51 2.5E-12 T 14-10-2018 CF65_01744 4de0d9240734ea153f97a175423ca07b 300 Gene3D G3DSA:3.30.160.20 161 256 2.2E-97 T 14-10-2018 CF65_01744 4de0d9240734ea153f97a175423ca07b 300 SUPERFAMILY SSF75620 2 299 1.7E-127 T 14-10-2018 CF65_01744 4de0d9240734ea153f97a175423ca07b 300 Pfam PF00472 RF-1 domain 163 272 5.1E-43 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CF65_01744 4de0d9240734ea153f97a175423ca07b 300 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 300 32.994 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CF65_01744 4de0d9240734ea153f97a175423ca07b 300 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 298 2.8E-153 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CF65_01744 4de0d9240734ea153f97a175423ca07b 300 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 180 196 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CF65_01744 4de0d9240734ea153f97a175423ca07b 300 Pfam PF03462 PCRF domain 1 153 1.4E-48 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 CF65_01744 4de0d9240734ea153f97a175423ca07b 300 Gene3D G3DSA:3.30.70.1660 65 293 2.2E-97 T 14-10-2018 CF65_02020 0ecaa0e9a10764033c7ed0a85990f18c 265 SUPERFAMILY SSF53790 2 209 3.79E-74 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CF65_02020 0ecaa0e9a10764033c7ed0a85990f18c 265 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 211 31.367 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CF65_02020 0ecaa0e9a10764033c7ed0a85990f18c 265 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 261 4.1E-107 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CF65_02020 0ecaa0e9a10764033c7ed0a85990f18c 265 Gene3D G3DSA:3.30.950.10 98 218 4.1E-43 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CF65_02020 0ecaa0e9a10764033c7ed0a85990f18c 265 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 184 4.1E-19 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CF65_02020 0ecaa0e9a10764033c7ed0a85990f18c 265 Gene3D G3DSA:3.40.1010.10 1 97 1.4E-35 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CF65_02020 0ecaa0e9a10764033c7ed0a85990f18c 265 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 68 79 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 CF65_02020 0ecaa0e9a10764033c7ed0a85990f18c 265 PIRSF PIRSF005917 1 264 6.1E-96 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CF65_00209 979e7b26deb3f72d606500ea7580da9d 290 Gene3D G3DSA:3.40.50.2300 123 257 1.5E-97 T 14-10-2018 CF65_00209 979e7b26deb3f72d606500ea7580da9d 290 SUPERFAMILY SSF53822 23 288 2.08E-80 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_00209 979e7b26deb3f72d606500ea7580da9d 290 Pfam PF13407 Periplasmic binding protein domain 25 276 5.3E-59 T 14-10-2018 IPR025997 Periplasmic binding protein CF65_00209 979e7b26deb3f72d606500ea7580da9d 290 Gene3D G3DSA:3.40.50.2300 29 276 1.5E-97 T 14-10-2018 CF65_02961 89613ba5615146f1562738ab6d5fb2fa 152 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 98 2.6E-22 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CF65_02961 89613ba5615146f1562738ab6d5fb2fa 152 Gene3D G3DSA:3.40.50.720 2 141 3.7E-29 T 14-10-2018 CF65_02961 89613ba5615146f1562738ab6d5fb2fa 152 SUPERFAMILY SSF51735 6 112 1.77E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_00151 83e5cc59707899b585cd0fd00828b607 709 SUPERFAMILY SSF54791 553 638 4.55E-22 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 690 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 Pfam PF00575 S1 RNA binding domain 618 689 1.3E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 SUPERFAMILY SSF50249 619 694 1.0E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_00151 83e5cc59707899b585cd0fd00828b607 709 Gene3D G3DSA:3.30.1370.10 549 620 3.7E-19 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 SUPERFAMILY SSF54211 3 143 3.8E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00151 83e5cc59707899b585cd0fd00828b607 709 Pfam PF00013 KH domain 555 613 4.0E-10 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 SUPERFAMILY SSF55666 144 234 1.57E-30 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 Gene3D G3DSA:3.30.230.70 1 228 5.8E-80 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 6.3E-15 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 Pfam PF03725 3' exoribonuclease family, domain 2 459 527 6.0E-6 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 SUPERFAMILY SSF54211 291 487 5.57E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00151 83e5cc59707899b585cd0fd00828b607 709 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 319 9.3E-24 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 30.306 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 PIRSF PIRSF005499 1 709 1.7E-297 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 Gene3D G3DSA:2.40.50.140 621 691 1.0E-27 T 14-10-2018 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 SMART SM00316 619 689 1.9E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 SUPERFAMILY SSF55666 449 548 8.41E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 Gene3D G3DSA:3.30.230.70 232 548 2.4E-115 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 SMART SM00322 551 616 3.6E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 3.6E-18 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CF65_00151 83e5cc59707899b585cd0fd00828b607 709 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 2.3E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 SUPERFAMILY SSF53738 41 233 8.24E-39 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 50 188 2.7E-36 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 Gene3D G3DSA:3.30.310.50 445 539 7.3E-9 T 14-10-2018 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 SUPERFAMILY SSF53738 302 439 5.1E-26 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 SUPERFAMILY SSF53738 210 313 1.33E-22 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 Gene3D G3DSA:3.40.120.10 322 440 4.2E-29 T 14-10-2018 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 Gene3D G3DSA:3.40.120.10 41 195 3.8E-43 T 14-10-2018 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 323 437 5.0E-15 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 213 314 8.5E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 476 532 3.4E-13 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 Gene3D G3DSA:3.40.120.10 209 321 4.0E-21 T 14-10-2018 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 SUPERFAMILY SSF55957 426 551 9.16E-20 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00452 897ac009d271cbdd82459d67e0f4d311 552 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 145 154 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00021 7aad4d56c91f6827a8506884ee9386e5 969 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 868 891 0.0019 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CF65_00021 7aad4d56c91f6827a8506884ee9386e5 969 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 930 954 7.0E-7 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CF65_00021 7aad4d56c91f6827a8506884ee9386e5 969 SUPERFAMILY SSF57783 930 954 1.6E-6 T 14-10-2018 CF65_00021 7aad4d56c91f6827a8506884ee9386e5 969 Gene3D G3DSA:3.40.50.300 663 849 1.7E-24 T 14-10-2018 CF65_00021 7aad4d56c91f6827a8506884ee9386e5 969 Gene3D G3DSA:3.40.50.300 440 659 1.5E-25 T 14-10-2018 CF65_00021 7aad4d56c91f6827a8506884ee9386e5 969 Gene3D G3DSA:3.40.50.300 207 358 1.4E-22 T 14-10-2018 CF65_00021 7aad4d56c91f6827a8506884ee9386e5 969 Pfam PF00580 UvrD/REP helicase N-terminal domain 211 650 7.7E-39 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CF65_00021 7aad4d56c91f6827a8506884ee9386e5 969 SUPERFAMILY SSF52540 210 846 1.72E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00504 6dd49ed8f76dbfb2c3f15c4fead448f3 433 Pfam PF13635 Domain of unknown function (DUF4143) 221 383 5.3E-22 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 CF65_00504 6dd49ed8f76dbfb2c3f15c4fead448f3 433 Pfam PF13173 AAA domain 17 152 7.8E-28 T 14-10-2018 CF65_00504 6dd49ed8f76dbfb2c3f15c4fead448f3 433 SUPERFAMILY SSF52540 6 214 8.74E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01024 09cfff05dee4c3e4b9128dfeb4b4f958 362 SUPERFAMILY SSF143631 44 360 2.88E-97 T 14-10-2018 IPR003374 ApbE-like superfamily CF65_01024 09cfff05dee4c3e4b9128dfeb4b4f958 362 Gene3D G3DSA:3.10.520.20 31 362 4.1E-113 T 14-10-2018 CF65_01024 09cfff05dee4c3e4b9128dfeb4b4f958 362 PIRSF PIRSF006268 13 362 5.5E-93 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CF65_01024 09cfff05dee4c3e4b9128dfeb4b4f958 362 Pfam PF02424 ApbE family 52 334 6.9E-85 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CF65_02974 b8286e719069b711e154b0c8ce2c7928 225 Pfam PF13309 HTH domain 162 219 2.3E-15 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain CF65_02974 b8286e719069b711e154b0c8ce2c7928 225 Pfam PF08348 YheO-like PAS domain 9 117 1.4E-28 T 14-10-2018 IPR013559 YheO-like CF65_02974 b8286e719069b711e154b0c8ce2c7928 225 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 1 121 5.0E-35 T 14-10-2018 IPR013559 YheO-like CF65_02552 d4e90834d2b6f45d7f1c57e88f18a24c 282 Gene3D G3DSA:1.10.3470.10 39 272 7.1E-9 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_02552 d4e90834d2b6f45d7f1c57e88f18a24c 282 SUPERFAMILY SSF81345 8 266 4.18E-43 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_02552 d4e90834d2b6f45d7f1c57e88f18a24c 282 Pfam PF00950 ABC 3 transport family 13 268 1.3E-92 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CF65_00550 0b6bb4046b7d008027b5d20be33571a2 226 Gene3D G3DSA:3.30.70.20 92 175 4.1E-10 T 14-10-2018 CF65_00550 0b6bb4046b7d008027b5d20be33571a2 226 Gene3D G3DSA:3.30.70.20 11 88 2.9E-11 T 14-10-2018 CF65_00550 0b6bb4046b7d008027b5d20be33571a2 226 Pfam PF12838 4Fe-4S dicluster domain 16 71 4.6E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00550 0b6bb4046b7d008027b5d20be33571a2 226 Pfam PF12838 4Fe-4S dicluster domain 102 152 1.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00550 0b6bb4046b7d008027b5d20be33571a2 226 SUPERFAMILY SSF54862 15 175 6.28E-26 T 14-10-2018 CF65_00550 0b6bb4046b7d008027b5d20be33571a2 226 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 1 173 1.0E-70 T 14-10-2018 IPR004494 MauM/NapG ferredoxin-type protein CF65_00550 0b6bb4046b7d008027b5d20be33571a2 226 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 17 28 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02837 84a8e5ee16282becb4b10a85966f168c 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 14-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 CF65_02837 84a8e5ee16282becb4b10a85966f168c 134 PIRSF PIRSF003230 1 134 4.9E-47 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CF65_02837 84a8e5ee16282becb4b10a85966f168c 134 SUPERFAMILY SSF54637 4 132 1.31E-39 T 14-10-2018 IPR029069 HotDog domain superfamily CF65_02837 84a8e5ee16282becb4b10a85966f168c 134 Pfam PF03061 Thioesterase superfamily 20 105 2.1E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CF65_02837 84a8e5ee16282becb4b10a85966f168c 134 Gene3D G3DSA:3.10.129.10 1 134 7.3E-39 T 14-10-2018 CF65_02837 84a8e5ee16282becb4b10a85966f168c 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 10 125 1.9E-41 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CF65_02837 84a8e5ee16282becb4b10a85966f168c 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 129 2.7E-51 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 CF65_00439 13ecb30d8b9514bdccb20c2d7a74519c 526 Gene3D G3DSA:1.10.10.2600 192 308 5.6E-8 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily CF65_00439 13ecb30d8b9514bdccb20c2d7a74519c 526 SUPERFAMILY SSF53041 7 156 7.46E-23 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CF65_00439 13ecb30d8b9514bdccb20c2d7a74519c 526 Pfam PF07508 Recombinase 203 307 5.7E-19 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CF65_00439 13ecb30d8b9514bdccb20c2d7a74519c 526 SMART SM00857 7 157 8.5E-33 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CF65_00439 13ecb30d8b9514bdccb20c2d7a74519c 526 Pfam PF00239 Resolvase, N terminal domain 7 155 4.4E-20 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CF65_00439 13ecb30d8b9514bdccb20c2d7a74519c 526 Gene3D G3DSA:3.40.50.1390 2 161 5.7E-30 T 14-10-2018 CF65_01687 f9eb4035dd5944b9d1364bc4d8f6ddc3 513 SUPERFAMILY SSF111283 51 512 3.53E-127 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 CF65_01687 f9eb4035dd5944b9d1364bc4d8f6ddc3 513 Pfam PF01523 Putative modulator of DNA gyrase 65 364 8.4E-65 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CF65_01687 f9eb4035dd5944b9d1364bc4d8f6ddc3 513 Gene3D G3DSA:3.30.2290.10 44 272 1.0E-18 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal CF65_01687 f9eb4035dd5944b9d1364bc4d8f6ddc3 513 PIRSF PIRSF004919 46 513 5.6E-137 T 14-10-2018 IPR025502 TldD CF65_00312 96faed31e7e22411e89fdf07769fdd38 258 PIRSF PIRSF006241 1 258 1.5E-84 T 14-10-2018 IPR026040 Hydroxypyruvate isomerase-like CF65_00312 96faed31e7e22411e89fdf07769fdd38 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 2.6E-31 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CF65_00312 96faed31e7e22411e89fdf07769fdd38 258 SUPERFAMILY SSF51658 1 257 1.19E-79 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily CF65_00312 96faed31e7e22411e89fdf07769fdd38 258 Gene3D G3DSA:3.20.20.150 1 258 2.1E-75 T 14-10-2018 CF65_02695 a562b29669d0c4d3743fd4c96db97f54 258 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 47 156 7.9E-24 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02695 a562b29669d0c4d3743fd4c96db97f54 258 Gene3D G3DSA:3.40.50.12280 16 183 2.9E-51 T 14-10-2018 CF65_02695 a562b29669d0c4d3743fd4c96db97f54 258 SUPERFAMILY SSF56770 35 166 1.83E-49 T 14-10-2018 CF65_01252 73a0ebb4a0e972637f712d7739606811 60 SUPERFAMILY SSF64307 1 57 7.85E-16 T 14-10-2018 IPR036868 TusA-like domain superfamily CF65_01252 73a0ebb4a0e972637f712d7739606811 60 Pfam PF01206 Sulfurtransferase TusA 1 56 2.3E-14 T 14-10-2018 IPR001455 TusA-like domain CF65_01252 73a0ebb4a0e972637f712d7739606811 60 Gene3D G3DSA:3.30.110.40 1 58 4.8E-18 T 14-10-2018 IPR036868 TusA-like domain superfamily CF65_02069 e3e9c76984b396997b95f7d0b435d0e5 107 Pfam PF03831 PhnA domain 45 107 1.4E-25 T 14-10-2018 IPR013988 PhnA protein, C-terminal CF65_02069 e3e9c76984b396997b95f7d0b435d0e5 107 SUPERFAMILY SSF57783 1 37 7.94E-12 T 14-10-2018 CF65_02069 e3e9c76984b396997b95f7d0b435d0e5 107 Gene3D G3DSA:2.20.25.10 1 41 2.6E-14 T 14-10-2018 CF65_02069 e3e9c76984b396997b95f7d0b435d0e5 107 Pfam PF08274 PhnA Zinc-Ribbon 3 31 2.2E-10 T 14-10-2018 IPR013987 PhnA protein, N-terminal CF65_02069 e3e9c76984b396997b95f7d0b435d0e5 107 SUPERFAMILY SSF82057 39 107 2.24E-23 T 14-10-2018 CF65_02069 e3e9c76984b396997b95f7d0b435d0e5 107 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 107 4.3E-51 T 14-10-2018 IPR004624 PhnA protein CF65_02069 e3e9c76984b396997b95f7d0b435d0e5 107 Gene3D G3DSA:2.30.30.40 42 107 1.7E-27 T 14-10-2018 CF65_00722 f043e02c060e607fa802e09479ba3fd8 141 SMART SM00562 3 140 1.9E-84 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CF65_00722 f043e02c060e607fa802e09479ba3fd8 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.3E-57 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CF65_00722 f043e02c060e607fa802e09479ba3fd8 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CF65_00722 f043e02c060e607fa802e09479ba3fd8 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CF65_00722 f043e02c060e607fa802e09479ba3fd8 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CF65_00722 f043e02c060e607fa802e09479ba3fd8 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CF65_00722 f043e02c060e607fa802e09479ba3fd8 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CF65_00722 f043e02c060e607fa802e09479ba3fd8 141 SUPERFAMILY SSF54919 1 138 1.22E-56 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CF65_00722 f043e02c060e607fa802e09479ba3fd8 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_00722 f043e02c060e607fa802e09479ba3fd8 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.407 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CF65_00722 f043e02c060e607fa802e09479ba3fd8 141 Gene3D G3DSA:3.30.70.141 1 141 6.5E-59 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CF65_01202 a9207c8ea85984a551c8eeb69a27782a 296 Gene3D G3DSA:1.10.150.130 2 97 2.0E-19 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal CF65_01202 a9207c8ea85984a551c8eeb69a27782a 296 Pfam PF00589 Phage integrase family 111 278 4.5E-51 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CF65_01202 a9207c8ea85984a551c8eeb69a27782a 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 89 1.4E-21 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CF65_01202 a9207c8ea85984a551c8eeb69a27782a 296 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 294 1.1E-107 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 CF65_01202 a9207c8ea85984a551c8eeb69a27782a 296 SUPERFAMILY SSF47823 4 97 2.16E-10 T 14-10-2018 CF65_01202 a9207c8ea85984a551c8eeb69a27782a 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 292 54.928 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD CF65_01202 a9207c8ea85984a551c8eeb69a27782a 296 Gene3D G3DSA:1.10.443.10 110 286 3.9E-58 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CF65_01202 a9207c8ea85984a551c8eeb69a27782a 296 SUPERFAMILY SSF56349 106 290 5.89E-53 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CF65_00847 52dac939dde0dd9f82477fff1074d6f1 322 Gene3D G3DSA:1.10.150.170 117 225 3.7E-104 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 CF65_00847 52dac939dde0dd9f82477fff1074d6f1 322 Gene3D G3DSA:3.40.50.150 15 320 3.7E-104 T 14-10-2018 CF65_00847 52dac939dde0dd9f82477fff1074d6f1 322 PIRSF PIRSF004486 6 322 7.2E-102 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CF65_00847 52dac939dde0dd9f82477fff1074d6f1 322 SUPERFAMILY SSF81799 119 224 1.02E-31 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 CF65_00847 52dac939dde0dd9f82477fff1074d6f1 322 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 8 320 8.8E-131 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CF65_00847 52dac939dde0dd9f82477fff1074d6f1 322 SUPERFAMILY SSF53335 12 321 5.89E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00847 52dac939dde0dd9f82477fff1074d6f1 322 Pfam PF01795 MraW methylase family 10 321 1.4E-117 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CF65_00847 52dac939dde0dd9f82477fff1074d6f1 322 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 12 321 38.777 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CF65_01467 7a7fcd2e0a4f9b31943869584e99dcb3 278 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 7 277 6.7E-131 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CF65_01467 7a7fcd2e0a4f9b31943869584e99dcb3 278 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 7 276 2.0E-107 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CF65_01842 f04cbe6411249318e9733702feab96bc 39 Pfam PF00486 Transcriptional regulatory protein, C terminal 1 32 1.3E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CF65_01842 f04cbe6411249318e9733702feab96bc 39 Gene3D G3DSA:1.10.10.10 1 39 4.5E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01842 f04cbe6411249318e9733702feab96bc 39 SUPERFAMILY SSF46894 2 32 2.49E-9 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CF65_00954 8cb52a5f817a9321dec6ee3b7fc99f4d 248 Gene3D G3DSA:3.40.50.10090 32 165 2.0E-66 T 14-10-2018 CF65_00954 8cb52a5f817a9321dec6ee3b7fc99f4d 248 Gene3D G3DSA:3.40.50.10090 4 244 2.0E-66 T 14-10-2018 CF65_00954 8cb52a5f817a9321dec6ee3b7fc99f4d 248 SUPERFAMILY SSF69618 1 245 4.05E-53 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_00954 8cb52a5f817a9321dec6ee3b7fc99f4d 248 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 241 6.0E-43 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CF65_02153 774f65214c33b7ca7170334294fbd298 337 Gene3D G3DSA:1.10.3470.10 6 337 1.6E-102 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_02153 774f65214c33b7ca7170334294fbd298 337 SUPERFAMILY SSF81345 6 334 2.09E-82 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_02153 774f65214c33b7ca7170334294fbd298 337 Pfam PF01032 FecCD transport family 20 334 1.3E-88 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CF65_03006 a2fc95483222d3f108455e14f5bb5d30 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.25 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CF65_03006 a2fc95483222d3f108455e14f5bb5d30 226 SUPERFAMILY SSF54768 109 224 9.27E-27 T 14-10-2018 CF65_03006 a2fc95483222d3f108455e14f5bb5d30 226 Gene3D G3DSA:1.10.1520.10 2 148 6.0E-45 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CF65_03006 a2fc95483222d3f108455e14f5bb5d30 226 SMART SM00535 21 149 2.8E-57 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CF65_03006 a2fc95483222d3f108455e14f5bb5d30 226 SUPERFAMILY SSF69065 5 159 2.27E-48 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CF65_03006 a2fc95483222d3f108455e14f5bb5d30 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CF65_03006 a2fc95483222d3f108455e14f5bb5d30 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 7.1E-74 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CF65_03006 a2fc95483222d3f108455e14f5bb5d30 226 Pfam PF14622 Ribonuclease-III-like 20 140 8.4E-36 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CF65_03006 a2fc95483222d3f108455e14f5bb5d30 226 Gene3D G3DSA:3.30.160.20 154 224 1.7E-19 T 14-10-2018 CF65_03006 a2fc95483222d3f108455e14f5bb5d30 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 4.2E-15 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain CF65_03006 a2fc95483222d3f108455e14f5bb5d30 226 SMART SM00358 156 224 5.1E-22 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain CF65_00491 7cd0155c40f12d3d73ef53df49c41c00 638 Gene3D G3DSA:3.20.20.370 26 288 1.4E-78 T 14-10-2018 CF65_00491 7cd0155c40f12d3d73ef53df49c41c00 638 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 28 631 1.2E-227 T 14-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 CF65_00491 7cd0155c40f12d3d73ef53df49c41c00 638 Gene3D G3DSA:3.20.20.80 290 637 1.3E-116 T 14-10-2018 CF65_00491 7cd0155c40f12d3d73ef53df49c41c00 638 SUPERFAMILY SSF88713 48 334 2.09E-37 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CF65_00491 7cd0155c40f12d3d73ef53df49c41c00 638 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 301 611 3.3E-118 T 14-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal CF65_00491 7cd0155c40f12d3d73ef53df49c41c00 638 Pfam PF01522 Polysaccharide deacetylase 87 251 8.3E-27 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CF65_01220 fcf19b6da81e2fc55ff1c587b8efbdb1 228 SUPERFAMILY SSF53271 47 226 1.28E-34 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like CF65_01220 fcf19b6da81e2fc55ff1c587b8efbdb1 228 Gene3D G3DSA:3.40.50.2020 88 228 2.8E-16 T 14-10-2018 CF65_01303 fb6d43044b6eca94a754894b57b18a42 269 ProDom PD123385 COMPETENCE COMA A DNA TRANSFORMATION 9 251 7.0E-46 T 14-10-2018 CF65_00115 0c65d2a29f3593ab82b5d787008d123e 757 Pfam PF04262 Glutamate-cysteine ligase 6 322 9.7E-79 T 14-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CF65_00115 0c65d2a29f3593ab82b5d787008d123e 757 TIGRFAM TIGR01435 glu_cys_lig_rel: glutamate--cysteine ligase/glutathione synthase 13 753 0.0 T 14-10-2018 IPR006335 Glutathione biosynthesis bifunctional protein GshAB GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CF65_00115 0c65d2a29f3593ab82b5d787008d123e 757 Pfam PF07478 D-ala D-ala ligase C-terminus 520 592 7.0E-6 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_00115 0c65d2a29f3593ab82b5d787008d123e 757 Hamap MF_00782 Glutathione biosynthesis bifunctional protein GshAB [gshAB]. 1 757 419.29 T 14-10-2018 IPR006335 Glutathione biosynthesis bifunctional protein GshAB GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CF65_00115 0c65d2a29f3593ab82b5d787008d123e 757 Gene3D G3DSA:3.30.470.20 646 753 1.1E-8 T 14-10-2018 CF65_00115 0c65d2a29f3593ab82b5d787008d123e 757 Gene3D G3DSA:3.30.470.20 482 612 1.6E-15 T 14-10-2018 CF65_00115 0c65d2a29f3593ab82b5d787008d123e 757 Gene3D G3DSA:3.30.590.20 1 430 1.0E-154 T 14-10-2018 CF65_00115 0c65d2a29f3593ab82b5d787008d123e 757 SUPERFAMILY SSF56059 489 736 9.86E-29 T 14-10-2018 CF65_00115 0c65d2a29f3593ab82b5d787008d123e 757 SUPERFAMILY SSF55931 2 459 6.54E-139 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CF65_01137 a1f9f950930aad5beced365670352169 806 SMART SM00926 47 107 1.2E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_01137 a1f9f950930aad5beced365670352169 806 SUPERFAMILY SSF50692 633 805 2.08E-39 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CF65_01137 a1f9f950930aad5beced365670352169 806 Pfam PF01568 Molydopterin dinucleotide binding domain 687 798 3.6E-28 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CF65_01137 a1f9f950930aad5beced365670352169 806 Gene3D G3DSA:2.40.40.20 662 806 3.3E-43 T 14-10-2018 CF65_01137 a1f9f950930aad5beced365670352169 806 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 47 107 1.7E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_01137 a1f9f950930aad5beced365670352169 806 Pfam PF00384 Molybdopterin oxidoreductase 110 568 1.8E-108 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_01137 a1f9f950930aad5beced365670352169 806 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 723 750 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CF65_01137 a1f9f950930aad5beced365670352169 806 Gene3D G3DSA:3.40.50.740 412 617 1.5E-47 T 14-10-2018 CF65_01137 a1f9f950930aad5beced365670352169 806 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 7 805 0.0 T 14-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 CF65_01137 a1f9f950930aad5beced365670352169 806 Gene3D G3DSA:3.40.228.10 338 411 8.4E-18 T 14-10-2018 CF65_01137 a1f9f950930aad5beced365670352169 806 SUPERFAMILY SSF53706 48 689 2.09E-174 T 14-10-2018 CF65_01137 a1f9f950930aad5beced365670352169 806 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 509 526 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CF65_01137 a1f9f950930aad5beced365670352169 806 Gene3D G3DSA:3.40.50.740 38 314 1.0E-87 T 14-10-2018 CF65_01137 a1f9f950930aad5beced365670352169 806 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 52 71 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CF65_00362 668c4f5d749403023bea68d1e8c9fd54 235 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00362 668c4f5d749403023bea68d1e8c9fd54 235 SUPERFAMILY SSF54821 107 206 1.29E-41 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00362 668c4f5d749403023bea68d1e8c9fd54 235 SUPERFAMILY SSF54814 2 106 2.59E-37 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CF65_00362 668c4f5d749403023bea68d1e8c9fd54 235 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.548 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CF65_00362 668c4f5d749403023bea68d1e8c9fd54 235 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 3.1E-42 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00362 668c4f5d749403023bea68d1e8c9fd54 235 SMART SM00322 60 125 2.1E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 CF65_00362 668c4f5d749403023bea68d1e8c9fd54 235 Pfam PF07650 KH domain 38 111 7.2E-20 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00362 668c4f5d749403023bea68d1e8c9fd54 235 Gene3D G3DSA:3.30.1140.32 108 208 2.7E-46 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00362 668c4f5d749403023bea68d1e8c9fd54 235 Gene3D G3DSA:3.30.300.20 17 107 2.2E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta CF65_00362 668c4f5d749403023bea68d1e8c9fd54 235 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.2E-101 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CF65_00576 1318d439f0bb1e392d2edeea08e95073 183 SUPERFAMILY SSF55821 3 180 2.08E-47 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CF65_00576 1318d439f0bb1e392d2edeea08e95073 183 Pfam PF01300 Telomere recombination 9 183 1.4E-35 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 CF65_00576 1318d439f0bb1e392d2edeea08e95073 183 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 181 35.763 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 CF65_00576 1318d439f0bb1e392d2edeea08e95073 183 Gene3D G3DSA:3.90.870.10 1 181 7.6E-52 T 14-10-2018 CF65_00160 de469333c07eabb9b79accdf58dd7e3a 173 Pfam PF07963 Prokaryotic N-terminal methylation motif 37 59 4.3E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site CF65_00160 de469333c07eabb9b79accdf58dd7e3a 173 SUPERFAMILY SSF54523 61 172 1.2E-25 T 14-10-2018 CF65_00160 de469333c07eabb9b79accdf58dd7e3a 173 Gene3D G3DSA:3.30.700.10 40 168 1.6E-28 T 14-10-2018 CF65_00160 de469333c07eabb9b79accdf58dd7e3a 173 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 37 60 5.0E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site CF65_00160 de469333c07eabb9b79accdf58dd7e3a 173 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 38 58 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site CF65_02613 8517c42867f5ff707612df7f41812333 246 SUPERFAMILY SSF56112 10 218 4.63E-20 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily CF65_02613 8517c42867f5ff707612df7f41812333 246 Gene3D G3DSA:1.10.510.10 100 212 1.7E-8 T 14-10-2018 CF65_02613 8517c42867f5ff707612df7f41812333 246 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 51 191 1.4E-8 T 14-10-2018 CF65_01050 1c65107d4de08e218b1a881ab089d8f8 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 332 493 3.6E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01050 1c65107d4de08e218b1a881ab089d8f8 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 233 1.0E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01050 1c65107d4de08e218b1a881ab089d8f8 506 SUPERFAMILY SSF161098 267 503 3.92E-37 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01050 1c65107d4de08e218b1a881ab089d8f8 506 Gene3D G3DSA:1.10.3720.10 4 246 3.4E-44 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01050 1c65107d4de08e218b1a881ab089d8f8 506 Gene3D G3DSA:1.10.3720.10 264 505 7.3E-36 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01050 1c65107d4de08e218b1a881ab089d8f8 506 SUPERFAMILY SSF161098 3 249 1.15E-40 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01407 5f1e30302dc8b8b94358b06458c2706a 389 Pfam PF01551 Peptidase family M23 289 382 1.8E-29 T 14-10-2018 IPR016047 Peptidase M23 CF65_01407 5f1e30302dc8b8b94358b06458c2706a 389 SMART SM00257 145 189 4.6E-12 T 14-10-2018 IPR018392 LysM domain CF65_01407 5f1e30302dc8b8b94358b06458c2706a 389 Gene3D G3DSA:3.10.350.10 139 202 3.0E-12 T 14-10-2018 IPR036779 LysM domain superfamily CF65_01407 5f1e30302dc8b8b94358b06458c2706a 389 SUPERFAMILY SSF51261 145 386 1.1E-51 T 14-10-2018 IPR011055 Duplicated hybrid motif CF65_01407 5f1e30302dc8b8b94358b06458c2706a 389 Pfam PF01476 LysM domain 146 188 2.0E-10 T 14-10-2018 IPR018392 LysM domain CF65_01407 5f1e30302dc8b8b94358b06458c2706a 389 Gene3D G3DSA:2.70.70.10 254 387 2.2E-36 T 14-10-2018 IPR011055 Duplicated hybrid motif CF65_01070 2ee4f06e0dba49a703709358d7f5845f 228 Pfam PF11967 Recombination protein O N terminal 1 68 2.0E-20 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal CF65_01070 2ee4f06e0dba49a703709358d7f5845f 228 Hamap MF_00201 DNA repair protein RecO [recO]. 1 223 20.802 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CF65_01070 2ee4f06e0dba49a703709358d7f5845f 228 TIGRFAM TIGR00613 reco: DNA repair protein RecO 1 222 3.3E-45 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CF65_01070 2ee4f06e0dba49a703709358d7f5845f 228 Pfam PF02565 Recombination protein O C terminal 77 218 3.7E-24 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CF65_01070 2ee4f06e0dba49a703709358d7f5845f 228 Gene3D G3DSA:1.20.1440.120 71 227 1.0E-54 T 14-10-2018 CF65_01070 2ee4f06e0dba49a703709358d7f5845f 228 Gene3D G3DSA:2.40.50.140 1 70 6.8E-29 T 14-10-2018 CF65_01070 2ee4f06e0dba49a703709358d7f5845f 228 SUPERFAMILY SSF50249 1 67 2.57E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01070 2ee4f06e0dba49a703709358d7f5845f 228 SUPERFAMILY SSF57863 78 150 2.59E-10 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger CF65_01173 16dd09dcc4bc4ff19bfc9cf4e51bf074 152 Pfam PF09827 CRISPR associated protein Cas2 3 90 6.2E-12 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 CF65_01173 16dd09dcc4bc4ff19bfc9cf4e51bf074 152 Gene3D G3DSA:3.30.70.240 2 104 1.5E-19 T 14-10-2018 CF65_00305 8ada66e4da3421c3ba8208ae164262c0 347 Gene3D G3DSA:3.30.160.60 309 347 1.2E-18 T 14-10-2018 CF65_00305 8ada66e4da3421c3ba8208ae164262c0 347 Gene3D G3DSA:3.30.160.60 72 109 1.6E-15 T 14-10-2018 CF65_00305 8ada66e4da3421c3ba8208ae164262c0 347 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 343 2.8E-139 T 14-10-2018 IPR003770 Endolytic murein transglycosylase CF65_00305 8ada66e4da3421c3ba8208ae164262c0 347 Pfam PF02618 YceG-like family 42 336 5.9E-85 T 14-10-2018 IPR003770 Endolytic murein transglycosylase CF65_00305 8ada66e4da3421c3ba8208ae164262c0 347 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 6 339 33.969 T 14-10-2018 IPR003770 Endolytic murein transglycosylase CF65_02363 71b577f08860ac6d2741aeb8266d76ac 417 Pfam PF12221 Bacterial membrane protein N terminal 1 65 1.0E-4 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal CF65_02363 71b577f08860ac6d2741aeb8266d76ac 417 Gene3D G3DSA:3.30.479.30 129 262 1.4E-19 T 14-10-2018 CF65_02363 71b577f08860ac6d2741aeb8266d76ac 417 SUPERFAMILY SSF117892 133 265 4.45E-23 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily CF65_02363 71b577f08860ac6d2741aeb8266d76ac 417 TIGRFAM TIGR01933 hflK: HflK protein 102 362 8.1E-120 T 14-10-2018 IPR010201 HflK GO:0016021 CF65_02363 71b577f08860ac6d2741aeb8266d76ac 417 Pfam PF01145 SPFH domain / Band 7 family 104 275 6.5E-29 T 14-10-2018 IPR001107 Band 7 domain CF65_02363 71b577f08860ac6d2741aeb8266d76ac 417 PRINTS PR00721 Stomatin signature 107 129 1.1E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 CF65_02363 71b577f08860ac6d2741aeb8266d76ac 417 PRINTS PR00721 Stomatin signature 154 175 1.1E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 CF65_02363 71b577f08860ac6d2741aeb8266d76ac 417 PRINTS PR00721 Stomatin signature 189 206 1.1E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 CF65_02363 71b577f08860ac6d2741aeb8266d76ac 417 SMART SM00244 100 260 1.7E-47 T 14-10-2018 IPR001107 Band 7 domain CF65_00474 69bf8228b78bd872d6710ba9b440a73f 490 SMART SM00963 189 269 1.4E-21 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CF65_00474 69bf8228b78bd872d6710ba9b440a73f 490 SMART SM00962 284 485 1.3E-123 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CF65_00474 69bf8228b78bd872d6710ba9b440a73f 490 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 458 471 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CF65_00474 69bf8228b78bd872d6710ba9b440a73f 490 Pfam PF02881 SRP54-type protein, helical bundle domain 202 264 5.0E-11 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CF65_00474 69bf8228b78bd872d6710ba9b440a73f 490 SUPERFAMILY SSF47364 184 262 5.5E-21 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 CF65_00474 69bf8228b78bd872d6710ba9b440a73f 490 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 212 484 2.4E-115 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CF65_00474 69bf8228b78bd872d6710ba9b440a73f 490 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 212 485 62.319 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CF65_00474 69bf8228b78bd872d6710ba9b440a73f 490 SUPERFAMILY SSF52540 282 484 6.1E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00474 69bf8228b78bd872d6710ba9b440a73f 490 Gene3D G3DSA:3.40.50.300 284 473 7.0E-116 T 14-10-2018 CF65_00474 69bf8228b78bd872d6710ba9b440a73f 490 Gene3D G3DSA:1.20.120.140 186 483 7.0E-116 T 14-10-2018 CF65_00474 69bf8228b78bd872d6710ba9b440a73f 490 Pfam PF00448 SRP54-type protein, GTPase domain 285 484 1.9E-77 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CF65_00474 69bf8228b78bd872d6710ba9b440a73f 490 SMART SM00382 283 463 3.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02313 15482db471a38247c0be9a08b4decf79 97 Pfam PF03658 RnfH family Ubiquitin 5 87 1.7E-32 T 14-10-2018 IPR005346 RnfH protein CF65_02313 15482db471a38247c0be9a08b4decf79 97 SUPERFAMILY SSF54285 4 79 1.14E-24 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CF65_02313 15482db471a38247c0be9a08b4decf79 97 Gene3D G3DSA:3.10.20.280 1 89 5.8E-34 T 14-10-2018 IPR037021 RnfH superfamily CF65_02313 15482db471a38247c0be9a08b4decf79 97 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 24.287 T 14-10-2018 IPR005346 RnfH protein CF65_01644 cb54a816948c8d2a23ccd508ed75d8a2 677 SUPERFAMILY SSF161098 421 658 4.21E-40 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01644 cb54a816948c8d2a23ccd508ed75d8a2 677 SUPERFAMILY SSF161098 139 382 9.81E-44 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01644 cb54a816948c8d2a23ccd508ed75d8a2 677 Gene3D G3DSA:1.10.3720.10 409 671 1.0E-39 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01644 cb54a816948c8d2a23ccd508ed75d8a2 677 Gene3D G3DSA:1.10.3720.10 126 395 1.3E-49 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01644 cb54a816948c8d2a23ccd508ed75d8a2 677 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 487 670 9.4E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01644 cb54a816948c8d2a23ccd508ed75d8a2 677 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 194 385 8.7E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 4.7E-83 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 395 1.1E-134 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.243 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.8E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.8E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.8E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.8E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 Pfam PF01479 S4 domain 336 377 8.2E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 SUPERFAMILY SSF52374 5 315 2.09E-97 T 14-10-2018 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 SUPERFAMILY SSF55174 297 394 1.57E-19 T 14-10-2018 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 Gene3D G3DSA:3.40.50.620 6 217 4.4E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01936 0794ad88a627919e17911bc3cf89b462 395 SMART SM00363 334 395 9.9E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 Gene3D G3DSA:1.10.240.10 218 326 5.3E-33 T 14-10-2018 CF65_01936 0794ad88a627919e17911bc3cf89b462 395 Gene3D G3DSA:3.10.290.10 327 394 5.0E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CF65_01394 055e9c3472cd25f3e5f965e33cc38258 277 Pfam PF12852 Cupin 12 155 1.7E-23 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain CF65_01394 055e9c3472cd25f3e5f965e33cc38258 277 Gene3D G3DSA:1.10.10.60 232 276 1.3E-17 T 14-10-2018 CF65_01394 055e9c3472cd25f3e5f965e33cc38258 277 SUPERFAMILY SSF46689 172 223 3.85E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01394 055e9c3472cd25f3e5f965e33cc38258 277 SMART SM00342 189 272 9.4E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CF65_01394 055e9c3472cd25f3e5f965e33cc38258 277 Pfam PF12833 Helix-turn-helix domain 195 274 6.0E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CF65_01394 055e9c3472cd25f3e5f965e33cc38258 277 SUPERFAMILY SSF46689 225 274 3.67E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01394 055e9c3472cd25f3e5f965e33cc38258 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 1.2E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CF65_01394 055e9c3472cd25f3e5f965e33cc38258 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 1.2E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CF65_01394 055e9c3472cd25f3e5f965e33cc38258 277 Gene3D G3DSA:1.10.10.60 177 231 2.0E-9 T 14-10-2018 CF65_01394 055e9c3472cd25f3e5f965e33cc38258 277 SUPERFAMILY SSF51182 12 85 9.78E-5 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily CF65_01621 80b63a70c07ea2f0edb7ceae3cb70cb1 468 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 3.0E-34 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CF65_01621 80b63a70c07ea2f0edb7ceae3cb70cb1 468 SUPERFAMILY SSF48024 18 129 4.84E-36 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 CF65_01621 80b63a70c07ea2f0edb7ceae3cb70cb1 468 SUPERFAMILY SSF52540 198 450 1.06E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01621 80b63a70c07ea2f0edb7ceae3cb70cb1 468 SMART SM00382 217 424 9.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01621 80b63a70c07ea2f0edb7ceae3cb70cb1 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 459 4.0E-175 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CF65_01621 80b63a70c07ea2f0edb7ceae3cb70cb1 468 Gene3D G3DSA:1.10.860.10 12 162 1.3E-50 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CF65_01621 80b63a70c07ea2f0edb7ceae3cb70cb1 468 Gene3D G3DSA:3.40.50.300 175 464 4.5E-106 T 14-10-2018 CF65_01621 80b63a70c07ea2f0edb7ceae3cb70cb1 468 Pfam PF03796 DnaB-like helicase C terminal domain 200 457 1.1E-111 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CF65_00292 c79d06ccf0d7a4f3c8c99995ca1abba9 153 PRINTS PR00070 Dihydrofolate reductase signature 6 16 2.6E-14 T 14-10-2018 CF65_00292 c79d06ccf0d7a4f3c8c99995ca1abba9 153 PRINTS PR00070 Dihydrofolate reductase signature 33 44 2.6E-14 T 14-10-2018 CF65_00292 c79d06ccf0d7a4f3c8c99995ca1abba9 153 PRINTS PR00070 Dihydrofolate reductase signature 20 28 2.6E-14 T 14-10-2018 CF65_00292 c79d06ccf0d7a4f3c8c99995ca1abba9 153 PRINTS PR00070 Dihydrofolate reductase signature 83 97 2.6E-14 T 14-10-2018 CF65_00292 c79d06ccf0d7a4f3c8c99995ca1abba9 153 PIRSF PIRSF000194 1 153 5.7E-54 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 CF65_00292 c79d06ccf0d7a4f3c8c99995ca1abba9 153 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 6 28 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CF65_00292 c79d06ccf0d7a4f3c8c99995ca1abba9 153 SUPERFAMILY SSF53597 1 152 1.19E-54 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CF65_00292 c79d06ccf0d7a4f3c8c99995ca1abba9 153 Gene3D G3DSA:3.40.430.10 1 153 4.3E-55 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CF65_00292 c79d06ccf0d7a4f3c8c99995ca1abba9 153 Pfam PF00186 Dihydrofolate reductase 1 151 1.9E-57 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CF65_00830 4cd751d0e2870c344085a8bf639437ca 426 Gene3D G3DSA:3.30.1490.110 87 169 6.2E-103 T 14-10-2018 CF65_00830 4cd751d0e2870c344085a8bf639437ca 426 Gene3D G3DSA:3.90.640.10 235 301 6.2E-103 T 14-10-2018 CF65_00830 4cd751d0e2870c344085a8bf639437ca 426 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 4.1E-25 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CF65_00830 4cd751d0e2870c344085a8bf639437ca 426 Pfam PF14450 Cell division protein FtsA 207 384 8.6E-22 T 14-10-2018 CF65_00830 4cd751d0e2870c344085a8bf639437ca 426 SMART SM00842 10 196 1.4E-89 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CF65_00830 4cd751d0e2870c344085a8bf639437ca 426 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 426 27.279 T 14-10-2018 IPR020823 Cell division protein FtsA CF65_00830 4cd751d0e2870c344085a8bf639437ca 426 Gene3D G3DSA:3.30.420.40 13 382 6.2E-103 T 14-10-2018 CF65_00830 4cd751d0e2870c344085a8bf639437ca 426 SUPERFAMILY SSF53067 9 197 4.86E-53 T 14-10-2018 CF65_00830 4cd751d0e2870c344085a8bf639437ca 426 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 10 388 1.5E-145 T 14-10-2018 IPR020823 Cell division protein FtsA CF65_00830 4cd751d0e2870c344085a8bf639437ca 426 Gene3D G3DSA:3.30.420.40 197 362 6.2E-103 T 14-10-2018 CF65_00830 4cd751d0e2870c344085a8bf639437ca 426 PIRSF PIRSF003101 1 426 7.1E-138 T 14-10-2018 IPR020823 Cell division protein FtsA CF65_00830 4cd751d0e2870c344085a8bf639437ca 426 SUPERFAMILY SSF53067 198 387 1.14E-40 T 14-10-2018 CF65_01824 f24dd869a8023b5d0ac9cd6cac11ba4e 252 SUPERFAMILY SSF52540 2 227 1.89E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01824 f24dd869a8023b5d0ac9cd6cac11ba4e 252 Pfam PF00005 ABC transporter 17 164 2.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01824 f24dd869a8023b5d0ac9cd6cac11ba4e 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01824 f24dd869a8023b5d0ac9cd6cac11ba4e 252 Gene3D G3DSA:3.40.50.300 1 251 2.5E-65 T 14-10-2018 CF65_01824 f24dd869a8023b5d0ac9cd6cac11ba4e 252 SMART SM00382 26 213 2.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 585 33.062 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 SUPERFAMILY SSF55681 109 585 2.3E-103 T 14-10-2018 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 Pfam PF01336 OB-fold nucleic acid binding domain 20 102 2.4E-13 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 Pfam PF02938 GAD domain 308 407 4.9E-32 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 3.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 3.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 3.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 3.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 559 3.7E-105 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 1.5E-277 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 Gene3D G3DSA:2.40.50.140 1 106 1.8E-32 T 14-10-2018 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 SUPERFAMILY SSF50249 2 106 4.38E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 Gene3D G3DSA:3.30.930.10 119 579 2.6E-195 T 14-10-2018 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 SUPERFAMILY SSF55261 289 420 2.45E-46 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CF65_02856 9ea2240228a402066be2fa484ae42f9e 592 Gene3D G3DSA:3.30.1360.30 272 421 2.6E-195 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CF65_02550 0b86a0dbb8b136675007c66f67885ffb 296 SMART SM00382 33 249 7.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02550 0b86a0dbb8b136675007c66f67885ffb 296 SUPERFAMILY SSF52540 8 224 9.48E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02550 0b86a0dbb8b136675007c66f67885ffb 296 Pfam PF00005 ABC transporter 25 171 1.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02550 0b86a0dbb8b136675007c66f67885ffb 296 Gene3D G3DSA:3.40.50.300 6 245 2.8E-62 T 14-10-2018 CF65_02550 0b86a0dbb8b136675007c66f67885ffb 296 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01351 dff79ecf787f797a0c6f2798fd46e8ba 657 Pfam PF00884 Sulfatase 289 559 2.8E-43 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CF65_01351 dff79ecf787f797a0c6f2798fd46e8ba 657 SUPERFAMILY SSF53649 287 614 1.7E-63 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CF65_01351 dff79ecf787f797a0c6f2798fd46e8ba 657 Gene3D G3DSA:3.30.1120.80 279 645 1.4E-137 T 14-10-2018 CF65_01351 dff79ecf787f797a0c6f2798fd46e8ba 657 PIRSF PIRSF005091 5 650 4.0E-124 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like CF65_01351 dff79ecf787f797a0c6f2798fd46e8ba 657 Gene3D G3DSA:3.40.720.10 280 566 1.4E-137 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CF65_01109 a887a1e9901a976ff52ae87d7eab876b 249 Pfam PF00106 short chain dehydrogenase 7 200 2.3E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01109 a887a1e9901a976ff52ae87d7eab876b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01109 a887a1e9901a976ff52ae87d7eab876b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01109 a887a1e9901a976ff52ae87d7eab876b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01109 a887a1e9901a976ff52ae87d7eab876b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01109 a887a1e9901a976ff52ae87d7eab876b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01109 a887a1e9901a976ff52ae87d7eab876b 249 Gene3D G3DSA:3.40.50.720 1 243 1.1E-61 T 14-10-2018 CF65_01109 a887a1e9901a976ff52ae87d7eab876b 249 SUPERFAMILY SSF51735 1 234 6.24E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01109 a887a1e9901a976ff52ae87d7eab876b 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 0.0082 T 14-10-2018 CF65_01109 a887a1e9901a976ff52ae87d7eab876b 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CF65_02693 d3d0013ee0b060472da06cb7eab81409 215 SUPERFAMILY SSF54862 18 119 5.02E-22 T 14-10-2018 CF65_02693 d3d0013ee0b060472da06cb7eab81409 215 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02693 d3d0013ee0b060472da06cb7eab81409 215 Pfam PF12838 4Fe-4S dicluster domain 39 89 3.7E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02693 d3d0013ee0b060472da06cb7eab81409 215 Gene3D G3DSA:3.30.70.3270 18 140 1.4E-24 T 14-10-2018 CF65_02693 d3d0013ee0b060472da06cb7eab81409 215 PIRSF PIRSF005658 10 124 3.6E-13 T 14-10-2018 CF65_02693 d3d0013ee0b060472da06cb7eab81409 215 PIRSF PIRSF005658 68 212 1.2E-7 T 14-10-2018 CF65_02693 d3d0013ee0b060472da06cb7eab81409 215 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_00416 0265116f8a5f2432eedd1e7dcdfa3ce2 225 SUPERFAMILY SSF161098 14 210 1.31E-48 T 14-10-2018 IPR035906 MetI-like superfamily CF65_00416 0265116f8a5f2432eedd1e7dcdfa3ce2 225 Gene3D G3DSA:1.10.3720.10 10 224 2.3E-49 T 14-10-2018 IPR035906 MetI-like superfamily CF65_00416 0265116f8a5f2432eedd1e7dcdfa3ce2 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 222 3.6E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01509 595a295bc0ae76d76842d7454184cd33 581 Pfam PF00664 ABC transporter transmembrane region 27 286 7.7E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CF65_01509 595a295bc0ae76d76842d7454184cd33 581 SUPERFAMILY SSF90123 4 318 3.14E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_01509 595a295bc0ae76d76842d7454184cd33 581 SUPERFAMILY SSF52540 329 568 1.41E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01509 595a295bc0ae76d76842d7454184cd33 581 Pfam PF00005 ABC transporter 351 498 5.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01509 595a295bc0ae76d76842d7454184cd33 581 Gene3D G3DSA:3.40.50.300 326 578 3.6E-78 T 14-10-2018 CF65_01509 595a295bc0ae76d76842d7454184cd33 581 Gene3D G3DSA:1.20.1560.10 3 321 1.1E-42 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_01509 595a295bc0ae76d76842d7454184cd33 581 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01509 595a295bc0ae76d76842d7454184cd33 581 SMART SM00382 359 543 2.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02047 87398a376e47a752d9afaedffc3e34ce 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CF65_02047 87398a376e47a752d9afaedffc3e34ce 347 Pfam PF00107 Zinc-binding dehydrogenase 172 296 4.9E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CF65_02047 87398a376e47a752d9afaedffc3e34ce 347 SUPERFAMILY SSF51735 142 314 1.55E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02047 87398a376e47a752d9afaedffc3e34ce 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 131 2.1E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CF65_02047 87398a376e47a752d9afaedffc3e34ce 347 Gene3D G3DSA:3.40.50.720 149 286 3.3E-104 T 14-10-2018 CF65_02047 87398a376e47a752d9afaedffc3e34ce 347 SUPERFAMILY SSF50129 1 170 8.67E-48 T 14-10-2018 IPR011032 GroES-like superfamily CF65_02047 87398a376e47a752d9afaedffc3e34ce 347 Gene3D G3DSA:3.90.180.10 20 319 3.3E-104 T 14-10-2018 CF65_02034 b446ef615fe0aab81d24271fb869a68d 259 PRINTS PR00410 Phenol hydroxylase reductase family signature 117 136 2.1E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CF65_02034 b446ef615fe0aab81d24271fb869a68d 259 PRINTS PR00410 Phenol hydroxylase reductase family signature 38 50 2.1E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CF65_02034 b446ef615fe0aab81d24271fb869a68d 259 PRINTS PR00410 Phenol hydroxylase reductase family signature 220 228 2.1E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CF65_02034 b446ef615fe0aab81d24271fb869a68d 259 Pfam PF00175 Oxidoreductase NAD-binding domain 118 232 3.6E-11 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CF65_02034 b446ef615fe0aab81d24271fb869a68d 259 Gene3D G3DSA:3.40.50.80 103 259 1.6E-40 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CF65_02034 b446ef615fe0aab81d24271fb869a68d 259 SUPERFAMILY SSF63380 10 106 2.15E-20 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CF65_02034 b446ef615fe0aab81d24271fb869a68d 259 Gene3D G3DSA:2.40.30.10 2 102 2.2E-25 T 14-10-2018 CF65_02034 b446ef615fe0aab81d24271fb869a68d 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 220 228 5.1E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CF65_02034 b446ef615fe0aab81d24271fb869a68d 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 117 136 5.1E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CF65_02034 b446ef615fe0aab81d24271fb869a68d 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 57 64 5.1E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CF65_02034 b446ef615fe0aab81d24271fb869a68d 259 SUPERFAMILY SSF52343 110 251 1.44E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CF65_02034 b446ef615fe0aab81d24271fb869a68d 259 Pfam PF00970 Oxidoreductase FAD-binding domain 24 98 1.2E-7 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CF65_00344 7568fbf12f02262b6a855f1be06a5904 136 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 79 131 1.5E-18 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CF65_00344 7568fbf12f02262b6a855f1be06a5904 136 Gene3D G3DSA:1.20.5.1030 75 132 1.2E-16 T 14-10-2018 IPR038379 SecE superfamily CF65_00344 7568fbf12f02262b6a855f1be06a5904 136 PRINTS PR01650 Bacterial translocase SecE signature 118 134 3.8E-32 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CF65_00344 7568fbf12f02262b6a855f1be06a5904 136 PRINTS PR01650 Bacterial translocase SecE signature 53 74 3.8E-32 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CF65_00344 7568fbf12f02262b6a855f1be06a5904 136 PRINTS PR01650 Bacterial translocase SecE signature 98 118 3.8E-32 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CF65_00344 7568fbf12f02262b6a855f1be06a5904 136 PRINTS PR01650 Bacterial translocase SecE signature 74 94 3.8E-32 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CF65_00344 7568fbf12f02262b6a855f1be06a5904 136 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 80 108 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CF65_00344 7568fbf12f02262b6a855f1be06a5904 136 Hamap MF_00422 Protein translocase subunit SecE [secE]. 75 130 12.428 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CF65_00344 7568fbf12f02262b6a855f1be06a5904 136 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 79 131 2.1E-18 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CF65_02832 b81e4cb11133a70a689958ce9720d0e1 402 Gene3D G3DSA:3.30.1150.10 310 401 6.0E-17 T 14-10-2018 CF65_02832 b81e4cb11133a70a689958ce9720d0e1 402 Pfam PF06519 TolA C-terminal 302 396 3.6E-21 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 CF65_02832 b81e4cb11133a70a689958ce9720d0e1 402 TIGRFAM TIGR02794 tolA_full: protein TolA 12 398 5.3E-90 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 CF65_02832 b81e4cb11133a70a689958ce9720d0e1 402 SUPERFAMILY SSF74653 311 399 2.75E-15 T 14-10-2018 CF65_02866 6c8b82ab378345f2255ecf479f1f5b44 135 SUPERFAMILY SSF54593 1 128 6.44E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CF65_02866 6c8b82ab378345f2255ecf479f1f5b44 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CF65_02866 6c8b82ab378345f2255ecf479f1f5b44 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 6.3E-24 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CF65_02866 6c8b82ab378345f2255ecf479f1f5b44 135 Gene3D G3DSA:3.10.180.10 1 132 7.5E-50 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CF65_02866 6c8b82ab378345f2255ecf479f1f5b44 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CF65_02866 6c8b82ab378345f2255ecf479f1f5b44 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 5.3E-68 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CF65_00837 d6c9db8369d4337a0e40db9ece35b58f 396 Pfam PF01098 Cell cycle protein 27 384 5.9E-125 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00837 d6c9db8369d4337a0e40db9ece35b58f 396 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 23 391 39.374 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00837 d6c9db8369d4337a0e40db9ece35b58f 396 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 25 382 1.7E-129 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00837 d6c9db8369d4337a0e40db9ece35b58f 396 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 341 365 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00231 a7b39290fadf3821582242f43bf0ae43 595 SUPERFAMILY SSF56801 6 595 2.75E-109 T 14-10-2018 CF65_00231 a7b39290fadf3821582242f43bf0ae43 595 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 14-10-2018 IPR020845 AMP-binding, conserved site CF65_00231 a7b39290fadf3821582242f43bf0ae43 595 Gene3D G3DSA:3.40.50.12780 1 328 1.2E-50 T 14-10-2018 CF65_00231 a7b39290fadf3821582242f43bf0ae43 595 Pfam PF00501 AMP-binding enzyme 12 465 6.3E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CF65_00231 a7b39290fadf3821582242f43bf0ae43 595 Gene3D G3DSA:3.40.50.12780 332 458 7.4E-32 T 14-10-2018 CF65_02285 27c3f45595cf5be708b8884ac9705829 416 Gene3D G3DSA:3.40.190.10 131 251 8.9E-29 T 14-10-2018 CF65_02285 27c3f45595cf5be708b8884ac9705829 416 SUPERFAMILY SSF53850 30 327 9.06E-37 T 14-10-2018 CF65_02285 27c3f45595cf5be708b8884ac9705829 416 Pfam PF13343 Bacterial extracellular solute-binding protein 77 297 1.2E-21 T 14-10-2018 CF65_02285 27c3f45595cf5be708b8884ac9705829 416 Gene3D G3DSA:3.40.190.10 40 297 8.9E-29 T 14-10-2018 CF65_00634 39889e44edd267946f6bada1f6386f24 190 SUPERFAMILY SSF100879 79 189 8.44E-21 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CF65_00634 39889e44edd267946f6bada1f6386f24 190 Pfam PF11799 impB/mucB/samB family C-terminal domain 71 184 2.5E-8 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CF65_00634 39889e44edd267946f6bada1f6386f24 190 SUPERFAMILY SSF56672 1 73 2.67E-16 T 14-10-2018 CF65_00634 39889e44edd267946f6bada1f6386f24 190 Gene3D G3DSA:3.30.1490.100 75 190 2.0E-26 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CF65_00634 39889e44edd267946f6bada1f6386f24 190 Gene3D G3DSA:1.10.150.20 3 66 6.3E-19 T 14-10-2018 CF65_00634 39889e44edd267946f6bada1f6386f24 190 Pfam PF11798 IMS family HHH motif 4 34 8.1E-8 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CF65_01069 6ced74a20fa7fbe9a6b262cd36b1dfd1 282 Gene3D G3DSA:1.10.286.20 187 226 5.3E-24 T 14-10-2018 CF65_01069 6ced74a20fa7fbe9a6b262cd36b1dfd1 282 Gene3D G3DSA:3.30.479.20 57 141 6.8E-29 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CF65_01069 6ced74a20fa7fbe9a6b262cd36b1dfd1 282 SUPERFAMILY SSF54713 141 280 9.25E-53 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CF65_01069 6ced74a20fa7fbe9a6b262cd36b1dfd1 282 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CF65_01069 6ced74a20fa7fbe9a6b262cd36b1dfd1 282 Gene3D G3DSA:1.10.8.10 1 56 1.5E-27 T 14-10-2018 CF65_01069 6ced74a20fa7fbe9a6b262cd36b1dfd1 282 SUPERFAMILY SSF54713 56 139 7.36E-22 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CF65_01069 6ced74a20fa7fbe9a6b262cd36b1dfd1 282 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 80.489 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CF65_01069 6ced74a20fa7fbe9a6b262cd36b1dfd1 282 SUPERFAMILY SSF46934 3 56 4.98E-19 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 CF65_01069 6ced74a20fa7fbe9a6b262cd36b1dfd1 282 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 281 3.3E-118 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CF65_01069 6ced74a20fa7fbe9a6b262cd36b1dfd1 282 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CF65_01069 6ced74a20fa7fbe9a6b262cd36b1dfd1 282 Pfam PF00889 Elongation factor TS 71 263 1.7E-66 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 CF65_02326 5261f3fcd5abfdea65580548546fcdb9 169 Pfam PF02470 MlaD protein 40 116 6.7E-22 T 14-10-2018 IPR003399 Mce/MlaD CF65_02326 5261f3fcd5abfdea65580548546fcdb9 169 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 5 151 1.6E-56 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 CF65_00136 96932a8944f691771c4fd8122b1536ef 460 Pfam PF00939 Sodium:sulfate symporter transmembrane region 11 459 1.2E-56 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CF65_00136 96932a8944f691771c4fd8122b1536ef 460 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 460 4.1E-127 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CF65_00136 96932a8944f691771c4fd8122b1536ef 460 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 411 427 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CF65_01378 e0af5de7323cfc16a1a07a4d19a81c54 480 Gene3D G3DSA:1.20.1250.20 253 474 4.9E-56 T 14-10-2018 CF65_01378 e0af5de7323cfc16a1a07a4d19a81c54 480 ProSitePatterns PS00942 glpT family of transporters signature. 154 170 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 CF65_01378 e0af5de7323cfc16a1a07a4d19a81c54 480 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 468 3.5E-255 T 14-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 CF65_01378 e0af5de7323cfc16a1a07a4d19a81c54 480 PIRSF PIRSF002808 5 477 2.9E-140 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CF65_01378 e0af5de7323cfc16a1a07a4d19a81c54 480 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 445 2.3E-131 T 14-10-2018 CF65_01378 e0af5de7323cfc16a1a07a4d19a81c54 480 Gene3D G3DSA:1.20.1250.20 18 238 6.2E-49 T 14-10-2018 CF65_01378 e0af5de7323cfc16a1a07a4d19a81c54 480 SUPERFAMILY SSF103473 15 465 2.62E-72 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_01378 e0af5de7323cfc16a1a07a4d19a81c54 480 Pfam PF07690 Major Facilitator Superfamily 34 427 1.3E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CF65_00119 357c63b79e43dab4cf7ca5d2620c90b8 188 Pfam PF00574 Clp protease 7 187 7.4E-89 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CF65_00119 357c63b79e43dab4cf7ca5d2620c90b8 188 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 188 42.621 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CF65_00119 357c63b79e43dab4cf7ca5d2620c90b8 188 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 107 120 - T 14-10-2018 IPR033135 ClpP, histidine active site CF65_00119 357c63b79e43dab4cf7ca5d2620c90b8 188 PRINTS PR00127 Clp protease catalytic subunit P signature 163 182 4.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CF65_00119 357c63b79e43dab4cf7ca5d2620c90b8 188 PRINTS PR00127 Clp protease catalytic subunit P signature 106 125 4.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CF65_00119 357c63b79e43dab4cf7ca5d2620c90b8 188 PRINTS PR00127 Clp protease catalytic subunit P signature 14 29 4.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CF65_00119 357c63b79e43dab4cf7ca5d2620c90b8 188 PRINTS PR00127 Clp protease catalytic subunit P signature 54 74 4.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CF65_00119 357c63b79e43dab4cf7ca5d2620c90b8 188 PRINTS PR00127 Clp protease catalytic subunit P signature 85 102 4.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CF65_00119 357c63b79e43dab4cf7ca5d2620c90b8 188 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 187 2.3E-106 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CF65_00119 357c63b79e43dab4cf7ca5d2620c90b8 188 Gene3D G3DSA:3.90.226.10 1 188 3.3E-81 T 14-10-2018 CF65_00119 357c63b79e43dab4cf7ca5d2620c90b8 188 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 85 96 - T 14-10-2018 IPR018215 ClpP, Ser active site CF65_00119 357c63b79e43dab4cf7ca5d2620c90b8 188 SUPERFAMILY SSF52096 5 186 1.14E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 3.9E-114 T 14-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 8.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 SUPERFAMILY SSF51735 4 241 9.35E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 3.9E-5 T 14-10-2018 CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 241 3.9E-52 T 14-10-2018 CF65_01179 5e12c65d7f5ae0f72e2bc38aef66328b 242 Gene3D G3DSA:3.40.50.720 2 242 3.8E-73 T 14-10-2018 CF65_01891 a1552a0fe25f198b99cb41b401a48cd8 261 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 260 2.2E-107 T 14-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CF65_01891 a1552a0fe25f198b99cb41b401a48cd8 261 SUPERFAMILY SSF53613 1 251 3.74E-61 T 14-10-2018 IPR029056 Ribokinase-like CF65_01891 a1552a0fe25f198b99cb41b401a48cd8 261 Gene3D G3DSA:3.40.1190.20 1 261 4.5E-73 T 14-10-2018 IPR029056 Ribokinase-like CF65_01891 a1552a0fe25f198b99cb41b401a48cd8 261 Pfam PF08543 Phosphomethylpyrimidine kinase 43 237 1.0E-17 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CF65_02907 649402c526d88ba5982e38e79f7ac4e6 596 Pfam PF11412 Disulphide bond corrector protein DsbC 34 144 1.2E-25 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CF65_02907 649402c526d88ba5982e38e79f7ac4e6 596 Gene3D G3DSA:3.40.30.10 467 594 2.2E-30 T 14-10-2018 CF65_02907 649402c526d88ba5982e38e79f7ac4e6 596 SUPERFAMILY SSF52833 476 589 4.5E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_02907 649402c526d88ba5982e38e79f7ac4e6 596 Pfam PF13899 Thioredoxin-like 490 565 3.9E-10 T 14-10-2018 CF65_02907 649402c526d88ba5982e38e79f7ac4e6 596 SUPERFAMILY SSF74863 33 146 3.79E-31 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CF65_02907 649402c526d88ba5982e38e79f7ac4e6 596 Gene3D G3DSA:2.60.40.1250 27 161 4.6E-34 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CF65_02907 649402c526d88ba5982e38e79f7ac4e6 596 ProSitePatterns PS00194 Thioredoxin family active site. 500 518 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CF65_02907 649402c526d88ba5982e38e79f7ac4e6 596 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 197 402 1.3E-17 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CF65_02907 649402c526d88ba5982e38e79f7ac4e6 596 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 8 592 36.242 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CF65_00371 de1781666f47b71c627a4390fb3e59a8 298 Gene3D G3DSA:3.40.190.290 94 294 3.3E-28 T 14-10-2018 CF65_00371 de1781666f47b71c627a4390fb3e59a8 298 SUPERFAMILY SSF53850 90 275 3.44E-20 T 14-10-2018 CF65_00371 de1781666f47b71c627a4390fb3e59a8 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.1E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_00371 de1781666f47b71c627a4390fb3e59a8 298 Pfam PF03466 LysR substrate binding domain 90 278 9.8E-21 T 14-10-2018 IPR005119 LysR, substrate-binding CF65_00371 de1781666f47b71c627a4390fb3e59a8 298 SUPERFAMILY SSF46785 1 84 1.9E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00371 de1781666f47b71c627a4390fb3e59a8 298 Gene3D G3DSA:1.10.10.10 1 93 1.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02616 1b0ea7cb9a3fd6c3e1fab6cccbcbf458 304 Gene3D G3DSA:3.30.420.40 4 298 4.6E-83 T 14-10-2018 CF65_02616 1b0ea7cb9a3fd6c3e1fab6cccbcbf458 304 Pfam PF00480 ROK family 3 302 9.6E-92 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CF65_02616 1b0ea7cb9a3fd6c3e1fab6cccbcbf458 304 SUPERFAMILY SSF53067 2 302 4.98E-57 T 14-10-2018 CF65_02616 1b0ea7cb9a3fd6c3e1fab6cccbcbf458 304 Gene3D G3DSA:3.30.420.40 119 291 4.6E-83 T 14-10-2018 CF65_02616 1b0ea7cb9a3fd6c3e1fab6cccbcbf458 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CF65_01153 0cce0489614ee7e218c3f6ae08840544 220 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 79 1.1E-29 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CF65_01153 0cce0489614ee7e218c3f6ae08840544 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.1E-30 T 14-10-2018 CF65_01153 0cce0489614ee7e218c3f6ae08840544 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.1E-30 T 14-10-2018 CF65_01153 0cce0489614ee7e218c3f6ae08840544 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.1E-30 T 14-10-2018 CF65_01153 0cce0489614ee7e218c3f6ae08840544 220 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 185 18.72 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 PIRSF PIRSF000732 1 573 1.5E-218 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 SUPERFAMILY SSF51621 249 549 1.49E-110 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 5.2E-22 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 6.7E-126 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 SUPERFAMILY SSF47831 26 143 2.35E-33 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 7.2E-29 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 SUPERFAMILY SSF52009 125 246 5.49E-37 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 Gene3D G3DSA:3.20.20.60 234 575 1.0E-126 T 14-10-2018 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 2.2E-248 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 9.0E-31 T 14-10-2018 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 9.0E-31 T 14-10-2018 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 9.0E-31 T 14-10-2018 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 9.0E-31 T 14-10-2018 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 Gene3D G3DSA:3.50.30.10 4 233 4.4E-79 T 14-10-2018 CF65_01600 a8fe1f942614dccc7f1e42b09260cf85 575 Gene3D G3DSA:1.10.274.10 21 146 4.4E-79 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CF65_00204 91cc638d4f197d139eaa7a4c555ef794 199 Gene3D G3DSA:3.90.79.10 1 159 1.4E-47 T 14-10-2018 CF65_00204 91cc638d4f197d139eaa7a4c555ef794 199 Pfam PF00293 NUDIX domain 7 144 4.0E-24 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CF65_00204 91cc638d4f197d139eaa7a4c555ef794 199 PRINTS PR00502 NUDIX hydrolase family signature 33 47 5.6E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CF65_00204 91cc638d4f197d139eaa7a4c555ef794 199 PRINTS PR00502 NUDIX hydrolase family signature 47 62 5.6E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CF65_00204 91cc638d4f197d139eaa7a4c555ef794 199 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.228 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH CF65_00204 91cc638d4f197d139eaa7a4c555ef794 199 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CF65_00204 91cc638d4f197d139eaa7a4c555ef794 199 SUPERFAMILY SSF55811 6 155 5.5E-29 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CF65_01365 4686a0d8ac417b48c25fb5f386129cd5 82 SUPERFAMILY SSF54565 1 76 8.24E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01365 4686a0d8ac417b48c25fb5f386129cd5 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01365 4686a0d8ac417b48c25fb5f386129cd5 82 Pfam PF00886 Ribosomal protein S16 8 68 2.0E-25 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01365 4686a0d8ac417b48c25fb5f386129cd5 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.6E-30 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01365 4686a0d8ac417b48c25fb5f386129cd5 82 Gene3D G3DSA:3.30.1320.10 1 81 6.0E-32 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01365 4686a0d8ac417b48c25fb5f386129cd5 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 25.012 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02399 28b82f3b48eed9bb1b08beb35e48051a 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 5.7E-25 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02399 28b82f3b48eed9bb1b08beb35e48051a 71 Gene3D G3DSA:1.20.5.1150 16 61 1.1E-18 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02399 28b82f3b48eed9bb1b08beb35e48051a 71 Pfam PF01165 Ribosomal protein S21 4 56 7.4E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02399 28b82f3b48eed9bb1b08beb35e48051a 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 19.895 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02399 28b82f3b48eed9bb1b08beb35e48051a 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 2.0E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02399 28b82f3b48eed9bb1b08beb35e48051a 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02399 28b82f3b48eed9bb1b08beb35e48051a 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02399 28b82f3b48eed9bb1b08beb35e48051a 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02399 28b82f3b48eed9bb1b08beb35e48051a 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02399 28b82f3b48eed9bb1b08beb35e48051a 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 SUPERFAMILY SSF55957 358 444 1.57E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 2.7E-190 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 SUPERFAMILY SSF53738 156 256 1.57E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 4.5E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 2.0E-17 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 Gene3D G3DSA:3.30.310.50 370 445 1.2E-22 T 14-10-2018 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 363 2.7E-31 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 Gene3D G3DSA:3.40.120.10 3 154 3.6E-48 T 14-10-2018 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 47.011 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 2.4E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 2.4E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 2.4E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 Gene3D G3DSA:3.40.120.10 175 362 1.3E-63 T 14-10-2018 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 SUPERFAMILY SSF53738 258 364 1.45E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 Gene3D G3DSA:3.40.120.10 257 339 1.3E-63 T 14-10-2018 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 5.2E-45 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00636 8219e46fc749c8f6ecdf0af1b9949b22 445 SUPERFAMILY SSF53738 2 181 5.1E-49 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CF65_00379 9d4b750078e843a1c04e9ae99351b300 509 Pfam PF03606 C4-dicarboxylate anaerobic carrier 12 504 1.5E-169 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CF65_02586 b3382c37cf6882401f674f3d32460372 220 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 1 218 5.3E-100 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 CF65_02586 b3382c37cf6882401f674f3d32460372 220 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 1 209 1.5E-74 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CF65_02134 d592e48e2063230bccd51560c1f03a70 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 259 269 1.2E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CF65_02134 d592e48e2063230bccd51560c1f03a70 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 127 142 1.2E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CF65_02134 d592e48e2063230bccd51560c1f03a70 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 295 310 1.2E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CF65_02134 d592e48e2063230bccd51560c1f03a70 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 314 326 1.2E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CF65_02134 d592e48e2063230bccd51560c1f03a70 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 177 192 1.2E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CF65_02134 d592e48e2063230bccd51560c1f03a70 869 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 445 546 2.8E-31 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CF65_02134 d592e48e2063230bccd51560c1f03a70 869 Gene3D G3DSA:1.25.50.10 547 869 2.6E-109 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily CF65_02134 d592e48e2063230bccd51560c1f03a70 869 SUPERFAMILY SSF63737 4 193 7.45E-47 T 14-10-2018 CF65_02134 d592e48e2063230bccd51560c1f03a70 869 Gene3D G3DSA:2.60.40.1840 445 546 1.4E-29 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily CF65_02134 d592e48e2063230bccd51560c1f03a70 869 Gene3D G3DSA:2.60.40.1730 13 195 2.8E-70 T 14-10-2018 CF65_02134 d592e48e2063230bccd51560c1f03a70 869 Pfam PF01433 Peptidase family M1 domain 209 440 5.4E-62 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CF65_02134 d592e48e2063230bccd51560c1f03a70 869 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 550 869 6.5E-114 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CF65_02134 d592e48e2063230bccd51560c1f03a70 869 Gene3D G3DSA:1.10.390.10 281 444 1.9E-65 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily CF65_02134 d592e48e2063230bccd51560c1f03a70 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 10 868 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CF65_02134 d592e48e2063230bccd51560c1f03a70 869 Gene3D G3DSA:1.10.1740.60 196 280 3.3E-41 T 14-10-2018 CF65_02134 d592e48e2063230bccd51560c1f03a70 869 SUPERFAMILY SSF55486 205 451 4.98E-76 T 14-10-2018 CF65_02329 cc1a18d376a5c06edfcfc125c4f4d3f6 85 PIRSF PIRSF003113 1 85 1.8E-25 T 14-10-2018 IPR002634 BolA protein CF65_02329 cc1a18d376a5c06edfcfc125c4f4d3f6 85 SUPERFAMILY SSF82657 1 79 2.88E-28 T 14-10-2018 IPR036065 BolA-like superfamily CF65_02329 cc1a18d376a5c06edfcfc125c4f4d3f6 85 Gene3D G3DSA:3.30.300.90 1 84 1.6E-30 T 14-10-2018 CF65_02329 cc1a18d376a5c06edfcfc125c4f4d3f6 85 Pfam PF01722 BolA-like protein 21 73 8.9E-14 T 14-10-2018 IPR002634 BolA protein CF65_00432 b7dc8dc15052ac3625c8fe5b08e1893e 219 Gene3D G3DSA:3.40.50.150 2 50 3.1E-7 T 14-10-2018 CF65_00432 b7dc8dc15052ac3625c8fe5b08e1893e 219 Gene3D G3DSA:3.40.50.150 66 140 2.6E-6 T 14-10-2018 CF65_00432 b7dc8dc15052ac3625c8fe5b08e1893e 219 SUPERFAMILY SSF53335 1 165 1.15E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01462 93f1647f9833618d31e40aaadef8a974 390 SUPERFAMILY SSF46689 339 387 4.26E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01462 93f1647f9833618d31e40aaadef8a974 390 Pfam PF13377 Periplasmic binding protein-like domain 114 278 4.7E-38 T 14-10-2018 CF65_01462 93f1647f9833618d31e40aaadef8a974 390 SMART SM00342 302 385 4.5E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CF65_01462 93f1647f9833618d31e40aaadef8a974 390 Gene3D G3DSA:3.40.50.2300 103 279 2.0E-86 T 14-10-2018 CF65_01462 93f1647f9833618d31e40aaadef8a974 390 Gene3D G3DSA:3.40.50.2300 9 270 2.0E-86 T 14-10-2018 CF65_01462 93f1647f9833618d31e40aaadef8a974 390 Gene3D G3DSA:1.10.10.60 282 388 6.4E-27 T 14-10-2018 CF65_01462 93f1647f9833618d31e40aaadef8a974 390 SUPERFAMILY SSF53822 12 302 4.71E-52 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_01462 93f1647f9833618d31e40aaadef8a974 390 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 339 381 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CF65_01462 93f1647f9833618d31e40aaadef8a974 390 Pfam PF12833 Helix-turn-helix domain 311 387 1.5E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CF65_01462 93f1647f9833618d31e40aaadef8a974 390 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 369 385 4.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CF65_01462 93f1647f9833618d31e40aaadef8a974 390 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 354 369 4.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CF65_01731 30bed447a642cbb5fc36bbd4750c563b 482 SUPERFAMILY SSF103473 2 481 2.09E-70 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_01731 30bed447a642cbb5fc36bbd4750c563b 482 Gene3D G3DSA:1.20.1720.10 1 196 1.2E-46 T 14-10-2018 CF65_01731 30bed447a642cbb5fc36bbd4750c563b 482 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 1 474 3.8E-200 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CF65_01731 30bed447a642cbb5fc36bbd4750c563b 482 Pfam PF07690 Major Facilitator Superfamily 3 389 2.7E-53 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 88 9.3E-63 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 374 398 9.3E-63 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 398 421 9.3E-63 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 441 456 9.3E-63 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 107 127 9.3E-63 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 341 362 9.3E-63 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 456 476 9.3E-63 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 SUPERFAMILY SSF111369 96 159 1.44E-5 T 14-10-2018 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 56 477 1.0E-116 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 Gene3D G3DSA:2.40.50.100 104 128 2.9E-6 T 14-10-2018 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 Gene3D G3DSA:2.40.50.100 329 365 1.9E-12 T 14-10-2018 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 Gene3D G3DSA:1.10.287.470 268 328 1.9E-12 T 14-10-2018 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 Gene3D G3DSA:1.10.287.470 129 159 2.9E-6 T 14-10-2018 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 Gene3D G3DSA:2.40.30.170 366 408 1.9E-12 T 14-10-2018 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 Pfam PF13437 HlyD family secretion protein 329 443 1.8E-15 T 14-10-2018 CF65_02803 b6b3ce65f44c716dd87f0d456a082094 477 ProSitePatterns PS00543 HlyD family secretion proteins signature. 441 463 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CF65_01313 fad3039f0feefce6cabf3620de3da39a 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.356 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 CF65_01313 fad3039f0feefce6cabf3620de3da39a 151 Gene3D G3DSA:2.70.40.10 1 151 1.3E-55 T 14-10-2018 IPR036157 dUTPase-like superfamily CF65_01313 fad3039f0feefce6cabf3620de3da39a 151 SUPERFAMILY SSF51283 1 150 7.98E-56 T 14-10-2018 IPR036157 dUTPase-like superfamily CF65_01313 fad3039f0feefce6cabf3620de3da39a 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 150 1.7E-50 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 CF65_01313 fad3039f0feefce6cabf3620de3da39a 151 Pfam PF00692 dUTPase 16 149 3.7E-43 T 14-10-2018 IPR029054 dUTPase-like CF65_02120 e298c30d604104ca82e9e76db4acced2 161 Gene3D G3DSA:1.20.1260.10 1 161 4.3E-49 T 14-10-2018 IPR012347 Ferritin-like CF65_02120 e298c30d604104ca82e9e76db4acced2 161 Pfam PF00210 Ferritin-like domain 8 143 1.3E-38 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CF65_02120 e298c30d604104ca82e9e76db4acced2 161 SUPERFAMILY SSF47240 1 159 4.28E-56 T 14-10-2018 IPR009078 Ferritin-like superfamily CF65_01321 b03ac534ba6e85314d31bce5a7f9cd97 154 Gene3D G3DSA:3.40.140.10 30 154 7.0E-45 T 14-10-2018 CF65_01321 b03ac534ba6e85314d31bce5a7f9cd97 154 TIGRFAM TIGR00608 radc: DNA repair protein RadC 1 154 8.5E-60 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 CF65_01321 b03ac534ba6e85314d31bce5a7f9cd97 154 Pfam PF04002 RadC-like JAB domain 34 152 1.0E-44 T 14-10-2018 IPR025657 RadC-like JAB domain CF65_01321 b03ac534ba6e85314d31bce5a7f9cd97 154 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 103 108 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CF65_02740 9358ffb8407fb40019517aa1eb2f2c31 203 Gene3D G3DSA:2.30.30.40 18 86 6.1E-7 T 14-10-2018 CF65_02740 9358ffb8407fb40019517aa1eb2f2c31 203 SMART SM00287 23 87 6.2E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type CF65_02740 9358ffb8407fb40019517aa1eb2f2c31 203 PIRSF PIRSF006158 1 203 3.9E-64 T 14-10-2018 IPR016476 SH3 domain protein CF65_02740 9358ffb8407fb40019517aa1eb2f2c31 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 202 8.9E-48 T 14-10-2018 IPR016476 SH3 domain protein CF65_02740 9358ffb8407fb40019517aa1eb2f2c31 203 Pfam PF08239 Bacterial SH3 domain 34 84 4.4E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type CF65_01564 6af78fe47f853cb00d0f72bae3534246 317 SUPERFAMILY SSF51569 1 316 6.8E-117 T 14-10-2018 CF65_01564 6af78fe47f853cb00d0f72bae3534246 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CF65_01564 6af78fe47f853cb00d0f72bae3534246 317 Gene3D G3DSA:3.20.20.70 2 316 1.3E-146 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_01564 6af78fe47f853cb00d0f72bae3534246 317 TIGRFAM TIGR00874 talAB: transaldolase 3 314 6.7E-160 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CF65_01564 6af78fe47f853cb00d0f72bae3534246 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 2.3E-101 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CF65_01564 6af78fe47f853cb00d0f72bae3534246 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CF65_01564 6af78fe47f853cb00d0f72bae3534246 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.352 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CF65_02179 091cd55db66480da91d1c9db50605011 333 SUPERFAMILY SSF52418 72 331 3.14E-93 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CF65_02179 091cd55db66480da91d1c9db50605011 333 SUPERFAMILY SSF47648 1 69 3.14E-17 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CF65_02179 091cd55db66480da91d1c9db50605011 333 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 65 1.4E-13 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CF65_02179 091cd55db66480da91d1c9db50605011 333 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 333 38.927 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CF65_02179 091cd55db66480da91d1c9db50605011 333 Pfam PF00591 Glycosyl transferase family, a/b domain 75 322 6.5E-100 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CF65_02179 091cd55db66480da91d1c9db50605011 333 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 332 8.1E-123 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CF65_02179 091cd55db66480da91d1c9db50605011 333 Gene3D G3DSA:3.40.1030.10 74 322 5.0E-121 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CF65_02179 091cd55db66480da91d1c9db50605011 333 Gene3D G3DSA:1.20.970.10 13 185 5.0E-121 T 14-10-2018 CF65_01784 f2bd9a6ea1fe28d931bc98d3293cfa04 465 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 414 430 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CF65_01784 f2bd9a6ea1fe28d931bc98d3293cfa04 465 Pfam PF00939 Sodium:sulfate symporter transmembrane region 18 465 1.7E-59 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CF65_01784 f2bd9a6ea1fe28d931bc98d3293cfa04 465 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 39 464 7.2E-124 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CF65_02638 7eecc213e7404ad9b24d131b17c0cd76 230 SUPERFAMILY SSF51735 9 199 7.89E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02638 7eecc213e7404ad9b24d131b17c0cd76 230 Pfam PF01370 NAD dependent epimerase/dehydratase family 23 153 1.8E-8 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CF65_02638 7eecc213e7404ad9b24d131b17c0cd76 230 Gene3D G3DSA:3.40.50.720 9 227 4.4E-20 T 14-10-2018 CF65_02124 9b0b93a4228c67f1f9f2c2f5168fa8c5 257 Gene3D G3DSA:2.60.120.10 46 167 9.5E-47 T 14-10-2018 IPR014710 RmlC-like jelly roll fold CF65_02124 9b0b93a4228c67f1f9f2c2f5168fa8c5 257 SMART SM00100 33 154 1.3E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain CF65_02124 9b0b93a4228c67f1f9f2c2f5168fa8c5 257 SUPERFAMILY SSF46785 168 247 1.82E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_02124 9b0b93a4228c67f1f9f2c2f5168fa8c5 257 SUPERFAMILY SSF51206 26 165 2.88E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like CF65_02124 9b0b93a4228c67f1f9f2c2f5168fa8c5 257 Pfam PF00027 Cyclic nucleotide-binding domain 55 135 3.9E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain CF65_02124 9b0b93a4228c67f1f9f2c2f5168fa8c5 257 Pfam PF13545 Crp-like helix-turn-helix domain 171 244 2.2E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CF65_02124 9b0b93a4228c67f1f9f2c2f5168fa8c5 257 Gene3D G3DSA:1.10.10.10 168 252 4.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02124 9b0b93a4228c67f1f9f2c2f5168fa8c5 257 SMART SM00419 190 238 8.1E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CF65_02124 9b0b93a4228c67f1f9f2c2f5168fa8c5 257 ProSitePatterns PS00042 Crp-type HTH domain signature. 198 221 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CF65_02124 9b0b93a4228c67f1f9f2c2f5168fa8c5 257 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 212 227 1.8E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CF65_02124 9b0b93a4228c67f1f9f2c2f5168fa8c5 257 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 196 212 1.8E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 PIRSF PIRSF000530 3 384 6.5E-119 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 PRINTS PR00959 Mevalonate kinase family signature 25 49 4.4E-43 T 14-10-2018 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 PRINTS PR00959 Mevalonate kinase family signature 118 140 4.4E-43 T 14-10-2018 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 PRINTS PR00959 Mevalonate kinase family signature 330 347 4.4E-43 T 14-10-2018 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 PRINTS PR00959 Mevalonate kinase family signature 161 180 4.4E-43 T 14-10-2018 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 TIGRFAM TIGR00131 gal_kin: galactokinase 5 384 2.1E-165 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 SUPERFAMILY SSF55060 204 384 1.5E-52 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 SUPERFAMILY SSF54211 5 202 1.21E-60 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 Gene3D G3DSA:3.30.230.10 22 200 1.7E-127 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 Gene3D G3DSA:3.30.70.890 201 359 1.7E-127 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 Pfam PF00288 GHMP kinases N terminal domain 113 180 4.2E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 Pfam PF10509 Galactokinase galactose-binding signature 11 57 8.1E-20 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 PRINTS PR00473 Galactokinase signature 265 279 6.0E-29 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 PRINTS PR00473 Galactokinase signature 27 45 6.0E-29 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 PRINTS PR00473 Galactokinase signature 90 101 6.0E-29 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 PRINTS PR00473 Galactokinase signature 111 129 6.0E-29 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 120 131 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 Pfam PF08544 GHMP kinases C terminal 280 363 6.0E-14 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain CF65_00745 c2184fec3e4c3f0b92f402de95d4514e 384 Hamap MF_00246 Galactokinase [galK]. 25 383 43.35 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 714 748 1.8E-9 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 604 628 1.3E-5 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 4.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 4.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 4.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 4.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 4.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 SMART SM00493 3 138 2.1E-34 T 14-10-2018 IPR006171 TOPRIM domain CF65_02128 52fc449dce52487fe534eae45c49f55e 868 SMART SM00436 139 227 1.5E-50 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Gene3D G3DSA:2.20.25.10 811 868 2.5E-28 T 14-10-2018 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Pfam PF01751 Toprim domain 5 148 7.6E-34 T 14-10-2018 IPR006171 TOPRIM domain CF65_02128 52fc449dce52487fe534eae45c49f55e 868 SUPERFAMILY SSF57783 812 868 1.09E-20 T 14-10-2018 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Gene3D G3DSA:1.10.290.10 286 410 7.8E-159 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 SUPERFAMILY SSF57783 747 810 3.49E-19 T 14-10-2018 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Pfam PF01131 DNA topoisomerase 163 568 5.2E-126 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Gene3D G3DSA:1.10.460.10 171 577 7.8E-159 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 SUPERFAMILY SSF57783 706 745 3.23E-6 T 14-10-2018 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Pfam PF08272 Topoisomerase I zinc-ribbon-like 828 866 3.0E-18 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Pfam PF08272 Topoisomerase I zinc-ribbon-like 760 796 4.3E-11 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Gene3D G3DSA:3.40.50.140 1 169 7.1E-67 T 14-10-2018 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 SUPERFAMILY SSF56712 3 615 2.62E-200 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain CF65_02128 52fc449dce52487fe534eae45c49f55e 868 SMART SM00437 278 533 1.8E-124 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 737 54.688 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Gene3D G3DSA:2.70.20.10 219 479 7.8E-159 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 3.0E-247 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Gene3D G3DSA:3.30.65.10 703 747 5.0E-5 T 14-10-2018 CF65_02128 52fc449dce52487fe534eae45c49f55e 868 Gene3D G3DSA:3.30.65.10 748 810 3.6E-29 T 14-10-2018 CF65_02533 9d079255d5f2a0df76256c47bde1d4e2 631 Pfam PF00675 Insulinase (Peptidase family M16) 48 169 9.3E-35 T 14-10-2018 IPR011765 Peptidase M16, N-terminal CF65_02533 9d079255d5f2a0df76256c47bde1d4e2 631 Gene3D G3DSA:3.30.830.10 30 257 7.2E-63 T 14-10-2018 CF65_02533 9d079255d5f2a0df76256c47bde1d4e2 631 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 67 90 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CF65_02533 9d079255d5f2a0df76256c47bde1d4e2 631 SUPERFAMILY SSF63411 32 250 1.04E-45 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CF65_02533 9d079255d5f2a0df76256c47bde1d4e2 631 SUPERFAMILY SSF63411 512 628 3.44E-6 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CF65_02533 9d079255d5f2a0df76256c47bde1d4e2 631 Pfam PF05193 Peptidase M16 inactive domain 207 387 2.4E-18 T 14-10-2018 IPR007863 Peptidase M16, C-terminal CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 PRINTS PR00315 GTP-binding elongation factor signature 59 67 4.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 PRINTS PR00315 GTP-binding elongation factor signature 136 145 4.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 PRINTS PR00315 GTP-binding elongation factor signature 100 111 4.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 PRINTS PR00315 GTP-binding elongation factor signature 16 29 4.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 PRINTS PR00315 GTP-binding elongation factor signature 84 94 4.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 304.406 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 SUPERFAMILY SSF54980 409 503 5.28E-23 T 14-10-2018 IPR035647 EF-G domain III/V-like CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 Pfam PF00679 Elongation factor G C-terminus 409 493 9.3E-18 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 186 1.3E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 Pfam PF03144 Elongation factor Tu domain 2 215 285 1.4E-12 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 Gene3D G3DSA:3.40.50.300 10 195 4.2E-72 T 14-10-2018 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 Pfam PF00009 Elongation factor Tu GTP binding domain 12 191 6.2E-54 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 SUPERFAMILY SSF54980 302 380 2.84E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 Pfam PF06421 GTP-binding protein LepA C-terminus 497 602 9.1E-50 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 Gene3D G3DSA:3.30.70.870 296 377 6.0E-35 T 14-10-2018 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 SUPERFAMILY SSF52540 5 245 3.63E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 Gene3D G3DSA:3.30.70.2570 489 563 1.0E-33 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 TIGRFAM TIGR01393 lepA: elongation factor 4 12 604 0.0 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 Gene3D G3DSA:2.40.30.10 196 295 1.1E-35 T 14-10-2018 CF65_03003 6e6a05be0831e82770190ca8c851f0f4 608 Gene3D G3DSA:3.30.70.3380 378 488 8.1E-39 T 14-10-2018 CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 SUPERFAMILY SSF52374 14 310 5.09E-113 T 14-10-2018 CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 30 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 43 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 PRINTS PR00987 Glutamyl-tRNA synthetase signature 207 215 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 PRINTS PR00987 Glutamyl-tRNA synthetase signature 47 60 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 PRINTS PR00987 Glutamyl-tRNA synthetase signature 191 201 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 Gene3D G3DSA:3.40.50.620 13 326 5.6E-138 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 SUPERFAMILY SSF48163 311 473 8.89E-45 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 14 473 32.236 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 14 317 9.4E-124 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 21 32 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 14 477 1.4E-203 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CF65_00214 a0d9736d8ef971d6ebc7542cafea2346 481 Gene3D G3DSA:1.10.10.350 379 480 2.9E-23 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CF65_00398 2f64a2faa5e83fa6eba7d6bff85e1f70 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 13 30 2.7E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CF65_00398 2f64a2faa5e83fa6eba7d6bff85e1f70 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 90 105 2.7E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CF65_00398 2f64a2faa5e83fa6eba7d6bff85e1f70 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 131 146 2.7E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CF65_00398 2f64a2faa5e83fa6eba7d6bff85e1f70 164 Gene3D G3DSA:3.40.50.2300 10 164 7.7E-54 T 14-10-2018 CF65_00398 2f64a2faa5e83fa6eba7d6bff85e1f70 164 SUPERFAMILY SSF52788 8 158 6.02E-45 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily CF65_00398 2f64a2faa5e83fa6eba7d6bff85e1f70 164 SMART SM00226 11 157 2.1E-32 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CF65_00398 2f64a2faa5e83fa6eba7d6bff85e1f70 164 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 13 155 6.7E-34 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 Gene3D G3DSA:3.40.50.880 1 188 1.4E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 Pfam PF00117 Glutamine amidotransferase class-I 5 185 6.3E-36 T 14-10-2018 IPR017926 Glutamine amidotransferase CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 73 84 2.1E-11 T 14-10-2018 CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 2.1E-11 T 14-10-2018 CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 46 55 2.1E-11 T 14-10-2018 CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.2E-23 T 14-10-2018 CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 PRINTS PR00097 Anthranilate synthase component II signature 46 55 2.2E-23 T 14-10-2018 CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 PRINTS PR00097 Anthranilate synthase component II signature 98 106 2.2E-23 T 14-10-2018 CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 PRINTS PR00097 Anthranilate synthase component II signature 164 177 2.2E-23 T 14-10-2018 CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 PRINTS PR00097 Anthranilate synthase component II signature 3 17 2.2E-23 T 14-10-2018 CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 PRINTS PR00097 Anthranilate synthase component II signature 73 84 2.2E-23 T 14-10-2018 CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 SUPERFAMILY SSF52317 3 187 1.99E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like CF65_01611 6cd62711fbcb0b8b387b975738ed74b9 188 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 186 1.1E-38 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CF65_00310 fde1f706a54de1f64e82df44c335ce79 414 Gene3D G3DSA:3.40.980.20 236 414 3.2E-59 T 14-10-2018 CF65_00310 fde1f706a54de1f64e82df44c335ce79 414 SUPERFAMILY SSF142764 2 413 1.57E-129 T 14-10-2018 CF65_00310 fde1f706a54de1f64e82df44c335ce79 414 Gene3D G3DSA:3.40.50.10840 1 235 4.0E-90 T 14-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily CF65_00310 fde1f706a54de1f64e82df44c335ce79 414 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 249 406 9.5E-38 T 14-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain CF65_00310 fde1f706a54de1f64e82df44c335ce79 414 Pfam PF07005 Putative sugar-binding N-terminal domain 2 225 6.6E-66 T 14-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain CF65_02392 0b771b5b3464f20c6bc1d2b5cdd92f24 296 SUPERFAMILY SSF103481 39 139 2.09E-8 T 14-10-2018 CF65_02392 0b771b5b3464f20c6bc1d2b5cdd92f24 296 Pfam PF00892 EamA-like transporter family 6 136 2.8E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_02392 0b771b5b3464f20c6bc1d2b5cdd92f24 296 Pfam PF00892 EamA-like transporter family 147 279 3.7E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_02392 0b771b5b3464f20c6bc1d2b5cdd92f24 296 SUPERFAMILY SSF103481 188 285 1.7E-13 T 14-10-2018 CF65_01497 5012c95185c1d372871b8e3ad9283502 147 SUPERFAMILY SSF52218 4 147 4.19E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily CF65_01497 5012c95185c1d372871b8e3ad9283502 147 PRINTS PR00369 Flavodoxin signature 6 19 9.9E-6 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CF65_01497 5012c95185c1d372871b8e3ad9283502 147 PRINTS PR00369 Flavodoxin signature 83 93 9.9E-6 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CF65_01497 5012c95185c1d372871b8e3ad9283502 147 PRINTS PR00369 Flavodoxin signature 52 63 9.9E-6 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CF65_01497 5012c95185c1d372871b8e3ad9283502 147 Gene3D G3DSA:3.40.50.360 3 147 7.2E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily CF65_01497 5012c95185c1d372871b8e3ad9283502 147 Pfam PF00258 Flavodoxin 8 139 6.6E-26 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CF65_00308 cf90a9a88e8b9519a571e53bbd28499f 252 SMART SM01134 73 233 5.8E-64 T 14-10-2018 CF65_00308 cf90a9a88e8b9519a571e53bbd28499f 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.7E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_00308 cf90a9a88e8b9519a571e53bbd28499f 252 SMART SM00420 6 58 1.1E-21 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_00308 cf90a9a88e8b9519a571e53bbd28499f 252 Gene3D G3DSA:1.10.10.10 1 58 8.2E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00308 cf90a9a88e8b9519a571e53bbd28499f 252 SUPERFAMILY SSF46785 5 71 1.0E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00308 cf90a9a88e8b9519a571e53bbd28499f 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CF65_00308 cf90a9a88e8b9519a571e53bbd28499f 252 SUPERFAMILY SSF100950 75 232 2.72E-27 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_00308 cf90a9a88e8b9519a571e53bbd28499f 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 6.4E-48 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain CF65_00308 cf90a9a88e8b9519a571e53bbd28499f 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_00308 cf90a9a88e8b9519a571e53bbd28499f 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_00158 74a962884f51de12eeca9e2ae6e18b6a 208 SMART SM00644 45 196 4.5E-55 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CF65_00158 74a962884f51de12eeca9e2ae6e18b6a 208 Gene3D G3DSA:3.40.80.10 30 208 1.9E-58 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CF65_00158 74a962884f51de12eeca9e2ae6e18b6a 208 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 56 196 1.5E-27 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CF65_00158 74a962884f51de12eeca9e2ae6e18b6a 208 SUPERFAMILY SSF55846 32 207 6.41E-66 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CF65_01254 28abbd48ab3f311fdc1ed45a6347699f 90 Pfam PF01205 Uncharacterized protein family UPF0029 18 87 1.6E-13 T 14-10-2018 IPR001498 Impact, N-terminal CF65_01254 28abbd48ab3f311fdc1ed45a6347699f 90 Gene3D G3DSA:3.30.230.30 6 90 1.1E-26 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily CF65_01254 28abbd48ab3f311fdc1ed45a6347699f 90 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 48 77 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CF65_01254 28abbd48ab3f311fdc1ed45a6347699f 90 SUPERFAMILY SSF54211 20 89 1.74E-21 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00987 168ba47228f7c453e7718a30467f118c 254 Pfam PF04072 Leucine carboxyl methyltransferase 5 158 8.2E-18 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 CF65_00987 168ba47228f7c453e7718a30467f118c 254 SUPERFAMILY SSF53335 1 250 9.14E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00987 168ba47228f7c453e7718a30467f118c 254 Gene3D G3DSA:3.40.50.150 1 218 2.3E-34 T 14-10-2018 CF65_00987 168ba47228f7c453e7718a30467f118c 254 PIRSF PIRSF028177 1 254 7.1E-68 T 14-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 CF65_02250 c41561853fad9110d41419f0e97023a4 366 SUPERFAMILY SSF48695 16 172 2.8E-43 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily CF65_02250 c41561853fad9110d41419f0e97023a4 366 PIRSF PIRSF000014 1 366 7.6E-142 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 CF65_02250 c41561853fad9110d41419f0e97023a4 366 SUPERFAMILY SSF46626 306 359 1.85E-6 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 CF65_02250 c41561853fad9110d41419f0e97023a4 366 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 4 171 2.3E-62 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CF65_02250 c41561853fad9110d41419f0e97023a4 366 Gene3D G3DSA:1.10.3820.10 1 178 2.7E-32 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily CF65_02324 483c529f10b5e0f2c28ff1d3c6ef7e31 265 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02324 483c529f10b5e0f2c28ff1d3c6ef7e31 265 SMART SM00382 30 226 4.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02324 483c529f10b5e0f2c28ff1d3c6ef7e31 265 SUPERFAMILY SSF52540 5 234 3.17E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02324 483c529f10b5e0f2c28ff1d3c6ef7e31 265 Pfam PF00005 ABC transporter 22 169 1.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02324 483c529f10b5e0f2c28ff1d3c6ef7e31 265 Gene3D G3DSA:3.40.50.300 3 253 2.2E-62 T 14-10-2018 CF65_01832 3a5c58068d828a895efb98b64adb49b3 305 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 303 4.1E-98 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CF65_01832 3a5c58068d828a895efb98b64adb49b3 305 Hamap MF_00611 Protein FdhE [fdhE]. 3 304 46.426 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CF65_01832 3a5c58068d828a895efb98b64adb49b3 305 Pfam PF04216 Protein involved in formate dehydrogenase formation 20 302 7.7E-105 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CF65_01832 3a5c58068d828a895efb98b64adb49b3 305 SUPERFAMILY SSF144020 22 303 7.32E-90 T 14-10-2018 IPR024064 FdhE-like superfamily CF65_01832 3a5c58068d828a895efb98b64adb49b3 305 PIRSF PIRSF018296 1 305 4.6E-127 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CF65_01832 3a5c58068d828a895efb98b64adb49b3 305 Gene3D G3DSA:3.90.1670.10 22 305 1.7E-84 T 14-10-2018 IPR024064 FdhE-like superfamily CF65_02117 964cedc95ee0e27ea62a8d2a80ef468f 169 SUPERFAMILY SSF53098 3 158 1.69E-24 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_02117 964cedc95ee0e27ea62a8d2a80ef468f 169 Pfam PF00665 Integrase core domain 10 123 1.2E-17 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CF65_00734 6fb2cd6b7bb4c306b75e515d090ca088 49 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 32 2.0E-8 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CF65_00734 6fb2cd6b7bb4c306b75e515d090ca088 49 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 1 38 5.0E-11 T 14-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CF65_02478 9ac61e4f15d97ba1c61c4a115283d4e0 378 Pfam PF02378 Phosphotransferase system, EIIC 6 214 3.0E-56 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CF65_02478 9ac61e4f15d97ba1c61c4a115283d4e0 378 Gene3D G3DSA:3.30.1360.60 298 378 3.1E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CF65_02478 9ac61e4f15d97ba1c61c4a115283d4e0 378 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 316 333 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CF65_02478 9ac61e4f15d97ba1c61c4a115283d4e0 378 SUPERFAMILY SSF55604 303 375 7.32E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CF65_02478 9ac61e4f15d97ba1c61c4a115283d4e0 378 Pfam PF00367 phosphotransferase system, EIIB 306 338 6.6E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CF65_02478 9ac61e4f15d97ba1c61c4a115283d4e0 378 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 274 363 8.1E-15 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CF65_02742 bc93ba582b590dcc17b1a8df940b9c45 437 Hamap MF_01262 CCA-adding enzyme [cca]. 9 414 42.099 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CF65_02742 bc93ba582b590dcc17b1a8df940b9c45 437 SUPERFAMILY SSF81301 4 126 4.25E-32 T 14-10-2018 CF65_02742 bc93ba582b590dcc17b1a8df940b9c45 437 TIGRFAM TIGR00277 HDIG: HDIG domain 238 294 5.7E-8 T 14-10-2018 IPR006675 HDIG domain CF65_02742 bc93ba582b590dcc17b1a8df940b9c45 437 PIRSF PIRSF000813 9 421 2.4E-195 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CF65_02742 bc93ba582b590dcc17b1a8df940b9c45 437 Pfam PF01743 Poly A polymerase head domain 11 130 5.8E-17 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CF65_02742 bc93ba582b590dcc17b1a8df940b9c45 437 Hamap MF_01261 Multifunctional CCA protein [cca]. 9 420 52.203 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CF65_02742 bc93ba582b590dcc17b1a8df940b9c45 437 Gene3D G3DSA:1.10.3090.10 131 420 3.2E-45 T 14-10-2018 CF65_02742 bc93ba582b590dcc17b1a8df940b9c45 437 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 157 220 2.0E-15 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CF65_02742 bc93ba582b590dcc17b1a8df940b9c45 437 Pfam PF01966 HD domain 238 322 2.1E-8 T 14-10-2018 IPR006674 HD domain CF65_02742 bc93ba582b590dcc17b1a8df940b9c45 437 Gene3D G3DSA:3.30.460.10 1 130 2.3E-28 T 14-10-2018 CF65_02742 bc93ba582b590dcc17b1a8df940b9c45 437 SUPERFAMILY SSF81891 128 416 3.4E-54 T 14-10-2018 CF65_00958 164934bfce40275f33f320f19cea703a 822 Pfam PF01295 Adenylate cyclase, class-I 220 817 2.2E-246 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CF65_00958 164934bfce40275f33f320f19cea703a 822 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 587 601 - T 14-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CF65_00958 164934bfce40275f33f320f19cea703a 822 SUPERFAMILY SSF81301 70 153 1.58E-5 T 14-10-2018 CF65_00958 164934bfce40275f33f320f19cea703a 822 PIRSF PIRSF001444 1 822 0.0 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CF65_00958 164934bfce40275f33f320f19cea703a 822 Pfam PF12633 Adenylate cyclase NT domain 2 193 3.9E-75 T 14-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 CF65_00958 164934bfce40275f33f320f19cea703a 822 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 234 245 - T 14-10-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CF65_00849 94311dbfc39d9ec486971ee62e5b4c74 223 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 72 223 48.209 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CF65_00849 94311dbfc39d9ec486971ee62e5b4c74 223 Pfam PF02381 MraZ protein, putative antitoxin-like 72 146 1.2E-23 T 14-10-2018 IPR020603 MraZ domain CF65_00849 94311dbfc39d9ec486971ee62e5b4c74 223 Pfam PF02381 MraZ protein, putative antitoxin-like 148 207 4.6E-20 T 14-10-2018 IPR020603 MraZ domain CF65_00849 94311dbfc39d9ec486971ee62e5b4c74 223 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 72 206 2.0E-65 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CF65_00849 94311dbfc39d9ec486971ee62e5b4c74 223 Gene3D G3DSA:2.40.330.20 69 213 1.4E-42 T 14-10-2018 IPR038619 MraZ superfamily CF65_00849 94311dbfc39d9ec486971ee62e5b4c74 223 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 72 222 2.6E-59 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CF65_00849 94311dbfc39d9ec486971ee62e5b4c74 223 SUPERFAMILY SSF89447 71 205 3.87E-45 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily CF65_01782 a42f664801f7943eec595bb7c07c4a08 259 SUPERFAMILY SSF46785 4 108 6.8E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_01782 a42f664801f7943eec595bb7c07c4a08 259 Gene3D G3DSA:1.10.10.10 1 108 3.7E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01782 a42f664801f7943eec595bb7c07c4a08 259 PIRSF PIRSF005763 1 259 2.3E-79 T 14-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 CF65_01782 a42f664801f7943eec595bb7c07c4a08 259 Gene3D G3DSA:2.40.50.100 182 249 5.0E-28 T 14-10-2018 CF65_01782 a42f664801f7943eec595bb7c07c4a08 259 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 84 4.6E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01782 a42f664801f7943eec595bb7c07c4a08 259 SUPERFAMILY SSF50331 123 191 2.98E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01782 a42f664801f7943eec595bb7c07c4a08 259 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 190 2.5E-20 T 14-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 CF65_01782 a42f664801f7943eec595bb7c07c4a08 259 Pfam PF03459 TOBE domain 197 255 7.5E-7 T 14-10-2018 IPR005116 Transport-associated OB, type 1 CF65_01782 a42f664801f7943eec595bb7c07c4a08 259 Pfam PF03459 TOBE domain 125 189 2.4E-16 T 14-10-2018 IPR005116 Transport-associated OB, type 1 CF65_01782 a42f664801f7943eec595bb7c07c4a08 259 SUPERFAMILY SSF50331 177 255 2.08E-5 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01782 a42f664801f7943eec595bb7c07c4a08 259 Gene3D G3DSA:2.40.50.100 119 254 5.0E-28 T 14-10-2018 CF65_01782 a42f664801f7943eec595bb7c07c4a08 259 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 17 111 9.0E-38 T 14-10-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 SUPERFAMILY SSF54810 399 519 8.24E-51 T 14-10-2018 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 PRINTS PR00097 Anthranilate synthase component II signature 171 184 1.9E-6 T 14-10-2018 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 PRINTS PR00097 Anthranilate synthase component II signature 53 62 1.9E-6 T 14-10-2018 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 PRINTS PR00097 Anthranilate synthase component II signature 80 91 1.9E-6 T 14-10-2018 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 206 519 1.8E-155 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 519 55.951 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 Gene3D G3DSA:3.40.50.620 203 399 6.7E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 SUPERFAMILY SSF52402 191 414 2.43E-57 T 14-10-2018 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 1.2E-7 T 14-10-2018 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 1.2E-7 T 14-10-2018 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 PRINTS PR00096 Glutamine amidotransferase superfamily signature 171 184 1.2E-7 T 14-10-2018 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 Pfam PF02540 NAD synthase 216 286 1.4E-7 T 14-10-2018 IPR022310 NAD/GMP synthase CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 199 2.1E-84 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 Gene3D G3DSA:3.30.300.10 400 519 1.2E-50 T 14-10-2018 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 Pfam PF00958 GMP synthase C terminal domain 427 518 1.0E-42 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 SUPERFAMILY SSF52317 6 231 6.28E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 Gene3D G3DSA:3.40.50.880 8 200 3.0E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 Pfam PF00117 Glutamine amidotransferase class-I 11 194 1.4E-41 T 14-10-2018 IPR017926 Glutamine amidotransferase CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 5.2E-6 T 14-10-2018 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 5.2E-6 T 14-10-2018 CF65_01913 90ff1fa5ea45a43093ea81c644784928 519 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 5.2E-6 T 14-10-2018 CF65_01656 312bab26c77f9b294c673bd909181f8b 372 Gene3D G3DSA:2.40.50.100 240 365 1.2E-44 T 14-10-2018 CF65_01656 312bab26c77f9b294c673bd909181f8b 372 SUPERFAMILY SSF52540 4 243 7.59E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01656 312bab26c77f9b294c673bd909181f8b 372 Pfam PF08402 TOBE domain 283 356 4.7E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 CF65_01656 312bab26c77f9b294c673bd909181f8b 372 SUPERFAMILY SSF50331 236 366 1.21E-29 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01656 312bab26c77f9b294c673bd909181f8b 372 Pfam PF00005 ABC transporter 20 161 2.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01656 312bab26c77f9b294c673bd909181f8b 372 SMART SM00382 28 219 7.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01656 312bab26c77f9b294c673bd909181f8b 372 Gene3D G3DSA:3.40.50.300 1 238 4.5E-75 T 14-10-2018 CF65_01656 312bab26c77f9b294c673bd909181f8b 372 Gene3D G3DSA:2.40.50.140 290 348 1.2E-44 T 14-10-2018 CF65_01656 312bab26c77f9b294c673bd909181f8b 372 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01998 ace9d76068fa8a338d265f2ca3b81f72 322 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 145 159 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CF65_01998 ace9d76068fa8a338d265f2ca3b81f72 322 SMART SM00363 41 112 1.6E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01998 ace9d76068fa8a338d265f2ca3b81f72 322 Pfam PF00849 RNA pseudouridylate synthase 107 237 1.6E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01998 ace9d76068fa8a338d265f2ca3b81f72 322 Gene3D G3DSA:3.30.70.1560 169 259 2.1E-50 T 14-10-2018 CF65_01998 ace9d76068fa8a338d265f2ca3b81f72 322 SUPERFAMILY SSF55174 43 136 6.48E-10 T 14-10-2018 CF65_01998 ace9d76068fa8a338d265f2ca3b81f72 322 Gene3D G3DSA:3.30.70.580 108 267 2.1E-50 T 14-10-2018 CF65_01998 ace9d76068fa8a338d265f2ca3b81f72 322 SUPERFAMILY SSF55120 107 274 2.16E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01998 ace9d76068fa8a338d265f2ca3b81f72 322 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 111 271 9.1E-62 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CF65_01998 ace9d76068fa8a338d265f2ca3b81f72 322 Pfam PF01479 S4 domain 42 80 1.1E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01998 ace9d76068fa8a338d265f2ca3b81f72 322 Gene3D G3DSA:3.10.290.10 36 98 3.8E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CF65_01965 7eb0233dec1e555446513935988bf46a 488 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 244 301 6.7E-19 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CF65_01965 7eb0233dec1e555446513935988bf46a 488 SUPERFAMILY SSF81891 213 423 1.29E-45 T 14-10-2018 CF65_01965 7eb0233dec1e555446513935988bf46a 488 Gene3D G3DSA:3.30.460.10 50 211 1.4E-59 T 14-10-2018 CF65_01965 7eb0233dec1e555446513935988bf46a 488 Gene3D G3DSA:1.10.3090.10 213 462 5.6E-85 T 14-10-2018 CF65_01965 7eb0233dec1e555446513935988bf46a 488 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 53 478 4.3E-149 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CF65_01965 7eb0233dec1e555446513935988bf46a 488 Pfam PF01743 Poly A polymerase head domain 83 214 2.9E-39 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CF65_01965 7eb0233dec1e555446513935988bf46a 488 Pfam PF12626 Polymerase A arginine-rich C-terminus 359 474 7.6E-34 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain CF65_01965 7eb0233dec1e555446513935988bf46a 488 SUPERFAMILY SSF81301 55 211 1.42E-40 T 14-10-2018 CF65_01965 7eb0233dec1e555446513935988bf46a 488 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 16 480 35.699 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CF65_02735 5b5b436de6da73673c519d082effb4ef 457 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 6.4E-235 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CF65_02735 5b5b436de6da73673c519d082effb4ef 457 SUPERFAMILY SSF54211 255 454 1.21E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_02735 5b5b436de6da73673c519d082effb4ef 457 Pfam PF13481 AAA domain 85 222 6.9E-12 T 14-10-2018 CF65_02735 5b5b436de6da73673c519d082effb4ef 457 Gene3D G3DSA:3.30.230.10 317 456 1.5E-20 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CF65_02735 5b5b436de6da73673c519d082effb4ef 457 Pfam PF13541 Subunit ChlI of Mg-chelatase 345 430 3.6E-9 T 14-10-2018 CF65_02735 5b5b436de6da73673c519d082effb4ef 457 SUPERFAMILY SSF52540 69 291 2.6E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02735 5b5b436de6da73673c519d082effb4ef 457 SMART SM00382 91 244 5.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02735 5b5b436de6da73673c519d082effb4ef 457 Hamap MF_01498 DNA repair protein RadA [radA]. 21 455 43.052 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CF65_02735 5b5b436de6da73673c519d082effb4ef 457 Gene3D G3DSA:3.40.50.300 66 279 1.6E-39 T 14-10-2018 CF65_02735 5b5b436de6da73673c519d082effb4ef 457 PRINTS PR01874 DNA repair protein radA signature 174 198 9.0E-94 T 14-10-2018 CF65_02735 5b5b436de6da73673c519d082effb4ef 457 PRINTS PR01874 DNA repair protein radA signature 124 141 9.0E-94 T 14-10-2018 CF65_02735 5b5b436de6da73673c519d082effb4ef 457 PRINTS PR01874 DNA repair protein radA signature 213 241 9.0E-94 T 14-10-2018 CF65_02735 5b5b436de6da73673c519d082effb4ef 457 PRINTS PR01874 DNA repair protein radA signature 10 34 9.0E-94 T 14-10-2018 CF65_02735 5b5b436de6da73673c519d082effb4ef 457 PRINTS PR01874 DNA repair protein radA signature 322 345 9.0E-94 T 14-10-2018 CF65_02735 5b5b436de6da73673c519d082effb4ef 457 PRINTS PR01874 DNA repair protein radA signature 248 274 9.0E-94 T 14-10-2018 CF65_02735 5b5b436de6da73673c519d082effb4ef 457 PRINTS PR01874 DNA repair protein radA signature 83 111 9.0E-94 T 14-10-2018 CF65_01232 a0dc1515fc2acc5b567d7db64994f897 130 Gene3D G3DSA:3.30.1370.30 2 72 3.3E-26 T 14-10-2018 CF65_01232 a0dc1515fc2acc5b567d7db64994f897 130 Pfam PF00410 Ribosomal protein S8 5 129 1.1E-46 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01232 a0dc1515fc2acc5b567d7db64994f897 130 SUPERFAMILY SSF56047 5 129 9.94E-45 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01232 a0dc1515fc2acc5b567d7db64994f897 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.615 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01232 a0dc1515fc2acc5b567d7db64994f897 130 Gene3D G3DSA:3.30.1490.10 73 130 2.9E-25 T 14-10-2018 CF65_01232 a0dc1515fc2acc5b567d7db64994f897 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00983 69b2259c8d745e4d0890ea086994a408 281 Pfam PF00248 Aldo/keto reductase family 22 259 2.8E-46 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain CF65_00983 69b2259c8d745e4d0890ea086994a408 281 SUPERFAMILY SSF51430 1 267 1.02E-91 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CF65_00983 69b2259c8d745e4d0890ea086994a408 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 121 138 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CF65_00983 69b2259c8d745e4d0890ea086994a408 281 PIRSF PIRSF000097 1 275 4.8E-84 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CF65_00983 69b2259c8d745e4d0890ea086994a408 281 PRINTS PR00069 Aldo-keto reductase signature 155 184 9.7E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CF65_00983 69b2259c8d745e4d0890ea086994a408 281 PRINTS PR00069 Aldo-keto reductase signature 35 59 9.7E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CF65_00983 69b2259c8d745e4d0890ea086994a408 281 PRINTS PR00069 Aldo-keto reductase signature 92 110 9.7E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CF65_00983 69b2259c8d745e4d0890ea086994a408 281 PRINTS PR00069 Aldo-keto reductase signature 194 218 9.7E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CF65_00983 69b2259c8d745e4d0890ea086994a408 281 PRINTS PR00069 Aldo-keto reductase signature 121 138 9.7E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CF65_00983 69b2259c8d745e4d0890ea086994a408 281 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CF65_00983 69b2259c8d745e4d0890ea086994a408 281 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 227 242 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CF65_00983 69b2259c8d745e4d0890ea086994a408 281 Gene3D G3DSA:3.20.20.100 1 281 2.8E-116 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CF65_01973 52c2a87308250f606dae41a2d4224b31 410 PRINTS PR00471 Acetate kinase family signature 216 237 2.3E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 PRINTS PR00471 Acetate kinase family signature 335 351 2.3E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 PRINTS PR00471 Acetate kinase family signature 186 199 2.3E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 PRINTS PR00471 Acetate kinase family signature 16 27 2.3E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 PRINTS PR00471 Acetate kinase family signature 312 325 2.3E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 PRINTS PR00471 Acetate kinase family signature 390 402 2.3E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 16 27 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 SUPERFAMILY SSF53067 14 208 5.76E-61 T 14-10-2018 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 Pfam PF00871 Acetokinase family 16 403 1.9E-169 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 Gene3D G3DSA:3.30.420.40 210 410 2.0E-80 T 14-10-2018 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 TIGRFAM TIGR00016 ackA: acetate kinase 12 409 1.8E-176 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 SUPERFAMILY SSF53067 170 408 1.65E-82 T 14-10-2018 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 Gene3D G3DSA:3.30.420.40 13 208 3.7E-72 T 14-10-2018 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 PIRSF PIRSF000722 12 410 5.5E-145 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 Hamap MF_00020 Acetate kinase [ackA]. 1 410 175.343 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CF65_01973 52c2a87308250f606dae41a2d4224b31 410 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 216 233 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CF65_00194 7aef6ad4cf2ac180dcf68dad587581ea 455 SMART SM00729 50 270 3.1E-49 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CF65_00194 7aef6ad4cf2ac180dcf68dad587581ea 455 Gene3D G3DSA:3.80.30.20 1 361 1.3E-133 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CF65_00194 7aef6ad4cf2ac180dcf68dad587581ea 455 SUPERFAMILY SSF102114 4 441 1.57E-137 T 14-10-2018 CF65_00194 7aef6ad4cf2ac180dcf68dad587581ea 455 PIRSF PIRSF000167 1 452 1.3E-169 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 CF65_00194 7aef6ad4cf2ac180dcf68dad587581ea 455 Gene3D G3DSA:1.10.10.920 362 455 3.1E-32 T 14-10-2018 CF65_00194 7aef6ad4cf2ac180dcf68dad587581ea 455 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 455 2.2E-209 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 CF65_00194 7aef6ad4cf2ac180dcf68dad587581ea 455 Pfam PF04055 Radical SAM superfamily 55 220 1.5E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CF65_00559 38cb0706be1f2a2de69b8489aeb5b92e 104 PIRSF PIRSF019302 1 104 5.8E-43 T 14-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 CF65_00559 38cb0706be1f2a2de69b8489aeb5b92e 104 Pfam PF10084 Uncharacterized protein conserved in bacteria (DUF2322) 3 100 9.7E-39 T 14-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 CF65_00692 68f4ed491de81f163dfa79f66ae07d01 400 Pfam PF13502 AsmA-like C-terminal region 218 356 1.0E-5 T 14-10-2018 IPR032712 AsmA-like, C-terminal CF65_00516 63aeeb94e661bf43bfd4f1af47ce1d80 168 Gene3D G3DSA:3.30.1360.80 1 168 2.0E-71 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CF65_00516 63aeeb94e661bf43bfd4f1af47ce1d80 168 SUPERFAMILY SSF63411 4 162 4.3E-66 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CF65_00516 63aeeb94e661bf43bfd4f1af47ce1d80 168 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 5.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CF65_00516 63aeeb94e661bf43bfd4f1af47ce1d80 168 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 5.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CF65_00516 63aeeb94e661bf43bfd4f1af47ce1d80 168 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 5.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CF65_00516 63aeeb94e661bf43bfd4f1af47ce1d80 168 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 5.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CF65_00516 63aeeb94e661bf43bfd4f1af47ce1d80 168 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 5.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CF65_00516 63aeeb94e661bf43bfd4f1af47ce1d80 168 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 162 1.0E-73 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CF65_00516 63aeeb94e661bf43bfd4f1af47ce1d80 168 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 36.054 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CF65_00516 63aeeb94e661bf43bfd4f1af47ce1d80 168 PIRSF PIRSF006160 1 162 2.0E-67 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CF65_00516 63aeeb94e661bf43bfd4f1af47ce1d80 168 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 3.9E-61 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CF65_01441 b4ab371a4c2dd946a1f5d1c83012cfb0 358 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 127 198 2.8E-11 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CF65_01441 b4ab371a4c2dd946a1f5d1c83012cfb0 358 SMART SM00967 126 201 6.3E-9 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CF65_01441 b4ab371a4c2dd946a1f5d1c83012cfb0 358 SUPERFAMILY SSF75217 194 356 7.85E-25 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases CF65_01441 b4ab371a4c2dd946a1f5d1c83012cfb0 358 Gene3D G3DSA:3.40.1280.10 204 358 3.3E-27 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_01441 b4ab371a4c2dd946a1f5d1c83012cfb0 358 SUPERFAMILY SSF55315 116 196 3.3E-11 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like CF65_01441 b4ab371a4c2dd946a1f5d1c83012cfb0 358 Pfam PF00588 SpoU rRNA Methylase family 216 352 1.3E-18 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CF65_01441 b4ab371a4c2dd946a1f5d1c83012cfb0 358 PIRSF PIRSF006280 1 358 2.7E-139 T 14-10-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 Gene3D G3DSA:1.10.4050.10 5 126 1.0E-19 T 14-10-2018 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 Gene3D G3DSA:3.30.460.100 595 844 1.5E-85 T 14-10-2018 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 SUPERFAMILY SSF81593 304 470 7.06E-40 T 14-10-2018 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 Gene3D G3DSA:3.30.460.10 127 301 1.5E-59 T 14-10-2018 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 SUPERFAMILY SSF81593 848 977 3.3E-33 T 14-10-2018 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 Pfam PF08335 GlnD PII-uridylyltransferase 314 470 3.7E-41 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 Pfam PF08335 GlnD PII-uridylyltransferase 860 950 7.9E-11 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 Gene3D G3DSA:1.20.120.1510 480 594 3.5E-30 T 14-10-2018 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 47 292 1.1E-95 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 586 838 1.2E-96 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 43 977 18.93 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 SUPERFAMILY SSF81301 558 848 4.58E-87 T 14-10-2018 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 Gene3D G3DSA:1.20.120.330 845 977 2.3E-42 T 14-10-2018 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 SUPERFAMILY SSF81301 40 303 3.27E-81 T 14-10-2018 CF65_01857 34e53e4aa9bce34a3028cda24e442e5d 977 Gene3D G3DSA:1.20.120.330 302 474 1.4E-47 T 14-10-2018 CF65_01681 1d9bc2960f31c31b91185a1f5773d91b 144 Gene3D G3DSA:3.40.190.10 8 103 1.4E-16 T 14-10-2018 CF65_01681 1d9bc2960f31c31b91185a1f5773d91b 144 Gene3D G3DSA:3.40.190.10 104 140 1.4E-16 T 14-10-2018 CF65_01681 1d9bc2960f31c31b91185a1f5773d91b 144 SUPERFAMILY SSF53850 5 142 1.79E-19 T 14-10-2018 CF65_01681 1d9bc2960f31c31b91185a1f5773d91b 144 Pfam PF13531 Bacterial extracellular solute-binding protein 2 140 5.8E-17 T 14-10-2018 CF65_01966 de47ec7d473af62b6dd3857855338bc3 166 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CF65_01966 de47ec7d473af62b6dd3857855338bc3 166 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 133 4.5E-46 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CF65_01966 de47ec7d473af62b6dd3857855338bc3 166 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 133 3.4E-38 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CF65_01966 de47ec7d473af62b6dd3857855338bc3 166 SUPERFAMILY SSF55083 1 156 2.35E-56 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CF65_01966 de47ec7d473af62b6dd3857855338bc3 166 Gene3D G3DSA:3.30.70.560 1 160 3.9E-59 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CF65_02017 9fa46bfede3e41eaddeb217cab440b43 119 Pfam PF02021 Uncharacterised protein family UPF0102 13 103 4.8E-24 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 CF65_02017 9fa46bfede3e41eaddeb217cab440b43 119 Gene3D G3DSA:3.40.1350.10 12 119 2.7E-27 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CF65_02017 9fa46bfede3e41eaddeb217cab440b43 119 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 2 119 3.8E-50 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 CF65_02017 9fa46bfede3e41eaddeb217cab440b43 119 SUPERFAMILY SSF52980 6 109 7.4E-20 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CF65_02017 9fa46bfede3e41eaddeb217cab440b43 119 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 117 22.513 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 CF65_01790 8dc53e411ab8883ffa8fce62733c8206 374 Gene3D G3DSA:3.40.430.10 147 374 5.5E-68 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CF65_01790 8dc53e411ab8883ffa8fce62733c8206 374 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 105 2.2E-21 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CF65_01790 8dc53e411ab8883ffa8fce62733c8206 374 Pfam PF01872 RibD C-terminal domain 153 368 2.4E-53 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CF65_01790 8dc53e411ab8883ffa8fce62733c8206 374 SUPERFAMILY SSF53597 150 371 4.15E-54 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CF65_01790 8dc53e411ab8883ffa8fce62733c8206 374 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 13 369 5.5E-139 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 CF65_01790 8dc53e411ab8883ffa8fce62733c8206 374 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 94 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CF65_01790 8dc53e411ab8883ffa8fce62733c8206 374 PIRSF PIRSF006769 5 374 7.0E-122 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 CF65_01790 8dc53e411ab8883ffa8fce62733c8206 374 Gene3D G3DSA:3.40.140.10 1 146 7.0E-44 T 14-10-2018 CF65_01790 8dc53e411ab8883ffa8fce62733c8206 374 SUPERFAMILY SSF53927 9 151 2.84E-46 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CF65_01790 8dc53e411ab8883ffa8fce62733c8206 374 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 371 2.4E-67 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 Gene3D G3DSA:3.40.50.10860 56 191 3.0E-174 T 14-10-2018 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 Gene3D G3DSA:3.40.50.720 210 375 3.0E-174 T 14-10-2018 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 123 136 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 SUPERFAMILY SSF53223 8 197 5.12E-72 T 14-10-2018 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 SUPERFAMILY SSF51735 203 450 5.67E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 SMART SM00839 205 448 4.5E-97 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 203 448 5.8E-87 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 PIRSF PIRSF000185 23 450 3.6E-115 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 185 1.8E-48 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 Gene3D G3DSA:1.10.285.10 386 450 7.1E-13 T 14-10-2018 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 3.7E-32 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 236 256 3.7E-32 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 374 385 3.7E-32 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 194 216 3.7E-32 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CF65_00221 cb86f661a8a23963bece3c9f39acb050 450 Gene3D G3DSA:1.10.285.10 10 385 3.0E-174 T 14-10-2018 CF65_02410 aaa2d52414591d8edbe47847ce2d2a47 345 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 2 344 1.3E-66 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 CF65_02410 aaa2d52414591d8edbe47847ce2d2a47 345 Hamap MF_00509 Cell division protein ZipA [zipA]. 1 345 21.885 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 CF65_02410 aaa2d52414591d8edbe47847ce2d2a47 345 SMART SM00771 214 344 8.1E-63 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CF65_02410 aaa2d52414591d8edbe47847ce2d2a47 345 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 217 341 6.5E-41 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CF65_02410 aaa2d52414591d8edbe47847ce2d2a47 345 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 218 344 9.0E-46 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CF65_02410 aaa2d52414591d8edbe47847ce2d2a47 345 Gene3D G3DSA:3.30.1400.10 213 345 4.5E-38 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 CF65_02410 aaa2d52414591d8edbe47847ce2d2a47 345 SUPERFAMILY SSF64383 217 344 3.92E-40 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 CF65_02977 0d6b50da58f750f8fbca06822ebc5303 247 Pfam PF01553 Acyltransferase 63 180 6.0E-33 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CF65_02977 0d6b50da58f750f8fbca06822ebc5303 247 SUPERFAMILY SSF69593 5 238 8.37E-65 T 14-10-2018 CF65_02977 0d6b50da58f750f8fbca06822ebc5303 247 SMART SM00563 67 182 7.8E-41 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CF65_02977 0d6b50da58f750f8fbca06822ebc5303 247 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 2.1E-48 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 CF65_02699 ab533a7769de5cde676203cdd866c7b4 561 SUPERFAMILY SSF53706 2 438 8.77E-136 T 14-10-2018 CF65_02699 ab533a7769de5cde676203cdd866c7b4 561 Pfam PF01568 Molydopterin dinucleotide binding domain 420 525 8.2E-26 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CF65_02699 ab533a7769de5cde676203cdd866c7b4 561 Gene3D G3DSA:1.20.5.460 534 560 2.3E-5 T 14-10-2018 CF65_02699 ab533a7769de5cde676203cdd866c7b4 561 Gene3D G3DSA:3.40.228.10 1 184 2.3E-135 T 14-10-2018 CF65_02699 ab533a7769de5cde676203cdd866c7b4 561 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 460 487 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CF65_02699 ab533a7769de5cde676203cdd866c7b4 561 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 277 294 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CF65_02699 ab533a7769de5cde676203cdd866c7b4 561 Pfam PF00384 Molybdopterin oxidoreductase 1 331 6.0E-69 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02699 ab533a7769de5cde676203cdd866c7b4 561 Gene3D G3DSA:2.40.40.20 417 533 1.5E-37 T 14-10-2018 CF65_02699 ab533a7769de5cde676203cdd866c7b4 561 Gene3D G3DSA:3.40.50.740 185 374 2.3E-135 T 14-10-2018 CF65_02699 ab533a7769de5cde676203cdd866c7b4 561 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 1 530 2.1E-207 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 CF65_02699 ab533a7769de5cde676203cdd866c7b4 561 SUPERFAMILY SSF50692 410 548 4.77E-39 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CF65_01391 28674647e6d32aa3f7d67b6788ee7a13 812 SUPERFAMILY SSF69593 270 483 3.53E-23 T 14-10-2018 CF65_01391 28674647e6d32aa3f7d67b6788ee7a13 812 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 805 32.099 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CF65_01391 28674647e6d32aa3f7d67b6788ee7a13 812 Pfam PF01553 Acyltransferase 282 424 7.1E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CF65_01391 28674647e6d32aa3f7d67b6788ee7a13 812 PIRSF PIRSF500064 2 812 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CF65_01391 28674647e6d32aa3f7d67b6788ee7a13 812 SMART SM00563 300 427 1.8E-30 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CF65_01391 28674647e6d32aa3f7d67b6788ee7a13 812 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 797 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CF65_01391 28674647e6d32aa3f7d67b6788ee7a13 812 PIRSF PIRSF000437 19 811 0.0 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 CF65_00826 be3a84a9c96dd8fef8b0fc94bd8c719a 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 300 9.7E-157 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CF65_00826 be3a84a9c96dd8fef8b0fc94bd8c719a 305 Gene3D G3DSA:3.30.230.20 1 128 5.6E-51 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CF65_00826 be3a84a9c96dd8fef8b0fc94bd8c719a 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.913 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CF65_00826 be3a84a9c96dd8fef8b0fc94bd8c719a 305 Gene3D G3DSA:3.30.1700.10 129 305 3.2E-71 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CF65_00826 be3a84a9c96dd8fef8b0fc94bd8c719a 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 6.2E-110 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CF65_00826 be3a84a9c96dd8fef8b0fc94bd8c719a 305 SUPERFAMILY SSF54211 3 126 1.06E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_00826 be3a84a9c96dd8fef8b0fc94bd8c719a 305 SUPERFAMILY SSF54211 135 278 1.67E-54 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_01695 8b5550a3090769da9f38d08eb8f21169 590 Gene3D G3DSA:3.40.50.2300 495 585 7.1E-19 T 14-10-2018 CF65_01695 8b5550a3090769da9f38d08eb8f21169 590 PIRSF PIRSF037343 1 588 2.1E-289 T 14-10-2018 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted CF65_01695 8b5550a3090769da9f38d08eb8f21169 590 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 496 570 9.6E-12 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CF65_01695 8b5550a3090769da9f38d08eb8f21169 590 Pfam PF03611 PTS system sugar-specific permease component 10 412 4.4E-118 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CF65_01695 8b5550a3090769da9f38d08eb8f21169 590 SUPERFAMILY SSF52794 495 587 1.15E-15 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CF65_00196 684eaf1a1c41517216dc733e07f3e101 186 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 180 15.556 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 CF65_00196 684eaf1a1c41517216dc733e07f3e101 186 Pfam PF04220 Der GTPase activator (YihI) 28 177 2.4E-54 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 CF65_01001 0b03b206d7a13ac80a0b1c1d7d1cc699 297 Pfam PF04245 37-kD nucleoid-associated bacterial protein 1 286 6.8E-90 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CF65_01568 c55f5177f0293a9593517cbfef19909c 272 SMART SM00382 37 226 1.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01568 c55f5177f0293a9593517cbfef19909c 272 Pfam PF00005 ABC transporter 29 175 6.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01568 c55f5177f0293a9593517cbfef19909c 272 Gene3D G3DSA:3.40.50.300 2 269 1.6E-64 T 14-10-2018 CF65_01568 c55f5177f0293a9593517cbfef19909c 272 SUPERFAMILY SSF52540 2 249 1.42E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00644 bf48c30b01ade6e15f5a4c1b9f41e053 169 SUPERFAMILY SSF54001 55 168 5.4E-38 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CF65_00644 bf48c30b01ade6e15f5a4c1b9f41e053 169 Gene3D G3DSA:3.90.1720.10 52 169 2.6E-40 T 14-10-2018 CF65_00644 bf48c30b01ade6e15f5a4c1b9f41e053 169 Pfam PF00877 NlpC/P60 family 66 167 1.1E-30 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain CF65_00167 e1893359f46e15932d396a54a3ce575b 457 PRINTS PR00175 Sodium/alanine symporter signature 411 431 7.4E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CF65_00167 e1893359f46e15932d396a54a3ce575b 457 PRINTS PR00175 Sodium/alanine symporter signature 306 324 7.4E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CF65_00167 e1893359f46e15932d396a54a3ce575b 457 PRINTS PR00175 Sodium/alanine symporter signature 183 201 7.4E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CF65_00167 e1893359f46e15932d396a54a3ce575b 457 PRINTS PR00175 Sodium/alanine symporter signature 352 374 7.4E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CF65_00167 e1893359f46e15932d396a54a3ce575b 457 PRINTS PR00175 Sodium/alanine symporter signature 91 113 7.4E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CF65_00167 e1893359f46e15932d396a54a3ce575b 457 PRINTS PR00175 Sodium/alanine symporter signature 211 230 7.4E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CF65_00167 e1893359f46e15932d396a54a3ce575b 457 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 91 106 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CF65_00167 e1893359f46e15932d396a54a3ce575b 457 TIGRFAM TIGR00835 agcS: amino acid carrier protein 15 442 2.1E-169 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CF65_00167 e1893359f46e15932d396a54a3ce575b 457 Pfam PF01235 Sodium:alanine symporter family 57 450 2.2E-148 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CF65_01983 2d5535d34d00f3f5b225b263da4b9438 904 SUPERFAMILY SSF48452 445 807 4.02E-137 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_01983 2d5535d34d00f3f5b225b263da4b9438 904 Gene3D G3DSA:1.25.40.10 443 809 2.3E-76 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_01983 2d5535d34d00f3f5b225b263da4b9438 904 ProSitePatterns PS00622 LuxR-type HTH domain signature. 854 881 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CF65_01983 2d5535d34d00f3f5b225b263da4b9438 904 SUPERFAMILY SSF46894 831 894 1.12E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CF65_01983 2d5535d34d00f3f5b225b263da4b9438 904 SMART SM00421 837 894 4.1E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CF65_01983 2d5535d34d00f3f5b225b263da4b9438 904 Gene3D G3DSA:3.40.50.300 15 159 2.8E-6 T 14-10-2018 CF65_01983 2d5535d34d00f3f5b225b263da4b9438 904 SUPERFAMILY SSF52540 12 229 1.76E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01983 2d5535d34d00f3f5b225b263da4b9438 904 Gene3D G3DSA:1.10.10.10 810 898 2.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01983 2d5535d34d00f3f5b225b263da4b9438 904 Pfam PF00196 Bacterial regulatory proteins, luxR family 839 893 1.0E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CF65_01983 2d5535d34d00f3f5b225b263da4b9438 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 870 882 2.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CF65_01983 2d5535d34d00f3f5b225b263da4b9438 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 854 870 2.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CF65_01983 2d5535d34d00f3f5b225b263da4b9438 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 840 854 2.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CF65_00596 16484531c63a385bd4af5e8fd16b997f 194 Pfam PF00696 Amino acid kinase family 4 173 1.7E-22 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CF65_00596 16484531c63a385bd4af5e8fd16b997f 194 Gene3D G3DSA:3.40.1160.10 1 194 9.7E-62 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CF65_00596 16484531c63a385bd4af5e8fd16b997f 194 Hamap MF_01220_B Uridylate kinase [pyrH]. 1 194 31.694 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CF65_00596 16484531c63a385bd4af5e8fd16b997f 194 PIRSF PIRSF005650 1 194 2.6E-74 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CF65_00596 16484531c63a385bd4af5e8fd16b997f 194 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 1 194 1.6E-86 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CF65_00596 16484531c63a385bd4af5e8fd16b997f 194 SUPERFAMILY SSF53633 2 193 2.75E-57 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CF65_00229 722b2d9ba1db3a94b9382399c3a0b4fa 1123 Gene3D G3DSA:3.20.20.140 1 234 4.1E-73 T 14-10-2018 CF65_00229 722b2d9ba1db3a94b9382399c3a0b4fa 1123 Gene3D G3DSA:2.40.50.140 949 1037 3.1E-8 T 14-10-2018 CF65_00229 722b2d9ba1db3a94b9382399c3a0b4fa 1123 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 1 994 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00229 722b2d9ba1db3a94b9382399c3a0b4fa 1123 SUPERFAMILY SSF53098 43 216 9.1E-6 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_00229 722b2d9ba1db3a94b9382399c3a0b4fa 1123 Pfam PF02811 PHP domain 1 136 8.3E-27 T 14-10-2018 IPR004013 PHP domain GO:0003824 CF65_00229 722b2d9ba1db3a94b9382399c3a0b4fa 1123 Pfam PF01336 OB-fold nucleic acid binding domain 961 1031 6.7E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CF65_00229 722b2d9ba1db3a94b9382399c3a0b4fa 1123 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 255 699 2.2E-177 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00229 722b2d9ba1db3a94b9382399c3a0b4fa 1123 Gene3D G3DSA:1.10.10.1600 397 474 2.4E-34 T 14-10-2018 CF65_00229 722b2d9ba1db3a94b9382399c3a0b4fa 1123 Pfam PF14579 Helix-hairpin-helix motif 772 861 1.5E-25 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00171 74b14557822afab789d561874fbdd5ae 103 Pfam PF02954 Bacterial regulatory protein, Fis family 60 100 3.5E-16 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CF65_00171 74b14557822afab789d561874fbdd5ae 103 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 66 83 2.4E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CF65_00171 74b14557822afab789d561874fbdd5ae 103 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 83 103 2.4E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CF65_00171 74b14557822afab789d561874fbdd5ae 103 PRINTS PR01591 DNA-binding protein FIS signature 47 62 1.3E-33 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CF65_00171 74b14557822afab789d561874fbdd5ae 103 PRINTS PR01591 DNA-binding protein FIS signature 31 47 1.3E-33 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CF65_00171 74b14557822afab789d561874fbdd5ae 103 PRINTS PR01591 DNA-binding protein FIS signature 14 31 1.3E-33 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CF65_00171 74b14557822afab789d561874fbdd5ae 103 PRINTS PR01591 DNA-binding protein FIS signature 62 74 1.3E-33 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CF65_00171 74b14557822afab789d561874fbdd5ae 103 PIRSF PIRSF002097 5 103 1.9E-44 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CF65_00171 74b14557822afab789d561874fbdd5ae 103 SUPERFAMILY SSF46689 11 102 5.73E-26 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_00171 74b14557822afab789d561874fbdd5ae 103 Gene3D G3DSA:1.10.10.60 6 102 2.5E-33 T 14-10-2018 CF65_00171 74b14557822afab789d561874fbdd5ae 103 Hamap MF_00166 DNA-binding protein Fis [fis]. 5 103 30.049 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CF65_01772 16522ed4e445e0af64bcb356b953ff7f 271 Gene3D G3DSA:3.40.50.10860 1 100 6.7E-36 T 14-10-2018 CF65_01772 16522ed4e445e0af64bcb356b953ff7f 271 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 22 90 3.7E-18 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CF65_01772 16522ed4e445e0af64bcb356b953ff7f 271 SUPERFAMILY SSF53223 3 102 2.59E-27 T 14-10-2018 CF65_01772 16522ed4e445e0af64bcb356b953ff7f 271 Gene3D G3DSA:3.40.50.720 101 271 1.9E-47 T 14-10-2018 CF65_01772 16522ed4e445e0af64bcb356b953ff7f 271 SUPERFAMILY SSF51735 103 264 2.05E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02790 f40af1bb2bdee1f1956c1a6a4f7673c4 502 Gene3D G3DSA:3.40.605.10 24 462 1.4E-135 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CF65_02790 f40af1bb2bdee1f1956c1a6a4f7673c4 502 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 486 4.0E-192 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 CF65_02790 f40af1bb2bdee1f1956c1a6a4f7673c4 502 Pfam PF00171 Aldehyde dehydrogenase family 19 482 2.5E-126 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CF65_02790 f40af1bb2bdee1f1956c1a6a4f7673c4 502 Gene3D G3DSA:3.40.309.10 249 455 1.4E-135 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CF65_02790 f40af1bb2bdee1f1956c1a6a4f7673c4 502 SUPERFAMILY SSF53720 3 488 4.45E-135 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CF65_02790 f40af1bb2bdee1f1956c1a6a4f7673c4 502 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CF65_00306 8ad794edffc278f5f5256542f0b7195a 112 SUPERFAMILY SSF54913 1 112 9.21E-47 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CF65_00306 8ad794edffc278f5f5256542f0b7195a 112 SMART SM00938 4 105 1.7E-68 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CF65_00306 8ad794edffc278f5f5256542f0b7195a 112 PRINTS PR00340 P-II protein signature 83 103 1.3E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CF65_00306 8ad794edffc278f5f5256542f0b7195a 112 PRINTS PR00340 P-II protein signature 23 41 1.3E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CF65_00306 8ad794edffc278f5f5256542f0b7195a 112 PRINTS PR00340 P-II protein signature 52 75 1.3E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CF65_00306 8ad794edffc278f5f5256542f0b7195a 112 PRINTS PR00340 P-II protein signature 2 17 1.3E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CF65_00306 8ad794edffc278f5f5256542f0b7195a 112 Gene3D G3DSA:3.30.70.120 1 112 1.2E-47 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CF65_00306 8ad794edffc278f5f5256542f0b7195a 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CF65_00306 8ad794edffc278f5f5256542f0b7195a 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.2E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CF65_00306 8ad794edffc278f5f5256542f0b7195a 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CF65_00306 8ad794edffc278f5f5256542f0b7195a 112 PIRSF PIRSF039144 1 112 1.3E-57 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CF65_02845 43f184905df639231580f19a2493e308 204 Gene3D G3DSA:1.10.8.10 157 204 2.7E-22 T 14-10-2018 CF65_02845 43f184905df639231580f19a2493e308 204 Pfam PF01330 RuvA N terminal domain 1 62 4.6E-19 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CF65_02845 43f184905df639231580f19a2493e308 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 1.8E-70 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CF65_02845 43f184905df639231580f19a2493e308 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.611 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CF65_02845 43f184905df639231580f19a2493e308 204 Gene3D G3DSA:2.40.50.140 1 66 1.6E-25 T 14-10-2018 CF65_02845 43f184905df639231580f19a2493e308 204 Gene3D G3DSA:1.10.150.20 67 142 5.1E-28 T 14-10-2018 CF65_02845 43f184905df639231580f19a2493e308 204 SUPERFAMILY SSF47781 67 140 1.31E-22 T 14-10-2018 IPR010994 RuvA domain 2-like CF65_02845 43f184905df639231580f19a2493e308 204 SUPERFAMILY SSF46929 161 202 1.23E-10 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily CF65_02845 43f184905df639231580f19a2493e308 204 Pfam PF07499 RuvA, C-terminal domain 161 202 1.8E-15 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CF65_02845 43f184905df639231580f19a2493e308 204 Pfam PF14520 Helix-hairpin-helix domain 72 129 1.3E-17 T 14-10-2018 CF65_02845 43f184905df639231580f19a2493e308 204 SMART SM00278 73 92 0.18 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CF65_02845 43f184905df639231580f19a2493e308 204 SMART SM00278 108 127 0.0053 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CF65_02845 43f184905df639231580f19a2493e308 204 SUPERFAMILY SSF50249 1 63 9.71E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01524 565c90e46d99cf6a32def6901a792741 255 PIRSF PIRSF039085 1 247 8.5E-105 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CF65_01524 565c90e46d99cf6a32def6901a792741 255 SUPERFAMILY SSF52540 1 241 8.57E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01524 565c90e46d99cf6a32def6901a792741 255 Gene3D G3DSA:3.40.50.300 1 250 1.5E-76 T 14-10-2018 CF65_01524 565c90e46d99cf6a32def6901a792741 255 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01524 565c90e46d99cf6a32def6901a792741 255 SMART SM00382 26 219 1.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01524 565c90e46d99cf6a32def6901a792741 255 Pfam PF00005 ABC transporter 17 171 5.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02063 4fc94f2d42f446becf780959bc02eac3 229 Gene3D G3DSA:3.30.2350.10 3 199 1.8E-49 T 14-10-2018 CF65_02063 4fc94f2d42f446becf780959bc02eac3 229 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 7 202 3.4E-96 T 14-10-2018 IPR006508 Pseudouridine synthase, RluA-like CF65_02063 4fc94f2d42f446becf780959bc02eac3 229 Pfam PF00849 RNA pseudouridylate synthase 15 158 3.7E-23 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02063 4fc94f2d42f446becf780959bc02eac3 229 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 52 66 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02063 4fc94f2d42f446becf780959bc02eac3 229 SUPERFAMILY SSF55120 7 189 9.76E-49 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_00553 3d8818ded219de891f0c4b9b27016d6a 94 Hamap MF_02200 Chaperone NapD [napD]. 15 92 16.979 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly CF65_00553 3d8818ded219de891f0c4b9b27016d6a 94 Gene3D G3DSA:3.30.70.920 15 85 1.4E-21 T 14-10-2018 CF65_00553 3d8818ded219de891f0c4b9b27016d6a 94 Pfam PF03927 NapD protein 15 91 6.9E-23 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 7 556 52.418 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 Gene3D G3DSA:2.40.240.10 470 554 6.5E-31 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 Gene3D G3DSA:2.40.240.10 356 469 7.4E-45 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 348 535 1.4E-60 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 Gene3D G3DSA:1.10.1160.10 269 347 1.2E-33 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 35 345 2.8E-123 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 Gene3D G3DSA:3.90.800.10 108 216 6.4E-106 T 14-10-2018 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 50 3.6E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 52 63 3.6E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 67 80 3.6E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 217 227 3.6E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 Gene3D G3DSA:3.40.50.620 37 254 6.4E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 SUPERFAMILY SSF50715 348 554 1.83E-76 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 SUPERFAMILY SSF52374 35 354 1.84E-101 T 14-10-2018 CF65_02082 b44ccbdc9ec889266c5fe7b888098620 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 35 556 0.0 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CF65_02678 581bdef603d5175dc3bb4a4a3dee2d4e 141 SUPERFAMILY SSF81342 12 141 1.73E-28 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CF65_02678 581bdef603d5175dc3bb4a4a3dee2d4e 141 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 13 141 1.1E-49 T 14-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CF65_02678 581bdef603d5175dc3bb4a4a3dee2d4e 141 Pfam PF01292 Prokaryotic cytochrome b561 16 141 7.8E-15 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CF65_02678 581bdef603d5175dc3bb4a4a3dee2d4e 141 Gene3D G3DSA:1.20.950.20 8 141 1.9E-39 T 14-10-2018 CF65_00579 589f79053c6d791f1e76ccaf09a76676 537 Pfam PF02646 RmuC family 216 511 4.3E-92 T 14-10-2018 IPR003798 DNA recombination RmuC CF65_01861 c9db21e82bea2b2a6b5e1395228da9d1 74 Pfam PF08543 Phosphomethylpyrimidine kinase 14 72 5.1E-11 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CF65_01861 c9db21e82bea2b2a6b5e1395228da9d1 74 Gene3D G3DSA:3.40.1190.20 1 74 1.3E-14 T 14-10-2018 IPR029056 Ribokinase-like CF65_01861 c9db21e82bea2b2a6b5e1395228da9d1 74 SUPERFAMILY SSF53613 5 72 2.06E-7 T 14-10-2018 IPR029056 Ribokinase-like CF65_00077 61989c514d8a3b1936e85070b04ac2e0 448 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 1 439 45.269 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 CF65_00077 61989c514d8a3b1936e85070b04ac2e0 448 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 17 237 3.3E-29 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CF65_00077 61989c514d8a3b1936e85070b04ac2e0 448 Gene3D G3DSA:1.10.530.10 262 422 6.3E-35 T 14-10-2018 CF65_00077 61989c514d8a3b1936e85070b04ac2e0 448 SUPERFAMILY SSF53955 269 428 2.02E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily CF65_00077 61989c514d8a3b1936e85070b04ac2e0 448 SUPERFAMILY SSF53850 17 238 1.04E-33 T 14-10-2018 CF65_00077 61989c514d8a3b1936e85070b04ac2e0 448 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 280 308 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CF65_00077 61989c514d8a3b1936e85070b04ac2e0 448 Pfam PF01464 Transglycosylase SLT domain 268 372 4.8E-27 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 CF65_00077 61989c514d8a3b1936e85070b04ac2e0 448 SMART SM00062 16 239 1.4E-27 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CF65_00077 61989c514d8a3b1936e85070b04ac2e0 448 Gene3D G3DSA:3.40.190.10 101 195 1.8E-57 T 14-10-2018 CF65_00077 61989c514d8a3b1936e85070b04ac2e0 448 Gene3D G3DSA:3.40.190.10 11 234 1.8E-57 T 14-10-2018 CF65_00270 406b14feefc50b08c99383a15bebd295 307 SUPERFAMILY SSF52151 1 306 4.97E-80 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CF65_00270 406b14feefc50b08c99383a15bebd295 307 Pfam PF00698 Acyl transferase domain 2 292 2.6E-42 T 14-10-2018 IPR014043 Acyl transferase CF65_00270 406b14feefc50b08c99383a15bebd295 307 PIRSF PIRSF000446 1 307 1.7E-140 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CF65_00270 406b14feefc50b08c99383a15bebd295 307 SUPERFAMILY SSF55048 124 193 5.89E-18 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CF65_00270 406b14feefc50b08c99383a15bebd295 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 287 2.0E-131 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CF65_00270 406b14feefc50b08c99383a15bebd295 307 Gene3D G3DSA:3.40.366.10 1 282 4.7E-105 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 CF65_00270 406b14feefc50b08c99383a15bebd295 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2 296 1.4E-37 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain CF65_00270 406b14feefc50b08c99383a15bebd295 307 Gene3D G3DSA:3.30.70.250 121 193 4.7E-105 T 14-10-2018 CF65_01511 e15337609ba6454f4ead0925fa10727d 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 59 1.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CF65_01511 e15337609ba6454f4ead0925fa10727d 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CF65_01511 e15337609ba6454f4ead0925fa10727d 206 SUPERFAMILY SSF46689 3 78 3.95E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01511 e15337609ba6454f4ead0925fa10727d 206 Gene3D G3DSA:1.10.357.10 54 203 4.7E-34 T 14-10-2018 CF65_01511 e15337609ba6454f4ead0925fa10727d 206 Gene3D G3DSA:1.10.10.60 1 53 8.3E-23 T 14-10-2018 CF65_02513 7946097f528e39a7192fa0b60f53f98d 205 Pfam PF17206 SeqA protein N-terminal domain 1 36 1.9E-23 T 14-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal CF65_02513 7946097f528e39a7192fa0b60f53f98d 205 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 202 43.265 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CF65_02513 7946097f528e39a7192fa0b60f53f98d 205 Gene3D G3DSA:1.20.1380.10 88 200 1.7E-43 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 CF65_02513 7946097f528e39a7192fa0b60f53f98d 205 SUPERFAMILY SSF82808 87 200 1.18E-44 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 CF65_02513 7946097f528e39a7192fa0b60f53f98d 205 PIRSF PIRSF019401 1 204 9.7E-57 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CF65_02513 7946097f528e39a7192fa0b60f53f98d 205 Pfam PF03925 SeqA protein C-terminal domain 92 199 4.8E-47 T 14-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CF65_02513 7946097f528e39a7192fa0b60f53f98d 205 SUPERFAMILY SSF47598 1 35 6.89E-13 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 CF65_02513 7946097f528e39a7192fa0b60f53f98d 205 Gene3D G3DSA:1.10.1220.10 1 40 1.3E-21 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CF65_01748 7315dd4c26d6f1415b93269c5f899921 223 Gene3D G3DSA:3.40.30.10 37 223 2.3E-24 T 14-10-2018 CF65_01748 7315dd4c26d6f1415b93269c5f899921 223 SUPERFAMILY SSF52833 39 220 2.24E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_02168 594cecc4c9bc2439831380bfb5d48f58 291 Pfam PF01435 Peptidase family M48 74 288 2.0E-42 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CF65_02168 594cecc4c9bc2439831380bfb5d48f58 291 Hamap MF_00188 Protease HtpX [htpX]. 1 288 25.906 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CF65_02168 594cecc4c9bc2439831380bfb5d48f58 291 Gene3D G3DSA:3.30.2010.10 64 157 6.4E-35 T 14-10-2018 CF65_01837 900fd22ac31971ee2f14d3baf50c1a19 289 Pfam PF00072 Response regulator receiver domain 3 112 1.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CF65_01837 900fd22ac31971ee2f14d3baf50c1a19 289 SUPERFAMILY SSF52172 1 125 3.42E-36 T 14-10-2018 IPR011006 CheY-like superfamily CF65_01837 900fd22ac31971ee2f14d3baf50c1a19 289 Gene3D G3DSA:3.40.50.2300 1 122 3.1E-38 T 14-10-2018 CF65_01837 900fd22ac31971ee2f14d3baf50c1a19 289 Pfam PF04448 Protein of unknown function (DUF551) 224 288 1.9E-11 T 14-10-2018 IPR007539 Domain of unknown function DUF551 CF65_01837 900fd22ac31971ee2f14d3baf50c1a19 289 SMART SM00448 1 112 4.2E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CF65_01411 4f30c89c7e27f5a95f499b0473a2ac83 246 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 246 39.031 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CF65_01411 4f30c89c7e27f5a95f499b0473a2ac83 246 Gene3D G3DSA:3.40.1210.10 1 246 1.7E-94 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CF65_01411 4f30c89c7e27f5a95f499b0473a2ac83 246 SUPERFAMILY SSF64167 1 244 1.31E-84 T 14-10-2018 CF65_01411 4f30c89c7e27f5a95f499b0473a2ac83 246 Pfam PF01975 Survival protein SurE 3 180 2.1E-59 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CF65_01411 4f30c89c7e27f5a95f499b0473a2ac83 246 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 231 1.4E-67 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CF65_02193 df3bff5eabd18b57307a06015831941b 88 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 6 85 6.1E-21 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 CF65_02193 df3bff5eabd18b57307a06015831941b 88 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 82 9.8E-20 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 CF65_02193 df3bff5eabd18b57307a06015831941b 88 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 88 33.998 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 CF65_01561 a743968b31ed1dca779b2b5bc53e7425 129 SUPERFAMILY SSF55298 1 128 1.32E-42 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CF65_01561 a743968b31ed1dca779b2b5bc53e7425 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 CF65_01561 a743968b31ed1dca779b2b5bc53e7425 129 Gene3D G3DSA:3.30.1330.40 1 129 1.1E-47 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CF65_01561 a743968b31ed1dca779b2b5bc53e7425 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.7E-51 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 CF65_01561 a743968b31ed1dca779b2b5bc53e7425 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 1.4E-42 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CF65_00212 3e7a455aac405bd118bc6771e9702fcf 304 Hamap MF_01987 Ribokinase [rbsK]. 1 299 23.794 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CF65_00212 3e7a455aac405bd118bc6771e9702fcf 304 SUPERFAMILY SSF53613 1 300 5.14E-80 T 14-10-2018 IPR029056 Ribokinase-like CF65_00212 3e7a455aac405bd118bc6771e9702fcf 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 244 257 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CF65_00212 3e7a455aac405bd118bc6771e9702fcf 304 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 1 295 2.8E-108 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CF65_00212 3e7a455aac405bd118bc6771e9702fcf 304 Pfam PF00294 pfkB family carbohydrate kinase 1 292 3.9E-69 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB CF65_00212 3e7a455aac405bd118bc6771e9702fcf 304 PRINTS PR00990 Ribokinase signature 1 22 2.2E-32 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CF65_00212 3e7a455aac405bd118bc6771e9702fcf 304 PRINTS PR00990 Ribokinase signature 171 186 2.2E-32 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CF65_00212 3e7a455aac405bd118bc6771e9702fcf 304 PRINTS PR00990 Ribokinase signature 215 226 2.2E-32 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CF65_00212 3e7a455aac405bd118bc6771e9702fcf 304 PRINTS PR00990 Ribokinase signature 28 47 2.2E-32 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CF65_00212 3e7a455aac405bd118bc6771e9702fcf 304 PRINTS PR00990 Ribokinase signature 103 116 2.2E-32 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CF65_00212 3e7a455aac405bd118bc6771e9702fcf 304 Gene3D G3DSA:3.40.1190.20 1 297 1.8E-96 T 14-10-2018 IPR029056 Ribokinase-like CF65_02731 111849d2405ede9ae02b1f0fc2a12c4a 205 SUPERFAMILY SSF89392 27 203 1.22E-56 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CF65_02731 111849d2405ede9ae02b1f0fc2a12c4a 205 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 202 31.608 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CF65_02731 111849d2405ede9ae02b1f0fc2a12c4a 205 Gene3D G3DSA:2.50.20.10 22 203 2.1E-50 T 14-10-2018 CF65_02731 111849d2405ede9ae02b1f0fc2a12c4a 205 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 34 192 8.2E-58 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CF65_02731 111849d2405ede9ae02b1f0fc2a12c4a 205 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 204 2.6E-101 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CF65_01678 1a3fd05dc606c35e7a67c747b8fc698e 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 155 5.3E-56 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CF65_01678 1a3fd05dc606c35e7a67c747b8fc698e 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 8.8E-24 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CF65_01678 1a3fd05dc606c35e7a67c747b8fc698e 159 PIRSF PIRSF006181 1 159 1.5E-58 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CF65_01678 1a3fd05dc606c35e7a67c747b8fc698e 159 Gene3D G3DSA:3.90.960.10 1 158 2.1E-65 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CF65_01678 1a3fd05dc606c35e7a67c747b8fc698e 159 SUPERFAMILY SSF55826 2 155 1.03E-46 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 Gene3D G3DSA:2.30.30.840 507 565 1.7E-237 T 14-10-2018 CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 SUPERFAMILY SSF52540 806 1014 8.62E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 SUPERFAMILY SSF52540 381 490 3.9E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 Gene3D G3DSA:3.90.1150.50 1028 1171 2.1E-38 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 SUPERFAMILY SSF143517 1019 1169 4.84E-39 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 SMART SM01058 503 600 1.5E-48 T 14-10-2018 IPR003711 CarD-like/TRCF domain CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 172 1105 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 SUPERFAMILY SSF52540 547 807 8.22E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 Gene3D G3DSA:3.40.50.300 502 1014 1.7E-237 T 14-10-2018 CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 Pfam PF00271 Helicase conserved C-terminal domain 830 933 8.8E-16 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 Gene3D G3DSA:3.30.2060.10 154 239 1.9E-116 T 14-10-2018 CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 SMART SM00487 624 814 7.1E-37 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 SMART SM00490 850 934 7.7E-18 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 Gene3D G3DSA:3.40.50.300 566 805 1.7E-237 T 14-10-2018 CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 SUPERFAMILY SSF141259 494 572 1.44E-24 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 SMART SM00982 1032 1132 6.9E-42 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 57 1136 27.846 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 SUPERFAMILY SSF52540 30 367 4.07E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 Gene3D G3DSA:3.40.50.11140 381 477 1.2E-31 T 14-10-2018 CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 Pfam PF03461 TRCF domain 1033 1124 6.2E-24 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 Pfam PF00270 DEAD/DEAH box helicase 632 789 1.3E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 Gene3D G3DSA:3.40.50.11180 48 359 1.9E-116 T 14-10-2018 CF65_00861 e79051f30a128fc594ff4a6c63d7c0f4 1173 Pfam PF02559 CarD-like/TRCF domain 504 599 3.9E-25 T 14-10-2018 IPR003711 CarD-like/TRCF domain CF65_00770 f82e85cd677474797b852146836a9300 215 Pfam PF03922 OmpW family 23 215 8.3E-52 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CF65_00770 f82e85cd677474797b852146836a9300 215 Gene3D G3DSA:2.40.160.20 22 215 2.5E-58 T 14-10-2018 CF65_00770 f82e85cd677474797b852146836a9300 215 SUPERFAMILY SSF56925 23 215 3.14E-27 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CF65_02883 c10a885e85aa92165a30c8ae8b07b2a1 310 SUPERFAMILY SSF103481 198 299 5.49E-5 T 14-10-2018 CF65_02883 c10a885e85aa92165a30c8ae8b07b2a1 310 SUPERFAMILY SSF103481 42 142 1.83E-11 T 14-10-2018 CF65_02883 c10a885e85aa92165a30c8ae8b07b2a1 310 Pfam PF00892 EamA-like transporter family 7 141 1.5E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_02883 c10a885e85aa92165a30c8ae8b07b2a1 310 Pfam PF00892 EamA-like transporter family 157 296 2.2E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_00363 73bba00aab331cf5ccc0802ba515467d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 6.1E-51 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00363 73bba00aab331cf5ccc0802ba515467d 110 SUPERFAMILY SSF54843 1 109 1.16E-42 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 CF65_00363 73bba00aab331cf5ccc0802ba515467d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00363 73bba00aab331cf5ccc0802ba515467d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.937 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00363 73bba00aab331cf5ccc0802ba515467d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 5.3E-38 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CF65_00363 73bba00aab331cf5ccc0802ba515467d 110 Gene3D G3DSA:3.90.470.10 1 110 8.0E-47 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 CF65_00029 0feff697751d4afb0b696e94e4a3c0f0 546 Pfam PF01555 DNA methylase 65 402 1.1E-37 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CF65_00029 0feff697751d4afb0b696e94e4a3c0f0 546 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 68 74 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CF65_00029 0feff697751d4afb0b696e94e4a3c0f0 546 PIRSF PIRSF015855 3 541 4.6E-110 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CF65_00029 0feff697751d4afb0b696e94e4a3c0f0 546 SUPERFAMILY SSF53335 40 413 2.01E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00029 0feff697751d4afb0b696e94e4a3c0f0 546 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 358 376 6.8E-15 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CF65_00029 0feff697751d4afb0b696e94e4a3c0f0 546 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 124 144 6.8E-15 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CF65_00029 0feff697751d4afb0b696e94e4a3c0f0 546 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 387 407 6.8E-15 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CF65_00029 0feff697751d4afb0b696e94e4a3c0f0 546 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 64 78 6.8E-15 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CF65_02057 45c036d879e2c017b08d78eeca7dfb24 213 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 194 1.1E-48 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_02057 45c036d879e2c017b08d78eeca7dfb24 213 SMART SM00855 6 160 9.4E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_02057 45c036d879e2c017b08d78eeca7dfb24 213 Gene3D G3DSA:3.40.50.1240 5 213 5.4E-54 T 14-10-2018 IPR029033 Histidine phosphatase superfamily CF65_02057 45c036d879e2c017b08d78eeca7dfb24 213 SUPERFAMILY SSF53254 6 212 3.6E-52 T 14-10-2018 IPR029033 Histidine phosphatase superfamily CF65_02057 45c036d879e2c017b08d78eeca7dfb24 213 PIRSF PIRSF000709 1 174 1.8E-16 T 14-10-2018 CF65_02593 67248384a590bd1da15a84a31e5148bd 163 SUPERFAMILY SSF103247 42 158 5.23E-26 T 14-10-2018 IPR035923 TT1751-like domain superfamily CF65_02593 67248384a590bd1da15a84a31e5148bd 163 Gene3D G3DSA:3.30.310.70 36 161 8.4E-14 T 14-10-2018 IPR035923 TT1751-like domain superfamily CF65_02593 67248384a590bd1da15a84a31e5148bd 163 Pfam PF03625 Domain of unknown function DUF302 71 132 8.5E-15 T 14-10-2018 IPR005180 Domain of unknown function DUF302 CF65_00977 5edb93300a5eda1c4050ef88c5aa23cd 296 Gene3D G3DSA:1.10.10.10 7 92 6.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00977 5edb93300a5eda1c4050ef88c5aa23cd 296 Pfam PF03466 LysR substrate binding domain 93 295 4.5E-35 T 14-10-2018 IPR005119 LysR, substrate-binding CF65_00977 5edb93300a5eda1c4050ef88c5aa23cd 296 SUPERFAMILY SSF53850 96 295 3.08E-35 T 14-10-2018 CF65_00977 5edb93300a5eda1c4050ef88c5aa23cd 296 SUPERFAMILY SSF46785 7 92 7.81E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00977 5edb93300a5eda1c4050ef88c5aa23cd 296 Gene3D G3DSA:3.40.190.290 96 295 1.1E-50 T 14-10-2018 CF65_00977 5edb93300a5eda1c4050ef88c5aa23cd 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_02982 fef463aee0bd288a86e4f0ca2c027fef 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 238 1.5E-112 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 CF65_02982 fef463aee0bd288a86e4f0ca2c027fef 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CF65_02982 fef463aee0bd288a86e4f0ca2c027fef 246 Pfam PF13353 4Fe-4S single cluster domain 16 135 8.0E-20 T 14-10-2018 CF65_02982 fef463aee0bd288a86e4f0ca2c027fef 246 Pfam PF04055 Radical SAM superfamily 25 180 2.5E-31 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CF65_02982 fef463aee0bd288a86e4f0ca2c027fef 246 PIRSF PIRSF000371 1 47 2.6E-11 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CF65_02982 fef463aee0bd288a86e4f0ca2c027fef 246 PIRSF PIRSF000371 44 244 2.2E-47 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CF65_02982 fef463aee0bd288a86e4f0ca2c027fef 246 Gene3D G3DSA:3.20.20.70 2 246 6.5E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02982 fef463aee0bd288a86e4f0ca2c027fef 246 SUPERFAMILY SSF102114 23 221 1.0E-24 T 14-10-2018 CF65_02584 77ed38612a324a8090c2102fb6f8127f 419 Hamap MF_01603 Bifunctional protein HldE [hldE]. 1 417 33.961 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 CF65_02584 77ed38612a324a8090c2102fb6f8127f 419 Pfam PF01467 Cytidylyltransferase-like 288 412 2.2E-13 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CF65_02584 77ed38612a324a8090c2102fb6f8127f 419 SUPERFAMILY SSF53613 2 252 6.39E-49 T 14-10-2018 IPR029056 Ribokinase-like CF65_02584 77ed38612a324a8090c2102fb6f8127f 419 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 276 415 1.8E-62 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 CF65_02584 77ed38612a324a8090c2102fb6f8127f 419 SUPERFAMILY SSF52374 283 414 8.59E-22 T 14-10-2018 CF65_02584 77ed38612a324a8090c2102fb6f8127f 419 Gene3D G3DSA:3.40.50.620 261 418 2.9E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02584 77ed38612a324a8090c2102fb6f8127f 419 Gene3D G3DSA:3.40.1190.20 1 252 2.6E-82 T 14-10-2018 IPR029056 Ribokinase-like CF65_02584 77ed38612a324a8090c2102fb6f8127f 419 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 285 350 3.2E-16 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CF65_02584 77ed38612a324a8090c2102fb6f8127f 419 Pfam PF00294 pfkB family carbohydrate kinase 2 245 5.2E-41 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB CF65_02609 e18933bcde0a6d3cf631bd9638b8315f 553 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02609 e18933bcde0a6d3cf631bd9638b8315f 553 Gene3D G3DSA:3.40.50.300 302 552 2.8E-72 T 14-10-2018 CF65_02609 e18933bcde0a6d3cf631bd9638b8315f 553 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 2 512 3.8E-136 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 CF65_02609 e18933bcde0a6d3cf631bd9638b8315f 553 SUPERFAMILY SSF52540 313 549 3.4E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02609 e18933bcde0a6d3cf631bd9638b8315f 553 Pfam PF00664 ABC transporter transmembrane region 39 246 3.0E-15 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CF65_02609 e18933bcde0a6d3cf631bd9638b8315f 553 Pfam PF00005 ABC transporter 335 481 1.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02609 e18933bcde0a6d3cf631bd9638b8315f 553 SMART SM00382 342 534 3.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02609 e18933bcde0a6d3cf631bd9638b8315f 553 Gene3D G3DSA:1.20.1560.10 2 296 4.0E-28 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_02609 e18933bcde0a6d3cf631bd9638b8315f 553 SUPERFAMILY SSF90123 2 300 5.89E-38 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 1 132 4.4E-43 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 Gene3D G3DSA:1.20.1060.10 511 626 2.0E-40 T 14-10-2018 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 TIGRFAM TIGR00593 pola: DNA polymerase I 1 895 2.3E-277 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 133 233 5.4E-29 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 SUPERFAMILY SSF88723 2 132 1.84E-46 T 14-10-2018 IPR029060 PIN-like domain superfamily CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 Pfam PF01612 3'-5' exonuclease 299 485 1.6E-46 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 ProSitePatterns PS00447 DNA polymerase family A signature. 722 741 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 SUPERFAMILY SSF47807 133 252 1.2E-28 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 Gene3D G3DSA:1.10.150.20 136 215 2.6E-81 T 14-10-2018 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 Gene3D G3DSA:3.30.70.370 632 891 1.3E-112 T 14-10-2018 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 SMART SM00474 299 485 3.5E-48 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 Gene3D G3DSA:3.40.50.1010 1 246 2.6E-81 T 14-10-2018 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 SMART SM00475 1 230 2.4E-103 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 SUPERFAMILY SSF53098 302 485 3.61E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 Gene3D G3DSA:1.10.150.20 677 820 1.3E-112 T 14-10-2018 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 SMART SM00482 654 859 1.5E-116 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 Pfam PF00476 DNA polymerase family A 523 893 1.1E-155 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 Gene3D G3DSA:3.30.420.10 296 510 4.2E-72 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 PRINTS PR00868 DNA-polymerase family A (pol I) signature 842 855 7.2E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 PRINTS PR00868 DNA-polymerase family A (pol I) signature 759 770 7.2E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 PRINTS PR00868 DNA-polymerase family A (pol I) signature 781 792 7.2E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 PRINTS PR00868 DNA-polymerase family A (pol I) signature 668 691 7.2E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 829 7.2E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 PRINTS PR00868 DNA-polymerase family A (pol I) signature 698 711 7.2E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 PRINTS PR00868 DNA-polymerase family A (pol I) signature 623 645 7.2E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 PRINTS PR00868 DNA-polymerase family A (pol I) signature 646 661 7.2E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 PRINTS PR00868 DNA-polymerase family A (pol I) signature 722 747 7.2E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 SUPERFAMILY SSF56672 490 895 2.89E-156 T 14-10-2018 CF65_00531 097fb3b8919132b9e56af36ab8e77523 895 SMART SM00279 135 170 2.3E-14 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CF65_01258 0d878137d5ea0c392af4b4f230f802ff 487 PIRSF PIRSF006247 1 487 1.5E-173 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 CF65_01258 0d878137d5ea0c392af4b4f230f802ff 487 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 83 470 3.4E-114 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 CF65_01258 0d878137d5ea0c392af4b4f230f802ff 487 Pfam PF02386 Cation transport protein 37 481 2.5E-98 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CF65_02576 95261a54749f6dae34e4196cc0b347ae 136 Pfam PF03788 LrgA family 20 111 8.1E-24 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 Gene3D G3DSA:3.30.70.870 313 597 5.8E-130 T 14-10-2018 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 Gene3D G3DSA:2.40.50.250 490 606 5.8E-130 T 14-10-2018 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 Pfam PF00009 Elongation factor Tu GTP binding domain 9 202 6.8E-56 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 Pfam PF00679 Elongation factor G C-terminus 404 483 1.7E-22 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 141 1.7E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 Gene3D G3DSA:3.30.70.240 396 489 5.8E-130 T 14-10-2018 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 Gene3D G3DSA:2.40.30.10 206 306 6.2E-33 T 14-10-2018 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 Pfam PF03144 Elongation factor Tu domain 2 226 296 3.2E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 10 606 2.2E-288 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 Gene3D G3DSA:3.40.50.300 6 205 1.1E-66 T 14-10-2018 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 SUPERFAMILY SSF54980 309 394 1.04E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 SUPERFAMILY SSF54980 405 519 3.64E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 SUPERFAMILY SSF52540 4 214 1.07E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 PRINTS PR00315 GTP-binding elongation factor signature 130 139 3.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 SUPERFAMILY SSF50447 158 306 7.07E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CF65_02344 bc75ec34f42f4ec1d3eb8c1abf590a3e 617 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site CF65_02796 53d563507dfc231ac82a71bf926ea67f 279 SUPERFAMILY SSF46689 8 85 2.87E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_02796 53d563507dfc231ac82a71bf926ea67f 279 Pfam PF01380 SIS domain 140 265 3.0E-19 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CF65_02796 53d563507dfc231ac82a71bf926ea67f 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 79 2.0E-13 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CF65_02796 53d563507dfc231ac82a71bf926ea67f 279 Gene3D G3DSA:1.10.10.10 5 83 3.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02796 53d563507dfc231ac82a71bf926ea67f 279 SUPERFAMILY SSF53697 117 267 8.49E-26 T 14-10-2018 CF65_02796 53d563507dfc231ac82a71bf926ea67f 279 Gene3D G3DSA:3.40.50.10490 108 279 1.5E-30 T 14-10-2018 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 Gene3D G3DSA:3.40.50.620 93 439 6.3E-108 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 108 119 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 Hamap MF_00123 Arginine--tRNA ligase [argS]. 1 563 27.02 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 Gene3D G3DSA:1.10.730.10 440 563 1.1E-34 T 14-10-2018 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 SUPERFAMILY SSF55190 8 82 7.72E-19 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 SUPERFAMILY SSF47323 440 563 1.18E-37 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 SMART SM01016 1 73 1.0E-17 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 563 1.5E-207 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 289 310 5.9E-27 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 115 131 5.9E-27 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 100 115 5.9E-27 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 152 5.9E-27 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 Pfam PF05746 DALR anticodon binding domain 446 563 1.2E-36 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 SUPERFAMILY SSF52374 96 439 2.89E-91 T 14-10-2018 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 11 73 3.5E-16 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 Gene3D G3DSA:3.30.1360.70 1 92 3.3E-27 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 Pfam PF00750 tRNA synthetases class I (R) 86 432 8.8E-166 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CF65_00652 c8f276d97553115873c7f78c2c23f23a 563 SMART SM00836 446 563 1.2E-41 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 Pfam PF00140 Sigma-70 factor, region 1.2 15 40 1.3E-6 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 Gene3D G3DSA:1.10.601.10 13 125 5.1E-28 T 14-10-2018 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 Gene3D G3DSA:1.20.140.160 127 280 1.8E-14 T 14-10-2018 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 250 276 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 280 2.2E-129 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 282 52.752 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 SUPERFAMILY SSF88946 11 122 2.83E-40 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 PRINTS PR00046 Major sigma-70 factor signature 250 265 5.6E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 PRINTS PR00046 Major sigma-70 factor signature 265 276 5.6E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 PRINTS PR00046 Major sigma-70 factor signature 231 243 5.6E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 PRINTS PR00046 Major sigma-70 factor signature 77 90 5.6E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 279 3.6E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 SUPERFAMILY SSF88659 197 279 1.01E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 Pfam PF04542 Sigma-70 region 2 53 122 3.1E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CF65_00560 2e2bbc472219d33a4e4bee2c9629fc4a 282 Pfam PF04545 Sigma-70, region 4 227 277 1.2E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CF65_00740 6b635415d4069faa543660c94c0c95d1 470 Gene3D G3DSA:1.10.4200.10 351 465 1.3E-5 T 14-10-2018 CF65_00740 6b635415d4069faa543660c94c0c95d1 470 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 16 178 2.1E-50 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CF65_00740 6b635415d4069faa543660c94c0c95d1 470 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 142 470 143.527 T 14-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CF65_00740 6b635415d4069faa543660c94c0c95d1 470 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 188 459 9.1E-77 T 14-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CF65_00740 6b635415d4069faa543660c94c0c95d1 470 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 15 178 1.3E-53 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CF65_00740 6b635415d4069faa543660c94c0c95d1 470 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 183 461 3.2E-105 T 14-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CF65_01333 4baf44335e8dbc26f47c1fad1e940229 334 Gene3D G3DSA:3.90.550.20 88 275 7.6E-12 T 14-10-2018 CF65_01333 4baf44335e8dbc26f47c1fad1e940229 334 SUPERFAMILY SSF53448 72 266 7.31E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01333 4baf44335e8dbc26f47c1fad1e940229 334 Pfam PF05704 Capsular polysaccharide synthesis protein 47 328 2.6E-70 T 14-10-2018 IPR008441 Capsular polysaccharide synthesis protein CF65_00426 199885d8339b42d4309cca2a35ecbc2a 33 Pfam PF01078 Magnesium chelatase, subunit ChlI 4 32 2.7E-8 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 4 292 51.659 T 14-10-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 3.3E-106 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 4 291 1.8E-159 T 14-10-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 SUPERFAMILY SSF51569 1 283 1.05E-75 T 14-10-2018 CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 Gene3D G3DSA:3.20.20.70 1 292 7.7E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 SMART SM01130 3 292 1.1E-72 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 PIRSF PIRSF001365 1 291 8.6E-61 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 6.8E-20 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 6.8E-20 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 6.8E-20 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 6.8E-20 T 14-10-2018 IPR002220 DapA-like GO:0016829 CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 166 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CF65_02466 02dc7eac80bf569d761e1dd0041eb151 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_02713 9f6cd09fbdc74a5873eff3c980c94e55 202 SMART SM00945 5 119 1.0E-59 T 14-10-2018 IPR016103 ProQ/FinO domain CF65_02713 9f6cd09fbdc74a5873eff3c980c94e55 202 Gene3D G3DSA:1.10.1710.10 1 120 7.2E-22 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily CF65_02713 9f6cd09fbdc74a5873eff3c980c94e55 202 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 202 29.102 T 14-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 CF65_02713 9f6cd09fbdc74a5873eff3c980c94e55 202 Pfam PF04352 ProQ/FINO family 8 115 1.5E-41 T 14-10-2018 IPR016103 ProQ/FinO domain CF65_02713 9f6cd09fbdc74a5873eff3c980c94e55 202 SUPERFAMILY SSF48657 6 117 2.22E-37 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily CF65_02713 9f6cd09fbdc74a5873eff3c980c94e55 202 Pfam PF17516 ProQ C-terminal domain 152 202 4.7E-20 T 14-10-2018 IPR035236 RNA chaperone ProQ, C-terminal CF65_01043 d97b6bd8759c711c63004949e01f0a0c 92 PIRSF PIRSF029827 1 90 8.9E-44 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CF65_01043 d97b6bd8759c711c63004949e01f0a0c 92 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 3.0E-36 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CF65_01043 d97b6bd8759c711c63004949e01f0a0c 92 SUPERFAMILY SSF111148 1 89 2.22E-40 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 CF65_01043 d97b6bd8759c711c63004949e01f0a0c 92 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.323 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CF65_01043 d97b6bd8759c711c63004949e01f0a0c 92 Gene3D G3DSA:1.10.3880.10 1 92 1.5E-39 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 CF65_01043 d97b6bd8759c711c63004949e01f0a0c 92 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 4.4E-42 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CF65_00043 2403979862825eec757fb08c3680111d 321 Gene3D G3DSA:1.20.1630.10 1 212 5.0E-11 T 14-10-2018 CF65_00043 2403979862825eec757fb08c3680111d 321 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 8 321 6.3E-153 T 14-10-2018 IPR017566 NrfD CF65_00043 2403979862825eec757fb08c3680111d 321 Pfam PF03916 Polysulphide reductase, NrfD 7 321 2.7E-100 T 14-10-2018 IPR005614 NrfD family CF65_01294 bbd956725607a10ff8c7ddc8b56c166d 291 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 26 270 1.6E-72 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CF65_01294 bbd956725607a10ff8c7ddc8b56c166d 291 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 196 202 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CF65_01294 bbd956725607a10ff8c7ddc8b56c166d 291 SUPERFAMILY SSF53335 21 286 2.68E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01294 bbd956725607a10ff8c7ddc8b56c166d 291 PIRSF PIRSF000398 18 290 2.3E-69 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CF65_01294 bbd956725607a10ff8c7ddc8b56c166d 291 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 48 62 1.0E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CF65_01294 bbd956725607a10ff8c7ddc8b56c166d 291 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 67 80 1.0E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CF65_01294 bbd956725607a10ff8c7ddc8b56c166d 291 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 193 205 1.0E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CF65_01294 bbd956725607a10ff8c7ddc8b56c166d 291 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 26 42 1.0E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CF65_01294 bbd956725607a10ff8c7ddc8b56c166d 291 Gene3D G3DSA:1.10.1020.10 74 174 1.6E-83 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 CF65_01294 bbd956725607a10ff8c7ddc8b56c166d 291 TIGRFAM TIGR00571 dam: DNA adenine methylase 21 286 1.1E-101 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CF65_01294 bbd956725607a10ff8c7ddc8b56c166d 291 Gene3D G3DSA:3.40.50.150 23 257 1.6E-83 T 14-10-2018 CF65_00448 9e7355626f26c843d5a523f44df38f52 237 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 19 34 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CF65_00448 9e7355626f26c843d5a523f44df38f52 237 Gene3D G3DSA:3.40.50.300 8 230 4.9E-41 T 14-10-2018 CF65_00448 9e7355626f26c843d5a523f44df38f52 237 SUPERFAMILY SSF52540 14 230 1.83E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00448 9e7355626f26c843d5a523f44df38f52 237 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 131 223 1.1E-31 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CF65_00448 9e7355626f26c843d5a523f44df38f52 237 Pfam PF01078 Magnesium chelatase, subunit ChlI 12 121 7.0E-47 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain CF65_00838 34d1d4fdb3622a58a032f65c5f8d14f1 434 Gene3D G3DSA:3.40.1190.10 93 297 4.8E-71 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CF65_00838 34d1d4fdb3622a58a032f65c5f8d14f1 434 Gene3D G3DSA:3.40.50.720 1 92 2.6E-25 T 14-10-2018 CF65_00838 34d1d4fdb3622a58a032f65c5f8d14f1 434 SUPERFAMILY SSF53623 94 295 3.79E-57 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CF65_00838 34d1d4fdb3622a58a032f65c5f8d14f1 434 SUPERFAMILY SSF53244 297 431 7.78E-43 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CF65_00838 34d1d4fdb3622a58a032f65c5f8d14f1 434 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 367 2.0E-8 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CF65_00838 34d1d4fdb3622a58a032f65c5f8d14f1 434 Gene3D G3DSA:3.90.190.20 298 431 1.5E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CF65_00838 34d1d4fdb3622a58a032f65c5f8d14f1 434 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 7 432 1.7E-137 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_00838 34d1d4fdb3622a58a032f65c5f8d14f1 434 SUPERFAMILY SSF51984 1 93 2.75E-22 T 14-10-2018 CF65_00838 34d1d4fdb3622a58a032f65c5f8d14f1 434 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 6 434 33.103 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_00838 34d1d4fdb3622a58a032f65c5f8d14f1 434 Pfam PF08245 Mur ligase middle domain 109 278 1.6E-30 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CF65_00449 3d5e58cc3e99ca85eb377d784309ed27 278 Gene3D G3DSA:3.20.20.370 25 241 5.0E-68 T 14-10-2018 CF65_00449 3d5e58cc3e99ca85eb377d784309ed27 278 Pfam PF04748 Divergent polysaccharide deacetylase 31 240 5.1E-71 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase CF65_00449 3d5e58cc3e99ca85eb377d784309ed27 278 SUPERFAMILY SSF88713 28 241 2.45E-67 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CF65_02560 b3ce830b33498ff0ac6d5ebe1148e16f 713 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 3 711 0.0 T 14-10-2018 IPR010019 Integral membrane protein, YccS CF65_02560 b3ce830b33498ff0ac6d5ebe1148e16f 713 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 3 711 2.4E-272 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK CF65_02560 b3ce830b33498ff0ac6d5ebe1148e16f 713 Pfam PF13515 Fusaric acid resistance protein-like 396 519 1.0E-26 T 14-10-2018 CF65_02560 b3ce830b33498ff0ac6d5ebe1148e16f 713 Pfam PF12805 FUSC-like inner membrane protein yccS 60 340 2.1E-103 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal CF65_02793 9108dd65761a8263863e9b292cae571e 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site CF65_02793 9108dd65761a8263863e9b292cae571e 267 Gene3D G3DSA:3.40.190.80 147 266 3.8E-20 T 14-10-2018 CF65_02793 9108dd65761a8263863e9b292cae571e 267 Pfam PF00459 Inositol monophosphatase family 11 236 6.3E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_02793 9108dd65761a8263863e9b292cae571e 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 214 228 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CF65_02793 9108dd65761a8263863e9b292cae571e 267 SUPERFAMILY SSF56655 10 238 1.3E-66 T 14-10-2018 CF65_02793 9108dd65761a8263863e9b292cae571e 267 Gene3D G3DSA:3.30.540.10 6 144 1.4E-40 T 14-10-2018 CF65_02793 9108dd65761a8263863e9b292cae571e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 135 158 3.5E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_02793 9108dd65761a8263863e9b292cae571e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 3.5E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_02793 9108dd65761a8263863e9b292cae571e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 44 64 3.5E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_02793 9108dd65761a8263863e9b292cae571e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 66 82 3.5E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_02793 9108dd65761a8263863e9b292cae571e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 3.5E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_02793 9108dd65761a8263863e9b292cae571e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 3.5E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CF65_00366 848232212285ec369d375a7936ca406b 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 116 8.2E-33 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00366 848232212285ec369d375a7936ca406b 273 SUPERFAMILY SSF50249 2 125 4.11E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_00366 848232212285ec369d375a7936ca406b 273 PIRSF PIRSF002158 11 273 4.9E-100 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00366 848232212285ec369d375a7936ca406b 273 SUPERFAMILY SSF50104 126 269 1.14E-59 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily CF65_00366 848232212285ec369d375a7936ca406b 273 SMART SM01383 42 118 4.9E-47 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00366 848232212285ec369d375a7936ca406b 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 4.6E-130 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CF65_00366 848232212285ec369d375a7936ca406b 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00366 848232212285ec369d375a7936ca406b 273 Gene3D G3DSA:4.10.950.10 196 273 3.4E-35 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00366 848232212285ec369d375a7936ca406b 273 Gene3D G3DSA:2.40.50.140 1 114 7.9E-49 T 14-10-2018 CF65_00366 848232212285ec369d375a7936ca406b 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 46.917 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CF65_00366 848232212285ec369d375a7936ca406b 273 Gene3D G3DSA:2.30.30.30 115 195 3.8E-33 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 CF65_00366 848232212285ec369d375a7936ca406b 273 SMART SM01382 124 251 1.7E-90 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CF65_00366 848232212285ec369d375a7936ca406b 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.0E-55 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CF65_01945 275775cad53a8f51d58237b095b2f13d 359 SUPERFAMILY SSF56042 176 351 1.05E-50 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CF65_01945 275775cad53a8f51d58237b095b2f13d 359 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 351 2.5E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain CF65_01945 275775cad53a8f51d58237b095b2f13d 359 Pfam PF00586 AIR synthase related protein, N-terminal domain 62 169 3.1E-19 T 14-10-2018 IPR016188 PurM-like, N-terminal domain CF65_01945 275775cad53a8f51d58237b095b2f13d 359 SUPERFAMILY SSF55326 19 173 1.44E-42 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CF65_01945 275775cad53a8f51d58237b095b2f13d 359 Hamap MF_00625 Selenide, water dikinase [selD]. 17 359 45.824 T 14-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CF65_01945 275775cad53a8f51d58237b095b2f13d 359 Gene3D G3DSA:3.30.1330.10 10 174 2.6E-49 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CF65_01945 275775cad53a8f51d58237b095b2f13d 359 Gene3D G3DSA:3.90.650.10 176 356 1.9E-50 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CF65_01945 275775cad53a8f51d58237b095b2f13d 359 PIRSF PIRSF036407 12 359 3.8E-119 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CF65_01945 275775cad53a8f51d58237b095b2f13d 359 TIGRFAM TIGR00476 selD: selenide, water dikinase 19 325 7.4E-135 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CF65_02013 65b164b9a9cfee3d5c085f42a5fdf413 230 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CF65_02013 65b164b9a9cfee3d5c085f42a5fdf413 230 SMART SM00947 30 192 6.2E-66 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CF65_02013 65b164b9a9cfee3d5c085f42a5fdf413 230 SUPERFAMILY SSF53056 2 211 4.45E-74 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CF65_02013 65b164b9a9cfee3d5c085f42a5fdf413 230 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CF65_02013 65b164b9a9cfee3d5c085f42a5fdf413 230 Gene3D G3DSA:3.40.1050.10 1 229 2.4E-96 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CF65_02013 65b164b9a9cfee3d5c085f42a5fdf413 230 Pfam PF00484 Carbonic anhydrase 37 186 4.2E-51 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CF65_02846 5e71f5767d5de81c4b61e76bf84186ad 190 Gene3D G3DSA:3.30.420.10 2 158 1.2E-50 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CF65_02846 5e71f5767d5de81c4b61e76bf84186ad 190 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 159 1.3E-84 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CF65_02846 5e71f5767d5de81c4b61e76bf84186ad 190 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.0E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CF65_02846 5e71f5767d5de81c4b61e76bf84186ad 190 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.0E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CF65_02846 5e71f5767d5de81c4b61e76bf84186ad 190 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.0E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CF65_02846 5e71f5767d5de81c4b61e76bf84186ad 190 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.0E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CF65_02846 5e71f5767d5de81c4b61e76bf84186ad 190 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.0E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CF65_02846 5e71f5767d5de81c4b61e76bf84186ad 190 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CF65_02846 5e71f5767d5de81c4b61e76bf84186ad 190 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.59 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CF65_02846 5e71f5767d5de81c4b61e76bf84186ad 190 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.2E-62 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CF65_02846 5e71f5767d5de81c4b61e76bf84186ad 190 SUPERFAMILY SSF53098 3 156 4.17E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_00715 3b7310180f764a32403a2a57544efb6a 113 SUPERFAMILY SSF54292 7 108 2.08E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CF65_00715 3b7310180f764a32403a2a57544efb6a 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 1.2E-13 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CF65_00715 3b7310180f764a32403a2a57544efb6a 113 Gene3D G3DSA:3.10.20.30 1 113 1.1E-38 T 14-10-2018 IPR012675 Beta-grasp domain superfamily CF65_00715 3b7310180f764a32403a2a57544efb6a 113 PRINTS PR00355 Adrenodoxin signature 60 74 1.8E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CF65_00715 3b7310180f764a32403a2a57544efb6a 113 PRINTS PR00355 Adrenodoxin signature 83 91 1.8E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CF65_00715 3b7310180f764a32403a2a57544efb6a 113 PRINTS PR00355 Adrenodoxin signature 42 52 1.8E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CF65_00715 3b7310180f764a32403a2a57544efb6a 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 4.1E-58 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 CF65_00715 3b7310180f764a32403a2a57544efb6a 113 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CF65_00938 d1ff6258034f866ebebb81dcebdceefe 241 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 13 191 1.4E-23 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CF65_00938 d1ff6258034f866ebebb81dcebdceefe 241 SUPERFAMILY SSF53067 9 232 6.48E-44 T 14-10-2018 CF65_00938 d1ff6258034f866ebebb81dcebdceefe 241 Gene3D G3DSA:3.30.420.40 7 237 9.6E-45 T 14-10-2018 CF65_00938 d1ff6258034f866ebebb81dcebdceefe 241 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 106 126 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CF65_00350 7bbc900cd6fa4d6c3b8b1acf3455691c 163 Gene3D G3DSA:3.30.70.1730 1 124 2.3E-37 T 14-10-2018 CF65_00350 7bbc900cd6fa4d6c3b8b1acf3455691c 163 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 40 159 0.002 T 14-10-2018 CF65_00350 7bbc900cd6fa4d6c3b8b1acf3455691c 163 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 25.668 T 14-10-2018 IPR022973 Ribosomal protein L10 CF65_00350 7bbc900cd6fa4d6c3b8b1acf3455691c 163 SUPERFAMILY SSF160369 4 158 8.5E-48 T 14-10-2018 CF65_00350 7bbc900cd6fa4d6c3b8b1acf3455691c 163 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00350 7bbc900cd6fa4d6c3b8b1acf3455691c 163 Pfam PF00466 Ribosomal protein L10 5 101 7.6E-29 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CF65_00343 9e67bed0983d295fa0d91334ef0e892d 222 Pfam PF03992 Antibiotic biosynthesis monooxygenase 120 192 2.2E-10 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CF65_00343 9e67bed0983d295fa0d91334ef0e892d 222 Pfam PF03992 Antibiotic biosynthesis monooxygenase 10 84 7.9E-9 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CF65_00343 9e67bed0983d295fa0d91334ef0e892d 222 SUPERFAMILY SSF54909 119 206 8.82E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel CF65_00343 9e67bed0983d295fa0d91334ef0e892d 222 Gene3D G3DSA:3.30.70.100 4 220 7.9E-72 T 14-10-2018 CF65_00343 9e67bed0983d295fa0d91334ef0e892d 222 SUPERFAMILY SSF54909 9 101 7.6E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel CF65_02734 ae77f9223adb2b8784d872692dae084a 219 Gene3D G3DSA:1.10.10.10 60 120 7.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02734 ae77f9223adb2b8784d872692dae084a 219 ProSitePatterns PS00519 AsnC-type HTH domain signature. 87 113 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CF65_02734 ae77f9223adb2b8784d872692dae084a 219 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 96 115 1.6E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CF65_02734 ae77f9223adb2b8784d872692dae084a 219 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 85 96 1.6E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CF65_02734 ae77f9223adb2b8784d872692dae084a 219 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 69 85 1.6E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CF65_02734 ae77f9223adb2b8784d872692dae084a 219 Pfam PF13412 Winged helix-turn-helix DNA-binding 69 115 5.5E-20 T 14-10-2018 CF65_02734 ae77f9223adb2b8784d872692dae084a 219 Pfam PF01037 Lrp/AsnC ligand binding domain 135 209 2.0E-24 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CF65_02734 ae77f9223adb2b8784d872692dae084a 219 Gene3D G3DSA:3.30.70.920 121 216 3.7E-24 T 14-10-2018 CF65_02734 ae77f9223adb2b8784d872692dae084a 219 SUPERFAMILY SSF54909 131 216 1.88E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel CF65_02734 ae77f9223adb2b8784d872692dae084a 219 SUPERFAMILY SSF46785 68 127 1.9E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_02734 ae77f9223adb2b8784d872692dae084a 219 SMART SM00344 69 178 1.1E-50 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 480 6.9E-173 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 SUPERFAMILY SSF52935 329 480 4.71E-37 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 Gene3D G3DSA:3.40.1380.20 342 474 6.5E-154 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 Gene3D G3DSA:2.40.33.10 74 172 6.5E-154 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 4.9E-136 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 SUPERFAMILY SSF50800 74 168 6.45E-25 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 Gene3D G3DSA:3.20.20.60 6 341 6.5E-154 T 14-10-2018 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 SUPERFAMILY SSF51621 3 346 2.12E-87 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.4E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.4E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.4E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.4E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.4E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.4E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.4E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_02214 76511ddd1e2facf68ee5874fcc6c75d3 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 1.4E-26 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 SUPERFAMILY SSF56053 2 82 1.96E-23 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.806 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 3.5E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 3.5E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.5E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 PIRSF PIRSF002162 1 177 1.6E-43 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 Pfam PF00347 Ribosomal protein L6 90 164 6.3E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 Pfam PF00347 Ribosomal protein L6 11 82 3.3E-19 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 SUPERFAMILY SSF56053 83 177 6.27E-36 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 Gene3D G3DSA:3.90.930.12 1 82 9.1E-30 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.6E-73 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CF65_01233 0b5930022d2047eb0444ede03a214c89 177 Gene3D G3DSA:3.90.930.12 83 177 1.4E-39 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01703 74e1a10eaea08089fa8906e859e499ab 231 SMART SM01007 7 198 1.0E-69 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal CF65_01703 74e1a10eaea08089fa8906e859e499ab 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 2.4E-131 T 14-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 CF65_01703 74e1a10eaea08089fa8906e859e499ab 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 193 3.0E-48 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal CF65_01703 74e1a10eaea08089fa8906e859e499ab 231 Gene3D G3DSA:3.40.225.10 1 231 4.1E-66 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CF65_01703 74e1a10eaea08089fa8906e859e499ab 231 SUPERFAMILY SSF53639 1 223 7.85E-72 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CF65_00205 8401e40e855cde432a6b5aaf0cdd4c79 139 Pfam PF05025 RbsD / FucU transport protein family 1 137 1.1E-45 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CF65_00205 8401e40e855cde432a6b5aaf0cdd4c79 139 SUPERFAMILY SSF102546 1 139 1.96E-41 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CF65_00205 8401e40e855cde432a6b5aaf0cdd4c79 139 Gene3D G3DSA:3.40.1650.10 8 136 2.3E-37 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CF65_00205 8401e40e855cde432a6b5aaf0cdd4c79 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 31.73 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 CF65_01028 03e189c04758b4f2f548110a23da4ebf 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.9E-54 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CF65_01028 03e189c04758b4f2f548110a23da4ebf 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 28.697 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CF65_01028 03e189c04758b4f2f548110a23da4ebf 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 7.6E-100 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CF65_01028 03e189c04758b4f2f548110a23da4ebf 198 PIRSF PIRSF006102 1 198 3.1E-61 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CF65_00114 3bdddbab7cba06c5d505fb4c45b18515 615 SUPERFAMILY SSF54534 255 352 3.4E-29 T 14-10-2018 CF65_00114 3bdddbab7cba06c5d505fb4c45b18515 615 SUPERFAMILY SSF109998 39 230 1.18E-30 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily CF65_00114 3bdddbab7cba06c5d505fb4c45b18515 615 Gene3D G3DSA:3.10.50.40 255 377 2.1E-30 T 14-10-2018 CF65_00114 3bdddbab7cba06c5d505fb4c45b18515 615 Pfam PF13145 PPIC-type PPIASE domain 244 366 1.4E-20 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CF65_00114 3bdddbab7cba06c5d505fb4c45b18515 615 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 291 312 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CF65_00114 3bdddbab7cba06c5d505fb4c45b18515 615 Pfam PF13624 SurA N-terminal domain 3 160 1.4E-39 T 14-10-2018 CF65_00933 692c6b50e56cefeeabb316c82f539265 280 Pfam PF00005 ABC transporter 22 172 3.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_00933 692c6b50e56cefeeabb316c82f539265 280 SUPERFAMILY SSF52540 5 229 2.61E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00933 692c6b50e56cefeeabb316c82f539265 280 SMART SM00382 31 220 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00933 692c6b50e56cefeeabb316c82f539265 280 Gene3D G3DSA:3.40.50.300 2 241 3.0E-57 T 14-10-2018 CF65_02955 6e256249b5c9bff26879e07c4efec6bb 432 Gene3D G3DSA:1.10.3120.10 116 417 3.6E-105 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 CF65_02955 6e256249b5c9bff26879e07c4efec6bb 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 237 8.0E-15 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CF65_02955 6e256249b5c9bff26879e07c4efec6bb 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 1.8E-37 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CF65_02955 6e256249b5c9bff26879e07c4efec6bb 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 1.5E-42 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CF65_02955 6e256249b5c9bff26879e07c4efec6bb 432 Hamap MF_00303 Trigger factor [tig]. 1 418 21.557 T 14-10-2018 IPR005215 Trigger factor GO:0015031 CF65_02955 6e256249b5c9bff26879e07c4efec6bb 432 SUPERFAMILY SSF109998 248 429 2.45E-47 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily CF65_02955 6e256249b5c9bff26879e07c4efec6bb 432 TIGRFAM TIGR00115 tig: trigger factor 11 412 5.3E-140 T 14-10-2018 IPR005215 Trigger factor GO:0015031 CF65_02955 6e256249b5c9bff26879e07c4efec6bb 432 Gene3D G3DSA:3.10.50.40 150 246 3.6E-105 T 14-10-2018 CF65_02955 6e256249b5c9bff26879e07c4efec6bb 432 SUPERFAMILY SSF102735 1 131 1.01E-40 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 CF65_02955 6e256249b5c9bff26879e07c4efec6bb 432 SUPERFAMILY SSF54534 89 240 2.36E-38 T 14-10-2018 CF65_02955 6e256249b5c9bff26879e07c4efec6bb 432 PIRSF PIRSF003095 1 432 3.8E-123 T 14-10-2018 IPR005215 Trigger factor GO:0015031 CF65_02955 6e256249b5c9bff26879e07c4efec6bb 432 Gene3D G3DSA:3.30.70.1050 1 115 5.0E-39 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 CF65_01268 cd4c83dc3db6171b3fce5aa2fa29d584 205 Pfam PF13333 Integrase core domain 149 204 2.0E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CF65_01268 cd4c83dc3db6171b3fce5aa2fa29d584 205 SUPERFAMILY SSF53098 39 198 1.25E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_01444 cd4c83dc3db6171b3fce5aa2fa29d584 205 Pfam PF13333 Integrase core domain 149 204 2.0E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CF65_01444 cd4c83dc3db6171b3fce5aa2fa29d584 205 SUPERFAMILY SSF53098 39 198 1.25E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_01366 0137a1cc1ce132e5cb043e6554a84d10 175 Gene3D G3DSA:2.30.30.240 94 175 1.9E-35 T 14-10-2018 CF65_01366 0137a1cc1ce132e5cb043e6554a84d10 175 Pfam PF01782 RimM N-terminal domain 9 87 1.2E-23 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 CF65_01366 0137a1cc1ce132e5cb043e6554a84d10 175 Pfam PF05239 PRC-barrel domain 97 170 1.3E-9 T 14-10-2018 IPR027275 PRC-barrel domain CF65_01366 0137a1cc1ce132e5cb043e6554a84d10 175 SUPERFAMILY SSF50447 8 92 2.86E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CF65_01366 0137a1cc1ce132e5cb043e6554a84d10 175 SUPERFAMILY SSF50346 99 175 2.35E-21 T 14-10-2018 IPR011033 PRC-barrel-like superfamily CF65_01366 0137a1cc1ce132e5cb043e6554a84d10 175 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 6 175 23.981 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CF65_01366 0137a1cc1ce132e5cb043e6554a84d10 175 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 175 5.7E-56 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CF65_01366 0137a1cc1ce132e5cb043e6554a84d10 175 Gene3D G3DSA:2.40.30.60 1 93 9.3E-30 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 CF65_02663 2232f782844e45de954d9046a4657ccf 236 SUPERFAMILY SSF50249 127 228 7.8E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02663 2232f782844e45de954d9046a4657ccf 236 Gene3D G3DSA:3.30.1490.70 1 144 6.6E-42 T 14-10-2018 CF65_02663 2232f782844e45de954d9046a4657ccf 236 Pfam PF01068 ATP dependent DNA ligase domain 38 152 3.2E-11 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 CF65_02663 2232f782844e45de954d9046a4657ccf 236 Gene3D G3DSA:2.40.50.140 156 232 6.5E-7 T 14-10-2018 CF65_02663 2232f782844e45de954d9046a4657ccf 236 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 129 152 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 CF65_02663 2232f782844e45de954d9046a4657ccf 236 Gene3D G3DSA:3.30.470.30 7 105 6.6E-42 T 14-10-2018 CF65_02663 2232f782844e45de954d9046a4657ccf 236 SUPERFAMILY SSF56091 2 152 1.41E-33 T 14-10-2018 CF65_02663 2232f782844e45de954d9046a4657ccf 236 Pfam PF14743 DNA ligase OB-like domain 166 228 1.2E-25 T 14-10-2018 IPR029319 DNA ligase, OB-like domain CF65_01922 59d285455c25105d12f8843c29bb816c 830 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 9 44 6.8E-10 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial CF65_01922 59d285455c25105d12f8843c29bb816c 830 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 254 304 2.8E-16 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal CF65_01922 59d285455c25105d12f8843c29bb816c 830 Pfam PF11987 Translation-initiation factor 2 615 720 7.3E-37 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CF65_01922 59d285455c25105d12f8843c29bb816c 830 Gene3D G3DSA:2.40.30.10 732 829 3.0E-34 T 14-10-2018 CF65_01922 59d285455c25105d12f8843c29bb816c 830 Gene3D G3DSA:3.40.50.10050 624 731 5.9E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CF65_01922 59d285455c25105d12f8843c29bb816c 830 Gene3D G3DSA:2.40.30.10 502 620 4.7E-40 T 14-10-2018 CF65_01922 59d285455c25105d12f8843c29bb816c 830 SUPERFAMILY SSF50447 503 585 3.53E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CF65_01922 59d285455c25105d12f8843c29bb816c 830 SUPERFAMILY SSF52156 607 737 1.44E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CF65_01922 59d285455c25105d12f8843c29bb816c 830 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 828 17.46 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CF65_01922 59d285455c25105d12f8843c29bb816c 830 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 246 830 2.1E-294 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CF65_01922 59d285455c25105d12f8843c29bb816c 830 SUPERFAMILY SSF50447 732 828 1.32E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CF65_01922 59d285455c25105d12f8843c29bb816c 830 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 332 488 3.5E-32 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CF65_01922 59d285455c25105d12f8843c29bb816c 830 SUPERFAMILY SSF52540 326 496 1.0E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01922 59d285455c25105d12f8843c29bb816c 830 Pfam PF00009 Elongation factor Tu GTP binding domain 333 490 9.4E-36 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_01922 59d285455c25105d12f8843c29bb816c 830 ProSitePatterns PS01176 Initiation factor 2 signature. 781 803 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CF65_01922 59d285455c25105d12f8843c29bb816c 830 Gene3D G3DSA:3.40.50.300 326 501 1.4E-71 T 14-10-2018 CF65_02233 7bfb6faee1e8ba828a713d0cbc36fd0b 467 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 7 467 46.439 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CF65_02233 7bfb6faee1e8ba828a713d0cbc36fd0b 467 Pfam PF01336 OB-fold nucleic acid binding domain 21 100 7.8E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CF65_02233 7bfb6faee1e8ba828a713d0cbc36fd0b 467 PRINTS PR01042 Aspartyl-tRNA synthetase signature 422 436 3.8E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02233 7bfb6faee1e8ba828a713d0cbc36fd0b 467 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 221 3.8E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02233 7bfb6faee1e8ba828a713d0cbc36fd0b 467 PRINTS PR01042 Aspartyl-tRNA synthetase signature 382 398 3.8E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02233 7bfb6faee1e8ba828a713d0cbc36fd0b 467 PRINTS PR01042 Aspartyl-tRNA synthetase signature 225 238 3.8E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02233 7bfb6faee1e8ba828a713d0cbc36fd0b 467 Gene3D G3DSA:2.40.50.140 1 105 2.5E-19 T 14-10-2018 CF65_02233 7bfb6faee1e8ba828a713d0cbc36fd0b 467 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 460 5.5E-81 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_02233 7bfb6faee1e8ba828a713d0cbc36fd0b 467 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 467 1.5E-209 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CF65_02233 7bfb6faee1e8ba828a713d0cbc36fd0b 467 SUPERFAMILY SSF55681 100 465 1.89E-96 T 14-10-2018 CF65_02233 7bfb6faee1e8ba828a713d0cbc36fd0b 467 SUPERFAMILY SSF50249 17 102 8.78E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02233 7bfb6faee1e8ba828a713d0cbc36fd0b 467 Gene3D G3DSA:3.30.930.10 110 466 2.9E-109 T 14-10-2018 CF65_01675 e40a0f69b1710035140621b678059a04 465 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 418 1.5E-119 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CF65_01675 e40a0f69b1710035140621b678059a04 465 Pfam PF01554 MatE 249 410 6.8E-41 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CF65_01675 e40a0f69b1710035140621b678059a04 465 Pfam PF01554 MatE 22 181 8.5E-36 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CF65_01675 e40a0f69b1710035140621b678059a04 465 PIRSF PIRSF006603 3 460 3.1E-68 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CF65_00061 469478156eef234ec188d2bbd73cc21d 211 Pfam PF00005 ABC transporter 21 162 5.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_00061 469478156eef234ec188d2bbd73cc21d 211 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 5 204 2.1E-78 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 CF65_00061 469478156eef234ec188d2bbd73cc21d 211 SUPERFAMILY SSF52540 5 192 2.11E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00061 469478156eef234ec188d2bbd73cc21d 211 SMART SM00382 29 208 3.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00061 469478156eef234ec188d2bbd73cc21d 211 Gene3D G3DSA:3.40.50.300 2 211 7.2E-40 T 14-10-2018 CF65_00061 469478156eef234ec188d2bbd73cc21d 211 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02160 965d9d5015be7aa4cecdc3dc1364f722 352 Pfam PF01171 PP-loop family 83 245 6.7E-13 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CF65_02160 965d9d5015be7aa4cecdc3dc1364f722 352 SUPERFAMILY SSF52402 59 278 5.51E-52 T 14-10-2018 CF65_02160 965d9d5015be7aa4cecdc3dc1364f722 352 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 52 313 56.47 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 CF65_02160 965d9d5015be7aa4cecdc3dc1364f722 352 Gene3D G3DSA:3.40.50.620 41 302 2.7E-45 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02160 965d9d5015be7aa4cecdc3dc1364f722 352 PIRSF PIRSF004976 35 318 4.6E-73 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 CF65_00527 95d2d427f72211b44151f511befac85a 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 614 8.5E-75 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CF65_00527 95d2d427f72211b44151f511befac85a 671 Gene3D G3DSA:3.40.50.300 4 266 9.2E-98 T 14-10-2018 CF65_00527 95d2d427f72211b44151f511befac85a 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.6E-73 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CF65_00527 95d2d427f72211b44151f511befac85a 671 SUPERFAMILY SSF52540 1 640 6.82E-163 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00527 95d2d427f72211b44151f511befac85a 671 Gene3D G3DSA:1.10.486.10 377 545 1.2E-124 T 14-10-2018 CF65_00527 95d2d427f72211b44151f511befac85a 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 668 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CF65_00527 95d2d427f72211b44151f511befac85a 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 669 40.096 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CF65_00527 95d2d427f72211b44151f511befac85a 671 Gene3D G3DSA:1.10.10.160 108 181 9.2E-98 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily CF65_00527 95d2d427f72211b44151f511befac85a 671 Gene3D G3DSA:3.40.50.300 274 633 1.2E-124 T 14-10-2018 CF65_02781 ca9ba3bedc027bfbcc6ab483693a94ff 321 SUPERFAMILY SSF82866 86 301 2.62E-38 T 14-10-2018 CF65_02781 ca9ba3bedc027bfbcc6ab483693a94ff 321 Pfam PF02355 Protein export membrane protein 116 301 1.1E-69 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CF65_02781 ca9ba3bedc027bfbcc6ab483693a94ff 321 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 23 304 28.692 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CF65_02781 ca9ba3bedc027bfbcc6ab483693a94ff 321 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 51 293 3.8E-85 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CF65_02781 ca9ba3bedc027bfbcc6ab483693a94ff 321 PRINTS PR01755 Bacterial translocase SecF protein signature 209 227 8.6E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CF65_02781 ca9ba3bedc027bfbcc6ab483693a94ff 321 PRINTS PR01755 Bacterial translocase SecF protein signature 50 65 8.6E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CF65_02781 ca9ba3bedc027bfbcc6ab483693a94ff 321 PRINTS PR01755 Bacterial translocase SecF protein signature 161 175 8.6E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CF65_02781 ca9ba3bedc027bfbcc6ab483693a94ff 321 PRINTS PR01755 Bacterial translocase SecF protein signature 241 256 8.6E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CF65_02781 ca9ba3bedc027bfbcc6ab483693a94ff 321 Pfam PF07549 SecD/SecF GG Motif 45 72 2.2E-10 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CF65_02781 ca9ba3bedc027bfbcc6ab483693a94ff 321 Gene3D G3DSA:1.20.1640.10 111 307 9.3E-10 T 14-10-2018 CF65_02781 ca9ba3bedc027bfbcc6ab483693a94ff 321 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 107 290 2.9E-56 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 616 46.844 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 Gene3D G3DSA:3.30.1360.200 278 432 8.7E-46 T 14-10-2018 CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 Pfam PF07549 SecD/SecF GG Motif 115 140 5.7E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 Gene3D G3DSA:1.20.1640.10 455 603 1.8E-7 T 14-10-2018 CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 PRINTS PR00702 Acriflavin resistance protein family signature 579 602 3.5E-8 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 PRINTS PR00702 Acriflavin resistance protein family signature 450 473 3.5E-8 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 PRINTS PR00702 Acriflavin resistance protein family signature 504 528 3.5E-8 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 Gene3D G3DSA:3.30.70.3400 221 438 8.7E-46 T 14-10-2018 CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 SUPERFAMILY SSF82866 411 607 1.57E-43 T 14-10-2018 CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 602 5.1E-148 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 346 595 8.2E-83 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 Pfam PF02355 Protein export membrane protein 434 602 3.0E-20 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CF65_02780 dd65c2447cb1353f62bda240a66a4c59 616 Pfam PF13721 SecD export protein N-terminal TM region 2 103 5.0E-38 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain CF65_02903 1fc52db9db9d7c77592ef2e3ef80bc24 46 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 0.004 T 14-10-2018 CF65_02903 1fc52db9db9d7c77592ef2e3ef80bc24 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 1.5E-10 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02903 1fc52db9db9d7c77592ef2e3ef80bc24 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.918 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02903 1fc52db9db9d7c77592ef2e3ef80bc24 46 SUPERFAMILY SSF57840 1 41 1.44E-13 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02903 1fc52db9db9d7c77592ef2e3ef80bc24 46 Pfam PF00444 Ribosomal protein L36 1 41 7.4E-18 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02903 1fc52db9db9d7c77592ef2e3ef80bc24 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00798 b987186a92359135dc5254b0fa4999f2 327 Gene3D G3DSA:1.10.3470.10 10 327 1.0E-94 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_00798 b987186a92359135dc5254b0fa4999f2 327 Pfam PF01032 FecCD transport family 21 325 4.5E-97 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CF65_00798 b987186a92359135dc5254b0fa4999f2 327 SUPERFAMILY SSF81345 11 325 3.92E-82 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_02457 302b87246b10c833c96eaa0b1ff2b9d6 125 SUPERFAMILY SSF52833 17 120 8.97E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_02457 302b87246b10c833c96eaa0b1ff2b9d6 125 PIRSF PIRSF005894 13 123 3.6E-52 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 CF65_02457 302b87246b10c833c96eaa0b1ff2b9d6 125 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 20 116 1.8E-45 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related CF65_02457 302b87246b10c833c96eaa0b1ff2b9d6 125 Gene3D G3DSA:3.40.30.10 17 122 6.8E-32 T 14-10-2018 CF65_02457 302b87246b10c833c96eaa0b1ff2b9d6 125 Pfam PF00462 Glutaredoxin 32 96 9.3E-19 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CF65_00894 562d88c47f1384d8018810740d4e1869 464 Pfam PF03841 L-seryl-tRNA selenium transferase 82 451 8.8E-174 T 14-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CF65_00894 562d88c47f1384d8018810740d4e1869 464 Pfam PF12390 Selenocysteine synthase N terminal 6 44 2.0E-8 T 14-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CF65_00894 562d88c47f1384d8018810740d4e1869 464 SUPERFAMILY SSF53383 78 384 4.14E-48 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00894 562d88c47f1384d8018810740d4e1869 464 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 6 458 3.9E-183 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CF65_00894 562d88c47f1384d8018810740d4e1869 464 Gene3D G3DSA:3.90.1150.110 8 451 9.7E-158 T 14-10-2018 CF65_00894 562d88c47f1384d8018810740d4e1869 464 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 464 224.239 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CF65_00894 562d88c47f1384d8018810740d4e1869 464 Gene3D G3DSA:3.40.640.10 94 358 9.7E-158 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_01705 269edd1c453e9039c043ee7e630dde44 86 SUPERFAMILY SSF49785 9 58 1.56E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily CF65_01705 269edd1c453e9039c043ee7e630dde44 86 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 13 70 2.4E-8 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CF65_01705 269edd1c453e9039c043ee7e630dde44 86 Gene3D G3DSA:2.60.120.260 7 69 8.3E-13 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily CF65_00482 9d1bc9666e763fc0904086ba50ec474a 391 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 136 358 1.9E-29 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CF65_00482 9d1bc9666e763fc0904086ba50ec474a 391 Gene3D G3DSA:3.30.1240.10 213 314 3.1E-70 T 14-10-2018 CF65_00482 9d1bc9666e763fc0904086ba50ec474a 391 SUPERFAMILY SSF56784 131 389 1.54E-65 T 14-10-2018 IPR036412 HAD-like superfamily CF65_00482 9d1bc9666e763fc0904086ba50ec474a 391 Pfam PF08282 haloacid dehalogenase-like hydrolase 136 385 3.0E-61 T 14-10-2018 CF65_00482 9d1bc9666e763fc0904086ba50ec474a 391 ProSitePatterns PS01228 Hypothetical cof family signature 1. 135 146 - T 14-10-2018 CF65_00482 9d1bc9666e763fc0904086ba50ec474a 391 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 136 385 3.7E-58 T 14-10-2018 IPR000150 Cof family GO:0016787 CF65_00482 9d1bc9666e763fc0904086ba50ec474a 391 ProSitePatterns PS01229 Hypothetical cof family signature 2. 339 361 - T 14-10-2018 CF65_00482 9d1bc9666e763fc0904086ba50ec474a 391 Gene3D G3DSA:3.40.50.1000 134 385 3.1E-70 T 14-10-2018 IPR023214 HAD superfamily CF65_00962 45946de3b404132b5cf5ad9cc12a371f 515 Pfam PF02541 Ppx/GppA phosphatase family 36 318 1.3E-96 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CF65_00962 45946de3b404132b5cf5ad9cc12a371f 515 SUPERFAMILY SSF53067 22 142 5.1E-34 T 14-10-2018 CF65_00962 45946de3b404132b5cf5ad9cc12a371f 515 SUPERFAMILY SSF109604 323 508 2.83E-41 T 14-10-2018 CF65_00962 45946de3b404132b5cf5ad9cc12a371f 515 Gene3D G3DSA:3.30.420.150 127 305 1.2E-92 T 14-10-2018 CF65_00962 45946de3b404132b5cf5ad9cc12a371f 515 SUPERFAMILY SSF53067 148 319 2.89E-47 T 14-10-2018 CF65_00962 45946de3b404132b5cf5ad9cc12a371f 515 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 22 315 1.4E-94 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CF65_00962 45946de3b404132b5cf5ad9cc12a371f 515 PIRSF PIRSF001267 14 515 8.4E-195 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CF65_00962 45946de3b404132b5cf5ad9cc12a371f 515 Gene3D G3DSA:3.30.420.40 24 313 1.2E-92 T 14-10-2018 CF65_00962 45946de3b404132b5cf5ad9cc12a371f 515 Gene3D G3DSA:1.10.3210.10 320 514 1.4E-52 T 14-10-2018 CF65_02089 de302fb910f28b02c29c86edfea72b0e 361 SUPERFAMILY SSF51445 2 267 4.94E-58 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily CF65_02089 de302fb910f28b02c29c86edfea72b0e 361 SUPERFAMILY SSF51011 275 358 1.85E-11 T 14-10-2018 CF65_02089 de302fb910f28b02c29c86edfea72b0e 361 Gene3D G3DSA:2.60.40.1180 275 360 3.1E-11 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta CF65_02089 de302fb910f28b02c29c86edfea72b0e 361 Gene3D G3DSA:3.20.20.80 1 274 7.4E-96 T 14-10-2018 CF65_00463 bff892ee2ebeb6af5e392ca49187bf82 235 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 235 1.4E-120 T 14-10-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CF65_00463 bff892ee2ebeb6af5e392ca49187bf82 235 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 52 218 1.9E-28 T 14-10-2018 IPR005519 Acid phosphatase, class B-like CF65_00463 bff892ee2ebeb6af5e392ca49187bf82 235 PIRSF PIRSF017818 1 235 2.0E-112 T 14-10-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CF65_00463 bff892ee2ebeb6af5e392ca49187bf82 235 Gene3D G3DSA:3.40.50.1000 23 235 2.7E-85 T 14-10-2018 IPR023214 HAD superfamily CF65_00463 bff892ee2ebeb6af5e392ca49187bf82 235 SUPERFAMILY SSF56784 28 235 4.75E-64 T 14-10-2018 IPR036412 HAD-like superfamily CF65_02141 40df6c485180f038f450a5a58cdb0f5f 375 Pfam PF12698 ABC-2 family transporter protein 25 364 1.0E-27 T 14-10-2018 CF65_02891 6404f922220756c3482ce818ca973597 272 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 270 2.5E-46 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain CF65_02891 6404f922220756c3482ce818ca973597 272 Gene3D G3DSA:3.40.190.10 36 271 3.6E-93 T 14-10-2018 CF65_02891 6404f922220756c3482ce818ca973597 272 SUPERFAMILY SSF53850 30 269 1.99E-74 T 14-10-2018 CF65_02891 6404f922220756c3482ce818ca973597 272 Gene3D G3DSA:3.90.76.10 65 189 3.6E-93 T 14-10-2018 CF65_02891 6404f922220756c3482ce818ca973597 272 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site CF65_01437 6bb047f48cde96d10698df74719f4db7 387 Gene3D G3DSA:3.40.50.1260 165 373 1.7E-154 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 4.7E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 4.7E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 4.7E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 4.7E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 4.7E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 4.7E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 4.7E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 4.7E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 4.7E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.231 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 Pfam PF00162 Phosphoglycerate kinase 6 373 2.8E-139 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 Gene3D G3DSA:3.40.50.1260 10 379 1.7E-154 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 PIRSF PIRSF000724 1 387 1.6E-134 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 SUPERFAMILY SSF53748 3 383 3.3E-146 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_01437 6bb047f48cde96d10698df74719f4db7 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CF65_02369 18df9c5b4962138d40d52064d7329c3d 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 106 23.105 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 CF65_02369 18df9c5b4962138d40d52064d7329c3d 107 Gene3D G3DSA:3.30.110.70 2 107 7.9E-39 T 14-10-2018 CF65_02369 18df9c5b4962138d40d52064d7329c3d 107 Pfam PF01906 Putative heavy-metal-binding 1 106 2.5E-37 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 CF65_02369 18df9c5b4962138d40d52064d7329c3d 107 SUPERFAMILY SSF117782 1 106 1.57E-35 T 14-10-2018 IPR035439 UPF0145 domain superfamily CF65_01663 a929ab5f2d366bde0faa467ca80cc4b8 218 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 217 1.7E-83 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CF65_01663 a929ab5f2d366bde0faa467ca80cc4b8 218 Gene3D G3DSA:3.30.1130.10 85 218 1.6E-51 T 14-10-2018 CF65_01663 a929ab5f2d366bde0faa467ca80cc4b8 218 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CF65_01663 a929ab5f2d366bde0faa467ca80cc4b8 218 Gene3D G3DSA:1.10.286.10 1 84 2.3E-32 T 14-10-2018 CF65_01663 a929ab5f2d366bde0faa467ca80cc4b8 218 SUPERFAMILY SSF55620 14 217 8.89E-73 T 14-10-2018 CF65_01663 a929ab5f2d366bde0faa467ca80cc4b8 218 Pfam PF01227 GTP cyclohydrolase I 38 216 9.0E-63 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CF65_01663 a929ab5f2d366bde0faa467ca80cc4b8 218 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.841 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CF65_01663 a929ab5f2d366bde0faa467ca80cc4b8 218 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CF65_01193 a575e3f72213eca61c716e3d749dac62 555 Pfam PF00501 AMP-binding enzyme 14 280 1.0E-18 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CF65_01193 a575e3f72213eca61c716e3d749dac62 555 Gene3D G3DSA:3.10.129.10 439 555 1.5E-22 T 14-10-2018 CF65_01193 a575e3f72213eca61c716e3d749dac62 555 Gene3D G3DSA:3.40.50.12780 4 307 3.8E-29 T 14-10-2018 CF65_01193 a575e3f72213eca61c716e3d749dac62 555 Gene3D G3DSA:3.30.300.30 332 435 1.7E-9 T 14-10-2018 CF65_01193 a575e3f72213eca61c716e3d749dac62 555 SUPERFAMILY SSF54637 455 551 1.86E-11 T 14-10-2018 IPR029069 HotDog domain superfamily CF65_01193 a575e3f72213eca61c716e3d749dac62 555 SUPERFAMILY SSF56801 15 434 1.57E-47 T 14-10-2018 CF65_01897 7e5e22f95dda737de295f1cd87890ff9 59 SUPERFAMILY SSF46955 7 58 1.45E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily CF65_01897 7e5e22f95dda737de295f1cd87890ff9 59 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 8 55 1.1E-14 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA CF65_00819 d507ed4a9622c8d5836cc8802e68cae6 226 Gene3D G3DSA:3.30.1380.10 11 204 1.6E-28 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CF65_00819 d507ed4a9622c8d5836cc8802e68cae6 226 SUPERFAMILY SSF55166 16 185 4.32E-17 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CF65_00819 d507ed4a9622c8d5836cc8802e68cae6 226 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 27 184 1.7E-36 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 CF65_02276 fd671513634d7216a643b533f6d5d8f6 237 Gene3D G3DSA:3.30.2350.10 3 236 4.0E-62 T 14-10-2018 CF65_02276 fd671513634d7216a643b533f6d5d8f6 237 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 51 65 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02276 fd671513634d7216a643b533f6d5d8f6 237 Pfam PF00849 RNA pseudouridylate synthase 12 171 3.4E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02276 fd671513634d7216a643b533f6d5d8f6 237 SUPERFAMILY SSF55120 2 236 2.56E-65 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01495 eba0fab196a02d9bb14176ffe11a4602 252 SUPERFAMILY SSF51735 1 236 2.24E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01495 eba0fab196a02d9bb14176ffe11a4602 252 Gene3D G3DSA:3.90.25.10 103 234 6.5E-66 T 14-10-2018 CF65_01495 eba0fab196a02d9bb14176ffe11a4602 252 Gene3D G3DSA:3.40.50.720 1 233 6.5E-66 T 14-10-2018 CF65_01495 eba0fab196a02d9bb14176ffe11a4602 252 Pfam PF13460 NAD(P)H-binding 1 146 2.6E-15 T 14-10-2018 IPR016040 NAD(P)-binding domain CF65_02839 7c0f6fe7f59fa9fe47e636a17bc1f17a 32 Pfam PF08173 Membrane bound YbgT-like protein 1 26 9.1E-9 T 14-10-2018 IPR012994 Membrane bound YbgT-like CF65_01915 6f3709df3974d74bbb4d22e4dc586a2d 90 Pfam PF04221 RelB antitoxin 4 74 1.7E-20 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CF65_01915 6f3709df3974d74bbb4d22e4dc586a2d 90 PIRSF PIRSF003108 1 88 1.3E-18 T 14-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 CF65_01915 6f3709df3974d74bbb4d22e4dc586a2d 90 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 3 80 3.2E-17 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CF65_01915 6f3709df3974d74bbb4d22e4dc586a2d 90 Gene3D G3DSA:1.10.1220.10 3 50 5.9E-13 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CF65_01230 3ff9f3bae2da4a6d790e9f58b207bc3d 179 SUPERFAMILY SSF55282 4 179 5.42E-80 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01230 3ff9f3bae2da4a6d790e9f58b207bc3d 179 Pfam PF00281 Ribosomal protein L5 24 80 7.5E-29 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01230 3ff9f3bae2da4a6d790e9f58b207bc3d 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.126 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01230 3ff9f3bae2da4a6d790e9f58b207bc3d 179 PIRSF PIRSF002161 1 179 1.1E-68 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01230 3ff9f3bae2da4a6d790e9f58b207bc3d 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01230 3ff9f3bae2da4a6d790e9f58b207bc3d 179 Gene3D G3DSA:3.30.1440.10 1 179 3.2E-82 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01230 3ff9f3bae2da4a6d790e9f58b207bc3d 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 9.4E-42 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_02540 13daf49a334a5fc8a3ce2f974e953f3b 757 PIRSF PIRSF000382 1 757 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CF65_02540 13daf49a334a5fc8a3ce2f974e953f3b 757 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 308 1.2E-121 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CF65_02540 13daf49a334a5fc8a3ce2f974e953f3b 757 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 428 750 6.4E-159 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CF65_02540 13daf49a334a5fc8a3ce2f974e953f3b 757 Gene3D G3DSA:3.20.20.210 7 521 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CF65_02540 13daf49a334a5fc8a3ce2f974e953f3b 757 SUPERFAMILY SSF51726 5 390 3.53E-102 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CF65_02540 13daf49a334a5fc8a3ce2f974e953f3b 757 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 754 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CF65_02540 13daf49a334a5fc8a3ce2f974e953f3b 757 SUPERFAMILY SSF51726 393 754 4.97E-118 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CF65_02540 13daf49a334a5fc8a3ce2f974e953f3b 757 Gene3D G3DSA:3.20.20.210 386 753 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CF65_02540 13daf49a334a5fc8a3ce2f974e953f3b 757 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 755 36.692 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CF65_02237 305c48a0ce8f2b9e5d8d7f4474b826b2 151 Pfam PF02391 MoaE protein 8 120 2.9E-34 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 CF65_02237 305c48a0ce8f2b9e5d8d7f4474b826b2 151 SUPERFAMILY SSF54690 5 150 1.31E-50 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 CF65_02237 305c48a0ce8f2b9e5d8d7f4474b826b2 151 Gene3D G3DSA:3.90.1170.40 1 150 2.6E-50 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 CF65_00057 b1c29cf4f3065a775c6b09dd88e8cb58 74 Pfam PF04995 Heme exporter protein D (CcmD) 19 61 1.2E-17 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CF65_00057 b1c29cf4f3065a775c6b09dd88e8cb58 74 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 16 61 6.5E-21 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CF65_00716 dab973730b57adde8a15ade3736bc848 64 PIRSF PIRSF039003 1 64 1.7E-31 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CF65_00716 dab973730b57adde8a15ade3736bc848 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 2.7E-31 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CF65_00716 dab973730b57adde8a15ade3736bc848 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 4.6E-33 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CF65_00716 dab973730b57adde8a15ade3736bc848 64 SUPERFAMILY SSF140319 1 63 1.12E-26 T 14-10-2018 IPR036762 IscX-like superfamily CF65_00716 dab973730b57adde8a15ade3736bc848 64 Gene3D G3DSA:1.10.10.600 1 64 1.2E-30 T 14-10-2018 IPR036762 IscX-like superfamily CF65_02509 36901cc4e4e59fb1a4aa932cfb9eb6fb 357 Hamap MF_00300 Chorismate synthase [aroC]. 10 357 37.558 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CF65_02509 36901cc4e4e59fb1a4aa932cfb9eb6fb 357 Gene3D G3DSA:3.60.150.10 1 357 2.7E-158 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CF65_02509 36901cc4e4e59fb1a4aa932cfb9eb6fb 357 ProSitePatterns PS00789 Chorismate synthase signature 3. 324 340 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CF65_02509 36901cc4e4e59fb1a4aa932cfb9eb6fb 357 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CF65_02509 36901cc4e4e59fb1a4aa932cfb9eb6fb 357 PIRSF PIRSF001456 3 357 4.0E-144 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CF65_02509 36901cc4e4e59fb1a4aa932cfb9eb6fb 357 SUPERFAMILY SSF103263 4 356 5.36E-148 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CF65_02509 36901cc4e4e59fb1a4aa932cfb9eb6fb 357 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CF65_02509 36901cc4e4e59fb1a4aa932cfb9eb6fb 357 Pfam PF01264 Chorismate synthase 10 350 2.5E-143 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CF65_02509 36901cc4e4e59fb1a4aa932cfb9eb6fb 357 TIGRFAM TIGR00033 aroC: chorismate synthase 10 353 8.2E-142 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CF65_01876 b87f4ebeda218f42988b3a2b118fdb77 229 SUPERFAMILY SSF55604 152 225 7.72E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CF65_01876 b87f4ebeda218f42988b3a2b118fdb77 229 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 165 182 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CF65_01876 b87f4ebeda218f42988b3a2b118fdb77 229 Pfam PF00367 phosphotransferase system, EIIB 155 187 1.1E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CF65_01876 b87f4ebeda218f42988b3a2b118fdb77 229 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 125 211 4.6E-20 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CF65_01876 b87f4ebeda218f42988b3a2b118fdb77 229 Pfam PF02378 Phosphotransferase system, EIIC 1 64 1.0E-17 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CF65_01876 b87f4ebeda218f42988b3a2b118fdb77 229 Gene3D G3DSA:3.30.1360.60 147 228 4.6E-27 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CF65_01188 8ebcf6f3fd852a7f93d79131564082ac 148 SUPERFAMILY SSF54637 11 141 9.4E-27 T 14-10-2018 IPR029069 HotDog domain superfamily CF65_01188 8ebcf6f3fd852a7f93d79131564082ac 148 Gene3D G3DSA:3.10.129.10 6 147 6.0E-25 T 14-10-2018 CF65_01188 8ebcf6f3fd852a7f93d79131564082ac 148 Pfam PF13279 Thioesterase-like superfamily 19 115 4.4E-6 T 14-10-2018 CF65_02762 bf3cce58e39c6dcf5e508f3e23eec637 155 Gene3D G3DSA:3.30.420.10 1 150 4.3E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CF65_02762 bf3cce58e39c6dcf5e508f3e23eec637 155 Pfam PF00075 RNase H 3 142 2.2E-51 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CF65_02762 bf3cce58e39c6dcf5e508f3e23eec637 155 SUPERFAMILY SSF53098 3 143 2.78E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_02762 bf3cce58e39c6dcf5e508f3e23eec637 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 33.451 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 CF65_00668 bd2a51d50d4afdc9b22871a894cc9899 283 Gene3D G3DSA:3.60.10.10 23 282 2.2E-88 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CF65_00668 bd2a51d50d4afdc9b22871a894cc9899 283 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 30 274 1.4E-12 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase CF65_00668 bd2a51d50d4afdc9b22871a894cc9899 283 SUPERFAMILY SSF56219 23 281 1.03E-32 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CF65_00668 bd2a51d50d4afdc9b22871a894cc9899 283 PIRSF PIRSF018539 7 283 9.9E-137 T 14-10-2018 IPR003539 Cytolethal distending toxin B GO:0009405 CF65_00668 bd2a51d50d4afdc9b22871a894cc9899 283 PRINTS PR01388 Cytolethal distending toxin B signature 193 208 2.0E-66 T 14-10-2018 IPR003539 Cytolethal distending toxin B GO:0009405 CF65_00668 bd2a51d50d4afdc9b22871a894cc9899 283 PRINTS PR01388 Cytolethal distending toxin B signature 99 117 2.0E-66 T 14-10-2018 IPR003539 Cytolethal distending toxin B GO:0009405 CF65_00668 bd2a51d50d4afdc9b22871a894cc9899 283 PRINTS PR01388 Cytolethal distending toxin B signature 144 163 2.0E-66 T 14-10-2018 IPR003539 Cytolethal distending toxin B GO:0009405 CF65_00668 bd2a51d50d4afdc9b22871a894cc9899 283 PRINTS PR01388 Cytolethal distending toxin B signature 65 85 2.0E-66 T 14-10-2018 IPR003539 Cytolethal distending toxin B GO:0009405 CF65_00668 bd2a51d50d4afdc9b22871a894cc9899 283 PRINTS PR01388 Cytolethal distending toxin B signature 261 277 2.0E-66 T 14-10-2018 IPR003539 Cytolethal distending toxin B GO:0009405 CF65_00668 bd2a51d50d4afdc9b22871a894cc9899 283 PRINTS PR01388 Cytolethal distending toxin B signature 24 45 2.0E-66 T 14-10-2018 IPR003539 Cytolethal distending toxin B GO:0009405 CF65_02112 4193cf5aedb7d3e50a4787c04fcde069 1496 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1361 1449 2.0E-14 T 14-10-2018 CF65_02112 4193cf5aedb7d3e50a4787c04fcde069 1496 Gene3D G3DSA:3.40.1140.10 1408 1493 4.9E-38 T 14-10-2018 CF65_02112 4193cf5aedb7d3e50a4787c04fcde069 1496 Pfam PF04310 MukB N-terminal 29 253 5.8E-120 T 14-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CF65_02112 4193cf5aedb7d3e50a4787c04fcde069 1496 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 28 1496 11.196 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CF65_02112 4193cf5aedb7d3e50a4787c04fcde069 1496 Gene3D G3DSA:1.20.58.850 647 857 6.5E-130 T 14-10-2018 CF65_02112 4193cf5aedb7d3e50a4787c04fcde069 1496 Gene3D G3DSA:1.20.58.850 609 879 6.5E-130 T 14-10-2018 CF65_02112 4193cf5aedb7d3e50a4787c04fcde069 1496 SUPERFAMILY SSF52540 48 1458 4.43E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02112 4193cf5aedb7d3e50a4787c04fcde069 1496 SUPERFAMILY SSF52540 49 250 2.04E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02112 4193cf5aedb7d3e50a4787c04fcde069 1496 Pfam PF16330 MukB hinge domain 672 837 1.3E-73 T 14-10-2018 IPR032520 MukB, hinge domain CF65_02112 4193cf5aedb7d3e50a4787c04fcde069 1496 PIRSF PIRSF005246 28 1496 0.0 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CF65_02112 4193cf5aedb7d3e50a4787c04fcde069 1496 Gene3D G3DSA:1.20.1060.30 694 805 6.5E-130 T 14-10-2018 CF65_02112 4193cf5aedb7d3e50a4787c04fcde069 1496 Gene3D G3DSA:3.40.1140.10 28 253 2.5E-96 T 14-10-2018 CF65_00810 567875b2dbae8846efd249e603cc5e5a 342 Pfam PF00107 Zinc-binding dehydrogenase 176 295 1.6E-17 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CF65_00810 567875b2dbae8846efd249e603cc5e5a 342 SUPERFAMILY SSF50129 2 171 2.74E-39 T 14-10-2018 IPR011032 GroES-like superfamily CF65_00810 567875b2dbae8846efd249e603cc5e5a 342 SMART SM00829 15 333 3.3E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CF65_00810 567875b2dbae8846efd249e603cc5e5a 342 Gene3D G3DSA:3.90.180.10 29 333 6.4E-87 T 14-10-2018 CF65_00810 567875b2dbae8846efd249e603cc5e5a 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CF65_00810 567875b2dbae8846efd249e603cc5e5a 342 Gene3D G3DSA:3.40.50.720 150 305 6.4E-87 T 14-10-2018 CF65_00810 567875b2dbae8846efd249e603cc5e5a 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 134 5.0E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CF65_00810 567875b2dbae8846efd249e603cc5e5a 342 SUPERFAMILY SSF51735 139 297 4.29E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02602 5225a8a9a3b8849432948669775962fc 272 PIRSF PIRSF016020 3 269 3.7E-39 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 CF65_02602 5225a8a9a3b8849432948669775962fc 272 Pfam PF01263 Aldose 1-epimerase 25 270 2.5E-39 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CF65_02602 5225a8a9a3b8849432948669775962fc 272 Gene3D G3DSA:2.70.98.10 3 272 1.1E-73 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CF65_02602 5225a8a9a3b8849432948669775962fc 272 SUPERFAMILY SSF74650 6 271 3.01E-73 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CF65_01553 fbb2921cc65403d0e7929a9827ecaa3a 911 Pfam PF11739 Dicarboxylate transport 708 901 1.3E-50 T 14-10-2018 IPR021730 Dicarboxylate transport CF65_00549 70d3d2ad75476ba8ef47c325952cd2a5 293 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 226 237 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_00549 70d3d2ad75476ba8ef47c325952cd2a5 293 Gene3D G3DSA:3.30.70.20 204 290 1.8E-7 T 14-10-2018 CF65_00549 70d3d2ad75476ba8ef47c325952cd2a5 293 SUPERFAMILY SSF54862 104 283 5.53E-22 T 14-10-2018 CF65_00549 70d3d2ad75476ba8ef47c325952cd2a5 293 Pfam PF12801 4Fe-4S binding domain 180 212 0.0043 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00549 70d3d2ad75476ba8ef47c325952cd2a5 293 Pfam PF12801 4Fe-4S binding domain 83 128 6.4E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00549 70d3d2ad75476ba8ef47c325952cd2a5 293 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 24 279 1.3E-117 T 14-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family CF65_00549 70d3d2ad75476ba8ef47c325952cd2a5 293 Pfam PF12837 4Fe-4S binding domain 220 241 2.2E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02094 e634571d2a7279e90cc19612b731c1cc 821 SUPERFAMILY SSF53756 15 818 0.0 T 14-10-2018 CF65_02094 e634571d2a7279e90cc19612b731c1cc 821 Gene3D G3DSA:3.40.50.2000 34 816 0.0 T 14-10-2018 CF65_02094 e634571d2a7279e90cc19612b731c1cc 821 PIRSF PIRSF000460 11 821 5.2E-227 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CF65_02094 e634571d2a7279e90cc19612b731c1cc 821 Pfam PF00343 Carbohydrate phosphorylase 107 814 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CF65_02094 e634571d2a7279e90cc19612b731c1cc 821 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 659 671 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CF65_02094 e634571d2a7279e90cc19612b731c1cc 821 Gene3D G3DSA:3.40.50.2000 473 799 0.0 T 14-10-2018 CF65_02094 e634571d2a7279e90cc19612b731c1cc 821 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 19 814 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CF65_01822 05f38424b25b036b0a2bffc588e70d9c 510 SUPERFAMILY SSF51261 232 480 9.03E-73 T 14-10-2018 IPR011055 Duplicated hybrid motif CF65_01822 05f38424b25b036b0a2bffc588e70d9c 510 Pfam PF01551 Peptidase family M23 383 478 1.6E-33 T 14-10-2018 IPR016047 Peptidase M23 CF65_01822 05f38424b25b036b0a2bffc588e70d9c 510 Gene3D G3DSA:2.70.70.10 353 484 3.8E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif CF65_01822 05f38424b25b036b0a2bffc588e70d9c 510 Gene3D G3DSA:3.10.450.350 160 247 3.1E-5 T 14-10-2018 CF65_01822 05f38424b25b036b0a2bffc588e70d9c 510 Gene3D G3DSA:3.10.450.350 250 352 4.3E-25 T 14-10-2018 CF65_01779 5f8c6b2b4f66693e2bead1bf1dcd5f7b 353 SUPERFAMILY SSF52540 5 224 2.2E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01779 5f8c6b2b4f66693e2bead1bf1dcd5f7b 353 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01779 5f8c6b2b4f66693e2bead1bf1dcd5f7b 353 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 289 351 1.8E-17 T 14-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 CF65_01779 5f8c6b2b4f66693e2bead1bf1dcd5f7b 353 SUPERFAMILY SSF50331 243 350 4.89E-20 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01779 5f8c6b2b4f66693e2bead1bf1dcd5f7b 353 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 350 7.7E-141 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 CF65_01779 5f8c6b2b4f66693e2bead1bf1dcd5f7b 353 Pfam PF00005 ABC transporter 18 156 2.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01779 5f8c6b2b4f66693e2bead1bf1dcd5f7b 353 Gene3D G3DSA:2.40.50.100 289 351 3.5E-17 T 14-10-2018 CF65_01779 5f8c6b2b4f66693e2bead1bf1dcd5f7b 353 Pfam PF03459 TOBE domain 290 350 4.7E-18 T 14-10-2018 IPR005116 Transport-associated OB, type 1 CF65_01779 5f8c6b2b4f66693e2bead1bf1dcd5f7b 353 Gene3D G3DSA:3.40.50.300 3 226 4.5E-55 T 14-10-2018 CF65_01779 5f8c6b2b4f66693e2bead1bf1dcd5f7b 353 SMART SM00382 23 205 4.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01342 e06f1895d74a7e55e3e2ce9e5c9968a1 266 SUPERFAMILY SSF53335 39 263 1.92E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01342 e06f1895d74a7e55e3e2ce9e5c9968a1 266 Gene3D G3DSA:3.40.50.150 30 200 5.6E-22 T 14-10-2018 CF65_01342 e06f1895d74a7e55e3e2ce9e5c9968a1 266 Pfam PF13649 Methyltransferase domain 63 145 2.4E-10 T 14-10-2018 CF65_02492 9565310565c88f6ff5420bf093a4f1a1 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 75 3.3E-9 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CF65_02492 9565310565c88f6ff5420bf093a4f1a1 203 Gene3D G3DSA:3.40.30.10 2 198 2.9E-60 T 14-10-2018 CF65_02492 9565310565c88f6ff5420bf093a4f1a1 203 Gene3D G3DSA:1.20.1050.10 79 190 2.9E-60 T 14-10-2018 CF65_02492 9565310565c88f6ff5420bf093a4f1a1 203 SUPERFAMILY SSF47616 68 198 1.91E-21 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CF65_02492 9565310565c88f6ff5420bf093a4f1a1 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 190 9.5E-10 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal CF65_02492 9565310565c88f6ff5420bf093a4f1a1 203 SUPERFAMILY SSF52833 1 79 5.95E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_00863 be049f79e7f149a77f751a996bf7b2d2 640 Gene3D G3DSA:3.40.630.30 320 524 6.0E-66 T 14-10-2018 CF65_00863 be049f79e7f149a77f751a996bf7b2d2 640 Pfam PF17176 tRNA-binding domain 530 636 1.8E-23 T 14-10-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain CF65_00863 be049f79e7f149a77f751a996bf7b2d2 640 Gene3D G3DSA:1.20.120.890 525 637 1.6E-11 T 14-10-2018 IPR038321 TmcA, C-terminal domain superfamily CF65_00863 be049f79e7f149a77f751a996bf7b2d2 640 SUPERFAMILY SSF52540 120 277 3.19E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00863 be049f79e7f149a77f751a996bf7b2d2 640 Pfam PF13718 GNAT acetyltransferase 2 362 477 9.9E-18 T 14-10-2018 IPR000182 GNAT domain CF65_00863 be049f79e7f149a77f751a996bf7b2d2 640 Pfam PF05127 Helicase 177 327 6.1E-37 T 14-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 CF65_00863 be049f79e7f149a77f751a996bf7b2d2 640 Pfam PF08351 Domain of unknown function (DUF1726) 46 129 3.1E-5 T 14-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 CF65_00863 be049f79e7f149a77f751a996bf7b2d2 640 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 1 636 44.118 T 14-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 CF65_00863 be049f79e7f149a77f751a996bf7b2d2 640 SUPERFAMILY SSF55729 371 509 1.12E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase CF65_00863 be049f79e7f149a77f751a996bf7b2d2 640 Gene3D G3DSA:3.40.50.12320 173 318 8.2E-40 T 14-10-2018 CF65_00863 be049f79e7f149a77f751a996bf7b2d2 640 Gene3D G3DSA:3.40.50.11040 1 172 2.5E-38 T 14-10-2018 CF65_00465 08ea604e980df01197e4ae081b2907db 105 Pfam PF14131 Domain of unknown function (DUF4298) 10 95 1.1E-22 T 14-10-2018 IPR025384 Protein of unknown function DUF4298 CF65_02263 bab606047691a99d70d897b87519f731 198 Gene3D G3DSA:3.40.50.150 3 198 1.2E-44 T 14-10-2018 CF65_02263 bab606047691a99d70d897b87519f731 198 Pfam PF13649 Methyltransferase domain 37 128 8.8E-12 T 14-10-2018 CF65_02263 bab606047691a99d70d897b87519f731 198 SUPERFAMILY SSF53335 3 170 1.25E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01172 650cc518510e58c1d670c1c08a43c9db 84 PIRSF PIRSF037291 1 84 2.4E-31 T 14-10-2018 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related CF65_01172 650cc518510e58c1d670c1c08a43c9db 84 Gene3D G3DSA:3.40.30.10 2 84 6.1E-6 T 14-10-2018 CF65_01172 650cc518510e58c1d670c1c08a43c9db 84 SUPERFAMILY SSF52833 4 77 1.15E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_02418 54b916d66c3d767cb5ff8d92f60dfb16 214 Pfam PF01195 Peptidyl-tRNA hydrolase 26 209 1.2E-54 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CF65_02418 54b916d66c3d767cb5ff8d92f60dfb16 214 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 24 203 37.649 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CF65_02418 54b916d66c3d767cb5ff8d92f60dfb16 214 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 37 50 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CF65_02418 54b916d66c3d767cb5ff8d92f60dfb16 214 Gene3D G3DSA:3.40.50.1470 16 214 1.2E-72 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 CF65_02418 54b916d66c3d767cb5ff8d92f60dfb16 214 SUPERFAMILY SSF53178 24 212 4.32E-70 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 CF65_02418 54b916d66c3d767cb5ff8d92f60dfb16 214 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 24 211 1.4E-74 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CF65_02418 54b916d66c3d767cb5ff8d92f60dfb16 214 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 131 141 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CF65_02516 f18a4f40a41c523b331ae10ce01e20eb 146 Gene3D G3DSA:1.10.10.10 2 85 1.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02516 f18a4f40a41c523b331ae10ce01e20eb 146 Pfam PF01475 Ferric uptake regulator family 12 131 1.5E-46 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CF65_02516 f18a4f40a41c523b331ae10ce01e20eb 146 SUPERFAMILY SSF46785 4 136 1.19E-41 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_02516 f18a4f40a41c523b331ae10ce01e20eb 146 Gene3D G3DSA:3.30.1490.190 86 144 2.5E-21 T 14-10-2018 CF65_02137 37ebc0f10cd97458e56c07eda14c6ff6 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 6.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CF65_02137 37ebc0f10cd97458e56c07eda14c6ff6 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 6.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CF65_02137 37ebc0f10cd97458e56c07eda14c6ff6 187 Gene3D G3DSA:1.10.357.10 4 178 3.1E-29 T 14-10-2018 CF65_02137 37ebc0f10cd97458e56c07eda14c6ff6 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 8.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CF65_02137 37ebc0f10cd97458e56c07eda14c6ff6 187 SUPERFAMILY SSF46689 6 72 2.77E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01296 d6dd35454c383707426bc794d8a8b4c6 163 Pfam PF01202 Shikimate kinase 1 157 9.0E-55 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CF65_01296 d6dd35454c383707426bc794d8a8b4c6 163 PRINTS PR01100 Shikimate kinase family signature 86 103 6.4E-18 T 14-10-2018 CF65_01296 d6dd35454c383707426bc794d8a8b4c6 163 PRINTS PR01100 Shikimate kinase family signature 47 55 6.4E-18 T 14-10-2018 CF65_01296 d6dd35454c383707426bc794d8a8b4c6 163 PRINTS PR01100 Shikimate kinase family signature 65 74 6.4E-18 T 14-10-2018 CF65_01296 d6dd35454c383707426bc794d8a8b4c6 163 PRINTS PR01100 Shikimate kinase family signature 19 32 6.4E-18 T 14-10-2018 CF65_01296 d6dd35454c383707426bc794d8a8b4c6 163 ProSitePatterns PS01128 Shikimate kinase signature. 48 73 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CF65_01296 d6dd35454c383707426bc794d8a8b4c6 163 SUPERFAMILY SSF52540 1 158 2.47E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01296 d6dd35454c383707426bc794d8a8b4c6 163 Gene3D G3DSA:3.40.50.300 1 160 2.4E-51 T 14-10-2018 CF65_01296 d6dd35454c383707426bc794d8a8b4c6 163 Hamap MF_00109 Shikimate kinase [aroK]. 1 159 24.356 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CF65_00358 8775c5688f3eaa552e3086935faa9c0e 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 9.7E-37 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00358 8775c5688f3eaa552e3086935faa9c0e 85 Pfam PF00366 Ribosomal protein S17 10 76 1.8E-32 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00358 8775c5688f3eaa552e3086935faa9c0e 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 24.807 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00358 8775c5688f3eaa552e3086935faa9c0e 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 10 76 2.0E-33 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00358 8775c5688f3eaa552e3086935faa9c0e 85 SUPERFAMILY SSF50249 6 82 1.78E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_00358 8775c5688f3eaa552e3086935faa9c0e 85 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.1E-13 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00358 8775c5688f3eaa552e3086935faa9c0e 85 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.1E-13 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00358 8775c5688f3eaa552e3086935faa9c0e 85 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.1E-13 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00358 8775c5688f3eaa552e3086935faa9c0e 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00358 8775c5688f3eaa552e3086935faa9c0e 85 Gene3D G3DSA:2.40.50.140 1 84 3.7E-37 T 14-10-2018 CF65_00088 2593bb3bc8261d95c27ba69c95132eea 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 4.9E-39 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00088 2593bb3bc8261d95c27ba69c95132eea 89 SMART SM01387 8 88 1.8E-48 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00088 2593bb3bc8261d95c27ba69c95132eea 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 5.0E-27 T 14-10-2018 CF65_00088 2593bb3bc8261d95c27ba69c95132eea 89 SUPERFAMILY SSF47060 3 89 2.44E-34 T 14-10-2018 IPR009068 S15/NS1, RNA-binding CF65_00088 2593bb3bc8261d95c27ba69c95132eea 89 Pfam PF00312 Ribosomal protein S15 8 88 8.8E-36 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00088 2593bb3bc8261d95c27ba69c95132eea 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.98 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00088 2593bb3bc8261d95c27ba69c95132eea 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00088 2593bb3bc8261d95c27ba69c95132eea 89 Gene3D G3DSA:1.10.287.10 2 89 4.2E-36 T 14-10-2018 CF65_02001 326029316b047457e6bff4b148e5e3ea 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 106 31.25 T 14-10-2018 IPR007376 dsDNA mimic, putative CF65_02001 326029316b047457e6bff4b148e5e3ea 106 Gene3D G3DSA:3.10.450.140 7 106 1.5E-41 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily CF65_02001 326029316b047457e6bff4b148e5e3ea 106 Pfam PF04269 Protein of unknown function, DUF440 7 105 1.5E-46 T 14-10-2018 IPR007376 dsDNA mimic, putative CF65_02001 326029316b047457e6bff4b148e5e3ea 106 PIRSF PIRSF004916 1 106 3.6E-50 T 14-10-2018 IPR007376 dsDNA mimic, putative CF65_02001 326029316b047457e6bff4b148e5e3ea 106 SUPERFAMILY SSF102816 2 105 3.79E-48 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily CF65_02001 326029316b047457e6bff4b148e5e3ea 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 4 105 1.0E-46 T 14-10-2018 IPR007376 dsDNA mimic, putative CF65_02962 77e1fc5bc9305e5c1ae312908fc2cd8c 301 Pfam PF04381 Putative exonuclease, RdgC 2 297 3.5E-113 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CF65_02722 36e00eed67ed5868cd5ac37db1bc787a 298 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 42 297 1.4E-92 T 14-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CF65_02722 36e00eed67ed5868cd5ac37db1bc787a 298 Hamap MF_01558 Cytidine deaminase [cdd]. 5 298 46.358 T 14-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CF65_02722 36e00eed67ed5868cd5ac37db1bc787a 298 SUPERFAMILY SSF53927 19 154 7.03E-40 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CF65_02722 36e00eed67ed5868cd5ac37db1bc787a 298 Gene3D G3DSA:3.40.140.10 36 184 1.2E-41 T 14-10-2018 CF65_02722 36e00eed67ed5868cd5ac37db1bc787a 298 Gene3D G3DSA:3.40.140.10 185 294 1.1E-23 T 14-10-2018 CF65_02722 36e00eed67ed5868cd5ac37db1bc787a 298 PIRSF PIRSF006334 19 298 4.0E-102 T 14-10-2018 CF65_02722 36e00eed67ed5868cd5ac37db1bc787a 298 SUPERFAMILY SSF53927 158 295 4.52E-35 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CF65_02722 36e00eed67ed5868cd5ac37db1bc787a 298 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 162 277 5.0E-42 T 14-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CF65_02722 36e00eed67ed5868cd5ac37db1bc787a 298 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 107 141 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CF65_02722 36e00eed67ed5868cd5ac37db1bc787a 298 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 65 146 6.6E-14 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CF65_01498 3a646be3f5fb511024b1ccb634b6807c 72 Gene3D G3DSA:1.20.5.340 1 72 9.6E-21 T 14-10-2018 CF65_01498 3a646be3f5fb511024b1ccb634b6807c 72 Pfam PF06005 Cell division protein ZapB 1 67 7.6E-22 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CF65_01498 3a646be3f5fb511024b1ccb634b6807c 72 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 72 15.381 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CF65_00930 69b34e2fe829b165a0b6ebd734f0a08f 304 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 81 231 1.6E-13 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 CF65_00930 69b34e2fe829b165a0b6ebd734f0a08f 304 SUPERFAMILY SSF52540 3 303 1.89E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00930 69b34e2fe829b165a0b6ebd734f0a08f 304 Gene3D G3DSA:3.40.50.300 1 304 1.3E-88 T 14-10-2018 CF65_00930 69b34e2fe829b165a0b6ebd734f0a08f 304 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 2 304 5.3E-163 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CF65_00930 69b34e2fe829b165a0b6ebd734f0a08f 304 PIRSF PIRSF000545 1 304 1.6E-140 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CF65_00930 69b34e2fe829b165a0b6ebd734f0a08f 304 Hamap MF_00215 Pantothenate kinase [coaA]. 1 304 171.636 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 SUPERFAMILY SSF57770 142 176 4.71E-12 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 Gene3D G3DSA:2.20.28.20 142 176 1.1E-158 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 SUPERFAMILY SSF50249 579 685 3.92E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 Gene3D G3DSA:3.40.50.620 8 384 1.1E-158 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 Gene3D G3DSA:1.10.730.10 389 526 6.3E-33 T 14-10-2018 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 SUPERFAMILY SSF47323 389 546 4.11E-45 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 Pfam PF09334 tRNA synthetases class I (M) 8 396 3.2E-164 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 549 686 5.7E-49 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.303 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 Gene3D G3DSA:2.40.50.140 576 686 3.8E-32 T 14-10-2018 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 535 1.6E-199 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 4.0E-26 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 4.0E-26 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 4.0E-26 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 4.0E-26 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 4.0E-26 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 4.0E-26 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 SUPERFAMILY SSF52374 4 387 1.66E-103 T 14-10-2018 CF65_00717 fead3b44e67dd629bcdae97c70c8657a 686 Pfam PF01588 Putative tRNA binding domain 590 683 8.7E-24 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CF65_01757 e8feb76026d6812fcf0d45be010e642d 207 Gene3D G3DSA:3.40.50.300 2 207 5.3E-52 T 14-10-2018 CF65_01757 e8feb76026d6812fcf0d45be010e642d 207 Pfam PF00005 ABC transporter 20 166 7.8E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01757 e8feb76026d6812fcf0d45be010e642d 207 SUPERFAMILY SSF52540 4 207 3.12E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01757 e8feb76026d6812fcf0d45be010e642d 207 SMART SM00382 28 207 7.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02140 d2d0362702008d2163abc0c87037828f 914 SMART SM00382 32 220 4.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02140 d2d0362702008d2163abc0c87037828f 914 SMART SM00382 297 488 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02140 d2d0362702008d2163abc0c87037828f 914 Gene3D G3DSA:3.40.50.300 262 512 2.6E-64 T 14-10-2018 CF65_02140 d2d0362702008d2163abc0c87037828f 914 Pfam PF12698 ABC-2 family transporter protein 566 905 1.3E-37 T 14-10-2018 CF65_02140 d2d0362702008d2163abc0c87037828f 914 Pfam PF00005 ABC transporter 24 170 3.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02140 d2d0362702008d2163abc0c87037828f 914 SUPERFAMILY SSF52540 6 235 6.53E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02140 d2d0362702008d2163abc0c87037828f 914 SUPERFAMILY SSF52540 271 491 8.99E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02140 d2d0362702008d2163abc0c87037828f 914 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02140 d2d0362702008d2163abc0c87037828f 914 Gene3D G3DSA:3.40.50.300 2 252 8.1E-61 T 14-10-2018 CF65_02140 d2d0362702008d2163abc0c87037828f 914 Pfam PF00005 ABC transporter 288 432 7.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01925 8e1f42f673da21f362e041e3ee27d657 320 SUPERFAMILY SSF52540 102 291 5.2E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01925 8e1f42f673da21f362e041e3ee27d657 320 Pfam PF04851 Type III restriction enzyme, res subunit 123 287 1.9E-12 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CF65_01925 8e1f42f673da21f362e041e3ee27d657 320 Gene3D G3DSA:3.40.50.300 138 308 5.6E-11 T 14-10-2018 CF65_01033 5c390a0590128ff3b05561210b13a2f1 396 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 207 1.2E-91 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CF65_01033 5c390a0590128ff3b05561210b13a2f1 396 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 396 38.086 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CF65_01033 5c390a0590128ff3b05561210b13a2f1 396 Pfam PF11973 NQRA C-terminal domain 212 261 1.7E-22 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 CF65_01033 5c390a0590128ff3b05561210b13a2f1 396 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 1 396 1.4E-181 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CF65_02206 9d91694066f7f246000657abace8b307 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 53 375 1.7E-46 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CF65_02206 9d91694066f7f246000657abace8b307 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 81 95 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CF65_02206 9d91694066f7f246000657abace8b307 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 390 2.3E-189 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CF65_02206 9d91694066f7f246000657abace8b307 397 Gene3D G3DSA:3.40.50.1100 55 385 2.4E-182 T 14-10-2018 CF65_02206 9d91694066f7f246000657abace8b307 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 3 392 48.901 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CF65_02206 9d91694066f7f246000657abace8b307 397 PIRSF PIRSF001413 2 397 1.5E-165 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CF65_02206 9d91694066f7f246000657abace8b307 397 Gene3D G3DSA:3.40.50.1100 11 206 2.4E-182 T 14-10-2018 CF65_02206 9d91694066f7f246000657abace8b307 397 SUPERFAMILY SSF53686 7 391 7.07E-142 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_02243 491167dfe76cb62b890b26e225d584f0 322 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 19 272 5.4E-92 T 14-10-2018 IPR010119 Gluconeogenesis factor CF65_02243 491167dfe76cb62b890b26e225d584f0 322 SUPERFAMILY SSF142338 18 301 1.2E-83 T 14-10-2018 CF65_02243 491167dfe76cb62b890b26e225d584f0 322 Pfam PF01933 Uncharacterised protein family UPF0052 19 293 3.3E-74 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CF65_02243 491167dfe76cb62b890b26e225d584f0 322 Hamap MF_00973 Gluconeogenesis factor. 15 306 31.358 T 14-10-2018 IPR010119 Gluconeogenesis factor CF65_02243 491167dfe76cb62b890b26e225d584f0 322 Gene3D G3DSA:3.40.50.12300 14 316 3.4E-79 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily CF65_02774 69a69aa224756c528f6d95303733730a 462 ProSitePatterns PS01276 Peptidase family U32 signature. 165 183 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CF65_02774 69a69aa224756c528f6d95303733730a 462 Pfam PF16325 Peptidase family U32 C-terminal domain 365 447 8.9E-19 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal CF65_02774 69a69aa224756c528f6d95303733730a 462 Pfam PF01136 Peptidase family U32 78 349 3.6E-95 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CF65_02774 69a69aa224756c528f6d95303733730a 462 Gene3D G3DSA:2.40.30.10 361 448 1.4E-10 T 14-10-2018 CF65_01145 72d6800eb92851f5597987104ce1aab3 301 SUPERFAMILY SSF55681 8 292 9.77E-133 T 14-10-2018 CF65_01145 72d6800eb92851f5597987104ce1aab3 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.0E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01145 72d6800eb92851f5597987104ce1aab3 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.0E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01145 72d6800eb92851f5597987104ce1aab3 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.0E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01145 72d6800eb92851f5597987104ce1aab3 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.0E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01145 72d6800eb92851f5597987104ce1aab3 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.0E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01145 72d6800eb92851f5597987104ce1aab3 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.0E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01145 72d6800eb92851f5597987104ce1aab3 301 Gene3D G3DSA:3.30.930.10 1 214 7.8E-111 T 14-10-2018 CF65_01145 72d6800eb92851f5597987104ce1aab3 301 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 5.0E-149 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01145 72d6800eb92851f5597987104ce1aab3 301 Gene3D G3DSA:1.20.58.180 215 297 4.1E-33 T 14-10-2018 CF65_01145 72d6800eb92851f5597987104ce1aab3 301 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 1.6E-177 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01145 72d6800eb92851f5597987104ce1aab3 301 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.182 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CF65_01981 9b7824bf02e41eb74509169003c355c8 691 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 101 686 5.8E-200 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CF65_01981 9b7824bf02e41eb74509169003c355c8 691 SUPERFAMILY SSF51445 128 685 9.68E-145 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily CF65_01981 9b7824bf02e41eb74509169003c355c8 691 Gene3D G3DSA:3.20.20.80 141 688 9.1E-123 T 14-10-2018 CF65_01981 9b7824bf02e41eb74509169003c355c8 691 Pfam PF02446 4-alpha-glucanotransferase 149 666 4.5E-129 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CF65_01804 ed15a90c6d88e0eeba074650b69f189e 295 SUPERFAMILY SSF51735 1 291 1.39E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01804 ed15a90c6d88e0eeba074650b69f189e 295 Pfam PF08338 Domain of unknown function (DUF1731) 247 291 1.4E-17 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 CF65_01804 ed15a90c6d88e0eeba074650b69f189e 295 Gene3D G3DSA:3.40.50.720 1 284 1.4E-72 T 14-10-2018 CF65_01804 ed15a90c6d88e0eeba074650b69f189e 295 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 289 1.1E-97 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 CF65_01804 ed15a90c6d88e0eeba074650b69f189e 295 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 1.0E-17 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CF65_02574 69f35aa40f2b557a1bd1487b99dc2350 450 Gene3D G3DSA:1.10.3210.10 3 210 1.4E-61 T 14-10-2018 CF65_02574 69f35aa40f2b557a1bd1487b99dc2350 450 Gene3D G3DSA:1.10.3210.10 230 450 2.6E-41 T 14-10-2018 CF65_02574 69f35aa40f2b557a1bd1487b99dc2350 450 Pfam PF13286 Phosphohydrolase-associated domain 359 449 8.1E-27 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain CF65_02574 69f35aa40f2b557a1bd1487b99dc2350 450 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 6 450 32.887 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 CF65_02574 69f35aa40f2b557a1bd1487b99dc2350 450 Pfam PF01966 HD domain 61 209 4.5E-9 T 14-10-2018 IPR006674 HD domain CF65_02574 69f35aa40f2b557a1bd1487b99dc2350 450 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 23 450 1.2E-116 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CF65_02574 69f35aa40f2b557a1bd1487b99dc2350 450 SMART SM00471 57 283 7.2E-9 T 14-10-2018 IPR003607 HD/PDEase domain CF65_02574 69f35aa40f2b557a1bd1487b99dc2350 450 SUPERFAMILY SSF109604 21 449 1.35E-74 T 14-10-2018 CF65_02821 9080a2e949b80c05be53e06c96396a1f 147 Gene3D G3DSA:3.40.630.30 2 147 2.6E-38 T 14-10-2018 CF65_02821 9080a2e949b80c05be53e06c96396a1f 147 Pfam PF00583 Acetyltransferase (GNAT) family 45 120 3.5E-12 T 14-10-2018 IPR000182 GNAT domain CF65_02821 9080a2e949b80c05be53e06c96396a1f 147 SUPERFAMILY SSF55729 2 146 8.06E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase CF65_02821 9080a2e949b80c05be53e06c96396a1f 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 143 1.4E-39 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CF65_01228 3c17169f4ee9a18303cfe70e3733e5fd 104 SMART SM01374 1 104 4.7E-62 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CF65_01228 3c17169f4ee9a18303cfe70e3733e5fd 104 Pfam PF00238 Ribosomal protein L14p/L23e 1 104 2.2E-43 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CF65_01228 3c17169f4ee9a18303cfe70e3733e5fd 104 SUPERFAMILY SSF50193 1 103 1.24E-41 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 CF65_01228 3c17169f4ee9a18303cfe70e3733e5fd 104 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 104 17.625 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CF65_01228 3c17169f4ee9a18303cfe70e3733e5fd 104 Gene3D G3DSA:2.40.150.20 1 104 7.6E-46 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 CF65_01228 3c17169f4ee9a18303cfe70e3733e5fd 104 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 104 7.8E-49 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CF65_01228 3c17169f4ee9a18303cfe70e3733e5fd 104 ProSitePatterns PS00049 Ribosomal protein L14 signature. 41 67 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00244 42a937fafc8d18e5eb6c4a92494d07fa 230 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 166 182 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CF65_00244 42a937fafc8d18e5eb6c4a92494d07fa 230 Gene3D G3DSA:3.20.20.140 1 230 1.3E-60 T 14-10-2018 CF65_00244 42a937fafc8d18e5eb6c4a92494d07fa 230 PIRSF PIRSF005902 1 230 1.9E-55 T 14-10-2018 IPR001130 TatD family GO:0016788 CF65_00244 42a937fafc8d18e5eb6c4a92494d07fa 230 Pfam PF01026 TatD related DNase 1 228 1.1E-53 T 14-10-2018 IPR001130 TatD family GO:0016788 CF65_00244 42a937fafc8d18e5eb6c4a92494d07fa 230 SUPERFAMILY SSF51556 1 229 1.11E-56 T 14-10-2018 IPR032466 Metal-dependent hydrolase CF65_00287 dbfd9bca4d33797584947ecac613e9c1 90 SUPERFAMILY SSF53633 37 89 1.54E-11 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CF65_00287 dbfd9bca4d33797584947ecac613e9c1 90 Pfam PF00696 Amino acid kinase family 37 86 2.9E-8 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CF65_00287 dbfd9bca4d33797584947ecac613e9c1 90 Gene3D G3DSA:3.40.1160.10 33 90 6.2E-15 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CF65_01554 57941d54a1d3501875ff2002b67a4539 205 Pfam PF01914 MarC family integral membrane protein 3 200 1.0E-43 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CF65_01554 57941d54a1d3501875ff2002b67a4539 205 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 197 1.9E-40 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CF65_02556 b2ec793388e1d4bbc1e464d6ad2fe0d4 152 SUPERFAMILY SSF52335 5 151 6.8E-58 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CF65_02556 b2ec793388e1d4bbc1e464d6ad2fe0d4 152 Gene3D G3DSA:3.40.50.1380 1 152 2.1E-65 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CF65_02556 b2ec793388e1d4bbc1e464d6ad2fe0d4 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CF65_02556 b2ec793388e1d4bbc1e464d6ad2fe0d4 152 Pfam PF02142 MGS-like domain 26 117 4.5E-18 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain CF65_02556 b2ec793388e1d4bbc1e464d6ad2fe0d4 152 SMART SM00851 25 118 3.2E-23 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain CF65_02556 b2ec793388e1d4bbc1e464d6ad2fe0d4 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.605 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CF65_02556 b2ec793388e1d4bbc1e464d6ad2fe0d4 152 PIRSF PIRSF006614 8 151 2.4E-65 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CF65_02556 b2ec793388e1d4bbc1e464d6ad2fe0d4 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 1.1E-68 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CF65_01059 cd8aa29b44fadf02d7f774aaff38f14e 214 Pfam PF00156 Phosphoribosyl transferase domain 41 150 6.5E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CF65_01059 cd8aa29b44fadf02d7f774aaff38f14e 214 SUPERFAMILY SSF53271 2 211 2.98E-46 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like CF65_01059 cd8aa29b44fadf02d7f774aaff38f14e 214 Gene3D G3DSA:3.40.50.2020 1 213 1.1E-72 T 14-10-2018 CF65_01059 cd8aa29b44fadf02d7f774aaff38f14e 214 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 2.7E-66 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CF65_01059 cd8aa29b44fadf02d7f774aaff38f14e 214 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 214 33.964 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CF65_02262 37d6231aceb02ffdafe992e244119538 142 PIRSF PIRSF002181 1 142 9.7E-51 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CF65_02262 37d6231aceb02ffdafe992e244119538 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 8.4E-68 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02262 37d6231aceb02ffdafe992e244119538 142 Pfam PF00572 Ribosomal protein L13 15 138 1.5E-57 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CF65_02262 37d6231aceb02ffdafe992e244119538 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CF65_02262 37d6231aceb02ffdafe992e244119538 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.544 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CF65_02262 37d6231aceb02ffdafe992e244119538 142 Gene3D G3DSA:3.90.1180.10 1 142 2.7E-65 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 CF65_02262 37d6231aceb02ffdafe992e244119538 142 SUPERFAMILY SSF52161 1 140 2.22E-60 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 Pfam PF01926 50S ribosome-binding GTPase 216 333 9.3E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 Pfam PF10396 GTP-binding protein TrmE N-terminus 4 118 7.9E-35 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 PRINTS PR00449 Transforming protein P21 ras signature 215 236 9.4E-5 T 14-10-2018 CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 PRINTS PR00449 Transforming protein P21 ras signature 323 336 9.4E-5 T 14-10-2018 CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 Gene3D G3DSA:1.20.120.430 120 451 2.1E-100 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 Gene3D G3DSA:3.40.50.300 215 379 2.1E-100 T 14-10-2018 CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 Pfam PF12631 MnmE helical domain 121 448 1.4E-58 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 SUPERFAMILY SSF116878 119 451 2.09E-49 T 14-10-2018 CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 214 367 3.1E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 Gene3D G3DSA:3.30.1360.120 1 119 5.2E-38 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 SUPERFAMILY SSF52540 70 369 7.57E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 9 451 1.1E-101 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CF65_03010 3f6b285b7df25c2f1c04a067638e4d09 451 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 3 451 32.352 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CF65_01432 2aab92c5b577ff7ac6dddc31f6b4a08f 324 SUPERFAMILY SSF53474 32 318 1.23E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_01432 2aab92c5b577ff7ac6dddc31f6b4a08f 324 Pfam PF12146 Serine aminopeptidase, S33 53 304 5.6E-42 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 CF65_01432 2aab92c5b577ff7ac6dddc31f6b4a08f 324 Gene3D G3DSA:3.40.50.1820 27 322 5.2E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_02917 25957c10c9f9c2b4ff7a6594a53b303f 369 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 192 206 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CF65_02917 25957c10c9f9c2b4ff7a6594a53b303f 369 PIRSF PIRSF001434 1 369 6.0E-121 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CF65_02917 25957c10c9f9c2b4ff7a6594a53b303f 369 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 365 1.9E-136 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CF65_02917 25957c10c9f9c2b4ff7a6594a53b303f 369 Gene3D G3DSA:3.90.1150.10 282 366 8.4E-26 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_02917 25957c10c9f9c2b4ff7a6594a53b303f 369 Gene3D G3DSA:3.90.1150.10 250 281 1.7E-8 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_02917 25957c10c9f9c2b4ff7a6594a53b303f 369 Gene3D G3DSA:3.40.640.10 5 249 3.8E-84 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_02917 25957c10c9f9c2b4ff7a6594a53b303f 369 SUPERFAMILY SSF53383 17 366 2.53E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00475 4344c9f2ca5ce091ff1963d61d2340e4 194 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 129 135 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CF65_00475 4344c9f2ca5ce091ff1963d61d2340e4 194 PIRSF PIRSF004553 13 194 2.1E-53 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CF65_00475 4344c9f2ca5ce091ff1963d61d2340e4 194 SUPERFAMILY SSF53335 14 192 6.58E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00475 4344c9f2ca5ce091ff1963d61d2340e4 194 Gene3D G3DSA:3.40.50.150 6 194 9.0E-63 T 14-10-2018 CF65_00475 4344c9f2ca5ce091ff1963d61d2340e4 194 Pfam PF03602 Conserved hypothetical protein 95 14 192 6.4E-64 T 14-10-2018 CF65_00475 4344c9f2ca5ce091ff1963d61d2340e4 194 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 11 192 1.7E-69 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CF65_01062 b5d98401321100331059de8351996132 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 3.2E-12 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CF65_01062 b5d98401321100331059de8351996132 238 SUPERFAMILY SSF54211 1 181 1.21E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CF65_01062 b5d98401321100331059de8351996132 238 SUPERFAMILY SSF55666 151 237 3.4E-26 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CF65_01062 b5d98401321100331059de8351996132 238 Gene3D G3DSA:3.30.230.70 10 238 9.1E-64 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CF65_01062 b5d98401321100331059de8351996132 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.6E-112 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CF65_01062 b5d98401321100331059de8351996132 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.787 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CF65_01062 b5d98401321100331059de8351996132 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site CF65_01062 b5d98401321100331059de8351996132 238 Pfam PF01138 3' exoribonuclease family, domain 1 12 140 2.4E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CF65_01438 b50f6d4b3faaa0b4dcc4c57f6605438e 231 Gene3D G3DSA:3.90.730.10 51 194 1.2E-21 T 14-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CF65_01438 b50f6d4b3faaa0b4dcc4c57f6605438e 231 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 146 157 - T 14-10-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 CF65_01438 b50f6d4b3faaa0b4dcc4c57f6605438e 231 Pfam PF00445 Ribonuclease T2 family 61 178 2.2E-11 T 14-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CF65_01438 b50f6d4b3faaa0b4dcc4c57f6605438e 231 SUPERFAMILY SSF55895 59 228 7.33E-30 T 14-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CF65_00759 41947c87a307ac60fe9cb4598342985e 406 Gene3D G3DSA:3.40.47.10 259 405 2.7E-49 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_00759 41947c87a307ac60fe9cb4598342985e 406 SMART SM00825 Beta-ketoacyl synthase 4 406 1.3E-13 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CF65_00759 41947c87a307ac60fe9cb4598342985e 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site CF65_00759 41947c87a307ac60fe9cb4598342985e 406 Gene3D G3DSA:3.40.47.10 6 258 2.1E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_00759 41947c87a307ac60fe9cb4598342985e 406 SUPERFAMILY SSF53901 214 404 2.47E-61 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_00759 41947c87a307ac60fe9cb4598342985e 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 360 1.4E-31 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CF65_00759 41947c87a307ac60fe9cb4598342985e 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 245 8.0E-42 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CF65_00759 41947c87a307ac60fe9cb4598342985e 406 SUPERFAMILY SSF53901 1 252 6.02E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_00964 38ada18e5d1988d3e60c294ea864307b 538 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 263 278 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CF65_00964 38ada18e5d1988d3e60c294ea864307b 538 Gene3D G3DSA:3.90.228.20 233 522 1.4E-238 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CF65_00964 38ada18e5d1988d3e60c294ea864307b 538 SUPERFAMILY SSF53795 228 537 1.03E-126 T 14-10-2018 CF65_00964 38ada18e5d1988d3e60c294ea864307b 538 PIRSF PIRSF006294 1 538 1.3E-228 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CF65_00964 38ada18e5d1988d3e60c294ea864307b 538 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 488 1.7E-210 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CF65_00964 38ada18e5d1988d3e60c294ea864307b 538 Gene3D G3DSA:2.170.8.10 46 348 1.4E-238 T 14-10-2018 CF65_00964 38ada18e5d1988d3e60c294ea864307b 538 SUPERFAMILY SSF68923 10 225 1.26E-88 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CF65_00964 38ada18e5d1988d3e60c294ea864307b 538 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 538 54.691 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CF65_00964 38ada18e5d1988d3e60c294ea864307b 538 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 3 537 1.8E-290 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CF65_00964 38ada18e5d1988d3e60c294ea864307b 538 Gene3D G3DSA:3.40.449.10 22 232 1.4E-238 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CF65_01398 fa09af0fbdea6bda62799f8ad8a6d45a 241 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 29 239 7.0E-74 T 14-10-2018 CF65_01398 fa09af0fbdea6bda62799f8ad8a6d45a 241 SUPERFAMILY SSF56112 44 203 5.19E-16 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily CF65_01398 fa09af0fbdea6bda62799f8ad8a6d45a 241 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 241 42.99 T 14-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 CF65_01398 fa09af0fbdea6bda62799f8ad8a6d45a 241 Gene3D G3DSA:1.10.510.10 140 241 1.0E-14 T 14-10-2018 CF65_00164 8b59244c965750d00ffe094b19b01f30 207 Pfam PF01121 Dephospho-CoA kinase 3 179 1.2E-72 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CF65_00164 8b59244c965750d00ffe094b19b01f30 207 SUPERFAMILY SSF52540 1 192 7.07E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00164 8b59244c965750d00ffe094b19b01f30 207 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.982 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CF65_00164 8b59244c965750d00ffe094b19b01f30 207 Gene3D G3DSA:3.40.50.300 1 205 9.5E-70 T 14-10-2018 CF65_00164 8b59244c965750d00ffe094b19b01f30 207 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 2.0E-67 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CF65_00974 1b6dd2a1eb56251f7673ba8b4ebe253f 611 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 611 2.4E-264 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CF65_00974 1b6dd2a1eb56251f7673ba8b4ebe253f 611 Pfam PF13522 Glutamine amidotransferase domain 60 181 2.0E-21 T 14-10-2018 CF65_00974 1b6dd2a1eb56251f7673ba8b4ebe253f 611 SUPERFAMILY SSF56235 2 228 1.03E-74 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CF65_00974 1b6dd2a1eb56251f7673ba8b4ebe253f 611 Gene3D G3DSA:3.40.50.10490 449 596 4.8E-147 T 14-10-2018 CF65_00974 1b6dd2a1eb56251f7673ba8b4ebe253f 611 Gene3D G3DSA:3.60.20.10 2 242 2.0E-82 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CF65_00974 1b6dd2a1eb56251f7673ba8b4ebe253f 611 SUPERFAMILY SSF53697 246 611 6.23E-114 T 14-10-2018 CF65_00974 1b6dd2a1eb56251f7673ba8b4ebe253f 611 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 611 40.975 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CF65_00974 1b6dd2a1eb56251f7673ba8b4ebe253f 611 Pfam PF01380 SIS domain 291 420 1.4E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CF65_00974 1b6dd2a1eb56251f7673ba8b4ebe253f 611 Pfam PF01380 SIS domain 464 593 8.4E-27 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CF65_00974 1b6dd2a1eb56251f7673ba8b4ebe253f 611 Gene3D G3DSA:3.40.50.10490 250 610 4.8E-147 T 14-10-2018 CF65_00290 4a3da52a7c80f5f1ae9987bb6bb0193d 154 Pfam PF12821 Threonine/Serine exporter, ThrE 10 144 4.0E-35 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE CF65_00387 54ffdb139e6e1f49f198dff3fead2dc0 150 Gene3D G3DSA:3.30.70.920 56 138 1.7E-30 T 14-10-2018 CF65_00387 54ffdb139e6e1f49f198dff3fead2dc0 150 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 1.9E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CF65_00387 54ffdb139e6e1f49f198dff3fead2dc0 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CF65_00387 54ffdb139e6e1f49f198dff3fead2dc0 150 Pfam PF01037 Lrp/AsnC ligand binding domain 74 141 5.7E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CF65_00387 54ffdb139e6e1f49f198dff3fead2dc0 150 SUPERFAMILY SSF54909 65 146 4.69E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel CF65_00387 54ffdb139e6e1f49f198dff3fead2dc0 150 SUPERFAMILY SSF46785 3 64 1.61E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00387 54ffdb139e6e1f49f198dff3fead2dc0 150 SMART SM00344 4 111 1.4E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CF65_00387 54ffdb139e6e1f49f198dff3fead2dc0 150 Gene3D G3DSA:1.10.10.10 1 55 2.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00387 54ffdb139e6e1f49f198dff3fead2dc0 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.0E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CF65_00387 54ffdb139e6e1f49f198dff3fead2dc0 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.0E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CF65_00387 54ffdb139e6e1f49f198dff3fead2dc0 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.0E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CF65_02150 34083da0ae5fad822d315b2f00c976ce 71 Gene3D G3DSA:1.10.260.40 2 71 8.6E-27 T 14-10-2018 CF65_02150 34083da0ae5fad822d315b2f00c976ce 71 Pfam PF13693 Winged helix-turn-helix DNA-binding 9 71 3.6E-23 T 14-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain CF65_02150 34083da0ae5fad822d315b2f00c976ce 71 SUPERFAMILY SSF47413 4 71 1.35E-23 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_00982 5db0aac3826f95a66a2320c19ef95924 326 PRINTS PR00069 Aldo-keto reductase signature 43 67 2.2E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CF65_00982 5db0aac3826f95a66a2320c19ef95924 326 PRINTS PR00069 Aldo-keto reductase signature 106 124 2.2E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CF65_00982 5db0aac3826f95a66a2320c19ef95924 326 PRINTS PR00069 Aldo-keto reductase signature 239 263 2.2E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CF65_00982 5db0aac3826f95a66a2320c19ef95924 326 SUPERFAMILY SSF51430 1 311 6.94E-96 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CF65_00982 5db0aac3826f95a66a2320c19ef95924 326 Pfam PF00248 Aldo/keto reductase family 15 305 2.9E-71 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain CF65_00982 5db0aac3826f95a66a2320c19ef95924 326 Gene3D G3DSA:3.20.20.100 1 325 1.9E-112 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CF65_01387 7eac00415b48f298552a7c162745bb2e 115 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 17 114 1.0E-33 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CF65_01387 7eac00415b48f298552a7c162745bb2e 115 Hamap MF_00720 Primosomal replication protein N [priB]. 16 114 22.871 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CF65_01387 7eac00415b48f298552a7c162745bb2e 115 Gene3D G3DSA:2.40.50.140 7 115 3.7E-30 T 14-10-2018 CF65_01387 7eac00415b48f298552a7c162745bb2e 115 PIRSF PIRSF003135 8 115 1.9E-46 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CF65_01387 7eac00415b48f298552a7c162745bb2e 115 SUPERFAMILY SSF50249 13 115 5.78E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01387 7eac00415b48f298552a7c162745bb2e 115 Pfam PF00436 Single-strand binding protein family 17 106 1.6E-12 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CF65_02527 e4a49d25e02587cc8a77136ed4672e24 95 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 2.8E-41 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CF65_02527 e4a49d25e02587cc8a77136ed4672e24 95 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.3E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_02527 e4a49d25e02587cc8a77136ed4672e24 95 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.3E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_02527 e4a49d25e02587cc8a77136ed4672e24 95 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.3E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_02527 e4a49d25e02587cc8a77136ed4672e24 95 SUPERFAMILY SSF47729 1 91 1.28E-28 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CF65_02527 e4a49d25e02587cc8a77136ed4672e24 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CF65_02527 e4a49d25e02587cc8a77136ed4672e24 95 SMART SM00411 1 91 6.0E-40 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_02527 e4a49d25e02587cc8a77136ed4672e24 95 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.5E-28 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CF65_02527 e4a49d25e02587cc8a77136ed4672e24 95 Gene3D G3DSA:4.10.520.10 1 94 8.6E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CF65_02527 e4a49d25e02587cc8a77136ed4672e24 95 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.781 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CF65_01115 ba287ceb55218a6fa1ecfb4cfc077da2 243 Pfam PF00756 Putative esterase 1 235 2.9E-69 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CF65_01115 ba287ceb55218a6fa1ecfb4cfc077da2 243 SUPERFAMILY SSF53474 1 241 4.05E-77 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_01115 ba287ceb55218a6fa1ecfb4cfc077da2 243 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 1 241 3.6E-109 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 CF65_01115 ba287ceb55218a6fa1ecfb4cfc077da2 243 Gene3D G3DSA:3.40.50.1820 1 242 9.2E-90 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_00662 b67ed187f66be4a87e6391ce2735467f 260 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 2 258 8.3E-127 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 CF65_00662 b67ed187f66be4a87e6391ce2735467f 260 Gene3D G3DSA:3.90.1150.10 124 260 2.1E-44 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_00662 b67ed187f66be4a87e6391ce2735467f 260 SUPERFAMILY SSF53383 4 256 4.83E-64 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00662 b67ed187f66be4a87e6391ce2735467f 260 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 67 81 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CF65_00662 b67ed187f66be4a87e6391ce2735467f 260 Gene3D G3DSA:3.40.640.10 2 123 2.9E-34 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_00662 b67ed187f66be4a87e6391ce2735467f 260 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 256 2.3E-83 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CF65_00401 f4d065299a7347c77ea60e4250a5e1e1 198 Gene3D G3DSA:3.10.50.40 3 153 8.3E-57 T 14-10-2018 CF65_00401 f4d065299a7347c77ea60e4250a5e1e1 198 Gene3D G3DSA:2.40.10.330 71 121 8.3E-57 T 14-10-2018 CF65_00401 f4d065299a7347c77ea60e4250a5e1e1 198 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 5.9E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CF65_00401 f4d065299a7347c77ea60e4250a5e1e1 198 SUPERFAMILY SSF54534 2 140 4.12E-34 T 14-10-2018 CF65_02710 eeaa9ccff565b4f351fa1ef0197ed45f 186 Gene3D G3DSA:3.30.1380.10 76 186 4.3E-10 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CF65_02710 eeaa9ccff565b4f351fa1ef0197ed45f 186 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 183 9.3E-61 T 14-10-2018 IPR010275 Protein of unknown function DUF882 CF65_02710 eeaa9ccff565b4f351fa1ef0197ed45f 186 SUPERFAMILY SSF55166 69 184 4.97E-31 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CF65_00654 1adaf729c4d65cfaba42b5c30c827a4d 477 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 461 6.5E-102 T 14-10-2018 IPR010352 Protein of unknown function DUF945 CF65_02719 ad5190f87c2eee452cf5c9edf5aef7f1 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 5.0E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_02719 ad5190f87c2eee452cf5c9edf5aef7f1 286 SUPERFAMILY SSF161098 6 275 1.4E-53 T 14-10-2018 IPR035906 MetI-like superfamily CF65_02719 ad5190f87c2eee452cf5c9edf5aef7f1 286 Gene3D G3DSA:1.10.3720.10 7 281 1.9E-53 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01077 3fea16f833824f75cf17a0c1946a33bb 169 SUPERFAMILY SSF53098 3 162 6.26E-26 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_01077 3fea16f833824f75cf17a0c1946a33bb 169 Pfam PF13333 Integrase core domain 113 168 1.4E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CF65_00010 3fea16f833824f75cf17a0c1946a33bb 169 SUPERFAMILY SSF53098 3 162 6.26E-26 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_00010 3fea16f833824f75cf17a0c1946a33bb 169 Pfam PF13333 Integrase core domain 113 168 1.4E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CF65_01287 3fea16f833824f75cf17a0c1946a33bb 169 SUPERFAMILY SSF53098 3 162 6.26E-26 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_01287 3fea16f833824f75cf17a0c1946a33bb 169 Pfam PF13333 Integrase core domain 113 168 1.4E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CF65_02342 3fea16f833824f75cf17a0c1946a33bb 169 SUPERFAMILY SSF53098 3 162 6.26E-26 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_02342 3fea16f833824f75cf17a0c1946a33bb 169 Pfam PF13333 Integrase core domain 113 168 1.4E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CF65_02827 1fd002b762fb1b52a17a5792e769ea48 173 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 25 2.1E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site CF65_02827 1fd002b762fb1b52a17a5792e769ea48 173 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 6.5E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site CF65_02827 1fd002b762fb1b52a17a5792e769ea48 173 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site CF65_02827 1fd002b762fb1b52a17a5792e769ea48 173 SUPERFAMILY SSF54523 5 88 2.9E-12 T 14-10-2018 CF65_02827 1fd002b762fb1b52a17a5792e769ea48 173 Gene3D G3DSA:3.30.700.10 5 151 4.0E-5 T 14-10-2018 CF65_02024 8be31eb278a65055b8adf6235da9e58d 172 SUPERFAMILY SSF52218 7 170 3.28E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily CF65_02024 8be31eb278a65055b8adf6235da9e58d 172 Gene3D G3DSA:3.40.50.360 1 171 6.2E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily CF65_02024 8be31eb278a65055b8adf6235da9e58d 172 Pfam PF02525 Flavodoxin-like fold 8 167 3.2E-34 T 14-10-2018 IPR003680 Flavodoxin-like fold CF65_02024 8be31eb278a65055b8adf6235da9e58d 172 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 3 169 21.304 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CF65_01765 9a77a863c24a0fad7ae9d90b4fcea8ec 267 SUPERFAMILY SSF46689 180 250 6.99E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01765 9a77a863c24a0fad7ae9d90b4fcea8ec 267 SUPERFAMILY SSF46689 85 176 1.54E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01765 9a77a863c24a0fad7ae9d90b4fcea8ec 267 Gene3D G3DSA:1.10.10.60 182 246 2.1E-25 T 14-10-2018 CF65_01765 9a77a863c24a0fad7ae9d90b4fcea8ec 267 Gene3D G3DSA:1.10.10.10 4 82 6.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01765 9a77a863c24a0fad7ae9d90b4fcea8ec 267 Pfam PF09039 Mu DNA binding, I gamma subdomain 154 249 3.1E-29 T 14-10-2018 IPR015126 Mu DNA binding, I gamma subdomain CF65_01765 9a77a863c24a0fad7ae9d90b4fcea8ec 267 Pfam PF02316 Mu DNA-binding domain 18 130 4.2E-13 T 14-10-2018 IPR003314 Mu-type HTH domain GO:0003677 CF65_01765 9a77a863c24a0fad7ae9d90b4fcea8ec 267 Gene3D G3DSA:1.10.10.60 83 170 1.2E-13 T 14-10-2018 CF65_01765 9a77a863c24a0fad7ae9d90b4fcea8ec 267 SUPERFAMILY SSF46955 5 77 7.6E-14 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily CF65_01298 ee41a5745dbbfe05d41358357063473c 130 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 16 120 3.0E-15 T 14-10-2018 CF65_01295 62498c16a62d6ab08f84eabad9bbbb36 362 Gene3D G3DSA:3.40.50.1970 1 171 6.1E-62 T 14-10-2018 CF65_01295 62498c16a62d6ab08f84eabad9bbbb36 362 Gene3D G3DSA:1.20.1090.10 172 360 6.0E-65 T 14-10-2018 CF65_01295 62498c16a62d6ab08f84eabad9bbbb36 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 71.258 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CF65_01295 62498c16a62d6ab08f84eabad9bbbb36 362 PIRSF PIRSF001455 6 360 1.7E-103 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CF65_01295 62498c16a62d6ab08f84eabad9bbbb36 362 Pfam PF01761 3-dehydroquinate synthase 66 324 9.2E-108 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CF65_01295 62498c16a62d6ab08f84eabad9bbbb36 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 352 4.4E-117 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CF65_01295 62498c16a62d6ab08f84eabad9bbbb36 362 SUPERFAMILY SSF56796 4 355 3.27E-116 T 14-10-2018 CF65_01756 782aa5308aa31771bd63a4be15b876a8 221 Pfam PF02361 Cobalt transport protein 20 211 7.3E-15 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component CF65_00396 f93e7116e6c4f164ce4c1f6a69cca0d3 94 Pfam PF03889 Domain of unknown function 26 62 3.9E-23 T 14-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 CF65_02219 d401ec6b189bf56706a3371bf85fabcd 365 Gene3D G3DSA:3.40.50.2300 155 291 7.7E-102 T 14-10-2018 CF65_02219 d401ec6b189bf56706a3371bf85fabcd 365 Gene3D G3DSA:3.40.50.2300 55 325 7.7E-102 T 14-10-2018 CF65_02219 d401ec6b189bf56706a3371bf85fabcd 365 SUPERFAMILY SSF53822 54 365 1.11E-82 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_02219 d401ec6b189bf56706a3371bf85fabcd 365 Pfam PF13407 Periplasmic binding protein domain 55 312 4.3E-52 T 14-10-2018 IPR025997 Periplasmic binding protein CF65_02763 9854cc8770b499e553359f2759d092f4 234 SUPERFAMILY SSF53098 3 186 6.51E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_02763 9854cc8770b499e553359f2759d092f4 234 Pfam PF00929 Exonuclease 11 176 3.0E-41 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_02763 9854cc8770b499e553359f2759d092f4 234 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 8 202 2.1E-87 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_02763 9854cc8770b499e553359f2759d092f4 234 Gene3D G3DSA:3.30.420.10 2 189 4.8E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CF65_02763 9854cc8770b499e553359f2759d092f4 234 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 9 201 5.1E-85 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_02763 9854cc8770b499e553359f2759d092f4 234 SMART SM00479 9 185 9.3E-55 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_02800 92740e3c0625ef66f2e54083da5290a8 648 Gene3D G3DSA:3.40.50.1220 218 399 3.7E-37 T 14-10-2018 CF65_02800 92740e3c0625ef66f2e54083da5290a8 648 SUPERFAMILY SSF52518 421 636 1.73E-50 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_02800 92740e3c0625ef66f2e54083da5290a8 648 Gene3D G3DSA:3.40.50.970 1 208 4.2E-31 T 14-10-2018 CF65_02800 92740e3c0625ef66f2e54083da5290a8 648 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 646 3.3E-294 T 14-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 CF65_02800 92740e3c0625ef66f2e54083da5290a8 648 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 480 499 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CF65_02800 92740e3c0625ef66f2e54083da5290a8 648 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 444 603 1.8E-37 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CF65_02800 92740e3c0625ef66f2e54083da5290a8 648 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 1.0E-33 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CF65_02800 92740e3c0625ef66f2e54083da5290a8 648 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 196 6.9E-32 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CF65_02800 92740e3c0625ef66f2e54083da5290a8 648 Gene3D G3DSA:3.40.50.970 415 615 1.6E-43 T 14-10-2018 CF65_02800 92740e3c0625ef66f2e54083da5290a8 648 SUPERFAMILY SSF52518 1 208 2.14E-33 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_02800 92740e3c0625ef66f2e54083da5290a8 648 SUPERFAMILY SSF52467 186 371 8.67E-43 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CF65_02291 a551ca9ce0f4cf4ee16584a4932bb09c 274 PIRSF PIRSF036480 13 274 1.0E-92 T 14-10-2018 CF65_02291 a551ca9ce0f4cf4ee16584a4932bb09c 274 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 16 274 7.5E-114 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CF65_02291 a551ca9ce0f4cf4ee16584a4932bb09c 274 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 95 117 3.9E-42 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CF65_02291 a551ca9ce0f4cf4ee16584a4932bb09c 274 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 117 144 3.9E-42 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CF65_02291 a551ca9ce0f4cf4ee16584a4932bb09c 274 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 18 44 3.9E-42 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CF65_02291 a551ca9ce0f4cf4ee16584a4932bb09c 274 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 50 62 3.9E-42 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CF65_02291 a551ca9ce0f4cf4ee16584a4932bb09c 274 Gene3D G3DSA:3.30.70.260 13 82 1.2E-13 T 14-10-2018 CF65_02291 a551ca9ce0f4cf4ee16584a4932bb09c 274 Pfam PF00551 Formyl transferase 94 230 5.7E-37 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CF65_02291 a551ca9ce0f4cf4ee16584a4932bb09c 274 SUPERFAMILY SSF55021 17 77 1.42E-6 T 14-10-2018 CF65_02291 a551ca9ce0f4cf4ee16584a4932bb09c 274 Gene3D G3DSA:3.40.50.170 93 274 4.6E-49 T 14-10-2018 CF65_02291 a551ca9ce0f4cf4ee16584a4932bb09c 274 SUPERFAMILY SSF53328 94 273 8.5E-49 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CF65_01231 2e0a3486318e6528d0ef326c49c80f51 101 SUPERFAMILY SSF57716 2 101 5.06E-38 T 14-10-2018 CF65_01231 2e0a3486318e6528d0ef326c49c80f51 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.871 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid CF65_01231 2e0a3486318e6528d0ef326c49c80f51 101 Gene3D G3DSA:4.10.830.10 41 101 1.1E-23 T 14-10-2018 CF65_01231 2e0a3486318e6528d0ef326c49c80f51 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01231 2e0a3486318e6528d0ef326c49c80f51 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 4.1E-27 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01097 618346b7f1b686ace4d6c830f83bb2a0 139 Gene3D G3DSA:1.20.120.330 1 136 2.9E-40 T 14-10-2018 CF65_01097 618346b7f1b686ace4d6c830f83bb2a0 139 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 9 131 2.9E-25 T 14-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CF65_01097 618346b7f1b686ace4d6c830f83bb2a0 139 SUPERFAMILY SSF81593 4 126 8.63E-34 T 14-10-2018 CF65_01097 618346b7f1b686ace4d6c830f83bb2a0 139 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 5 132 5.7E-36 T 14-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CF65_01758 6f43180ac8594c4dbe95839fb38e6087 269 SUPERFAMILY SSF52540 76 268 7.84E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01758 6f43180ac8594c4dbe95839fb38e6087 269 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 88 250 1.0E-36 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CF65_01758 6f43180ac8594c4dbe95839fb38e6087 269 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 60 268 5.2E-91 T 14-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 CF65_01758 6f43180ac8594c4dbe95839fb38e6087 269 Gene3D G3DSA:3.40.50.300 68 269 6.1E-64 T 14-10-2018 CF65_01758 6f43180ac8594c4dbe95839fb38e6087 269 PIRSF PIRSF005624 52 269 3.1E-94 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 CF65_02640 78698ee15c79123295f9c5af44b8af20 323 Pfam PF00535 Glycosyl transferase family 2 4 136 5.9E-21 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CF65_02640 78698ee15c79123295f9c5af44b8af20 323 Gene3D G3DSA:3.90.550.10 1 232 2.9E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02640 78698ee15c79123295f9c5af44b8af20 323 SUPERFAMILY SSF53448 1 286 1.22E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02864 15b1c46b88f7bd2094dea5d80ec5baa3 443 Pfam PF07690 Major Facilitator Superfamily 34 398 1.1E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CF65_02864 15b1c46b88f7bd2094dea5d80ec5baa3 443 SUPERFAMILY SSF103473 13 435 1.83E-78 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_02864 15b1c46b88f7bd2094dea5d80ec5baa3 443 PIRSF PIRSF002808 6 443 1.9E-153 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CF65_02864 15b1c46b88f7bd2094dea5d80ec5baa3 443 Gene3D G3DSA:1.20.1250.20 240 443 2.8E-54 T 14-10-2018 CF65_02864 15b1c46b88f7bd2094dea5d80ec5baa3 443 Gene3D G3DSA:1.20.1250.20 18 227 1.5E-54 T 14-10-2018 CF65_02864 15b1c46b88f7bd2094dea5d80ec5baa3 443 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 8.3E-143 T 14-10-2018 CF65_02568 9362ab9b658d1ba3364540b8a65e01d1 89 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 82 6.3E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CF65_02568 9362ab9b658d1ba3364540b8a65e01d1 89 SUPERFAMILY SSF52794 1 85 1.96E-19 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CF65_02568 9362ab9b658d1ba3364540b8a65e01d1 89 Gene3D G3DSA:3.40.50.2300 1 87 1.6E-20 T 14-10-2018 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 SUPERFAMILY SSF100920 381 534 7.85E-52 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 SUPERFAMILY SSF53067 19 197 6.66E-55 T 14-10-2018 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 SUPERFAMILY SSF53067 201 374 4.08E-49 T 14-10-2018 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 611 5.1E-269 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 SUPERFAMILY SSF100934 501 612 2.35E-36 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 Pfam PF00012 Hsp70 protein 21 596 1.1E-190 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 329 343 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 Gene3D G3DSA:2.60.34.10 376 517 3.7E-50 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 Gene3D G3DSA:1.20.1270.10 518 612 3.1E-28 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 Gene3D G3DSA:3.30.420.40 22 371 2.7E-113 T 14-10-2018 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 613 45.592 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 206 219 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 PRINTS PR00301 70kDa heat shock protein signature 212 222 8.0E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 PRINTS PR00301 70kDa heat shock protein signature 153 173 8.0E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 PRINTS PR00301 70kDa heat shock protein signature 463 479 8.0E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 PRINTS PR00301 70kDa heat shock protein signature 326 342 8.0E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 8.0E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 PRINTS PR00301 70kDa heat shock protein signature 382 401 8.0E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 PRINTS PR00301 70kDa heat shock protein signature 357 377 8.0E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 8.0E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 Gene3D G3DSA:3.30.420.40 195 358 2.7E-113 T 14-10-2018 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CF65_00713 7a2d6b3643970f4f44efe1a81cf8a547 616 Gene3D G3DSA:3.90.640.10 239 311 2.7E-113 T 14-10-2018 CF65_02228 946a0faa9022b15afc056db86e1d4ccf 317 Gene3D G3DSA:1.10.10.10 1 61 2.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02228 946a0faa9022b15afc056db86e1d4ccf 317 Pfam PF04198 Putative sugar-binding domain 65 314 2.6E-70 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CF65_02228 946a0faa9022b15afc056db86e1d4ccf 317 SUPERFAMILY SSF100950 68 313 8.37E-57 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_02228 946a0faa9022b15afc056db86e1d4ccf 317 Gene3D G3DSA:3.40.50.1360 67 314 4.6E-77 T 14-10-2018 CF65_01599 99a4ec0598867fc9a95ea74c9d651e81 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CF65_01599 99a4ec0598867fc9a95ea74c9d651e81 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.3E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like CF65_01599 99a4ec0598867fc9a95ea74c9d651e81 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.3E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like CF65_01599 99a4ec0598867fc9a95ea74c9d651e81 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.3E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like CF65_01599 99a4ec0598867fc9a95ea74c9d651e81 85 Gene3D G3DSA:3.30.1340.10 1 85 3.4E-32 T 14-10-2018 IPR035895 HPr-like superfamily CF65_01599 99a4ec0598867fc9a95ea74c9d651e81 85 Pfam PF00381 PTS HPr component phosphorylation site 3 81 7.3E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like CF65_01599 99a4ec0598867fc9a95ea74c9d651e81 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.9E-28 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like CF65_01599 99a4ec0598867fc9a95ea74c9d651e81 85 SUPERFAMILY SSF55594 1 81 2.75E-25 T 14-10-2018 IPR035895 HPr-like superfamily CF65_01599 99a4ec0598867fc9a95ea74c9d651e81 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CF65_02529 60390977fc7647005b985f6adde130e0 225 Pfam PF02224 Cytidylate kinase 5 219 5.8E-83 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CF65_02529 60390977fc7647005b985f6adde130e0 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 216 1.1E-94 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CF65_02529 60390977fc7647005b985f6adde130e0 225 SUPERFAMILY SSF52540 1 220 2.45E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02529 60390977fc7647005b985f6adde130e0 225 Hamap MF_00238 Cytidylate kinase [cmk]. 3 221 34.645 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CF65_02529 60390977fc7647005b985f6adde130e0 225 Gene3D G3DSA:3.40.50.300 1 225 3.3E-84 T 14-10-2018 CF65_02879 fc4753e3cc20381139742638254125a0 329 Gene3D G3DSA:1.10.600.10 1 328 9.3E-117 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily CF65_02879 fc4753e3cc20381139742638254125a0 329 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 87 101 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site CF65_02879 fc4753e3cc20381139742638254125a0 329 Pfam PF00348 Polyprenyl synthetase 38 269 5.1E-75 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 CF65_02879 fc4753e3cc20381139742638254125a0 329 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 209 221 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site CF65_02879 fc4753e3cc20381139742638254125a0 329 SUPERFAMILY SSF48576 10 329 7.84E-98 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily CF65_01194 8d4cb166245a3605998171731b49c1ec 83 Pfam PF00550 Phosphopantetheine attachment site 5 74 3.0E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain CF65_01194 8d4cb166245a3605998171731b49c1ec 83 SUPERFAMILY SSF47336 1 78 1.31E-17 T 14-10-2018 IPR036736 ACP-like superfamily CF65_01194 8d4cb166245a3605998171731b49c1ec 83 Gene3D G3DSA:1.10.1200.10 1 83 9.8E-18 T 14-10-2018 IPR036736 ACP-like superfamily CF65_01575 ad6b262f4b8696da32384819f4ce869a 468 Pfam PF04317 YcjX-like family, DUF463 21 468 2.6E-183 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CF65_01575 ad6b262f4b8696da32384819f4ce869a 468 PIRSF PIRSF019381 1 468 9.5E-202 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CF65_01575 ad6b262f4b8696da32384819f4ce869a 468 SUPERFAMILY SSF52540 13 137 4.91E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02958 5821530035cb1d18297c935e7a65ceab 344 PIRSF PIRSF004925 1 342 2.8E-88 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter CF65_02958 5821530035cb1d18297c935e7a65ceab 344 Pfam PF12832 MFS_1 like family 49 318 1.4E-36 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain CF65_02958 5821530035cb1d18297c935e7a65ceab 344 SUPERFAMILY SSF103473 2 332 1.44E-30 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_02958 5821530035cb1d18297c935e7a65ceab 344 Gene3D G3DSA:1.20.1250.20 154 343 2.2E-32 T 14-10-2018 CF65_02958 5821530035cb1d18297c935e7a65ceab 344 Gene3D G3DSA:1.20.1250.20 1 150 1.5E-9 T 14-10-2018 CF65_02736 62badea2f1d0d2e116ea8f2db8ad4069 384 SMART SM01118 2 202 3.4E-25 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CF65_02736 62badea2f1d0d2e116ea8f2db8ad4069 384 Gene3D G3DSA:2.40.320.10 2 200 4.4E-33 T 14-10-2018 CF65_02736 62badea2f1d0d2e116ea8f2db8ad4069 384 SUPERFAMILY SSF55154 1 202 1.49E-37 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 CF65_02736 62badea2f1d0d2e116ea8f2db8ad4069 384 Pfam PF01928 CYTH domain 4 196 1.1E-25 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CF65_01334 a5b84ead03a16ceb27052ddd85fb4319 287 Pfam PF09612 Bacterial protein of unknown function (HtrL_YibB) 8 271 3.9E-104 T 14-10-2018 IPR011735 HtrL protein CF65_02539 4dd755d713258eceeb70c7136b57e46a 310 Gene3D G3DSA:1.10.10.10 5 94 6.7E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02539 4dd755d713258eceeb70c7136b57e46a 310 Gene3D G3DSA:3.40.190.10 167 271 1.8E-76 T 14-10-2018 CF65_02539 4dd755d713258eceeb70c7136b57e46a 310 Pfam PF03466 LysR substrate binding domain 92 293 2.6E-37 T 14-10-2018 IPR005119 LysR, substrate-binding CF65_02539 4dd755d713258eceeb70c7136b57e46a 310 SUPERFAMILY SSF53850 93 294 8.22E-37 T 14-10-2018 CF65_02539 4dd755d713258eceeb70c7136b57e46a 310 SUPERFAMILY SSF46785 4 116 2.37E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_02539 4dd755d713258eceeb70c7136b57e46a 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_02539 4dd755d713258eceeb70c7136b57e46a 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_02539 4dd755d713258eceeb70c7136b57e46a 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_02539 4dd755d713258eceeb70c7136b57e46a 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_02539 4dd755d713258eceeb70c7136b57e46a 310 Gene3D G3DSA:3.40.190.10 95 294 1.8E-76 T 14-10-2018 CF65_00162 2389439f3a729938968511af128f47fe 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 1.2E-15 T 14-10-2018 IPR003004 GspF/PilC family CF65_00162 2389439f3a729938968511af128f47fe 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 1.2E-15 T 14-10-2018 IPR003004 GspF/PilC family CF65_00162 2389439f3a729938968511af128f47fe 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 1.2E-15 T 14-10-2018 IPR003004 GspF/PilC family CF65_00162 2389439f3a729938968511af128f47fe 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 1.2E-15 T 14-10-2018 IPR003004 GspF/PilC family CF65_00162 2389439f3a729938968511af128f47fe 407 Pfam PF00482 Type II secretion system (T2SS), protein F 267 398 8.4E-28 T 14-10-2018 IPR018076 Type II secretion system F domain CF65_00162 2389439f3a729938968511af128f47fe 407 Pfam PF00482 Type II secretion system (T2SS), protein F 64 186 3.7E-25 T 14-10-2018 IPR018076 Type II secretion system F domain CF65_00162 2389439f3a729938968511af128f47fe 407 Gene3D G3DSA:1.20.81.30 48 163 7.7E-22 T 14-10-2018 CF65_00162 2389439f3a729938968511af128f47fe 407 Gene3D G3DSA:1.20.81.30 255 378 9.9E-22 T 14-10-2018 CF65_00162 2389439f3a729938968511af128f47fe 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 158 186 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CF65_02360 40f9de125ba0d249a82361a56d102d26 424 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CF65_02360 40f9de125ba0d249a82361a56d102d26 424 Gene3D G3DSA:3.40.50.1100 83 392 7.7E-139 T 14-10-2018 CF65_02360 40f9de125ba0d249a82361a56d102d26 424 TIGRFAM TIGR00260 thrC: threonine synthase 50 396 1.3E-121 T 14-10-2018 IPR004450 Threonine synthase-like CF65_02360 40f9de125ba0d249a82361a56d102d26 424 Gene3D G3DSA:3.90.1380.10 1 79 3.5E-29 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily CF65_02360 40f9de125ba0d249a82361a56d102d26 424 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 89 366 6.4E-23 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CF65_02360 40f9de125ba0d249a82361a56d102d26 424 Pfam PF14821 Threonine synthase N terminus 10 78 5.2E-10 T 14-10-2018 IPR029144 Threonine synthase, N-terminal CF65_02360 40f9de125ba0d249a82361a56d102d26 424 SUPERFAMILY SSF53686 1 423 1.26E-130 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_02360 40f9de125ba0d249a82361a56d102d26 424 Gene3D G3DSA:3.40.50.1100 101 399 7.7E-139 T 14-10-2018 CF65_00087 4e1456fd0ec1db091fcbb9ac46200969 249 Gene3D G3DSA:3.40.50.1820 1 244 3.9E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_00087 4e1456fd0ec1db091fcbb9ac46200969 249 Pfam PF00561 alpha/beta hydrolase fold 4 230 2.1E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CF65_00087 4e1456fd0ec1db091fcbb9ac46200969 249 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 2 243 1.0E-91 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CF65_00087 4e1456fd0ec1db091fcbb9ac46200969 249 SUPERFAMILY SSF53474 2 243 1.35E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_00087 4e1456fd0ec1db091fcbb9ac46200969 249 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 1 243 34.178 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CF65_02172 9c21e17816f7d296b25a9c3cbe6bdddc 184 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 12 164 2.8E-45 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CF65_02172 9c21e17816f7d296b25a9c3cbe6bdddc 184 Gene3D G3DSA:3.40.50.1000 5 184 2.5E-58 T 14-10-2018 IPR023214 HAD superfamily CF65_02172 9c21e17816f7d296b25a9c3cbe6bdddc 184 SUPERFAMILY SSF56784 8 168 3.28E-42 T 14-10-2018 IPR036412 HAD-like superfamily CF65_02172 9c21e17816f7d296b25a9c3cbe6bdddc 184 PIRSF PIRSF006118 1 176 3.3E-69 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CF65_02172 9c21e17816f7d296b25a9c3cbe6bdddc 184 Pfam PF08282 haloacid dehalogenase-like hydrolase 86 143 1.4E-8 T 14-10-2018 CF65_02172 9c21e17816f7d296b25a9c3cbe6bdddc 184 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 13 127 2.6E-17 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CF65_02241 a94b4f7d29e0a9798afe848a2e410b5b 173 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 17 165 1.0E-71 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_02241 a94b4f7d29e0a9798afe848a2e410b5b 173 Gene3D G3DSA:3.30.70.640 14 173 1.5E-68 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_02241 a94b4f7d29e0a9798afe848a2e410b5b 173 Pfam PF01967 MoaC family 28 163 6.7E-55 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_02241 a94b4f7d29e0a9798afe848a2e410b5b 173 SUPERFAMILY SSF55040 24 168 3.01E-61 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_02241 a94b4f7d29e0a9798afe848a2e410b5b 173 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 15 171 35.442 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 Pfam PF01546 Peptidase family M20/M25/M40 72 477 2.3E-16 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 PRINTS PR00934 X-His dipeptidase (M25) signature 253 272 1.1E-90 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 PRINTS PR00934 X-His dipeptidase (M25) signature 364 382 1.1E-90 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.1E-90 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.1E-90 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 PRINTS PR00934 X-His dipeptidase (M25) signature 205 222 1.1E-90 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.1E-90 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 PRINTS PR00934 X-His dipeptidase (M25) signature 429 445 1.1E-90 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 PRINTS PR00934 X-His dipeptidase (M25) signature 451 473 1.1E-90 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.1E-90 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 SUPERFAMILY SSF53187 12 482 2.27E-58 T 14-10-2018 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 Pfam PF07687 Peptidase dimerisation domain 207 270 4.6E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain CF65_00914 109197dbec2f84486ce9468293fa3b35 486 Gene3D G3DSA:3.40.630.10 1 240 7.8E-60 T 14-10-2018 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 Gene3D G3DSA:3.40.630.10 348 485 1.7E-23 T 14-10-2018 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 483 5.4E-185 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CF65_00914 109197dbec2f84486ce9468293fa3b35 486 PIRSF PIRSF016599 1 486 1.2E-199 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CF65_01928 ccc6de8b9bb6bd712ca42bdc848f4815 874 SMART SM00490 393 473 1.9E-18 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_01928 ccc6de8b9bb6bd712ca42bdc848f4815 874 Gene3D G3DSA:3.40.50.300 288 506 2.2E-38 T 14-10-2018 CF65_01928 ccc6de8b9bb6bd712ca42bdc848f4815 874 Pfam PF00271 Helicase conserved C-terminal domain 366 473 2.7E-17 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_01928 ccc6de8b9bb6bd712ca42bdc848f4815 874 SUPERFAMILY SSF52540 8 188 2.66E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01928 ccc6de8b9bb6bd712ca42bdc848f4815 874 Gene3D G3DSA:3.40.50.10810 1 242 1.2E-36 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily CF65_01928 ccc6de8b9bb6bd712ca42bdc848f4815 874 Pfam PF00176 SNF2 family N-terminal domain 13 233 3.2E-28 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CF65_01928 ccc6de8b9bb6bd712ca42bdc848f4815 874 SUPERFAMILY SSF52540 87 518 4.46E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01451 b8632242ee724b5f3637ea9472afe193 490 TIGRFAM TIGR01312 XylB: xylulokinase 3 484 2.0E-187 T 14-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 CF65_01451 b8632242ee724b5f3637ea9472afe193 490 SUPERFAMILY SSF53067 251 487 1.08E-51 T 14-10-2018 CF65_01451 b8632242ee724b5f3637ea9472afe193 490 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 353 374 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CF65_01451 b8632242ee724b5f3637ea9472afe193 490 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 249 2.1E-81 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CF65_01451 b8632242ee724b5f3637ea9472afe193 490 Gene3D G3DSA:3.30.420.40 252 486 4.3E-65 T 14-10-2018 CF65_01451 b8632242ee724b5f3637ea9472afe193 490 PIRSF PIRSF000538 1 490 2.0E-123 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CF65_01451 b8632242ee724b5f3637ea9472afe193 490 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 441 1.1E-26 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CF65_01451 b8632242ee724b5f3637ea9472afe193 490 Gene3D G3DSA:3.30.420.40 1 250 1.4E-76 T 14-10-2018 CF65_01451 b8632242ee724b5f3637ea9472afe193 490 SUPERFAMILY SSF53067 2 251 8.35E-67 T 14-10-2018 CF65_02989 82a9bee73009a0f7eca34af0c89cd309 117 Pfam PF07233 Protein of unknown function (DUF1425) 33 115 6.3E-13 T 14-10-2018 IPR010824 Protein of unknown function DUF1425 CF65_02989 82a9bee73009a0f7eca34af0c89cd309 117 Gene3D G3DSA:2.60.40.3230 25 116 9.2E-20 T 14-10-2018 IPR038483 YcfL-like superfamily CF65_00286 041977625ea712fee1103dc2d83ef7d2 72 SUPERFAMILY SSF53633 10 69 3.81E-5 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CF65_00286 041977625ea712fee1103dc2d83ef7d2 72 Gene3D G3DSA:3.40.1160.10 6 71 1.9E-12 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CF65_02524 4c6461b9a8e8e3ede9c84cda94332ac3 230 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 225 5.5E-60 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CF65_02524 4c6461b9a8e8e3ede9c84cda94332ac3 230 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 224 1.9E-48 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CF65_02524 4c6461b9a8e8e3ede9c84cda94332ac3 230 Gene3D G3DSA:3.20.20.70 2 229 1.3E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02524 4c6461b9a8e8e3ede9c84cda94332ac3 230 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CF65_02524 4c6461b9a8e8e3ede9c84cda94332ac3 230 SMART SM00934 4 225 8.0E-94 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CF65_02524 4c6461b9a8e8e3ede9c84cda94332ac3 230 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 230 40.436 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CF65_02524 4c6461b9a8e8e3ede9c84cda94332ac3 230 SUPERFAMILY SSF51366 2 228 2.61E-78 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 198 207 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 Pfam PF04408 Helicase associated domain (HA2) 470 608 1.1E-13 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 Gene3D G3DSA:1.20.120.1080 530 603 3.2E-13 T 14-10-2018 CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 Pfam PF00270 DEAD/DEAH box helicase 92 239 2.2E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 Pfam PF11898 Domain of unknown function (DUF3418) 764 1346 7.9E-228 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 Gene3D G3DSA:1.10.10.2130 429 473 1.7E-10 T 14-10-2018 CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 19 479 1.8E-255 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 534 1346 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 SUPERFAMILY SSF52540 80 651 5.14E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 Gene3D G3DSA:3.40.50.300 259 425 1.5E-56 T 14-10-2018 CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 SMART SM00847 467 610 2.0E-30 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 SMART SM00487 40 265 8.2E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 SMART SM00490 307 407 5.4E-15 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 SMART SM00382 98 387 5.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 673 749 3.5E-21 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 Pfam PF00271 Helicase conserved C-terminal domain 288 406 1.2E-12 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_02454 252b1e6d6610c03d3c14b94a936c93ff 1349 Gene3D G3DSA:3.40.50.300 34 258 2.8E-77 T 14-10-2018 CF65_02111 052e7e5287b49ec6ff9732deadcda304 246 Gene3D G3DSA:1.10.10.2250 1 81 8.1E-37 T 14-10-2018 CF65_02111 052e7e5287b49ec6ff9732deadcda304 246 Pfam PF04288 MukE-like family 10 235 6.1E-120 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CF65_02111 052e7e5287b49ec6ff9732deadcda304 246 Gene3D G3DSA:1.10.10.2260 87 195 1.9E-45 T 14-10-2018 CF65_02111 052e7e5287b49ec6ff9732deadcda304 246 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 9 243 49.999 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CF65_02598 b17b397bd2e5dd17659c01594528baa2 558 Pfam PF00501 AMP-binding enzyme 29 462 6.6E-107 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CF65_02598 b17b397bd2e5dd17659c01594528baa2 558 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site CF65_02598 b17b397bd2e5dd17659c01594528baa2 558 SUPERFAMILY SSF56801 21 555 7.72E-146 T 14-10-2018 CF65_02598 b17b397bd2e5dd17659c01594528baa2 558 Gene3D G3DSA:3.40.50.12780 16 455 6.5E-111 T 14-10-2018 CF65_02598 b17b397bd2e5dd17659c01594528baa2 558 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 545 7.4E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CF65_02598 b17b397bd2e5dd17659c01594528baa2 558 Gene3D G3DSA:3.30.300.310 458 557 2.4E-30 T 14-10-2018 CF65_00391 a97dfa339ec72173478a52ecad43a462 116 SUPERFAMILY SSF52833 2 116 5.37E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_00391 a97dfa339ec72173478a52ecad43a462 116 Gene3D G3DSA:3.40.30.10 1 116 5.8E-42 T 14-10-2018 CF65_00391 a97dfa339ec72173478a52ecad43a462 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 1.7E-45 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CF65_00391 a97dfa339ec72173478a52ecad43a462 116 Pfam PF03960 ArsC family 6 115 1.7E-20 T 14-10-2018 IPR006660 Arsenate reductase-like CF65_00277 bd17e23a6cadb073ec672a6d3d2233e7 246 Gene3D G3DSA:3.40.50.150 19 244 7.0E-22 T 14-10-2018 CF65_00277 bd17e23a6cadb073ec672a6d3d2233e7 246 SUPERFAMILY SSF53335 16 243 1.64E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00277 bd17e23a6cadb073ec672a6d3d2233e7 246 Pfam PF13489 Methyltransferase domain 23 154 5.6E-10 T 14-10-2018 CF65_00277 bd17e23a6cadb073ec672a6d3d2233e7 246 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 4 242 7.5E-64 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 CF65_02027 2e82d8db457585cccec63fa2e94fb678 300 Gene3D G3DSA:3.30.1450.10 81 156 1.9E-6 T 14-10-2018 IPR037873 BamE-like CF65_02027 2e82d8db457585cccec63fa2e94fb678 300 Gene3D G3DSA:3.30.1330.60 158 280 2.1E-35 T 14-10-2018 IPR036737 OmpA-like domain superfamily CF65_02027 2e82d8db457585cccec63fa2e94fb678 300 Pfam PF00691 OmpA family 170 256 2.1E-18 T 14-10-2018 IPR006665 OmpA-like domain CF65_02027 2e82d8db457585cccec63fa2e94fb678 300 PRINTS PR01021 OMPA domain signature 201 216 3.3E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CF65_02027 2e82d8db457585cccec63fa2e94fb678 300 PRINTS PR01021 OMPA domain signature 171 193 3.3E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CF65_02027 2e82d8db457585cccec63fa2e94fb678 300 PRINTS PR01021 OMPA domain signature 216 232 3.3E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CF65_02027 2e82d8db457585cccec63fa2e94fb678 300 SUPERFAMILY SSF103088 162 275 3.66E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily CF65_02027 2e82d8db457585cccec63fa2e94fb678 300 Pfam PF04355 SmpA / OmlA family 81 149 3.4E-17 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CF65_02925 c19dd1018782756e9ca27b5ed3ee40aa 193 Pfam PF03458 UPF0126 domain 1 53 5.3E-13 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 CF65_02925 c19dd1018782756e9ca27b5ed3ee40aa 193 Pfam PF03458 UPF0126 domain 69 142 2.6E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 CF65_02114 cb0b6b906a3a89f0cb2dc08c3d7e67dc 478 SMART SM00479 11 204 0.0084 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_02114 cb0b6b906a3a89f0cb2dc08c3d7e67dc 478 SUPERFAMILY SSF53098 11 476 1.38E-130 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_02114 cb0b6b906a3a89f0cb2dc08c3d7e67dc 478 Gene3D G3DSA:3.30.420.10 5 202 5.1E-71 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CF65_02114 cb0b6b906a3a89f0cb2dc08c3d7e67dc 478 Gene3D G3DSA:2.30.30.450 215 356 3.4E-52 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily CF65_02114 cb0b6b906a3a89f0cb2dc08c3d7e67dc 478 Pfam PF08411 Exonuclease C-terminal 213 474 1.7E-102 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 CF65_02114 cb0b6b906a3a89f0cb2dc08c3d7e67dc 478 Pfam PF00929 Exonuclease 14 193 1.2E-28 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_02114 cb0b6b906a3a89f0cb2dc08c3d7e67dc 478 PIRSF PIRSF000977 4 478 3.4E-199 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 CF65_02114 cb0b6b906a3a89f0cb2dc08c3d7e67dc 478 Gene3D G3DSA:1.20.1280.70 362 423 2.5E-25 T 14-10-2018 CF65_00216 387454176675d4926b402c689af497dd 262 Gene3D G3DSA:3.90.550.20 83 252 6.6E-14 T 14-10-2018 CF65_00216 387454176675d4926b402c689af497dd 262 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 78 157 1.3E-13 T 14-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif CF65_00216 387454176675d4926b402c689af497dd 262 SUPERFAMILY SSF53448 76 220 1.87E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02944 961671ac3da758b8a6503d88a31fbfc9 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 8.0E-23 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02944 961671ac3da758b8a6503d88a31fbfc9 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 1.5E-34 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02944 961671ac3da758b8a6503d88a31fbfc9 87 SUPERFAMILY SSF46992 3 86 1.57E-30 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02944 961671ac3da758b8a6503d88a31fbfc9 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.595 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02944 961671ac3da758b8a6503d88a31fbfc9 87 Pfam PF01649 Ribosomal protein S20 2 84 9.4E-27 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02944 961671ac3da758b8a6503d88a31fbfc9 87 Gene3D G3DSA:1.20.58.110 1 87 3.9E-29 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00187 3c990aeec2b658e0756d7093524c9c28 109 Gene3D G3DSA:3.30.460.10 1 108 3.8E-20 T 14-10-2018 CF65_00187 3c990aeec2b658e0756d7093524c9c28 109 Pfam PF01909 Nucleotidyltransferase domain 13 83 1.1E-6 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CF65_00187 3c990aeec2b658e0756d7093524c9c28 109 SUPERFAMILY SSF81301 11 94 2.39E-14 T 14-10-2018 CF65_01810 4c1cfe2d8edecab356259d0dcd22a0a7 359 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 2 358 26.37 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 CF65_01810 4c1cfe2d8edecab356259d0dcd22a0a7 359 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 7 357 3.8E-129 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 CF65_01810 4c1cfe2d8edecab356259d0dcd22a0a7 359 Pfam PF03116 NQR2, RnfD, RnfE family 5 355 1.8E-97 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 CF65_00884 4b355da1e935a2f57d22702ca9b031d3 500 Pfam PF00209 Sodium:neurotransmitter symporter family 8 124 3.7E-43 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_00884 4b355da1e935a2f57d22702ca9b031d3 500 Pfam PF00209 Sodium:neurotransmitter symporter family 126 487 9.2E-84 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_00884 4b355da1e935a2f57d22702ca9b031d3 500 SUPERFAMILY SSF161070 8 489 1.96E-131 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 CF65_00884 4b355da1e935a2f57d22702ca9b031d3 500 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 32 46 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_00884 4b355da1e935a2f57d22702ca9b031d3 500 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 89 115 8.2E-27 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_00884 4b355da1e935a2f57d22702ca9b031d3 500 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 16 37 8.2E-27 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_00884 4b355da1e935a2f57d22702ca9b031d3 500 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 315 334 8.2E-27 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_00884 4b355da1e935a2f57d22702ca9b031d3 500 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 45 64 8.2E-27 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CF65_00410 ce20faba87e662808dc903adadcd6d14 170 Pfam PF01327 Polypeptide deformylase 5 152 2.6E-50 T 14-10-2018 IPR023635 Peptide deformylase CF65_00410 ce20faba87e662808dc903adadcd6d14 170 SUPERFAMILY SSF56420 4 165 4.19E-61 T 14-10-2018 IPR036821 Peptide deformylase superfamily CF65_00410 ce20faba87e662808dc903adadcd6d14 170 PRINTS PR01576 Peptide deformylase signature 101 119 3.7E-40 T 14-10-2018 IPR023635 Peptide deformylase CF65_00410 ce20faba87e662808dc903adadcd6d14 170 PRINTS PR01576 Peptide deformylase signature 89 100 3.7E-40 T 14-10-2018 IPR023635 Peptide deformylase CF65_00410 ce20faba87e662808dc903adadcd6d14 170 PRINTS PR01576 Peptide deformylase signature 33 62 3.7E-40 T 14-10-2018 IPR023635 Peptide deformylase CF65_00410 ce20faba87e662808dc903adadcd6d14 170 PRINTS PR01576 Peptide deformylase signature 120 149 3.7E-40 T 14-10-2018 IPR023635 Peptide deformylase CF65_00410 ce20faba87e662808dc903adadcd6d14 170 PIRSF PIRSF004749 1 170 6.1E-58 T 14-10-2018 IPR023635 Peptide deformylase CF65_00410 ce20faba87e662808dc903adadcd6d14 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.427 T 14-10-2018 IPR023635 Peptide deformylase CF65_00410 ce20faba87e662808dc903adadcd6d14 170 Gene3D G3DSA:3.90.45.10 1 169 3.0E-68 T 14-10-2018 IPR036821 Peptide deformylase superfamily CF65_00410 ce20faba87e662808dc903adadcd6d14 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 3.5E-65 T 14-10-2018 IPR023635 Peptide deformylase CF65_00669 113c16b3d34bbc49035bf11d0647dd88 222 PIRSF PIRSF036516 1 222 1.4E-96 T 14-10-2018 IPR015957 Cytolethal distending toxin A CF65_00669 113c16b3d34bbc49035bf11d0647dd88 222 SUPERFAMILY SSF50370 68 221 1.72E-47 T 14-10-2018 IPR035992 Ricin B-like lectins CF65_00669 113c16b3d34bbc49035bf11d0647dd88 222 PRINTS PR01387 Cytolethal distending toxin A signature 165 179 7.6E-40 T 14-10-2018 IPR015957 Cytolethal distending toxin A CF65_00669 113c16b3d34bbc49035bf11d0647dd88 222 PRINTS PR01387 Cytolethal distending toxin A signature 84 101 7.6E-40 T 14-10-2018 IPR015957 Cytolethal distending toxin A CF65_00669 113c16b3d34bbc49035bf11d0647dd88 222 PRINTS PR01387 Cytolethal distending toxin A signature 47 60 7.6E-40 T 14-10-2018 IPR015957 Cytolethal distending toxin A CF65_00669 113c16b3d34bbc49035bf11d0647dd88 222 PRINTS PR01387 Cytolethal distending toxin A signature 106 120 7.6E-40 T 14-10-2018 IPR015957 Cytolethal distending toxin A CF65_00669 113c16b3d34bbc49035bf11d0647dd88 222 PRINTS PR01387 Cytolethal distending toxin A signature 128 140 7.6E-40 T 14-10-2018 IPR015957 Cytolethal distending toxin A CF65_00669 113c16b3d34bbc49035bf11d0647dd88 222 PRINTS PR01387 Cytolethal distending toxin A signature 188 202 7.6E-40 T 14-10-2018 IPR015957 Cytolethal distending toxin A CF65_00669 113c16b3d34bbc49035bf11d0647dd88 222 Gene3D G3DSA:2.80.10.50 57 222 9.2E-57 T 14-10-2018 CF65_00669 113c16b3d34bbc49035bf11d0647dd88 222 Pfam PF03498 Cytolethal distending toxin A/C domain 76 219 2.3E-47 T 14-10-2018 IPR003558 Cytolethal distending toxin A/C GO:0009405 CF65_02850 be2fb2daa1c97a597d8bb2334861b6c0 148 Gene3D G3DSA:3.90.79.10 3 148 3.3E-42 T 14-10-2018 CF65_02850 be2fb2daa1c97a597d8bb2334861b6c0 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 23 44 4.2E-39 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CF65_02850 be2fb2daa1c97a597d8bb2334861b6c0 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 129 142 4.2E-39 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CF65_02850 be2fb2daa1c97a597d8bb2334861b6c0 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 74 93 4.2E-39 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CF65_02850 be2fb2daa1c97a597d8bb2334861b6c0 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 6 23 4.2E-39 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CF65_02850 be2fb2daa1c97a597d8bb2334861b6c0 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 102 123 4.2E-39 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CF65_02850 be2fb2daa1c97a597d8bb2334861b6c0 148 SUPERFAMILY SSF55811 11 146 4.74E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CF65_02850 be2fb2daa1c97a597d8bb2334861b6c0 148 Pfam PF00293 NUDIX domain 10 142 1.8E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CF65_02850 be2fb2daa1c97a597d8bb2334861b6c0 148 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CF65_01950 71053b0dea9ff3e5bf3182193e069901 283 SUPERFAMILY SSF161098 12 275 1.5E-55 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01950 71053b0dea9ff3e5bf3182193e069901 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 269 2.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01950 71053b0dea9ff3e5bf3182193e069901 283 Gene3D G3DSA:1.10.3720.10 6 269 5.5E-47 T 14-10-2018 IPR035906 MetI-like superfamily CF65_00858 5bc3bbb0ab09181570fec3a6cbaa4ca9 244 Pfam PF00005 ABC transporter 20 170 4.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_00858 5bc3bbb0ab09181570fec3a6cbaa4ca9 244 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_00858 5bc3bbb0ab09181570fec3a6cbaa4ca9 244 Gene3D G3DSA:3.40.50.300 1 243 7.0E-70 T 14-10-2018 CF65_00858 5bc3bbb0ab09181570fec3a6cbaa4ca9 244 SMART SM00382 27 218 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00858 5bc3bbb0ab09181570fec3a6cbaa4ca9 244 SUPERFAMILY SSF52540 3 232 8.23E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00858 5bc3bbb0ab09181570fec3a6cbaa4ca9 244 PIRSF PIRSF039085 1 244 1.6E-86 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CF65_00545 9a77c17029208170b056f57cb657743c 243 Gene3D G3DSA:3.30.1490.330 110 191 1.4E-27 T 14-10-2018 CF65_00545 9a77c17029208170b056f57cb657743c 243 SUPERFAMILY SSF56059 36 230 7.06E-34 T 14-10-2018 CF65_00545 9a77c17029208170b056f57cb657743c 243 SUPERFAMILY SSF52440 1 126 9.21E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CF65_00545 9a77c17029208170b056f57cb657743c 243 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 4 230 2.2E-39 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CF65_01127 47fbd0b7ad587d07fa118a8409df904b 252 PRINTS PR01374 Gram-negative bacterial tonB protein signature 192 210 9.9E-10 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CF65_01127 47fbd0b7ad587d07fa118a8409df904b 252 PRINTS PR01374 Gram-negative bacterial tonB protein signature 97 107 9.9E-10 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CF65_01127 47fbd0b7ad587d07fa118a8409df904b 252 PRINTS PR01374 Gram-negative bacterial tonB protein signature 171 192 9.9E-10 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CF65_01127 47fbd0b7ad587d07fa118a8409df904b 252 Gene3D G3DSA:3.30.1150.10 54 252 1.1E-24 T 14-10-2018 CF65_01127 47fbd0b7ad587d07fa118a8409df904b 252 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 176 251 3.1E-19 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 CF65_01127 47fbd0b7ad587d07fa118a8409df904b 252 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 177 252 9.4E-22 T 14-10-2018 IPR006260 TonB/TolA, C-terminal CF65_01127 47fbd0b7ad587d07fa118a8409df904b 252 SUPERFAMILY SSF74653 152 252 6.28E-22 T 14-10-2018 CF65_02757 a6a0bad3b25c1f1f8a1604f331d7b001 365 Gene3D G3DSA:3.90.1150.10 24 357 8.5E-115 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_02757 a6a0bad3b25c1f1f8a1604f331d7b001 365 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 223 232 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 CF65_02757 a6a0bad3b25c1f1f8a1604f331d7b001 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 363 59.959 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CF65_02757 a6a0bad3b25c1f1f8a1604f331d7b001 365 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 362 4.9E-113 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CF65_02757 a6a0bad3b25c1f1f8a1604f331d7b001 365 Gene3D G3DSA:3.40.640.10 47 271 8.5E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_02757 a6a0bad3b25c1f1f8a1604f331d7b001 365 Pfam PF00155 Aminotransferase class I and II 34 352 3.2E-55 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CF65_02757 a6a0bad3b25c1f1f8a1604f331d7b001 365 SUPERFAMILY SSF53383 15 363 1.65E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_01539 75c669eccbffc5992d3743091c7af707 456 Gene3D G3DSA:2.160.10.10 228 456 4.1E-70 T 14-10-2018 CF65_01539 75c669eccbffc5992d3743091c7af707 456 SUPERFAMILY SSF53448 6 252 6.99E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01539 75c669eccbffc5992d3743091c7af707 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 7 455 3.4E-201 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 CF65_01539 75c669eccbffc5992d3743091c7af707 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 300 1.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_01539 75c669eccbffc5992d3743091c7af707 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 353 383 9.9E-4 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_01539 75c669eccbffc5992d3743091c7af707 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 352 3.3E-4 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_01539 75c669eccbffc5992d3743091c7af707 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 428 6.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_01539 75c669eccbffc5992d3743091c7af707 456 Pfam PF12804 MobA-like NTP transferase domain 8 129 4.2E-23 T 14-10-2018 IPR025877 MobA-like NTP transferase CF65_01539 75c669eccbffc5992d3743091c7af707 456 Gene3D G3DSA:3.90.550.10 2 227 4.0E-70 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01539 75c669eccbffc5992d3743091c7af707 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 42.066 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 CF65_01539 75c669eccbffc5992d3743091c7af707 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CF65_01539 75c669eccbffc5992d3743091c7af707 456 SUPERFAMILY SSF51161 255 437 5.14E-52 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily CF65_01315 3272b62b23f969cb2e8a4a394220541f 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 393 4.6E-161 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 CF65_01315 3272b62b23f969cb2e8a4a394220541f 399 SUPERFAMILY SSF52507 4 181 1.05E-59 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CF65_01315 3272b62b23f969cb2e8a4a394220541f 399 Gene3D G3DSA:3.40.50.1950 1 186 6.1E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CF65_01315 3272b62b23f969cb2e8a4a394220541f 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 368 8.4E-71 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CF65_01315 3272b62b23f969cb2e8a4a394220541f 399 Gene3D G3DSA:3.40.50.10300 187 399 1.9E-80 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CF65_01315 3272b62b23f969cb2e8a4a394220541f 399 Pfam PF02441 Flavoprotein 7 180 5.4E-44 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CF65_01315 3272b62b23f969cb2e8a4a394220541f 399 SUPERFAMILY SSF102645 185 397 1.83E-76 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CF65_02819 0164ccb15481993b14f801b3caf8b84f 149 Gene3D G3DSA:3.40.50.10220 43 147 1.1E-18 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_02819 0164ccb15481993b14f801b3caf8b84f 149 SUPERFAMILY SSF102220 38 144 2.62E-22 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_02819 0164ccb15481993b14f801b3caf8b84f 149 PIRSF PIRSF029225 12 147 1.5E-37 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_02819 0164ccb15481993b14f801b3caf8b84f 149 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 44 142 2.0E-6 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_02819 0164ccb15481993b14f801b3caf8b84f 149 Pfam PF03603 DNA polymerase III psi subunit 13 144 4.8E-37 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 Gene3D G3DSA:3.30.420.350 485 740 1.3E-117 T 14-10-2018 CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 SUPERFAMILY SSF55821 176 387 5.19E-48 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 6 752 8.9E-255 T 14-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 Pfam PF01300 Telomere recombination 211 382 5.1E-51 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 Gene3D G3DSA:3.30.110.120 254 369 7.4E-145 T 14-10-2018 CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 Pfam PF00708 Acylphosphatase 5 91 6.2E-18 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 Pfam PF07503 HypF finger 159 192 1.5E-17 T 14-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 Pfam PF07503 HypF finger 109 142 4.9E-16 T 14-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 SUPERFAMILY SSF54975 3 92 9.59E-20 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 Gene3D G3DSA:3.90.870.50 6 360 7.4E-145 T 14-10-2018 CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 PIRSF PIRSF006256 1 761 2.2E-273 T 14-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CF65_02682 ef96177773bfc8ee12fc4d65c3fba9b0 761 Gene3D G3DSA:3.30.420.360 381 752 1.3E-117 T 14-10-2018 CF65_01530 d771e050823aea799ab6df613b18fbb4 454 SUPERFAMILY SSF52151 58 379 1.46E-31 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CF65_01530 d771e050823aea799ab6df613b18fbb4 454 Pfam PF01734 Patatin-like phospholipase 62 302 2.6E-20 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CF65_02000 a3d0cb3a7983ae061fb0709789a90da6 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 2.3E-24 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CF65_02000 a3d0cb3a7983ae061fb0709789a90da6 275 Gene3D G3DSA:2.160.10.10 87 257 7.3E-61 T 14-10-2018 CF65_02000 a3d0cb3a7983ae061fb0709789a90da6 275 SUPERFAMILY SSF51161 2 256 2.36E-80 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily CF65_02000 a3d0cb3a7983ae061fb0709789a90da6 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 56.869 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CF65_02000 a3d0cb3a7983ae061fb0709789a90da6 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 4.4E-150 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CF65_02000 a3d0cb3a7983ae061fb0709789a90da6 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 6.0E-14 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_02000 a3d0cb3a7983ae061fb0709789a90da6 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 166 3.1E-5 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_02000 a3d0cb3a7983ae061fb0709789a90da6 275 Gene3D G3DSA:1.10.166.10 1 70 1.4E-30 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 CF65_02000 a3d0cb3a7983ae061fb0709789a90da6 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CF65_01390 c946c1797265f636791fb6cf2d8e52c5 207 Hamap MF_00015 LexA repressor [lexA]. 3 204 32.668 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CF65_01390 c946c1797265f636791fb6cf2d8e52c5 207 SUPERFAMILY SSF51306 79 203 5.93E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CF65_01390 c946c1797265f636791fb6cf2d8e52c5 207 Gene3D G3DSA:2.10.109.10 84 207 4.5E-44 T 14-10-2018 CF65_01390 c946c1797265f636791fb6cf2d8e52c5 207 SUPERFAMILY SSF46785 3 69 2.57E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_01390 c946c1797265f636791fb6cf2d8e52c5 207 Pfam PF01726 LexA DNA binding domain 1 65 3.1E-29 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CF65_01390 c946c1797265f636791fb6cf2d8e52c5 207 Pfam PF00717 Peptidase S24-like 118 183 2.6E-14 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_01390 c946c1797265f636791fb6cf2d8e52c5 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 5.6E-85 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CF65_01390 c946c1797265f636791fb6cf2d8e52c5 207 Gene3D G3DSA:1.10.10.10 1 69 5.3E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01390 c946c1797265f636791fb6cf2d8e52c5 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 3.9E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CF65_01390 c946c1797265f636791fb6cf2d8e52c5 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 3.9E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CF65_01390 c946c1797265f636791fb6cf2d8e52c5 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 3.9E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CF65_00600 eb968018e9431fe29fe22a594d9f399c 185 Pfam PF01765 Ribosome recycling factor 21 183 1.4E-63 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CF65_00600 eb968018e9431fe29fe22a594d9f399c 185 Gene3D G3DSA:3.30.1360.40 31 105 1.9E-68 T 14-10-2018 CF65_00600 eb968018e9431fe29fe22a594d9f399c 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 7.3E-79 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CF65_00600 eb968018e9431fe29fe22a594d9f399c 185 SUPERFAMILY SSF55194 3 183 1.22E-70 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 CF65_00600 eb968018e9431fe29fe22a594d9f399c 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.422 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CF65_00600 eb968018e9431fe29fe22a594d9f399c 185 Gene3D G3DSA:1.10.132.20 12 182 1.9E-68 T 14-10-2018 CF65_01886 e40ec529ff580dea2bda32144629f23a 338 Gene3D G3DSA:3.90.25.10 194 329 1.5E-138 T 14-10-2018 CF65_01886 e40ec529ff580dea2bda32144629f23a 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 262 2.8E-58 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CF65_01886 e40ec529ff580dea2bda32144629f23a 338 Gene3D G3DSA:3.40.50.720 3 274 1.5E-138 T 14-10-2018 CF65_01886 e40ec529ff580dea2bda32144629f23a 338 SUPERFAMILY SSF51735 1 337 6.12E-97 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01886 e40ec529ff580dea2bda32144629f23a 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 1.2E-137 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CF65_01750 019cf7f8a678ffa6adfa6d1a23d50de8 230 SUPERFAMILY SSF53167 1 228 7.99E-72 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CF65_01750 019cf7f8a678ffa6adfa6d1a23d50de8 230 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 44.117 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CF65_01750 019cf7f8a678ffa6adfa6d1a23d50de8 230 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 226 8.1E-84 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CF65_01750 019cf7f8a678ffa6adfa6d1a23d50de8 230 Gene3D G3DSA:3.40.50.1580 1 230 6.0E-68 T 14-10-2018 CF65_01750 019cf7f8a678ffa6adfa6d1a23d50de8 230 Pfam PF01048 Phosphorylase superfamily 2 227 1.5E-48 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CF65_01310 daab7e6bd93d3b5df114ad14bfc00e73 72 PIRSF PIRSF006169 1 72 3.3E-33 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 CF65_01310 daab7e6bd93d3b5df114ad14bfc00e73 72 Gene3D G3DSA:1.10.10.610 1 72 4.3E-21 T 14-10-2018 IPR036685 YehU-like superfamily CF65_01310 daab7e6bd93d3b5df114ad14bfc00e73 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 61 8.0E-20 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 CF65_01310 daab7e6bd93d3b5df114ad14bfc00e73 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 2 68 6.3E-28 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 CF65_01310 daab7e6bd93d3b5df114ad14bfc00e73 72 SUPERFAMILY SSF118001 1 70 7.72E-23 T 14-10-2018 IPR036685 YehU-like superfamily CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 228 241 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 370 7.6E-25 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 Gene3D G3DSA:3.20.20.10 34 276 4.2E-150 T 14-10-2018 IPR029066 PLP-binding barrel CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 Gene3D G3DSA:2.40.37.10 14 409 4.2E-150 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 8.1E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 8.1E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 8.1E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 8.1E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 271 290 8.1E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 413 42.19 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 SUPERFAMILY SSF51419 26 283 1.55E-81 T 14-10-2018 IPR029066 PLP-binding barrel CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 SUPERFAMILY SSF50621 259 414 4.4E-52 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 2.4E-32 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 2.4E-32 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 299 317 2.4E-32 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 2.4E-32 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 412 6.6E-171 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CF65_00923 2bbe29ff12b5db4733c9af132f034989 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 281 1.8E-77 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CF65_00079 88f2aaecfbfc2c9de6d645e2339cab71 179 Gene3D G3DSA:1.20.1550.10 1 178 8.5E-60 T 14-10-2018 IPR023380 DsbB-like superfamily CF65_00079 88f2aaecfbfc2c9de6d645e2339cab71 179 SUPERFAMILY SSF158442 15 162 3.14E-46 T 14-10-2018 IPR023380 DsbB-like superfamily CF65_00079 88f2aaecfbfc2c9de6d645e2339cab71 179 Pfam PF02600 Disulfide bond formation protein DsbB 12 160 2.9E-47 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CF65_00079 88f2aaecfbfc2c9de6d645e2339cab71 179 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 168 23.126 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB CF65_01221 fb226ae97ea32e063902f3e1c45eb22f 194 SUPERFAMILY SSF89360 3 99 4.51E-23 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CF65_01221 fb226ae97ea32e063902f3e1c45eb22f 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 120 183 8.0E-24 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CF65_01221 fb226ae97ea32e063902f3e1c45eb22f 194 SUPERFAMILY SSF117916 97 177 4.14E-23 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily CF65_01221 fb226ae97ea32e063902f3e1c45eb22f 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 45.046 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CF65_01221 fb226ae97ea32e063902f3e1c45eb22f 194 Gene3D G3DSA:3.30.300.130 103 191 1.5E-18 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily CF65_01221 fb226ae97ea32e063902f3e1c45eb22f 194 Gene3D G3DSA:2.60.300.12 2 100 1.2E-14 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CF65_01221 fb226ae97ea32e063902f3e1c45eb22f 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 5.9E-97 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CF65_01221 fb226ae97ea32e063902f3e1c45eb22f 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 101 1.3E-13 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CF65_01221 fb226ae97ea32e063902f3e1c45eb22f 194 Pfam PF01106 NifU-like domain 113 175 1.0E-18 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CF65_02108 86dc004dda1621a34b928bdad45b9beb 1057 SMART SM00563 447 559 6.4E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CF65_02108 86dc004dda1621a34b928bdad45b9beb 1057 Gene3D G3DSA:1.20.1250.20 11 412 7.9E-26 T 14-10-2018 CF65_02108 86dc004dda1621a34b928bdad45b9beb 1057 SUPERFAMILY SSF56801 643 1033 3.79E-71 T 14-10-2018 CF65_02108 86dc004dda1621a34b928bdad45b9beb 1057 Pfam PF01553 Acyltransferase 433 555 5.8E-18 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CF65_02108 86dc004dda1621a34b928bdad45b9beb 1057 Pfam PF07690 Major Facilitator Superfamily 49 376 7.9E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CF65_02108 86dc004dda1621a34b928bdad45b9beb 1057 ProSitePatterns PS00455 Putative AMP-binding domain signature. 792 803 - T 14-10-2018 IPR020845 AMP-binding, conserved site CF65_02108 86dc004dda1621a34b928bdad45b9beb 1057 SUPERFAMILY SSF69593 379 592 5.89E-24 T 14-10-2018 CF65_02108 86dc004dda1621a34b928bdad45b9beb 1057 Gene3D G3DSA:3.40.50.12780 617 1037 5.1E-74 T 14-10-2018 CF65_02108 86dc004dda1621a34b928bdad45b9beb 1057 SUPERFAMILY SSF103473 13 416 2.62E-26 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_02108 86dc004dda1621a34b928bdad45b9beb 1057 Pfam PF00501 AMP-binding enzyme 643 1033 3.4E-65 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CF65_00454 4dee478ee05be11f342b1ccfd2edd5d5 164 Gene3D G3DSA:1.10.3190.10 54 164 7.1E-34 T 14-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily CF65_00454 4dee478ee05be11f342b1ccfd2edd5d5 164 SUPERFAMILY SSF116960 1 164 7.72E-62 T 14-10-2018 CF65_00454 4dee478ee05be11f342b1ccfd2edd5d5 164 PIRSF PIRSF006272 1 164 1.2E-69 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CF65_00454 4dee478ee05be11f342b1ccfd2edd5d5 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 5.0E-77 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CF65_00454 4dee478ee05be11f342b1ccfd2edd5d5 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 35.218 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CF65_00454 4dee478ee05be11f342b1ccfd2edd5d5 164 Pfam PF03887 YfbU domain 1 164 1.9E-67 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CF65_00454 4dee478ee05be11f342b1ccfd2edd5d5 164 Gene3D G3DSA:1.10.287.680 1 53 2.4E-24 T 14-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily CF65_01780 288c02a6cf2dd928247f81f75bf0d32e 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 50 250 1.8E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01780 288c02a6cf2dd928247f81f75bf0d32e 257 Gene3D G3DSA:1.10.3720.10 1 250 1.4E-59 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01780 288c02a6cf2dd928247f81f75bf0d32e 257 SUPERFAMILY SSF161098 21 242 2.09E-50 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01780 288c02a6cf2dd928247f81f75bf0d32e 257 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 35 245 1.5E-75 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CF65_02952 f108cef304443da8a9b91e06999e51e8 164 TIGRFAM TIGR00077 lspA: signal peptidase II 5 161 3.3E-52 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CF65_02952 f108cef304443da8a9b91e06999e51e8 164 Pfam PF01252 Signal peptidase (SPase) II 16 155 6.8E-37 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CF65_02952 f108cef304443da8a9b91e06999e51e8 164 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 161 17.375 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CF65_02952 f108cef304443da8a9b91e06999e51e8 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 52 60 1.0E-16 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CF65_02952 f108cef304443da8a9b91e06999e51e8 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 136 152 1.0E-16 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CF65_02952 f108cef304443da8a9b91e06999e51e8 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 100 115 1.0E-16 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CF65_00879 7749b848f4da9445743ed29e784ec3c9 192 Pfam PF16964 Putative tight adherence pilin protein F 11 192 1.4E-46 T 14-10-2018 IPR031582 Putative tight adherence pilin protein F CF65_00191 6a8d9befddbf9d787cbc22240477a88c 149 Gene3D G3DSA:3.40.630.30 4 137 1.3E-16 T 14-10-2018 CF65_00191 6a8d9befddbf9d787cbc22240477a88c 149 SUPERFAMILY SSF55729 4 136 2.76E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase CF65_00124 f4283c7deb5ac32f68e2dc2233f5a136 107 Pfam PF13744 Helix-turn-helix domain 18 105 3.7E-16 T 14-10-2018 IPR039554 HigA2-like, helix-turn-helix domain CF65_00124 f4283c7deb5ac32f68e2dc2233f5a136 107 SUPERFAMILY SSF47413 40 103 2.74E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_00124 f4283c7deb5ac32f68e2dc2233f5a136 107 Gene3D G3DSA:1.10.260.40 14 107 6.4E-18 T 14-10-2018 CF65_01417 3de5edb39179d5c929796b854c0f710b 231 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 6 226 44.14 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CF65_01417 3de5edb39179d5c929796b854c0f710b 231 Gene3D G3DSA:3.90.550.10 1 230 6.2E-79 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01417 3de5edb39179d5c929796b854c0f710b 231 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 104 111 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CF65_01417 3de5edb39179d5c929796b854c0f710b 231 SUPERFAMILY SSF53448 6 226 4.55E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01417 3de5edb39179d5c929796b854c0f710b 231 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 228 1.3E-86 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CF65_01417 3de5edb39179d5c929796b854c0f710b 231 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 226 9.2E-76 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CF65_00402 417a97230f12538a3209c84377977ff4 239 Gene3D G3DSA:3.30.70.2970 46 147 4.5E-9 T 14-10-2018 CF65_00402 417a97230f12538a3209c84377977ff4 239 Pfam PF04402 Protein of unknown function (DUF541) 34 234 6.6E-17 T 14-10-2018 IPR007497 Protein of unknown function DUF541 CF65_00402 417a97230f12538a3209c84377977ff4 239 Gene3D G3DSA:3.30.110.170 43 214 4.5E-9 T 14-10-2018 CF65_00904 d17ecfba957cb0255ddcb9a78e909646 194 Gene3D G3DSA:1.10.10.880 1 66 2.3E-21 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 CF65_00904 d17ecfba957cb0255ddcb9a78e909646 194 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 130 181 1.7E-19 T 14-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal CF65_00904 d17ecfba957cb0255ddcb9a78e909646 194 PIRSF PIRSF016938 1 193 2.6E-39 T 14-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 CF65_00904 d17ecfba957cb0255ddcb9a78e909646 194 SUPERFAMILY SSF89069 1 66 1.06E-18 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 CF65_00904 d17ecfba957cb0255ddcb9a78e909646 194 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 83 2.3E-27 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CF65_01673 477dc25f2d0788e523c6d03f53ce581e 179 Gene3D G3DSA:2.40.30.20 1 64 3.9E-23 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_01673 477dc25f2d0788e523c6d03f53ce581e 179 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 2 177 2.1E-77 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CF65_01673 477dc25f2d0788e523c6d03f53ce581e 179 PIRSF PIRSF000498 1 179 2.9E-69 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CF65_01673 477dc25f2d0788e523c6d03f53ce581e 179 Gene3D G3DSA:2.40.30.20 69 166 1.1E-28 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CF65_01673 477dc25f2d0788e523c6d03f53ce581e 179 SUPERFAMILY SSF63380 2 66 1.28E-20 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CF65_01673 477dc25f2d0788e523c6d03f53ce581e 179 Pfam PF00677 Lumazine binding domain 7 62 4.1E-18 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CF65_01673 477dc25f2d0788e523c6d03f53ce581e 179 Pfam PF00677 Lumazine binding domain 75 160 7.2E-22 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CF65_01673 477dc25f2d0788e523c6d03f53ce581e 179 SUPERFAMILY SSF63380 68 175 2.38E-32 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CF65_01688 bad484d147eff856ed6dadad991278b4 1923 SMART SM01359 1019 1158 3.8E-29 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CF65_01688 bad484d147eff856ed6dadad991278b4 1923 Pfam PF00207 Alpha-2-macroglobulin family 1230 1319 7.0E-10 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CF65_01688 bad484d147eff856ed6dadad991278b4 1923 SUPERFAMILY SSF48239 1441 1718 1.46E-13 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CF65_01688 bad484d147eff856ed6dadad991278b4 1923 Gene3D G3DSA:1.50.10.20 1432 1720 2.7E-13 T 14-10-2018 CF65_01688 bad484d147eff856ed6dadad991278b4 1923 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 541 643 5.2E-18 T 14-10-2018 CF65_01688 bad484d147eff856ed6dadad991278b4 1923 Gene3D G3DSA:2.60.40.3710 37 128 5.4E-7 T 14-10-2018 CF65_01688 bad484d147eff856ed6dadad991278b4 1923 SMART SM01360 1229 1319 4.2E-15 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CF65_01688 bad484d147eff856ed6dadad991278b4 1923 Pfam PF01835 MG2 domain 653 750 5.4E-16 T 14-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 CF65_01688 bad484d147eff856ed6dadad991278b4 1923 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1019 1157 1.6E-9 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CF65_01688 bad484d147eff856ed6dadad991278b4 1923 Gene3D G3DSA:2.60.40.1930 651 755 7.2E-7 T 14-10-2018 CF65_00213 4ad016dacab9bad21ddb456917679b0a 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 14-10-2018 IPR019844 Cold-shock conserved site CF65_00213 4ad016dacab9bad21ddb456917679b0a 69 SUPERFAMILY SSF50249 4 68 1.21E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_00213 4ad016dacab9bad21ddb456917679b0a 69 PRINTS PR00050 Cold shock protein signature 42 60 1.7E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CF65_00213 4ad016dacab9bad21ddb456917679b0a 69 PRINTS PR00050 Cold shock protein signature 6 21 1.7E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CF65_00213 4ad016dacab9bad21ddb456917679b0a 69 PRINTS PR00050 Cold shock protein signature 27 36 1.7E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CF65_00213 4ad016dacab9bad21ddb456917679b0a 69 SMART SM00357 5 69 1.8E-24 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 CF65_00213 4ad016dacab9bad21ddb456917679b0a 69 PIRSF PIRSF002599 1 69 6.8E-22 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 CF65_00213 4ad016dacab9bad21ddb456917679b0a 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 1.2E-27 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CF65_00213 4ad016dacab9bad21ddb456917679b0a 69 Gene3D G3DSA:2.40.50.140 1 68 2.8E-27 T 14-10-2018 CF65_01614 6251a0a532ef8c632a55be75368c6cc2 314 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CF65_01614 6251a0a532ef8c632a55be75368c6cc2 314 Gene3D G3DSA:3.40.50.720 96 287 2.2E-107 T 14-10-2018 CF65_01614 6251a0a532ef8c632a55be75368c6cc2 314 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CF65_01614 6251a0a532ef8c632a55be75368c6cc2 314 SUPERFAMILY SSF51735 101 289 8.15E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01614 6251a0a532ef8c632a55be75368c6cc2 314 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 30 313 5.6E-25 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CF65_01614 6251a0a532ef8c632a55be75368c6cc2 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 288 1.0E-53 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CF65_01614 6251a0a532ef8c632a55be75368c6cc2 314 Gene3D G3DSA:3.40.50.720 24 312 2.2E-107 T 14-10-2018 CF65_01614 6251a0a532ef8c632a55be75368c6cc2 314 SUPERFAMILY SSF52283 1 125 4.16E-30 T 14-10-2018 CF65_00883 8faf0acbcfd50f5dc0d0ac982c1d66ea 30 Pfam PF16951 Putative methionine and alanine importer, small subunit 1 30 3.9E-10 T 14-10-2018 IPR031596 Putative methionine and alanine importer, small subunit CF65_01360 a466805aeb2c6cfda963725f265d95bc 433 Pfam PF00557 Metallopeptidase family M24 177 406 5.4E-60 T 14-10-2018 IPR000994 Peptidase M24 CF65_01360 a466805aeb2c6cfda963725f265d95bc 433 Gene3D G3DSA:3.40.350.10 10 167 2.2E-42 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CF65_01360 a466805aeb2c6cfda963725f265d95bc 433 Pfam PF05195 Aminopeptidase P, N-terminal domain 14 130 2.1E-33 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CF65_01360 a466805aeb2c6cfda963725f265d95bc 433 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 344 356 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CF65_01360 a466805aeb2c6cfda963725f265d95bc 433 SMART SM01011 9 143 1.2E-49 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CF65_01360 a466805aeb2c6cfda963725f265d95bc 433 Gene3D G3DSA:3.90.230.10 168 432 2.5E-99 T 14-10-2018 CF65_01360 a466805aeb2c6cfda963725f265d95bc 433 SUPERFAMILY SSF53092 9 170 6.28E-43 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CF65_01360 a466805aeb2c6cfda963725f265d95bc 433 SUPERFAMILY SSF55920 171 430 6.15E-82 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like CF65_03001 899aae4292800272f539f4de2670ffe6 127 SUPERFAMILY SSF51998 43 125 2.15E-24 T 14-10-2018 CF65_03001 899aae4292800272f539f4de2670ffe6 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.7E-72 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CF65_03001 899aae4292800272f539f4de2670ffe6 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 41.155 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CF65_03001 899aae4292800272f539f4de2670ffe6 127 Gene3D G3DSA:3.20.70.20 57 127 1.9E-25 T 14-10-2018 CF65_03001 899aae4292800272f539f4de2670ffe6 127 PIRSF PIRSF000378 2 127 4.1E-56 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CF65_03001 899aae4292800272f539f4de2670ffe6 127 Pfam PF01228 Glycine radical 16 108 2.7E-23 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 CF65_03001 899aae4292800272f539f4de2670ffe6 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 158 7.0E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 Pfam PF00009 Elongation factor Tu GTP binding domain 2 161 4.9E-29 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 SUPERFAMILY SSF50447 167 286 4.86E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 Gene3D G3DSA:1.10.10.10 553 613 1.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 SUPERFAMILY SSF46785 491 551 1.09E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 Pfam PF09107 Elongation factor SelB, winged helix 567 611 1.7E-13 T 14-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 Gene3D G3DSA:1.10.10.10 490 552 5.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 Pfam PF09106 Elongation factor SelB, winged helix 427 482 2.0E-15 T 14-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 SUPERFAMILY SSF46785 418 489 2.61E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 SUPERFAMILY SSF50465 270 353 5.04E-7 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 Gene3D G3DSA:3.40.50.300 1 167 7.2E-43 T 14-10-2018 CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 SUPERFAMILY SSF52540 2 186 1.95E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 613 1.6E-216 T 14-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 SUPERFAMILY SSF46785 561 613 2.34E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00892 f1f9bdbe20ccb36aa2a30d467115b22e 619 Gene3D G3DSA:2.40.30.10 168 285 2.4E-22 T 14-10-2018 CF65_02885 fd4b7a3c5114190c59eafb8934e43897 305 SUPERFAMILY SSF103481 41 140 5.75E-15 T 14-10-2018 CF65_02885 fd4b7a3c5114190c59eafb8934e43897 305 Pfam PF00892 EamA-like transporter family 156 293 3.7E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_02885 fd4b7a3c5114190c59eafb8934e43897 305 Pfam PF00892 EamA-like transporter family 7 140 4.8E-22 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 289 1.5E-84 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 Gene3D G3DSA:3.40.50.1980 180 293 8.7E-43 T 14-10-2018 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 Gene3D G3DSA:3.40.50.1980 22 179 1.2E-59 T 14-10-2018 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 SUPERFAMILY SSF53807 20 291 8.83E-98 T 14-10-2018 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00691 Adhesin B signature 204 222 6.2E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00691 Adhesin B signature 227 244 6.2E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00691 Adhesin B signature 178 195 6.2E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00691 Adhesin B signature 23 44 6.2E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00691 Adhesin B signature 48 66 6.2E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00691 Adhesin B signature 67 86 6.2E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00691 Adhesin B signature 249 267 6.2E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00690 Adhesin family signature 54 67 7.8E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00690 Adhesin family signature 231 249 7.8E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00690 Adhesin family signature 23 41 7.8E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00690 Adhesin family signature 178 199 7.8E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00690 Adhesin family signature 67 84 7.8E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CF65_02549 c958bf5027ebb843621fa53edd890f59 293 PRINTS PR00690 Adhesin family signature 257 276 7.8E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CF65_02972 35fa2a438415c4e8177f6e08c420e8f9 54 SUPERFAMILY SSF53383 2 52 2.02E-11 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02972 35fa2a438415c4e8177f6e08c420e8f9 54 Gene3D G3DSA:3.90.1150.10 1 53 9.6E-20 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_02802 5e0d409e245273cae8bd986ab218f88d 336 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 123 1.4E-25 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CF65_02802 5e0d409e245273cae8bd986ab218f88d 336 Gene3D G3DSA:3.40.50.720 3 322 7.9E-108 T 14-10-2018 CF65_02802 5e0d409e245273cae8bd986ab218f88d 336 SUPERFAMILY SSF51735 2 151 2.93E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02802 5e0d409e245273cae8bd986ab218f88d 336 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 224 1.4E-6 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 CF65_02802 5e0d409e245273cae8bd986ab218f88d 336 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 331 4.5E-145 T 14-10-2018 IPR030827 Inositol 2-dehydrogenase CF65_02802 5e0d409e245273cae8bd986ab218f88d 336 Gene3D G3DSA:3.30.360.10 142 272 7.9E-108 T 14-10-2018 CF65_02802 5e0d409e245273cae8bd986ab218f88d 336 SUPERFAMILY SSF55347 131 295 5.72E-33 T 14-10-2018 CF65_00437 78e7e09ce80d67303a2c8e9c9fbc13c8 284 SUPERFAMILY SSF110849 14 97 6.41E-14 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily CF65_00437 78e7e09ce80d67303a2c8e9c9fbc13c8 284 SUPERFAMILY SSF109709 102 185 1.18E-8 T 14-10-2018 CF65_00437 78e7e09ce80d67303a2c8e9c9fbc13c8 284 SMART SM00470 14 105 1.6E-7 T 14-10-2018 IPR003115 ParB/Sulfiredoxin CF65_00437 78e7e09ce80d67303a2c8e9c9fbc13c8 284 Pfam PF02195 ParB-like nuclease domain 16 90 1.7E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin CF65_00437 78e7e09ce80d67303a2c8e9c9fbc13c8 284 Pfam PF07506 RepB plasmid partitioning protein 99 270 4.2E-27 T 14-10-2018 IPR011111 RepB plasmid partition CF65_00437 78e7e09ce80d67303a2c8e9c9fbc13c8 284 Gene3D G3DSA:3.90.1530.30 31 87 4.8E-8 T 14-10-2018 CF65_01881 71ae6d5a54010992be4ffbcea4a7fb70 214 Gene3D G3DSA:3.40.50.300 1 214 5.7E-78 T 14-10-2018 CF65_01881 71ae6d5a54010992be4ffbcea4a7fb70 214 SUPERFAMILY SSF52540 1 212 5.01E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01881 71ae6d5a54010992be4ffbcea4a7fb70 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 5.4E-15 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CF65_01881 71ae6d5a54010992be4ffbcea4a7fb70 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 51.829 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CF65_01881 71ae6d5a54010992be4ffbcea4a7fb70 214 Pfam PF00406 Adenylate kinase 5 186 3.9E-59 T 14-10-2018 CF65_01881 71ae6d5a54010992be4ffbcea4a7fb70 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.3E-75 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CF65_01881 71ae6d5a54010992be4ffbcea4a7fb70 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CF65_01881 71ae6d5a54010992be4ffbcea4a7fb70 214 PRINTS PR00094 Adenylate kinase signature 32 46 1.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CF65_01881 71ae6d5a54010992be4ffbcea4a7fb70 214 PRINTS PR00094 Adenylate kinase signature 173 187 1.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CF65_01881 71ae6d5a54010992be4ffbcea4a7fb70 214 PRINTS PR00094 Adenylate kinase signature 4 17 1.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CF65_01881 71ae6d5a54010992be4ffbcea4a7fb70 214 PRINTS PR00094 Adenylate kinase signature 81 97 1.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CF65_01881 71ae6d5a54010992be4ffbcea4a7fb70 214 PRINTS PR00094 Adenylate kinase signature 156 171 1.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CF65_00777 e8fcb06f9ec88827a4b20856eec08e1a 738 SUPERFAMILY SSF48435 52 557 7.59E-62 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 CF65_00777 e8fcb06f9ec88827a4b20856eec08e1a 738 Gene3D G3DSA:1.10.530.10 576 738 1.0E-42 T 14-10-2018 CF65_00777 e8fcb06f9ec88827a4b20856eec08e1a 738 Gene3D G3DSA:1.10.1240.20 479 552 1.9E-14 T 14-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 CF65_00777 e8fcb06f9ec88827a4b20856eec08e1a 738 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 594 622 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CF65_00777 e8fcb06f9ec88827a4b20856eec08e1a 738 Pfam PF01464 Transglycosylase SLT domain 582 687 2.3E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 CF65_00777 e8fcb06f9ec88827a4b20856eec08e1a 738 Pfam PF14718 Soluble lytic murein transglycosylase L domain 483 552 2.3E-21 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CF65_00777 e8fcb06f9ec88827a4b20856eec08e1a 738 SUPERFAMILY SSF53955 583 723 2.88E-40 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily CF65_00777 e8fcb06f9ec88827a4b20856eec08e1a 738 Gene3D G3DSA:1.25.20.10 50 452 4.6E-66 T 14-10-2018 CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 Pfam PF02779 Transketolase, pyrimidine binding domain 594 788 3.0E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 Gene3D G3DSA:3.40.50.970 168 533 4.0E-146 T 14-10-2018 CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 933 8.6E-54 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 SMART SM00861 594 787 1.3E-60 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 PIRSF PIRSF000157 1 935 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 SUPERFAMILY SSF52518 122 542 2.47E-86 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 1.3E-17 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 Gene3D G3DSA:1.10.287.1150 82 167 6.6E-23 T 14-10-2018 CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 SUPERFAMILY SSF52518 576 794 1.08E-51 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 Pfam PF00676 Dehydrogenase E1 component 221 515 5.2E-54 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 Gene3D G3DSA:3.40.50.11610 724 930 5.7E-171 T 14-10-2018 CF65_02706 ecf8ce2dc48d4c42ea7caf942f337ef7 935 Gene3D G3DSA:3.40.50.12470 558 803 5.7E-171 T 14-10-2018 CF65_01947 e9a37e7689eb9f37dfaf3e2d25fa423e 287 SUPERFAMILY SSF52540 2 172 4.28E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01947 e9a37e7689eb9f37dfaf3e2d25fa423e 287 Pfam PF00005 ABC transporter 5 92 2.1E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01947 e9a37e7689eb9f37dfaf3e2d25fa423e 287 SUPERFAMILY SSF50331 188 283 2.1E-6 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01947 e9a37e7689eb9f37dfaf3e2d25fa423e 287 Gene3D G3DSA:3.40.50.300 1 169 9.3E-46 T 14-10-2018 CF65_01947 e9a37e7689eb9f37dfaf3e2d25fa423e 287 ProSitePatterns PS00211 ABC transporters family signature. 65 79 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01947 e9a37e7689eb9f37dfaf3e2d25fa423e 287 Gene3D G3DSA:2.40.50.140 170 209 9.4E-6 T 14-10-2018 CF65_01947 e9a37e7689eb9f37dfaf3e2d25fa423e 287 Gene3D G3DSA:2.40.50.100 210 245 9.4E-6 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 SUPERFAMILY SSF81653 219 314 2.35E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 147 713 2.0E-161 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 Pfam PF00702 haloacid dehalogenase-like hydrolase 412 625 1.0E-36 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 Pfam PF00122 E1-E2 ATPase 217 395 2.4E-49 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 PRINTS PR00943 Copper-transporting ATPase signature 588 605 1.9E-19 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 PRINTS PR00943 Copper-transporting ATPase signature 399 414 1.9E-19 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 PRINTS PR00943 Copper-transporting ATPase signature 18 32 1.9E-19 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 PRINTS PR00943 Copper-transporting ATPase signature 339 353 1.9E-19 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 PRINTS PR00943 Copper-transporting ATPase signature 186 205 1.9E-19 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 PRINTS PR00943 Copper-transporting ATPase signature 47 67 1.9E-19 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 SUPERFAMILY SSF81665 175 688 5.1E-14 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 Gene3D G3DSA:3.30.70.100 1 75 1.8E-20 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 Gene3D G3DSA:3.40.1110.10 427 543 6.4E-73 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 Gene3D G3DSA:2.70.150.20 211 320 4.9E-27 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 Pfam PF00403 Heavy-metal-associated domain 6 65 1.5E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 SUPERFAMILY SSF55008 1 73 2.62E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 SUPERFAMILY SSF56784 415 711 1.86E-49 T 14-10-2018 IPR036412 HAD-like superfamily CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 130 714 1.4E-151 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 Gene3D G3DSA:3.40.50.1000 397 663 6.4E-73 T 14-10-2018 IPR023214 HAD superfamily CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 418 424 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 523 694 3.8E-38 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 189 461 5.9E-39 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 558 568 7.6E-19 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 416 430 7.6E-19 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 266 280 7.6E-19 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 611 630 7.6E-19 T 14-10-2018 CF65_00128 f2a1df117658806b83a24fd953ec9ca8 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 646 7.6E-19 T 14-10-2018 CF65_00932 8c304cc153716fbec682e806544fcdac 313 Gene3D G3DSA:3.40.50.2300 33 294 5.3E-108 T 14-10-2018 CF65_00932 8c304cc153716fbec682e806544fcdac 313 SUPERFAMILY SSF53822 28 312 1.67E-82 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_00932 8c304cc153716fbec682e806544fcdac 313 Pfam PF13407 Periplasmic binding protein domain 31 292 1.3E-64 T 14-10-2018 IPR025997 Periplasmic binding protein CF65_00932 8c304cc153716fbec682e806544fcdac 313 Gene3D G3DSA:3.40.50.2300 137 274 5.3E-108 T 14-10-2018 CF65_01741 24660191497aa5b6454e95e987f30cd0 141 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 1 134 2.9E-38 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CF65_01741 24660191497aa5b6454e95e987f30cd0 141 PIRSF PIRSF006113 1 99 1.4E-22 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CF65_01741 24660191497aa5b6454e95e987f30cd0 141 PIRSF PIRSF006113 90 141 2.4E-4 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CF65_01741 24660191497aa5b6454e95e987f30cd0 141 Gene3D G3DSA:3.30.479.10 1 141 1.2E-35 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 CF65_01741 24660191497aa5b6454e95e987f30cd0 141 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 117 8.7E-31 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CF65_01741 24660191497aa5b6454e95e987f30cd0 141 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 140 7.9E-37 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CF65_01741 24660191497aa5b6454e95e987f30cd0 141 SUPERFAMILY SSF55620 1 139 1.11E-36 T 14-10-2018 CF65_02429 71f408aa755df489b974eaced454b2cb 266 SUPERFAMILY SSF55920 2 254 4.97E-88 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like CF65_02429 71f408aa755df489b974eaced454b2cb 266 Hamap MF_01974 Methionine aminopeptidase [map]. 2 250 41.646 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CF65_02429 71f408aa755df489b974eaced454b2cb 266 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 248 3.4E-102 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CF65_02429 71f408aa755df489b974eaced454b2cb 266 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CF65_02429 71f408aa755df489b974eaced454b2cb 266 Pfam PF00557 Metallopeptidase family M24 12 241 1.1E-52 T 14-10-2018 IPR000994 Peptidase M24 CF65_02429 71f408aa755df489b974eaced454b2cb 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 2.0E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CF65_02429 71f408aa755df489b974eaced454b2cb 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 68 81 2.0E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CF65_02429 71f408aa755df489b974eaced454b2cb 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 2.0E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CF65_02429 71f408aa755df489b974eaced454b2cb 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 2.0E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CF65_02429 71f408aa755df489b974eaced454b2cb 266 Gene3D G3DSA:3.90.230.10 2 260 3.0E-107 T 14-10-2018 CF65_02860 42f94ac0f8a101a750e11c1178b39df6 534 Pfam PF14351 Domain of unknown function (DUF4401) 2 343 3.8E-53 T 14-10-2018 IPR025513 Domain of unknown function DUF4401 CF65_02860 42f94ac0f8a101a750e11c1178b39df6 534 Pfam PF14345 GDYXXLXY protein 373 526 6.2E-26 T 14-10-2018 IPR025833 GDYXXLXY protein CF65_01008 f8be4115a33ce3daef19745f41aafbf5 288 SUPERFAMILY SSF101386 26 131 8.67E-24 T 14-10-2018 CF65_01008 f8be4115a33ce3daef19745f41aafbf5 288 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 52 125 1.6E-27 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CF65_01008 f8be4115a33ce3daef19745f41aafbf5 288 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 193 252 1.8E-8 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CF65_01008 f8be4115a33ce3daef19745f41aafbf5 288 TIGRFAM TIGR00444 mazG: MazG family protein 35 282 2.1E-109 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG CF65_01008 f8be4115a33ce3daef19745f41aafbf5 288 SUPERFAMILY SSF101386 161 261 1.25E-24 T 14-10-2018 CF65_01008 f8be4115a33ce3daef19745f41aafbf5 288 Gene3D G3DSA:1.10.287.1080 25 150 6.9E-43 T 14-10-2018 CF65_01008 f8be4115a33ce3daef19745f41aafbf5 288 Gene3D G3DSA:1.10.287.1080 154 287 3.3E-48 T 14-10-2018 CF65_00135 640d7ea353e04b2ded2a9756d2038970 166 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 45.407 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CF65_00135 640d7ea353e04b2ded2a9756d2038970 166 SUPERFAMILY SSF89562 3 158 5.23E-42 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CF65_00135 640d7ea353e04b2ded2a9756d2038970 166 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 2.1E-61 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CF65_00135 640d7ea353e04b2ded2a9756d2038970 166 Pfam PF03737 Aldolase/RraA 6 152 8.1E-36 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CF65_00135 640d7ea353e04b2ded2a9756d2038970 166 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 5.9E-87 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CF65_00135 640d7ea353e04b2ded2a9756d2038970 166 Gene3D G3DSA:3.50.30.40 1 161 5.1E-58 T 14-10-2018 CF65_01029 f0c13f90b45236c9eae618bbfdfdf8b5 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 5 208 9.2E-105 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CF65_01029 f0c13f90b45236c9eae618bbfdfdf8b5 209 PIRSF PIRSF006102 4 209 2.5E-68 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CF65_01029 f0c13f90b45236c9eae618bbfdfdf8b5 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 10 196 1.2E-60 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CF65_01029 f0c13f90b45236c9eae618bbfdfdf8b5 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 3 208 35.844 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CF65_00069 c5c20e0326c335a4e693a1e019637b78 263 Pfam PF08794 Lipoprotein GNA1870 C terminal like 122 261 7.4E-34 T 14-10-2018 IPR014902 Lipoprotein GNA1870-related, C-terminal CF65_00069 c5c20e0326c335a4e693a1e019637b78 263 Gene3D G3DSA:2.40.160.90 149 263 8.0E-33 T 14-10-2018 CF65_00069 c5c20e0326c335a4e693a1e019637b78 263 SUPERFAMILY SSF56925 138 262 1.57E-19 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CF65_00069 c5c20e0326c335a4e693a1e019637b78 263 Gene3D G3DSA:2.60.40.1980 17 148 1.0E-53 T 14-10-2018 CF65_01781 5a675ee611c9159f3ce37f466c1d9e29 254 Gene3D G3DSA:3.40.190.10 27 251 1.5E-77 T 14-10-2018 CF65_01781 5a675ee611c9159f3ce37f466c1d9e29 254 PIRSF PIRSF004846 3 254 9.4E-73 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 CF65_01781 5a675ee611c9159f3ce37f466c1d9e29 254 SUPERFAMILY SSF53850 25 251 3.26E-64 T 14-10-2018 CF65_01781 5a675ee611c9159f3ce37f466c1d9e29 254 Pfam PF13531 Bacterial extracellular solute-binding protein 26 251 2.0E-45 T 14-10-2018 CF65_01781 5a675ee611c9159f3ce37f466c1d9e29 254 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 250 4.3E-82 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 CF65_01781 5a675ee611c9159f3ce37f466c1d9e29 254 Gene3D G3DSA:3.40.190.10 105 215 1.5E-77 T 14-10-2018 CF65_01997 172669861e73452a034d6055561fc286 207 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 202 8.8E-78 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 CF65_01997 172669861e73452a034d6055561fc286 207 Pfam PF01300 Telomere recombination 22 199 6.1E-45 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 CF65_01997 172669861e73452a034d6055561fc286 207 SUPERFAMILY SSF55821 1 204 4.58E-63 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CF65_01997 172669861e73452a034d6055561fc286 207 Gene3D G3DSA:3.90.870.10 1 207 4.4E-68 T 14-10-2018 CF65_02716 3d1c6a29cadcddcea4e0624e0415f644 414 Pfam PF01546 Peptidase family M20/M25/M40 145 408 1.6E-10 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 CF65_02716 3d1c6a29cadcddcea4e0624e0415f644 414 Gene3D G3DSA:3.40.630.10 10 406 1.4E-160 T 14-10-2018 CF65_02716 3d1c6a29cadcddcea4e0624e0415f644 414 PIRSF PIRSF037215 5 414 1.5E-169 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CF65_02716 3d1c6a29cadcddcea4e0624e0415f644 414 Pfam PF07687 Peptidase dimerisation domain 211 310 3.3E-10 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain CF65_02716 3d1c6a29cadcddcea4e0624e0415f644 414 Gene3D G3DSA:3.30.70.360 214 325 1.4E-160 T 14-10-2018 CF65_02716 3d1c6a29cadcddcea4e0624e0415f644 414 SUPERFAMILY SSF55031 214 325 7.59E-38 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CF65_02716 3d1c6a29cadcddcea4e0624e0415f644 414 SUPERFAMILY SSF53187 8 411 1.11E-70 T 14-10-2018 CF65_02716 3d1c6a29cadcddcea4e0624e0415f644 414 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 144 182 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CF65_02716 3d1c6a29cadcddcea4e0624e0415f644 414 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 79 88 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CF65_02716 3d1c6a29cadcddcea4e0624e0415f644 414 TIGRFAM TIGR01882 peptidase-T: peptidase T 8 411 1.1E-128 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CF65_00024 20309163b2dc6f73b7051c749b2d1b72 70 Gene3D G3DSA:1.10.260.40 2 70 1.1E-20 T 14-10-2018 CF65_00024 20309163b2dc6f73b7051c749b2d1b72 70 SUPERFAMILY SSF47413 4 69 6.17E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_00024 20309163b2dc6f73b7051c749b2d1b72 70 Pfam PF01381 Helix-turn-helix 14 67 1.7E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CF65_00024 20309163b2dc6f73b7051c749b2d1b72 70 SMART SM00530 13 68 2.9E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CF65_02283 16f99831d8b8d02925f2e641f56c9332 67 Gene3D G3DSA:3.40.50.2300 3 66 2.5E-10 T 14-10-2018 CF65_02283 16f99831d8b8d02925f2e641f56c9332 67 SUPERFAMILY SSF52172 7 66 4.13E-12 T 14-10-2018 IPR011006 CheY-like superfamily CF65_02283 16f99831d8b8d02925f2e641f56c9332 67 Pfam PF00072 Response regulator receiver domain 8 66 4.0E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CF65_01585 2926136f8e1a081078eb08c5d02fbf60 329 Gene3D G3DSA:1.10.20.140 132 203 3.2E-104 T 14-10-2018 CF65_01585 2926136f8e1a081078eb08c5d02fbf60 329 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 25 314 8.0E-122 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CF65_01585 2926136f8e1a081078eb08c5d02fbf60 329 Pfam PF01715 IPP transferase 59 303 2.6E-84 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CF65_01585 2926136f8e1a081078eb08c5d02fbf60 329 Gene3D G3DSA:3.40.50.300 29 310 3.2E-104 T 14-10-2018 CF65_01585 2926136f8e1a081078eb08c5d02fbf60 329 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 25 323 29.854 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CF65_01585 2926136f8e1a081078eb08c5d02fbf60 329 SUPERFAMILY SSF52540 26 172 9.96E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01609 9cd9b6abe019c77221e6395bd394f08b 280 Gene3D G3DSA:3.60.120.10 6 279 2.1E-68 T 14-10-2018 IPR005801 ADC synthase GO:0009058 CF65_01609 9cd9b6abe019c77221e6395bd394f08b 280 PRINTS PR00095 Anthranilate synthase component I signature 117 130 1.7E-6 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CF65_01609 9cd9b6abe019c77221e6395bd394f08b 280 PRINTS PR00095 Anthranilate synthase component I signature 215 229 1.7E-6 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CF65_01609 9cd9b6abe019c77221e6395bd394f08b 280 PRINTS PR00095 Anthranilate synthase component I signature 131 144 1.7E-6 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CF65_01609 9cd9b6abe019c77221e6395bd394f08b 280 Pfam PF00425 chorismate binding enzyme 30 272 1.3E-59 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CF65_01609 9cd9b6abe019c77221e6395bd394f08b 280 SUPERFAMILY SSF56322 20 277 2.35E-66 T 14-10-2018 IPR005801 ADC synthase GO:0009058 CF65_01022 4cb3171d5c7a0cc90ad6cad63a8be32c 383 Pfam PF03054 tRNA methyl transferase 24 378 1.8E-142 T 14-10-2018 CF65_01022 4cb3171d5c7a0cc90ad6cad63a8be32c 383 Gene3D G3DSA:3.40.50.620 9 230 2.7E-93 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01022 4cb3171d5c7a0cc90ad6cad63a8be32c 383 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 24 379 39.38 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CF65_01022 4cb3171d5c7a0cc90ad6cad63a8be32c 383 SUPERFAMILY SSF52402 13 313 1.11E-54 T 14-10-2018 CF65_01022 4cb3171d5c7a0cc90ad6cad63a8be32c 383 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 24 378 7.1E-157 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CF65_01022 4cb3171d5c7a0cc90ad6cad63a8be32c 383 Gene3D G3DSA:2.30.30.280 231 299 8.4E-27 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CF65_01022 4cb3171d5c7a0cc90ad6cad63a8be32c 383 Gene3D G3DSA:2.40.30.10 300 383 1.7E-31 T 14-10-2018 CF65_00835 eff523e91e315d19fd44be4a4f711d88 354 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 349 2.1E-120 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00835 eff523e91e315d19fd44be4a4f711d88 354 Gene3D G3DSA:3.40.50.2000 6 158 9.2E-122 T 14-10-2018 CF65_00835 eff523e91e315d19fd44be4a4f711d88 354 SUPERFAMILY SSF53756 3 353 3.47E-128 T 14-10-2018 CF65_00835 eff523e91e315d19fd44be4a4f711d88 354 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 182 344 1.1E-43 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 CF65_00835 eff523e91e315d19fd44be4a4f711d88 354 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 353 36.91 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00835 eff523e91e315d19fd44be4a4f711d88 354 Gene3D G3DSA:3.40.50.2000 159 317 9.2E-122 T 14-10-2018 CF65_00835 eff523e91e315d19fd44be4a4f711d88 354 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 5.0E-49 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00991 1cf9d598a016e0c26d6d58931b67a5c8 157 Pfam PF02810 SEC-C motif 137 154 9.5E-7 T 14-10-2018 IPR004027 SEC-C motif CF65_00991 1cf9d598a016e0c26d6d58931b67a5c8 157 Gene3D G3DSA:3.10.450.50 2 157 1.2E-51 T 14-10-2018 CF65_00991 1cf9d598a016e0c26d6d58931b67a5c8 157 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 5 131 26.559 T 14-10-2018 IPR023006 Uncharacterised protein family UPF0225 CF65_00991 1cf9d598a016e0c26d6d58931b67a5c8 157 SUPERFAMILY SSF54427 29 132 3.59E-32 T 14-10-2018 IPR032710 NTF2-like domain superfamily CF65_00991 1cf9d598a016e0c26d6d58931b67a5c8 157 SUPERFAMILY SSF103642 136 156 3.27E-7 T 14-10-2018 CF65_02232 d12bf1eff4dedbf3702044377e323399 409 SUPERFAMILY SSF46785 13 73 3.16E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_02232 d12bf1eff4dedbf3702044377e323399 409 SUPERFAMILY SSF53067 204 397 2.72E-14 T 14-10-2018 CF65_02232 d12bf1eff4dedbf3702044377e323399 409 SUPERFAMILY SSF53067 90 200 7.45E-6 T 14-10-2018 CF65_02232 d12bf1eff4dedbf3702044377e323399 409 Pfam PF00480 ROK family 291 386 4.6E-6 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CF65_02232 d12bf1eff4dedbf3702044377e323399 409 Gene3D G3DSA:1.10.10.10 2 77 3.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02232 d12bf1eff4dedbf3702044377e323399 409 Gene3D G3DSA:3.30.420.40 90 383 5.0E-32 T 14-10-2018 CF65_02232 d12bf1eff4dedbf3702044377e323399 409 Gene3D G3DSA:3.30.420.40 203 374 5.0E-32 T 14-10-2018 CF65_01919 6a496682a2abac9bf71b79cef7f20bc6 151 SUPERFAMILY SSF75420 3 83 5.49E-25 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily CF65_01919 6a496682a2abac9bf71b79cef7f20bc6 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 8.7E-18 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CF65_01919 6a496682a2abac9bf71b79cef7f20bc6 151 Pfam PF02576 RimP N-terminal domain 12 83 7.0E-29 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CF65_01919 6a496682a2abac9bf71b79cef7f20bc6 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 23.802 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CF65_01919 6a496682a2abac9bf71b79cef7f20bc6 151 Gene3D G3DSA:3.30.300.70 1 80 4.4E-25 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily CF65_01919 6a496682a2abac9bf71b79cef7f20bc6 151 SUPERFAMILY SSF74942 84 151 7.06E-17 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CF65_01740 456898d366a0fb0c58e7afbe5b8a11d2 202 PIRSF PIRSF000370 2 202 2.4E-40 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CF65_01740 456898d366a0fb0c58e7afbe5b8a11d2 202 Pfam PF13394 4Fe-4S single cluster domain 25 100 4.6E-9 T 14-10-2018 CF65_01740 456898d366a0fb0c58e7afbe5b8a11d2 202 Gene3D G3DSA:3.20.20.70 3 202 1.6E-50 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_01740 456898d366a0fb0c58e7afbe5b8a11d2 202 Pfam PF04055 Radical SAM superfamily 28 111 2.9E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CF65_01740 456898d366a0fb0c58e7afbe5b8a11d2 202 SUPERFAMILY SSF102114 29 115 6.41E-16 T 14-10-2018 CF65_01740 456898d366a0fb0c58e7afbe5b8a11d2 202 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 202 35.257 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CF65_01526 354885388252d98a11edd89c831b9a94 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 254 1.9E-58 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CF65_01526 354885388252d98a11edd89c831b9a94 259 SUPERFAMILY SSF53850 8 257 2.72E-60 T 14-10-2018 CF65_01526 354885388252d98a11edd89c831b9a94 259 Gene3D G3DSA:3.40.190.10 37 248 2.4E-68 T 14-10-2018 CF65_01526 354885388252d98a11edd89c831b9a94 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 60 73 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site CF65_01526 354885388252d98a11edd89c831b9a94 259 SMART SM00062 37 256 3.0E-75 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CF65_01526 354885388252d98a11edd89c831b9a94 259 Gene3D G3DSA:3.40.190.10 120 217 2.4E-68 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 Gene3D G3DSA:3.30.390.30 344 456 9.2E-49 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 SUPERFAMILY SSF51905 5 377 3.99E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 5.0E-67 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 5.0E-67 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 5.0E-67 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.0E-67 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 5.0E-67 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 5.0E-67 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.0E-67 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 5.0E-67 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 5.0E-67 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 324 8.9E-68 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 456 5.7E-212 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PIRSF PIRSF000350 1 452 1.9E-94 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 455 1.4E-36 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 Gene3D G3DSA:3.50.50.60 149 266 1.6E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 SUPERFAMILY SSF55424 342 456 1.72E-37 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 Gene3D G3DSA:3.50.50.60 5 324 1.6E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 5.1E-30 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 5.1E-30 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.1E-30 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 5.1E-30 T 14-10-2018 CF65_01306 4cf855a21720649afac1b9b8a1ee8a3d 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 5.1E-30 T 14-10-2018 CF65_02125 b8ce1c1ec12e627f30bebf5f60b08a5a 310 SUPERFAMILY SSF52402 3 154 4.02E-22 T 14-10-2018 CF65_02125 b8ce1c1ec12e627f30bebf5f60b08a5a 310 Gene3D G3DSA:3.40.50.12370 1 309 5.0E-101 T 14-10-2018 CF65_02125 b8ce1c1ec12e627f30bebf5f60b08a5a 310 SUPERFAMILY SSF52402 157 306 9.21E-22 T 14-10-2018 CF65_02125 b8ce1c1ec12e627f30bebf5f60b08a5a 310 Pfam PF00582 Universal stress protein family 157 304 1.6E-14 T 14-10-2018 IPR006016 UspA CF65_02125 b8ce1c1ec12e627f30bebf5f60b08a5a 310 Pfam PF00582 Universal stress protein family 3 149 5.0E-16 T 14-10-2018 IPR006016 UspA CF65_02125 b8ce1c1ec12e627f30bebf5f60b08a5a 310 PRINTS PR01438 Universal stress protein signature 282 304 4.8E-6 T 14-10-2018 IPR006015 Universal stress protein A CF65_02125 b8ce1c1ec12e627f30bebf5f60b08a5a 310 PRINTS PR01438 Universal stress protein signature 264 276 4.8E-6 T 14-10-2018 IPR006015 Universal stress protein A CF65_02125 b8ce1c1ec12e627f30bebf5f60b08a5a 310 PRINTS PR01438 Universal stress protein signature 156 174 4.8E-6 T 14-10-2018 IPR006015 Universal stress protein A CF65_02947 a65f1bb83d25e98f1fd1c2104658b9a9 308 SUPERFAMILY SSF52374 16 175 7.32E-35 T 14-10-2018 CF65_02947 a65f1bb83d25e98f1fd1c2104658b9a9 308 SMART SM00904 183 307 2.0E-63 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 CF65_02947 a65f1bb83d25e98f1fd1c2104658b9a9 308 Gene3D G3DSA:3.40.50.620 1 186 2.3E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02947 a65f1bb83d25e98f1fd1c2104658b9a9 308 Pfam PF01687 Riboflavin kinase 184 306 1.7E-39 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 CF65_02947 a65f1bb83d25e98f1fd1c2104658b9a9 308 SUPERFAMILY SSF82114 174 307 7.19E-47 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CF65_02947 a65f1bb83d25e98f1fd1c2104658b9a9 308 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 76 1.2E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CF65_02947 a65f1bb83d25e98f1fd1c2104658b9a9 308 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 1.1E-120 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CF65_02947 a65f1bb83d25e98f1fd1c2104658b9a9 308 Pfam PF06574 FAD synthetase 12 167 8.0E-57 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CF65_02947 a65f1bb83d25e98f1fd1c2104658b9a9 308 PIRSF PIRSF004491 1 308 3.2E-106 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CF65_02947 a65f1bb83d25e98f1fd1c2104658b9a9 308 Gene3D G3DSA:2.40.30.30 188 308 5.5E-43 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CF65_00855 3b77f6df8fae21f902db054063271392 220 SUPERFAMILY SSF161098 8 199 2.49E-35 T 14-10-2018 IPR035906 MetI-like superfamily CF65_00855 3b77f6df8fae21f902db054063271392 220 Gene3D G3DSA:1.10.3720.10 1 216 2.8E-45 T 14-10-2018 IPR035906 MetI-like superfamily CF65_00855 3b77f6df8fae21f902db054063271392 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 204 9.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_00855 3b77f6df8fae21f902db054063271392 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 108 6.2E-13 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CF65_00256 9d8095c0caf22013f75fef9e8af3b1f2 285 Gene3D G3DSA:3.30.70.1070 205 282 4.1E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CF65_00256 9d8095c0caf22013f75fef9e8af3b1f2 285 Pfam PF05036 Sporulation related domain 211 280 1.1E-5 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 CF65_00256 9d8095c0caf22013f75fef9e8af3b1f2 285 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 36 161 21.809 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CF65_00256 9d8095c0caf22013f75fef9e8af3b1f2 285 SUPERFAMILY SSF110997 211 281 2.62E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CF65_00256 9d8095c0caf22013f75fef9e8af3b1f2 285 Pfam PF03330 Lytic transglycolase 70 157 1.8E-22 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CF65_00256 9d8095c0caf22013f75fef9e8af3b1f2 285 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 71 271 3.0E-65 T 14-10-2018 IPR012997 Rare lipoprotein A CF65_00256 9d8095c0caf22013f75fef9e8af3b1f2 285 SUPERFAMILY SSF50685 65 163 4.81E-10 T 14-10-2018 IPR036908 RlpA-like domain superfamily CF65_00256 9d8095c0caf22013f75fef9e8af3b1f2 285 Gene3D G3DSA:2.40.40.10 68 162 3.1E-32 T 14-10-2018 IPR036908 RlpA-like domain superfamily CF65_02575 fbf31e0749419b575f2f307abf6acf40 230 Pfam PF04172 LrgB-like family 12 224 3.0E-68 T 14-10-2018 IPR007300 CidB/LrgB family CF65_02575 fbf31e0749419b575f2f307abf6acf40 230 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 4 227 4.8E-92 T 14-10-2018 IPR005261 Conserved hypothetical protein CHP00659 CF65_00106 0d3934c4001e8d34449d64631d95f7e3 367 Pfam PF04551 GcpE protein 13 354 7.7E-133 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CF65_00106 0d3934c4001e8d34449d64631d95f7e3 367 Gene3D G3DSA:3.20.20.20 2 261 8.5E-106 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CF65_00106 0d3934c4001e8d34449d64631d95f7e3 367 PIRSF PIRSF004640 1 364 2.0E-147 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CF65_00106 0d3934c4001e8d34449d64631d95f7e3 367 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.015 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CF65_00106 0d3934c4001e8d34449d64631d95f7e3 367 SUPERFAMILY SSF51717 16 208 3.3E-11 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CF65_00106 0d3934c4001e8d34449d64631d95f7e3 367 SUPERFAMILY SSF56014 265 365 5.76E-13 T 14-10-2018 CF65_00106 0d3934c4001e8d34449d64631d95f7e3 367 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 2.1E-125 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CF65_00106 0d3934c4001e8d34449d64631d95f7e3 367 Gene3D G3DSA:3.30.413.10 262 361 9.1E-24 T 14-10-2018 CF65_02992 382528ab9b31c2345797d9dd06d779df 341 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 165 338 8.1E-14 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CF65_02992 382528ab9b31c2345797d9dd06d779df 341 SUPERFAMILY SSF53335 10 337 4.97E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02992 382528ab9b31c2345797d9dd06d779df 341 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 322 332 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site CF65_02992 382528ab9b31c2345797d9dd06d779df 341 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 5 338 7.4E-159 T 14-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 CF65_02992 382528ab9b31c2345797d9dd06d779df 341 Gene3D G3DSA:3.40.1350.30 20 167 3.3E-62 T 14-10-2018 CF65_02992 382528ab9b31c2345797d9dd06d779df 341 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 272 303 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site CF65_02992 382528ab9b31c2345797d9dd06d779df 341 Gene3D G3DSA:3.40.50.150 14 333 3.3E-62 T 14-10-2018 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 Pfam PF03477 ATP cone domain 6 92 4.0E-17 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 4.3E-122 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 2.6E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 2.6E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 2.6E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 2.6E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 2.6E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 2.6E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 7.7E-186 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 SUPERFAMILY SSF51998 222 740 1.19E-170 T 14-10-2018 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 Gene3D G3DSA:3.20.70.20 78 741 9.8E-157 T 14-10-2018 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 SUPERFAMILY SSF48168 10 221 2.22E-73 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_01637 c7ddc18b8db1af78bac8d63d9b2f5ffc 756 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 4.1E-12 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_02787 82592d2bedb188a17a9a710133db5410 310 SUPERFAMILY SSF53822 17 309 1.14E-71 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_02787 82592d2bedb188a17a9a710133db5410 310 Gene3D G3DSA:3.40.50.2300 129 299 3.2E-74 T 14-10-2018 CF65_02787 82592d2bedb188a17a9a710133db5410 310 Gene3D G3DSA:3.40.50.2300 25 294 3.2E-74 T 14-10-2018 CF65_02787 82592d2bedb188a17a9a710133db5410 310 Pfam PF13407 Periplasmic binding protein domain 25 283 5.6E-49 T 14-10-2018 IPR025997 Periplasmic binding protein CF65_02743 5c3ec1fa3210b65178d090bea4a04eb5 209 Gene3D G3DSA:2.50.20.10 35 208 2.9E-44 T 14-10-2018 CF65_02743 5c3ec1fa3210b65178d090bea4a04eb5 209 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 5 209 29.061 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CF65_02743 5c3ec1fa3210b65178d090bea4a04eb5 209 SUPERFAMILY SSF89392 38 208 3.61E-54 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CF65_02743 5c3ec1fa3210b65178d090bea4a04eb5 209 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 10 208 9.5E-72 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CF65_02743 5c3ec1fa3210b65178d090bea4a04eb5 209 Pfam PF03550 Outer membrane lipoprotein LolB 54 207 7.6E-38 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CF65_00478 966402c7db644332426f1c7374cc511e 321 SUPERFAMILY SSF52728 159 312 6.02E-48 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CF65_00478 966402c7db644332426f1c7374cc511e 321 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 160 309 2.7E-49 T 14-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CF65_00478 966402c7db644332426f1c7374cc511e 321 Pfam PF03610 PTS system fructose IIA component 4 116 3.8E-27 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CF65_00478 966402c7db644332426f1c7374cc511e 321 Gene3D G3DSA:3.40.50.510 1 138 1.3E-37 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CF65_00478 966402c7db644332426f1c7374cc511e 321 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 115 1.8E-39 T 14-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CF65_00478 966402c7db644332426f1c7374cc511e 321 SUPERFAMILY SSF53062 1 129 2.75E-34 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CF65_00478 966402c7db644332426f1c7374cc511e 321 Pfam PF03830 PTS system sorbose subfamily IIB component 161 307 1.5E-47 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CF65_00478 966402c7db644332426f1c7374cc511e 321 Gene3D G3DSA:3.40.35.10 159 319 8.3E-52 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CF65_02411 9569f2f3bce7367be075f0e1731a7269 274 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 247 27.008 T 14-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 CF65_02411 9569f2f3bce7367be075f0e1731a7269 274 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 6.7E-36 T 14-10-2018 CF65_01074 3d78ebce9106d45a87e5bf799ed9b69f 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 15 115 1.1E-35 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CF65_01074 3d78ebce9106d45a87e5bf799ed9b69f 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 69 80 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CF65_01074 3d78ebce9106d45a87e5bf799ed9b69f 118 Gene3D G3DSA:1.10.3830.10 1 118 6.8E-40 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CF65_02872 09c5665bfdf88017904011628b344171 188 Pfam PF07445 Primosomal replication protein priC 11 184 1.0E-36 T 14-10-2018 IPR010890 Primosomal replication PriB/PriC CF65_02872 09c5665bfdf88017904011628b344171 188 Gene3D G3DSA:1.20.1270.340 2 92 2.4E-5 T 14-10-2018 IPR038338 PriB/PriC superfamily CF65_01354 0b1afceb3b989de4446faba170c64266 251 Gene3D G3DSA:3.60.140.10 3 251 2.6E-90 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily CF65_01354 0b1afceb3b989de4446faba170c64266 251 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 30 249 1.9E-71 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase CF65_01354 0b1afceb3b989de4446faba170c64266 251 SUPERFAMILY SSF64438 6 249 5.31E-85 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CF65_01354 0b1afceb3b989de4446faba170c64266 251 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 25 248 2.1E-76 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase CF65_01615 422767af94c30a532bdcc76efe8ca2f3 394 Pfam PF02687 FtsX-like permease family 292 387 4.3E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CF65_01615 422767af94c30a532bdcc76efe8ca2f3 394 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 394 3.9E-130 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CF65_01615 422767af94c30a532bdcc76efe8ca2f3 394 Pfam PF12704 MacB-like periplasmic core domain 29 202 3.4E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain CF65_02577 1d5d9e0f293e0676f3964112c5bb6737 166 Gene3D G3DSA:2.40.50.90 29 163 9.4E-31 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily CF65_02577 1d5d9e0f293e0676f3964112c5bb6737 166 Pfam PF00565 Staphylococcal nuclease homologue 56 152 1.3E-23 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 CF65_02577 1d5d9e0f293e0676f3964112c5bb6737 166 SUPERFAMILY SSF50199 24 158 1.7E-36 T 14-10-2018 CF65_02577 1d5d9e0f293e0676f3964112c5bb6737 166 SMART SM00318 30 152 1.6E-35 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 CF65_00664 0dda8992432c7326a1553531e2b779d5 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 1.0E-64 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CF65_00664 0dda8992432c7326a1553531e2b779d5 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CF65_00664 0dda8992432c7326a1553531e2b779d5 185 Gene3D G3DSA:1.20.120.1760 4 181 5.1E-15 T 14-10-2018 CF65_00664 0dda8992432c7326a1553531e2b779d5 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.0E-16 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CF65_00664 0dda8992432c7326a1553531e2b779d5 185 PIRSF PIRSF000847 1 185 9.3E-45 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CF65_02511 9179d45bce605cfef3eff703c366e2b4 1107 Pfam PF12795 Mechanosensitive ion channel porin domain 43 271 8.6E-39 T 14-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CF65_02511 9179d45bce605cfef3eff703c366e2b4 1107 Pfam PF00924 Mechanosensitive ion channel 883 1082 1.5E-57 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CF65_02511 9179d45bce605cfef3eff703c366e2b4 1107 Gene3D G3DSA:2.30.30.60 941 990 2.2E-13 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily CF65_02511 9179d45bce605cfef3eff703c366e2b4 1107 SUPERFAMILY SSF50182 926 990 9.81E-17 T 14-10-2018 IPR010920 LSM domain superfamily CF65_02511 9179d45bce605cfef3eff703c366e2b4 1107 SUPERFAMILY SSF82689 993 1093 1.09E-25 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CF65_02511 9179d45bce605cfef3eff703c366e2b4 1107 Gene3D G3DSA:3.30.70.100 993 1087 3.8E-20 T 14-10-2018 CF65_02511 9179d45bce605cfef3eff703c366e2b4 1107 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 492 822 1.9E-92 T 14-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CF65_02511 9179d45bce605cfef3eff703c366e2b4 1107 SUPERFAMILY SSF82861 839 924 1.83E-7 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CF65_02511 9179d45bce605cfef3eff703c366e2b4 1107 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 955 989 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CF65_01528 9b90d8fb2ca27b99057b193599e976f4 431 Gene3D G3DSA:3.50.50.60 34 388 2.1E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01528 9b90d8fb2ca27b99057b193599e976f4 431 Pfam PF01266 FAD dependent oxidoreductase 34 386 1.0E-57 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CF65_01528 9b90d8fb2ca27b99057b193599e976f4 431 Gene3D G3DSA:3.30.9.10 126 349 2.1E-75 T 14-10-2018 CF65_01528 9b90d8fb2ca27b99057b193599e976f4 431 SUPERFAMILY SSF51905 33 394 1.94E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01510 b969065c061987cc42ebb5d068ddf111 552 Pfam PF00005 ABC transporter 355 504 1.3E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01510 b969065c061987cc42ebb5d068ddf111 552 SUPERFAMILY SSF52540 338 551 1.59E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01510 b969065c061987cc42ebb5d068ddf111 552 SUPERFAMILY SSF90123 12 324 1.7E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_01510 b969065c061987cc42ebb5d068ddf111 552 Gene3D G3DSA:3.40.50.300 332 552 7.2E-75 T 14-10-2018 CF65_01510 b969065c061987cc42ebb5d068ddf111 552 Pfam PF00664 ABC transporter transmembrane region 28 289 4.1E-24 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CF65_01510 b969065c061987cc42ebb5d068ddf111 552 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 12 533 5.3E-101 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 CF65_01510 b969065c061987cc42ebb5d068ddf111 552 Gene3D G3DSA:1.20.1560.10 9 322 8.4E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_01510 b969065c061987cc42ebb5d068ddf111 552 SMART SM00382 364 550 5.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 ProSitePatterns PS01068 OmpA-like domain. 265 309 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 Pfam PF01389 OmpA-like transmembrane domain 23 211 5.6E-67 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 SUPERFAMILY SSF103088 222 342 2.09E-35 T 14-10-2018 IPR036737 OmpA-like domain superfamily CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 PRINTS PR01022 Outer membrane protein A signature 287 306 3.7E-13 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 PRINTS PR01022 Outer membrane protein A signature 221 236 3.7E-13 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 PRINTS PR01022 Outer membrane protein A signature 321 334 3.7E-13 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 PRINTS PR01022 Outer membrane protein A signature 110 126 3.7E-13 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 PRINTS PR01021 OMPA domain signature 233 255 1.3E-22 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 PRINTS PR01021 OMPA domain signature 263 278 1.3E-22 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 PRINTS PR01021 OMPA domain signature 278 294 1.3E-22 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 Pfam PF00691 OmpA family 232 323 3.3E-23 T 14-10-2018 IPR006665 OmpA-like domain CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 Gene3D G3DSA:2.40.160.20 22 209 4.7E-53 T 14-10-2018 CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 SUPERFAMILY SSF56925 22 213 1.6E-38 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CF65_02458 b9987bc49d3477043f2a413ff37b67e0 346 Gene3D G3DSA:3.30.1330.60 211 346 6.9E-49 T 14-10-2018 IPR036737 OmpA-like domain superfamily CF65_00610 bc113123670f7707020d1a78f69ef88c 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 227 255 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CF65_00610 bc113123670f7707020d1a78f69ef88c 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 90 1.3E-20 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 CF65_00610 bc113123670f7707020d1a78f69ef88c 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 331 8.9E-118 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CF65_00610 bc113123670f7707020d1a78f69ef88c 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 328 34.512 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CF65_00610 bc113123670f7707020d1a78f69ef88c 340 Gene3D G3DSA:3.40.1390.10 1 101 1.0E-27 T 14-10-2018 CF65_00610 bc113123670f7707020d1a78f69ef88c 340 SUPERFAMILY SSF51161 32 318 1.22E-84 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily CF65_00610 bc113123670f7707020d1a78f69ef88c 340 Gene3D G3DSA:2.160.10.10 102 310 2.8E-63 T 14-10-2018 CF65_00610 bc113123670f7707020d1a78f69ef88c 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 257 7.5E-6 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_00610 bc113123670f7707020d1a78f69ef88c 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 146 2.4E-10 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_00610 bc113123670f7707020d1a78f69ef88c 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 147 181 1.7E-9 T 14-10-2018 IPR001451 Hexapeptide repeat CF65_01597 bdbd2b1bbbfbf3e69cf9d653ae0154d2 208 Hamap MF_00045 Oligoribonuclease [orn]. 29 207 43.066 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 CF65_01597 bdbd2b1bbbfbf3e69cf9d653ae0154d2 208 SMART SM00479 33 206 9.7E-29 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_01597 bdbd2b1bbbfbf3e69cf9d653ae0154d2 208 Gene3D G3DSA:3.30.420.10 24 208 6.8E-74 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CF65_01597 bdbd2b1bbbfbf3e69cf9d653ae0154d2 208 Pfam PF00929 Exonuclease 35 197 3.7E-37 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CF65_01597 bdbd2b1bbbfbf3e69cf9d653ae0154d2 208 SUPERFAMILY SSF53098 28 207 1.28E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_02579 9c547d1958c950d9ac816d007d3bbca8 398 Pfam PF00266 Aminotransferase class-V 21 386 9.6E-128 T 14-10-2018 IPR000192 Aminotransferase class V domain CF65_02579 9c547d1958c950d9ac816d007d3bbca8 398 SUPERFAMILY SSF53383 14 395 2.5E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02579 9c547d1958c950d9ac816d007d3bbca8 398 Gene3D G3DSA:3.90.1150.10 9 390 9.5E-127 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_02579 9c547d1958c950d9ac816d007d3bbca8 398 Gene3D G3DSA:3.40.640.10 32 289 9.5E-127 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_02231 ae540a724de6e8c3e2b3b739b6a2d782 242 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 216 25.406 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CF65_02231 ae540a724de6e8c3e2b3b739b6a2d782 242 Pfam PF13500 AAA domain 3 217 1.9E-28 T 14-10-2018 CF65_02231 ae540a724de6e8c3e2b3b739b6a2d782 242 SUPERFAMILY SSF52540 1 218 8.5E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02231 ae540a724de6e8c3e2b3b739b6a2d782 242 PIRSF PIRSF006755 1 240 1.2E-71 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CF65_02231 ae540a724de6e8c3e2b3b739b6a2d782 242 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 184 2.2E-38 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CF65_02231 ae540a724de6e8c3e2b3b739b6a2d782 242 Gene3D G3DSA:3.40.50.300 2 231 3.8E-49 T 14-10-2018 CF65_02275 7c35d62931e83ac01a69cbd62a4335cb 49 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 43 1.0E-10 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 CF65_02275 7c35d62931e83ac01a69cbd62a4335cb 49 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 48 6.6E-25 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 CF65_02171 8d3903d01f87bec4c13142778f2a5af5 311 Gene3D G3DSA:3.40.50.10490 2 191 2.2E-62 T 14-10-2018 CF65_02171 8d3903d01f87bec4c13142778f2a5af5 311 SUPERFAMILY SSF53697 2 303 1.8E-64 T 14-10-2018 CF65_02171 8d3903d01f87bec4c13142778f2a5af5 311 PIRSF PIRSF004692 1 311 1.1E-131 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CF65_02171 8d3903d01f87bec4c13142778f2a5af5 311 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 41 308 1.4E-130 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CF65_02171 8d3903d01f87bec4c13142778f2a5af5 311 Pfam PF00571 CBS domain 263 307 1.5E-7 T 14-10-2018 IPR000644 CBS domain CF65_02171 8d3903d01f87bec4c13142778f2a5af5 311 Pfam PF00571 CBS domain 201 250 7.8E-5 T 14-10-2018 IPR000644 CBS domain CF65_02171 8d3903d01f87bec4c13142778f2a5af5 311 Gene3D G3DSA:3.10.580.10 192 311 9.9E-34 T 14-10-2018 CF65_02171 8d3903d01f87bec4c13142778f2a5af5 311 Pfam PF01380 SIS domain 37 167 5.4E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CF65_02171 8d3903d01f87bec4c13142778f2a5af5 311 SMART SM00116 204 251 0.46 T 14-10-2018 IPR000644 CBS domain CF65_02171 8d3903d01f87bec4c13142778f2a5af5 311 SMART SM00116 269 311 1.9 T 14-10-2018 IPR000644 CBS domain CF65_00056 61a17a716722b92dea0e68a54c8c1d26 172 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 148 32.004 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 CF65_00056 61a17a716722b92dea0e68a54c8c1d26 172 SUPERFAMILY SSF82093 30 143 9.02E-38 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 CF65_00056 61a17a716722b92dea0e68a54c8c1d26 172 Pfam PF03100 CcmE 4 138 2.2E-44 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 CF65_00056 61a17a716722b92dea0e68a54c8c1d26 172 Gene3D G3DSA:2.40.50.140 30 144 1.3E-40 T 14-10-2018 CF65_02567 98103fd0e444c2d79162cb2e7b24fc6f 45 Pfam PF03611 PTS system sugar-specific permease component 10 45 4.5E-9 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CF65_02601 1b2ac4a8db5fa61f679c3c040651963d 611 SMART SM00491 446 575 3.2E-49 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CF65_02601 1b2ac4a8db5fa61f679c3c040651963d 611 SUPERFAMILY SSF52540 6 568 5.45E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02601 1b2ac4a8db5fa61f679c3c040651963d 611 Gene3D G3DSA:3.40.50.300 1 256 6.0E-43 T 14-10-2018 CF65_02601 1b2ac4a8db5fa61f679c3c040651963d 611 Pfam PF13307 Helicase C-terminal domain 429 588 2.8E-34 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CF65_02601 1b2ac4a8db5fa61f679c3c040651963d 611 Gene3D G3DSA:3.40.50.300 411 607 7.1E-39 T 14-10-2018 CF65_00316 cf5fceb3ee73f3c21e7900846134afba 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 1.2E-64 T 14-10-2018 CF65_00316 cf5fceb3ee73f3c21e7900846134afba 272 Gene3D G3DSA:3.30.1240.10 84 196 2.7E-66 T 14-10-2018 CF65_00316 cf5fceb3ee73f3c21e7900846134afba 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 14-10-2018 CF65_00316 cf5fceb3ee73f3c21e7900846134afba 272 SUPERFAMILY SSF56784 1 271 1.3E-70 T 14-10-2018 IPR036412 HAD-like superfamily CF65_00316 cf5fceb3ee73f3c21e7900846134afba 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 9.4E-65 T 14-10-2018 IPR000150 Cof family GO:0016787 CF65_00316 cf5fceb3ee73f3c21e7900846134afba 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 80 1.6E-13 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CF65_00316 cf5fceb3ee73f3c21e7900846134afba 272 Gene3D G3DSA:3.40.50.1000 5 268 2.7E-66 T 14-10-2018 IPR023214 HAD superfamily CF65_00316 cf5fceb3ee73f3c21e7900846134afba 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 14-10-2018 CF65_01477 ecf684b061eda0e2dfcf714729dc25c0 717 Gene3D G3DSA:3.90.1570.50 68 240 2.9E-13 T 14-10-2018 CF65_01477 ecf684b061eda0e2dfcf714729dc25c0 717 Gene3D G3DSA:3.40.50.300 288 484 4.1E-37 T 14-10-2018 CF65_01477 ecf684b061eda0e2dfcf714729dc25c0 717 SUPERFAMILY SSF52540 288 497 3.71E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01477 ecf684b061eda0e2dfcf714729dc25c0 717 Pfam PF04851 Type III restriction enzyme, res subunit 288 464 6.6E-22 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CF65_01477 ecf684b061eda0e2dfcf714729dc25c0 717 SMART SM00487 285 499 0.0067 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_01477 ecf684b061eda0e2dfcf714729dc25c0 717 SUPERFAMILY SSF52540 429 639 6.82E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01477 ecf684b061eda0e2dfcf714729dc25c0 717 Gene3D G3DSA:3.40.50.300 485 665 2.6E-17 T 14-10-2018 CF65_01477 ecf684b061eda0e2dfcf714729dc25c0 717 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 180 1.1E-22 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CF65_01618 42be79b0d1811a93d967b040a38f7a5c 416 Pfam PF02687 FtsX-like permease family 304 409 1.7E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CF65_01618 42be79b0d1811a93d967b040a38f7a5c 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 3 415 1.6E-154 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CF65_01618 42be79b0d1811a93d967b040a38f7a5c 416 Pfam PF12704 MacB-like periplasmic core domain 26 237 1.0E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain CF65_01618 42be79b0d1811a93d967b040a38f7a5c 416 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 2 416 9.4E-207 T 14-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 CF65_02933 4ed0b710a36523091c8a736867d1c11e 256 Pfam PF00899 ThiF family 18 162 1.8E-34 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CF65_02933 4ed0b710a36523091c8a736867d1c11e 256 Gene3D G3DSA:3.40.50.720 2 256 1.2E-97 T 14-10-2018 CF65_02933 4ed0b710a36523091c8a736867d1c11e 256 SUPERFAMILY SSF69572 7 254 1.31E-61 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CF65_01156 0e35536ffdcb4bc0ce7d3cd093b02476 290 Gene3D G3DSA:3.90.1280.10 230 290 2.6E-17 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CF65_01156 0e35536ffdcb4bc0ce7d3cd093b02476 290 Pfam PF01430 Hsp33 protein 9 277 2.7E-78 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CF65_01156 0e35536ffdcb4bc0ce7d3cd093b02476 290 PIRSF PIRSF005261 1 290 2.7E-67 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CF65_01156 0e35536ffdcb4bc0ce7d3cd093b02476 290 Hamap MF_00117 33 kDa chaperonin [hslO]. 8 289 31.886 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CF65_01156 0e35536ffdcb4bc0ce7d3cd093b02476 290 SUPERFAMILY SSF64397 8 236 1.7E-74 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CF65_01156 0e35536ffdcb4bc0ce7d3cd093b02476 290 Gene3D G3DSA:3.55.30.10 4 180 5.0E-60 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CF65_01156 0e35536ffdcb4bc0ce7d3cd093b02476 290 SUPERFAMILY SSF118352 229 287 1.12E-15 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CF65_01156 0e35536ffdcb4bc0ce7d3cd093b02476 290 Gene3D G3DSA:1.10.287.480 182 229 6.9E-22 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CF65_03008 76ae20e5f4bfffd0627296fe82f8edba 302 Pfam PF01926 50S ribosome-binding GTPase 13 127 7.8E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_03008 76ae20e5f4bfffd0627296fe82f8edba 302 Hamap MF_00367 GTPase Era [era]. 8 299 36.024 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_03008 76ae20e5f4bfffd0627296fe82f8edba 302 TIGRFAM TIGR00436 era: GTP-binding protein Era 11 282 9.5E-121 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_03008 76ae20e5f4bfffd0627296fe82f8edba 302 Gene3D G3DSA:3.30.300.20 188 302 9.1E-44 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta CF65_03008 76ae20e5f4bfffd0627296fe82f8edba 302 Pfam PF07650 KH domain 211 287 5.0E-20 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_03008 76ae20e5f4bfffd0627296fe82f8edba 302 SUPERFAMILY SSF52540 13 207 7.01E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_03008 76ae20e5f4bfffd0627296fe82f8edba 302 SUPERFAMILY SSF54814 184 299 1.83E-43 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CF65_03008 76ae20e5f4bfffd0627296fe82f8edba 302 Gene3D G3DSA:3.40.50.300 5 186 9.8E-51 T 14-10-2018 CF65_03008 76ae20e5f4bfffd0627296fe82f8edba 302 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 172 4.9E-37 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CF65_03008 76ae20e5f4bfffd0627296fe82f8edba 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 13 33 1.8E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_03008 76ae20e5f4bfffd0627296fe82f8edba 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 81 99 1.8E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_00603 2e76bc98a42b4cfd6a69ef3e93d01db8 210 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 1 207 2.8E-89 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CF65_00603 2e76bc98a42b4cfd6a69ef3e93d01db8 210 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 3 208 31.253 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CF65_00603 2e76bc98a42b4cfd6a69ef3e93d01db8 210 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 153 170 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 CF65_00603 2e76bc98a42b4cfd6a69ef3e93d01db8 210 SUPERFAMILY SSF64005 2 202 3.14E-76 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CF65_00603 2e76bc98a42b4cfd6a69ef3e93d01db8 210 Pfam PF01255 Putative undecaprenyl diphosphate synthase 3 207 1.9E-77 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CF65_00603 2e76bc98a42b4cfd6a69ef3e93d01db8 210 Gene3D G3DSA:3.40.1180.10 1 209 1.2E-82 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CF65_00729 69d93c9c63c96b60d962834a5afafccb 305 Pfam PF00571 CBS domain 139 190 9.6E-4 T 14-10-2018 IPR000644 CBS domain CF65_00729 69d93c9c63c96b60d962834a5afafccb 305 Pfam PF00571 CBS domain 68 127 3.7E-9 T 14-10-2018 IPR000644 CBS domain CF65_00729 69d93c9c63c96b60d962834a5afafccb 305 SMART SM01091 206 284 3.4E-28 T 14-10-2018 IPR005170 Transporter-associated domain CF65_00729 69d93c9c63c96b60d962834a5afafccb 305 SUPERFAMILY SSF56176 204 289 1.31E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CF65_00729 69d93c9c63c96b60d962834a5afafccb 305 Gene3D G3DSA:3.10.580.10 47 199 1.4E-53 T 14-10-2018 CF65_00729 69d93c9c63c96b60d962834a5afafccb 305 Gene3D G3DSA:3.30.465.10 200 292 9.8E-30 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CF65_00729 69d93c9c63c96b60d962834a5afafccb 305 SUPERFAMILY SSF54631 65 201 1.46E-29 T 14-10-2018 CF65_00729 69d93c9c63c96b60d962834a5afafccb 305 Pfam PF03471 Transporter associated domain 207 282 2.6E-21 T 14-10-2018 IPR005170 Transporter-associated domain CF65_00729 69d93c9c63c96b60d962834a5afafccb 305 SMART SM00116 142 190 1.6 T 14-10-2018 IPR000644 CBS domain CF65_00729 69d93c9c63c96b60d962834a5afafccb 305 SMART SM00116 77 128 2.0 T 14-10-2018 IPR000644 CBS domain CF65_02354 0b67e53397b3a90c1fd0642b66fe63db 231 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 33.388 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CF65_02354 0b67e53397b3a90c1fd0642b66fe63db 231 Pfam PF01168 Alanine racemase, N-terminal domain 2 229 1.2E-30 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CF65_02354 0b67e53397b3a90c1fd0642b66fe63db 231 PIRSF PIRSF004848 1 231 2.7E-81 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CF65_02354 0b67e53397b3a90c1fd0642b66fe63db 231 Gene3D G3DSA:3.20.20.10 1 231 4.9E-87 T 14-10-2018 IPR029066 PLP-binding barrel CF65_02354 0b67e53397b3a90c1fd0642b66fe63db 231 SUPERFAMILY SSF51419 1 228 2.62E-82 T 14-10-2018 IPR029066 PLP-binding barrel CF65_02354 0b67e53397b3a90c1fd0642b66fe63db 231 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 78 92 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CF65_02354 0b67e53397b3a90c1fd0642b66fe63db 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.1E-94 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CF65_00080 de5b07d56dbac2c88505c23ba39f41b3 514 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 513 2.5E-271 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CF65_00080 de5b07d56dbac2c88505c23ba39f41b3 514 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 512 2.2E-272 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CF65_00080 de5b07d56dbac2c88505c23ba39f41b3 514 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 514 342.219 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CF65_02548 92d8dd2ef017c011cd083a80fea31abf 131 SUPERFAMILY SSF69721 18 131 1.44E-42 T 14-10-2018 IPR025526 DsrC-like domain superfamily CF65_02548 92d8dd2ef017c011cd083a80fea31abf 131 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 24 131 2.1E-50 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE CF65_02548 92d8dd2ef017c011cd083a80fea31abf 131 Gene3D G3DSA:1.10.10.370 61 131 2.0E-32 T 14-10-2018 CF65_02548 92d8dd2ef017c011cd083a80fea31abf 131 Pfam PF04358 DsrC like protein 25 131 3.2E-45 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE CF65_02548 92d8dd2ef017c011cd083a80fea31abf 131 PIRSF PIRSF006223 24 131 7.6E-44 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE CF65_02548 92d8dd2ef017c011cd083a80fea31abf 131 Gene3D G3DSA:3.30.1420.10 22 60 5.7E-13 T 14-10-2018 CF65_00820 0a7034fe4f2eeaed131d02aede834e46 377 Gene3D G3DSA:3.30.70.360 179 292 3.8E-141 T 14-10-2018 CF65_00820 0a7034fe4f2eeaed131d02aede834e46 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 374 3.1E-180 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CF65_00820 0a7034fe4f2eeaed131d02aede834e46 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 376 51.385 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CF65_00820 0a7034fe4f2eeaed131d02aede834e46 377 Pfam PF07687 Peptidase dimerisation domain 176 283 2.2E-24 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain CF65_00820 0a7034fe4f2eeaed131d02aede834e46 377 Gene3D G3DSA:3.40.630.10 8 366 3.8E-141 T 14-10-2018 CF65_00820 0a7034fe4f2eeaed131d02aede834e46 377 SUPERFAMILY SSF55031 180 289 6.13E-30 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CF65_00820 0a7034fe4f2eeaed131d02aede834e46 377 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 62 71 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CF65_00820 0a7034fe4f2eeaed131d02aede834e46 377 SUPERFAMILY SSF53187 2 375 2.17E-67 T 14-10-2018 CF65_00820 0a7034fe4f2eeaed131d02aede834e46 377 Pfam PF01546 Peptidase family M20/M25/M40 63 372 7.4E-43 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 CF65_01196 4c3470afef9dca5ed79676b27154b3f4 262 Pfam PF01553 Acyltransferase 77 190 4.7E-6 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CF65_01196 4c3470afef9dca5ed79676b27154b3f4 262 SUPERFAMILY SSF69593 49 251 5.23E-16 T 14-10-2018 CF65_01196 4c3470afef9dca5ed79676b27154b3f4 262 SMART SM00563 86 193 1.5E-7 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CF65_01952 b44ccd7e04a515165298d892d6a37906 363 Pfam PF13416 Bacterial extracellular solute-binding protein 62 331 5.9E-35 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein CF65_01952 b44ccd7e04a515165298d892d6a37906 363 SUPERFAMILY SSF53850 45 335 1.75E-44 T 14-10-2018 CF65_01952 b44ccd7e04a515165298d892d6a37906 363 Gene3D G3DSA:3.40.190.10 150 290 4.0E-33 T 14-10-2018 CF65_01952 b44ccd7e04a515165298d892d6a37906 363 Gene3D G3DSA:3.40.190.10 61 335 4.0E-33 T 14-10-2018 CF65_00699 ae6458f8df4905156976f85d9a6cbf02 685 Gene3D G3DSA:1.10.3720.10 419 681 7.4E-42 T 14-10-2018 IPR035906 MetI-like superfamily CF65_00699 ae6458f8df4905156976f85d9a6cbf02 685 Gene3D G3DSA:1.10.3720.10 135 404 3.8E-51 T 14-10-2018 IPR035906 MetI-like superfamily CF65_00699 ae6458f8df4905156976f85d9a6cbf02 685 SUPERFAMILY SSF161098 144 390 8.5E-44 T 14-10-2018 IPR035906 MetI-like superfamily CF65_00699 ae6458f8df4905156976f85d9a6cbf02 685 SUPERFAMILY SSF161098 430 667 5.56E-42 T 14-10-2018 IPR035906 MetI-like superfamily CF65_00699 ae6458f8df4905156976f85d9a6cbf02 685 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 203 392 5.1E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_00699 ae6458f8df4905156976f85d9a6cbf02 685 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 493 671 1.2E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_02747 8aa16aa7771977ffad246fae00834535 285 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 284 43.21 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CF65_02747 8aa16aa7771977ffad246fae00834535 285 Gene3D G3DSA:3.40.50.2020 117 260 2.9E-125 T 14-10-2018 CF65_02747 8aa16aa7771977ffad246fae00834535 285 SMART SM01400 1 90 4.0E-51 T 14-10-2018 CF65_02747 8aa16aa7771977ffad246fae00834535 285 Pfam PF14572 Phosphoribosyl synthetase-associated domain 174 283 1.8E-30 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CF65_02747 8aa16aa7771977ffad246fae00834535 285 Gene3D G3DSA:3.40.50.2020 1 272 2.9E-125 T 14-10-2018 CF65_02747 8aa16aa7771977ffad246fae00834535 285 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 2 284 1.3E-115 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CF65_02747 8aa16aa7771977ffad246fae00834535 285 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 98 113 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CF65_02747 8aa16aa7771977ffad246fae00834535 285 SUPERFAMILY SSF53271 38 276 2.56E-65 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like CF65_02747 8aa16aa7771977ffad246fae00834535 285 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 90 3.0E-40 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CF65_01594 4eee6d3dae3c5fc2641ed162c98d180f 502 Pfam PF01564 Spermine/spermidine synthase domain 280 410 6.5E-8 T 14-10-2018 CF65_01594 4eee6d3dae3c5fc2641ed162c98d180f 502 SUPERFAMILY SSF53335 264 419 6.61E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01594 4eee6d3dae3c5fc2641ed162c98d180f 502 Gene3D G3DSA:3.40.50.150 272 462 2.7E-29 T 14-10-2018 CF65_00139 b9c5460afa6f31f66634b488576c51eb 453 Pfam PF01523 Putative modulator of DNA gyrase 38 329 7.5E-57 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CF65_00139 b9c5460afa6f31f66634b488576c51eb 453 SUPERFAMILY SSF111283 18 453 3.4E-121 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 CF65_00139 b9c5460afa6f31f66634b488576c51eb 453 Gene3D G3DSA:3.30.2290.10 13 238 2.1E-79 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal CF65_02317 f88c40f877578bae42f2456ab389aef7 261 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 258 32.596 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 CF65_02317 f88c40f877578bae42f2456ab389aef7 261 SUPERFAMILY SSF52540 48 129 2.45E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02317 f88c40f877578bae42f2456ab389aef7 261 Gene3D G3DSA:3.40.50.300 19 143 1.8E-5 T 14-10-2018 CF65_02317 f88c40f877578bae42f2456ab389aef7 261 PIRSF PIRSF005052 1 261 1.3E-96 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 CF65_02317 f88c40f877578bae42f2456ab389aef7 261 Pfam PF03668 P-loop ATPase protein family 1 258 6.1E-118 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 CF65_00778 cc5771fdd00861ff728d41d40997ba26 102 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 22.418 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 CF65_00778 cc5771fdd00861ff728d41d40997ba26 102 PIRSF PIRSF003196 1 100 1.5E-38 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 CF65_00778 cc5771fdd00861ff728d41d40997ba26 102 TIGRFAM TIGR01321 TrpR: trp operon repressor 1 95 4.3E-38 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 CF65_00778 cc5771fdd00861ff728d41d40997ba26 102 Pfam PF01371 Trp repressor protein 8 94 4.3E-31 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 CF65_00778 cc5771fdd00861ff728d41d40997ba26 102 Gene3D G3DSA:1.10.1270.10 2 99 6.1E-32 T 14-10-2018 IPR038116 TrpR-like superfamily CF65_00778 cc5771fdd00861ff728d41d40997ba26 102 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 8 92 9.0E-34 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 CF65_00778 cc5771fdd00861ff728d41d40997ba26 102 SUPERFAMILY SSF48295 1 95 6.8E-28 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CF65_01972 d38462121043feb0523b76e0069349a7 711 Pfam PF01515 Phosphate acetyl/butaryl transferase 393 706 7.0E-126 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CF65_01972 d38462121043feb0523b76e0069349a7 711 Gene3D G3DSA:3.40.50.10950 398 709 8.0E-135 T 14-10-2018 CF65_01972 d38462121043feb0523b76e0069349a7 711 Pfam PF13500 AAA domain 3 229 2.3E-49 T 14-10-2018 CF65_01972 d38462121043feb0523b76e0069349a7 711 SUPERFAMILY SSF53659 394 709 4.93E-93 T 14-10-2018 CF65_01972 d38462121043feb0523b76e0069349a7 711 SUPERFAMILY SSF52540 1 240 4.96E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01972 d38462121043feb0523b76e0069349a7 711 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 1.0E-139 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CF65_01972 d38462121043feb0523b76e0069349a7 711 Gene3D G3DSA:3.40.50.300 8 221 5.1E-17 T 14-10-2018 CF65_01972 d38462121043feb0523b76e0069349a7 711 Gene3D G3DSA:3.40.1390.20 224 364 4.1E-14 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CF65_01972 d38462121043feb0523b76e0069349a7 711 SUPERFAMILY SSF75138 229 353 3.73E-22 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CF65_01972 d38462121043feb0523b76e0069349a7 711 Gene3D G3DSA:3.40.50.10750 529 682 8.0E-135 T 14-10-2018 CF65_01972 d38462121043feb0523b76e0069349a7 711 Pfam PF07085 DRTGG domain 233 344 7.2E-27 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CF65_01972 d38462121043feb0523b76e0069349a7 711 PIRSF PIRSF006107 1 711 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CF65_00812 0e57c2cedca2030471eaf494ac061232 232 Gene3D G3DSA:3.40.50.620 5 227 1.1E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00812 0e57c2cedca2030471eaf494ac061232 232 Pfam PF06508 Queuosine biosynthesis protein QueC 7 214 7.1E-79 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CF65_00812 0e57c2cedca2030471eaf494ac061232 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 8 207 5.6E-81 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CF65_00812 0e57c2cedca2030471eaf494ac061232 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 6 220 49.251 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CF65_00812 0e57c2cedca2030471eaf494ac061232 232 SUPERFAMILY SSF52402 6 217 2.09E-62 T 14-10-2018 CF65_00812 0e57c2cedca2030471eaf494ac061232 232 PIRSF PIRSF006293 4 226 1.4E-75 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CF65_00547 1f87eeeea41b6d346fb9606bf111b17a 149 Gene3D G3DSA:1.10.1130.10 62 129 1.8E-29 T 14-10-2018 CF65_00547 1f87eeeea41b6d346fb9606bf111b17a 149 PIRSF PIRSF006105 3 149 1.4E-49 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CF65_00547 1f87eeeea41b6d346fb9606bf111b17a 149 SUPERFAMILY SSF48695 40 147 4.94E-40 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily CF65_00547 1f87eeeea41b6d346fb9606bf111b17a 149 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 38 143 4.4E-40 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CF65_01305 00674864a513b7bdadf7a2913e6dc18c 281 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 279 4.6E-108 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CF65_01305 00674864a513b7bdadf7a2913e6dc18c 281 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 267 40.508 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CF65_01305 00674864a513b7bdadf7a2913e6dc18c 281 SUPERFAMILY SSF53335 9 280 5.01E-97 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01305 00674864a513b7bdadf7a2913e6dc18c 281 Gene3D G3DSA:3.40.50.150 1 281 1.4E-116 T 14-10-2018 CF65_01340 ea622edd7e9f4d4320264d90e3401a7f 398 Gene3D G3DSA:1.10.287.470 115 174 5.9E-58 T 14-10-2018 CF65_01340 ea622edd7e9f4d4320264d90e3401a7f 398 Gene3D G3DSA:2.40.50.100 80 208 5.9E-58 T 14-10-2018 CF65_01340 ea622edd7e9f4d4320264d90e3401a7f 398 Gene3D G3DSA:2.40.420.20 293 378 5.9E-58 T 14-10-2018 CF65_01340 ea622edd7e9f4d4320264d90e3401a7f 398 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 381 4.3E-63 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CF65_01340 ea622edd7e9f4d4320264d90e3401a7f 398 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 281 2.1E-22 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CF65_01340 ea622edd7e9f4d4320264d90e3401a7f 398 Gene3D G3DSA:2.40.30.170 70 292 5.9E-58 T 14-10-2018 CF65_01340 ea622edd7e9f4d4320264d90e3401a7f 398 SUPERFAMILY SSF111369 70 286 2.09E-34 T 14-10-2018 CF65_02591 3e1c9d81272bdbdfc6938df00ace605e 308 ProSitePatterns PS01270 Band 7 protein family signature. 138 166 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site CF65_02591 3e1c9d81272bdbdfc6938df00ace605e 308 Pfam PF16200 C-terminal region of band_7 243 303 1.5E-8 T 14-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 CF65_02591 3e1c9d81272bdbdfc6938df00ace605e 308 SMART SM00244 24 182 6.4E-58 T 14-10-2018 IPR001107 Band 7 domain CF65_02591 3e1c9d81272bdbdfc6938df00ace605e 308 SUPERFAMILY SSF117892 55 189 1.96E-41 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily CF65_02591 3e1c9d81272bdbdfc6938df00ace605e 308 PRINTS PR00721 Stomatin signature 134 157 3.4E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 CF65_02591 3e1c9d81272bdbdfc6938df00ace605e 308 PRINTS PR00721 Stomatin signature 114 131 3.4E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 CF65_02591 3e1c9d81272bdbdfc6938df00ace605e 308 PRINTS PR00721 Stomatin signature 158 176 3.4E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 CF65_02591 3e1c9d81272bdbdfc6938df00ace605e 308 PRINTS PR00721 Stomatin signature 79 100 3.4E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 CF65_02591 3e1c9d81272bdbdfc6938df00ace605e 308 PRINTS PR00721 Stomatin signature 177 198 3.4E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 CF65_02591 3e1c9d81272bdbdfc6938df00ace605e 308 Pfam PF01145 SPFH domain / Band 7 family 28 209 1.3E-33 T 14-10-2018 IPR001107 Band 7 domain CF65_02591 3e1c9d81272bdbdfc6938df00ace605e 308 Gene3D G3DSA:3.30.479.30 52 184 3.8E-43 T 14-10-2018 CF65_01808 29dea70408855cbeac150499a6e4ecdf 650 Gene3D G3DSA:1.10.1060.10 370 444 1.9E-12 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CF65_01808 29dea70408855cbeac150499a6e4ecdf 650 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 650 223.387 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CF65_01808 29dea70408855cbeac150499a6e4ecdf 650 SUPERFAMILY SSF142019 95 304 6.67E-60 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_01808 29dea70408855cbeac150499a6e4ecdf 650 Gene3D G3DSA:3.40.50.11540 145 271 4.7E-15 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_01808 29dea70408855cbeac150499a6e4ecdf 650 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_01808 29dea70408855cbeac150499a6e4ecdf 650 Pfam PF10531 SLBB domain 297 345 7.2E-7 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_01808 29dea70408855cbeac150499a6e4ecdf 650 SUPERFAMILY SSF46548 336 446 2.79E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CF65_01808 29dea70408855cbeac150499a6e4ecdf 650 Pfam PF12838 4Fe-4S dicluster domain 378 430 6.7E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_01808 29dea70408855cbeac150499a6e4ecdf 650 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 284 2.3E-47 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_01808 29dea70408855cbeac150499a6e4ecdf 650 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 2.7E-32 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain CF65_01808 29dea70408855cbeac150499a6e4ecdf 650 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 9.2E-188 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CF65_02460 cc10ba239f83136108f41be62e45db0d 140 Pfam PF03061 Thioesterase superfamily 51 128 5.9E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CF65_02460 cc10ba239f83136108f41be62e45db0d 140 Gene3D G3DSA:3.10.129.10 1 140 7.7E-56 T 14-10-2018 CF65_02460 cc10ba239f83136108f41be62e45db0d 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 135 7.6E-43 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CF65_02460 cc10ba239f83136108f41be62e45db0d 140 SUPERFAMILY SSF54637 4 137 5.14E-32 T 14-10-2018 IPR029069 HotDog domain superfamily CF65_01276 1c3825ccec93633496055a7003ee8aa7 345 Gene3D G3DSA:3.40.50.2000 165 338 1.7E-20 T 14-10-2018 CF65_01276 1c3825ccec93633496055a7003ee8aa7 345 SUPERFAMILY SSF53756 2 331 2.9E-68 T 14-10-2018 CF65_01276 1c3825ccec93633496055a7003ee8aa7 345 Gene3D G3DSA:3.40.50.2000 1 147 7.9E-26 T 14-10-2018 CF65_01276 1c3825ccec93633496055a7003ee8aa7 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 308 4.2E-13 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 CF65_00076 b7d2ca716c3bf5f51bdda2981d620f6c 117 Gene3D G3DSA:3.30.1130.10 1 117 1.2E-38 T 14-10-2018 CF65_00076 b7d2ca716c3bf5f51bdda2981d620f6c 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 5 115 1.1E-32 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CF65_00076 b7d2ca716c3bf5f51bdda2981d620f6c 117 SMART SM00905 5 115 8.3E-46 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CF65_00076 b7d2ca716c3bf5f51bdda2981d620f6c 117 Pfam PF02152 Dihydroneopterin aldolase 5 113 5.0E-31 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CF65_00076 b7d2ca716c3bf5f51bdda2981d620f6c 117 TIGRFAM TIGR00526 folB_dom: FolB domain 3 117 1.3E-33 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CF65_00076 b7d2ca716c3bf5f51bdda2981d620f6c 117 SUPERFAMILY SSF55620 1 117 1.33E-35 T 14-10-2018 CF65_00283 60b1304853457a05ede8604bec9fb063 134 SUPERFAMILY SSF88697 43 133 1.99E-22 T 14-10-2018 IPR015947 PUA-like superfamily CF65_00283 60b1304853457a05ede8604bec9fb063 134 SMART SM00359 43 126 1.7E-17 T 14-10-2018 IPR002478 PUA domain GO:0003723 CF65_00283 60b1304853457a05ede8604bec9fb063 134 Pfam PF01472 PUA domain 43 115 5.2E-18 T 14-10-2018 IPR002478 PUA domain GO:0003723 CF65_00283 60b1304853457a05ede8604bec9fb063 134 Gene3D G3DSA:2.30.130.10 33 134 9.6E-29 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 CF65_01446 2173df4a48b09fca82e988f9f1e9c1f6 32 SUPERFAMILY SSF140931 13 31 8.76E-6 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_01446 2173df4a48b09fca82e988f9f1e9c1f6 32 Gene3D G3DSA:1.10.3290.10 1 32 2.8E-6 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_01446 2173df4a48b09fca82e988f9f1e9c1f6 32 Pfam PF02661 Fic/DOC family 3 31 2.6E-5 T 14-10-2018 IPR003812 Fido domain CF65_00976 cfd0bea2d033e6bac1485540b0282e41 331 Gene3D G3DSA:1.10.10.800 167 258 5.7E-89 T 14-10-2018 CF65_00976 cfd0bea2d033e6bac1485540b0282e41 331 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 37 219 1.3E-11 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 CF65_00976 cfd0bea2d033e6bac1485540b0282e41 331 Gene3D G3DSA:3.40.50.1820 32 313 5.7E-89 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_00976 cfd0bea2d033e6bac1485540b0282e41 331 SUPERFAMILY SSF53474 25 331 6.37E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_01388 881d04843c7dc43efd9298cddbfda8d8 125 SUPERFAMILY SSF54995 1 103 2.88E-37 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01388 881d04843c7dc43efd9298cddbfda8d8 125 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 CF65_01388 881d04843c7dc43efd9298cddbfda8d8 125 Pfam PF01250 Ribosomal protein S6 3 90 5.3E-28 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01388 881d04843c7dc43efd9298cddbfda8d8 125 Gene3D G3DSA:3.30.70.60 1 92 4.1E-32 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CF65_01388 881d04843c7dc43efd9298cddbfda8d8 125 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 3.8E-39 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01388 881d04843c7dc43efd9298cddbfda8d8 125 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.03 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CF65_01544 bf7c537618d625c5c8d501e5f0824ca2 363 SMART SM00028 94 127 0.0066 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CF65_01544 bf7c537618d625c5c8d501e5f0824ca2 363 SUPERFAMILY SSF48452 75 231 1.52E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_01544 bf7c537618d625c5c8d501e5f0824ca2 363 Pfam PF02698 DUF218 domain 193 309 7.8E-20 T 14-10-2018 IPR003848 Domain of unknown function DUF218 CF65_01544 bf7c537618d625c5c8d501e5f0824ca2 363 Gene3D G3DSA:1.25.40.10 28 185 1.8E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_02514 a8b12be07634b95cfb0777f38fbfb6a1 266 SUPERFAMILY SSF53474 17 258 8.82E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_02514 a8b12be07634b95cfb0777f38fbfb6a1 266 Gene3D G3DSA:3.40.50.1820 5 258 1.6E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_02514 a8b12be07634b95cfb0777f38fbfb6a1 266 Pfam PF00561 alpha/beta hydrolase fold 19 245 2.6E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CF65_02468 43c927d333fe8e07b82db4720f9be024 289 Gene3D G3DSA:3.40.50.10490 102 285 2.7E-45 T 14-10-2018 CF65_02468 43c927d333fe8e07b82db4720f9be024 289 SUPERFAMILY SSF53697 99 277 1.67E-42 T 14-10-2018 CF65_02468 43c927d333fe8e07b82db4720f9be024 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 80 1.2E-24 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CF65_02468 43c927d333fe8e07b82db4720f9be024 289 Gene3D G3DSA:1.10.10.10 2 83 4.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02468 43c927d333fe8e07b82db4720f9be024 289 Pfam PF01380 SIS domain 134 259 2.1E-21 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CF65_02468 43c927d333fe8e07b82db4720f9be024 289 SUPERFAMILY SSF46689 6 79 1.74E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01515 8b9a497e1d4cb0a22a7b5ea1ce18d560 91 Hamap MF_00715 Protein SlyX [slyX]. 24 91 17.452 T 14-10-2018 IPR007236 SlyX CF65_01515 8b9a497e1d4cb0a22a7b5ea1ce18d560 91 Pfam PF04102 SlyX 26 91 1.4E-24 T 14-10-2018 IPR007236 SlyX CF65_01515 8b9a497e1d4cb0a22a7b5ea1ce18d560 91 Gene3D G3DSA:1.20.5.300 16 59 4.4E-5 T 14-10-2018 CF65_00805 395860a41e31237ead80955c46e31c6d 256 Pfam PF13183 4Fe-4S dicluster domain 157 230 1.6E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_00805 395860a41e31237ead80955c46e31c6d 256 Gene3D G3DSA:3.10.20.30 5 106 3.0E-34 T 14-10-2018 IPR012675 Beta-grasp domain superfamily CF65_00805 395860a41e31237ead80955c46e31c6d 256 SUPERFAMILY SSF54292 6 106 6.91E-30 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CF65_00805 395860a41e31237ead80955c46e31c6d 256 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 8.7E-32 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00805 395860a41e31237ead80955c46e31c6d 256 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 160 171 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_00805 395860a41e31237ead80955c46e31c6d 256 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 240 1.9E-95 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00805 395860a41e31237ead80955c46e31c6d 256 Gene3D G3DSA:1.10.1060.10 107 255 1.2E-47 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CF65_00805 395860a41e31237ead80955c46e31c6d 256 SUPERFAMILY SSF46548 108 240 4.88E-28 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CF65_00805 395860a41e31237ead80955c46e31c6d 256 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CF65_00871 79364ff4232319c190973e9d3fc867e8 460 PRINTS PR00811 Bacterial general secretion pathway protein D signature 400 414 1.0E-14 T 14-10-2018 IPR001775 GspD/PilQ family CF65_00871 79364ff4232319c190973e9d3fc867e8 460 PRINTS PR00811 Bacterial general secretion pathway protein D signature 191 201 1.0E-14 T 14-10-2018 IPR001775 GspD/PilQ family CF65_00871 79364ff4232319c190973e9d3fc867e8 460 PRINTS PR00811 Bacterial general secretion pathway protein D signature 249 273 1.0E-14 T 14-10-2018 IPR001775 GspD/PilQ family CF65_00871 79364ff4232319c190973e9d3fc867e8 460 PRINTS PR00811 Bacterial general secretion pathway protein D signature 377 395 1.0E-14 T 14-10-2018 IPR001775 GspD/PilQ family CF65_00871 79364ff4232319c190973e9d3fc867e8 460 Pfam PF13629 Pilus formation protein N terminal region 29 98 2.7E-17 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal CF65_00871 79364ff4232319c190973e9d3fc867e8 460 Pfam PF00263 Bacterial type II and III secretion system protein 253 413 4.5E-40 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 CF65_00844 dcc0dd09871f5b8f8d37e6cb197ba870 554 Pfam PF03717 Penicillin-binding Protein dimerisation domain 39 189 2.7E-19 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CF65_00844 dcc0dd09871f5b8f8d37e6cb197ba870 554 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 1 535 40.836 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CF65_00844 dcc0dd09871f5b8f8d37e6cb197ba870 554 SUPERFAMILY SSF56601 203 528 1.36E-81 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CF65_00844 dcc0dd09871f5b8f8d37e6cb197ba870 554 SUPERFAMILY SSF56519 31 202 1.44E-43 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CF65_00844 dcc0dd09871f5b8f8d37e6cb197ba870 554 Gene3D G3DSA:3.90.1310.30 27 203 1.3E-41 T 14-10-2018 CF65_00844 dcc0dd09871f5b8f8d37e6cb197ba870 554 Gene3D G3DSA:3.40.710.10 264 445 2.9E-97 T 14-10-2018 CF65_00844 dcc0dd09871f5b8f8d37e6cb197ba870 554 Pfam PF00905 Penicillin binding protein transpeptidase domain 228 519 4.3E-75 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CF65_00844 dcc0dd09871f5b8f8d37e6cb197ba870 554 Gene3D G3DSA:3.30.450.330 205 515 2.9E-97 T 14-10-2018 CF65_02337 3e68b0e2b2b66f540a146a59e838d841 222 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 222 140.562 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 CF65_02337 3e68b0e2b2b66f540a146a59e838d841 222 Pfam PF02976 DNA mismatch repair enzyme MutH 51 149 2.1E-34 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CF65_02337 3e68b0e2b2b66f540a146a59e838d841 222 SMART SM00927 51 149 1.2E-64 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CF65_02337 3e68b0e2b2b66f540a146a59e838d841 222 SUPERFAMILY SSF52980 2 218 1.23E-80 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CF65_02337 3e68b0e2b2b66f540a146a59e838d841 222 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 2 217 4.9E-110 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 CF65_02337 3e68b0e2b2b66f540a146a59e838d841 222 Gene3D G3DSA:3.40.600.10 1 221 2.3E-50 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 CF65_02502 d25f7aee232c3267ed32ab0d5f887064 203 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 32 199 1.0E-70 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CF65_02502 d25f7aee232c3267ed32ab0d5f887064 203 SUPERFAMILY SSF53271 35 200 2.98E-50 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like CF65_02502 d25f7aee232c3267ed32ab0d5f887064 203 Pfam PF00156 Phosphoribosyl transferase domain 52 175 1.9E-14 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CF65_02502 d25f7aee232c3267ed32ab0d5f887064 203 Gene3D G3DSA:3.40.50.2020 18 203 6.7E-65 T 14-10-2018 CF65_02502 d25f7aee232c3267ed32ab0d5f887064 203 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 31 200 37.149 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CF65_01081 ac102a601278b0042ae5bdece59d086b 102 Pfam PF10818 Protein of unknown function (DUF2547) 8 102 3.7E-29 T 14-10-2018 IPR020508 Protein of unknown function DUF2547 CF65_01081 ac102a601278b0042ae5bdece59d086b 102 ProDom PD067723 PM1220 PRECURSOR HI0908 SIGNAL 1 102 8.0E-11 T 14-10-2018 IPR020508 Protein of unknown function DUF2547 CF65_02217 a25153aa3db984d935b1ea3f6a4dba15 207 SUPERFAMILY SSF51569 1 190 4.03E-50 T 14-10-2018 CF65_02217 a25153aa3db984d935b1ea3f6a4dba15 207 Gene3D G3DSA:3.20.20.70 1 206 3.3E-66 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02217 a25153aa3db984d935b1ea3f6a4dba15 207 SMART SM01133 2 174 6.9E-9 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CF65_02217 a25153aa3db984d935b1ea3f6a4dba15 207 Pfam PF01791 DeoC/LacD family aldolase 20 173 1.3E-17 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CF65_02775 32594833ec8b6b0bc3bcccbeb9d2fc81 363 SUPERFAMILY SSF111337 1 353 3.92E-134 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CF65_02775 32594833ec8b6b0bc3bcccbeb9d2fc81 363 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 354 46.773 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CF65_02775 32594833ec8b6b0bc3bcccbeb9d2fc81 363 Pfam PF02547 Queuosine biosynthesis protein 4 353 7.9E-130 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CF65_02775 32594833ec8b6b0bc3bcccbeb9d2fc81 363 Gene3D G3DSA:3.40.1780.10 14 353 3.8E-114 T 14-10-2018 CF65_02775 32594833ec8b6b0bc3bcccbeb9d2fc81 363 Gene3D G3DSA:2.40.10.240 64 169 3.8E-114 T 14-10-2018 CF65_02775 32594833ec8b6b0bc3bcccbeb9d2fc81 363 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 353 2.5E-162 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CF65_00839 52617a369591bc04bd58fe64084b91e7 284 ProSitePatterns PS01348 MraY family signature 2. 112 123 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00839 52617a369591bc04bd58fe64084b91e7 284 Pfam PF00953 Glycosyl transferase family 4 23 207 5.1E-35 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CF65_00839 52617a369591bc04bd58fe64084b91e7 284 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 1 284 6.2E-133 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_00839 52617a369591bc04bd58fe64084b91e7 284 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 1 282 18.694 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_02581 7c10facebe3484002cace2c63143b267 126 Pfam PF02657 Fe-S metabolism associated domain 6 119 6.7E-35 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CF65_02581 7c10facebe3484002cace2c63143b267 126 Gene3D G3DSA:3.90.1010.10 1 125 4.3E-33 T 14-10-2018 CF65_02581 7c10facebe3484002cace2c63143b267 126 SUPERFAMILY SSF82649 3 123 5.13E-37 T 14-10-2018 CF65_00161 c7efed8841379dab47e69e8389708518 469 Gene3D G3DSA:3.30.450.90 94 228 5.3E-40 T 14-10-2018 CF65_00161 c7efed8841379dab47e69e8389708518 469 SUPERFAMILY SSF52540 118 463 5.55E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00161 c7efed8841379dab47e69e8389708518 469 Pfam PF00437 Type II/IV secretion system protein 132 396 7.9E-82 T 14-10-2018 IPR001482 Type II/IV secretion system protein CF65_00161 c7efed8841379dab47e69e8389708518 469 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 324 338 - T 14-10-2018 IPR001482 Type II/IV secretion system protein CF65_00161 c7efed8841379dab47e69e8389708518 469 Gene3D G3DSA:3.40.50.300 231 468 4.4E-83 T 14-10-2018 CF65_00161 c7efed8841379dab47e69e8389708518 469 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 31 93 1.2E-6 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal CF65_00161 c7efed8841379dab47e69e8389708518 469 SUPERFAMILY SSF160246 22 90 2.25E-7 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CF65_01085 e1e85d40a12492fdc0235652c354ee9d 134 TIGRFAM TIGR00586 mutt: mutator mutT protein 6 129 8.3E-58 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CF65_01085 e1e85d40a12492fdc0235652c354ee9d 134 SUPERFAMILY SSF55811 3 129 1.11E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CF65_01085 e1e85d40a12492fdc0235652c354ee9d 134 PRINTS PR00502 NUDIX hydrolase family signature 49 64 8.1E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CF65_01085 e1e85d40a12492fdc0235652c354ee9d 134 PRINTS PR00502 NUDIX hydrolase family signature 35 49 8.1E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CF65_01085 e1e85d40a12492fdc0235652c354ee9d 134 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CF65_01085 e1e85d40a12492fdc0235652c354ee9d 134 Pfam PF00293 NUDIX domain 8 128 5.7E-20 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CF65_01085 e1e85d40a12492fdc0235652c354ee9d 134 PRINTS PR01401 Mutator MutT protein signature 79 92 9.1E-13 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CF65_01085 e1e85d40a12492fdc0235652c354ee9d 134 PRINTS PR01401 Mutator MutT protein signature 4 25 9.1E-13 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CF65_01085 e1e85d40a12492fdc0235652c354ee9d 134 Gene3D G3DSA:3.90.79.10 4 129 2.8E-33 T 14-10-2018 CF65_02416 c9209315f51bdde4fe0c979b8ee402a6 193 Gene3D G3DSA:3.40.470.10 1 192 6.7E-63 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CF65_02416 c9209315f51bdde4fe0c979b8ee402a6 193 SUPERFAMILY SSF52141 4 191 3.04E-45 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CF65_02416 c9209315f51bdde4fe0c979b8ee402a6 193 Pfam PF03167 Uracil DNA glycosylase superfamily 32 183 2.1E-15 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CF65_02416 c9209315f51bdde4fe0c979b8ee402a6 193 SMART SM00986 27 184 1.4E-18 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CF65_02416 c9209315f51bdde4fe0c979b8ee402a6 193 SMART SM00987 27 184 1.4E-18 T 14-10-2018 CF65_01164 e5e9f1b83af7d9e85fa3c6ff46c3b760 693 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 33 644 1.2E-273 T 14-10-2018 IPR004814 Oligopeptide transporter OPT CF65_01164 e5e9f1b83af7d9e85fa3c6ff46c3b760 693 Pfam PF03169 OPT oligopeptide transporter protein 33 642 5.3E-105 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 CF65_01164 e5e9f1b83af7d9e85fa3c6ff46c3b760 693 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 30 644 1.2E-136 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 CF65_01259 4b5fd4654d10924837eb72d2e8e979cb 170 Gene3D G3DSA:3.40.50.360 2 121 1.9E-12 T 14-10-2018 IPR029039 Flavoprotein-like superfamily CF65_01259 4b5fd4654d10924837eb72d2e8e979cb 170 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CF65_01259 4b5fd4654d10924837eb72d2e8e979cb 170 Pfam PF12724 Flavodoxin domain 4 146 5.8E-46 T 14-10-2018 IPR026816 Flavodoxin domain CF65_01259 4b5fd4654d10924837eb72d2e8e979cb 170 SUPERFAMILY SSF52218 1 166 4.89E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily CF65_00561 8406449bc3bce5499e1394593354b132 211 SUPERFAMILY SSF159894 7 106 2.33E-19 T 14-10-2018 CF65_00561 8406449bc3bce5499e1394593354b132 211 Pfam PF04993 TfoX N-terminal domain 15 106 1.7E-20 T 14-10-2018 IPR007076 TfoX, N-terminal CF65_00561 8406449bc3bce5499e1394593354b132 211 Pfam PF04994 TfoX C-terminal domain 118 196 2.8E-22 T 14-10-2018 IPR007077 TfoX, C-terminal CF65_00561 8406449bc3bce5499e1394593354b132 211 Gene3D G3DSA:3.30.1460.30 4 108 2.8E-16 T 14-10-2018 CF65_00561 8406449bc3bce5499e1394593354b132 211 PIRSF PIRSF028788 2 211 4.5E-59 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type CF65_00561 8406449bc3bce5499e1394593354b132 211 Gene3D G3DSA:1.10.150.20 117 200 4.7E-11 T 14-10-2018 CF65_02956 afa29955337d23c956610b355f7cfba2 297 Pfam PF00589 Phage integrase family 110 283 2.9E-53 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CF65_02956 afa29955337d23c956610b355f7cfba2 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 89 2.0E-23 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CF65_02956 afa29955337d23c956610b355f7cfba2 297 SUPERFAMILY SSF56349 4 288 1.35E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CF65_02956 afa29955337d23c956610b355f7cfba2 297 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 3 297 59.058 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CF65_02956 afa29955337d23c956610b355f7cfba2 297 Gene3D G3DSA:1.10.443.10 110 291 1.4E-70 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CF65_02956 afa29955337d23c956610b355f7cfba2 297 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 296 1.0E-114 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CF65_02956 afa29955337d23c956610b355f7cfba2 297 Gene3D G3DSA:1.10.150.130 3 98 8.0E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal CF65_02956 afa29955337d23c956610b355f7cfba2 297 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 297 55.525 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 185 488 1.9E-120 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 SUPERFAMILY SSF53187 179 493 4.71E-121 T 14-10-2018 CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 18 146 6.0E-32 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 2 496 39.236 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 1.2E-53 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 1.2E-53 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 1.2E-53 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 1.2E-53 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 1.2E-53 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 Gene3D G3DSA:3.40.220.10 1 158 9.4E-46 T 14-10-2018 CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 SUPERFAMILY SSF52949 1 183 9.42E-45 T 14-10-2018 CF65_01778 9441b3192e350c4b4dd2ee9368d661ec 496 Gene3D G3DSA:3.40.630.10 180 496 1.2E-134 T 14-10-2018 CF65_02842 6af33c3d620d8b7532aaf87bcb6f263d 103 ProDom PD065628 PM0975 PRECURSOR HI0310 SIGNAL 4 99 3.0E-24 T 14-10-2018 IPR020493 Uncharacterised protein family HI0310 CF65_02842 6af33c3d620d8b7532aaf87bcb6f263d 103 Pfam PF17274 Family of unknown function (DUF5339) 34 102 1.1E-24 T 14-10-2018 IPR020493 Uncharacterised protein family HI0310 CF65_01015 e1a71f978e66b3246ce4d51c8590574a 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.8E-54 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CF65_01015 e1a71f978e66b3246ce4d51c8590574a 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 3.0E-45 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CF65_01015 e1a71f978e66b3246ce4d51c8590574a 105 SUPERFAMILY SSF47598 3 105 1.69E-55 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 CF65_01015 e1a71f978e66b3246ce4d51c8590574a 105 Hamap MF_00744 Met repressor [metJ]. 1 105 37.129 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CF65_01015 e1a71f978e66b3246ce4d51c8590574a 105 Gene3D G3DSA:1.10.140.10 2 105 7.7E-60 T 14-10-2018 IPR023453 Methionine repressor MetJ domain superfamily CF65_01692 7d5c92f113ad5c459d91a517f7067575 224 SUPERFAMILY SSF51366 1 224 7.59E-36 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CF65_01692 7d5c92f113ad5c459d91a517f7067575 224 Gene3D G3DSA:3.20.20.70 1 224 4.7E-70 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_01692 7d5c92f113ad5c459d91a517f7067575 224 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 211 3.0E-25 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CF65_01692 7d5c92f113ad5c459d91a517f7067575 224 SMART SM00934 5 216 4.6E-27 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CF65_02902 053eba94b0da3c537a7422928a15747f 235 SUPERFAMILY SSF52172 2 135 1.32E-37 T 14-10-2018 IPR011006 CheY-like superfamily CF65_02902 053eba94b0da3c537a7422928a15747f 235 Gene3D G3DSA:3.40.50.2300 1 121 6.6E-34 T 14-10-2018 CF65_02902 053eba94b0da3c537a7422928a15747f 235 SUPERFAMILY SSF46894 134 230 2.44E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CF65_02902 053eba94b0da3c537a7422928a15747f 235 SMART SM00448 4 114 7.5E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CF65_02902 053eba94b0da3c537a7422928a15747f 235 SMART SM00862 153 229 4.3E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CF65_02902 053eba94b0da3c537a7422928a15747f 235 Gene3D G3DSA:1.10.10.10 122 232 1.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02902 053eba94b0da3c537a7422928a15747f 235 Pfam PF00072 Response regulator receiver domain 6 113 1.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CF65_02902 053eba94b0da3c537a7422928a15747f 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 1.6E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 331 41.113 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 Gene3D G3DSA:3.40.190.80 198 335 3.2E-58 T 14-10-2018 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 149 172 2.3E-62 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 2.3E-62 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 180 203 2.3E-62 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 2.3E-62 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 206 233 2.3E-62 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 305 330 2.3E-62 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 PIRSF PIRSF000904 1 335 8.0E-122 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 271 283 - T 14-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 PIRSF PIRSF500210 1 334 7.3E-126 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 Gene3D G3DSA:3.30.540.10 1 196 9.0E-70 T 14-10-2018 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 195 1.4E-75 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CF65_02930 d7dd30bd6832d881cffad47ae0f36bec 335 SUPERFAMILY SSF56655 2 329 4.23E-105 T 14-10-2018 CF65_02417 804de8875a95915462b2f7827d17bed6 363 SUPERFAMILY SSF52540 3 301 2.54E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02417 804de8875a95915462b2f7827d17bed6 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.6E-40 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 CF65_02417 804de8875a95915462b2f7827d17bed6 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.077 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CF65_02417 804de8875a95915462b2f7827d17bed6 363 PIRSF PIRSF006641 1 363 1.1E-160 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CF65_02417 804de8875a95915462b2f7827d17bed6 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.0E-175 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CF65_02417 804de8875a95915462b2f7827d17bed6 363 Gene3D G3DSA:1.10.150.300 120 200 1.2E-154 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 CF65_02417 804de8875a95915462b2f7827d17bed6 363 SUPERFAMILY SSF81271 279 360 6.54E-37 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CF65_02417 804de8875a95915462b2f7827d17bed6 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.1E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_02417 804de8875a95915462b2f7827d17bed6 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.1E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_02417 804de8875a95915462b2f7827d17bed6 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.1E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_02417 804de8875a95915462b2f7827d17bed6 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.1E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_02417 804de8875a95915462b2f7827d17bed6 363 Gene3D G3DSA:3.40.50.300 4 278 1.2E-154 T 14-10-2018 CF65_02417 804de8875a95915462b2f7827d17bed6 363 Gene3D G3DSA:3.10.20.30 48 362 1.2E-154 T 14-10-2018 IPR012675 Beta-grasp domain superfamily CF65_02417 804de8875a95915462b2f7827d17bed6 363 Pfam PF01926 50S ribosome-binding GTPase 5 124 2.1E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_00040 6b0920a7fc22b2b20c793ff1bf6c842d 176 SUPERFAMILY SSF52833 9 164 1.17E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_00040 6b0920a7fc22b2b20c793ff1bf6c842d 176 Gene3D G3DSA:3.40.30.10 23 175 3.6E-35 T 14-10-2018 CF65_00040 6b0920a7fc22b2b20c793ff1bf6c842d 176 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 171 2.6E-65 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 CF65_00040 6b0920a7fc22b2b20c793ff1bf6c842d 176 ProSitePatterns PS00194 Thioredoxin family active site. 67 85 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CF65_00040 6b0920a7fc22b2b20c793ff1bf6c842d 176 Pfam PF08534 Redoxin 39 155 8.3E-13 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CF65_00273 0be63baa317e47c970bddad970d232f6 339 Pfam PF02504 Fatty acid synthesis protein 5 330 1.2E-94 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CF65_00273 0be63baa317e47c970bddad970d232f6 339 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 337 6.5E-101 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CF65_00273 0be63baa317e47c970bddad970d232f6 339 Gene3D G3DSA:3.40.718.10 3 339 3.0E-109 T 14-10-2018 CF65_00273 0be63baa317e47c970bddad970d232f6 339 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 339 120.605 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CF65_00273 0be63baa317e47c970bddad970d232f6 339 PIRSF PIRSF002465 2 339 9.2E-114 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CF65_00273 0be63baa317e47c970bddad970d232f6 339 SUPERFAMILY SSF53659 4 337 1.73E-92 T 14-10-2018 CF65_00696 c8c6f84ec477a9fb65982a9073cfd233 346 SUPERFAMILY SSF53850 27 338 3.36E-69 T 14-10-2018 CF65_00696 c8c6f84ec477a9fb65982a9073cfd233 346 PIRSF PIRSF002825 1 343 9.5E-67 T 14-10-2018 IPR026045 Ferric binding protein CF65_00696 c8c6f84ec477a9fb65982a9073cfd233 346 Gene3D G3DSA:3.40.190.10 135 324 9.6E-120 T 14-10-2018 CF65_00696 c8c6f84ec477a9fb65982a9073cfd233 346 Pfam PF13343 Bacterial extracellular solute-binding protein 77 322 4.0E-33 T 14-10-2018 CF65_00696 c8c6f84ec477a9fb65982a9073cfd233 346 Gene3D G3DSA:3.40.190.10 33 309 9.6E-120 T 14-10-2018 CF65_01347 1a115bb9e04e05c00a5706134057e874 97 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 3.1E-26 T 14-10-2018 IPR003746 Protein of unknown function DUF167 CF65_01347 1a115bb9e04e05c00a5706134057e874 97 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 9 91 1.9E-23 T 14-10-2018 IPR005228 Conserved hypothetical protein CHP00251 CF65_01347 1a115bb9e04e05c00a5706134057e874 97 Gene3D G3DSA:3.30.1200.10 1 96 4.3E-33 T 14-10-2018 IPR036591 YggU-like superfamily CF65_01347 1a115bb9e04e05c00a5706134057e874 97 SUPERFAMILY SSF69786 3 95 6.41E-32 T 14-10-2018 IPR036591 YggU-like superfamily CF65_01347 1a115bb9e04e05c00a5706134057e874 97 SMART SM01152 7 83 4.6E-37 T 14-10-2018 IPR003746 Protein of unknown function DUF167 CF65_01347 1a115bb9e04e05c00a5706134057e874 97 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 97 20.131 T 14-10-2018 IPR003746 Protein of unknown function DUF167 CF65_00423 862eb8a18ec11718e2edceb0e584b929 204 Gene3D G3DSA:3.40.50.300 3 201 4.3E-59 T 14-10-2018 CF65_00423 862eb8a18ec11718e2edceb0e584b929 204 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 27.981 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CF65_00423 862eb8a18ec11718e2edceb0e584b929 204 SUPERFAMILY SSF52540 23 199 3.61E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00423 862eb8a18ec11718e2edceb0e584b929 204 Pfam PF01926 50S ribosome-binding GTPase 30 148 1.3E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 CF65_00423 862eb8a18ec11718e2edceb0e584b929 204 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 1.2E-74 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CF65_01280 463182a4f946382d01241cb0c5dceaf1 96 SUPERFAMILY SSF50129 1 96 2.35E-29 T 14-10-2018 IPR011032 GroES-like superfamily CF65_01280 463182a4f946382d01241cb0c5dceaf1 96 PRINTS PR00297 10kDa chaperonin signature 82 95 4.2E-25 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CF65_01280 463182a4f946382d01241cb0c5dceaf1 96 PRINTS PR00297 10kDa chaperonin signature 25 46 4.2E-25 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CF65_01280 463182a4f946382d01241cb0c5dceaf1 96 PRINTS PR00297 10kDa chaperonin signature 60 72 4.2E-25 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CF65_01280 463182a4f946382d01241cb0c5dceaf1 96 PRINTS PR00297 10kDa chaperonin signature 3 18 4.2E-25 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CF65_01280 463182a4f946382d01241cb0c5dceaf1 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CF65_01280 463182a4f946382d01241cb0c5dceaf1 96 Gene3D G3DSA:2.30.33.40 1 96 3.0E-36 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 CF65_01280 463182a4f946382d01241cb0c5dceaf1 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 22.799 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CF65_01280 463182a4f946382d01241cb0c5dceaf1 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.1E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CF65_01280 463182a4f946382d01241cb0c5dceaf1 96 SMART SM00883 2 95 4.9E-45 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CF65_00529 9d5ba893cfacfb0e53f73d73ca96a58d 187 Gene3D G3DSA:2.40.160.20 21 187 2.1E-13 T 14-10-2018 CF65_00529 9d5ba893cfacfb0e53f73d73ca96a58d 187 Pfam PF13505 Outer membrane protein beta-barrel domain 8 187 4.8E-20 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel CF65_00529 9d5ba893cfacfb0e53f73d73ca96a58d 187 SUPERFAMILY SSF56925 26 187 5.23E-18 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CF65_00760 f011158f4493d9598dc6756b3115f6f1 582 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 265 544 3.9E-97 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 CF65_00760 f011158f4493d9598dc6756b3115f6f1 582 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 117 240 4.0E-46 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 CF65_00760 f011158f4493d9598dc6756b3115f6f1 582 SUPERFAMILY SSF51905 262 531 7.77E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_00760 f011158f4493d9598dc6756b3115f6f1 582 Gene3D G3DSA:3.50.50.60 250 392 1.2E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_00760 f011158f4493d9598dc6756b3115f6f1 582 Gene3D G3DSA:3.40.50.150 7 245 3.8E-94 T 14-10-2018 CF65_00760 f011158f4493d9598dc6756b3115f6f1 582 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 580 19.396 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 CF65_00760 f011158f4493d9598dc6756b3115f6f1 582 Pfam PF01266 FAD dependent oxidoreductase 265 537 3.8E-35 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CF65_00760 f011158f4493d9598dc6756b3115f6f1 582 Gene3D G3DSA:3.30.9.10 417 568 2.0E-25 T 14-10-2018 CF65_02407 4c96bbe4d6b159d92a2cd3b97f8ffd20 165 Pfam PF00265 Thymidine kinase 2 164 4.8E-56 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CF65_02407 4c96bbe4d6b159d92a2cd3b97f8ffd20 165 PIRSF PIRSF035805 1 165 5.2E-50 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CF65_02407 4c96bbe4d6b159d92a2cd3b97f8ffd20 165 SUPERFAMILY SSF52540 1 141 5.32E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02407 4c96bbe4d6b159d92a2cd3b97f8ffd20 165 Gene3D G3DSA:3.40.50.300 1 141 4.3E-26 T 14-10-2018 CF65_02970 4a43a0df538dc6b80d971443c38a60ac 313 Pfam PF01212 Beta-eliminating lyase 34 285 9.2E-57 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CF65_02970 4a43a0df538dc6b80d971443c38a60ac 313 SUPERFAMILY SSF53383 34 313 4.4E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02970 4a43a0df538dc6b80d971443c38a60ac 313 Gene3D G3DSA:3.40.640.10 22 243 3.2E-86 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_01102 dea840e8ef5b67da65a0a90d78bd5936 178 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 2 177 32.8 T 14-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CF65_01102 dea840e8ef5b67da65a0a90d78bd5936 178 Pfam PF00156 Phosphoribosyl transferase domain 7 148 1.8E-21 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CF65_01102 dea840e8ef5b67da65a0a90d78bd5936 178 SUPERFAMILY SSF53271 2 172 1.57E-37 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like CF65_01102 dea840e8ef5b67da65a0a90d78bd5936 178 Gene3D G3DSA:3.40.50.2020 1 178 2.9E-52 T 14-10-2018 CF65_01132 a3dc4c202d80fcc3e44159c02b05ba07 131 SUPERFAMILY SSF140931 36 105 1.31E-11 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_01132 a3dc4c202d80fcc3e44159c02b05ba07 131 Pfam PF02661 Fic/DOC family 52 124 2.4E-4 T 14-10-2018 IPR003812 Fido domain CF65_01132 a3dc4c202d80fcc3e44159c02b05ba07 131 Gene3D G3DSA:1.10.3290.10 1 131 4.2E-31 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_02273 6eda482d7f93d2b4b4886f18856c2645 69 PRINTS PR00050 Cold shock protein signature 4 19 8.0E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CF65_02273 6eda482d7f93d2b4b4886f18856c2645 69 PRINTS PR00050 Cold shock protein signature 40 58 8.0E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CF65_02273 6eda482d7f93d2b4b4886f18856c2645 69 PRINTS PR00050 Cold shock protein signature 25 34 8.0E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CF65_02273 6eda482d7f93d2b4b4886f18856c2645 69 Gene3D G3DSA:2.40.50.140 1 65 5.0E-23 T 14-10-2018 CF65_02273 6eda482d7f93d2b4b4886f18856c2645 69 PIRSF PIRSF002599 1 69 2.2E-21 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 CF65_02273 6eda482d7f93d2b4b4886f18856c2645 69 Pfam PF00313 'Cold-shock' DNA-binding domain 4 65 1.2E-26 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CF65_02273 6eda482d7f93d2b4b4886f18856c2645 69 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 67 1.7E-39 T 14-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 CF65_02273 6eda482d7f93d2b4b4886f18856c2645 69 SMART SM00357 3 67 2.1E-21 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 CF65_02273 6eda482d7f93d2b4b4886f18856c2645 69 SUPERFAMILY SSF50249 1 66 1.05E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_02273 6eda482d7f93d2b4b4886f18856c2645 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site CF65_00544 6de88fe42bac0a77ac809f221dee3566 402 Gene3D G3DSA:3.90.1720.10 6 199 2.4E-60 T 14-10-2018 CF65_00544 6de88fe42bac0a77ac809f221dee3566 402 SUPERFAMILY SSF54001 13 198 4.02E-61 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CF65_00544 6de88fe42bac0a77ac809f221dee3566 402 SUPERFAMILY SSF56059 208 381 1.02E-35 T 14-10-2018 CF65_00544 6de88fe42bac0a77ac809f221dee3566 402 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 252 379 1.1E-17 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CF65_00544 6de88fe42bac0a77ac809f221dee3566 402 Pfam PF05257 CHAP domain 54 151 1.0E-13 T 14-10-2018 IPR007921 CHAP domain CF65_02525 f18b391e19914920aed511c982e96383 396 Gene3D G3DSA:1.25.40.10 21 205 2.2E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_02525 f18b391e19914920aed511c982e96383 396 SUPERFAMILY SSF48452 39 254 2.15E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_02525 f18b391e19914920aed511c982e96383 396 Gene3D G3DSA:1.25.40.10 206 333 7.1E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_02525 f18b391e19914920aed511c982e96383 396 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 394 33.453 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 CF65_00359 b7eb32b3e5bbe9762f7c8c158c3816ee 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 2.4E-23 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00359 b7eb32b3e5bbe9762f7c8c158c3816ee 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00359 b7eb32b3e5bbe9762f7c8c158c3816ee 63 Gene3D G3DSA:1.10.287.310 1 62 4.7E-29 T 14-10-2018 CF65_00359 b7eb32b3e5bbe9762f7c8c158c3816ee 63 SUPERFAMILY SSF46561 1 61 3.14E-22 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00359 b7eb32b3e5bbe9762f7c8c158c3816ee 63 Pfam PF00831 Ribosomal L29 protein 4 60 2.4E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00359 b7eb32b3e5bbe9762f7c8c158c3816ee 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.21 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01739 c97043488f21504b4fa1eeaaf284f60b 285 Gene3D G3DSA:3.40.1390.30 131 256 1.1E-85 T 14-10-2018 CF65_01739 c97043488f21504b4fa1eeaaf284f60b 285 Gene3D G3DSA:3.40.1390.30 48 270 1.1E-85 T 14-10-2018 CF65_01739 c97043488f21504b4fa1eeaaf284f60b 285 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 35 284 5.2E-80 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CF65_01739 c97043488f21504b4fa1eeaaf284f60b 285 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 42 272 3.0E-62 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CF65_01739 c97043488f21504b4fa1eeaaf284f60b 285 SUPERFAMILY SSF102705 35 284 4.32E-83 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CF65_00940 71d9ff72da158240561fa6a524567e85 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_00940 71d9ff72da158240561fa6a524567e85 295 Pfam PF03466 LysR substrate binding domain 91 291 1.1E-41 T 14-10-2018 IPR005119 LysR, substrate-binding CF65_00940 71d9ff72da158240561fa6a524567e85 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_00940 71d9ff72da158240561fa6a524567e85 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_00940 71d9ff72da158240561fa6a524567e85 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_00940 71d9ff72da158240561fa6a524567e85 295 SUPERFAMILY SSF53850 91 292 1.67E-38 T 14-10-2018 CF65_00940 71d9ff72da158240561fa6a524567e85 295 Gene3D G3DSA:1.10.10.10 1 90 2.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_00940 71d9ff72da158240561fa6a524567e85 295 Gene3D G3DSA:3.40.190.290 91 293 3.8E-40 T 14-10-2018 CF65_00940 71d9ff72da158240561fa6a524567e85 295 SUPERFAMILY SSF46785 1 87 1.25E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00942 249253346ab8ceaa8458063d6ee20014 199 Gene3D G3DSA:3.40.50.1240 1 192 2.3E-48 T 14-10-2018 IPR029033 Histidine phosphatase superfamily CF65_00942 249253346ab8ceaa8458063d6ee20014 199 SUPERFAMILY SSF53254 2 191 1.67E-46 T 14-10-2018 IPR029033 Histidine phosphatase superfamily CF65_00942 249253346ab8ceaa8458063d6ee20014 199 SMART SM00855 2 150 1.9E-22 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_00942 249253346ab8ceaa8458063d6ee20014 199 PIRSF PIRSF000709 1 189 1.0E-15 T 14-10-2018 CF65_00942 249253346ab8ceaa8458063d6ee20014 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 180 5.5E-46 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CF65_00942 249253346ab8ceaa8458063d6ee20014 199 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 CF65_01101 5eb1161342e598751f3fc7b951e76677 310 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 204 225 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CF65_01101 5eb1161342e598751f3fc7b951e76677 310 Gene3D G3DSA:3.10.50.40 166 267 6.6E-56 T 14-10-2018 CF65_01101 5eb1161342e598751f3fc7b951e76677 310 Gene3D G3DSA:1.10.4030.30 27 289 6.6E-56 T 14-10-2018 CF65_01101 5eb1161342e598751f3fc7b951e76677 310 Pfam PF09312 SurA N-terminal domain 53 128 3.1E-11 T 14-10-2018 IPR015391 SurA N-terminal CF65_01101 5eb1161342e598751f3fc7b951e76677 310 SUPERFAMILY SSF54534 164 268 1.44E-28 T 14-10-2018 CF65_01101 5eb1161342e598751f3fc7b951e76677 310 Pfam PF00639 PPIC-type PPIASE domain 172 264 2.1E-22 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CF65_01101 5eb1161342e598751f3fc7b951e76677 310 SUPERFAMILY SSF109998 27 193 2.16E-31 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 Gene3D G3DSA:3.40.50.880 2 191 1.5E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 Pfam PF00117 Glutamine amidotransferase class-I 6 186 1.1E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 PRINTS PR00097 Anthranilate synthase component II signature 124 136 2.4E-33 T 14-10-2018 CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 PRINTS PR00097 Anthranilate synthase component II signature 4 18 2.4E-33 T 14-10-2018 CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 PRINTS PR00097 Anthranilate synthase component II signature 79 90 2.4E-33 T 14-10-2018 CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 PRINTS PR00097 Anthranilate synthase component II signature 166 179 2.4E-33 T 14-10-2018 CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 PRINTS PR00097 Anthranilate synthase component II signature 52 61 2.4E-33 T 14-10-2018 CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 PRINTS PR00097 Anthranilate synthase component II signature 104 112 2.4E-33 T 14-10-2018 CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 185 8.3E-56 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 6.5E-13 T 14-10-2018 CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 6.5E-13 T 14-10-2018 CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 6.5E-13 T 14-10-2018 CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 SUPERFAMILY SSF52317 1 192 3.0E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 3.7E-5 T 14-10-2018 CF65_02175 2a13ae7ec58153c31d92ca199d482b26 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 3.7E-5 T 14-10-2018 CF65_02473 da45219575b66503d8011554d3f464f7 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 310 6.4E-102 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 CF65_02473 da45219575b66503d8011554d3f464f7 328 PIRSF PIRSF006470 1 328 1.7E-83 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 CF65_02473 da45219575b66503d8011554d3f464f7 328 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 286 2.5E-99 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 CF65_02473 da45219575b66503d8011554d3f464f7 328 Gene3D G3DSA:3.40.190.170 23 328 3.2E-122 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CF65_02836 383b6e65e076f3a262c703496e4b0c8e 229 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 9.5E-40 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CF65_02836 383b6e65e076f3a262c703496e4b0c8e 229 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 1.2E-92 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CF65_02836 383b6e65e076f3a262c703496e4b0c8e 229 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 42.755 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CF65_01019 ed72631fdc742ad94dc32ed3c8153a94 139 Pfam PF03652 Holliday junction resolvase 4 135 4.5E-41 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CF65_01019 ed72631fdc742ad94dc32ed3c8153a94 139 SMART SM00732 3 103 5.5E-39 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CF65_01019 ed72631fdc742ad94dc32ed3c8153a94 139 SUPERFAMILY SSF53098 4 136 1.12E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_01019 ed72631fdc742ad94dc32ed3c8153a94 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 138 24.923 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CF65_01019 ed72631fdc742ad94dc32ed3c8153a94 139 Gene3D G3DSA:3.30.420.140 2 137 2.8E-44 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 CF65_01019 ed72631fdc742ad94dc32ed3c8153a94 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 4.1E-59 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CF65_02499 c687bc903f7f71d6bc308586783983d8 317 SUPERFAMILY SSF53448 2 188 2.73E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02499 c687bc903f7f71d6bc308586783983d8 317 Pfam PF00535 Glycosyl transferase family 2 7 162 9.5E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CF65_02499 c687bc903f7f71d6bc308586783983d8 317 Gene3D G3DSA:3.90.550.10 2 193 2.8E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00296 1affbc37934e36199c9aee6810668481 417 SUPERFAMILY SSF54631 183 318 6.05E-23 T 14-10-2018 CF65_00296 1affbc37934e36199c9aee6810668481 417 SUPERFAMILY SSF56176 326 415 3.27E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CF65_00296 1affbc37934e36199c9aee6810668481 417 Pfam PF00571 CBS domain 267 315 2.8E-5 T 14-10-2018 IPR000644 CBS domain CF65_00296 1affbc37934e36199c9aee6810668481 417 SMART SM01091 328 408 6.0E-26 T 14-10-2018 IPR005170 Transporter-associated domain CF65_00296 1affbc37934e36199c9aee6810668481 417 Gene3D G3DSA:3.30.465.10 329 410 4.1E-30 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CF65_00296 1affbc37934e36199c9aee6810668481 417 Pfam PF03471 Transporter associated domain 329 406 1.1E-18 T 14-10-2018 IPR005170 Transporter-associated domain CF65_00296 1affbc37934e36199c9aee6810668481 417 Gene3D G3DSA:3.10.580.10 176 328 3.1E-33 T 14-10-2018 CF65_00296 1affbc37934e36199c9aee6810668481 417 Pfam PF01595 Domain of unknown function DUF21 2 180 1.4E-36 T 14-10-2018 IPR002550 CNNM, transmembrane domain CF65_01596 abbbf04eb71633667616199c0a86cd6a 556 Pfam PF00884 Sulfatase 243 514 1.8E-28 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CF65_01596 abbbf04eb71633667616199c0a86cd6a 556 Gene3D G3DSA:3.40.720.10 234 545 1.5E-44 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CF65_01596 abbbf04eb71633667616199c0a86cd6a 556 SUPERFAMILY SSF53649 243 527 6.73E-13 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CF65_00318 ce292f150ee3f2f075de64c18cc09741 271 Pfam PF13503 Domain of unknown function (DUF4123) 58 178 1.6E-17 T 14-10-2018 IPR025391 Domain of unknown function DUF4123 CF65_00591 74d03c6bc99f9c2f681c5d6835429c72 605 Gene3D G3DSA:3.40.50.300 379 601 1.6E-36 T 14-10-2018 CF65_00591 74d03c6bc99f9c2f681c5d6835429c72 605 Pfam PF00005 ABC transporter 419 552 2.9E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_00591 74d03c6bc99f9c2f681c5d6835429c72 605 SUPERFAMILY SSF90123 72 379 1.31E-17 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_00591 74d03c6bc99f9c2f681c5d6835429c72 605 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 431 444 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CF65_00591 74d03c6bc99f9c2f681c5d6835429c72 605 SMART SM00382 427 598 1.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00591 74d03c6bc99f9c2f681c5d6835429c72 605 ProSitePatterns PS00211 ABC transporters family signature. 524 538 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_00591 74d03c6bc99f9c2f681c5d6835429c72 605 Gene3D G3DSA:1.20.1560.10 50 378 2.7E-7 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CF65_00591 74d03c6bc99f9c2f681c5d6835429c72 605 SUPERFAMILY SSF52540 402 594 2.66E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00591 74d03c6bc99f9c2f681c5d6835429c72 605 Pfam PF06472 ABC transporter transmembrane region 2 47 334 1.8E-72 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CF65_00672 8e439bd91689ccb9b1e4dd7b4c0061bf 114 SUPERFAMILY SSF50118 1 108 2.62E-31 T 14-10-2018 CF65_00672 8e439bd91689ccb9b1e4dd7b4c0061bf 114 Gene3D G3DSA:2.30.30.110 1 111 2.7E-33 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CF65_00672 8e439bd91689ccb9b1e4dd7b4c0061bf 114 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 106 5.5E-20 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 CF65_01374 623c051602be94df87b14e3d17a3009f 245 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 243 3.4E-87 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 CF65_01374 623c051602be94df87b14e3d17a3009f 245 Pfam PF00588 SpoU rRNA Methylase family 96 237 8.6E-40 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CF65_01374 623c051602be94df87b14e3d17a3009f 245 Gene3D G3DSA:3.40.1280.10 79 244 2.5E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CF65_01374 623c051602be94df87b14e3d17a3009f 245 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 78 2.9E-18 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CF65_01374 623c051602be94df87b14e3d17a3009f 245 Gene3D G3DSA:3.30.1330.30 1 75 6.3E-27 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like CF65_01374 623c051602be94df87b14e3d17a3009f 245 SMART SM00967 4 80 1.8E-18 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CF65_01374 623c051602be94df87b14e3d17a3009f 245 SUPERFAMILY SSF75217 81 244 1.24E-47 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases CF65_01374 623c051602be94df87b14e3d17a3009f 245 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 244 43.982 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CF65_01374 623c051602be94df87b14e3d17a3009f 245 SUPERFAMILY SSF55315 2 76 2.94E-18 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like CF65_01243 df7ea0a167831d631f15d3aed2eeba92 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.659 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01243 df7ea0a167831d631f15d3aed2eeba92 129 Pfam PF01196 Ribosomal protein L17 20 116 1.0E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01243 df7ea0a167831d631f15d3aed2eeba92 129 Gene3D G3DSA:3.90.1030.10 1 117 3.0E-48 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01243 df7ea0a167831d631f15d3aed2eeba92 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.8E-51 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01243 df7ea0a167831d631f15d3aed2eeba92 129 SUPERFAMILY SSF64263 1 119 1.22E-50 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01243 df7ea0a167831d631f15d3aed2eeba92 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00726 c01bbe68b4b3dd2c697699ef7f1d6745 514 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 2.5E-39 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CF65_00726 c01bbe68b4b3dd2c697699ef7f1d6745 514 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 56 453 3.2E-98 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CF65_00726 c01bbe68b4b3dd2c697699ef7f1d6745 514 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 3 490 24.115 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CF65_00726 c01bbe68b4b3dd2c697699ef7f1d6745 514 SUPERFAMILY SSF56317 217 485 6.8E-44 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CF65_00726 c01bbe68b4b3dd2c697699ef7f1d6745 514 Gene3D G3DSA:3.60.110.10 216 476 2.2E-16 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CF65_02139 3aae144835dc3959b2e347e316bd9d6f 326 Pfam PF13533 Biotin-lipoyl like 48 91 8.2E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CF65_02139 3aae144835dc3959b2e347e316bd9d6f 326 Pfam PF13437 HlyD family secretion protein 184 290 1.6E-9 T 14-10-2018 CF65_02139 3aae144835dc3959b2e347e316bd9d6f 326 Gene3D G3DSA:2.40.30.170 219 275 2.5E-33 T 14-10-2018 CF65_02139 3aae144835dc3959b2e347e316bd9d6f 326 SUPERFAMILY SSF111369 46 235 1.7E-11 T 14-10-2018 CF65_02139 3aae144835dc3959b2e347e316bd9d6f 326 Gene3D G3DSA:2.40.50.100 44 218 2.5E-33 T 14-10-2018 CF65_02139 3aae144835dc3959b2e347e316bd9d6f 326 Gene3D G3DSA:1.10.287.470 78 183 2.5E-33 T 14-10-2018 CF65_00565 ff32794db6e54579b34ed7f3c26634af 156 SUPERFAMILY SSF47973 6 149 1.07E-60 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily CF65_00565 ff32794db6e54579b34ed7f3c26634af 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.967 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CF65_00565 ff32794db6e54579b34ed7f3c26634af 156 Gene3D G3DSA:1.10.455.10 2 155 3.3E-64 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily CF65_00565 ff32794db6e54579b34ed7f3c26634af 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00565 ff32794db6e54579b34ed7f3c26634af 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.0E-72 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CF65_00565 ff32794db6e54579b34ed7f3c26634af 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 9.1E-67 T 14-10-2018 IPR023798 Ribosomal protein S7 domain CF65_00565 ff32794db6e54579b34ed7f3c26634af 156 PIRSF PIRSF002122 2 156 3.9E-63 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CF65_01522 4d1c7b30977a51d31ed12d9f20518649 120 SUPERFAMILY SSF75169 1 120 1.85E-34 T 14-10-2018 IPR027396 DsrEFH-like CF65_01522 4d1c7b30977a51d31ed12d9f20518649 120 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 120 3.2E-45 T 14-10-2018 IPR017462 Sulphur relay, TusC/DsrF CF65_01522 4d1c7b30977a51d31ed12d9f20518649 120 Pfam PF02635 DsrE/DsrF-like family 3 120 4.8E-24 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein CF65_01522 4d1c7b30977a51d31ed12d9f20518649 120 Gene3D G3DSA:3.40.1260.10 1 120 1.7E-38 T 14-10-2018 IPR027396 DsrEFH-like CF65_02004 e55f959a528615aece1e97b40d92131b 367 SUPERFAMILY SSF53474 4 358 1.05E-100 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_02004 e55f959a528615aece1e97b40d92131b 367 Gene3D G3DSA:3.40.50.1820 19 347 1.7E-136 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_02004 e55f959a528615aece1e97b40d92131b 367 PIRSF PIRSF000443 1 366 1.1E-122 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 CF65_02004 e55f959a528615aece1e97b40d92131b 367 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 1 358 30.077 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 CF65_02004 e55f959a528615aece1e97b40d92131b 367 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 11 356 1.0E-135 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 CF65_02004 e55f959a528615aece1e97b40d92131b 367 Gene3D G3DSA:1.10.1740.110 175 278 1.7E-136 T 14-10-2018 CF65_02004 e55f959a528615aece1e97b40d92131b 367 Pfam PF00561 alpha/beta hydrolase fold 41 345 1.1E-45 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CF65_01449 0cadf8c059ff37fea2448b2457fb0084 307 Gene3D G3DSA:1.10.443.10 216 298 9.5E-6 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CF65_01449 0cadf8c059ff37fea2448b2457fb0084 307 Gene3D G3DSA:3.30.160.390 12 99 3.4E-21 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CF65_01449 0cadf8c059ff37fea2448b2457fb0084 307 Pfam PF13356 Arm DNA-binding domain 14 96 1.3E-14 T 14-10-2018 IPR025166 Integrase, DNA-binding domain CF65_01449 0cadf8c059ff37fea2448b2457fb0084 307 SUPERFAMILY SSF56349 110 280 6.77E-28 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CF65_01449 0cadf8c059ff37fea2448b2457fb0084 307 Gene3D G3DSA:1.10.150.130 100 215 1.9E-26 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal CF65_01449 0cadf8c059ff37fea2448b2457fb0084 307 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 110 159 4.2E-6 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CF65_02876 9fc5820ee4bf7a92341329bac45b7e72 127 Pfam PF13992 YecR-like lipoprotein 52 124 3.1E-26 T 14-10-2018 IPR025731 YecR-like lipoprotein CF65_02657 e6c3ff9095783d8597b5430a1359fea2 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 3.5E-21 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CF65_02657 e6c3ff9095783d8597b5430a1359fea2 83 SUPERFAMILY SSF143120 1 80 6.41E-24 T 14-10-2018 IPR036165 YefM-like superfamily CF65_02657 e6c3ff9095783d8597b5430a1359fea2 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 56 3.2E-11 T 14-10-2018 CF65_02657 e6c3ff9095783d8597b5430a1359fea2 83 Gene3D G3DSA:3.40.1620.10 1 40 7.0E-19 T 14-10-2018 CF65_02657 e6c3ff9095783d8597b5430a1359fea2 83 Gene3D G3DSA:1.10.1220.170 41 83 1.8E-12 T 14-10-2018 CF65_00429 c3b84869de1e6cafb8b65a6e2e3cfb83 415 Pfam PF00294 pfkB family carbohydrate kinase 155 264 1.6E-6 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB CF65_00429 c3b84869de1e6cafb8b65a6e2e3cfb83 415 SUPERFAMILY SSF53613 7 271 1.48E-16 T 14-10-2018 IPR029056 Ribokinase-like CF65_00429 c3b84869de1e6cafb8b65a6e2e3cfb83 415 Gene3D G3DSA:3.40.50.450 284 411 3.1E-27 T 14-10-2018 CF65_00429 c3b84869de1e6cafb8b65a6e2e3cfb83 415 SUPERFAMILY SSF52309 286 387 1.47E-25 T 14-10-2018 CF65_00429 c3b84869de1e6cafb8b65a6e2e3cfb83 415 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 292 386 3.8E-17 T 14-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 CF65_00429 c3b84869de1e6cafb8b65a6e2e3cfb83 415 Gene3D G3DSA:3.40.1190.20 2 283 2.1E-16 T 14-10-2018 IPR029056 Ribokinase-like CF65_01932 df73245a59a1db557d61643a5417a3aa 305 Gene3D G3DSA:2.30.130.10 247 305 9.9E-7 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 CF65_01932 df73245a59a1db557d61643a5417a3aa 305 SUPERFAMILY SSF55120 10 241 1.21E-82 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01932 df73245a59a1db557d61643a5417a3aa 305 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 248 303 1.1E-16 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01932 df73245a59a1db557d61643a5417a3aa 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 303 18.917 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01932 df73245a59a1db557d61643a5417a3aa 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 1.7E-57 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CF65_01932 df73245a59a1db557d61643a5417a3aa 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 242 1.2E-23 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CF65_01932 df73245a59a1db557d61643a5417a3aa 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 1.3E-91 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_01932 df73245a59a1db557d61643a5417a3aa 305 SUPERFAMILY SSF88697 247 304 2.44E-10 T 14-10-2018 IPR015947 PUA-like superfamily CF65_01932 df73245a59a1db557d61643a5417a3aa 305 Gene3D G3DSA:3.30.2350.10 1 243 4.4E-94 T 14-10-2018 CF65_02698 8e4f3ef91d34a29fe877e31401733fab 162 SMART SM00926 24 77 7.8E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02698 8e4f3ef91d34a29fe877e31401733fab 162 Pfam PF00384 Molybdopterin oxidoreductase 84 160 6.9E-12 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02698 8e4f3ef91d34a29fe877e31401733fab 162 SUPERFAMILY SSF53706 24 162 8.77E-45 T 14-10-2018 CF65_02698 8e4f3ef91d34a29fe877e31401733fab 162 Gene3D G3DSA:2.20.25.90 24 78 6.7E-19 T 14-10-2018 CF65_02698 8e4f3ef91d34a29fe877e31401733fab 162 Gene3D G3DSA:3.40.50.740 84 162 6.0E-27 T 14-10-2018 CF65_02698 8e4f3ef91d34a29fe877e31401733fab 162 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 29 47 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CF65_02698 8e4f3ef91d34a29fe877e31401733fab 162 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 25 76 3.1E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02434 59f8cbe961e5a1a3f6426d530cb70acf 635 Pfam PF03239 Iron permease FTR1 family 230 552 9.0E-53 T 14-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 CF65_01335 04b6ab7464ee58cd2e91bde41334f819 679 SUPERFAMILY SSF52540 167 547 5.7E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01335 04b6ab7464ee58cd2e91bde41334f819 679 Gene3D G3DSA:3.40.50.300 135 326 7.2E-73 T 14-10-2018 CF65_01335 04b6ab7464ee58cd2e91bde41334f819 679 SMART SM00490 439 536 3.4E-8 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_01335 04b6ab7464ee58cd2e91bde41334f819 679 Pfam PF00271 Helicase conserved C-terminal domain 452 535 1.8E-6 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_01335 04b6ab7464ee58cd2e91bde41334f819 679 SMART SM00487 143 337 8.0E-19 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_01335 04b6ab7464ee58cd2e91bde41334f819 679 TIGRFAM TIGR00595 priA: primosomal protein N' 168 676 5.3E-194 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CF65_01335 04b6ab7464ee58cd2e91bde41334f819 679 Pfam PF00270 DEAD/DEAH box helicase 168 312 6.7E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CF65_01335 04b6ab7464ee58cd2e91bde41334f819 679 Hamap MF_00983 Probable primosomal protein N' [priA]. 1 678 22.66 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CF65_01335 04b6ab7464ee58cd2e91bde41334f819 679 Gene3D G3DSA:1.10.8.630 1 58 4.3E-14 T 14-10-2018 CF65_02954 0af94c83ea680937c13d0b45b49feaa3 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.702 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CF65_02954 0af94c83ea680937c13d0b45b49feaa3 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 3.4E-101 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CF65_02954 0af94c83ea680937c13d0b45b49feaa3 314 Pfam PF02401 LytB protein 3 282 1.0E-92 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CF65_02954 0af94c83ea680937c13d0b45b49feaa3 314 Gene3D G3DSA:3.40.1010.20 97 196 1.6E-113 T 14-10-2018 CF65_02954 0af94c83ea680937c13d0b45b49feaa3 314 Gene3D G3DSA:3.40.1010.20 6 282 1.6E-113 T 14-10-2018 CF65_02954 0af94c83ea680937c13d0b45b49feaa3 314 Gene3D G3DSA:3.40.50.11270 12 96 1.6E-113 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.1E-34 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 Gene3D G3DSA:3.30.390.30 346 467 9.6E-45 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PIRSF PIRSF000350 1 468 1.4E-88 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 1.7E-39 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.7E-39 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.7E-39 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.7E-39 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 1.7E-39 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 SUPERFAMILY SSF51905 7 381 1.05E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 SUPERFAMILY SSF55424 343 466 9.97E-39 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.7E-68 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.7E-68 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.7E-68 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.7E-68 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.7E-68 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.7E-68 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.7E-68 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.7E-68 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.7E-68 T 14-10-2018 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.9E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 Gene3D G3DSA:3.50.50.60 151 271 5.5E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 Gene3D G3DSA:3.50.50.60 9 332 5.5E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01988 44d92fb9b8a0de60f81a54bf6edeea82 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 1.9E-150 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CF65_00605 27670f8eb4e0abcffcd45154202d675b 289 Pfam PF01148 Cytidylyltransferase family 3 287 2.0E-71 T 14-10-2018 CF65_00605 27670f8eb4e0abcffcd45154202d675b 289 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 246 272 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CF65_01158 a7d66bc083a84ce4dfe927d9216b8da8 138 SMART SM00363 14 77 5.4E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01158 a7d66bc083a84ce4dfe927d9216b8da8 138 Gene3D G3DSA:3.10.290.10 7 113 3.7E-39 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CF65_01158 a7d66bc083a84ce4dfe927d9216b8da8 138 SUPERFAMILY SSF55174 14 108 2.22E-29 T 14-10-2018 CF65_01158 a7d66bc083a84ce4dfe927d9216b8da8 138 Pfam PF01479 S4 domain 14 58 1.3E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01158 a7d66bc083a84ce4dfe927d9216b8da8 138 PIRSF PIRSF016821 11 138 2.0E-44 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CF65_01616 f8fbef89e239719d5a8f4fb498a2959a 228 Pfam PF00005 ABC transporter 25 173 1.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01616 f8fbef89e239719d5a8f4fb498a2959a 228 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01616 f8fbef89e239719d5a8f4fb498a2959a 228 SMART SM00382 34 222 1.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01616 f8fbef89e239719d5a8f4fb498a2959a 228 Gene3D G3DSA:3.40.50.300 3 228 3.0E-68 T 14-10-2018 CF65_01616 f8fbef89e239719d5a8f4fb498a2959a 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 1.6E-107 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 CF65_01616 f8fbef89e239719d5a8f4fb498a2959a 228 SUPERFAMILY SSF52540 5 226 6.69E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 216 509 2.8E-116 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 SUPERFAMILY SSF51735 24 217 3.54E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 30 510 92.479 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 PIRSF PIRSF000110 16 512 4.3E-177 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 Gene3D G3DSA:3.30.360.10 203 510 4.1E-125 T 14-10-2018 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 30 510 7.6E-208 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 194 222 7.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 170 183 7.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 246 263 7.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 264 280 7.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 355 381 7.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 Gene3D G3DSA:3.40.50.720 27 202 8.9E-55 T 14-10-2018 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 204 210 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 SUPERFAMILY SSF55347 204 510 2.26E-114 T 14-10-2018 CF65_01167 948818eb81ccd2a1b6b778a477e3f8be 519 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 34 214 1.8E-59 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CF65_01250 16790f33f51c869ec402c4ea3e7a1a0a 423 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 65 135 1.7E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CF65_01250 16790f33f51c869ec402c4ea3e7a1a0a 423 Pfam PF13521 AAA domain 234 394 2.9E-29 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain CF65_01250 16790f33f51c869ec402c4ea3e7a1a0a 423 PIRSF PIRSF004776 4 415 8.3E-187 T 14-10-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 CF65_01250 16790f33f51c869ec402c4ea3e7a1a0a 423 SUPERFAMILY SSF47413 5 58 3.38E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_01250 16790f33f51c869ec402c4ea3e7a1a0a 423 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 63 395 5.0E-157 T 14-10-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0000309|GO:0009435 KEGG: 00760+2.7.7.1+2.7.1.22 CF65_01250 16790f33f51c869ec402c4ea3e7a1a0a 423 Gene3D G3DSA:3.40.50.620 62 230 7.0E-51 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01250 16790f33f51c869ec402c4ea3e7a1a0a 423 Gene3D G3DSA:1.10.260.40 5 60 1.4E-5 T 14-10-2018 CF65_01250 16790f33f51c869ec402c4ea3e7a1a0a 423 Pfam PF01467 Cytidylyltransferase-like 68 134 3.1E-5 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CF65_01250 16790f33f51c869ec402c4ea3e7a1a0a 423 SUPERFAMILY SSF52540 230 404 1.44E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01250 16790f33f51c869ec402c4ea3e7a1a0a 423 SUPERFAMILY SSF52374 63 223 5.33E-21 T 14-10-2018 CF65_01250 16790f33f51c869ec402c4ea3e7a1a0a 423 Gene3D G3DSA:3.40.50.300 231 399 4.0E-60 T 14-10-2018 CF65_01250 16790f33f51c869ec402c4ea3e7a1a0a 423 SMART SM00530 6 62 4.2E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CF65_02044 c18fc9fa096e6d95a0a25051eb536dc6 149 Gene3D G3DSA:3.40.930.10 2 147 2.8E-36 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CF65_02044 c18fc9fa096e6d95a0a25051eb536dc6 149 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 143 3.4E-27 T 14-10-2018 IPR002178 PTS EIIA type-2 domain CF65_02044 c18fc9fa096e6d95a0a25051eb536dc6 149 SUPERFAMILY SSF55804 6 135 1.7E-29 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CF65_02162 e627546e96ac27aef20a6fc5daa8d59d 162 Pfam PF00877 NlpC/P60 family 55 161 5.6E-32 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain CF65_02162 e627546e96ac27aef20a6fc5daa8d59d 162 SUPERFAMILY SSF54001 48 162 5.64E-40 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CF65_02162 e627546e96ac27aef20a6fc5daa8d59d 162 Gene3D G3DSA:3.90.1720.10 44 162 2.8E-41 T 14-10-2018 CF65_01487 010aa204a257b2860176fd49aaadaec9 182 Gene3D G3DSA:1.10.520.20 2 111 1.1E-33 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01487 010aa204a257b2860176fd49aaadaec9 182 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.2E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01487 010aa204a257b2860176fd49aaadaec9 182 PRINTS PR00125 ATP synthase delta subunit signature 90 104 3.2E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01487 010aa204a257b2860176fd49aaadaec9 182 PRINTS PR00125 ATP synthase delta subunit signature 79 90 3.2E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01487 010aa204a257b2860176fd49aaadaec9 182 PRINTS PR00125 ATP synthase delta subunit signature 140 155 3.2E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01487 010aa204a257b2860176fd49aaadaec9 182 PRINTS PR00125 ATP synthase delta subunit signature 155 173 3.2E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01487 010aa204a257b2860176fd49aaadaec9 182 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 182 18.272 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01487 010aa204a257b2860176fd49aaadaec9 182 SUPERFAMILY SSF47928 3 109 2.35E-25 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01487 010aa204a257b2860176fd49aaadaec9 182 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 180 3.2E-59 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01487 010aa204a257b2860176fd49aaadaec9 182 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 180 3.5E-49 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CF65_01879 1827f2a059ba60c8898a7012fafece7a 434 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 432 28.885 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CF65_01879 1827f2a059ba60c8898a7012fafece7a 434 SUPERFAMILY SSF69742 1 168 7.72E-44 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CF65_01879 1827f2a059ba60c8898a7012fafece7a 434 SUPERFAMILY SSF51735 172 329 1.89E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01879 1827f2a059ba60c8898a7012fafece7a 434 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 166 1.7E-46 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CF65_01879 1827f2a059ba60c8898a7012fafece7a 434 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 334 423 1.3E-20 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CF65_01879 1827f2a059ba60c8898a7012fafece7a 434 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 182 320 1.2E-43 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CF65_01879 1827f2a059ba60c8898a7012fafece7a 434 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 104 127 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CF65_01879 1827f2a059ba60c8898a7012fafece7a 434 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 418 2.2E-128 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CF65_01879 1827f2a059ba60c8898a7012fafece7a 434 SUPERFAMILY SSF69075 332 431 5.1E-26 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CF65_01879 1827f2a059ba60c8898a7012fafece7a 434 Gene3D G3DSA:3.40.50.720 171 327 3.2E-39 T 14-10-2018 CF65_01879 1827f2a059ba60c8898a7012fafece7a 434 Gene3D G3DSA:3.30.460.30 1 168 8.6E-50 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CF65_01879 1827f2a059ba60c8898a7012fafece7a 434 PIRSF PIRSF000445 1 434 1.9E-143 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CF65_00367 3bff3bbdb0be08724a00af0e9c1c5450 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 80 95 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00367 3bff3bbdb0be08724a00af0e9c1c5450 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.659 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CF65_00367 3bff3bbdb0be08724a00af0e9c1c5450 100 Gene3D G3DSA:3.30.70.330 1 99 2.5E-38 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CF65_00367 3bff3bbdb0be08724a00af0e9c1c5450 100 Pfam PF00276 Ribosomal protein L23 8 94 7.3E-33 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CF65_00367 3bff3bbdb0be08724a00af0e9c1c5450 100 SUPERFAMILY SSF54189 2 91 1.29E-31 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_00280 565e3793844687f405473b946a567e4c 429 Gene3D G3DSA:3.90.1150.10 11 416 1.1E-158 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_00280 565e3793844687f405473b946a567e4c 429 Gene3D G3DSA:3.40.640.10 62 332 1.1E-158 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_00280 565e3793844687f405473b946a567e4c 429 SUPERFAMILY SSF53383 5 425 1.02E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_00280 565e3793844687f405473b946a567e4c 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 426 48.298 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CF65_00280 565e3793844687f405473b946a567e4c 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 423 2.9E-171 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CF65_00280 565e3793844687f405473b946a567e4c 429 Pfam PF00202 Aminotransferase class-III 27 421 1.0E-129 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CF65_00280 565e3793844687f405473b946a567e4c 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 244 281 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 Gene3D G3DSA:3.40.50.10860 8 275 2.5E-111 T 14-10-2018 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.8E-40 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 SUPERFAMILY SSF51735 123 279 1.41E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 5.3E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 5.3E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 5.3E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 5.3E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 5.3E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 5.3E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 5.3E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 3.4E-71 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 38.361 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 SUPERFAMILY SSF53223 1 122 4.99E-40 T 14-10-2018 CF65_01286 5be30cd8935ffa4d1857b41ee5ed1cb9 285 Gene3D G3DSA:3.40.50.720 6 258 2.5E-111 T 14-10-2018 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 PIRSF PIRSF001535 1 571 2.9E-271 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 Gene3D G3DSA:3.90.960.10 240 387 1.6E-241 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 Gene3D G3DSA:3.40.50.800 4 553 1.6E-241 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 SUPERFAMILY SSF55681 10 477 3.64E-106 T 14-10-2018 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 457 8.0E-50 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 Pfam PF04073 Aminoacyl-tRNA editing domain 256 374 2.1E-25 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 570 42.517 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 SUPERFAMILY SSF55826 219 388 2.62E-31 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 1.5E-275 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 Gene3D G3DSA:3.30.930.10 11 463 1.6E-241 T 14-10-2018 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 4.2E-19 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 4.2E-19 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 4.2E-19 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 4.2E-19 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 Pfam PF03129 Anticodon binding domain 475 567 9.3E-22 T 14-10-2018 IPR004154 Anticodon-binding CF65_00896 9fbf1188f018eb4788c871c3aa756c1a 571 SUPERFAMILY SSF52954 462 570 3.93E-30 T 14-10-2018 CF65_01959 2e92deb6e9879cb9647109914ffb5233 324 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 4 322 40.613 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CF65_01959 2e92deb6e9879cb9647109914ffb5233 324 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 17 320 1.2E-107 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CF65_01959 2e92deb6e9879cb9647109914ffb5233 324 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 11 316 1.7E-118 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CF65_01959 2e92deb6e9879cb9647109914ffb5233 324 SUPERFAMILY SSF52540 44 193 1.63E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01031 357caa32f5e69502d924774a1d2e60dc 282 PIRSF PIRSF009437 22 282 4.5E-94 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 CF65_01031 357caa32f5e69502d924774a1d2e60dc 282 SMART SM00900 171 268 1.1E-27 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CF65_01031 357caa32f5e69502d924774a1d2e60dc 282 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 28 280 33.798 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 CF65_01031 357caa32f5e69502d924774a1d2e60dc 282 Pfam PF04205 FMN-binding domain 171 262 4.3E-14 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CF65_01031 357caa32f5e69502d924774a1d2e60dc 282 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 27 276 8.6E-87 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 CF65_02782 fc67510bce7b6afb752615d188b03db4 875 SUPERFAMILY SSF56935 43 870 8.11E-77 T 14-10-2018 CF65_02782 fc67510bce7b6afb752615d188b03db4 875 Pfam PF00593 TonB dependent receptor 347 869 5.9E-39 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_02782 fc67510bce7b6afb752615d188b03db4 875 Gene3D G3DSA:2.40.170.20 238 870 9.7E-105 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_02782 fc67510bce7b6afb752615d188b03db4 875 Gene3D G3DSA:2.170.130.10 58 183 1.8E-31 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_02782 fc67510bce7b6afb752615d188b03db4 875 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 169 5.1E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain CF65_02210 86687aa35b711dbafa1cd37bcb0550f1 561 PRINTS PR01183 Ribonucleotide reductase large chain signature 331 353 5.5E-13 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_02210 86687aa35b711dbafa1cd37bcb0550f1 561 PRINTS PR01183 Ribonucleotide reductase large chain signature 392 419 5.5E-13 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_02210 86687aa35b711dbafa1cd37bcb0550f1 561 PRINTS PR01183 Ribonucleotide reductase large chain signature 164 183 5.5E-13 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_02210 86687aa35b711dbafa1cd37bcb0550f1 561 Pfam PF02867 Ribonucleotide reductase, barrel domain 388 539 3.6E-35 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_02210 86687aa35b711dbafa1cd37bcb0550f1 561 Pfam PF02867 Ribonucleotide reductase, barrel domain 217 383 1.1E-26 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_02210 86687aa35b711dbafa1cd37bcb0550f1 561 Pfam PF02867 Ribonucleotide reductase, barrel domain 91 215 5.7E-23 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_02210 86687aa35b711dbafa1cd37bcb0550f1 561 SUPERFAMILY SSF51998 90 540 1.53E-110 T 14-10-2018 CF65_02210 86687aa35b711dbafa1cd37bcb0550f1 561 TIGRFAM TIGR02510 NrdE-prime: ribonucleoside-diphosphate reductase, alpha chain 16 561 1.1E-245 T 14-10-2018 IPR013350 Ribonucleotide reductase alpha chain CF65_02210 86687aa35b711dbafa1cd37bcb0550f1 561 Gene3D G3DSA:3.20.70.20 24 215 1.7E-38 T 14-10-2018 CF65_02210 86687aa35b711dbafa1cd37bcb0550f1 561 Gene3D G3DSA:3.20.70.20 216 549 6.8E-91 T 14-10-2018 CF65_02476 8b05944a2b407d8c4b9b61431d29c133 376 Gene3D G3DSA:2.120.10.80 13 166 3.4E-20 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 CF65_02476 8b05944a2b407d8c4b9b61431d29c133 376 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 5 376 45.653 T 14-10-2018 IPR019936 Mutatrotase, YjhT-like CF65_02476 8b05944a2b407d8c4b9b61431d29c133 376 Gene3D G3DSA:2.120.10.80 181 374 4.7E-11 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 CF65_02476 8b05944a2b407d8c4b9b61431d29c133 376 SUPERFAMILY SSF117281 43 365 3.27E-34 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 CF65_02476 8b05944a2b407d8c4b9b61431d29c133 376 Pfam PF01344 Kelch motif 79 126 6.3E-9 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 CF65_02476 8b05944a2b407d8c4b9b61431d29c133 376 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 26 368 1.7E-144 T 14-10-2018 IPR019936 Mutatrotase, YjhT-like CF65_02218 cc2b6f386f4f2dd2bab8a8bf3d024878 83 SUPERFAMILY SSF51569 35 77 4.76E-7 T 14-10-2018 CF65_02218 cc2b6f386f4f2dd2bab8a8bf3d024878 83 Gene3D G3DSA:3.20.20.70 1 83 1.6E-25 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 Gene3D G3DSA:3.40.50.300 1 201 3.7E-64 T 14-10-2018 CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 Gene3D G3DSA:3.40.50.300 235 383 5.1E-53 T 14-10-2018 CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 SUPERFAMILY SSF46600 598 637 1.96E-11 T 14-10-2018 IPR036876 UVR domain superfamily CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 Hamap MF_00204 UvrABC system protein B [uvrB]. 1 638 41.49 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 Pfam PF02151 UvrB/uvrC motif 604 637 2.4E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 Gene3D G3DSA:4.10.860.10 598 643 2.2E-18 T 14-10-2018 CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 Gene3D G3DSA:3.40.50.300 384 565 1.3E-51 T 14-10-2018 CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 SUPERFAMILY SSF52540 3 384 8.0E-132 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 SMART SM00490 429 515 3.0E-20 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 SMART SM00487 1 395 3.1E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 2 636 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 SUPERFAMILY SSF52540 6 547 1.92E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 Pfam PF04851 Type III restriction enzyme, res subunit 9 66 4.6E-7 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 Pfam PF00271 Helicase conserved C-terminal domain 410 513 1.6E-18 T 14-10-2018 IPR001650 Helicase, C-terminal CF65_02480 8c00dcaa5040bb83c78680ac8e581e4f 644 Pfam PF12344 Ultra-violet resistance protein B 521 562 1.3E-20 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CF65_00188 a5932cf7c3bd6ae495777c765a3d4ef5 139 SUPERFAMILY SSF81593 5 130 1.53E-42 T 14-10-2018 CF65_00188 a5932cf7c3bd6ae495777c765a3d4ef5 139 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 11 132 2.5E-29 T 14-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CF65_00188 a5932cf7c3bd6ae495777c765a3d4ef5 139 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 10 133 4.4E-41 T 14-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CF65_00188 a5932cf7c3bd6ae495777c765a3d4ef5 139 Gene3D G3DSA:1.20.120.330 13 135 2.0E-34 T 14-10-2018 CF65_01226 0bdb740d52174ed07c6343be46079484 122 Pfam PF01797 Transposase IS200 like 16 118 8.6E-31 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CF65_01226 0bdb740d52174ed07c6343be46079484 122 SMART SM01321 15 118 3.6E-25 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CF65_01226 0bdb740d52174ed07c6343be46079484 122 Gene3D G3DSA:3.30.70.1290 1 122 1.6E-34 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 CF65_01226 0bdb740d52174ed07c6343be46079484 122 SUPERFAMILY SSF143422 8 116 8.11E-39 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 CF65_02940 ee46baf84d024f994e972c8994572200 217 Pfam PF10144 Bacterial virulence factor haemolysin 2 152 9.5E-64 T 14-10-2018 IPR019305 Uncharacterised protein family Smp CF65_00113 51a6dbb567a861b9bb791614472f2ba4 208 Gene3D G3DSA:3.40.50.2020 2 208 1.0E-70 T 14-10-2018 CF65_00113 51a6dbb567a861b9bb791614472f2ba4 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 1.8E-90 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CF65_00113 51a6dbb567a861b9bb791614472f2ba4 208 SUPERFAMILY SSF53271 4 206 2.49E-64 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like CF65_00113 51a6dbb567a861b9bb791614472f2ba4 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.196 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CF65_00113 51a6dbb567a861b9bb791614472f2ba4 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.6E-63 T 14-10-2018 CF65_02053 cf5b0f4d13d7a0f3facfd38090745fd9 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.1E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_02053 cf5b0f4d13d7a0f3facfd38090745fd9 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.1E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_02053 cf5b0f4d13d7a0f3facfd38090745fd9 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.1E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_02053 cf5b0f4d13d7a0f3facfd38090745fd9 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.1E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_02053 cf5b0f4d13d7a0f3facfd38090745fd9 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.1E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_02053 cf5b0f4d13d7a0f3facfd38090745fd9 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.726 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_02053 cf5b0f4d13d7a0f3facfd38090745fd9 298 Gene3D G3DSA:3.90.226.10 25 286 1.8E-86 T 14-10-2018 CF65_02053 cf5b0f4d13d7a0f3facfd38090745fd9 298 Pfam PF01039 Carboxyl transferase domain 99 240 1.4E-14 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 CF65_02053 cf5b0f4d13d7a0f3facfd38090745fd9 298 SUPERFAMILY SSF52096 25 283 4.04E-86 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CF65_02053 cf5b0f4d13d7a0f3facfd38090745fd9 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 7.6E-150 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CF65_02841 65ab3ace082228e495d89021ad902c5d 521 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 506 1.8E-167 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CF65_02841 65ab3ace082228e495d89021ad902c5d 521 PIRSF PIRSF006446 1 329 1.0E-114 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CF65_02841 65ab3ace082228e495d89021ad902c5d 521 PIRSF PIRSF006446 339 519 2.3E-26 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CF65_01400 6b4fdcc53789108c9874870f657b37e2 161 Pfam PF01467 Cytidylyltransferase-like 5 133 4.3E-22 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CF65_01400 6b4fdcc53789108c9874870f657b37e2 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.3E-51 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CF65_01400 6b4fdcc53789108c9874870f657b37e2 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.3E-51 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CF65_01400 6b4fdcc53789108c9874870f657b37e2 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.3E-51 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CF65_01400 6b4fdcc53789108c9874870f657b37e2 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.3E-51 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CF65_01400 6b4fdcc53789108c9874870f657b37e2 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.3E-51 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CF65_01400 6b4fdcc53789108c9874870f657b37e2 161 Gene3D G3DSA:3.40.50.620 1 160 2.3E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_01400 6b4fdcc53789108c9874870f657b37e2 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 33.726 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CF65_01400 6b4fdcc53789108c9874870f657b37e2 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 156 4.3E-55 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CF65_01400 6b4fdcc53789108c9874870f657b37e2 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 63 7.5E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CF65_01400 6b4fdcc53789108c9874870f657b37e2 161 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 73 2.0E-4 T 14-10-2018 CF65_01400 6b4fdcc53789108c9874870f657b37e2 161 SUPERFAMILY SSF52374 1 155 3.84E-44 T 14-10-2018 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 1.8E-27 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 1.8E-27 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 1.8E-27 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 Pfam PF02096 60Kd inner membrane protein 351 530 1.5E-63 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 PRINTS PR00701 60kDa inner membrane protein signature 247 262 6.0E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 PRINTS PR00701 60kDa inner membrane protein signature 161 181 6.0E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 PRINTS PR00701 60kDa inner membrane protein signature 459 481 6.0E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 PRINTS PR00701 60kDa inner membrane protein signature 214 232 6.0E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 PRINTS PR00701 60kDa inner membrane protein signature 496 519 6.0E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.0E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 PRINTS PR00701 60kDa inner membrane protein signature 321 341 6.0E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 PRINTS PR00701 60kDa inner membrane protein signature 412 435 6.0E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 PRINTS PR00701 60kDa inner membrane protein signature 72 93 6.0E-104 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 Pfam PF14849 YidC periplasmic domain 67 340 1.3E-87 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 Gene3D G3DSA:2.70.98.90 62 330 1.1E-92 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 530 3.6E-73 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 25.854 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 CF65_03011 246c6f10db72fc77a719abe9e5a5f5ec 543 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 2.8E-117 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal CF65_01431 195977b68da50408388c76b6ba4265d3 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 14-10-2018 CF65_01431 195977b68da50408388c76b6ba4265d3 272 Gene3D G3DSA:3.30.1240.10 87 191 1.1E-29 T 14-10-2018 CF65_01431 195977b68da50408388c76b6ba4265d3 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 265 5.0E-57 T 14-10-2018 CF65_01431 195977b68da50408388c76b6ba4265d3 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 8 19 - T 14-10-2018 CF65_01431 195977b68da50408388c76b6ba4265d3 272 SUPERFAMILY SSF56784 5 267 2.66E-61 T 14-10-2018 IPR036412 HAD-like superfamily CF65_01431 195977b68da50408388c76b6ba4265d3 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 262 2.3E-48 T 14-10-2018 IPR000150 Cof family GO:0016787 CF65_01431 195977b68da50408388c76b6ba4265d3 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 8 233 4.2E-26 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CF65_00012 ce917adc84d4ba77cbfcb793967f9c5d 89 Pfam PF01381 Helix-turn-helix 24 69 6.5E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CF65_00012 ce917adc84d4ba77cbfcb793967f9c5d 89 SMART SM00530 23 81 1.1E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CF65_00012 ce917adc84d4ba77cbfcb793967f9c5d 89 Gene3D G3DSA:1.10.260.40 12 88 2.6E-11 T 14-10-2018 CF65_00012 ce917adc84d4ba77cbfcb793967f9c5d 89 SUPERFAMILY SSF47413 12 69 8.31E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_00282 d4f15db37ad3e2adf1827174093392a7 210 SUPERFAMILY SSF54534 15 209 9.43E-57 T 14-10-2018 CF65_00282 d4f15db37ad3e2adf1827174093392a7 210 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 6 112 5.1E-24 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CF65_00282 d4f15db37ad3e2adf1827174093392a7 210 Gene3D G3DSA:3.10.50.40 72 210 2.1E-53 T 14-10-2018 CF65_00282 d4f15db37ad3e2adf1827174093392a7 210 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 120 207 7.7E-27 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CF65_00282 d4f15db37ad3e2adf1827174093392a7 210 Gene3D G3DSA:1.10.287.460 9 71 2.6E-14 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 CF65_02076 7c5d6c71b36d4b692b0cc9f1cace87ff 363 Gene3D G3DSA:3.40.50.1820 1 363 5.3E-141 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_02076 7c5d6c71b36d4b692b0cc9f1cace87ff 363 SUPERFAMILY SSF53474 10 360 2.35E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_02375 16b31e3c67622f7eb6913483114f98eb 383 Gene3D G3DSA:3.40.50.720 16 312 6.5E-111 T 14-10-2018 CF65_02375 16b31e3c67622f7eb6913483114f98eb 383 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 201 223 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CF65_02375 16b31e3c67622f7eb6913483114f98eb 383 SUPERFAMILY SSF52283 8 138 1.89E-50 T 14-10-2018 CF65_02375 16b31e3c67622f7eb6913483114f98eb 383 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 230 246 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CF65_02375 16b31e3c67622f7eb6913483114f98eb 383 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 295 6.7E-54 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CF65_02375 16b31e3c67622f7eb6913483114f98eb 383 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 155 182 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CF65_02375 16b31e3c67622f7eb6913483114f98eb 383 Gene3D G3DSA:3.40.50.720 110 298 6.5E-111 T 14-10-2018 CF65_02375 16b31e3c67622f7eb6913483114f98eb 383 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 327 2.8E-38 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CF65_02375 16b31e3c67622f7eb6913483114f98eb 383 SUPERFAMILY SSF51735 109 296 2.75E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_00926 15a9d7ac1e8f9c53165a7811dcb8b8bb 104 Gene3D G3DSA:3.30.920.10 1 104 9.0E-29 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CF65_00926 15a9d7ac1e8f9c53165a7811dcb8b8bb 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 102 23.364 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CF65_00926 15a9d7ac1e8f9c53165a7811dcb8b8bb 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CF65_00926 15a9d7ac1e8f9c53165a7811dcb8b8bb 104 Pfam PF01491 Frataxin-like domain 1 97 1.9E-22 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CF65_00926 15a9d7ac1e8f9c53165a7811dcb8b8bb 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 4 102 2.3E-33 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CF65_00926 15a9d7ac1e8f9c53165a7811dcb8b8bb 104 SMART SM01219 1 103 2.4E-44 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CF65_00926 15a9d7ac1e8f9c53165a7811dcb8b8bb 104 SUPERFAMILY SSF55387 1 97 2.09E-29 T 14-10-2018 CF65_00479 909e927f81814b60dabd221f1b60ae3f 265 Pfam PF03609 PTS system sorbose-specific iic component 4 235 7.6E-77 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CF65_00479 909e927f81814b60dabd221f1b60ae3f 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 261 1.1E-104 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CF65_00680 d998130a5e2a06ea15ef25fbc3d237e7 506 Gene3D G3DSA:1.20.1730.10 23 505 4.9E-95 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily CF65_00680 d998130a5e2a06ea15ef25fbc3d237e7 506 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 425 445 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site CF65_00680 d998130a5e2a06ea15ef25fbc3d237e7 506 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 443 2.7E-117 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CF65_00680 d998130a5e2a06ea15ef25fbc3d237e7 506 Pfam PF00474 Sodium:solute symporter family 35 443 9.7E-133 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CF65_00680 d998130a5e2a06ea15ef25fbc3d237e7 506 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 502 1.5E-202 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CF65_02151 9c1753da69b702122d55745d65e03a06 277 SUPERFAMILY SSF56935 30 212 1.05E-45 T 14-10-2018 CF65_02151 9c1753da69b702122d55745d65e03a06 277 Gene3D G3DSA:2.170.130.10 20 164 4.0E-38 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_02151 9c1753da69b702122d55745d65e03a06 277 Gene3D G3DSA:2.40.170.20 170 214 6.4E-9 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_02151 9c1753da69b702122d55745d65e03a06 277 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 159 8.8E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain CF65_01368 553aac8eb17eda40a38c9650c55f4ed6 116 Pfam PF01245 Ribosomal protein L19 3 113 3.2E-48 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01368 553aac8eb17eda40a38c9650c55f4ed6 116 SUPERFAMILY SSF50104 2 114 3.91E-46 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily CF65_01368 553aac8eb17eda40a38c9650c55f4ed6 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01368 553aac8eb17eda40a38c9650c55f4ed6 116 Gene3D G3DSA:2.30.30.790 2 115 6.8E-18 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01368 553aac8eb17eda40a38c9650c55f4ed6 116 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01368 553aac8eb17eda40a38c9650c55f4ed6 116 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01368 553aac8eb17eda40a38c9650c55f4ed6 116 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01368 553aac8eb17eda40a38c9650c55f4ed6 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 29.92 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01368 553aac8eb17eda40a38c9650c55f4ed6 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.1E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01368 553aac8eb17eda40a38c9650c55f4ed6 116 PIRSF PIRSF002191 1 116 4.4E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02423 5464a1d70e6691de3bfc106d962b1a3f 357 Pfam PF00953 Glycosyl transferase family 4 70 230 5.6E-29 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CF65_02423 5464a1d70e6691de3bfc106d962b1a3f 357 ProSitePatterns PS01348 MraY family signature 2. 145 156 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_02423 5464a1d70e6691de3bfc106d962b1a3f 357 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 4 346 1.4E-163 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 CF65_02423 5464a1d70e6691de3bfc106d962b1a3f 357 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 348 28.003 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 CF65_01051 9c01ef0fb05a6118999f2f9df50ca7cc 350 Pfam PF00005 ABC transporter 21 167 3.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01051 9c01ef0fb05a6118999f2f9df50ca7cc 350 SUPERFAMILY SSF52540 5 243 1.09E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01051 9c01ef0fb05a6118999f2f9df50ca7cc 350 SUPERFAMILY SSF50331 270 345 1.02E-6 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CF65_01051 9c01ef0fb05a6118999f2f9df50ca7cc 350 Gene3D G3DSA:2.40.50.450 244 287 1.1E-7 T 14-10-2018 CF65_01051 9c01ef0fb05a6118999f2f9df50ca7cc 350 SMART SM00382 30 217 1.1E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_01051 9c01ef0fb05a6118999f2f9df50ca7cc 350 Gene3D G3DSA:3.40.50.300 4 243 1.3E-74 T 14-10-2018 CF65_01051 9c01ef0fb05a6118999f2f9df50ca7cc 350 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_01944 0201ca236f8dbe3c1681918e993ed333 282 Pfam PF02661 Fic/DOC family 91 189 2.5E-22 T 14-10-2018 IPR003812 Fido domain CF65_01944 0201ca236f8dbe3c1681918e993ed333 282 Gene3D G3DSA:1.10.3290.10 1 248 1.3E-67 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_01944 0201ca236f8dbe3c1681918e993ed333 282 SUPERFAMILY SSF140931 66 243 1.57E-42 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_02031 9ab74150eb3a258f37a4a8a41f3bef8e 246 Gene3D G3DSA:3.40.50.150 82 224 2.0E-12 T 14-10-2018 CF65_02031 9ab74150eb3a258f37a4a8a41f3bef8e 246 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CF65_02031 9ab74150eb3a258f37a4a8a41f3bef8e 246 SUPERFAMILY SSF53335 87 141 1.52E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00126 463fef83e8a79963a34effedbc303e42 281 Pfam PF05675 Protein of unknown function (DUF817) 27 263 7.8E-99 T 14-10-2018 IPR008535 Protein of unknown function DUF817 CF65_00126 463fef83e8a79963a34effedbc303e42 281 PIRSF PIRSF009141 16 281 2.4E-124 T 14-10-2018 IPR008535 Protein of unknown function DUF817 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 153 169 1.3E-106 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 179 193 1.3E-106 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 197 216 1.3E-106 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 278 297 1.3E-106 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 98 1.3E-106 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 323 349 1.3E-106 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 61 77 1.3E-106 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 135 1.3E-106 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 234 253 1.3E-106 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 106 120 1.3E-106 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 Pfam PF13416 Bacterial extracellular solute-binding protein 71 344 2.8E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein CF65_02721 520c1834b0aad698ea5e18f79112a547 378 PIRSF PIRSF019574 14 378 1.8E-112 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 Gene3D G3DSA:3.40.190.10 162 351 1.0E-107 T 14-10-2018 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 SUPERFAMILY SSF53850 56 375 9.93E-86 T 14-10-2018 CF65_02721 520c1834b0aad698ea5e18f79112a547 378 Gene3D G3DSA:3.40.190.10 60 345 1.0E-107 T 14-10-2018 CF65_02658 b257c58de116eb5f2d88933444857ef6 84 SUPERFAMILY SSF143011 1 83 1.01E-28 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_02658 b257c58de116eb5f2d88933444857ef6 84 Gene3D G3DSA:3.30.2310.20 1 84 4.6E-40 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_02658 b257c58de116eb5f2d88933444857ef6 84 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 8.9E-36 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 CF65_02658 b257c58de116eb5f2d88933444857ef6 84 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 5.5E-41 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 CF65_00586 cbb91ffb93e878d7ebac56495dc190d4 122 SUPERFAMILY SSF100950 24 105 3.45E-13 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_00586 cbb91ffb93e878d7ebac56495dc190d4 122 SMART SM01134 1 103 6.2E-8 T 14-10-2018 CF65_00586 cbb91ffb93e878d7ebac56495dc190d4 122 Pfam PF00455 DeoR C terminal sensor domain 2 101 4.9E-24 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain CF65_02784 c8ecb4accb94ae463a169f8ca496cd5b 873 Pfam PF00171 Aldehyde dehydrogenase family 12 414 3.9E-27 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CF65_02784 c8ecb4accb94ae463a169f8ca496cd5b 873 Gene3D G3DSA:3.40.50.1970 461 651 3.3E-60 T 14-10-2018 CF65_02784 c8ecb4accb94ae463a169f8ca496cd5b 873 Pfam PF00465 Iron-containing alcohol dehydrogenase 468 856 1.0E-110 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CF65_02784 c8ecb4accb94ae463a169f8ca496cd5b 873 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 640 668 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CF65_02784 c8ecb4accb94ae463a169f8ca496cd5b 873 Gene3D G3DSA:1.20.1090.10 652 868 2.4E-62 T 14-10-2018 CF65_02784 c8ecb4accb94ae463a169f8ca496cd5b 873 SUPERFAMILY SSF53720 13 464 3.14E-80 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CF65_02784 c8ecb4accb94ae463a169f8ca496cd5b 873 Gene3D G3DSA:3.40.309.10 224 416 2.4E-173 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CF65_02784 c8ecb4accb94ae463a169f8ca496cd5b 873 Gene3D G3DSA:3.40.605.10 18 455 2.4E-173 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CF65_02784 c8ecb4accb94ae463a169f8ca496cd5b 873 SUPERFAMILY SSF56796 462 867 1.16E-111 T 14-10-2018 CF65_02784 c8ecb4accb94ae463a169f8ca496cd5b 873 PIRSF PIRSF000111 1 869 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 CF65_00815 9a3887cdaf29be1a70e24cc228f092f6 274 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 26 228 1.1E-24 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system CF65_00815 9a3887cdaf29be1a70e24cc228f092f6 274 Gene3D G3DSA:1.20.58.1790 134 239 7.7E-43 T 14-10-2018 CF65_00815 9a3887cdaf29be1a70e24cc228f092f6 274 Gene3D G3DSA:3.10.450.620 9 133 2.8E-46 T 14-10-2018 CF65_01974 00cd220d61f04d8734ce004ad18695ae 147 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 1 147 32.615 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 CF65_01974 00cd220d61f04d8734ce004ad18695ae 147 Pfam PF04217 Protein of unknown function, DUF412 3 145 3.1E-54 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 CF65_02330 687b0232b8fc8fedce50710186457c1c 423 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 408 4.7E-125 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CF65_02330 687b0232b8fc8fedce50710186457c1c 423 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 4.8E-186 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_02330 687b0232b8fc8fedce50710186457c1c 423 Gene3D G3DSA:3.65.10.10 21 230 5.0E-172 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CF65_02330 687b0232b8fc8fedce50710186457c1c 423 SUPERFAMILY SSF55205 1 420 4.45E-145 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CF65_02330 687b0232b8fc8fedce50710186457c1c 423 Gene3D G3DSA:3.65.10.10 8 415 5.0E-172 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CF65_02330 687b0232b8fc8fedce50710186457c1c 423 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 43.955 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CF65_01018 84b0dabe22c369d208ee059dbfe9f5b0 186 Gene3D G3DSA:3.40.1740.10 1 186 1.9E-59 T 14-10-2018 CF65_01018 84b0dabe22c369d208ee059dbfe9f5b0 186 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 2 186 36.627 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 CF65_01018 84b0dabe22c369d208ee059dbfe9f5b0 186 Pfam PF02622 Uncharacterized ACR, COG1678 13 173 2.0E-46 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 CF65_01018 84b0dabe22c369d208ee059dbfe9f5b0 186 SUPERFAMILY SSF143456 2 183 3.4E-61 T 14-10-2018 CF65_01711 a9ff3bf60a4785907fd5e7543b6bd67b 63 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 57 5.7E-5 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CF65_01141 a9aa901479872e0f05993518fcd9723c 204 Pfam PF02613 Nitrate reductase delta subunit 49 163 5.0E-25 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone CF65_01141 a9aa901479872e0f05993518fcd9723c 204 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 4 204 41.201 T 14-10-2018 IPR028611 Tat proofreading chaperone DmsD GO:0005048 CF65_01141 a9aa901479872e0f05993518fcd9723c 204 Gene3D G3DSA:1.10.3480.10 6 204 3.1E-50 T 14-10-2018 CF65_01141 a9aa901479872e0f05993518fcd9723c 204 SUPERFAMILY SSF89155 5 204 1.96E-52 T 14-10-2018 IPR036411 TorD-like superfamily CF65_01141 a9aa901479872e0f05993518fcd9723c 204 PIRSF PIRSF004690 1 204 1.2E-64 T 14-10-2018 IPR026269 Tat proofreading chaperone DmsD-type CF65_00762 b83985adbb8819e975a4fcfaa6862477 245 SUPERFAMILY SSF56935 23 228 2.38E-24 T 14-10-2018 CF65_00762 b83985adbb8819e975a4fcfaa6862477 245 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 168 1.0E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain CF65_00762 b83985adbb8819e975a4fcfaa6862477 245 Gene3D G3DSA:2.40.170.20 185 245 9.8E-7 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_00762 b83985adbb8819e975a4fcfaa6862477 245 Gene3D G3DSA:2.170.130.10 54 184 2.9E-25 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_02939 e5cdac2dde0bf6fafef11da92ba03c1a 314 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 89 307 8.7E-92 T 14-10-2018 CF65_02939 e5cdac2dde0bf6fafef11da92ba03c1a 314 Gene3D G3DSA:3.30.70.2020 5 310 2.2E-111 T 14-10-2018 CF65_02939 e5cdac2dde0bf6fafef11da92ba03c1a 314 Pfam PF00702 haloacid dehalogenase-like hydrolase 104 276 3.4E-18 T 14-10-2018 CF65_02939 e5cdac2dde0bf6fafef11da92ba03c1a 314 Gene3D G3DSA:3.40.50.1000 98 307 2.2E-111 T 14-10-2018 IPR023214 HAD superfamily CF65_02939 e5cdac2dde0bf6fafef11da92ba03c1a 314 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 104 274 8.6E-28 T 14-10-2018 CF65_02939 e5cdac2dde0bf6fafef11da92ba03c1a 314 Gene3D G3DSA:1.10.150.210 112 174 2.2E-111 T 14-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 CF65_02939 e5cdac2dde0bf6fafef11da92ba03c1a 314 SUPERFAMILY SSF56784 104 307 1.49E-53 T 14-10-2018 IPR036412 HAD-like superfamily CF65_00816 a5b27d9fa6b0a6133e37c9d598b09f7e 262 Gene3D G3DSA:3.60.21.10 1 260 1.3E-63 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like CF65_00816 a5b27d9fa6b0a6133e37c9d598b09f7e 262 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 2 248 38.095 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CF65_00816 a5b27d9fa6b0a6133e37c9d598b09f7e 262 Pfam PF00149 Calcineurin-like phosphoesterase 2 193 8.3E-17 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CF65_00816 a5b27d9fa6b0a6133e37c9d598b09f7e 262 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 193 248 2.0E-20 T 14-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 CF65_00816 a5b27d9fa6b0a6133e37c9d598b09f7e 262 SUPERFAMILY SSF56300 2 257 1.31E-58 T 14-10-2018 CF65_02437 87714737613a4e93c633710d22ebe369 476 Pfam PF04945 YHS domain 415 461 2.5E-15 T 14-10-2018 IPR007029 YHS domain CF65_02437 87714737613a4e93c633710d22ebe369 476 Pfam PF10080 Predicted membrane protein (DUF2318) 304 407 8.0E-29 T 14-10-2018 IPR018758 Domain of unknown function DUF2318, membrane CF65_01358 79cc5b449e801b9d306301e99d573947 102 SUPERFAMILY SSF102829 7 85 4.71E-20 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily CF65_01358 79cc5b449e801b9d306301e99d573947 102 Gene3D G3DSA:1.10.20.30 1 48 1.8E-17 T 14-10-2018 CF65_01358 79cc5b449e801b9d306301e99d573947 102 Pfam PF05164 Cell division protein ZapA 7 77 2.4E-16 T 14-10-2018 IPR007838 Cell division protein ZapA-like CF65_01962 75533cfeefd54a935c218240622ffdda 809 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 80 776 1.5E-218 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CF65_01962 75533cfeefd54a935c218240622ffdda 809 Pfam PF00753 Metallo-beta-lactamase superfamily 557 745 2.1E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase CF65_01962 75533cfeefd54a935c218240622ffdda 809 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 234 427 5.2E-41 T 14-10-2018 IPR004477 ComEC/Rec2-related protein CF65_01962 75533cfeefd54a935c218240622ffdda 809 Gene3D G3DSA:3.60.15.10 550 792 7.9E-50 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CF65_01962 75533cfeefd54a935c218240622ffdda 809 Pfam PF03772 Competence protein 213 488 6.4E-50 T 14-10-2018 IPR004477 ComEC/Rec2-related protein CF65_01962 75533cfeefd54a935c218240622ffdda 809 SMART SM00849 560 747 1.1E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase CF65_01962 75533cfeefd54a935c218240622ffdda 809 SUPERFAMILY SSF56281 549 799 1.23E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CF65_01962 75533cfeefd54a935c218240622ffdda 809 Pfam PF13567 Domain of unknown function (DUF4131) 34 179 1.5E-8 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 CF65_01370 ac8814e269a9376d7dfc548d36776520 357 Gene3D G3DSA:2.40.10.350 180 257 4.9E-34 T 14-10-2018 CF65_01370 ac8814e269a9376d7dfc548d36776520 357 Pfam PF04085 rod shape-determining protein MreC 125 269 9.2E-37 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CF65_01370 ac8814e269a9376d7dfc548d36776520 357 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 286 5.0E-110 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CF65_01370 ac8814e269a9376d7dfc548d36776520 357 Gene3D G3DSA:2.40.10.340 121 267 4.9E-34 T 14-10-2018 CF65_02439 683e39378525132e298a14fbbe1f095c 379 Pfam PF02687 FtsX-like permease family 284 371 2.6E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CF65_02439 683e39378525132e298a14fbbe1f095c 379 Pfam PF12704 MacB-like periplasmic core domain 26 228 5.2E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain CF65_00444 f2dcd2300da2437b31f15278b5ec8ebb 297 Gene3D G3DSA:3.40.50.300 36 210 2.3E-15 T 14-10-2018 CF65_00444 f2dcd2300da2437b31f15278b5ec8ebb 297 SUPERFAMILY SSF52540 44 281 2.78E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00444 f2dcd2300da2437b31f15278b5ec8ebb 297 Pfam PF05621 Bacterial TniB protein 23 276 1.7E-97 T 14-10-2018 IPR008868 Bacterial TniB CF65_01918 ede2252e338535805cf48c8049078428 450 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 57 438 1.7E-154 T 14-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 CF65_01918 ede2252e338535805cf48c8049078428 450 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 446 4.8E-122 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CF65_02801 fbace0053c602b7b6dca74d473126820 298 SUPERFAMILY SSF51658 7 295 3.14E-60 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily CF65_02801 fbace0053c602b7b6dca74d473126820 298 Gene3D G3DSA:3.20.20.150 1 295 3.4E-81 T 14-10-2018 CF65_02801 fbace0053c602b7b6dca74d473126820 298 Pfam PF01261 Xylose isomerase-like TIM barrel 35 250 9.3E-26 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CF65_02801 fbace0053c602b7b6dca74d473126820 298 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 5 295 5.7E-122 T 14-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 CF65_02801 fbace0053c602b7b6dca74d473126820 298 Hamap MF_01672 Inosose dehydratase [iolE]. 1 298 56.511 T 14-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 CF65_00543 c293ba6ed21e9407290c774103be1c3b 347 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 318 3.6E-79 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 CF65_00543 c293ba6ed21e9407290c774103be1c3b 347 Gene3D G3DSA:3.40.50.2000 2 149 3.1E-52 T 14-10-2018 CF65_00543 c293ba6ed21e9407290c774103be1c3b 347 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 345 1.3E-150 T 14-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 CF65_00543 c293ba6ed21e9407290c774103be1c3b 347 SUPERFAMILY SSF53756 1 346 2.2E-94 T 14-10-2018 CF65_00543 c293ba6ed21e9407290c774103be1c3b 347 Gene3D G3DSA:3.40.50.2000 165 347 3.6E-59 T 14-10-2018 CF65_02980 a21f23c850c8145c6938c9a32374b8a4 287 SUPERFAMILY SSF103481 34 133 3.79E-16 T 14-10-2018 CF65_02980 a21f23c850c8145c6938c9a32374b8a4 287 Pfam PF00892 EamA-like transporter family 142 276 6.2E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_02980 a21f23c850c8145c6938c9a32374b8a4 287 Pfam PF00892 EamA-like transporter family 3 130 9.6E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_02980 a21f23c850c8145c6938c9a32374b8a4 287 SUPERFAMILY SSF103481 179 275 5.89E-15 T 14-10-2018 CF65_01234 5aedb77854045c12907c93097ac4e3a7 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.5E-45 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01234 5aedb77854045c12907c93097ac4e3a7 117 SUPERFAMILY SSF53137 3 115 8.29E-50 T 14-10-2018 CF65_01234 5aedb77854045c12907c93097ac4e3a7 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 8.4E-42 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01234 5aedb77854045c12907c93097ac4e3a7 117 Gene3D G3DSA:3.30.420.100 1 117 2.8E-42 T 14-10-2018 CF65_01234 5aedb77854045c12907c93097ac4e3a7 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.249 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01794 5b15a1983677363d4fb100cbe08a491d 301 Gene3D G3DSA:1.10.10.10 7 96 1.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01794 5b15a1983677363d4fb100cbe08a491d 301 Gene3D G3DSA:3.40.190.10 103 287 1.5E-49 T 14-10-2018 CF65_01794 5b15a1983677363d4fb100cbe08a491d 301 SUPERFAMILY SSF46785 2 84 1.47E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_01794 5b15a1983677363d4fb100cbe08a491d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.4E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01794 5b15a1983677363d4fb100cbe08a491d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.4E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01794 5b15a1983677363d4fb100cbe08a491d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.4E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01794 5b15a1983677363d4fb100cbe08a491d 301 SUPERFAMILY SSF53850 95 293 9.15E-37 T 14-10-2018 CF65_01794 5b15a1983677363d4fb100cbe08a491d 301 Pfam PF03466 LysR substrate binding domain 94 289 2.7E-31 T 14-10-2018 IPR005119 LysR, substrate-binding CF65_01794 5b15a1983677363d4fb100cbe08a491d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.4E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01794 5b15a1983677363d4fb100cbe08a491d 301 Gene3D G3DSA:3.40.190.10 163 260 1.5E-49 T 14-10-2018 CF65_02021 3129d34d0666f18620c93874ce0c87c0 529 Gene3D G3DSA:3.30.9.10 94 338 4.8E-121 T 14-10-2018 CF65_02021 3129d34d0666f18620c93874ce0c87c0 529 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 407 503 2.0E-23 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CF65_02021 3129d34d0666f18620c93874ce0c87c0 529 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 363 375 1.3E-25 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CF65_02021 3129d34d0666f18620c93874ce0c87c0 529 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 16 28 1.3E-25 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CF65_02021 3129d34d0666f18620c93874ce0c87c0 529 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 29 39 1.3E-25 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CF65_02021 3129d34d0666f18620c93874ce0c87c0 529 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 57 1.3E-25 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CF65_02021 3129d34d0666f18620c93874ce0c87c0 529 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 90 102 1.3E-25 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CF65_02021 3129d34d0666f18620c93874ce0c87c0 529 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 331 337 1.3E-25 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CF65_02021 3129d34d0666f18620c93874ce0c87c0 529 Gene3D G3DSA:1.10.8.870 397 523 2.2E-26 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CF65_02021 3129d34d0666f18620c93874ce0c87c0 529 SUPERFAMILY SSF51905 16 341 4.79E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_02021 3129d34d0666f18620c93874ce0c87c0 529 Pfam PF01266 FAD dependent oxidoreductase 17 375 5.4E-45 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CF65_02021 3129d34d0666f18620c93874ce0c87c0 529 Gene3D G3DSA:3.50.50.60 17 382 4.8E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01538 06da42171602871dc7d03853ab93724d 376 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 372 42.242 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 CF65_01538 06da42171602871dc7d03853ab93724d 376 Gene3D G3DSA:3.30.420.40 11 367 1.8E-131 T 14-10-2018 CF65_01538 06da42171602871dc7d03853ab93724d 376 SUPERFAMILY SSF53067 5 345 2.59E-28 T 14-10-2018 CF65_01538 06da42171602871dc7d03853ab93724d 376 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 4 372 6.8E-169 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 CF65_01538 06da42171602871dc7d03853ab93724d 376 Gene3D G3DSA:3.30.420.40 144 332 1.8E-131 T 14-10-2018 CF65_02470 4f1e741c1cea58e54ff3c729f5554183 295 Gene3D G3DSA:3.30.420.40 6 284 1.1E-82 T 14-10-2018 CF65_02470 4f1e741c1cea58e54ff3c729f5554183 295 Gene3D G3DSA:3.30.420.40 119 271 1.1E-82 T 14-10-2018 CF65_02470 4f1e741c1cea58e54ff3c729f5554183 295 SUPERFAMILY SSF53067 2 290 3.89E-54 T 14-10-2018 CF65_02470 4f1e741c1cea58e54ff3c729f5554183 295 Pfam PF00480 ROK family 4 289 1.6E-85 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CF65_02470 4f1e741c1cea58e54ff3c729f5554183 295 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 2 291 45.532 T 14-10-2018 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 CF65_02005 29cf73c11a5c48913751cb25d924cca2 266 Pfam PF02698 DUF218 domain 95 206 2.7E-12 T 14-10-2018 IPR003848 Domain of unknown function DUF218 CF65_02244 640b2f7eccd170062a01e721697ed166 298 Gene3D G3DSA:1.20.120.1870 166 294 7.0E-15 T 14-10-2018 CF65_02244 640b2f7eccd170062a01e721697ed166 298 SUPERFAMILY SSF140931 214 293 3.14E-7 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_02244 640b2f7eccd170062a01e721697ed166 298 Pfam PF02661 Fic/DOC family 168 248 2.6E-9 T 14-10-2018 IPR003812 Fido domain CF65_02244 640b2f7eccd170062a01e721697ed166 298 Pfam PF13310 Virulence protein RhuM family 30 98 1.1E-27 T 14-10-2018 IPR011204 Virulence protein RhuM-like CF65_01096 4980f810c23864dc492156214370f30b 97 Pfam PF01909 Nucleotidyltransferase domain 12 86 1.8E-9 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CF65_01096 4980f810c23864dc492156214370f30b 97 SUPERFAMILY SSF81301 2 95 3.02E-19 T 14-10-2018 CF65_01096 4980f810c23864dc492156214370f30b 97 Gene3D G3DSA:3.30.460.10 1 97 8.6E-30 T 14-10-2018 CF65_01914 7da7a201ea4030af47ec4e5c9530b17b 88 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 88 1.6E-29 T 14-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin CF65_01914 7da7a201ea4030af47ec4e5c9530b17b 88 TIGRFAM TIGR00053 TIGR00053: addiction module toxin component, YafQ family 5 88 5.8E-28 T 14-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin CF65_01914 7da7a201ea4030af47ec4e5c9530b17b 88 SUPERFAMILY SSF143011 3 87 2.35E-22 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_01914 7da7a201ea4030af47ec4e5c9530b17b 88 Gene3D G3DSA:3.30.2310.20 1 88 4.4E-29 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_01914 7da7a201ea4030af47ec4e5c9530b17b 88 PIRSF PIRSF006156 2 88 3.2E-24 T 14-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin CF65_01914 7da7a201ea4030af47ec4e5c9530b17b 88 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 87 9.9E-22 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CF65_00007 f11ad5aeb0440dedc101bbd6cef59764 191 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 52 190 2.1E-32 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CF65_00007 f11ad5aeb0440dedc101bbd6cef59764 191 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 179 190 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CF65_00007 f11ad5aeb0440dedc101bbd6cef59764 191 SUPERFAMILY SSF49329 41 191 7.85E-50 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CF65_00007 f11ad5aeb0440dedc101bbd6cef59764 191 Gene3D G3DSA:2.60.40.200 38 191 9.4E-49 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CF65_00007 f11ad5aeb0440dedc101bbd6cef59764 191 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 82 92 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CF65_01546 fc0d2c1534a2c33cd76aba7fd64013a4 249 Pfam PF08220 DeoR-like helix-turn-helix domain 8 54 7.1E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_01546 fc0d2c1534a2c33cd76aba7fd64013a4 249 Pfam PF00455 DeoR C terminal sensor domain 76 233 1.8E-36 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain CF65_01546 fc0d2c1534a2c33cd76aba7fd64013a4 249 SMART SM01134 74 235 6.1E-44 T 14-10-2018 CF65_01546 fc0d2c1534a2c33cd76aba7fd64013a4 249 SUPERFAMILY SSF100950 75 234 4.6E-19 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_01546 fc0d2c1534a2c33cd76aba7fd64013a4 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CF65_01546 fc0d2c1534a2c33cd76aba7fd64013a4 249 SMART SM00420 8 57 1.1E-4 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CF65_02371 bb352a7e68941bb85d061e4889d9a88f 386 Pfam PF06969 HemN C-terminal domain 310 372 1.5E-12 T 14-10-2018 IPR010723 HemN, C-terminal CF65_02371 bb352a7e68941bb85d061e4889d9a88f 386 SUPERFAMILY SSF102114 9 384 1.83E-109 T 14-10-2018 CF65_02371 bb352a7e68941bb85d061e4889d9a88f 386 SMART SM00729 10 231 8.7E-50 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CF65_02371 bb352a7e68941bb85d061e4889d9a88f 386 Pfam PF04055 Radical SAM superfamily 15 186 1.9E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CF65_02371 bb352a7e68941bb85d061e4889d9a88f 386 Gene3D G3DSA:3.80.30.20 3 304 1.7E-95 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CF65_02371 bb352a7e68941bb85d061e4889d9a88f 386 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 11 376 1.5E-154 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 CF65_00712 76e38c824ee54d3e81a92e00c3cdf9fe 173 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 14 170 4.0E-45 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CF65_00712 76e38c824ee54d3e81a92e00c3cdf9fe 173 Pfam PF07743 HSCB C-terminal oligomerisation domain 90 164 2.6E-20 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CF65_00712 76e38c824ee54d3e81a92e00c3cdf9fe 173 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 2 171 23.352 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CF65_00712 76e38c824ee54d3e81a92e00c3cdf9fe 173 SUPERFAMILY SSF46565 3 69 6.54E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily CF65_00712 76e38c824ee54d3e81a92e00c3cdf9fe 173 SUPERFAMILY SSF47144 84 172 5.75E-25 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CF65_00712 76e38c824ee54d3e81a92e00c3cdf9fe 173 Gene3D G3DSA:1.10.287.110 1 73 1.8E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily CF65_00712 76e38c824ee54d3e81a92e00c3cdf9fe 173 Gene3D G3DSA:1.20.1280.20 81 172 5.1E-25 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CF65_00712 76e38c824ee54d3e81a92e00c3cdf9fe 173 SMART SM00271 2 67 6.4E-5 T 14-10-2018 IPR001623 DnaJ domain CF65_01747 16bcc17244a4aebda098200e5045119d 564 Pfam PF01368 DHH family 60 188 2.0E-9 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CF65_01747 16bcc17244a4aebda098200e5045119d 564 Gene3D G3DSA:3.90.1640.30 34 311 1.3E-89 T 14-10-2018 CF65_01747 16bcc17244a4aebda098200e5045119d 564 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 12 557 1.0E-161 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CF65_01747 16bcc17244a4aebda098200e5045119d 564 Gene3D G3DSA:3.10.310.30 313 442 2.9E-32 T 14-10-2018 CF65_01747 16bcc17244a4aebda098200e5045119d 564 Pfam PF02272 DHHA1 domain 307 437 3.0E-28 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CF65_01747 16bcc17244a4aebda098200e5045119d 564 SUPERFAMILY SSF64182 35 452 9.94E-119 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily CF65_01301 09ac3f9de1b73ecdf024b2acf4d932a0 183 PIRSF PIRSF020785 12 182 1.8E-33 T 14-10-2018 IPR016778 Competence protein ComB CF65_01301 09ac3f9de1b73ecdf024b2acf4d932a0 183 Pfam PF05137 Fimbrial assembly protein (PilN) 120 179 1.2E-5 T 14-10-2018 IPR007813 Fimbrial assembly PilN CF65_01331 7d759055f04d6761d86fb41b0332521a 78 Gene3D G3DSA:2.30.170.50 9 78 2.1E-34 T 14-10-2018 CF65_01331 7d759055f04d6761d86fb41b0332521a 78 Pfam PF01197 Ribosomal protein L31 9 73 2.0E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01331 7d759055f04d6761d86fb41b0332521a 78 TIGRFAM TIGR00105 L31: ribosomal protein bL31 9 73 8.7E-36 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01331 7d759055f04d6761d86fb41b0332521a 78 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 9 76 31.98 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01331 7d759055f04d6761d86fb41b0332521a 78 ProSitePatterns PS01143 Ribosomal protein L31 signature. 43 64 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01331 7d759055f04d6761d86fb41b0332521a 78 PRINTS PR01249 Ribosomal protein L31 signature 10 27 5.6E-24 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01331 7d759055f04d6761d86fb41b0332521a 78 PRINTS PR01249 Ribosomal protein L31 signature 39 54 5.6E-24 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01331 7d759055f04d6761d86fb41b0332521a 78 PRINTS PR01249 Ribosomal protein L31 signature 54 72 5.6E-24 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_01331 7d759055f04d6761d86fb41b0332521a 78 SUPERFAMILY SSF143800 9 74 8.63E-29 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02321 af1729d1c0977693525aeeb2829f7248 172 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 3 164 25.806 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CF65_02321 af1729d1c0977693525aeeb2829f7248 172 Gene3D G3DSA:2.60.450.10 23 161 6.5E-46 T 14-10-2018 CF65_02321 af1729d1c0977693525aeeb2829f7248 172 Pfam PF03968 OstA-like protein 33 145 1.2E-30 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal CF65_02321 af1729d1c0977693525aeeb2829f7248 172 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 23 163 3.7E-50 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CF65_01418 10b99dfeda68102701d114657b69f360 92 Pfam PF04977 Septum formation initiator 11 89 4.4E-28 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC CF65_01418 10b99dfeda68102701d114657b69f360 92 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 34.595 T 14-10-2018 IPR023081 Cell division protein FtsB CF65_02332 8efa0a51dc5613eff3c6f0f51d3577d4 354 Gene3D G3DSA:3.90.550.10 20 247 6.8E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02332 8efa0a51dc5613eff3c6f0f51d3577d4 354 SUPERFAMILY SSF53448 31 177 2.72E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02332 8efa0a51dc5613eff3c6f0f51d3577d4 354 Pfam PF00535 Glycosyl transferase family 2 32 157 2.3E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CF65_02553 ba369469ace5046bcb4a85a67d67ef7f 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CF65_02553 ba369469ace5046bcb4a85a67d67ef7f 90 Gene3D G3DSA:3.30.70.100 2 89 6.8E-28 T 14-10-2018 CF65_02553 ba369469ace5046bcb4a85a67d67ef7f 90 Pfam PF00708 Acylphosphatase 5 88 7.9E-25 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CF65_02553 ba369469ace5046bcb4a85a67d67ef7f 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 32 48 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CF65_02553 ba369469ace5046bcb4a85a67d67ef7f 90 SUPERFAMILY SSF54975 2 89 2.05E-26 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CF65_00518 5ece77f5640b64384e95202407d64a46 161 Pfam PF09335 SNARE associated Golgi protein 62 157 1.8E-9 T 14-10-2018 IPR032816 SNARE associated Golgi protein CF65_00518 5ece77f5640b64384e95202407d64a46 161 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 20 134 0.004 T 14-10-2018 IPR020143 Uncharacterised protein family, RP436 CF65_00329 f288feafeeae70e2743f40e50444b892 177 SUPERFAMILY SSF53448 2 170 6.64E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00329 f288feafeeae70e2743f40e50444b892 177 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 173 21.479 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CF65_00329 f288feafeeae70e2743f40e50444b892 177 Pfam PF12804 MobA-like NTP transferase domain 1 144 1.4E-27 T 14-10-2018 IPR025877 MobA-like NTP transferase CF65_00329 f288feafeeae70e2743f40e50444b892 177 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 1 171 4.6E-64 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CF65_00329 f288feafeeae70e2743f40e50444b892 177 Gene3D G3DSA:3.90.550.10 1 176 2.5E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02984 57e6fe973f4033f5896dc8043679aaf4 283 Pfam PF01226 Formate/nitrite transporter 19 277 4.4E-75 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 CF65_02984 57e6fe973f4033f5896dc8043679aaf4 283 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site CF65_02984 57e6fe973f4033f5896dc8043679aaf4 283 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 7.5E-132 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 CF65_02984 57e6fe973f4033f5896dc8043679aaf4 283 Gene3D G3DSA:1.20.1080.10 4 270 8.9E-97 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CF65_02984 57e6fe973f4033f5896dc8043679aaf4 283 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 28 280 8.5E-90 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 CF65_01584 4f581a3e3792bcb871105bb9fdae3232 99 SUPERFAMILY SSF50182 7 68 1.11E-23 T 14-10-2018 IPR010920 LSM domain superfamily CF65_01584 4f581a3e3792bcb871105bb9fdae3232 99 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 1.5E-29 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CF65_01584 4f581a3e3792bcb871105bb9fdae3232 99 Gene3D G3DSA:2.30.30.100 1 72 2.1E-33 T 14-10-2018 CF65_01584 4f581a3e3792bcb871105bb9fdae3232 99 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.485 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CF65_01584 4f581a3e3792bcb871105bb9fdae3232 99 Pfam PF17209 Hfq protein 7 68 3.5E-30 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CF65_01191 04bdeb87be158fc2d3931f367d46564c 453 Gene3D G3DSA:3.40.50.12780 106 338 1.1E-19 T 14-10-2018 CF65_01191 04bdeb87be158fc2d3931f367d46564c 453 Gene3D G3DSA:3.40.50.980 9 98 3.8E-5 T 14-10-2018 CF65_01191 04bdeb87be158fc2d3931f367d46564c 453 Gene3D G3DSA:3.30.300.30 340 442 3.3E-11 T 14-10-2018 CF65_01191 04bdeb87be158fc2d3931f367d46564c 453 SUPERFAMILY SSF56801 14 448 4.71E-50 T 14-10-2018 CF65_01191 04bdeb87be158fc2d3931f367d46564c 453 Pfam PF00501 AMP-binding enzyme 17 293 5.1E-14 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CF65_00268 11f30c531eb94d8dc1340a1d21e26054 76 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 74 0.004 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CF65_00268 11f30c531eb94d8dc1340a1d21e26054 76 SUPERFAMILY SSF47336 3 75 7.2E-25 T 14-10-2018 IPR036736 ACP-like superfamily CF65_00268 11f30c531eb94d8dc1340a1d21e26054 76 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site CF65_00268 11f30c531eb94d8dc1340a1d21e26054 76 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 1.8E-38 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CF65_00268 11f30c531eb94d8dc1340a1d21e26054 76 Pfam PF00550 Phosphopantetheine attachment site 5 72 9.4E-18 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain CF65_00268 11f30c531eb94d8dc1340a1d21e26054 76 Gene3D G3DSA:1.10.1200.10 1 76 9.6E-32 T 14-10-2018 IPR036736 ACP-like superfamily CF65_00268 11f30c531eb94d8dc1340a1d21e26054 76 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 23.445 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CF65_02018 c96d954bf1fa1a80dcd8c7bfdede418c 572 Gene3D G3DSA:3.40.50.2300 262 559 2.0E-84 T 14-10-2018 CF65_02018 c96d954bf1fa1a80dcd8c7bfdede418c 572 Gene3D G3DSA:1.25.40.10 25 149 1.7E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_02018 c96d954bf1fa1a80dcd8c7bfdede418c 572 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 4 566 29.485 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA CF65_02018 c96d954bf1fa1a80dcd8c7bfdede418c 572 SUPERFAMILY SSF53822 259 570 3.92E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_02018 c96d954bf1fa1a80dcd8c7bfdede418c 572 Pfam PF04348 LppC putative lipoprotein 40 566 4.3E-223 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA CF65_02018 c96d954bf1fa1a80dcd8c7bfdede418c 572 Gene3D G3DSA:1.25.40.650 150 259 7.5E-35 T 14-10-2018 CF65_02018 c96d954bf1fa1a80dcd8c7bfdede418c 572 Gene3D G3DSA:3.40.50.2300 363 560 2.0E-84 T 14-10-2018 CF65_02532 43131bbdc092c9c07778584b468e76da 788 Gene3D G3DSA:2.170.130.10 24 176 6.1E-9 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_02532 43131bbdc092c9c07778584b468e76da 788 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 171 9.1E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain CF65_02532 43131bbdc092c9c07778584b468e76da 788 Gene3D G3DSA:2.40.170.20 218 788 1.0E-24 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_02532 43131bbdc092c9c07778584b468e76da 788 SUPERFAMILY SSF56935 30 788 3.3E-55 T 14-10-2018 CF65_01751 a3456e18745a29a7d423947235ffc6f2 231 Pfam PF10670 Domain of unknown function (DUF4198) 19 198 4.8E-14 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 CF65_00981 2446c73256b25ed5ca97ffa1de530ae8 351 SUPERFAMILY SSF53474 39 338 1.03E-77 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_00981 2446c73256b25ed5ca97ffa1de530ae8 351 Gene3D G3DSA:3.40.50.1820 34 349 5.3E-100 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_00981 2446c73256b25ed5ca97ffa1de530ae8 351 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 211 226 - T 14-10-2018 IPR019826 Carboxylesterase type B, active site CF65_00981 2446c73256b25ed5ca97ffa1de530ae8 351 Pfam PF00135 Carboxylesterase family 39 338 7.7E-77 T 14-10-2018 IPR002018 Carboxylesterase, type B CF65_00469 595eaf5b13ab8a3811956a74174ee465 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.489 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CF65_00469 595eaf5b13ab8a3811956a74174ee465 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 3.5E-53 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CF65_00469 595eaf5b13ab8a3811956a74174ee465 175 SUPERFAMILY SSF50324 4 175 9.68E-66 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CF65_00469 595eaf5b13ab8a3811956a74174ee465 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CF65_00469 595eaf5b13ab8a3811956a74174ee465 175 Gene3D G3DSA:3.90.80.10 1 175 1.4E-68 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CF65_00794 0724a9b4213eacd5a3c8143090e77671 356 Gene3D G3DSA:3.60.21.10 136 325 7.0E-19 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like CF65_00794 0724a9b4213eacd5a3c8143090e77671 356 Pfam PF00149 Calcineurin-like phosphoesterase 138 299 4.0E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CF65_00794 0724a9b4213eacd5a3c8143090e77671 356 SUPERFAMILY SSF56300 137 353 9.01E-34 T 14-10-2018 CF65_01604 c2a112d660be19ea8a55c90c6902b9ca 131 PIRSF PIRSF016789 11 131 2.1E-35 T 14-10-2018 IPR007401 Protein of unknown function DUF454 CF65_01604 c2a112d660be19ea8a55c90c6902b9ca 131 Pfam PF04304 Protein of unknown function (DUF454) 12 126 7.1E-38 T 14-10-2018 IPR007401 Protein of unknown function DUF454 CF65_00142 b462b08f05a1970f8ba68d6db72854e5 379 SUPERFAMILY SSF110738 1 375 2.62E-140 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 CF65_00142 b462b08f05a1970f8ba68d6db72854e5 379 PIRSF PIRSF006078 1 378 8.7E-139 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CF65_00142 b462b08f05a1970f8ba68d6db72854e5 379 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.1E-160 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CF65_00142 b462b08f05a1970f8ba68d6db72854e5 379 Gene3D G3DSA:3.40.50.10350 1 362 1.7E-141 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold CF65_00142 b462b08f05a1970f8ba68d6db72854e5 379 Gene3D G3DSA:3.90.1510.10 42 276 1.7E-141 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 CF65_00142 b462b08f05a1970f8ba68d6db72854e5 379 Pfam PF02595 Glycerate kinase family 3 373 3.4E-149 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CF65_00876 5eca163b37076a3c7ac9714bfca397b8 288 Pfam PF00482 Type II secretion system (T2SS), protein F 148 276 2.0E-16 T 14-10-2018 IPR018076 Type II secretion system F domain CF65_00125 0645125cdc92a1b931298201d83a6f3a 116 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 19 107 1.1E-22 T 14-10-2018 IPR009241 Toxin HigB-like CF65_00763 e5b35e05dde83bde7345a1646db5d423 594 Gene3D G3DSA:2.40.170.20 1 182 1.0E-9 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_00763 e5b35e05dde83bde7345a1646db5d423 594 Pfam PF00593 TonB dependent receptor 351 594 7.9E-29 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CF65_00763 e5b35e05dde83bde7345a1646db5d423 594 SUPERFAMILY SSF56935 278 594 1.68E-29 T 14-10-2018 CF65_01877 f9d8c43f0776009d8868dca1e1446c12 232 Gene3D G3DSA:3.40.50.150 55 200 6.2E-16 T 14-10-2018 CF65_01877 f9d8c43f0776009d8868dca1e1446c12 232 Pfam PF08241 Methyltransferase domain 83 134 1.6E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CF65_01877 f9d8c43f0776009d8868dca1e1446c12 232 SUPERFAMILY SSF53335 82 195 3.75E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01720 5ca95ac0d9c96de935074a90e00d2aab 42 Pfam PF04266 ASCH domain 5 37 5.2E-5 T 14-10-2018 IPR007374 ASCH domain CF65_01720 5ca95ac0d9c96de935074a90e00d2aab 42 Gene3D G3DSA:2.30.130.30 1 42 3.5E-17 T 14-10-2018 CF65_01720 5ca95ac0d9c96de935074a90e00d2aab 42 SUPERFAMILY SSF88697 1 39 3.48E-11 T 14-10-2018 IPR015947 PUA-like superfamily CF65_00651 ee0ccbe2695d5ac8c86acc4d3d510706 195 SUPERFAMILY SSF54593 5 193 3.26E-60 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CF65_00651 ee0ccbe2695d5ac8c86acc4d3d510706 195 Pfam PF06185 YecM protein 13 193 2.8E-66 T 14-10-2018 IPR010393 Protein of unknown function DUF991 CF65_00651 ee0ccbe2695d5ac8c86acc4d3d510706 195 Gene3D G3DSA:3.10.180.10 3 194 4.2E-57 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CF65_02278 a2f934eb36ed9a39e2c870565284872d 104 PIRSF PIRSF006257 1 104 1.8E-37 T 14-10-2018 IPR007384 Protein of unknown function UCP006257 CF65_02278 a2f934eb36ed9a39e2c870565284872d 104 Gene3D G3DSA:1.20.1440.40 1 102 4.9E-31 T 14-10-2018 IPR036814 YqcC-like superfamily CF65_02278 a2f934eb36ed9a39e2c870565284872d 104 Pfam PF04287 tRNA pseudouridine synthase C 5 99 1.3E-32 T 14-10-2018 IPR023376 YqcC-like domain CF65_02278 a2f934eb36ed9a39e2c870565284872d 104 SUPERFAMILY SSF158452 1 103 4.97E-35 T 14-10-2018 IPR036814 YqcC-like superfamily CF65_02323 ae2b8726d20f4a6ef65affc1a9d32c76 194 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 190 2.7E-57 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related CF65_02323 ae2b8726d20f4a6ef65affc1a9d32c76 194 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 7 189 7.6E-50 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CF65_02323 ae2b8726d20f4a6ef65affc1a9d32c76 194 PIRSF PIRSF028513 4 193 3.6E-36 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CF65_02323 ae2b8726d20f4a6ef65affc1a9d32c76 194 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 6 192 24.293 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CF65_02323 ae2b8726d20f4a6ef65affc1a9d32c76 194 Gene3D G3DSA:2.60.450.10 62 194 1.2E-43 T 14-10-2018 CF65_02541 676390fc3cd60a7e6c1603a78d7cfada 903 Gene3D G3DSA:3.40.50.300 4 253 1.9E-10 T 14-10-2018 CF65_02541 676390fc3cd60a7e6c1603a78d7cfada 903 Pfam PF04851 Type III restriction enzyme, res subunit 13 236 5.7E-29 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CF65_02541 676390fc3cd60a7e6c1603a78d7cfada 903 Gene3D G3DSA:3.40.50.300 254 457 1.8E-23 T 14-10-2018 CF65_02541 676390fc3cd60a7e6c1603a78d7cfada 903 SUPERFAMILY SSF52540 12 255 1.06E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02541 676390fc3cd60a7e6c1603a78d7cfada 903 SUPERFAMILY SSF52540 203 434 5.31E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02675 bb9a4e22cbfd4835ffb80b4d286b7e36 203 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 47 112 2.0E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02675 bb9a4e22cbfd4835ffb80b4d286b7e36 203 Gene3D G3DSA:2.20.25.90 44 113 2.0E-13 T 14-10-2018 CF65_02675 bb9a4e22cbfd4835ffb80b4d286b7e36 203 SMART SM00926 43 112 2.0E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02675 bb9a4e22cbfd4835ffb80b4d286b7e36 203 Gene3D G3DSA:3.40.50.740 115 203 5.1E-29 T 14-10-2018 CF65_02675 bb9a4e22cbfd4835ffb80b4d286b7e36 203 SUPERFAMILY SSF53706 35 202 1.31E-45 T 14-10-2018 CF65_00994 85fcffd83780f3f9d8afcb099da54518 402 Pfam PF03616 Sodium/glutamate symporter 2 367 2.8E-155 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CF65_00994 85fcffd83780f3f9d8afcb099da54518 402 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 398 6.5E-180 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CF65_00994 85fcffd83780f3f9d8afcb099da54518 402 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 1 398 24.156 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CF65_02696 38a823f94016a66d57127231a1e2a0ae 134 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 3 131 1.0E-54 T 14-10-2018 IPR010005 Formate hydrogenlyase maturation HycH CF65_02696 38a823f94016a66d57127231a1e2a0ae 134 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 4 131 1.0E-27 T 14-10-2018 IPR010005 Formate hydrogenlyase maturation HycH CF65_02075 c221df908b33c1a0f0a116f133f89c09 82 Gene3D G3DSA:3.40.50.1820 36 82 2.4E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_02327 e3cbcd9f55e8db99a82f1684396afa3b 213 Pfam PF05494 MlaC protein 37 203 1.8E-45 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CF65_02327 e3cbcd9f55e8db99a82f1684396afa3b 213 PIRSF PIRSF004649 3 213 3.4E-48 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CF65_02327 e3cbcd9f55e8db99a82f1684396afa3b 213 Gene3D G3DSA:3.10.450.710 28 207 3.2E-37 T 14-10-2018 CF65_01994 44e82dd3096f0ca8b5f6a3ce1538e0cf 71 Gene3D G3DSA:1.20.59.10 2 62 3.6E-15 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CF65_01994 44e82dd3096f0ca8b5f6a3ce1538e0cf 71 SMART SM00830 11 63 2.5E-4 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CF65_01994 44e82dd3096f0ca8b5f6a3ce1538e0cf 71 Pfam PF01817 Chorismate mutase type II 11 50 2.1E-12 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CF65_01994 44e82dd3096f0ca8b5f6a3ce1538e0cf 71 SUPERFAMILY SSF48600 2 50 2.29E-14 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CF65_02136 f44e1ac57f7c7b43acf15f0960bc5755 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 2.4E-36 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CF65_02136 f44e1ac57f7c7b43acf15f0960bc5755 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 2.4E-36 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CF65_02136 f44e1ac57f7c7b43acf15f0960bc5755 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 2.4E-36 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CF65_02136 f44e1ac57f7c7b43acf15f0960bc5755 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 2.4E-36 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CF65_02136 f44e1ac57f7c7b43acf15f0960bc5755 396 Gene3D G3DSA:3.40.640.10 60 300 9.8E-163 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_02136 f44e1ac57f7c7b43acf15f0960bc5755 396 Gene3D G3DSA:3.90.1150.10 6 392 9.8E-163 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_02136 f44e1ac57f7c7b43acf15f0960bc5755 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CF65_02136 f44e1ac57f7c7b43acf15f0960bc5755 396 SUPERFAMILY SSF53383 1 396 6.13E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02136 f44e1ac57f7c7b43acf15f0960bc5755 396 Pfam PF00155 Aminotransferase class I and II 27 392 2.3E-94 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CF65_00751 c32c822df6e7eff626aa11856410bfa1 512 Pfam PF00005 ABC transporter 35 183 1.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_00751 c32c822df6e7eff626aa11856410bfa1 512 SUPERFAMILY SSF52540 255 493 5.53E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00751 c32c822df6e7eff626aa11856410bfa1 512 Gene3D G3DSA:3.40.50.300 2 254 2.5E-55 T 14-10-2018 CF65_00751 c32c822df6e7eff626aa11856410bfa1 512 SUPERFAMILY SSF52540 18 238 2.47E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00751 c32c822df6e7eff626aa11856410bfa1 512 SMART SM00382 44 231 1.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00751 c32c822df6e7eff626aa11856410bfa1 512 SMART SM00382 294 489 1.7 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_00751 c32c822df6e7eff626aa11856410bfa1 512 Pfam PF00005 ABC transporter 286 440 1.8E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_00751 c32c822df6e7eff626aa11856410bfa1 512 Gene3D G3DSA:3.40.50.300 255 510 7.1E-40 T 14-10-2018 CF65_00751 c32c822df6e7eff626aa11856410bfa1 512 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_00470 89472cdde0660aa0e6285ec33c0724e4 257 Pfam PF01435 Peptidase family M48 52 241 6.5E-31 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CF65_00682 c6c290a57e66d73432531cfd7c246e42 358 Pfam PF08003 Protein of unknown function (DUF1698) 44 358 1.1E-165 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like CF65_00682 c6c290a57e66d73432531cfd7c246e42 358 SUPERFAMILY SSF53335 124 353 3.08E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00682 c6c290a57e66d73432531cfd7c246e42 358 Gene3D G3DSA:3.40.50.150 138 337 1.3E-21 T 14-10-2018 CF65_00682 c6c290a57e66d73432531cfd7c246e42 358 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 49 358 53.689 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CF65_00682 c6c290a57e66d73432531cfd7c246e42 358 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 44 357 1.4E-144 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CF65_02844 0c615c92112d437174dc79853456e5ea 288 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 2 189 1.4E-101 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CF65_02844 0c615c92112d437174dc79853456e5ea 288 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 2 280 1.1E-139 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CF65_02844 0c615c92112d437174dc79853456e5ea 288 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 207 280 8.9E-32 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CF65_02844 0c615c92112d437174dc79853456e5ea 288 Gene3D G3DSA:3.40.50.300 1 135 2.1E-32 T 14-10-2018 CF65_02844 0c615c92112d437174dc79853456e5ea 288 SUPERFAMILY SSF46785 211 282 8.55E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_02844 0c615c92112d437174dc79853456e5ea 288 SUPERFAMILY SSF52540 3 205 2.68E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02844 0c615c92112d437174dc79853456e5ea 288 SMART SM00382 5 132 6.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02844 0c615c92112d437174dc79853456e5ea 288 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 204 281 2.0E-35 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CF65_02844 0c615c92112d437174dc79853456e5ea 288 Gene3D G3DSA:1.10.8.60 136 210 1.5E-31 T 14-10-2018 CF65_02844 0c615c92112d437174dc79853456e5ea 288 Gene3D G3DSA:1.10.10.10 211 287 3.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02844 0c615c92112d437174dc79853456e5ea 288 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 288 160.116 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CF65_00480 149d505e81cb0221785b624823bde173 278 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 9 277 1.3E-107 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CF65_00480 149d505e81cb0221785b624823bde173 278 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 9 277 5.5E-123 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CF65_01009 fa89740f64b0ef0e471081189a56765d 141 PIRSF PIRSF006276 1 140 2.3E-48 T 14-10-2018 IPR006015 Universal stress protein A CF65_01009 fa89740f64b0ef0e471081189a56765d 141 SUPERFAMILY SSF52402 1 138 8.38E-34 T 14-10-2018 CF65_01009 fa89740f64b0ef0e471081189a56765d 141 Pfam PF00582 Universal stress protein family 1 137 2.1E-21 T 14-10-2018 IPR006016 UspA CF65_01009 fa89740f64b0ef0e471081189a56765d 141 Gene3D G3DSA:3.40.50.620 1 141 1.8E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00177 3f7bb653ae4f8f20bb35a47eb22dc170 90 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 3 77 5.0E-31 T 14-10-2018 IPR010398 Protein of unknown function DUF997 CF65_00177 3f7bb653ae4f8f20bb35a47eb22dc170 90 Pfam PF06196 Protein of unknown function (DUF997) 9 79 1.1E-28 T 14-10-2018 IPR010398 Protein of unknown function DUF997 CF65_02976 bb93865b79188378a9c593d893cdff8e 243 Gene3D G3DSA:3.60.21.10 3 234 5.1E-12 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like CF65_02976 bb93865b79188378a9c593d893cdff8e 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 229 4.2E-99 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CF65_02976 bb93865b79188378a9c593d893cdff8e 243 SUPERFAMILY SSF56300 3 220 8.96E-28 T 14-10-2018 CF65_02976 bb93865b79188378a9c593d893cdff8e 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 239 111.004 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CF65_02976 bb93865b79188378a9c593d893cdff8e 243 Pfam PF00149 Calcineurin-like phosphoesterase 3 199 3.0E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CF65_00260 3525935bb2cf290b6f2188066943356d 102 Gene3D G3DSA:3.30.460.10 1 102 2.6E-33 T 14-10-2018 CF65_00260 3525935bb2cf290b6f2188066943356d 102 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 102 21.218 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CF65_00260 3525935bb2cf290b6f2188066943356d 102 Pfam PF02410 Ribosomal silencing factor during starvation 7 101 1.4E-24 T 14-10-2018 CF65_00260 3525935bb2cf290b6f2188066943356d 102 SUPERFAMILY SSF81301 2 102 6.87E-34 T 14-10-2018 CF65_00260 3525935bb2cf290b6f2188066943356d 102 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 4 101 1.1E-34 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CF65_02610 eb0f4d3cf2f1f024c94a76afa93f4dab 288 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 11 282 5.2E-94 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 CF65_02610 eb0f4d3cf2f1f024c94a76afa93f4dab 288 Gene3D G3DSA:3.10.129.90 2 284 2.3E-95 T 14-10-2018 CF65_02610 eb0f4d3cf2f1f024c94a76afa93f4dab 288 SUPERFAMILY SSF54637 3 113 3.55E-36 T 14-10-2018 IPR029069 HotDog domain superfamily CF65_02610 eb0f4d3cf2f1f024c94a76afa93f4dab 288 SUPERFAMILY SSF54637 115 282 6.4E-52 T 14-10-2018 IPR029069 HotDog domain superfamily CF65_02610 eb0f4d3cf2f1f024c94a76afa93f4dab 288 Pfam PF13622 Thioesterase-like superfamily 31 281 4.0E-50 T 14-10-2018 CF65_00569 b221e292045aaa31523d3453709e8547 104 SUPERFAMILY SSF48179 2 72 7.48E-13 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CF65_00569 b221e292045aaa31523d3453709e8547 104 Gene3D G3DSA:1.10.1040.10 1 102 1.9E-34 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CF65_00569 b221e292045aaa31523d3453709e8547 104 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 2 71 1.7E-8 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CF65_02477 7d59918c9d541d462d6d2be916a7cde7 101 Pfam PF02378 Phosphotransferase system, EIIC 12 96 5.6E-15 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CF65_01900 2536afa3089964dc70b1a997ed7def21 90 Pfam PF10548 P22AR C-terminal domain 1 62 2.4E-13 T 14-10-2018 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal CF65_00614 b9f6c4926c7f97d9df7497548c809916 199 SUPERFAMILY SSF53098 4 197 4.1E-68 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_00614 b9f6c4926c7f97d9df7497548c809916 199 Pfam PF01351 Ribonuclease HII 14 190 2.1E-37 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain CF65_00614 b9f6c4926c7f97d9df7497548c809916 199 Gene3D G3DSA:3.30.420.10 2 199 4.7E-74 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CF65_00614 b9f6c4926c7f97d9df7497548c809916 199 Hamap MF_00052_B Ribonuclease HII [rnhB]. 12 192 37.355 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 CF65_01777 333ffe1501b2634b642d668082077ed5 372 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 349 2.8E-76 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CF65_01777 333ffe1501b2634b642d668082077ed5 372 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 6 352 2.2E-117 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CF65_01104 42e8c631de1e798e10b7ad19d9366650 136 Gene3D G3DSA:2.60.40.1890 30 134 4.7E-27 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily CF65_01104 42e8c631de1e798e10b7ad19d9366650 136 Pfam PF04314 Copper chaperone PCu(A)C 25 128 4.5E-26 T 14-10-2018 IPR007410 Copper chaperone PCuAC CF65_01104 42e8c631de1e798e10b7ad19d9366650 136 SUPERFAMILY SSF110087 4 134 2.62E-33 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily CF65_00899 6771ab9a75bc8ad9a1739f85a795ba01 62 SUPERFAMILY SSF103481 1 59 7.98E-6 T 14-10-2018 CF65_00899 6771ab9a75bc8ad9a1739f85a795ba01 62 Gene3D G3DSA:1.10.3730.20 1 61 7.6E-14 T 14-10-2018 CF65_00899 6771ab9a75bc8ad9a1739f85a795ba01 62 Pfam PF00893 Small Multidrug Resistance protein 1 57 2.0E-10 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CF65_01957 eda5da196e75763c51e84c5226fa2f09 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 23.546 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 CF65_01957 eda5da196e75763c51e84c5226fa2f09 59 Pfam PF03966 Trm112p-like protein 4 41 2.0E-10 T 14-10-2018 IPR005651 Trm112-like CF65_01957 eda5da196e75763c51e84c5226fa2f09 59 Gene3D G3DSA:2.20.25.10 8 59 2.4E-20 T 14-10-2018 CF65_01957 eda5da196e75763c51e84c5226fa2f09 59 SUPERFAMILY SSF158997 1 55 7.59E-18 T 14-10-2018 CF65_02056 81cad2a784ba20a11eb24904f2c72783 448 TIGRFAM TIGR01499 folC: bifunctional protein FolC 30 444 1.9E-95 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CF65_02056 81cad2a784ba20a11eb24904f2c72783 448 SUPERFAMILY SSF53244 291 444 1.58E-25 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CF65_02056 81cad2a784ba20a11eb24904f2c72783 448 Pfam PF08245 Mur ligase middle domain 52 237 2.9E-12 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CF65_02056 81cad2a784ba20a11eb24904f2c72783 448 Gene3D G3DSA:3.90.190.20 306 445 3.8E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CF65_02056 81cad2a784ba20a11eb24904f2c72783 448 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 141 156 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CF65_02056 81cad2a784ba20a11eb24904f2c72783 448 SUPERFAMILY SSF53623 10 289 8.39E-88 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CF65_02056 81cad2a784ba20a11eb24904f2c72783 448 Gene3D G3DSA:3.40.1190.10 2 290 4.6E-87 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CF65_02056 81cad2a784ba20a11eb24904f2c72783 448 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 50 73 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CF65_02056 81cad2a784ba20a11eb24904f2c72783 448 PIRSF PIRSF001563 3 448 2.7E-109 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CF65_01160 f569e958234ac229554c8c3565f67549 182 Gene3D G3DSA:3.90.79.10 7 182 8.8E-46 T 14-10-2018 CF65_01160 f569e958234ac229554c8c3565f67549 182 Pfam PF00293 NUDIX domain 47 139 6.3E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CF65_01160 f569e958234ac229554c8c3565f67549 182 SUPERFAMILY SSF55811 7 179 5.42E-37 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CF65_01159 8ff137e4cd3a4c2706e6f94e43ca5f55 248 Pfam PF13419 Haloacid dehalogenase-like hydrolase 43 219 5.8E-10 T 14-10-2018 CF65_01159 8ff137e4cd3a4c2706e6f94e43ca5f55 248 Gene3D G3DSA:3.40.50.1000 39 234 1.9E-21 T 14-10-2018 IPR023214 HAD superfamily CF65_01159 8ff137e4cd3a4c2706e6f94e43ca5f55 248 SUPERFAMILY SSF56784 36 247 1.68E-35 T 14-10-2018 IPR036412 HAD-like superfamily CF65_01159 8ff137e4cd3a4c2706e6f94e43ca5f55 248 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 109 220 1.1E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 Gene3D G3DSA:3.40.50.460 144 253 3.6E-112 T 14-10-2018 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 Pfam PF00365 Phosphofructokinase 4 277 6.3E-108 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 6.0E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 6.0E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 6.0E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 214 226 6.0E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 6.0E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 6.0E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 6.0E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 6.0E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 6.0E-81 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 321 46.247 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 302 1.2E-125 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 Gene3D G3DSA:3.40.50.450 4 288 3.6E-112 T 14-10-2018 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 SUPERFAMILY SSF53784 3 311 1.09E-114 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CF65_02993 27dd1c60f87458ba792208a77407ae1a 321 PIRSF PIRSF000532 1 320 1.9E-127 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CF65_02904 60591b50507ce0da8e76e7872085a656 88 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 81 3.0E-12 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02904 60591b50507ce0da8e76e7872085a656 88 ProSitePatterns PS01143 Ribosomal protein L31 signature. 50 71 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02904 60591b50507ce0da8e76e7872085a656 88 SUPERFAMILY SSF143800 1 82 3.92E-17 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02904 60591b50507ce0da8e76e7872085a656 88 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 82 25.786 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02904 60591b50507ce0da8e76e7872085a656 88 Gene3D G3DSA:2.30.170.50 1 84 4.8E-16 T 14-10-2018 CF65_02904 60591b50507ce0da8e76e7872085a656 88 Pfam PF01197 Ribosomal protein L31 1 80 1.1E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02904 60591b50507ce0da8e76e7872085a656 88 PRINTS PR01249 Ribosomal protein L31 signature 61 79 5.8E-10 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02904 60591b50507ce0da8e76e7872085a656 88 PRINTS PR01249 Ribosomal protein L31 signature 46 61 5.8E-10 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02904 60591b50507ce0da8e76e7872085a656 88 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.8E-10 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02810 b8513082002d27eb3fb6b722a0bbd921 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 420 51.909 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CF65_02810 b8513082002d27eb3fb6b722a0bbd921 420 Gene3D G3DSA:3.90.1150.10 10 396 4.8E-184 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_02810 b8513082002d27eb3fb6b722a0bbd921 420 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.1E-187 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CF65_02810 b8513082002d27eb3fb6b722a0bbd921 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CF65_02810 b8513082002d27eb3fb6b722a0bbd921 420 Gene3D G3DSA:3.40.640.10 37 289 4.8E-184 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_02810 b8513082002d27eb3fb6b722a0bbd921 420 PIRSF PIRSF000412 1 420 1.5E-168 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CF65_02810 b8513082002d27eb3fb6b722a0bbd921 420 SUPERFAMILY SSF53383 6 419 7.48E-177 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02515 adb2671b3c6391d73c9b842f10154c3a 174 Pfam PF00258 Flavodoxin 6 160 3.0E-33 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CF65_02515 adb2671b3c6391d73c9b842f10154c3a 174 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.6E-71 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 CF65_02515 adb2671b3c6391d73c9b842f10154c3a 174 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CF65_02515 adb2671b3c6391d73c9b842f10154c3a 174 Gene3D G3DSA:3.40.50.360 2 174 4.5E-56 T 14-10-2018 IPR029039 Flavoprotein-like superfamily CF65_02515 adb2671b3c6391d73c9b842f10154c3a 174 SUPERFAMILY SSF52218 4 170 6.01E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily CF65_02515 adb2671b3c6391d73c9b842f10154c3a 174 PIRSF PIRSF038996 1 172 1.9E-67 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 CF65_02350 25a84b0e184825833e3c137b91cb0139 234 Gene3D G3DSA:3.30.530.50 93 202 1.4E-7 T 14-10-2018 CF65_02350 25a84b0e184825833e3c137b91cb0139 234 Pfam PF06804 NlpB/DapX lipoprotein 30 231 8.4E-39 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein CF65_01826 f2c1a0cc9467e0d01b428aaa3fd2f4f9 321 Pfam PF01032 FecCD transport family 14 315 3.1E-66 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CF65_01826 f2c1a0cc9467e0d01b428aaa3fd2f4f9 321 SUPERFAMILY SSF81345 7 315 9.29E-65 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_01826 f2c1a0cc9467e0d01b428aaa3fd2f4f9 321 Gene3D G3DSA:1.10.3470.10 5 319 3.6E-63 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_02385 69aa22ed8de49e74ab13598b6b620d89 330 Gene3D G3DSA:3.40.190.170 30 330 3.0E-97 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CF65_02385 69aa22ed8de49e74ab13598b6b620d89 330 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 285 7.1E-72 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 CF65_02385 69aa22ed8de49e74ab13598b6b620d89 330 PIRSF PIRSF006470 1 327 1.3E-84 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 CF65_02385 69aa22ed8de49e74ab13598b6b620d89 330 SUPERFAMILY SSF53850 140 283 4.35E-8 T 14-10-2018 CF65_02385 69aa22ed8de49e74ab13598b6b620d89 330 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 310 8.2E-78 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 CF65_02592 ee7f7aab435e500481bff54e2b299c8c 273 Pfam PF03537 Glycoside-hydrolase family GH114 49 266 8.0E-24 T 14-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain CF65_02592 ee7f7aab435e500481bff54e2b299c8c 273 SUPERFAMILY SSF51445 50 265 3.32E-27 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily CF65_02592 ee7f7aab435e500481bff54e2b299c8c 273 Gene3D G3DSA:3.20.20.70 39 272 3.5E-26 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_00357 a85867989ec00416c27ef91fd40748a8 150 Pfam PF01797 Transposase IS200 like 16 129 1.3E-33 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CF65_00357 a85867989ec00416c27ef91fd40748a8 150 SMART SM01321 15 129 3.0E-33 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CF65_00357 a85867989ec00416c27ef91fd40748a8 150 SUPERFAMILY SSF143422 8 130 1.96E-42 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 CF65_00357 a85867989ec00416c27ef91fd40748a8 150 Gene3D G3DSA:3.30.70.1290 8 136 1.4E-39 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 PRINTS PR00166 Aromatic amino acid permease signature 81 101 5.3E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 PRINTS PR00166 Aromatic amino acid permease signature 147 167 5.3E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 PRINTS PR00166 Aromatic amino acid permease signature 281 300 5.3E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 PRINTS PR00166 Aromatic amino acid permease signature 316 334 5.3E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 PRINTS PR00166 Aromatic amino acid permease signature 181 203 5.3E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 PRINTS PR00166 Aromatic amino acid permease signature 220 239 5.3E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 PRINTS PR00166 Aromatic amino acid permease signature 9 32 5.3E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 PRINTS PR00166 Aromatic amino acid permease signature 337 356 5.3E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 PRINTS PR00166 Aromatic amino acid permease signature 36 55 5.3E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 Gene3D G3DSA:1.20.1740.10 3 403 2.2E-6 T 14-10-2018 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 6 382 4.2E-129 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 Pfam PF03222 Tryptophan/tyrosine permease family 2 389 2.3E-124 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CF65_02973 b7207ad6d23778613cd4edbeb93bfabd 404 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 16 32 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CF65_02436 d4884ebe49c32d0d43da26e71c4a03e3 173 PIRSF PIRSF017018 1 173 2.2E-77 T 14-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type CF65_02436 d4884ebe49c32d0d43da26e71c4a03e3 173 Gene3D G3DSA:2.60.40.2480 21 173 2.3E-79 T 14-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily CF65_02436 d4884ebe49c32d0d43da26e71c4a03e3 173 Pfam PF10634 Fe2+ transport protein 23 171 2.7E-72 T 14-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type CF65_01682 63af687d1236e19f477ab1eba3dd80e6 265 TIGRFAM TIGR01581 Mo_ABC_porter: NifC-like ABC-type porter 34 256 8.9E-83 T 14-10-2018 IPR006469 NifC-like ABC-type porter GO:0005215|GO:0016020|GO:0055085 CF65_01682 63af687d1236e19f477ab1eba3dd80e6 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 263 1.2E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01682 63af687d1236e19f477ab1eba3dd80e6 265 SUPERFAMILY SSF161098 13 261 3.92E-46 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01682 63af687d1236e19f477ab1eba3dd80e6 265 Gene3D G3DSA:1.10.3720.10 11 265 3.6E-51 T 14-10-2018 IPR035906 MetI-like superfamily CF65_00245 f03ff97dbe2dbed630e8c6c0d2cf283b 93 Gene3D G3DSA:3.30.2310.20 1 92 1.4E-14 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_00245 f03ff97dbe2dbed630e8c6c0d2cf283b 93 SUPERFAMILY SSF143011 3 85 1.83E-6 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_00245 f03ff97dbe2dbed630e8c6c0d2cf283b 93 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 90 3.9E-11 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CF65_02438 22ed50dc70230961b8e8d295a47ec356 441 Pfam PF02687 FtsX-like permease family 345 431 7.6E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CF65_02438 22ed50dc70230961b8e8d295a47ec356 441 Pfam PF12704 MacB-like periplasmic core domain 18 232 1.4E-6 T 14-10-2018 IPR025857 MacB-like periplasmic core domain CF65_00732 0e5480ed322f65b79f558a040b0c0423 335 Gene3D G3DSA:3.40.50.620 141 324 1.1E-21 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_00732 0e5480ed322f65b79f558a040b0c0423 335 Gene3D G3DSA:3.40.630.30 4 135 2.9E-5 T 14-10-2018 CF65_00732 0e5480ed322f65b79f558a040b0c0423 335 SUPERFAMILY SSF52374 142 332 5.33E-25 T 14-10-2018 CF65_00732 0e5480ed322f65b79f558a040b0c0423 335 SUPERFAMILY SSF55729 26 115 4.48E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase CF65_00732 0e5480ed322f65b79f558a040b0c0423 335 SMART SM00764 143 329 1.4E-131 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CF65_00732 0e5480ed322f65b79f558a040b0c0423 335 PIRSF PIRSF005751 1 334 4.0E-134 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 CF65_00732 0e5480ed322f65b79f558a040b0c0423 335 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 143 199 4.8E-12 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CF65_00732 0e5480ed322f65b79f558a040b0c0423 335 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 3 334 3.8E-158 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 CF65_00732 0e5480ed322f65b79f558a040b0c0423 335 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 117 331 4.0E-99 T 14-10-2018 CF65_00732 0e5480ed322f65b79f558a040b0c0423 335 Pfam PF08218 Citrate lyase ligase C-terminal domain 143 329 1.2E-81 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CF65_01339 89fcdd5994df8464606352da366a08fa 188 SUPERFAMILY SSF46689 4 73 1.89E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01339 89fcdd5994df8464606352da366a08fa 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CF65_01339 89fcdd5994df8464606352da366a08fa 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CF65_01339 89fcdd5994df8464606352da366a08fa 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 1.6E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CF65_01339 89fcdd5994df8464606352da366a08fa 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CF65_01339 89fcdd5994df8464606352da366a08fa 188 Gene3D G3DSA:1.10.357.10 1 188 6.9E-55 T 14-10-2018 CF65_02080 c5346090450030b236697378ee6571e8 657 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02080 c5346090450030b236697378ee6571e8 657 Pfam PF12704 MacB-like periplasmic core domain 281 500 5.7E-37 T 14-10-2018 IPR025857 MacB-like periplasmic core domain CF65_02080 c5346090450030b236697378ee6571e8 657 SUPERFAMILY SSF52540 16 248 6.69E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02080 c5346090450030b236697378ee6571e8 657 SMART SM00382 45 232 2.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02080 c5346090450030b236697378ee6571e8 657 Pfam PF00005 ABC transporter 36 184 2.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02080 c5346090450030b236697378ee6571e8 657 Pfam PF02687 FtsX-like permease family 562 650 9.9E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CF65_02080 c5346090450030b236697378ee6571e8 657 Gene3D G3DSA:3.40.50.300 14 270 6.2E-69 T 14-10-2018 CF65_02212 d38c29017db85d8f3ca74854f13fdea2 329 SUPERFAMILY SSF47240 11 329 7.81E-64 T 14-10-2018 IPR009078 Ferritin-like superfamily CF65_02212 d38c29017db85d8f3ca74854f13fdea2 329 Gene3D G3DSA:1.10.620.20 2 305 5.1E-58 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CF65_02212 d38c29017db85d8f3ca74854f13fdea2 329 Pfam PF00268 Ribonucleotide reductase, small chain 13 286 1.7E-52 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_00311 cf16a7f39c095f4344e2f1d98017ce0d 210 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 185 3.2E-44 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal CF65_00311 cf16a7f39c095f4344e2f1d98017ce0d 210 Gene3D G3DSA:3.40.225.10 2 209 3.0E-61 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CF65_00311 cf16a7f39c095f4344e2f1d98017ce0d 210 SUPERFAMILY SSF53639 6 207 2.94E-58 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CF65_00311 cf16a7f39c095f4344e2f1d98017ce0d 210 SMART SM01007 8 187 2.1E-57 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal CF65_01649 0a6afcaae34a37e6ee9e6ed4728db846 296 Gene3D G3DSA:1.10.3720.10 1 283 3.7E-73 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01649 0a6afcaae34a37e6ee9e6ed4728db846 296 SUPERFAMILY SSF161098 8 296 2.8E-68 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01649 0a6afcaae34a37e6ee9e6ed4728db846 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 285 1.7E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_02905 7885729c064d362e72659919268981d2 186 SUPERFAMILY SSF102405 1 175 1.83E-51 T 14-10-2018 CF65_02905 7885729c064d362e72659919268981d2 186 Pfam PF03641 Possible lysine decarboxylase 42 164 1.8E-31 T 14-10-2018 IPR031100 LOG family CF65_02905 7885729c064d362e72659919268981d2 186 Gene3D G3DSA:3.40.50.450 1 185 1.5E-59 T 14-10-2018 CF65_02905 7885729c064d362e72659919268981d2 186 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 169 1.3E-42 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CF65_00578 3dc785b86e92998f1a4ce777b75eeae5 182 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 61 95 4.0E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CF65_00578 3dc785b86e92998f1a4ce777b75eeae5 182 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 48 6.9E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CF65_00578 3dc785b86e92998f1a4ce777b75eeae5 182 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 107 143 4.6E-12 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CF65_00578 3dc785b86e92998f1a4ce777b75eeae5 182 Gene3D G3DSA:3.30.65.10 3 51 7.0E-8 T 14-10-2018 CF65_00578 3dc785b86e92998f1a4ce777b75eeae5 182 Gene3D G3DSA:3.30.65.10 52 100 2.6E-6 T 14-10-2018 CF65_00578 3dc785b86e92998f1a4ce777b75eeae5 182 SUPERFAMILY SSF57783 11 50 1.87E-12 T 14-10-2018 CF65_00578 3dc785b86e92998f1a4ce777b75eeae5 182 SUPERFAMILY SSF57783 100 140 1.11E-5 T 14-10-2018 CF65_00578 3dc785b86e92998f1a4ce777b75eeae5 182 SUPERFAMILY SSF57783 56 93 1.39E-11 T 14-10-2018 CF65_02779 ee1936483a7ab90395ddaf07f3334adc 99 SMART SM01323 7 91 1.8E-37 T 14-10-2018 IPR003849 Preprotein translocase YajC CF65_02779 ee1936483a7ab90395ddaf07f3334adc 99 Pfam PF02699 Preprotein translocase subunit 11 88 2.8E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC CF65_02779 ee1936483a7ab90395ddaf07f3334adc 99 PRINTS PR01853 Bacterial YajC preprotein translocase signature 29 47 4.5E-14 T 14-10-2018 IPR003849 Preprotein translocase YajC CF65_02779 ee1936483a7ab90395ddaf07f3334adc 99 PRINTS PR01853 Bacterial YajC preprotein translocase signature 9 29 4.5E-14 T 14-10-2018 IPR003849 Preprotein translocase YajC CF65_02779 ee1936483a7ab90395ddaf07f3334adc 99 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 8 91 2.7E-34 T 14-10-2018 IPR003849 Preprotein translocase YajC CF65_02711 5c49488a955c4ed93d6cd8e61f077f49 502 SUPERFAMILY SSF141523 265 420 2.09E-19 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CF65_02711 5c49488a955c4ed93d6cd8e61f077f49 502 Pfam PF03734 L,D-transpeptidase catalytic domain 265 429 9.5E-29 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CF65_02450 25f1eb7b59311d0f4bba293fdc6ca3ad 148 Pfam PF01609 Transposase DDE domain 14 97 3.1E-13 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CF65_02450 25f1eb7b59311d0f4bba293fdc6ca3ad 148 SUPERFAMILY SSF53098 24 113 1.29E-18 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_02052 a3f913cb75281ae68f533ca441a9e409 123 Pfam PF02609 Exonuclease VII small subunit 55 106 1.1E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CF65_02052 a3f913cb75281ae68f533ca441a9e409 123 PIRSF PIRSF006488 43 123 8.7E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CF65_02052 a3f913cb75281ae68f533ca441a9e409 123 SUPERFAMILY SSF116842 49 114 1.05E-19 T 14-10-2018 CF65_02052 a3f913cb75281ae68f533ca441a9e409 123 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 54 109 2.4E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CF65_02052 a3f913cb75281ae68f533ca441a9e409 123 Gene3D G3DSA:1.10.287.1040 48 122 1.4E-21 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 CF65_02052 a3f913cb75281ae68f533ca441a9e409 123 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 54 114 15.434 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CF65_02052 a3f913cb75281ae68f533ca441a9e409 123 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 43 95 1.0E-13 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CF65_01003 dc32545ba77bfb79240b0d3715c7980c 85 PIRSF PIRSF006188 12 83 1.4E-35 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 CF65_01003 dc32545ba77bfb79240b0d3715c7980c 85 SUPERFAMILY SSF158651 12 84 3.66E-29 T 14-10-2018 IPR023202 YejL-like superfamily CF65_01003 dc32545ba77bfb79240b0d3715c7980c 85 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 12 80 2.0E-24 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 CF65_01003 dc32545ba77bfb79240b0d3715c7980c 85 Pfam PF07208 Protein of unknown function (DUF1414) 37 80 2.3E-21 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 CF65_01003 dc32545ba77bfb79240b0d3715c7980c 85 Gene3D G3DSA:1.10.3390.10 12 85 1.1E-29 T 14-10-2018 IPR023202 YejL-like superfamily CF65_01003 dc32545ba77bfb79240b0d3715c7980c 85 Hamap MF_00816 UPF0352 protein YejL [yejL]. 12 82 23.081 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 CF65_00650 d98a74bb34fa3f44d199f8c6a96abeb4 151 Pfam PF05433 Glycine zipper 2TM domain 60 100 8.0E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CF65_01858 ea09507e8b68317a378ced6ddc25c371 253 SUPERFAMILY SSF109604 15 140 1.5E-10 T 14-10-2018 CF65_01858 ea09507e8b68317a378ced6ddc25c371 253 Pfam PF01966 HD domain 21 117 5.1E-8 T 14-10-2018 IPR006674 HD domain CF65_01858 ea09507e8b68317a378ced6ddc25c371 253 Gene3D G3DSA:1.10.3210.30 1 183 2.1E-13 T 14-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily CF65_01858 ea09507e8b68317a378ced6ddc25c371 253 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 19 199 1.4E-29 T 14-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain CF65_01872 f2290d4b872a30b1c17d04b669036017 587 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 12 405 3.0E-163 T 14-10-2018 IPR003776 YcaO-like domain CF65_01872 f2290d4b872a30b1c17d04b669036017 587 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 60 393 4.2E-76 T 14-10-2018 IPR003776 YcaO-like domain CF65_00408 908625058861db08314f9976c4a4994a 451 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 18 449 1.5E-164 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 CF65_00408 908625058861db08314f9976c4a4994a 451 Pfam PF01189 16S rRNA methyltransferase RsmB/F 247 446 9.9E-72 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 CF65_00408 908625058861db08314f9976c4a4994a 451 Gene3D G3DSA:3.40.50.150 238 449 1.0E-64 T 14-10-2018 CF65_00408 908625058861db08314f9976c4a4994a 451 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 329 341 4.5E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CF65_00408 908625058861db08314f9976c4a4994a 451 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 258 268 4.5E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CF65_00408 908625058861db08314f9976c4a4994a 451 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 379 395 4.5E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CF65_00408 908625058861db08314f9976c4a4994a 451 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 229 243 4.5E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CF65_00408 908625058861db08314f9976c4a4994a 451 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 431 448 4.5E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CF65_00408 908625058861db08314f9976c4a4994a 451 Gene3D G3DSA:1.10.940.10 13 153 5.5E-41 T 14-10-2018 IPR035926 NusB-like superfamily CF65_00408 908625058861db08314f9976c4a4994a 451 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 328 339 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 CF65_00408 908625058861db08314f9976c4a4994a 451 SUPERFAMILY SSF53335 149 449 1.52E-65 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00408 908625058861db08314f9976c4a4994a 451 Pfam PF01029 NusB family 16 137 3.3E-25 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CF65_00408 908625058861db08314f9976c4a4994a 451 Gene3D G3DSA:1.10.287.730 155 180 9.9E-8 T 14-10-2018 CF65_00408 908625058861db08314f9976c4a4994a 451 SUPERFAMILY SSF48013 16 158 1.16E-35 T 14-10-2018 IPR035926 NusB-like superfamily CF65_00408 908625058861db08314f9976c4a4994a 451 Gene3D G3DSA:3.30.70.1170 181 237 5.8E-15 T 14-10-2018 CF65_01883 27d36dcdfdf57a8a4b44960fabc58943 429 SUPERFAMILY SSF103473 4 421 1.19E-32 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_01883 27d36dcdfdf57a8a4b44960fabc58943 429 TIGRFAM TIGR00901 2A0125: AmpG-like permease 28 376 7.2E-127 T 14-10-2018 CF65_01883 27d36dcdfdf57a8a4b44960fabc58943 429 Gene3D G3DSA:1.20.1250.20 7 415 3.0E-21 T 14-10-2018 CF65_01883 27d36dcdfdf57a8a4b44960fabc58943 429 Pfam PF07690 Major Facilitator Superfamily 21 376 6.7E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CF65_00667 b92560c34438746795ff624f5793abf8 186 Gene3D G3DSA:2.80.10.50 25 186 6.0E-81 T 14-10-2018 CF65_00667 b92560c34438746795ff624f5793abf8 186 SUPERFAMILY SSF50370 26 178 1.16E-43 T 14-10-2018 IPR035992 Ricin B-like lectins CF65_00667 b92560c34438746795ff624f5793abf8 186 Pfam PF03498 Cytolethal distending toxin A/C domain 40 174 3.9E-36 T 14-10-2018 IPR003558 Cytolethal distending toxin A/C GO:0009405 CF65_02551 d42c2a4c2939c0a29f63f3c6621b722a 285 Gene3D G3DSA:1.10.3470.10 39 268 6.9E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_02551 d42c2a4c2939c0a29f63f3c6621b722a 285 Pfam PF00950 ABC 3 transport family 10 265 1.5E-87 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CF65_02551 d42c2a4c2939c0a29f63f3c6621b722a 285 SUPERFAMILY SSF81345 2 261 3.01E-36 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_00062 dca04f1042fa96ea74b07d5e489043ba 354 Pfam PF07690 Major Facilitator Superfamily 3 315 1.9E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CF65_00062 dca04f1042fa96ea74b07d5e489043ba 354 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 2 350 1.9E-124 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 CF65_00062 dca04f1042fa96ea74b07d5e489043ba 354 Gene3D G3DSA:1.20.1720.10 1 349 8.9E-84 T 14-10-2018 CF65_00062 dca04f1042fa96ea74b07d5e489043ba 354 SUPERFAMILY SSF103473 2 350 8.89E-57 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_01839 967e8f21f05aafa4435511c53a66e1f0 114 Gene3D G3DSA:1.10.10.60 63 104 1.9E-11 T 14-10-2018 CF65_01839 967e8f21f05aafa4435511c53a66e1f0 114 SUPERFAMILY SSF46689 12 102 6.63E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01839 967e8f21f05aafa4435511c53a66e1f0 114 Pfam PF08765 Mor transcription activator family 9 103 3.8E-27 T 14-10-2018 IPR014875 Mor transcription activator CF65_02101 fc425c28f4fe9138fe3a16c3dd8958eb 93 SUPERFAMILY SSF56601 18 83 2.82E-10 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CF65_02101 fc425c28f4fe9138fe3a16c3dd8958eb 93 Gene3D G3DSA:3.40.710.10 12 91 1.1E-10 T 14-10-2018 CF65_02101 fc425c28f4fe9138fe3a16c3dd8958eb 93 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 18 63 2.5E-9 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CF65_00523 d36483b7076eb08ecce50d8e1290621b 126 Pfam PF00874 PRD domain 30 107 3.2E-6 T 14-10-2018 IPR011608 PRD domain GO:0006355 CF65_00523 d36483b7076eb08ecce50d8e1290621b 126 SUPERFAMILY SSF63520 8 115 8.63E-10 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 CF65_00492 78493406c8090d3113c63014ae2a3cb1 360 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 1 359 1.0E-179 T 14-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 CF65_00492 78493406c8090d3113c63014ae2a3cb1 360 Gene3D G3DSA:3.90.550.10 1 212 2.3E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00492 78493406c8090d3113c63014ae2a3cb1 360 SUPERFAMILY SSF53448 1 277 5.25E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00492 78493406c8090d3113c63014ae2a3cb1 360 Pfam PF13641 Glycosyltransferase like family 2 2 221 1.0E-40 T 14-10-2018 CF65_01171 653246f543bc2f8e529df7392d4c872d 230 SUPERFAMILY SSF53681 119 228 1.05E-29 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_01171 653246f543bc2f8e529df7392d4c872d 230 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 192 202 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_01171 653246f543bc2f8e529df7392d4c872d 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 2.1E-63 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CF65_01171 653246f543bc2f8e529df7392d4c872d 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 221 6.1E-48 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_01171 653246f543bc2f8e529df7392d4c872d 230 SUPERFAMILY SSF53681 1 116 1.63E-33 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CF65_01171 653246f543bc2f8e529df7392d4c872d 230 Gene3D G3DSA:3.40.50.1860 4 223 1.9E-73 T 14-10-2018 CF65_01171 653246f543bc2f8e529df7392d4c872d 230 Gene3D G3DSA:3.40.50.1860 104 214 1.9E-73 T 14-10-2018 CF65_01426 bd69e5a5015fcadd5697e97af031d9fa 123 Gene3D G3DSA:3.40.50.1100 38 123 1.1E-36 T 14-10-2018 CF65_01426 bd69e5a5015fcadd5697e97af031d9fa 123 SUPERFAMILY SSF53686 2 122 1.96E-34 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CF65_01426 bd69e5a5015fcadd5697e97af031d9fa 123 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 2 122 1.5E-26 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CF65_01426 bd69e5a5015fcadd5697e97af031d9fa 123 Gene3D G3DSA:3.40.50.1100 1 37 1.1E-36 T 14-10-2018 CF65_02495 43b61c1bd7afdbfc4bd3ded6616b28ab 117 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 93 111 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 CF65_02495 43b61c1bd7afdbfc4bd3ded6616b28ab 117 SUPERFAMILY SSF55298 12 116 3.3E-25 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CF65_02495 43b61c1bd7afdbfc4bd3ded6616b28ab 117 Pfam PF01042 Endoribonuclease L-PSP 5 114 3.4E-25 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CF65_02495 43b61c1bd7afdbfc4bd3ded6616b28ab 117 Gene3D G3DSA:3.30.1330.40 1 117 5.5E-37 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CF65_02619 4420b47cc81ddd95454a0d1d34ef3990 217 SUPERFAMILY SSF142695 4 174 1.96E-64 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CF65_02619 4420b47cc81ddd95454a0d1d34ef3990 217 Gene3D G3DSA:3.40.50.10990 2 176 9.0E-75 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CF65_02619 4420b47cc81ddd95454a0d1d34ef3990 217 Pfam PF00925 GTP cyclohydrolase II 8 172 1.6E-67 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CF65_02619 4420b47cc81ddd95454a0d1d34ef3990 217 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 2 198 46.29 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CF65_02619 4420b47cc81ddd95454a0d1d34ef3990 217 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 196 4.3E-93 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CF65_00786 7cbdc5242d4243566882dc5e7435fe1a 116 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 74 4.6E-27 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CF65_00786 7cbdc5242d4243566882dc5e7435fe1a 116 Pfam PF03840 Preprotein translocase SecG subunit 5 72 7.8E-22 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CF65_00786 7cbdc5242d4243566882dc5e7435fe1a 116 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.4E-43 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CF65_00786 7cbdc5242d4243566882dc5e7435fe1a 116 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.4E-43 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CF65_00786 7cbdc5242d4243566882dc5e7435fe1a 116 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.4E-43 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CF65_00786 7cbdc5242d4243566882dc5e7435fe1a 116 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.4E-43 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CF65_00050 d3790ade767814dd5a0de93da340ca50 307 Gene3D G3DSA:1.25.40.10 154 302 3.7E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00050 d3790ade767814dd5a0de93da340ca50 307 SUPERFAMILY SSF48452 164 272 1.52E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00050 d3790ade767814dd5a0de93da340ca50 307 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 118 2.5E-35 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI CF65_02964 f8902b56223d260c2cab18feaf07958d 437 Pfam PF08525 Opacity-associated protein A N-terminal motif 156 187 2.3E-7 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal CF65_02964 f8902b56223d260c2cab18feaf07958d 437 Gene3D G3DSA:3.10.450.350 346 431 3.5E-5 T 14-10-2018 CF65_02964 f8902b56223d260c2cab18feaf07958d 437 Pfam PF04225 Opacity-associated protein A LysM-like domain 357 437 2.1E-30 T 14-10-2018 IPR007340 Opacity-associated protein A CF65_00201 55bfd85fc71cb54c4c226a8716d1a6c7 265 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 261 19.772 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CF65_00201 55bfd85fc71cb54c4c226a8716d1a6c7 265 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CF65_00201 55bfd85fc71cb54c4c226a8716d1a6c7 265 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 262 5.9E-100 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CF65_00201 55bfd85fc71cb54c4c226a8716d1a6c7 265 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 256 6.7E-79 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CF65_00978 b234c1e23b344a427466d225bb1ab55d 369 SUPERFAMILY SSF53474 76 364 1.87E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_00978 b234c1e23b344a427466d225bb1ab55d 369 Gene3D G3DSA:3.40.50.1820 21 368 5.5E-96 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_00674 69585dc6673258273c553c5b40652ba6 232 Gene3D G3DSA:3.30.1600.10 19 149 1.4E-62 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily CF65_00674 69585dc6673258273c553c5b40652ba6 232 SUPERFAMILY SSF52467 5 225 4.73E-64 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CF65_00674 69585dc6673258273c553c5b40652ba6 232 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 3 227 55.17 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 CF65_00674 69585dc6673258273c553c5b40652ba6 232 Gene3D G3DSA:3.40.50.1220 6 203 1.4E-62 T 14-10-2018 CF65_00674 69585dc6673258273c553c5b40652ba6 232 Pfam PF02146 Sir2 family 10 177 2.9E-49 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 CF65_00875 5d94f28b99fb6d070f70e4d9b6142165 295 Pfam PF00482 Type II secretion system (T2SS), protein F 129 252 1.3E-19 T 14-10-2018 IPR018076 Type II secretion system F domain CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 SUPERFAMILY SSF63867 323 403 5.76E-24 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 Gene3D G3DSA:3.40.980.10 171 323 8.7E-144 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 163 1.0E-42 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 Gene3D G3DSA:2.170.190.11 45 137 8.7E-144 T 14-10-2018 CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 173 309 2.1E-33 T 14-10-2018 IPR001453 MoaB/Mog domain CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 Pfam PF00994 Probable molybdopterin binding domain 176 312 5.0E-28 T 14-10-2018 IPR001453 MoaB/Mog domain CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 Gene3D G3DSA:2.40.340.10 324 394 8.7E-144 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 Gene3D G3DSA:3.90.105.10 21 170 8.7E-144 T 14-10-2018 CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 Pfam PF03454 MoeA C-terminal region (domain IV) 328 399 8.2E-21 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 249 282 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 SMART SM00852 176 313 2.6E-42 T 14-10-2018 IPR001453 MoaB/Mog domain CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 SUPERFAMILY SSF53218 173 318 8.77E-44 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily CF65_01662 8d52db60fe46500bb16fd7e6700c2ae4 404 SUPERFAMILY SSF63882 1 172 1.96E-54 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CF65_02720 8bb41dcd01dde4fa1d2210461d8955b9 257 Gene3D G3DSA:1.10.3720.10 2 256 1.2E-48 T 14-10-2018 IPR035906 MetI-like superfamily CF65_02720 8bb41dcd01dde4fa1d2210461d8955b9 257 SUPERFAMILY SSF161098 3 253 5.61E-54 T 14-10-2018 IPR035906 MetI-like superfamily CF65_02720 8bb41dcd01dde4fa1d2210461d8955b9 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 250 5.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_02146 399cfc2847c1aaf13dc10cbde1f6f81c 190 Pfam PF00005 ABC transporter 45 95 2.1E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02146 399cfc2847c1aaf13dc10cbde1f6f81c 190 Gene3D G3DSA:3.40.50.300 9 183 5.4E-27 T 14-10-2018 CF65_02146 399cfc2847c1aaf13dc10cbde1f6f81c 190 SUPERFAMILY SSF52540 19 135 3.04E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 PIRSF PIRSF500176 23 348 5.8E-85 T 14-10-2018 CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 SUPERFAMILY SSF53774 24 347 7.46E-109 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 PRINTS PR00139 Asparaginase/glutaminase family signature 27 38 1.2E-23 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 PRINTS PR00139 Asparaginase/glutaminase family signature 283 301 1.2E-23 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 PRINTS PR00139 Asparaginase/glutaminase family signature 104 122 1.2E-23 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 29 37 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 Gene3D G3DSA:3.40.50.40 236 349 9.4E-42 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 105 115 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 Gene3D G3DSA:3.40.50.1170 24 235 3.8E-86 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 2 349 5.9E-164 T 14-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 Pfam PF00710 Asparaginase, N-terminal 26 216 6.7E-63 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 SMART SM00870 26 343 3.6E-148 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CF65_00096 1a3b7f4b92ba9567d52bf53472cd2000 349 PIRSF PIRSF001220 21 348 8.2E-96 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CF65_02857 bf6a148ac80048f363430d18ddbb4301 175 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 75 165 1.6E-30 T 14-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 CF65_02857 bf6a148ac80048f363430d18ddbb4301 175 Gene3D G3DSA:1.20.120.1630 1 174 2.9E-16 T 14-10-2018 CF65_01279 6272521eb5803f3de2040ccf43c2bc21 129 Pfam PF04186 FxsA cytoplasmic membrane protein 2 82 2.6E-19 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CF65_01689 b25b55fa9098bcaef679b7a2e557fcee 362 Pfam PF03601 Conserved hypothetical protein 698 33 338 1.1E-108 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CF65_01689 b25b55fa9098bcaef679b7a2e557fcee 362 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 30 355 1.8E-137 T 14-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 2.1E-212 T 14-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 PRINTS PR00688 Xylose isomerase signature 271 298 4.3E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 PRINTS PR00688 Xylose isomerase signature 156 175 4.3E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 PRINTS PR00688 Xylose isomerase signature 180 201 4.3E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 PRINTS PR00688 Xylose isomerase signature 207 226 4.3E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 PRINTS PR00688 Xylose isomerase signature 333 344 4.3E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 PRINTS PR00688 Xylose isomerase signature 133 153 4.3E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 PRINTS PR00688 Xylose isomerase signature 300 311 4.3E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 PRINTS PR00688 Xylose isomerase signature 92 114 4.3E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 PRINTS PR00688 Xylose isomerase signature 229 253 4.3E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 Gene3D G3DSA:3.20.20.150 3 439 3.4E-180 T 14-10-2018 CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 SUPERFAMILY SSF51658 3 438 6.37E-175 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily CF65_01453 12f6cb087aea574c75d6f43a48e948e2 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 52.327 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CF65_00108 3478590e9425126a2b4591ebd1a51ada 204 PIRSF PIRSF006170 1 204 3.2E-63 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 CF65_00108 3478590e9425126a2b4591ebd1a51ada 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 1.3E-48 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 CF65_00108 3478590e9425126a2b4591ebd1a51ada 204 SUPERFAMILY SSF48452 48 196 4.36E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00108 3478590e9425126a2b4591ebd1a51ada 204 Gene3D G3DSA:1.25.40.10 36 202 3.3E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_02523 b91ec8a8e2aaf3dec8a5c4b69fc07215 105 PIRSF PIRSF037511 1 105 1.7E-33 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CF65_02523 b91ec8a8e2aaf3dec8a5c4b69fc07215 105 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 5 105 5.1E-35 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CF65_02523 b91ec8a8e2aaf3dec8a5c4b69fc07215 105 Pfam PF01253 Translation initiation factor SUI1 29 99 9.6E-16 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CF65_02523 b91ec8a8e2aaf3dec8a5c4b69fc07215 105 SUPERFAMILY SSF55159 5 101 5.89E-23 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 CF65_02523 b91ec8a8e2aaf3dec8a5c4b69fc07215 105 Gene3D G3DSA:3.30.780.10 25 105 2.5E-30 T 14-10-2018 CF65_00862 5102bea7b7ae9ca5ba39e9c8721b430f 57 Pfam PF17320 Family of unknown function (DUF5363) 4 54 2.6E-25 T 14-10-2018 IPR035292 Protein of unknown function DUF5363 CF65_00862 5102bea7b7ae9ca5ba39e9c8721b430f 57 ProDom PD052088 HI1257 6 39 2.0E-4 T 14-10-2018 IPR035292 Protein of unknown function DUF5363 CF65_01138 9232082ea5890424e35424df053498ed 205 Gene3D G3DSA:3.30.70.20 1 197 2.2E-52 T 14-10-2018 CF65_01138 9232082ea5890424e35424df053498ed 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 3 163 5.4E-76 T 14-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B CF65_01138 9232082ea5890424e35424df053498ed 205 Pfam PF12800 4Fe-4S binding domain 10 24 6.7E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_01138 9232082ea5890424e35424df053498ed 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_01138 9232082ea5890424e35424df053498ed 205 SUPERFAMILY SSF54862 1 199 1.99E-66 T 14-10-2018 CF65_01138 9232082ea5890424e35424df053498ed 205 Pfam PF13247 4Fe-4S dicluster domain 59 152 2.5E-26 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02348 1f3b2cdbb0a8daa6b1a522356ad03260 154 SUPERFAMILY SSF52833 4 153 2.51E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_02348 1f3b2cdbb0a8daa6b1a522356ad03260 154 PIRSF PIRSF000239 1 142 5.0E-17 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CF65_02348 1f3b2cdbb0a8daa6b1a522356ad03260 154 Pfam PF00578 AhpC/TSA family 7 134 1.4E-35 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CF65_02348 1f3b2cdbb0a8daa6b1a522356ad03260 154 Gene3D G3DSA:3.40.30.10 3 154 3.1E-45 T 14-10-2018 CF65_02587 571653703cdccd059d0b22ed9b1ac845 187 PIRSF PIRSF004690 2 187 2.1E-55 T 14-10-2018 IPR026269 Tat proofreading chaperone DmsD-type CF65_02587 571653703cdccd059d0b22ed9b1ac845 187 Gene3D G3DSA:1.10.3480.10 101 186 9.3E-11 T 14-10-2018 CF65_02587 571653703cdccd059d0b22ed9b1ac845 187 Gene3D G3DSA:1.10.3480.10 1 100 1.2E-6 T 14-10-2018 CF65_02587 571653703cdccd059d0b22ed9b1ac845 187 SUPERFAMILY SSF89155 5 183 5.49E-36 T 14-10-2018 IPR036411 TorD-like superfamily CF65_00642 b4f0bf7763a1a39b7758820559ecd9d7 83 Pfam PF05166 YcgL domain 3 75 2.7E-30 T 14-10-2018 IPR027354 YcgL domain CF65_00642 b4f0bf7763a1a39b7758820559ecd9d7 83 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 83 8.0E-27 T 14-10-2018 IPR027354 YcgL domain CF65_00642 b4f0bf7763a1a39b7758820559ecd9d7 83 Hamap MF_01866 Protein YcgL [ycgL]. 1 80 24.013 T 14-10-2018 IPR027354 YcgL domain CF65_00642 b4f0bf7763a1a39b7758820559ecd9d7 83 SUPERFAMILY SSF160191 1 81 3.01E-33 T 14-10-2018 IPR038068 YcgL-like superfamily CF65_00642 b4f0bf7763a1a39b7758820559ecd9d7 83 Gene3D G3DSA:3.10.510.20 1 74 1.3E-29 T 14-10-2018 IPR038068 YcgL-like superfamily CF65_00092 d7a5217be4eedddaf4fd897ac047b371 413 Pfam PF03222 Tryptophan/tyrosine permease family 21 409 1.5E-16 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CF65_00092 d7a5217be4eedddaf4fd897ac047b371 413 TIGRFAM TIGR00814 stp: serine transporter 9 403 2.0E-171 T 14-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 CF65_00131 02dcff2aa8c0947c96433e948f666388 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_00131 02dcff2aa8c0947c96433e948f666388 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 5.3E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_00131 02dcff2aa8c0947c96433e948f666388 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 5.3E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_00131 02dcff2aa8c0947c96433e948f666388 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 5.3E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_00131 02dcff2aa8c0947c96433e948f666388 128 Pfam PF00376 MerR family regulatory protein 2 39 4.6E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_00131 02dcff2aa8c0947c96433e948f666388 128 Pfam PF09278 MerR, DNA binding 44 107 2.3E-19 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding CF65_00131 02dcff2aa8c0947c96433e948f666388 128 Gene3D G3DSA:1.10.1660.10 1 124 1.7E-34 T 14-10-2018 CF65_00131 02dcff2aa8c0947c96433e948f666388 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.9E-44 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 CF65_00131 02dcff2aa8c0947c96433e948f666388 128 SUPERFAMILY SSF46955 1 126 3.66E-36 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily CF65_00131 02dcff2aa8c0947c96433e948f666388 128 SMART SM00422 1 70 2.4E-31 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 2.0E-27 T 14-10-2018 IPR000362 Fumarate lyase family CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 2.0E-27 T 14-10-2018 IPR000362 Fumarate lyase family CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 2.0E-27 T 14-10-2018 IPR000362 Fumarate lyase family CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 2.0E-27 T 14-10-2018 IPR000362 Fumarate lyase family CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 SUPERFAMILY SSF48557 1 456 7.36E-144 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 Pfam PF10415 Fumarase C C-terminus 410 462 3.7E-17 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 PRINTS PR00145 Argininosuccinate lyase family signature 319 335 5.6E-6 T 14-10-2018 CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 PRINTS PR00145 Argininosuccinate lyase family signature 136 158 5.6E-6 T 14-10-2018 CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 PRINTS PR00145 Argininosuccinate lyase family signature 177 197 5.6E-6 T 14-10-2018 CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 5 472 1.5E-266 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 Pfam PF00206 Lyase 12 344 1.0E-103 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 Gene3D G3DSA:1.10.275.10 5 141 1.8E-57 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 Gene3D G3DSA:1.10.40.30 410 459 6.4E-29 T 14-10-2018 CF65_01277 a31c10baf9b5aaf1ac6dd020fd94f930 472 Gene3D G3DSA:1.20.200.10 142 409 5.8E-114 T 14-10-2018 CF65_01700 e9caa02fe84d71cfe15865561e9046ff 286 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 2 284 3.2E-149 T 14-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 CF65_01700 e9caa02fe84d71cfe15865561e9046ff 286 Gene3D G3DSA:3.20.20.150 1 284 8.1E-77 T 14-10-2018 CF65_01700 e9caa02fe84d71cfe15865561e9046ff 286 Pfam PF01261 Xylose isomerase-like TIM barrel 23 234 1.7E-37 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CF65_01700 e9caa02fe84d71cfe15865561e9046ff 286 SUPERFAMILY SSF51658 4 279 4.32E-57 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily CF65_00625 f57d271c178bbffbae1f64f9e2058a77 67 Pfam PF05433 Glycine zipper 2TM domain 30 66 3.9E-7 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 Gene3D G3DSA:3.40.50.720 233 366 4.8E-33 T 14-10-2018 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 Pfam PF02080 TrkA-C domain 156 225 5.0E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 Pfam PF02080 TrkA-C domain 391 451 3.9E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 3.4E-29 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 3.4E-29 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 3.4E-29 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.4E-29 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.4E-29 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 Gene3D G3DSA:3.30.70.1450 367 458 5.6E-26 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 SUPERFAMILY SSF116726 148 226 3.27E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 Gene3D G3DSA:3.30.70.1450 140 232 1.1E-20 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 SUPERFAMILY SSF51735 232 376 7.65E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 Gene3D G3DSA:3.40.50.720 2 139 3.4E-48 T 14-10-2018 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 Pfam PF02254 TrkA-N domain 3 125 2.4E-26 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 Pfam PF02254 TrkA-N domain 235 350 6.0E-22 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 SUPERFAMILY SSF116726 363 440 3.27E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CF65_00407 9a6cfb3453aba4450c0aa5c9215aa040 458 SUPERFAMILY SSF51735 1 151 5.22E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_00741 a994f152dd4f792dc28fc805e28fa160 446 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 445 9.0E-151 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CF65_00741 a994f152dd4f792dc28fc805e28fa160 446 PIRSF PIRSF002457 1 446 1.3E-120 T 14-10-2018 IPR030676 Citrate carrier CitT-related CF65_00741 a994f152dd4f792dc28fc805e28fa160 446 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 445 5.0E-164 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CF65_00276 399af10d9081ab3d1cd589810d8a1f09 213 Gene3D G3DSA:3.40.50.300 1 211 1.3E-52 T 14-10-2018 CF65_00276 399af10d9081ab3d1cd589810d8a1f09 213 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 175 3.0E-49 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CF65_00276 399af10d9081ab3d1cd589810d8a1f09 213 SUPERFAMILY SSF52540 1 197 3.07E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00276 399af10d9081ab3d1cd589810d8a1f09 213 PIRSF PIRSF006755 1 212 1.0E-57 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CF65_00276 399af10d9081ab3d1cd589810d8a1f09 213 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 203 23.364 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CF65_00276 399af10d9081ab3d1cd589810d8a1f09 213 Pfam PF13500 AAA domain 4 180 1.6E-23 T 14-10-2018 CF65_02892 4fb712da0a7b25bd69552f48a94c6e28 232 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 1 152 9.4E-24 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain CF65_02892 4fb712da0a7b25bd69552f48a94c6e28 232 Gene3D G3DSA:3.40.190.10 202 213 1.5E-68 T 14-10-2018 CF65_02892 4fb712da0a7b25bd69552f48a94c6e28 232 Gene3D G3DSA:3.10.105.10 1 201 1.5E-68 T 14-10-2018 CF65_02892 4fb712da0a7b25bd69552f48a94c6e28 232 SUPERFAMILY SSF53850 1 230 1.74E-48 T 14-10-2018 CF65_02142 7b2d5c972fde8c2deb545c30580e5a3c 472 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 468 2.5E-80 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CF65_02142 7b2d5c972fde8c2deb545c30580e5a3c 472 Gene3D G3DSA:2.20.200.10 101 357 6.9E-102 T 14-10-2018 CF65_02142 7b2d5c972fde8c2deb545c30580e5a3c 472 Gene3D G3DSA:1.20.1600.10 54 469 6.9E-102 T 14-10-2018 CF65_02142 7b2d5c972fde8c2deb545c30580e5a3c 472 SUPERFAMILY SSF56954 4 470 4.19E-84 T 14-10-2018 CF65_02142 7b2d5c972fde8c2deb545c30580e5a3c 472 Pfam PF02321 Outer membrane efflux protein 65 255 6.4E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CF65_02142 7b2d5c972fde8c2deb545c30580e5a3c 472 Pfam PF02321 Outer membrane efflux protein 286 466 6.4E-23 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CF65_01625 2475552296a836d33b8a586c03598606 157 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.3E-58 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CF65_01625 2475552296a836d33b8a586c03598606 157 Gene3D G3DSA:3.40.50.960 1 156 1.1E-63 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CF65_01625 2475552296a836d33b8a586c03598606 157 SUPERFAMILY SSF52121 3 154 1.44E-59 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CF65_01625 2475552296a836d33b8a586c03598606 157 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.5E-56 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CF65_01625 2475552296a836d33b8a586c03598606 157 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 32.229 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CF65_00998 cdb25a73a35bb9cc90a9a95165483bfa 137 Gene3D G3DSA:3.30.1450.10 33 119 1.2E-25 T 14-10-2018 IPR037873 BamE-like CF65_00998 cdb25a73a35bb9cc90a9a95165483bfa 137 Pfam PF04355 SmpA / OmlA family 34 103 9.9E-25 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CF65_00998 cdb25a73a35bb9cc90a9a95165483bfa 137 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 3 111 30.911 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE CF65_01311 016fa4d08fc2a5a2d9168494cfcfab8a 199 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 199 36.968 T 14-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 CF65_01311 016fa4d08fc2a5a2d9168494cfcfab8a 199 Gene3D G3DSA:1.10.357.10 10 198 1.4E-57 T 14-10-2018 CF65_01311 016fa4d08fc2a5a2d9168494cfcfab8a 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 63 2.0E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CF65_01311 016fa4d08fc2a5a2d9168494cfcfab8a 199 SUPERFAMILY SSF46689 7 77 2.52E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_01311 016fa4d08fc2a5a2d9168494cfcfab8a 199 SUPERFAMILY SSF48498 86 191 4.15E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CF65_02566 de9a178c5033c17688ce89026a2a9ae7 364 Pfam PF03611 PTS system sugar-specific permease component 3 319 3.9E-114 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CF65_00278 0cf25c2c3fcf6e5ef0483aff400766fd 216 Pfam PF04301 Protein of unknown function (DUF452) 11 213 7.1E-85 T 14-10-2018 IPR007398 Protein of unknown function DUF452 CF65_00278 0cf25c2c3fcf6e5ef0483aff400766fd 216 SUPERFAMILY SSF53474 13 206 1.6E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_01537 719e6249aa2381fce48bc12b870d455c 304 Pfam PF13580 SIS domain 44 173 4.7E-10 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CF65_01537 719e6249aa2381fce48bc12b870d455c 304 Gene3D G3DSA:1.10.8.1080 226 303 4.6E-30 T 14-10-2018 CF65_01537 719e6249aa2381fce48bc12b870d455c 304 SUPERFAMILY SSF53697 13 256 7.34E-75 T 14-10-2018 CF65_01537 719e6249aa2381fce48bc12b870d455c 304 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 CF65_01537 719e6249aa2381fce48bc12b870d455c 304 Gene3D G3DSA:3.40.50.10490 8 225 1.3E-80 T 14-10-2018 CF65_01537 719e6249aa2381fce48bc12b870d455c 304 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 302 4.1E-134 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 CF65_01537 719e6249aa2381fce48bc12b870d455c 304 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 42.595 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 CF65_02668 b9041e8c71070a8cebf3dd3baa8fbd24 428 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 427 7.1E-106 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CF65_02668 b9041e8c71070a8cebf3dd3baa8fbd24 428 Pfam PF02447 GntP family permease 1 426 1.2E-117 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CF65_02668 b9041e8c71070a8cebf3dd3baa8fbd24 428 PIRSF PIRSF002746 1 428 6.0E-141 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CF65_01787 ad22c8282ac5670b0433e73f18a7fac2 198 Pfam PF13023 HD domain 14 159 4.2E-15 T 14-10-2018 IPR006674 HD domain CF65_01787 ad22c8282ac5670b0433e73f18a7fac2 198 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 6 198 41.908 T 14-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 CF65_01787 ad22c8282ac5670b0433e73f18a7fac2 198 SMART SM00471 29 154 2.2E-6 T 14-10-2018 IPR003607 HD/PDEase domain CF65_01787 ad22c8282ac5670b0433e73f18a7fac2 198 Gene3D G3DSA:1.10.3210.10 2 198 8.4E-76 T 14-10-2018 CF65_01787 ad22c8282ac5670b0433e73f18a7fac2 198 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 83 190 1.0E-36 T 14-10-2018 CF65_01787 ad22c8282ac5670b0433e73f18a7fac2 198 SUPERFAMILY SSF109604 6 188 1.04E-40 T 14-10-2018 CF65_01874 f73b321a7154c43a5fc68ba70f2f8181 112 SUPERFAMILY SSF160113 56 109 1.03E-15 T 14-10-2018 IPR036913 YegP-like superfamily CF65_01874 f73b321a7154c43a5fc68ba70f2f8181 112 Gene3D G3DSA:2.30.29.80 2 112 3.4E-42 T 14-10-2018 CF65_01874 f73b321a7154c43a5fc68ba70f2f8181 112 SUPERFAMILY SSF160113 4 58 2.62E-17 T 14-10-2018 IPR036913 YegP-like superfamily CF65_01874 f73b321a7154c43a5fc68ba70f2f8181 112 Pfam PF07411 Domain of unknown function (DUF1508) 11 57 2.7E-21 T 14-10-2018 IPR010879 Domain of unknown function DUF1508 CF65_01874 f73b321a7154c43a5fc68ba70f2f8181 112 Pfam PF07411 Domain of unknown function (DUF1508) 63 109 7.7E-19 T 14-10-2018 IPR010879 Domain of unknown function DUF1508 CF65_00521 57d50ca403ba608c2469a68f3a7be398 167 SUPERFAMILY SSF56784 4 160 1.25E-28 T 14-10-2018 IPR036412 HAD-like superfamily CF65_00521 57d50ca403ba608c2469a68f3a7be398 167 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 155 1.1E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_00521 57d50ca403ba608c2469a68f3a7be398 167 Pfam PF13419 Haloacid dehalogenase-like hydrolase 45 156 8.5E-17 T 14-10-2018 CF65_00521 57d50ca403ba608c2469a68f3a7be398 167 Gene3D G3DSA:1.10.150.240 4 56 2.8E-29 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CF65_00521 57d50ca403ba608c2469a68f3a7be398 167 Gene3D G3DSA:3.40.50.1000 57 157 2.8E-29 T 14-10-2018 IPR023214 HAD superfamily CF65_02506 504dcc2b96c5f5b5da47432929b44f07 255 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 2.3E-47 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CF65_02726 c8b87f52e51f8bcafe31f81fba246b90 555 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 16 285 2.6E-105 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CF65_02726 c8b87f52e51f8bcafe31f81fba246b90 555 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 362 485 1.4E-37 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CF65_02726 c8b87f52e51f8bcafe31f81fba246b90 555 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 16 304 1.6E-100 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CF65_01270 509a1aa18d8a00ac640bb68f6ea3c80b 167 Gene3D G3DSA:3.40.50.1000 48 147 3.2E-34 T 14-10-2018 IPR023214 HAD superfamily CF65_01270 509a1aa18d8a00ac640bb68f6ea3c80b 167 SUPERFAMILY SSF56784 6 159 7.31E-32 T 14-10-2018 IPR036412 HAD-like superfamily CF65_01270 509a1aa18d8a00ac640bb68f6ea3c80b 167 Gene3D G3DSA:1.10.150.240 5 47 3.2E-34 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CF65_01270 509a1aa18d8a00ac640bb68f6ea3c80b 167 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 147 1.2E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_01270 509a1aa18d8a00ac640bb68f6ea3c80b 167 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 147 7.4E-15 T 14-10-2018 CF65_01270 509a1aa18d8a00ac640bb68f6ea3c80b 167 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 151 5.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_01270 509a1aa18d8a00ac640bb68f6ea3c80b 167 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 93 109 5.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_01270 509a1aa18d8a00ac640bb68f6ea3c80b 167 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 131 5.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_01270 509a1aa18d8a00ac640bb68f6ea3c80b 167 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 62 75 5.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_01866 65ca589b9553d50e00254a83b629ec72 518 SUPERFAMILY SSF161098 24 242 4.84E-34 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01866 65ca589b9553d50e00254a83b629ec72 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 53 246 5.8E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_01866 65ca589b9553d50e00254a83b629ec72 518 SUPERFAMILY SSF161098 268 507 1.78E-26 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01866 65ca589b9553d50e00254a83b629ec72 518 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 3 507 1.8E-238 T 14-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 CF65_01866 65ca589b9553d50e00254a83b629ec72 518 Gene3D G3DSA:1.10.3720.10 266 514 3.4E-25 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01866 65ca589b9553d50e00254a83b629ec72 518 Gene3D G3DSA:1.10.3720.10 1 252 6.1E-34 T 14-10-2018 IPR035906 MetI-like superfamily CF65_02834 4dbee38cdc9d700a3d46ee8dbfe5ba93 140 Gene3D G3DSA:3.30.420.270 58 131 6.6E-26 T 14-10-2018 CF65_02834 4dbee38cdc9d700a3d46ee8dbfe5ba93 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 138 3.2E-22 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CF65_02834 4dbee38cdc9d700a3d46ee8dbfe5ba93 140 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 4 138 27.596 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 CF65_02544 c89be92c26219db50908e7ce2330ddbe 183 Gene3D G3DSA:3.40.50.10810 37 182 1.5E-45 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily CF65_02544 c89be92c26219db50908e7ce2330ddbe 183 SUPERFAMILY SSF52540 25 176 3.86E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02544 c89be92c26219db50908e7ce2330ddbe 183 Pfam PF00176 SNF2 family N-terminal domain 9 171 2.3E-19 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CF65_02544 c89be92c26219db50908e7ce2330ddbe 183 SMART SM00487 37 183 1.3E-4 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CF65_02045 40c0780995bea0c4305ebe51f741af00 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 85 4.8E-10 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CF65_02045 40c0780995bea0c4305ebe51f741af00 94 Gene3D G3DSA:3.40.50.2300 2 94 1.6E-30 T 14-10-2018 CF65_02045 40c0780995bea0c4305ebe51f741af00 94 SUPERFAMILY SSF52794 3 92 2.49E-19 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CF65_01459 4f9a83b4aeab167000a9463d74d62062 470 Pfam PF03553 Na+/H+ antiporter family 163 461 1.7E-63 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CF65_01459 4f9a83b4aeab167000a9463d74d62062 470 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 9 468 2.8E-198 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 CF65_00877 30e6996fe272e56f8de1f584485005ca 253 Gene3D G3DSA:1.25.40.10 14 240 3.1E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00877 30e6996fe272e56f8de1f584485005ca 253 SUPERFAMILY SSF48452 61 190 3.49E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_02646 7773953ce1ee7b46b5c6314663b2c724 299 SUPERFAMILY SSF53448 10 296 2.6E-95 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02646 7773953ce1ee7b46b5c6314663b2c724 299 Gene3D G3DSA:3.90.550.10 8 299 3.2E-87 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02646 7773953ce1ee7b46b5c6314663b2c724 299 Pfam PF00483 Nucleotidyl transferase 11 247 1.3E-72 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CF65_02646 7773953ce1ee7b46b5c6314663b2c724 299 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 11 295 3.4E-157 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CF65_00109 62d4c7231b23c7b2c2bc232c73a78a29 164 Gene3D G3DSA:1.20.120.1630 10 164 2.1E-24 T 14-10-2018 CF65_00109 62d4c7231b23c7b2c2bc232c73a78a29 164 Pfam PF04191 Phospholipid methyltransferase 56 152 7.2E-12 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 CF65_00109 62d4c7231b23c7b2c2bc232c73a78a29 164 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 122 164 1.0E-6 T 14-10-2018 CF65_01181 844e73894252eeef7e7976345a0eaa84 147 PIRSF PIRSF020565 2 147 8.0E-41 T 14-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted CF65_01181 844e73894252eeef7e7976345a0eaa84 147 SUPERFAMILY SSF54637 8 145 5.22E-19 T 14-10-2018 IPR029069 HotDog domain superfamily CF65_01181 844e73894252eeef7e7976345a0eaa84 147 Gene3D G3DSA:3.10.129.10 3 144 3.7E-15 T 14-10-2018 CF65_01827 8c784256ae6ef2db2a512d713330056f 299 Gene3D G3DSA:3.40.50.1980 32 287 3.7E-79 T 14-10-2018 CF65_01827 8c784256ae6ef2db2a512d713330056f 299 Gene3D G3DSA:3.40.50.12260 169 272 3.7E-79 T 14-10-2018 CF65_01827 8c784256ae6ef2db2a512d713330056f 299 SUPERFAMILY SSF53807 20 281 2.24E-60 T 14-10-2018 CF65_01827 8c784256ae6ef2db2a512d713330056f 299 Pfam PF01497 Periplasmic binding protein 41 272 5.3E-33 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain CF65_00175 264ebe79c6653f81d5a70ffca13df360 196 SUPERFAMILY SSF140931 5 176 3.79E-40 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_00175 264ebe79c6653f81d5a70ffca13df360 196 Pfam PF02661 Fic/DOC family 29 115 2.5E-12 T 14-10-2018 IPR003812 Fido domain CF65_00175 264ebe79c6653f81d5a70ffca13df360 196 Gene3D G3DSA:1.10.3290.10 1 181 7.3E-72 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_02113 49d7275f91974d3b3769dd732ed83bf8 284 Pfam PF00892 EamA-like transporter family 149 283 3.7E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_02113 49d7275f91974d3b3769dd732ed83bf8 284 SUPERFAMILY SSF103481 66 140 1.29E-5 T 14-10-2018 CF65_02113 49d7275f91974d3b3769dd732ed83bf8 284 SUPERFAMILY SSF103481 186 282 3.27E-5 T 14-10-2018 CF65_01908 f9fa0d67ae07195c02cfa02f3fd7ce98 79 ProDom PD057771 CRO REGULATORY TRANSCRIPTION CP-933R REPRESSOR DNA-BINDING REGULATION BACTERIOPHAGE PROTEIN REGULATOR 2 64 1.0E-10 T 14-10-2018 IPR020114 Cro repressor, HK022-type CF65_01908 f9fa0d67ae07195c02cfa02f3fd7ce98 79 Gene3D G3DSA:1.10.260.40 1 73 5.4E-5 T 14-10-2018 CF65_02531 3302fc747870141a5fdf38aa32eedaab 293 Pfam PF04393 Protein of unknown function (DUF535) 19 284 2.7E-87 T 14-10-2018 IPR007488 Protein of unknown function DUF535 CF65_00993 574c3d287737b07e468711f918033cf4 144 Gene3D G3DSA:3.50.80.10 1 144 1.1E-57 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CF65_00993 574c3d287737b07e468711f918033cf4 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 33.764 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CF65_00993 574c3d287737b07e468711f918033cf4 144 SUPERFAMILY SSF69500 2 143 8.24E-56 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CF65_00993 574c3d287737b07e468711f918033cf4 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 143 3.9E-70 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CF65_00993 574c3d287737b07e468711f918033cf4 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 2.3E-54 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CF65_02259 79ec0846ad5843f314ee0095fa56fbb0 61 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 12 52 1.0E-5 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CF65_02259 79ec0846ad5843f314ee0095fa56fbb0 61 SUPERFAMILY SSF143011 7 49 1.88E-8 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_02259 79ec0846ad5843f314ee0095fa56fbb0 61 Gene3D G3DSA:3.30.2310.20 2 61 4.7E-14 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_02504 951753f258e9c26ebd904014f7192677 318 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 18 309 9.0E-104 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CF65_02504 951753f258e9c26ebd904014f7192677 318 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 16 317 1.6E-148 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 CF65_02504 951753f258e9c26ebd904014f7192677 318 PIRSF PIRSF026649 16 316 1.7E-90 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CF65_02504 951753f258e9c26ebd904014f7192677 318 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 10 314 51.16 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 CF65_01523 22d265704c0ab1ad5c09e50837d9f3fe 95 SUPERFAMILY SSF75169 1 93 4.42E-17 T 14-10-2018 IPR027396 DsrEFH-like CF65_01523 22d265704c0ab1ad5c09e50837d9f3fe 95 Gene3D G3DSA:3.40.1260.10 1 94 2.2E-14 T 14-10-2018 IPR027396 DsrEFH-like CF65_01523 22d265704c0ab1ad5c09e50837d9f3fe 95 Pfam PF04077 DsrH like protein 10 90 7.9E-17 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CF65_02599 b974994178beb0f2a075aad816bec3cf 185 PIRSF PIRSF004982 1 185 5.4E-44 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CF65_02599 b974994178beb0f2a075aad816bec3cf 185 Pfam PF03843 Outer membrane lipoprotein Slp family 16 166 1.3E-43 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CF65_02599 b974994178beb0f2a075aad816bec3cf 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 3 182 5.2E-54 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CF65_02615 61a3754db113466b4854b62927cef595 194 Gene3D G3DSA:3.15.10.40 22 191 2.6E-49 T 14-10-2018 CF65_02615 61a3754db113466b4854b62927cef595 194 Pfam PF07273 Protein of unknown function (DUF1439) 31 182 3.3E-45 T 14-10-2018 IPR010835 Protein of unknown function DUF1439 CF65_02365 0447a094b1798c5193494dd172c2bc01 295 PIRSF PIRSF005651 1 295 4.2E-98 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 CF65_02365 0447a094b1798c5193494dd172c2bc01 295 SUPERFAMILY SSF117892 56 196 1.28E-26 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily CF65_02365 0447a094b1798c5193494dd172c2bc01 295 Pfam PF01145 SPFH domain / Band 7 family 22 207 3.3E-34 T 14-10-2018 IPR001107 Band 7 domain CF65_02365 0447a094b1798c5193494dd172c2bc01 295 TIGRFAM TIGR01932 hflC: HflC protein 153 291 2.0E-55 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 CF65_02365 0447a094b1798c5193494dd172c2bc01 295 TIGRFAM TIGR01932 hflC: HflC protein 1 158 2.0E-59 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 CF65_02365 0447a094b1798c5193494dd172c2bc01 295 SMART SM00244 18 191 8.6E-50 T 14-10-2018 IPR001107 Band 7 domain CF65_02365 0447a094b1798c5193494dd172c2bc01 295 Gene3D G3DSA:3.30.479.30 53 193 4.6E-20 T 14-10-2018 CF65_02272 d42a203e297a9442e616b76c30890cb8 148 Gene3D G3DSA:1.10.1220.10 98 148 9.1E-12 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CF65_02272 d42a203e297a9442e616b76c30890cb8 148 Gene3D G3DSA:1.20.1270.380 1 89 1.7E-37 T 14-10-2018 IPR038339 MatP, N-terminal domain superfamily CF65_02272 d42a203e297a9442e616b76c30890cb8 148 Pfam PF06303 MatP N-terminal domain 2 85 3.8E-38 T 14-10-2018 IPR035087 MatP, N-terminal CF65_02272 d42a203e297a9442e616b76c30890cb8 148 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 129 4.0E-58 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 CF65_02272 d42a203e297a9442e616b76c30890cb8 148 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 89 147 2.6E-29 T 14-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain CF65_02272 d42a203e297a9442e616b76c30890cb8 148 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.974 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 CF65_00037 2f249c003690041754c35e7f34264d91 219 Pfam PF08722 TnsA endonuclease N terminal 50 128 1.4E-12 T 14-10-2018 IPR014833 TnsA endonuclease, N-terminal CF65_00037 2f249c003690041754c35e7f34264d91 219 Pfam PF08721 TnsA endonuclease C terminal 131 204 4.1E-12 T 14-10-2018 IPR014832 TnsA endonuclease C-terminal CF65_01466 45d1971ec950142f81abf045661b2add 267 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 7.1E-115 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CF65_01466 45d1971ec950142f81abf045661b2add 267 Pfam PF03609 PTS system sorbose-specific iic component 6 237 9.7E-75 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CF65_00541 16b8f3075326f89d66cbf4ab874feebd 375 Pfam PF13776 Domain of unknown function (DUF4172) 5 86 9.6E-29 T 14-10-2018 IPR025230 Domain of unknown function DUF4172 CF65_00541 16b8f3075326f89d66cbf4ab874feebd 375 Pfam PF02661 Fic/DOC family 115 227 1.2E-17 T 14-10-2018 IPR003812 Fido domain CF65_00541 16b8f3075326f89d66cbf4ab874feebd 375 SUPERFAMILY SSF140931 99 298 1.96E-35 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_00541 16b8f3075326f89d66cbf4ab874feebd 375 Gene3D G3DSA:1.10.3290.10 42 295 2.6E-42 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_02040 d98d17c1e238dd4834f77180f3d3788c 73 Gene3D G3DSA:3.30.70.1290 1 70 1.7E-19 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 CF65_02040 d98d17c1e238dd4834f77180f3d3788c 73 Pfam PF01797 Transposase IS200 like 1 66 1.1E-16 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CF65_02040 d98d17c1e238dd4834f77180f3d3788c 73 SUPERFAMILY SSF143422 1 67 4.45E-21 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 CF65_01930 17a38f606e7fbb554ebf03d51526641d 128 SUPERFAMILY SSF89919 2 106 3.53E-34 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily CF65_01930 17a38f606e7fbb554ebf03d51526641d 128 Pfam PF02033 Ribosome-binding factor A 7 111 7.4E-32 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CF65_01930 17a38f606e7fbb554ebf03d51526641d 128 Gene3D G3DSA:3.30.300.20 1 106 1.3E-41 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta CF65_01930 17a38f606e7fbb554ebf03d51526641d 128 ProSitePatterns PS01319 Ribosome-binding factor A signature. 78 99 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CF65_01930 17a38f606e7fbb554ebf03d51526641d 128 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 112 26.757 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CF65_01930 17a38f606e7fbb554ebf03d51526641d 128 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 117 5.1E-44 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CF65_01930 17a38f606e7fbb554ebf03d51526641d 128 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 99 1.0E-38 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CF65_00735 b0b841ba2bb8166e8d91179c08df34b5 291 Gene3D G3DSA:3.20.20.60 1 288 4.5E-92 T 14-10-2018 CF65_00735 b0b841ba2bb8166e8d91179c08df34b5 291 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 2 286 3.5E-143 T 14-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 CF65_00735 b0b841ba2bb8166e8d91179c08df34b5 291 SUPERFAMILY SSF51621 2 234 8.37E-61 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CF65_00735 b0b841ba2bb8166e8d91179c08df34b5 291 PIRSF PIRSF015582 1 291 7.1E-78 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like CF65_00735 b0b841ba2bb8166e8d91179c08df34b5 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 5 224 1.4E-82 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CF65_02858 35257c0b4db4b9939a3696088bafcbb1 241 Pfam PF13649 Methyltransferase domain 59 157 1.8E-12 T 14-10-2018 CF65_02858 35257c0b4db4b9939a3696088bafcbb1 241 PIRSF PIRSF006325 1 241 1.7E-123 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CF65_02858 35257c0b4db4b9939a3696088bafcbb1 241 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 3 241 2.9E-132 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CF65_02858 35257c0b4db4b9939a3696088bafcbb1 241 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 2 241 42.442 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CF65_02858 35257c0b4db4b9939a3696088bafcbb1 241 SUPERFAMILY SSF53335 19 241 8.52E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_02858 35257c0b4db4b9939a3696088bafcbb1 241 Gene3D G3DSA:3.40.50.150 17 241 1.2E-60 T 14-10-2018 CF65_01633 5d19ebb21604dafb9033ea548b4df0f1 82 SUPERFAMILY SSF54292 2 82 9.96E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CF65_01633 5d19ebb21604dafb9033ea548b4df0f1 82 Gene3D G3DSA:3.10.20.30 1 82 1.4E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily CF65_01633 5d19ebb21604dafb9033ea548b4df0f1 82 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 74 7.6E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CF65_01633 5d19ebb21604dafb9033ea548b4df0f1 82 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CF65_01098 5154d83e80891b3d7932b00385fab6c7 275 PIRSF PIRSF000903 1 275 1.7E-123 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CF65_01098 5154d83e80891b3d7932b00385fab6c7 275 Pfam PF00149 Calcineurin-like phosphoesterase 4 150 2.7E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CF65_01098 5154d83e80891b3d7932b00385fab6c7 275 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 49.346 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CF65_01098 5154d83e80891b3d7932b00385fab6c7 275 SUPERFAMILY SSF56300 1 259 7.6E-51 T 14-10-2018 CF65_01098 5154d83e80891b3d7932b00385fab6c7 275 Gene3D G3DSA:3.60.21.10 1 274 9.4E-78 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like CF65_01098 5154d83e80891b3d7932b00385fab6c7 275 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 273 1.2E-166 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CF65_00992 fca8a515f37b7aa8254875b672816701 276 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 7 262 6.8E-98 T 14-10-2018 IPR017039 Virulence factor BrkB CF65_00992 fca8a515f37b7aa8254875b672816701 276 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 4 272 23.542 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial CF65_00992 fca8a515f37b7aa8254875b672816701 276 Pfam PF03631 Virulence factor BrkB 17 262 2.3E-58 T 14-10-2018 IPR017039 Virulence factor BrkB CF65_00992 fca8a515f37b7aa8254875b672816701 276 PIRSF PIRSF035875 3 276 9.0E-63 T 14-10-2018 IPR017039 Virulence factor BrkB CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 Pfam PF08238 Sel1 repeat 359 394 7.7E-4 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 Pfam PF08238 Sel1 repeat 328 351 6.8 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 Pfam PF08238 Sel1 repeat 159 172 120.0 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 Pfam PF08238 Sel1 repeat 99 141 0.013 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 Pfam PF08238 Sel1 repeat 27 61 4.5E-5 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 Pfam PF08238 Sel1 repeat 308 325 4.0 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 Pfam PF08238 Sel1 repeat 228 239 54.0 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 Pfam PF08238 Sel1 repeat 63 97 8.2E-5 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 SMART SM00671 26 61 1.8E-6 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 SMART SM00671 359 394 4.6E-5 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 SMART SM00671 297 325 18.0 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 SMART SM00671 98 141 0.013 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 SMART SM00671 62 97 3.5E-9 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 SMART SM00671 326 356 20.0 T 14-10-2018 IPR006597 Sel1-like repeat CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 Gene3D G3DSA:1.25.40.10 119 407 6.7E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 SUPERFAMILY SSF81901 228 397 2.88E-15 T 14-10-2018 CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 Gene3D G3DSA:1.25.40.10 2 118 4.6E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00022 bed3f4c4c55e43258586ab4d69aba5a5 410 SUPERFAMILY SSF81901 13 197 2.27E-25 T 14-10-2018 CF65_00388 125b4cc4e84309a30ebb9ec64a246439 252 Gene3D G3DSA:3.40.50.1580 2 251 2.5E-77 T 14-10-2018 CF65_00388 125b4cc4e84309a30ebb9ec64a246439 252 SUPERFAMILY SSF53167 6 248 4.45E-67 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CF65_00388 125b4cc4e84309a30ebb9ec64a246439 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CF65_00388 125b4cc4e84309a30ebb9ec64a246439 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 4 252 1.9E-105 T 14-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 CF65_00388 125b4cc4e84309a30ebb9ec64a246439 252 Pfam PF01048 Phosphorylase superfamily 18 250 1.1E-37 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CF65_02538 386fb5287bd9d420d460d0d77cb499b6 242 Pfam PF03591 AzlC protein 24 164 1.9E-31 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease CF65_01811 185ea1e5e1f2d322000f54911deee458 206 PIRSF PIRSF006091 1 205 1.3E-65 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CF65_01811 185ea1e5e1f2d322000f54911deee458 206 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 12 192 8.4E-62 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CF65_01811 185ea1e5e1f2d322000f54911deee458 206 SMART SM00900 102 194 3.4E-33 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CF65_01811 185ea1e5e1f2d322000f54911deee458 206 Pfam PF04205 FMN-binding domain 102 191 6.3E-19 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CF65_01811 185ea1e5e1f2d322000f54911deee458 206 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 4 196 23.758 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CF65_00116 dcb1ef6797902a4e5f30e625d7003ca9 533 Pfam PF00884 Sulfatase 227 494 4.0E-36 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CF65_00116 dcb1ef6797902a4e5f30e625d7003ca9 533 SUPERFAMILY SSF53649 228 498 8.04E-22 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CF65_00116 dcb1ef6797902a4e5f30e625d7003ca9 533 Gene3D G3DSA:3.40.720.10 220 509 2.6E-51 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CF65_00208 7c6e58b2ef8ba2ed5e1c5b5d2cabb1b2 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 291 1.1E-46 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CF65_01854 ee427bdebddd413024eff072a3d2356b 116 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 105 2.9E-24 T 14-10-2018 IPR009241 Toxin HigB-like CF65_00796 f8ef39fe58d127d6aa28bfa8705e4b45 329 Pfam PF01032 FecCD transport family 15 325 6.9E-85 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CF65_00796 f8ef39fe58d127d6aa28bfa8705e4b45 329 SUPERFAMILY SSF81345 5 324 1.28E-71 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_00796 f8ef39fe58d127d6aa28bfa8705e4b45 329 Gene3D G3DSA:1.10.3470.10 3 329 3.3E-84 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_00908 3021438ca8df7ee2b8b7d22936272890 145 PIRSF PIRSF004923 1 145 1.1E-40 T 14-10-2018 IPR026268 Protein RseC CF65_00908 3021438ca8df7ee2b8b7d22936272890 145 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 143 1.3E-36 T 14-10-2018 CF65_00431 fc0ed1bdaefa2ac1aaaaa589ad9d0078 275 SUPERFAMILY SSF48150 124 221 5.23E-12 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CF65_00431 fc0ed1bdaefa2ac1aaaaa589ad9d0078 275 SMART SM00478 92 240 0.0037 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CF65_00431 fc0ed1bdaefa2ac1aaaaa589ad9d0078 275 Gene3D G3DSA:1.10.1670.10 182 239 8.9E-21 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CF65_00431 fc0ed1bdaefa2ac1aaaaa589ad9d0078 275 Gene3D G3DSA:1.10.340.30 66 180 8.9E-21 T 14-10-2018 CF65_01304 d2d4d16c7014b6c4abc0f61750f2806a 855 SUPERFAMILY SSF53955 43 256 2.33E-78 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily CF65_01304 d2d4d16c7014b6c4abc0f61750f2806a 855 Pfam PF00905 Penicillin binding protein transpeptidase domain 416 588 1.4E-18 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CF65_01304 d2d4d16c7014b6c4abc0f61750f2806a 855 Gene3D G3DSA:1.10.3810.10 48 244 9.9E-79 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_01304 d2d4d16c7014b6c4abc0f61750f2806a 855 Pfam PF17092 Penicillin-binding protein OB-like domain 321 412 1.1E-12 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_01304 d2d4d16c7014b6c4abc0f61750f2806a 855 SUPERFAMILY SSF56601 211 829 5.63E-107 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CF65_01304 d2d4d16c7014b6c4abc0f61750f2806a 855 Gene3D G3DSA:2.40.50.140 331 409 2.7E-6 T 14-10-2018 CF65_01304 d2d4d16c7014b6c4abc0f61750f2806a 855 Pfam PF00912 Transglycosylase 55 229 1.3E-62 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CF65_02618 db59719585d9caf2a7b6d89528d0543c 253 SUPERFAMILY SSF48317 8 251 2.88E-26 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CF65_02618 db59719585d9caf2a7b6d89528d0543c 253 Gene3D G3DSA:1.20.144.10 10 253 2.9E-59 T 14-10-2018 CF65_02618 db59719585d9caf2a7b6d89528d0543c 253 Pfam PF01569 PAP2 superfamily 87 246 8.0E-29 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CF65_02618 db59719585d9caf2a7b6d89528d0543c 253 SMART SM00014 85 240 4.5E-27 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CF65_01423 7ee58cd930dd9c5fde13d3b9e1d5dcc9 311 Gene3D G3DSA:3.30.70.3040 54 167 1.6E-6 T 14-10-2018 CF65_01423 7ee58cd930dd9c5fde13d3b9e1d5dcc9 311 PIRSF PIRSF003097 9 306 6.7E-76 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 CF65_01423 7ee58cd930dd9c5fde13d3b9e1d5dcc9 311 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 12 310 2.8E-137 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 CF65_01732 9e89f04782aafba0b350afde09f8ef63 386 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 17 341 1.0E-129 T 14-10-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 CF65_01732 9e89f04782aafba0b350afde09f8ef63 386 SUPERFAMILY SSF111369 56 263 3.4E-11 T 14-10-2018 CF65_01732 9e89f04782aafba0b350afde09f8ef63 386 Pfam PF00529 HlyD membrane-fusion protein of T1SS 34 338 1.1E-15 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CF65_01732 9e89f04782aafba0b350afde09f8ef63 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 288 4.9E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CF65_01732 9e89f04782aafba0b350afde09f8ef63 386 Gene3D G3DSA:2.40.30.170 229 347 3.6E-33 T 14-10-2018 CF65_01732 9e89f04782aafba0b350afde09f8ef63 386 Gene3D G3DSA:1.10.287.470 91 178 2.9E-12 T 14-10-2018 CF65_01732 9e89f04782aafba0b350afde09f8ef63 386 Gene3D G3DSA:2.40.50.100 56 179 2.9E-12 T 14-10-2018 CF65_00004 f7a2b55389f3b9961a0cc03edccff290 251 Pfam PF13649 Methyltransferase domain 42 139 7.4E-19 T 14-10-2018 CF65_00004 f7a2b55389f3b9961a0cc03edccff290 251 SUPERFAMILY SSF53335 14 244 6.91E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00004 f7a2b55389f3b9961a0cc03edccff290 251 Gene3D G3DSA:3.40.50.150 18 251 3.6E-41 T 14-10-2018 CF65_00953 61b1629e56d0dd67835e0ab225c981ce 461 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 72 414 9.8E-126 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CF65_01838 25ef5cb9af82d970cb00dc905c9d55e4 156 Pfam PF06252 Protein of unknown function (DUF1018) 24 152 4.3E-28 T 14-10-2018 IPR009363 Bacteriophage Mu, Gp16 CF65_01513 fc539c1abb123e72665cc98dd944b326 299 SUPERFAMILY SSF46785 1 86 1.32E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_01513 fc539c1abb123e72665cc98dd944b326 299 Gene3D G3DSA:1.10.10.10 1 85 1.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01513 fc539c1abb123e72665cc98dd944b326 299 Gene3D G3DSA:3.40.190.10 164 267 3.6E-68 T 14-10-2018 CF65_01513 fc539c1abb123e72665cc98dd944b326 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.8E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01513 fc539c1abb123e72665cc98dd944b326 299 Gene3D G3DSA:3.40.190.10 91 281 3.6E-68 T 14-10-2018 CF65_01513 fc539c1abb123e72665cc98dd944b326 299 Pfam PF03466 LysR substrate binding domain 90 291 1.4E-47 T 14-10-2018 IPR005119 LysR, substrate-binding CF65_01513 fc539c1abb123e72665cc98dd944b326 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01513 fc539c1abb123e72665cc98dd944b326 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01513 fc539c1abb123e72665cc98dd944b326 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CF65_01513 fc539c1abb123e72665cc98dd944b326 299 SUPERFAMILY SSF53850 88 296 3.88E-43 T 14-10-2018 CF65_00673 748607edd5979051511a986e0d5e6048 84 Gene3D G3DSA:2.10.260.10 4 81 1.0E-6 T 14-10-2018 CF65_02011 01d624e3dc748d206ae3489c9b3e591a 213 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 11 209 3.3E-63 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CF65_00348 e5349f4956ead70799a1c385c3f22456 229 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00348 e5349f4956ead70799a1c385c3f22456 229 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.7E-53 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CF65_00348 e5349f4956ead70799a1c385c3f22456 229 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.5E-107 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CF65_00348 e5349f4956ead70799a1c385c3f22456 229 Gene3D G3DSA:3.40.50.790 68 159 4.3E-82 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CF65_00348 e5349f4956ead70799a1c385c3f22456 229 Gene3D G3DSA:3.30.190.20 21 225 4.3E-82 T 14-10-2018 CF65_00348 e5349f4956ead70799a1c385c3f22456 229 SUPERFAMILY SSF56808 6 226 1.23E-83 T 14-10-2018 IPR023674 Ribosomal protein L1-like CF65_00348 e5349f4956ead70799a1c385c3f22456 229 PIRSF PIRSF002155 1 227 2.3E-79 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_00348 e5349f4956ead70799a1c385c3f22456 229 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.42 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CF65_02215 dbd9fa87566a96f9c00eaa2b078e4e9f 100 SUPERFAMILY SSF54909 1 95 1.07E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel CF65_02215 dbd9fa87566a96f9c00eaa2b078e4e9f 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 3.9E-17 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CF65_02215 dbd9fa87566a96f9c00eaa2b078e4e9f 100 Gene3D G3DSA:3.30.70.100 1 96 5.3E-31 T 14-10-2018 CF65_00582 cb3d4d42224d6f07dcd1d2bd2c5d2138 104 Pfam PF17364 Family of unknown function (DUF5389) 1 104 1.3E-52 T 14-10-2018 IPR035333 Protein of unknown function DUF5389 CF65_00582 cb3d4d42224d6f07dcd1d2bd2c5d2138 104 ProDom PD394376 MEMBRANE PM1437 TRANSMEMBRANE 1 98 6.0E-19 T 14-10-2018 IPR035333 Protein of unknown function DUF5389 CF65_00058 e2aa4bfe9f9dc3f22bdc63a8a138f8ff 245 Pfam PF01578 Cytochrome C assembly protein 4 184 3.2E-35 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CF65_00058 e2aa4bfe9f9dc3f22bdc63a8a138f8ff 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 227 4.1E-86 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00058 e2aa4bfe9f9dc3f22bdc63a8a138f8ff 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 6.5E-62 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00058 e2aa4bfe9f9dc3f22bdc63a8a138f8ff 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 6.5E-62 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00058 e2aa4bfe9f9dc3f22bdc63a8a138f8ff 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 6.5E-62 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00058 e2aa4bfe9f9dc3f22bdc63a8a138f8ff 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 6.5E-62 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00058 e2aa4bfe9f9dc3f22bdc63a8a138f8ff 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 6.5E-62 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00058 e2aa4bfe9f9dc3f22bdc63a8a138f8ff 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 6.5E-62 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 SUPERFAMILY SSF49493 144 238 7.19E-16 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 Pfam PF01556 DnaJ C terminal domain 152 305 1.6E-30 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 Gene3D G3DSA:2.60.260.20 230 305 3.4E-18 T 14-10-2018 CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 Pfam PF00226 DnaJ domain 5 66 9.9E-23 T 14-10-2018 IPR001623 DnaJ domain CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 PRINTS PR00625 DnaJ domain signature 41 61 3.6E-20 T 14-10-2018 IPR001623 DnaJ domain CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 PRINTS PR00625 DnaJ domain signature 7 25 3.6E-20 T 14-10-2018 IPR001623 DnaJ domain CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 PRINTS PR00625 DnaJ domain signature 61 80 3.6E-20 T 14-10-2018 IPR001623 DnaJ domain CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 PRINTS PR00625 DnaJ domain signature 25 40 3.6E-20 T 14-10-2018 IPR001623 DnaJ domain CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 Gene3D G3DSA:1.10.287.110 1 143 4.0E-27 T 14-10-2018 IPR036869 Chaperone J-domain superfamily CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 Gene3D G3DSA:2.60.260.20 145 227 1.8E-20 T 14-10-2018 CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 SUPERFAMILY SSF46565 1 86 2.09E-28 T 14-10-2018 IPR036869 Chaperone J-domain superfamily CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 SUPERFAMILY SSF49493 237 314 4.06E-12 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CF65_00688 6dddcd78270901d5fbf68aa1142fc139 327 SMART SM00271 4 61 6.0E-26 T 14-10-2018 IPR001623 DnaJ domain CF65_02978 365137b1ebbbb8bdc670126f618801b3 472 Gene3D G3DSA:2.60.40.420 31 166 2.1E-29 T 14-10-2018 IPR008972 Cupredoxin CF65_02978 365137b1ebbbb8bdc670126f618801b3 472 SUPERFAMILY SSF49503 175 290 1.74E-24 T 14-10-2018 IPR008972 Cupredoxin CF65_02978 365137b1ebbbb8bdc670126f618801b3 472 SUPERFAMILY SSF49503 364 471 9.96E-8 T 14-10-2018 IPR008972 Cupredoxin CF65_02978 365137b1ebbbb8bdc670126f618801b3 472 SUPERFAMILY SSF49503 27 170 1.16E-22 T 14-10-2018 IPR008972 Cupredoxin CF65_02978 365137b1ebbbb8bdc670126f618801b3 472 Gene3D G3DSA:2.60.40.420 351 472 1.1E-14 T 14-10-2018 IPR008972 Cupredoxin CF65_02978 365137b1ebbbb8bdc670126f618801b3 472 Hamap MF_00915 Cell division protein FtsP [ftsP]. 4 472 60.92 T 14-10-2018 IPR026589 Cell division protein FtsP GO:0043093 CF65_02978 365137b1ebbbb8bdc670126f618801b3 472 Gene3D G3DSA:2.60.40.420 167 343 6.9E-38 T 14-10-2018 IPR008972 Cupredoxin CF65_02978 365137b1ebbbb8bdc670126f618801b3 472 Pfam PF07732 Multicopper oxidase 54 169 6.8E-23 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CF65_01956 7ae21c799db0c9dab4fe649622fe6b54 257 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 253 46.707 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CF65_01956 7ae21c799db0c9dab4fe649622fe6b54 257 SUPERFAMILY SSF53448 4 254 2.48E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01956 7ae21c799db0c9dab4fe649622fe6b54 257 Pfam PF02348 Cytidylyltransferase 6 226 1.1E-68 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CF65_01956 7ae21c799db0c9dab4fe649622fe6b54 257 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 3 246 9.7E-126 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CF65_01956 7ae21c799db0c9dab4fe649622fe6b54 257 Gene3D G3DSA:3.90.550.10 3 256 5.9E-95 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00785 aca65a2735ac740f35d06a28d96e14f6 124 Gene3D G3DSA:3.30.160.390 6 57 7.2E-15 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CF65_02684 f23ebbe6c44abce0b14b93928be0d854 673 Pfam PF00361 Proton-conducting membrane transporter 134 418 3.0E-55 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02684 f23ebbe6c44abce0b14b93928be0d854 673 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 168 192 7.6E-11 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02684 f23ebbe6c44abce0b14b93928be0d854 673 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 388 414 7.6E-11 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02684 f23ebbe6c44abce0b14b93928be0d854 673 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 7.6E-11 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_01162 176515210f15a079997083af411fe840 208 Pfam PF04224 Protein of unknown function, DUF417 9 202 4.5E-75 T 14-10-2018 IPR007339 Inner membrane protein RclC-like CF65_01880 c010268354219261ddf6fe07259e6ed6 407 SUPERFAMILY SSF46785 12 76 2.95E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_01880 c010268354219261ddf6fe07259e6ed6 407 Gene3D G3DSA:1.10.10.10 2 79 2.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01880 c010268354219261ddf6fe07259e6ed6 407 Gene3D G3DSA:3.30.420.40 91 387 2.9E-84 T 14-10-2018 CF65_01880 c010268354219261ddf6fe07259e6ed6 407 ProSitePatterns PS01125 ROK family signature. 220 247 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CF65_01880 c010268354219261ddf6fe07259e6ed6 407 Pfam PF00480 ROK family 87 393 7.4E-67 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CF65_01880 c010268354219261ddf6fe07259e6ed6 407 SUPERFAMILY SSF53067 87 394 1.19E-49 T 14-10-2018 CF65_01880 c010268354219261ddf6fe07259e6ed6 407 Gene3D G3DSA:3.30.420.40 210 379 2.9E-84 T 14-10-2018 CF65_01670 1df927ad9b24ffa92c448ebcb9e50136 100 Gene3D G3DSA:3.30.110.60 3 100 2.4E-37 T 14-10-2018 IPR035920 YhbY-like superfamily CF65_01670 1df927ad9b24ffa92c448ebcb9e50136 100 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 100 1.0E-39 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CF65_01670 1df927ad9b24ffa92c448ebcb9e50136 100 SMART SM01103 5 88 3.1E-44 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CF65_01670 1df927ad9b24ffa92c448ebcb9e50136 100 SUPERFAMILY SSF75471 4 97 1.06E-31 T 14-10-2018 IPR035920 YhbY-like superfamily CF65_01670 1df927ad9b24ffa92c448ebcb9e50136 100 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 5 99 1.6E-37 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 CF65_01670 1df927ad9b24ffa92c448ebcb9e50136 100 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 1.1E-22 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CF65_00380 47d1e0ff1590b172692542503627d8fe 310 SUPERFAMILY SSF53633 1 299 9.82E-78 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CF65_00380 47d1e0ff1590b172692542503627d8fe 310 Gene3D G3DSA:3.40.1160.10 1 302 3.6E-114 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CF65_00380 47d1e0ff1590b172692542503627d8fe 310 PRINTS PR01469 Bacterial carbamate kinase signature 71 89 7.7E-68 T 14-10-2018 CF65_00380 47d1e0ff1590b172692542503627d8fe 310 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 7.7E-68 T 14-10-2018 CF65_00380 47d1e0ff1590b172692542503627d8fe 310 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 7.7E-68 T 14-10-2018 CF65_00380 47d1e0ff1590b172692542503627d8fe 310 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 7.7E-68 T 14-10-2018 CF65_00380 47d1e0ff1590b172692542503627d8fe 310 PRINTS PR01469 Bacterial carbamate kinase signature 41 60 7.7E-68 T 14-10-2018 CF65_00380 47d1e0ff1590b172692542503627d8fe 310 PRINTS PR01469 Bacterial carbamate kinase signature 256 271 7.7E-68 T 14-10-2018 CF65_00380 47d1e0ff1590b172692542503627d8fe 310 PRINTS PR01469 Bacterial carbamate kinase signature 205 220 7.7E-68 T 14-10-2018 CF65_00380 47d1e0ff1590b172692542503627d8fe 310 Pfam PF00696 Amino acid kinase family 1 282 3.1E-25 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CF65_00380 47d1e0ff1590b172692542503627d8fe 310 PIRSF PIRSF000723 1 301 7.2E-112 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CF65_00380 47d1e0ff1590b172692542503627d8fe 310 TIGRFAM TIGR00746 arcC: carbamate kinase 1 300 4.7E-128 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CF65_00817 568f69620af555da09c54c8dcfa16580 207 ProSitePatterns PS00893 Nudix box signature. 95 116 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CF65_00817 568f69620af555da09c54c8dcfa16580 207 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 10 197 2.8E-72 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CF65_00817 568f69620af555da09c54c8dcfa16580 207 Pfam PF00293 NUDIX domain 54 170 8.2E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CF65_00817 568f69620af555da09c54c8dcfa16580 207 Gene3D G3DSA:3.90.79.10 2 207 7.6E-59 T 14-10-2018 CF65_00817 568f69620af555da09c54c8dcfa16580 207 SUPERFAMILY SSF55811 5 203 3.93E-41 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CF65_01395 fb196f1ab7fc216de3c0e83eb51f6446 113 Gene3D G3DSA:1.20.1290.10 2 113 1.4E-29 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CF65_01395 fb196f1ab7fc216de3c0e83eb51f6446 113 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 42 90 9.1E-18 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CF65_01395 fb196f1ab7fc216de3c0e83eb51f6446 113 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 107 1.2E-19 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CF65_01395 fb196f1ab7fc216de3c0e83eb51f6446 113 SUPERFAMILY SSF69118 5 109 6.54E-28 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CF65_02149 dd4c4443e046e44690a1abb3f6886534 215 SUPERFAMILY SSF46955 7 67 6.32E-16 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily CF65_02149 dd4c4443e046e44690a1abb3f6886534 215 Pfam PF02316 Mu DNA-binding domain 81 138 1.3E-11 T 14-10-2018 IPR003314 Mu-type HTH domain GO:0003677 CF65_02149 dd4c4443e046e44690a1abb3f6886534 215 Pfam PF02316 Mu DNA-binding domain 15 65 6.1E-15 T 14-10-2018 IPR003314 Mu-type HTH domain GO:0003677 CF65_02149 dd4c4443e046e44690a1abb3f6886534 215 Gene3D G3DSA:1.10.10.10 73 142 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02149 dd4c4443e046e44690a1abb3f6886534 215 Gene3D G3DSA:1.10.10.10 6 70 1.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02149 dd4c4443e046e44690a1abb3f6886534 215 SUPERFAMILY SSF46955 74 134 5.04E-16 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily CF65_01445 6681bb611948ddd21c3ba89f722d7822 43 SUPERFAMILY SSF46689 2 41 1.79E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_02643 612451d575621cd3b2944657177058d0 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 180 199 8.4E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CF65_02643 612451d575621cd3b2944657177058d0 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 38 59 8.4E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CF65_02643 612451d575621cd3b2944657177058d0 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 143 167 8.4E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CF65_02643 612451d575621cd3b2944657177058d0 263 Pfam PF01061 ABC-2 type transporter 18 223 8.2E-29 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CF65_02493 4a53179c158df2038929ac523ad2b03d 239 SMART SM00671 153 187 5.0E-5 T 14-10-2018 IPR006597 Sel1-like repeat CF65_02493 4a53179c158df2038929ac523ad2b03d 239 SMART SM00671 188 223 9.0E-4 T 14-10-2018 IPR006597 Sel1-like repeat CF65_02493 4a53179c158df2038929ac523ad2b03d 239 SMART SM00671 117 152 8.5E-4 T 14-10-2018 IPR006597 Sel1-like repeat CF65_02493 4a53179c158df2038929ac523ad2b03d 239 SMART SM00671 81 116 9.5E-10 T 14-10-2018 IPR006597 Sel1-like repeat CF65_02493 4a53179c158df2038929ac523ad2b03d 239 Pfam PF08238 Sel1 repeat 82 116 9.0E-9 T 14-10-2018 IPR006597 Sel1-like repeat CF65_02493 4a53179c158df2038929ac523ad2b03d 239 Pfam PF08238 Sel1 repeat 118 149 0.0017 T 14-10-2018 IPR006597 Sel1-like repeat CF65_02493 4a53179c158df2038929ac523ad2b03d 239 Pfam PF08238 Sel1 repeat 153 187 1.6E-5 T 14-10-2018 IPR006597 Sel1-like repeat CF65_02493 4a53179c158df2038929ac523ad2b03d 239 Pfam PF08238 Sel1 repeat 189 213 0.01 T 14-10-2018 IPR006597 Sel1-like repeat CF65_02493 4a53179c158df2038929ac523ad2b03d 239 Gene3D G3DSA:1.25.40.10 45 239 1.5E-45 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_02493 4a53179c158df2038929ac523ad2b03d 239 SUPERFAMILY SSF81901 52 228 4.01E-37 T 14-10-2018 CF65_02880 7c8e3c035287ddad4e47328ca31c0050 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.4E-39 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02880 7c8e3c035287ddad4e47328ca31c0050 103 SUPERFAMILY SSF141091 1 102 1.23E-37 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02880 7c8e3c035287ddad4e47328ca31c0050 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CF65_02880 7c8e3c035287ddad4e47328ca31c0050 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 2.2E-45 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02880 7c8e3c035287ddad4e47328ca31c0050 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.256 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02442 0a0693fd0bea57d365251ea97c9b00dc 163 SUPERFAMILY SSF52833 27 158 3.75E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_02442 0a0693fd0bea57d365251ea97c9b00dc 163 Pfam PF00578 AhpC/TSA family 29 141 6.6E-20 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CF65_02442 0a0693fd0bea57d365251ea97c9b00dc 163 Gene3D G3DSA:3.40.30.10 18 162 1.1E-33 T 14-10-2018 CF65_00937 ba6fa4cf44524355bbffafc293e844c5 210 SUPERFAMILY SSF53067 1 208 8.1E-51 T 14-10-2018 CF65_00937 ba6fa4cf44524355bbffafc293e844c5 210 Gene3D G3DSA:3.30.420.40 1 210 1.9E-54 T 14-10-2018 CF65_00937 ba6fa4cf44524355bbffafc293e844c5 210 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 210 5.9E-70 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CF65_01603 a57bdb83fa28bb5a12fe7ef25da3f797 679 Pfam PF01432 Peptidase family M3 221 676 1.7E-168 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CF65_01603 a57bdb83fa28bb5a12fe7ef25da3f797 679 Gene3D G3DSA:1.10.1370.10 139 609 2.8E-266 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CF65_01603 a57bdb83fa28bb5a12fe7ef25da3f797 679 Gene3D G3DSA:1.10.1370.40 14 674 2.8E-266 T 14-10-2018 CF65_01603 a57bdb83fa28bb5a12fe7ef25da3f797 679 SUPERFAMILY SSF55486 1 676 5.04E-203 T 14-10-2018 CF65_00503 b6f2f6ce26b1ce2079cc88f140d89a7c 420 Pfam PF13289 SIR2-like domain 58 185 1.5E-27 T 14-10-2018 IPR039444 SIR2-like domain CF65_00503 b6f2f6ce26b1ce2079cc88f140d89a7c 420 PIRSF PIRSF014677 354 420 120.0 T 14-10-2018 IPR011202 Uncharacterised conserved protein UCP014677 CF65_00503 b6f2f6ce26b1ce2079cc88f140d89a7c 420 PIRSF PIRSF014677 6 239 6.0E-16 T 14-10-2018 IPR011202 Uncharacterised conserved protein UCP014677 CF65_02312 c797fbced516b94d045bc43cb2acb0f5 162 Gene3D G3DSA:3.30.530.20 23 162 7.7E-26 T 14-10-2018 IPR023393 START-like domain superfamily CF65_02312 c797fbced516b94d045bc43cb2acb0f5 162 SUPERFAMILY SSF55961 21 162 2.81E-22 T 14-10-2018 CF65_02312 c797fbced516b94d045bc43cb2acb0f5 162 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 30 154 2.1E-18 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 CF65_02431 09587cc4f4eeea8832b284e8e3b92b2c 71 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 35 3.0E-6 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 CF65_01619 1a316d5ce12ff3931491098b6015897b 359 Gene3D G3DSA:3.20.20.70 6 356 3.4E-161 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_01619 1a316d5ce12ff3931491098b6015897b 359 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 11 355 7.4E-172 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CF65_01619 1a316d5ce12ff3931491098b6015897b 359 SUPERFAMILY SSF51569 13 354 9.63E-133 T 14-10-2018 CF65_01619 1a316d5ce12ff3931491098b6015897b 359 PIRSF PIRSF001361 1 358 1.1E-158 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CF65_01619 1a316d5ce12ff3931491098b6015897b 359 Pfam PF00793 DAHP synthetase I family 44 344 3.2E-106 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CF65_00661 d38b631286366e3acd159cbb002a33fe 350 Gene3D G3DSA:2.40.160.10 22 350 3.3E-48 T 14-10-2018 IPR023614 Porin domain superfamily CF65_00661 d38b631286366e3acd159cbb002a33fe 350 SUPERFAMILY SSF56935 23 350 2.2E-48 T 14-10-2018 CF65_00661 d38b631286366e3acd159cbb002a33fe 350 Pfam PF13609 Gram-negative porin 9 332 5.6E-32 T 14-10-2018 CF65_00661 d38b631286366e3acd159cbb002a33fe 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 102 124 1.7E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CF65_00661 d38b631286366e3acd159cbb002a33fe 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.7E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 CF65_02644 7b5de60e7787f4fd8012a0c12fbeb581 179 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 174 1.4E-71 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CF65_02644 7b5de60e7787f4fd8012a0c12fbeb581 179 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 175 5.0E-101 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CF65_02644 7b5de60e7787f4fd8012a0c12fbeb581 179 SUPERFAMILY SSF51182 1 177 5.73E-75 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily CF65_02644 7b5de60e7787f4fd8012a0c12fbeb581 179 Gene3D G3DSA:2.60.120.10 1 178 5.4E-72 T 14-10-2018 IPR014710 RmlC-like jelly roll fold CF65_02644 7b5de60e7787f4fd8012a0c12fbeb581 179 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 175 9.9E-83 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CF65_01792 44c5b9fe6c5ec922b041515080ca25b2 150 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 5.8E-74 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CF65_01792 44c5b9fe6c5ec922b041515080ca25b2 150 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 150 86.097 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CF65_01792 44c5b9fe6c5ec922b041515080ca25b2 150 Pfam PF03477 ATP cone domain 50 134 2.3E-15 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CF65_01937 523c451c7f6e82cfb9eeca0676006459 259 Gene3D G3DSA:2.40.50.580 21 97 2.7E-23 T 14-10-2018 CF65_01937 523c451c7f6e82cfb9eeca0676006459 259 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 19 244 1.1E-67 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein CF65_01937 523c451c7f6e82cfb9eeca0676006459 259 Gene3D G3DSA:3.40.1350.60 98 251 4.2E-49 T 14-10-2018 CF65_01937 523c451c7f6e82cfb9eeca0676006459 259 Pfam PF03749 Sugar fermentation stimulation protein 30 241 4.6E-68 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein CF65_01937 523c451c7f6e82cfb9eeca0676006459 259 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 19 258 51.818 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein CF65_02656 181d8c283e72d67c53b45d96caadcd87 318 Pfam PF04230 Polysaccharide pyruvyl transferase 35 295 2.2E-21 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase CF65_02159 60654ba4170bb501f952dc9e9f9d580c 138 Pfam PF07681 DoxX 18 97 6.5E-16 T 14-10-2018 IPR032808 DoxX family CF65_00671 4441d553e23f8b455e6211fb8e20486a 88 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 60 6.3E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CF65_00671 4441d553e23f8b455e6211fb8e20486a 88 Gene3D G3DSA:2.10.260.10 1 83 7.0E-19 T 14-10-2018 CF65_00671 4441d553e23f8b455e6211fb8e20486a 88 SUPERFAMILY SSF89447 4 60 8.37E-6 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily CF65_00718 b6900cb0faee0195d3fc8c7cb12405b9 370 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 CF65_00718 b6900cb0faee0195d3fc8c7cb12405b9 370 SUPERFAMILY SSF52540 108 355 5.49E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00718 b6900cb0faee0195d3fc8c7cb12405b9 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 349 1.3E-99 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CF65_00718 b6900cb0faee0195d3fc8c7cb12405b9 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 350 36.814 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein CF65_00718 b6900cb0faee0195d3fc8c7cb12405b9 370 SUPERFAMILY SSF117916 14 84 1.05E-5 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily CF65_00718 b6900cb0faee0195d3fc8c7cb12405b9 370 Gene3D G3DSA:3.40.50.300 93 348 5.6E-80 T 14-10-2018 CF65_00721 790067809a662ae31451e71f882c2c3c 381 PRINTS PR00738 Glycosyl hydrolase family 20 signature 342 358 2.5E-18 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CF65_00721 790067809a662ae31451e71f882c2c3c 381 PRINTS PR00738 Glycosyl hydrolase family 20 signature 59 80 2.5E-18 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CF65_00721 790067809a662ae31451e71f882c2c3c 381 PRINTS PR00738 Glycosyl hydrolase family 20 signature 123 140 2.5E-18 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CF65_00721 790067809a662ae31451e71f882c2c3c 381 PRINTS PR00738 Glycosyl hydrolase family 20 signature 30 47 2.5E-18 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CF65_00721 790067809a662ae31451e71f882c2c3c 381 PRINTS PR00738 Glycosyl hydrolase family 20 signature 169 187 2.5E-18 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CF65_00721 790067809a662ae31451e71f882c2c3c 381 PRINTS PR00738 Glycosyl hydrolase family 20 signature 193 206 2.5E-18 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CF65_00721 790067809a662ae31451e71f882c2c3c 381 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 40 354 2.6E-35 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 CF65_00721 790067809a662ae31451e71f882c2c3c 381 Gene3D G3DSA:3.20.20.80 21 381 8.9E-134 T 14-10-2018 CF65_00721 790067809a662ae31451e71f882c2c3c 381 SUPERFAMILY SSF51445 39 376 4.91E-72 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily CF65_01039 d7f10f7b49969946e77477ed744ad73d 103 Gene3D G3DSA:3.30.300.90 1 89 1.3E-27 T 14-10-2018 CF65_01039 d7f10f7b49969946e77477ed744ad73d 103 SUPERFAMILY SSF82657 2 89 5.89E-26 T 14-10-2018 IPR036065 BolA-like superfamily CF65_01039 d7f10f7b49969946e77477ed744ad73d 103 Pfam PF01722 BolA-like protein 11 84 2.4E-24 T 14-10-2018 IPR002634 BolA protein CF65_01039 d7f10f7b49969946e77477ed744ad73d 103 PIRSF PIRSF003113 1 100 6.9E-30 T 14-10-2018 IPR002634 BolA protein CF65_00900 c2ab33d1cf45db332abbf6bd8bbb24fa 84 SUPERFAMILY SSF109910 3 77 1.31E-23 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily CF65_00900 c2ab33d1cf45db332abbf6bd8bbb24fa 84 Pfam PF03937 Flavinator of succinate dehydrogenase 8 76 5.8E-22 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase CF65_00900 c2ab33d1cf45db332abbf6bd8bbb24fa 84 Gene3D G3DSA:1.10.150.250 1 82 4.3E-27 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily CF65_00105 ca7f277ae172df7c22f83781e3d2d413 351 Pfam PF13413 Helix-turn-helix domain 23 83 1.7E-14 T 14-10-2018 CF65_00105 ca7f277ae172df7c22f83781e3d2d413 351 Gene3D G3DSA:1.10.260.40 7 116 4.0E-17 T 14-10-2018 CF65_00105 ca7f277ae172df7c22f83781e3d2d413 351 Pfam PF13464 Domain of unknown function (DUF4115) 280 349 3.9E-16 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 CF65_00822 8bdc90a650e60ff66d00e0d9087f6d1b 114 SUPERFAMILY SSF52833 1 113 5.22E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_00822 8bdc90a650e60ff66d00e0d9087f6d1b 114 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 111 1.3E-29 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR CF65_00822 8bdc90a650e60ff66d00e0d9087f6d1b 114 Gene3D G3DSA:3.40.30.10 1 114 2.8E-42 T 14-10-2018 CF65_00822 8bdc90a650e60ff66d00e0d9087f6d1b 114 Pfam PF03960 ArsC family 5 111 4.7E-20 T 14-10-2018 IPR006660 Arsenate reductase-like CF65_00374 628c640b9f45e84db9d0139b2b0fe850 447 TIGRFAM TIGR00366 TIGR00366: TIGR00366 family protein 4 435 1.2E-224 T 14-10-2018 IPR006161 Conserved hypothetical protein CHP00336 CF65_00374 628c640b9f45e84db9d0139b2b0fe850 447 Pfam PF02667 Short chain fatty acid transporter 1 447 1.1E-229 T 14-10-2018 IPR006160 Short chain fatty acid transporter AtoE CF65_02636 e970f4053203f8bc8adbb1a8252843fe 234 SUPERFAMILY SSF53448 1 226 8.44E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02636 e970f4053203f8bc8adbb1a8252843fe 234 Pfam PF00535 Glycosyl transferase family 2 6 161 2.2E-22 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CF65_02636 e970f4053203f8bc8adbb1a8252843fe 234 Gene3D G3DSA:3.90.550.10 1 233 9.0E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00807 bd1c2510ad4a328b4a8f1fe31c0480ea 114 Pfam PF02313 Fumarate reductase subunit D 6 111 2.6E-42 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CF65_00807 bd1c2510ad4a328b4a8f1fe31c0480ea 114 PIRSF PIRSF000179 1 114 1.6E-48 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CF65_00807 bd1c2510ad4a328b4a8f1fe31c0480ea 114 SUPERFAMILY SSF81343 1 114 1.5E-47 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00807 bd1c2510ad4a328b4a8f1fe31c0480ea 114 Gene3D G3DSA:1.20.1300.10 1 114 8.1E-38 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CF65_00807 bd1c2510ad4a328b4a8f1fe31c0480ea 114 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 114 24.988 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CF65_00807 bd1c2510ad4a328b4a8f1fe31c0480ea 114 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 114 2.0E-42 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CF65_02084 aa9510c6a7160853b551346fa40bae68 144 PIRSF PIRSF006173 1 144 1.2E-54 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 CF65_01401 dc1c2403fb43dcca1d985dd199abb81b 427 Pfam PF00534 Glycosyl transferases group 1 237 401 1.8E-13 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 CF65_01401 dc1c2403fb43dcca1d985dd199abb81b 427 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 2.3E-59 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CF65_01401 dc1c2403fb43dcca1d985dd199abb81b 427 Gene3D G3DSA:3.40.50.11720 35 211 5.0E-42 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CF65_01401 dc1c2403fb43dcca1d985dd199abb81b 427 SUPERFAMILY SSF53756 53 425 2.78E-19 T 14-10-2018 CF65_01401 dc1c2403fb43dcca1d985dd199abb81b 427 Gene3D G3DSA:3.40.50.2000 219 406 1.4E-64 T 14-10-2018 CF65_01855 cb5bc47facef74236719cf3ac1a739f6 99 SUPERFAMILY SSF47413 20 92 5.35E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_01855 cb5bc47facef74236719cf3ac1a739f6 99 SMART SM00530 31 86 2.0E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CF65_01855 cb5bc47facef74236719cf3ac1a739f6 99 Pfam PF13744 Helix-turn-helix domain 17 88 3.5E-12 T 14-10-2018 IPR039554 HigA2-like, helix-turn-helix domain CF65_01855 cb5bc47facef74236719cf3ac1a739f6 99 Gene3D G3DSA:1.10.260.40 5 89 1.1E-12 T 14-10-2018 CF65_01902 b573261c920972024e81c7739a09ad81 180 Pfam PF02498 BRO family, N-terminal domain 15 99 5.4E-9 T 14-10-2018 IPR003497 BRO N-terminal domain CF65_01902 b573261c920972024e81c7739a09ad81 180 SMART SM01040 10 103 9.9E-21 T 14-10-2018 IPR003497 BRO N-terminal domain CF65_01189 55546344e060a3a562925adeae424139 308 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 105 300 2.8E-15 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CF65_01189 55546344e060a3a562925adeae424139 308 PIRSF PIRSF028561 1 308 1.1E-77 T 14-10-2018 IPR014548 Predicted acyltransferase CF65_01071 d7195ec661b03335beab82950f22be7c 405 SUPERFAMILY SSF53335 43 404 1.02E-86 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01071 d7195ec661b03335beab82950f22be7c 405 Gene3D G3DSA:3.40.1350.30 101 237 5.7E-112 T 14-10-2018 CF65_01071 d7195ec661b03335beab82950f22be7c 405 Gene3D G3DSA:3.40.50.150 55 399 5.7E-112 T 14-10-2018 CF65_01071 d7195ec661b03335beab82950f22be7c 405 Gene3D G3DSA:2.40.50.140 1 54 4.6E-17 T 14-10-2018 CF65_01071 d7195ec661b03335beab82950f22be7c 405 SUPERFAMILY SSF50249 2 41 6.85E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold CF65_01071 d7195ec661b03335beab82950f22be7c 405 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 336 366 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site CF65_01071 d7195ec661b03335beab82950f22be7c 405 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 71 404 8.3E-30 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CF65_01071 d7195ec661b03335beab82950f22be7c 405 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 1 397 4.5E-143 T 14-10-2018 CF65_01071 d7195ec661b03335beab82950f22be7c 405 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 1 405 59.494 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CF65_01071 d7195ec661b03335beab82950f22be7c 405 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 387 397 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site CF65_00979 91d286535e6e432235f2fed26a0c1c7e 110 Pfam PF00135 Carboxylesterase family 1 97 5.5E-14 T 14-10-2018 IPR002018 Carboxylesterase, type B CF65_00979 91d286535e6e432235f2fed26a0c1c7e 110 SUPERFAMILY SSF53474 1 92 3.51E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_00979 91d286535e6e432235f2fed26a0c1c7e 110 Gene3D G3DSA:3.40.50.1820 1 106 1.3E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold CF65_01236 ebe88fb087a157e18f87349045239f21 144 Gene3D G3DSA:3.100.10.10 67 144 1.9E-14 T 14-10-2018 CF65_01236 ebe88fb087a157e18f87349045239f21 144 SUPERFAMILY SSF52080 4 143 1.96E-45 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily CF65_01236 ebe88fb087a157e18f87349045239f21 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.4E-31 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P CF65_01236 ebe88fb087a157e18f87349045239f21 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CF65_01236 ebe88fb087a157e18f87349045239f21 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 6.8E-52 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_01236 ebe88fb087a157e18f87349045239f21 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.78 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CF65_00252 62c7f7dc1d6ece8422ab2dc18e033102 80 Pfam PF04359 Protein of unknown function (DUF493) 1 80 1.7E-27 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 CF65_00252 62c7f7dc1d6ece8422ab2dc18e033102 80 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 80 22.416 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 CF65_00252 62c7f7dc1d6ece8422ab2dc18e033102 80 Gene3D G3DSA:3.30.70.260 1 80 8.7E-29 T 14-10-2018 CF65_00252 62c7f7dc1d6ece8422ab2dc18e033102 80 SUPERFAMILY SSF117991 1 80 3.53E-27 T 14-10-2018 IPR027471 YbeD-like domain superfamily CF65_02355 bf9aa15fbb31885d4a16510b510df00a 470 PIRSF PIRSF005943 8 470 8.5E-177 T 14-10-2018 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 CF65_02355 bf9aa15fbb31885d4a16510b510df00a 470 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 181 453 8.5E-65 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CF65_02355 bf9aa15fbb31885d4a16510b510df00a 470 Gene3D G3DSA:3.20.20.70 147 398 3.3E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02355 bf9aa15fbb31885d4a16510b510df00a 470 SUPERFAMILY SSF51690 180 468 2.75E-40 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CF65_00906 fdbf0a5fea347d90875d020b859bcf54 318 Pfam PF03888 MucB/RseB N-terminal domain 29 197 9.1E-61 T 14-10-2018 IPR033434 MucB/RseB, N-terminal CF65_00906 fdbf0a5fea347d90875d020b859bcf54 318 PIRSF PIRSF005427 1 318 2.9E-79 T 14-10-2018 IPR005588 MucB/RseB CF65_00906 fdbf0a5fea347d90875d020b859bcf54 318 Gene3D G3DSA:2.50.20.10 28 211 2.4E-50 T 14-10-2018 CF65_00906 fdbf0a5fea347d90875d020b859bcf54 318 Pfam PF17188 MucB/RseB C-terminal domain 222 315 2.4E-26 T 14-10-2018 IPR033436 MucB/RseB, C-terminal CF65_00906 fdbf0a5fea347d90875d020b859bcf54 318 Gene3D G3DSA:3.30.200.100 222 318 5.6E-27 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily CF65_02687 c8a4f3fdc76e0e95dd68210c656e3fdb 481 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 108 128 7.9E-32 T 14-10-2018 CF65_02687 c8a4f3fdc76e0e95dd68210c656e3fdb 481 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 74 99 7.9E-32 T 14-10-2018 CF65_02687 c8a4f3fdc76e0e95dd68210c656e3fdb 481 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 154 175 7.9E-32 T 14-10-2018 CF65_02687 c8a4f3fdc76e0e95dd68210c656e3fdb 481 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 7.9E-32 T 14-10-2018 CF65_02687 c8a4f3fdc76e0e95dd68210c656e3fdb 481 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 215 236 7.9E-32 T 14-10-2018 CF65_02687 c8a4f3fdc76e0e95dd68210c656e3fdb 481 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 237 263 7.9E-32 T 14-10-2018 CF65_02687 c8a4f3fdc76e0e95dd68210c656e3fdb 481 Pfam PF00361 Proton-conducting membrane transporter 133 412 1.5E-55 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_02687 c8a4f3fdc76e0e95dd68210c656e3fdb 481 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 118 2.6E-7 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CF65_00952 6d630454b325ffb0aadf6ac26fb0f1ab 425 SUPERFAMILY SSF48452 87 365 9.7E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00952 6d630454b325ffb0aadf6ac26fb0f1ab 425 SUPERFAMILY SSF48371 205 364 4.6E-5 T 14-10-2018 IPR016024 Armadillo-type fold CF65_00952 6d630454b325ffb0aadf6ac26fb0f1ab 425 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 395 6.8E-114 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 CF65_00952 6d630454b325ffb0aadf6ac26fb0f1ab 425 Gene3D G3DSA:1.25.40.10 61 400 3.1E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00952 6d630454b325ffb0aadf6ac26fb0f1ab 425 Pfam PF07219 HemY protein N-terminus 26 132 2.4E-31 T 14-10-2018 IPR010817 HemY, N-terminal CF65_01722 1f61313bf91fe88dcef44a4d90ce7d05 42 Gene3D G3DSA:2.30.130.30 1 42 6.5E-14 T 14-10-2018 CF65_01722 1f61313bf91fe88dcef44a4d90ce7d05 42 Pfam PF04266 ASCH domain 2 38 2.5E-5 T 14-10-2018 IPR007374 ASCH domain CF65_01722 1f61313bf91fe88dcef44a4d90ce7d05 42 SUPERFAMILY SSF88697 1 35 2.48E-8 T 14-10-2018 IPR015947 PUA-like superfamily CF65_02840 625f2398ae5d5bc0cb215457b4395058 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 5.5E-183 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CF65_02840 625f2398ae5d5bc0cb215457b4395058 378 PIRSF PIRSF000267 2 377 3.9E-122 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CF65_02840 625f2398ae5d5bc0cb215457b4395058 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 3.6E-101 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CF65_02647 1efbe171643cd126791ab4f95299c6cf 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 328 6.3E-100 T 14-10-2018 IPR016040 NAD(P)-binding domain CF65_02647 1efbe171643cd126791ab4f95299c6cf 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 5 341 3.5E-159 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CF65_02647 1efbe171643cd126791ab4f95299c6cf 355 Gene3D G3DSA:3.90.25.10 203 335 1.6E-138 T 14-10-2018 CF65_02647 1efbe171643cd126791ab4f95299c6cf 355 Gene3D G3DSA:3.40.50.720 5 327 1.6E-138 T 14-10-2018 CF65_02647 1efbe171643cd126791ab4f95299c6cf 355 SUPERFAMILY SSF51735 3 339 7.27E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01776 9a45e6847f3226e15c8efc57a6035320 355 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 352 3.4E-78 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CF65_01776 9a45e6847f3226e15c8efc57a6035320 355 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 3 352 1.4E-136 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CF65_02754 81be9e748eb498728182733cd2b5f92c 110 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 8 102 24.633 T 14-10-2018 IPR007458 Protein of unknown function DUF496 CF65_02754 81be9e748eb498728182733cd2b5f92c 110 PIRSF PIRSF028773 1 110 7.4E-49 T 14-10-2018 IPR007458 Protein of unknown function DUF496 CF65_02754 81be9e748eb498728182733cd2b5f92c 110 Pfam PF04363 Protein of unknown function (DUF496) 8 99 4.5E-43 T 14-10-2018 IPR007458 Protein of unknown function DUF496 CF65_02754 81be9e748eb498728182733cd2b5f92c 110 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 103 7.0E-36 T 14-10-2018 IPR007458 Protein of unknown function DUF496 CF65_00750 28568c1f250f95b32fbf0268e56ad1e8 330 SUPERFAMILY SSF53822 26 329 4.35E-79 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_00750 28568c1f250f95b32fbf0268e56ad1e8 330 Gene3D G3DSA:3.40.50.2300 134 278 8.3E-109 T 14-10-2018 CF65_00750 28568c1f250f95b32fbf0268e56ad1e8 330 Gene3D G3DSA:3.40.50.2300 28 301 8.3E-109 T 14-10-2018 CF65_00750 28568c1f250f95b32fbf0268e56ad1e8 330 Pfam PF13407 Periplasmic binding protein domain 28 298 7.7E-62 T 14-10-2018 IPR025997 Periplasmic binding protein CF65_00632 ad49b64e0e70269aeba9738c0037509b 149 Pfam PF00717 Peptidase S24-like 55 122 2.5E-5 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CF65_00632 ad49b64e0e70269aeba9738c0037509b 149 Gene3D G3DSA:2.10.109.10 23 141 4.8E-18 T 14-10-2018 CF65_00632 ad49b64e0e70269aeba9738c0037509b 149 SUPERFAMILY SSF51306 34 137 3.49E-20 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CF65_00075 4a6bbc83d6a73feb92ee2374e0f17944 198 SMART SM01207 10 185 1.1E-86 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CF65_00075 4a6bbc83d6a73feb92ee2374e0f17944 198 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.133 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CF65_00075 4a6bbc83d6a73feb92ee2374e0f17944 198 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 1.8E-82 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CF65_00075 4a6bbc83d6a73feb92ee2374e0f17944 198 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 2.1E-51 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CF65_01131 0720c71cf749642694422bbc4abf5391 59 Gene3D G3DSA:1.10.8.1050 1 57 1.2E-6 T 14-10-2018 CF65_01146 b7131fc2bfd914ec5f16973ccfcf3a96 86 PIRSF PIRSF037291 1 86 1.1E-31 T 14-10-2018 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related CF65_01146 b7131fc2bfd914ec5f16973ccfcf3a96 86 SUPERFAMILY SSF52833 4 82 3.06E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_01299 aa1308c261089732d1f90384829fc027 159 ProDom PD415499 COMPETENCE C COMC DNA TRANSFORMATION PROTEIN 10 159 3.0E-14 T 14-10-2018 CF65_00919 8096a42a6618d7b864b89082f856ae2f 810 Pfam PF03968 OstA-like protein 82 220 5.8E-24 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal CF65_00919 8096a42a6618d7b864b89082f856ae2f 810 Gene3D G3DSA:2.60.450.10 75 169 1.1E-7 T 14-10-2018 CF65_00919 8096a42a6618d7b864b89082f856ae2f 810 Pfam PF04453 Organic solvent tolerance protein 330 719 8.6E-106 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CF65_00919 8096a42a6618d7b864b89082f856ae2f 810 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 38 786 19.819 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 PRINTS PR00166 Aromatic amino acid permease signature 81 101 6.6E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 PRINTS PR00166 Aromatic amino acid permease signature 9 32 6.6E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 PRINTS PR00166 Aromatic amino acid permease signature 36 55 6.6E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 PRINTS PR00166 Aromatic amino acid permease signature 181 203 6.6E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 PRINTS PR00166 Aromatic amino acid permease signature 337 356 6.6E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 PRINTS PR00166 Aromatic amino acid permease signature 147 167 6.6E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 PRINTS PR00166 Aromatic amino acid permease signature 281 300 6.6E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 PRINTS PR00166 Aromatic amino acid permease signature 220 239 6.6E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 PRINTS PR00166 Aromatic amino acid permease signature 316 334 6.6E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 Gene3D G3DSA:1.20.1740.10 3 403 1.5E-8 T 14-10-2018 CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 6 384 2.8E-135 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 16 32 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CF65_01704 008fb45ec42d2ccb94e169c747342fe4 404 Pfam PF03222 Tryptophan/tyrosine permease family 2 389 3.0E-131 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CF65_00303 df724eb2c37ef54d075fa76a93800605 210 Gene3D G3DSA:3.40.50.300 1 206 6.6E-64 T 14-10-2018 CF65_00303 df724eb2c37ef54d075fa76a93800605 210 SUPERFAMILY SSF52540 3 204 5.41E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00303 df724eb2c37ef54d075fa76a93800605 210 Pfam PF02223 Thymidylate kinase 8 197 1.1E-59 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CF65_00303 df724eb2c37ef54d075fa76a93800605 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 197 4.0E-69 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CF65_00303 df724eb2c37ef54d075fa76a93800605 210 Hamap MF_00165 Thymidylate kinase [tmk]. 4 205 28.238 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CF65_00303 df724eb2c37ef54d075fa76a93800605 210 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CF65_01344 b1dd83ec13566b5f7d889c203ae9a202 315 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 2 315 2.6E-106 T 14-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 CF65_01344 b1dd83ec13566b5f7d889c203ae9a202 315 Gene3D G3DSA:1.20.58.340 239 315 1.6E-25 T 14-10-2018 CF65_01344 b1dd83ec13566b5f7d889c203ae9a202 315 SUPERFAMILY SSF143865 1 254 2.09E-36 T 14-10-2018 CF65_01344 b1dd83ec13566b5f7d889c203ae9a202 315 SUPERFAMILY SSF144083 250 313 6.41E-21 T 14-10-2018 CF65_01344 b1dd83ec13566b5f7d889c203ae9a202 315 Pfam PF01544 CorA-like Mg2+ transporter protein 24 311 9.7E-55 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CF65_01209 5df90cf11fb447735a3d57437d5999e3 166 Pfam PF16747 Surface-adhesin protein E 40 164 8.1E-61 T 14-10-2018 IPR031939 Surface-adhesin protein E-like CF65_01209 5df90cf11fb447735a3d57437d5999e3 166 Gene3D G3DSA:3.10.129.80 35 165 7.3E-58 T 14-10-2018 CF65_01209 5df90cf11fb447735a3d57437d5999e3 166 PIRSF PIRSF012320 1 165 7.5E-55 T 14-10-2018 IPR016595 Surface-adhesin protein E, Pasteurellaceae CF65_01846 ecff3a376d425c3c0ce7f0ba76b85fd6 81 Pfam PF10688 Bacterial inner membrane protein 7 72 2.4E-6 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV CF65_01846 ecff3a376d425c3c0ce7f0ba76b85fd6 81 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 5 68 2.0E-19 T 14-10-2018 IPR020137 Uncharacterised protein family HI1736 CF65_01168 071667afdaa0a0087a49a042f7cb44e1 232 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 230 4.1E-54 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 CF65_01168 071667afdaa0a0087a49a042f7cb44e1 232 SUPERFAMILY SSF100950 1 232 2.15E-63 T 14-10-2018 IPR037171 NagB/RpiA transferase-like CF65_01168 071667afdaa0a0087a49a042f7cb44e1 232 ProDom PD884061 6-PHOSPHOGLUCONOLACTONASE HYDROLASE 6PGL HI0557 1 28 2.0E-8 T 14-10-2018 CF65_01168 071667afdaa0a0087a49a042f7cb44e1 232 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 222 5.1E-58 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CF65_01168 071667afdaa0a0087a49a042f7cb44e1 232 Gene3D G3DSA:3.40.50.1360 1 232 1.9E-80 T 14-10-2018 CF65_02756 677baa9a640b9ce63aa2fd9d7bdabb30 360 PIRSF PIRSF000525 1 360 2.6E-142 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CF65_02756 677baa9a640b9ce63aa2fd9d7bdabb30 360 Gene3D G3DSA:3.40.640.10 17 250 3.7E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_02756 677baa9a640b9ce63aa2fd9d7bdabb30 360 Gene3D G3DSA:3.90.1150.10 251 360 1.5E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_02756 677baa9a640b9ce63aa2fd9d7bdabb30 360 SUPERFAMILY SSF53383 4 358 5.12E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02756 677baa9a640b9ce63aa2fd9d7bdabb30 360 Pfam PF00266 Aminotransferase class-V 4 348 1.1E-63 T 14-10-2018 IPR000192 Aminotransferase class V domain CF65_02756 677baa9a640b9ce63aa2fd9d7bdabb30 360 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CF65_02756 677baa9a640b9ce63aa2fd9d7bdabb30 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 48.43 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CF65_02756 677baa9a640b9ce63aa2fd9d7bdabb30 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 9.7E-156 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CF65_00709 247b79b5f2f9e2215169aef42df55fa2 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.2E-69 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CF65_00709 247b79b5f2f9e2215169aef42df55fa2 127 SUPERFAMILY SSF82649 1 125 1.23E-47 T 14-10-2018 CF65_00709 247b79b5f2f9e2215169aef42df55fa2 127 Pfam PF01592 NifU-like N terminal domain 2 125 9.7E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CF65_00709 247b79b5f2f9e2215169aef42df55fa2 127 Gene3D G3DSA:3.90.1010.10 1 127 6.9E-59 T 14-10-2018 CF65_02921 81d91d00e9263a1ff22a2cb9c99ddd25 107 SUPERFAMILY SSF140931 69 107 2.49E-7 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_02921 81d91d00e9263a1ff22a2cb9c99ddd25 107 Gene3D G3DSA:1.10.3290.10 20 107 9.0E-24 T 14-10-2018 IPR036597 Fido-like domain superfamily CF65_00934 5136d630c4824b26b052129fa36e1b49 154 SUPERFAMILY SSF52540 3 139 3.96E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00934 5136d630c4824b26b052129fa36e1b49 154 Gene3D G3DSA:3.40.50.300 1 149 4.1E-28 T 14-10-2018 CF65_00934 5136d630c4824b26b052129fa36e1b49 154 Pfam PF00005 ABC transporter 5 82 3.3E-8 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_01672 665bca99a53d4cb2134c7b3fd9dacfa5 98 SUPERFAMILY SSF47413 30 89 5.7E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_01672 665bca99a53d4cb2134c7b3fd9dacfa5 98 Gene3D G3DSA:1.10.260.40 35 91 1.1E-5 T 14-10-2018 CF65_01672 665bca99a53d4cb2134c7b3fd9dacfa5 98 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 5 91 4.2E-38 T 14-10-2018 IPR014057 Uncharacterized protein HI1420 CF65_01672 665bca99a53d4cb2134c7b3fd9dacfa5 98 Pfam PF01381 Helix-turn-helix 47 90 4.9E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CF65_01458 8bf1d1f6c021d2264c6fe41202ae8f79 398 Gene3D G3DSA:3.90.1150.10 13 381 7.7E-118 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_01458 8bf1d1f6c021d2264c6fe41202ae8f79 398 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 385 3.4E-112 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 CF65_01458 8bf1d1f6c021d2264c6fe41202ae8f79 398 Pfam PF00155 Aminotransferase class I and II 30 368 1.0E-28 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CF65_01458 8bf1d1f6c021d2264c6fe41202ae8f79 398 SUPERFAMILY SSF53383 4 384 7.17E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_01458 8bf1d1f6c021d2264c6fe41202ae8f79 398 Gene3D G3DSA:3.40.640.10 67 289 7.7E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CF65_02543 5a35467a5bc84cf82799c32751e5c5d0 218 Pfam PF06250 Protein of unknown function (DUF1016) 77 185 3.9E-51 T 14-10-2018 IPR009362 Protein of unknown function DUF1016 CF65_00153 ddfe9f829d2eb18476f88f8152099d7b 156 SUPERFAMILY SSF51197 1 154 2.75E-46 T 14-10-2018 CF65_00153 ddfe9f829d2eb18476f88f8152099d7b 156 Pfam PF04074 Domain of unknown function (DUF386) 1 151 1.1E-41 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family CF65_00153 ddfe9f829d2eb18476f88f8152099d7b 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 155 5.6E-54 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family CF65_00153 ddfe9f829d2eb18476f88f8152099d7b 156 Gene3D G3DSA:2.60.120.370 1 155 4.1E-51 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily CF65_02631 7665b3cc831c8b267340c754d0aff05c 472 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 26 472 1.3E-113 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CF65_02631 7665b3cc831c8b267340c754d0aff05c 472 Pfam PF02397 Bacterial sugar transferase 276 466 3.1E-64 T 14-10-2018 IPR003362 Bacterial sugar transferase CF65_02631 7665b3cc831c8b267340c754d0aff05c 472 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 16 472 1.1E-182 T 14-10-2018 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 CF65_02649 87211cf14db5b509cc778d4e55675b89 261 SUPERFAMILY SSF53448 9 221 8.89E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02649 87211cf14db5b509cc778d4e55675b89 261 Pfam PF00535 Glycosyl transferase family 2 7 164 1.6E-26 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CF65_02649 87211cf14db5b509cc778d4e55675b89 261 Gene3D G3DSA:3.90.550.10 5 207 8.4E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01871 5f9487d45140554e4adea598d56ba362 136 Pfam PF06295 Protein of unknown function (DUF1043) 12 133 1.1E-45 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 CF65_01871 5f9487d45140554e4adea598d56ba362 136 PIRSF PIRSF006318 2 136 1.5E-49 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 CF65_01841 d97c78ce1d73c227a23598f9cd797c80 90 SUPERFAMILY SSF53335 2 87 9.97E-7 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_00189 d3dad4aaa796410daa5e05d2c9717d78 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 7.2E-81 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CF65_00189 d3dad4aaa796410daa5e05d2c9717d78 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.248 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CF65_00189 d3dad4aaa796410daa5e05d2c9717d78 285 SUPERFAMILY SSF52096 14 280 3.96E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CF65_00189 d3dad4aaa796410daa5e05d2c9717d78 285 Gene3D G3DSA:1.10.12.10 223 273 5.4E-30 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CF65_00189 d3dad4aaa796410daa5e05d2c9717d78 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CF65_00189 d3dad4aaa796410daa5e05d2c9717d78 285 Gene3D G3DSA:3.90.226.10 1 222 3.4E-85 T 14-10-2018 CF65_00189 d3dad4aaa796410daa5e05d2c9717d78 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 4.0E-147 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CF65_01457 2a6cbef3a1a01483e9db73d3df0d3cde 375 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 365 1.4E-51 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CF65_02225 9513a2f70f1bf0a480302ad9534826bc 437 Gene3D G3DSA:3.40.50.300 198 425 2.5E-40 T 14-10-2018 CF65_02225 9513a2f70f1bf0a480302ad9534826bc 437 ProSitePatterns PS00211 ABC transporters family signature. 332 346 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02225 9513a2f70f1bf0a480302ad9534826bc 437 SUPERFAMILY SSF52540 5 158 7.38E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02225 9513a2f70f1bf0a480302ad9534826bc 437 Pfam PF00005 ABC transporter 10 97 3.7E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02225 9513a2f70f1bf0a480302ad9534826bc 437 Gene3D G3DSA:3.40.50.300 1 172 1.9E-31 T 14-10-2018 CF65_02225 9513a2f70f1bf0a480302ad9534826bc 437 Pfam PF00005 ABC transporter 208 359 3.0E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02225 9513a2f70f1bf0a480302ad9534826bc 437 SMART SM00382 216 408 1.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02225 9513a2f70f1bf0a480302ad9534826bc 437 SUPERFAMILY SSF52540 193 418 3.2E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02651 4c2067368e22c987cd9e08bcc200b8c9 293 Pfam PF00535 Glycosyl transferase family 2 3 124 8.9E-31 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CF65_02651 4c2067368e22c987cd9e08bcc200b8c9 293 SUPERFAMILY SSF53448 1 214 1.38E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02651 4c2067368e22c987cd9e08bcc200b8c9 293 Gene3D G3DSA:3.90.550.10 1 246 3.5E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01379 70c2dc5d3feb3eb5725b9f91c0a2f1dd 360 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 351 2.5E-73 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CF65_01379 70c2dc5d3feb3eb5725b9f91c0a2f1dd 360 Gene3D G3DSA:3.20.20.190 29 357 5.3E-120 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CF65_01379 70c2dc5d3feb3eb5725b9f91c0a2f1dd 360 SUPERFAMILY SSF51695 32 356 2.17E-91 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CF65_02384 092fe74c9469018db6ff958c4612a652 314 Gene3D G3DSA:3.40.1190.20 1 312 5.5E-76 T 14-10-2018 IPR029056 Ribokinase-like CF65_02384 092fe74c9469018db6ff958c4612a652 314 Pfam PF00294 pfkB family carbohydrate kinase 1 302 2.3E-73 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB CF65_02384 092fe74c9469018db6ff958c4612a652 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CF65_02384 092fe74c9469018db6ff958c4612a652 314 SUPERFAMILY SSF53613 1 301 3.12E-70 T 14-10-2018 IPR029056 Ribokinase-like CF65_00873 8bf4af916a8c9cea0562f86c12eb72c2 374 Gene3D G3DSA:3.40.50.300 143 349 2.6E-7 T 14-10-2018 CF65_00873 8bf4af916a8c9cea0562f86c12eb72c2 374 SUPERFAMILY SSF52540 144 321 4.02E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00274 0f361aaf6910637aad4da8d4ad6ce9eb 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.807 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00274 0f361aaf6910637aad4da8d4ad6ce9eb 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 4.3E-21 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_00274 0f361aaf6910637aad4da8d4ad6ce9eb 56 SUPERFAMILY SSF57829 2 55 2.87E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CF65_00274 0f361aaf6910637aad4da8d4ad6ce9eb 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.9E-21 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CF65_02526 3f7824060fdb32d2599e3eba4fb6a4d0 98 Pfam PF06305 Lipopolysaccharide assembly protein A domain 24 86 3.2E-18 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CF65_02526 3f7824060fdb32d2599e3eba4fb6a4d0 98 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 2 95 21.78 T 14-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 CF65_02071 3bdbfda12032e6414f6edb8a8003e4a0 243 Gene3D G3DSA:3.40.50.300 2 178 1.1E-10 T 14-10-2018 CF65_02071 3bdbfda12032e6414f6edb8a8003e4a0 243 Pfam PF07693 KAP family P-loop domain 7 146 2.1E-4 T 14-10-2018 IPR011646 KAP family P-loop domain CF65_02071 3bdbfda12032e6414f6edb8a8003e4a0 243 SUPERFAMILY SSF52540 6 178 3.66E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00971 2c2e7dc719a71921cb2cfbc93b999813 196 Pfam PF04222 Protein of unknown function (DUF416) 4 192 7.7E-79 T 14-10-2018 IPR007338 Protein of unknown function DUF416 CF65_00971 2c2e7dc719a71921cb2cfbc93b999813 196 Gene3D G3DSA:1.20.1590.10 1 196 7.6E-65 T 14-10-2018 IPR023381 YP001051499.1-like domain superfamily CF65_01337 fd0260a89f9ecbdf0d696bea4d270cb0 239 Pfam PF05036 Sporulation related domain 170 237 1.7E-15 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 CF65_01337 fd0260a89f9ecbdf0d696bea4d270cb0 239 Gene3D G3DSA:3.30.70.1070 164 238 4.2E-22 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CF65_01337 fd0260a89f9ecbdf0d696bea4d270cb0 239 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 1 230 1.4E-39 T 14-10-2018 IPR011930 Cell division protein FtsN GO:0005515 CF65_01337 fd0260a89f9ecbdf0d696bea4d270cb0 239 SUPERFAMILY SSF110997 169 230 4.71E-16 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CF65_01696 7eb4420756ae091e62886994f2735720 363 Pfam PF13483 Beta-lactamase superfamily domain 42 290 3.4E-10 T 14-10-2018 CF65_01696 7eb4420756ae091e62886994f2735720 363 Gene3D G3DSA:3.60.15.10 3 363 1.0E-101 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CF65_01696 7eb4420756ae091e62886994f2735720 363 SUPERFAMILY SSF56281 35 314 3.25E-23 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CF65_00744 454107ed53ed29b2f944a40c13f60241 343 PIRSF PIRSF005096 1 343 1.1E-111 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CF65_00744 454107ed53ed29b2f944a40c13f60241 343 Pfam PF01263 Aldose 1-epimerase 19 339 5.1E-89 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CF65_00744 454107ed53ed29b2f944a40c13f60241 343 SUPERFAMILY SSF74650 7 340 6.91E-101 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CF65_00744 454107ed53ed29b2f944a40c13f60241 343 Gene3D G3DSA:2.70.98.10 11 342 3.1E-107 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CF65_00744 454107ed53ed29b2f944a40c13f60241 343 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 14 341 1.4E-141 T 14-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CF65_00744 454107ed53ed29b2f944a40c13f60241 343 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 169 178 - T 14-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CF65_02679 008689bc1c3cae10775e1a2e3edad842 84 SUPERFAMILY SSF81342 2 60 2.98E-14 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CF65_02679 008689bc1c3cae10775e1a2e3edad842 84 Gene3D G3DSA:1.20.950.20 1 72 7.0E-19 T 14-10-2018 CF65_02042 f2dc0930758b54a6daf4015a6b8a5351 316 Gene3D G3DSA:3.20.20.70 2 316 2.6E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_02042 f2dc0930758b54a6daf4015a6b8a5351 316 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 316 158.21 T 14-10-2018 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CF65_02042 f2dc0930758b54a6daf4015a6b8a5351 316 SMART SM01133 19 276 1.2E-22 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CF65_02042 f2dc0930758b54a6daf4015a6b8a5351 316 SUPERFAMILY SSF51569 5 308 1.39E-56 T 14-10-2018 CF65_02042 f2dc0930758b54a6daf4015a6b8a5351 316 Pfam PF01791 DeoC/LacD family aldolase 21 275 4.1E-52 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CF65_01552 0c44e97fbaa724fdf724ff4f45e8cb8f 76 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 21 67 7.0E-6 T 14-10-2018 CF65_01552 0c44e97fbaa724fdf724ff4f45e8cb8f 76 Pfam PF13617 YnbE-like lipoprotein 13 63 6.6E-20 T 14-10-2018 IPR025985 YnbE-like lipoprotein CF65_01601 182accc93b201cce8d73949f518fe95d 166 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 20 140 1.3E-49 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CF65_01601 182accc93b201cce8d73949f518fe95d 166 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 19 143 2.7E-48 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CF65_01601 182accc93b201cce8d73949f518fe95d 166 SUPERFAMILY SSF51261 14 165 2.96E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif CF65_01601 182accc93b201cce8d73949f518fe95d 166 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 82 94 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CF65_01601 182accc93b201cce8d73949f518fe95d 166 Gene3D G3DSA:2.70.70.10 7 166 1.6E-58 T 14-10-2018 IPR011055 Duplicated hybrid motif CF65_01265 cda45b4eb087ca56f3e74e41bc2c44d7 38 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 1 36 9.4E-11 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CF65_00868 5703b1362615618a53369e550ca8c8e5 80 Pfam PF04964 Flp/Fap pilin component 23 71 2.6E-12 T 14-10-2018 IPR007047 Flp/Fap pilin component CF65_00333 c7ff84dc5d0c6aa07ed0e2e3c8dbed5e 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CF65_00333 c7ff84dc5d0c6aa07ed0e2e3c8dbed5e 313 Gene3D G3DSA:3.40.1190.20 2 311 3.4E-88 T 14-10-2018 IPR029056 Ribokinase-like CF65_00333 c7ff84dc5d0c6aa07ed0e2e3c8dbed5e 313 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 309 2.1E-103 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CF65_00333 c7ff84dc5d0c6aa07ed0e2e3c8dbed5e 313 PIRSF PIRSF000535 1 311 6.8E-111 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CF65_00333 c7ff84dc5d0c6aa07ed0e2e3c8dbed5e 313 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 4 309 1.1E-105 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 CF65_00333 c7ff84dc5d0c6aa07ed0e2e3c8dbed5e 313 Pfam PF00294 pfkB family carbohydrate kinase 11 293 8.4E-62 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB CF65_00333 c7ff84dc5d0c6aa07ed0e2e3c8dbed5e 313 SUPERFAMILY SSF53613 6 294 4.21E-70 T 14-10-2018 IPR029056 Ribokinase-like CF65_01197 c6b97d1993629af7ecb25969bf11de0c 247 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 34 245 3.3E-64 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CF65_01197 c6b97d1993629af7ecb25969bf11de0c 247 SUPERFAMILY SSF53901 25 168 1.94E-6 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_00753 ae6ec020eab8a198758fc88e7c4067e0 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 325 1.2E-47 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CF65_00761 8a048eeab2e2e037a8baebe781a35f82 151 Gene3D G3DSA:3.30.9.10 14 50 1.2E-35 T 14-10-2018 CF65_00761 8a048eeab2e2e037a8baebe781a35f82 151 Gene3D G3DSA:3.50.50.60 51 142 1.2E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_01005 4b97cbceb114c3c769e785057403b7db 579 Gene3D G3DSA:3.40.720.10 253 495 1.4E-25 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CF65_01005 4b97cbceb114c3c769e785057403b7db 579 PIRSF PIRSF004950 7 579 6.9E-207 T 14-10-2018 IPR012159 Inner membrane protein YejM CF65_01005 4b97cbceb114c3c769e785057403b7db 579 Pfam PF11893 Domain of unknown function (DUF3413) 7 253 2.1E-100 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal CF65_01005 4b97cbceb114c3c769e785057403b7db 579 SUPERFAMILY SSF53649 259 558 7.61E-38 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CF65_01005 4b97cbceb114c3c769e785057403b7db 579 Pfam PF00884 Sulfatase 404 493 1.5E-12 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CF65_02623 842d511f5bdf7c2392ce1290d79761d7 200 Gene3D G3DSA:3.90.25.10 66 191 1.6E-65 T 14-10-2018 CF65_02623 842d511f5bdf7c2392ce1290d79761d7 200 Gene3D G3DSA:3.40.50.720 1 183 1.6E-65 T 14-10-2018 CF65_02623 842d511f5bdf7c2392ce1290d79761d7 200 Pfam PF16363 GDP-mannose 4,6 dehydratase 1 184 1.5E-40 T 14-10-2018 IPR016040 NAD(P)-binding domain CF65_02623 842d511f5bdf7c2392ce1290d79761d7 200 SUPERFAMILY SSF51735 1 194 6.68E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_00340 1a9d00474743ea92366b10d96652e685 183 Pfam PF02525 Flavodoxin-like fold 2 164 2.1E-22 T 14-10-2018 IPR003680 Flavodoxin-like fold CF65_00340 1a9d00474743ea92366b10d96652e685 183 SUPERFAMILY SSF52218 1 170 6.55E-27 T 14-10-2018 IPR029039 Flavoprotein-like superfamily CF65_00340 1a9d00474743ea92366b10d96652e685 183 Gene3D G3DSA:3.40.50.360 1 180 1.5E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily CF65_00686 954de4a85730ea3348b2c61e451e8b15 96 Pfam PF13591 MerR HTH family regulatory protein 10 89 4.0E-16 T 14-10-2018 CF65_00686 954de4a85730ea3348b2c61e451e8b15 96 Gene3D G3DSA:1.10.1660.10 2 95 3.8E-21 T 14-10-2018 CF65_02521 e1cee8464ae2b6962d7f5847a9b4cc2e 116 Pfam PF04247 Invasion gene expression up-regulator, SirB 4 116 2.2E-28 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB CF65_02521 e1cee8464ae2b6962d7f5847a9b4cc2e 116 PIRSF PIRSF005610 1 116 4.7E-36 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB CF65_00490 a69cafd5411b672d33f73a7a451abb0d 807 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 22 804 5.0E-192 T 14-10-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:1901515 CF65_00490 a69cafd5411b672d33f73a7a451abb0d 807 SUPERFAMILY SSF48452 47 156 3.5E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CF65_00490 a69cafd5411b672d33f73a7a451abb0d 807 SUPERFAMILY SSF48435 261 501 2.09E-5 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 CF65_00034 a4da49b6f5639f65ba22a8e331199d3f 297 SUPERFAMILY SSF52540 44 281 1.58E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00034 a4da49b6f5639f65ba22a8e331199d3f 297 Pfam PF05621 Bacterial TniB protein 23 276 3.5E-99 T 14-10-2018 IPR008868 Bacterial TniB CF65_00034 a4da49b6f5639f65ba22a8e331199d3f 297 Gene3D G3DSA:3.40.50.300 35 210 3.8E-17 T 14-10-2018 CF65_00801 a4927e89be00eab65f2f2f3b1a724112 322 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 16 317 3.5E-129 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CF65_00801 a4927e89be00eab65f2f2f3b1a724112 322 SUPERFAMILY SSF55681 11 317 2.19E-78 T 14-10-2018 CF65_00801 a4927e89be00eab65f2f2f3b1a724112 322 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 322 53.362 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CF65_00801 a4927e89be00eab65f2f2f3b1a724112 322 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 318 8.1E-44 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CF65_00801 a4927e89be00eab65f2f2f3b1a724112 322 PRINTS PR00982 Lysyl-tRNA synthetase signature 30 40 1.1E-6 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CF65_00801 a4927e89be00eab65f2f2f3b1a724112 322 PRINTS PR00982 Lysyl-tRNA synthetase signature 98 115 1.1E-6 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CF65_00801 a4927e89be00eab65f2f2f3b1a724112 322 Gene3D G3DSA:3.30.930.10 1 322 2.4E-110 T 14-10-2018 CF65_02959 7ce6c1ce02502aef7d99c204e5c81cfc 119 SUPERFAMILY SSF48179 9 117 3.57E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CF65_02959 7ce6c1ce02502aef7d99c204e5c81cfc 119 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 71 93 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CF65_02959 7ce6c1ce02502aef7d99c204e5c81cfc 119 Gene3D G3DSA:1.10.3730.10 7 119 3.8E-38 T 14-10-2018 CF65_02959 7ce6c1ce02502aef7d99c204e5c81cfc 119 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 10 115 1.1E-33 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CF65_02368 d9c765f2bae135152e1388bd9ac3eff8 221 Hamap MF_01405 dITP/XTP pyrophosphatase. 27 221 51.269 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 CF65_02368 d9c765f2bae135152e1388bd9ac3eff8 221 Gene3D G3DSA:3.90.950.10 7 221 6.1E-80 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CF65_02368 d9c765f2bae135152e1388bd9ac3eff8 221 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 28 219 1.0E-68 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 CF65_02368 d9c765f2bae135152e1388bd9ac3eff8 221 Pfam PF01725 Ham1 family 29 216 7.0E-56 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 CF65_02368 d9c765f2bae135152e1388bd9ac3eff8 221 SUPERFAMILY SSF52972 22 219 2.88E-72 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CF65_00163 b8eb221b027c418a891b545c43c54a84 229 Pfam PF01478 Type IV leader peptidase family 93 199 3.8E-20 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CF65_02205 1c10e9d9c3629b737121544b1cad3706 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 127 155 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CF65_02205 1c10e9d9c3629b737121544b1cad3706 245 SUPERFAMILY SSF51735 5 226 1.8E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_02205 1c10e9d9c3629b737121544b1cad3706 245 Pfam PF00106 short chain dehydrogenase 5 180 1.9E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02205 1c10e9d9c3629b737121544b1cad3706 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 128 3.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02205 1c10e9d9c3629b737121544b1cad3706 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 3.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02205 1c10e9d9c3629b737121544b1cad3706 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 66 77 3.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02205 1c10e9d9c3629b737121544b1cad3706 245 Gene3D G3DSA:3.40.50.720 3 228 9.6E-58 T 14-10-2018 CF65_02205 1c10e9d9c3629b737121544b1cad3706 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 215 7.8E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02205 1c10e9d9c3629b737121544b1cad3706 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 7.8E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02205 1c10e9d9c3629b737121544b1cad3706 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 7.8E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02205 1c10e9d9c3629b737121544b1cad3706 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 7.8E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02205 1c10e9d9c3629b737121544b1cad3706 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 7.8E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CF65_02288 f5bc77235c45a13886b5d77bb22e93c3 178 Pfam PF04315 Elongation factor P hydroxylase 11 173 1.4E-76 T 14-10-2018 IPR007411 Elongation factor P hydroxylase CF65_02157 af4f2925b760cbff11d9f0e0d255bf2b 325 Pfam PF07715 TonB-dependent Receptor Plug Domain 34 138 1.7E-22 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain CF65_02157 af4f2925b760cbff11d9f0e0d255bf2b 325 SUPERFAMILY SSF56935 16 315 1.28E-42 T 14-10-2018 CF65_02157 af4f2925b760cbff11d9f0e0d255bf2b 325 Gene3D G3DSA:2.40.170.20 32 322 5.0E-31 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CF65_02996 1e23d60fa2fec1fb8099ce2d8a9d8bfc 112 SUPERFAMILY SSF161111 10 111 5.1E-26 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CF65_02996 1e23d60fa2fec1fb8099ce2d8a9d8bfc 112 Pfam PF01545 Cation efflux family 16 107 1.2E-20 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CF65_02996 1e23d60fa2fec1fb8099ce2d8a9d8bfc 112 Gene3D G3DSA:1.20.1510.10 9 112 7.8E-29 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CF65_02996 1e23d60fa2fec1fb8099ce2d8a9d8bfc 112 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 110 6.9E-24 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CF65_02659 9e783df82b73a86dc58dd060a4857d88 247 Gene3D G3DSA:3.40.50.620 63 204 2.2E-6 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CF65_02659 9e783df82b73a86dc58dd060a4857d88 247 Pfam PF02698 DUF218 domain 79 242 3.0E-24 T 14-10-2018 IPR003848 Domain of unknown function DUF218 CF65_01195 27b590ed96f6a8cd7e925b2ab13c7597 87 SUPERFAMILY SSF47336 4 85 2.36E-11 T 14-10-2018 IPR036736 ACP-like superfamily CF65_01195 27b590ed96f6a8cd7e925b2ab13c7597 87 Gene3D G3DSA:1.10.1200.10 1 86 1.5E-18 T 14-10-2018 IPR036736 ACP-like superfamily CF65_01195 27b590ed96f6a8cd7e925b2ab13c7597 87 Pfam PF00550 Phosphopantetheine attachment site 7 80 4.8E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain CF65_02785 e68a959171c8ee388456caef4c124cbf 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 306 9.5E-49 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CF65_00458 7cdec1f10ef48ef11926a4c311b85bbb 477 SUPERFAMILY SSF53850 5 462 1.38E-104 T 14-10-2018 CF65_00458 7cdec1f10ef48ef11926a4c311b85bbb 477 Gene3D G3DSA:3.40.190.10 1 212 1.3E-134 T 14-10-2018 CF65_00458 7cdec1f10ef48ef11926a4c311b85bbb 477 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 14 384 1.1E-84 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain CF65_00458 7cdec1f10ef48ef11926a4c311b85bbb 477 Gene3D G3DSA:3.10.105.10 213 436 1.3E-134 T 14-10-2018 CF65_00458 7cdec1f10ef48ef11926a4c311b85bbb 477 PIRSF PIRSF002741 1 472 2.9E-86 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CF65_00458 7cdec1f10ef48ef11926a4c311b85bbb 477 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 1 466 7.6E-173 T 14-10-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 CF65_00458 7cdec1f10ef48ef11926a4c311b85bbb 477 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 19 41 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site CF65_02072 cb0f0e0cb7f6669df4c90813dc218a1f 141 Pfam PF02316 Mu DNA-binding domain 10 98 4.6E-14 T 14-10-2018 IPR003314 Mu-type HTH domain GO:0003677 CF65_02072 cb0f0e0cb7f6669df4c90813dc218a1f 141 Gene3D G3DSA:1.10.10.10 2 76 2.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_02072 cb0f0e0cb7f6669df4c90813dc218a1f 141 SUPERFAMILY SSF46955 3 66 6.68E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily CF65_02671 f3787b4525142820f9edbc988186d645 172 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 167 8.2E-66 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 CF65_02671 f3787b4525142820f9edbc988186d645 172 Gene3D G3DSA:3.40.50.300 1 169 2.8E-64 T 14-10-2018 CF65_02671 f3787b4525142820f9edbc988186d645 172 SUPERFAMILY SSF52540 3 168 2.35E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02671 f3787b4525142820f9edbc988186d645 172 Pfam PF01202 Shikimate kinase 14 167 8.2E-11 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CF65_00134 cdde5ff54aac1825900a5d0eb7dea9fa 311 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 15 308 21.412 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CF65_00134 cdde5ff54aac1825900a5d0eb7dea9fa 311 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 24 306 2.3E-126 T 14-10-2018 CF65_00134 cdde5ff54aac1825900a5d0eb7dea9fa 311 PIRSF PIRSF005355 8 310 5.9E-86 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 CF65_00134 cdde5ff54aac1825900a5d0eb7dea9fa 311 Pfam PF01040 UbiA prenyltransferase family 32 283 8.5E-38 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CF65_00145 6b7ba3af8033c56eecf2de86aaaf1be9 73 Pfam PF13333 Integrase core domain 17 72 1.1E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CF65_00145 6b7ba3af8033c56eecf2de86aaaf1be9 73 SUPERFAMILY SSF53098 5 72 8.72E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily CF65_00909 0a4b5c25ae39c31cd774d71b67d75f55 170 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 4 136 5.3E-47 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CF65_00909 0a4b5c25ae39c31cd774d71b67d75f55 170 Gene3D G3DSA:2.20.25.120 48 80 5.5E-58 T 14-10-2018 CF65_00909 0a4b5c25ae39c31cd774d71b67d75f55 170 Gene3D G3DSA:3.40.50.300 5 158 5.5E-58 T 14-10-2018 CF65_00909 0a4b5c25ae39c31cd774d71b67d75f55 170 SUPERFAMILY SSF52540 3 161 4.3E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_00909 0a4b5c25ae39c31cd774d71b67d75f55 170 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 5 160 2.9E-47 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CF65_00660 2ec0105121f268a2ff8daf1456525d43 75 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 49 1.6E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CF65_00660 2ec0105121f268a2ff8daf1456525d43 75 Gene3D G3DSA:2.10.260.10 2 71 8.2E-12 T 14-10-2018 CF65_00660 2ec0105121f268a2ff8daf1456525d43 75 SMART SM00966 8 53 4.5E-4 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CF65_00660 2ec0105121f268a2ff8daf1456525d43 75 SUPERFAMILY SSF89447 5 50 1.74E-11 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily CF65_00455 7244d252472c19a9b94aa2621964689d 258 Pfam PF04333 MlaA lipoprotein 43 234 2.6E-64 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CF65_00455 7244d252472c19a9b94aa2621964689d 258 PRINTS PR01805 VacJ lipoprotein signature 44 57 7.8E-33 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CF65_00455 7244d252472c19a9b94aa2621964689d 258 PRINTS PR01805 VacJ lipoprotein signature 151 168 7.8E-33 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CF65_00455 7244d252472c19a9b94aa2621964689d 258 PRINTS PR01805 VacJ lipoprotein signature 113 130 7.8E-33 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CF65_00455 7244d252472c19a9b94aa2621964689d 258 PRINTS PR01805 VacJ lipoprotein signature 62 78 7.8E-33 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CF65_01934 6f09c369996ca9eaf5758ae6e83bdf46 203 Gene3D G3DSA:3.40.50.1240 12 202 7.2E-8 T 14-10-2018 IPR029033 Histidine phosphatase superfamily CF65_01934 6f09c369996ca9eaf5758ae6e83bdf46 203 SUPERFAMILY SSF53254 16 186 4.07E-10 T 14-10-2018 IPR029033 Histidine phosphatase superfamily CF65_00990 5b4d94e140c341a86aea77b525b76ece 209 Pfam PF03473 MOSC domain 40 151 5.8E-18 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CF65_00990 5b4d94e140c341a86aea77b525b76ece 209 Gene3D G3DSA:2.40.33.20 2 209 3.4E-52 T 14-10-2018 CF65_00990 5b4d94e140c341a86aea77b525b76ece 209 SUPERFAMILY SSF50800 9 203 9.94E-52 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily CF65_00691 5bdcf7aedbdf82ba00ab63eb53ef2e2b 346 Pfam PF07690 Major Facilitator Superfamily 1 296 9.4E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CF65_00691 5bdcf7aedbdf82ba00ab63eb53ef2e2b 346 SUPERFAMILY SSF103473 2 332 2.09E-43 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_00691 5bdcf7aedbdf82ba00ab63eb53ef2e2b 346 Gene3D G3DSA:1.20.1250.20 1 332 4.7E-36 T 14-10-2018 CF65_01661 3b903d4a6bb81d5f18d162d3a3843a10 243 Pfam PF00899 ThiF family 11 237 1.6E-58 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CF65_01661 3b903d4a6bb81d5f18d162d3a3843a10 243 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 7 238 2.4E-124 T 14-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 CF65_01661 3b903d4a6bb81d5f18d162d3a3843a10 243 SUPERFAMILY SSF69572 3 239 7.19E-80 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CF65_01661 3b903d4a6bb81d5f18d162d3a3843a10 243 Gene3D G3DSA:3.40.50.720 3 242 3.2E-80 T 14-10-2018 CF65_01533 635feef4d41a97edf2ef4851bb8ba89a 147 Pfam PF13274 Protein of unknown function (DUF4065) 29 128 2.0E-22 T 14-10-2018 IPR025272 Domain of unknown function DUF4065 CF65_02708 d5a95911b5653636698993ff43059b54 212 Pfam PF00753 Metallo-beta-lactamase superfamily 9 193 2.8E-31 T 14-10-2018 IPR001279 Metallo-beta-lactamase CF65_02708 d5a95911b5653636698993ff43059b54 212 Gene3D G3DSA:3.60.15.10 1 211 1.1E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CF65_02708 d5a95911b5653636698993ff43059b54 212 SUPERFAMILY SSF56281 1 210 2.84E-57 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CF65_02708 d5a95911b5653636698993ff43059b54 212 SMART SM00849 12 193 1.0E-43 T 14-10-2018 IPR001279 Metallo-beta-lactamase CF65_02347 4adcfce0383f377e9dd64eac327f31dd 912 SUPERFAMILY SSF103515 631 912 3.14E-14 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily CF65_02347 4adcfce0383f377e9dd64eac327f31dd 912 Gene3D G3DSA:2.40.128.130 625 912 7.2E-16 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily CF65_00272 3a9cfeb47bfff78b2b4b495ce290aa60 316 SUPERFAMILY SSF53901 3 316 3.22E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_00272 3a9cfeb47bfff78b2b4b495ce290aa60 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 181 1.1E-29 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CF65_00272 3a9cfeb47bfff78b2b4b495ce290aa60 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 67.782 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CF65_00272 3a9cfeb47bfff78b2b4b495ce290aa60 316 Gene3D G3DSA:3.40.47.10 171 316 6.5E-50 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_00272 3a9cfeb47bfff78b2b4b495ce290aa60 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 2 316 5.6E-146 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CF65_00272 3a9cfeb47bfff78b2b4b495ce290aa60 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.1E-35 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CF65_00272 3a9cfeb47bfff78b2b4b495ce290aa60 316 Gene3D G3DSA:3.40.47.10 1 170 5.0E-72 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 CF65_02099 b1ea5b951e616764c02cbd9b78f654e0 95 Pfam PF01386 Ribosomal L25p family 6 92 4.3E-25 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CF65_02099 b1ea5b951e616764c02cbd9b78f654e0 95 SUPERFAMILY SSF50715 3 95 5.41E-31 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CF65_02099 b1ea5b951e616764c02cbd9b78f654e0 95 Gene3D G3DSA:2.40.240.10 1 95 2.3E-33 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CF65_02099 b1ea5b951e616764c02cbd9b78f654e0 95 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 95 2.0E-44 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CF65_02099 b1ea5b951e616764c02cbd9b78f654e0 95 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 95 27.855 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CF65_02998 fc2a89b695b23c7268392c9f4ebe00f9 188 ProDom PD487572 PRECURSOR PM0067 HI0983 SIGNAL 20 186 4.0E-51 T 14-10-2018 CF65_00038 46676845124a91a1e2ef0f7fbde1b03a 124 Gene3D G3DSA:3.50.50.60 4 120 5.6E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_00038 46676845124a91a1e2ef0f7fbde1b03a 124 Pfam PF03486 HI0933-like protein 8 108 5.6E-39 T 14-10-2018 CF65_00038 46676845124a91a1e2ef0f7fbde1b03a 124 SUPERFAMILY SSF51905 7 116 2.2E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CF65_00438 0529175f8fb89c66e413ba2fc969f316 282 Pfam PF07506 RepB plasmid partitioning protein 91 249 1.3E-14 T 14-10-2018 IPR011111 RepB plasmid partition CF65_00438 0529175f8fb89c66e413ba2fc969f316 282 SUPERFAMILY SSF109709 83 192 2.09E-17 T 14-10-2018 CF65_00438 0529175f8fb89c66e413ba2fc969f316 282 SUPERFAMILY SSF110849 2 93 1.73E-19 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily CF65_00438 0529175f8fb89c66e413ba2fc969f316 282 Pfam PF02195 ParB-like nuclease domain 6 90 5.5E-14 T 14-10-2018 IPR003115 ParB/Sulfiredoxin CF65_00438 0529175f8fb89c66e413ba2fc969f316 282 Gene3D G3DSA:3.90.1530.30 16 76 1.5E-9 T 14-10-2018 CF65_00438 0529175f8fb89c66e413ba2fc969f316 282 SMART SM00470 4 90 3.8E-15 T 14-10-2018 IPR003115 ParB/Sulfiredoxin CF65_00438 0529175f8fb89c66e413ba2fc969f316 282 Gene3D G3DSA:1.10.10.2830 77 190 1.1E-11 T 14-10-2018 CF65_02632 38125d751cdf772f66d5f3417510b4f9 255 Gene3D G3DSA:3.90.550.10 2 160 1.0E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02632 38125d751cdf772f66d5f3417510b4f9 255 SUPERFAMILY SSF53448 3 234 8.04E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_02632 38125d751cdf772f66d5f3417510b4f9 255 Pfam PF13641 Glycosyltransferase like family 2 11 154 2.5E-14 T 14-10-2018 CF65_00180 bb6bb565b8bc2078a561c270d80a8b1f 74 Pfam PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B 5 66 7.0E-17 T 14-10-2018 IPR001677 Transferrin-binding protein, C-lobe/N-lobe beta barrel domain CF65_00180 bb6bb565b8bc2078a561c270d80a8b1f 74 Gene3D G3DSA:2.40.160.90 1 74 2.3E-19 T 14-10-2018 CF65_00180 bb6bb565b8bc2078a561c270d80a8b1f 74 SUPERFAMILY SSF56925 6 66 7.53E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CF65_01455 a3ddf7838381878ffc03ff415d07f073 332 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 3.5E-162 T 14-10-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 CF65_01455 a3ddf7838381878ffc03ff415d07f073 332 Pfam PF13407 Periplasmic binding protein domain 40 285 3.2E-62 T 14-10-2018 IPR025997 Periplasmic binding protein CF65_01455 a3ddf7838381878ffc03ff415d07f073 332 Gene3D G3DSA:3.40.50.2300 29 305 5.7E-123 T 14-10-2018 CF65_01455 a3ddf7838381878ffc03ff415d07f073 332 SUPERFAMILY SSF53822 24 317 1.16E-72 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_01455 a3ddf7838381878ffc03ff415d07f073 332 Gene3D G3DSA:3.40.50.2300 129 317 5.7E-123 T 14-10-2018 CF65_02109 55467bea69fd141c73a4b62f9affabea 97 SUPERFAMILY SSF56801 2 91 3.66E-12 T 14-10-2018 CF65_02109 55467bea69fd141c73a4b62f9affabea 97 Pfam PF13193 AMP-binding enzyme C-terminal domain 23 79 1.1E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CF65_02109 55467bea69fd141c73a4b62f9affabea 97 Gene3D G3DSA:3.30.300.30 1 92 1.6E-10 T 14-10-2018 CF65_01123 1da35ef6754e0e9ada0494ac804d81d4 420 SMART SM01091 343 419 3.0E-23 T 14-10-2018 IPR005170 Transporter-associated domain CF65_01123 1da35ef6754e0e9ada0494ac804d81d4 420 Pfam PF00571 CBS domain 279 327 4.4E-5 T 14-10-2018 IPR000644 CBS domain CF65_01123 1da35ef6754e0e9ada0494ac804d81d4 420 SUPERFAMILY SSF54631 192 330 4.76E-23 T 14-10-2018 CF65_01123 1da35ef6754e0e9ada0494ac804d81d4 420 Pfam PF01595 Domain of unknown function DUF21 11 183 1.1E-48 T 14-10-2018 IPR002550 CNNM, transmembrane domain CF65_01123 1da35ef6754e0e9ada0494ac804d81d4 420 Gene3D G3DSA:3.30.465.10 340 420 6.3E-31 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CF65_01123 1da35ef6754e0e9ada0494ac804d81d4 420 Pfam PF03471 Transporter associated domain 344 419 3.8E-19 T 14-10-2018 IPR005170 Transporter-associated domain CF65_01123 1da35ef6754e0e9ada0494ac804d81d4 420 SUPERFAMILY SSF56176 341 419 3.27E-21 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CF65_01123 1da35ef6754e0e9ada0494ac804d81d4 420 Gene3D G3DSA:3.10.580.10 201 331 9.2E-41 T 14-10-2018 CF65_00961 a059679e26252c7b42e0bb3bd7437c36 1292 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 948 1292 4.1E-70 T 14-10-2018 IPR007452 Translocation and assembly module TamB CF65_01825 f9d041eb1b61ab34d0ef8d7fbdac394f 313 Pfam PF01032 FecCD transport family 24 310 1.4E-48 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CF65_01825 f9d041eb1b61ab34d0ef8d7fbdac394f 313 Gene3D G3DSA:1.10.3470.10 6 313 3.1E-50 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_01825 f9d041eb1b61ab34d0ef8d7fbdac394f 313 SUPERFAMILY SSF81345 9 311 1.44E-51 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_02870 f82c0bb7eba403bfcecc72f3dab38d82 450 Pfam PF03553 Na+/H+ antiporter family 152 444 3.2E-70 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CF65_02870 f82c0bb7eba403bfcecc72f3dab38d82 450 Pfam PF13726 Na+-H+ antiporter family 4 90 1.2E-32 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal CF65_02126 b72c3dac3630a982edde457d919d0a9b 278 Pfam PF10670 Domain of unknown function (DUF4198) 17 240 6.6E-44 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 CF65_02946 28b6dcbfa52bd580c81d8e02f3dbfafa 525 PRINTS PR01806 Virulence factor MviN signature 54 70 1.2E-75 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CF65_02946 28b6dcbfa52bd580c81d8e02f3dbfafa 525 PRINTS PR01806 Virulence factor MviN signature 142 166 1.2E-75 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CF65_02946 28b6dcbfa52bd580c81d8e02f3dbfafa 525 PRINTS PR01806 Virulence factor MviN signature 268 294 1.2E-75 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CF65_02946 28b6dcbfa52bd580c81d8e02f3dbfafa 525 PRINTS PR01806 Virulence factor MviN signature 371 390 1.2E-75 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CF65_02946 28b6dcbfa52bd580c81d8e02f3dbfafa 525 PRINTS PR01806 Virulence factor MviN signature 422 439 1.2E-75 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CF65_02946 28b6dcbfa52bd580c81d8e02f3dbfafa 525 PRINTS PR01806 Virulence factor MviN signature 35 54 1.2E-75 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CF65_02946 28b6dcbfa52bd580c81d8e02f3dbfafa 525 PRINTS PR01806 Virulence factor MviN signature 166 187 1.2E-75 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CF65_02946 28b6dcbfa52bd580c81d8e02f3dbfafa 525 PIRSF PIRSF002869 2 524 1.2E-144 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CF65_02946 28b6dcbfa52bd580c81d8e02f3dbfafa 525 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 480 19.392 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CF65_02946 28b6dcbfa52bd580c81d8e02f3dbfafa 525 Pfam PF03023 MviN-like protein 30 491 1.7E-156 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CF65_02946 28b6dcbfa52bd580c81d8e02f3dbfafa 525 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 516 3.2E-128 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CF65_01147 66fb230ace455f2dd84fdaa73131ff01 96 SUPERFAMILY SSF81301 3 94 2.33E-16 T 14-10-2018 CF65_01147 66fb230ace455f2dd84fdaa73131ff01 96 Gene3D G3DSA:3.30.460.10 2 95 8.7E-22 T 14-10-2018 CF65_01147 66fb230ace455f2dd84fdaa73131ff01 96 Pfam PF01909 Nucleotidyltransferase domain 27 83 2.2E-6 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CF65_02320 3c8ac72a08088529a8442091b3493ff4 241 Gene3D G3DSA:3.40.50.300 3 241 6.0E-72 T 14-10-2018 CF65_02320 3c8ac72a08088529a8442091b3493ff4 241 SMART SM00382 28 202 1.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain CF65_02320 3c8ac72a08088529a8442091b3493ff4 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 6.4E-122 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CF65_02320 3c8ac72a08088529a8442091b3493ff4 241 Pfam PF00005 ABC transporter 20 166 1.3E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CF65_02320 3c8ac72a08088529a8442091b3493ff4 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CF65_02320 3c8ac72a08088529a8442091b3493ff4 241 SUPERFAMILY SSF52540 3 235 2.25E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02320 3c8ac72a08088529a8442091b3493ff4 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 1.3E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CF65_02788 7c75086865cf980437a2ecd3c85c0653 312 Gene3D G3DSA:3.40.50.2300 37 292 4.7E-69 T 14-10-2018 CF65_02788 7c75086865cf980437a2ecd3c85c0653 312 Pfam PF13407 Periplasmic binding protein domain 31 286 1.7E-49 T 14-10-2018 IPR025997 Periplasmic binding protein CF65_02788 7c75086865cf980437a2ecd3c85c0653 312 SUPERFAMILY SSF53822 10 311 1.88E-71 T 14-10-2018 IPR028082 Periplasmic binding protein-like I CF65_02788 7c75086865cf980437a2ecd3c85c0653 312 Gene3D G3DSA:3.40.50.2300 129 300 4.7E-69 T 14-10-2018 CF65_01201 785a7819d723467341cff01fc364cb72 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 118 199 3.2E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CF65_01201 785a7819d723467341cff01fc364cb72 237 Gene3D G3DSA:3.40.50.1000 12 213 4.0E-52 T 14-10-2018 IPR023214 HAD superfamily CF65_01201 785a7819d723467341cff01fc364cb72 237 SUPERFAMILY SSF56784 10 234 3.92E-36 T 14-10-2018 IPR036412 HAD-like superfamily CF65_01201 785a7819d723467341cff01fc364cb72 237 Gene3D G3DSA:1.20.120.1600 24 109 4.0E-52 T 14-10-2018 CF65_01201 785a7819d723467341cff01fc364cb72 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 204 6.6E-14 T 14-10-2018 CF65_00743 70da49cc725c5adbd122da806a13b703 499 Pfam PF02600 Disulfide bond formation protein DsbB 10 91 2.1E-5 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CF65_00743 70da49cc725c5adbd122da806a13b703 499 SUPERFAMILY SSF158442 13 125 1.57E-12 T 14-10-2018 IPR023380 DsbB-like superfamily CF65_00743 70da49cc725c5adbd122da806a13b703 499 Gene3D G3DSA:1.20.1550.10 7 96 3.9E-5 T 14-10-2018 IPR023380 DsbB-like superfamily CF65_00743 70da49cc725c5adbd122da806a13b703 499 SUPERFAMILY SSF63825 250 482 1.23E-7 T 14-10-2018 CF65_01991 38a2cf6c037936488d19e8af56fd70e7 184 Pfam PF00881 Nitroreductase family 8 162 4.7E-17 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CF65_01991 38a2cf6c037936488d19e8af56fd70e7 184 Gene3D G3DSA:3.40.109.10 1 184 1.5E-35 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CF65_01991 38a2cf6c037936488d19e8af56fd70e7 184 PIRSF PIRSF000232 1 184 1.7E-53 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CF65_01991 38a2cf6c037936488d19e8af56fd70e7 184 SUPERFAMILY SSF55469 1 183 8.77E-33 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CF65_02594 4368c06d6d38f7a1f074d8ff1f09476e 140 Pfam PF04224 Protein of unknown function, DUF417 7 136 4.7E-22 T 14-10-2018 IPR007339 Inner membrane protein RclC-like CF65_01124 262331dca8955d72fc992bebaa9898de 156 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 6 143 4.9E-65 T 14-10-2018 IPR014172 TonB-system energizer ExbB type-2 GO:0016020|GO:0055085 CF65_01124 262331dca8955d72fc992bebaa9898de 156 Pfam PF01618 MotA/TolQ/ExbB proton channel family 49 139 1.2E-26 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CF65_02387 69a40383e64be3b3375ef0776c2f3b41 433 PIRSF PIRSF006066 4 433 1.6E-162 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 CF65_02387 69a40383e64be3b3375ef0776c2f3b41 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 421 4.7E-117 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CF65_02387 69a40383e64be3b3375ef0776c2f3b41 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 9.9E-139 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 CF65_01264 b55bd0cdf7db1e0e2afac97837e71055 38 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 1 33 6.8E-8 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CF65_02536 df60d4ef800757f00864554f8283e964 110 PIRSF PIRSF003203 1 108 5.9E-43 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD CF65_02536 df60d4ef800757f00864554f8283e964 110 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 103 4.1E-23 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD CF65_00616 c97e4cb362b3369909016da99a638643 309 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 265 291 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CF65_00616 c97e4cb362b3369909016da99a638643 309 Pfam PF01148 Cytidylyltransferase family 42 306 1.9E-67 T 14-10-2018 CF65_02888 9cda4896a313586a7f46bb62651c8cc1 118 Hamap MF_00023 SsrA-binding protein [smpB]. 1 118 52.19 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 CF65_02888 9cda4896a313586a7f46bb62651c8cc1 118 Gene3D G3DSA:2.40.280.10 1 92 1.0E-26 T 14-10-2018 IPR023620 Small protein B CF65_02888 9cda4896a313586a7f46bb62651c8cc1 118 TIGRFAM TIGR00086 smpB: SsrA-binding protein 1 113 9.3E-36 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 CF65_02888 9cda4896a313586a7f46bb62651c8cc1 118 SUPERFAMILY SSF74982 2 95 1.31E-29 T 14-10-2018 IPR023620 Small protein B CF65_02888 9cda4896a313586a7f46bb62651c8cc1 118 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 1 95 7.0E-45 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 CF65_02888 9cda4896a313586a7f46bb62651c8cc1 118 Pfam PF01668 SmpB protein 1 114 3.6E-37 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 CF65_00615 9dd748d30f25729b23032f0b4f893c76 478 Pfam PF03600 Citrate transporter 28 208 5.7E-32 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CF65_00615 9dd748d30f25729b23032f0b4f893c76 478 SUPERFAMILY SSF116726 332 404 2.35E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CF65_00615 9dd748d30f25729b23032f0b4f893c76 478 Gene3D G3DSA:3.30.70.1450 239 315 5.8E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CF65_00615 9dd748d30f25729b23032f0b4f893c76 478 SUPERFAMILY SSF116726 232 299 6.28E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CF65_00615 9dd748d30f25729b23032f0b4f893c76 478 Pfam PF02080 TrkA-C domain 336 403 1.3E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CF65_00615 9dd748d30f25729b23032f0b4f893c76 478 Pfam PF02080 TrkA-C domain 242 306 3.4E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CF65_00615 9dd748d30f25729b23032f0b4f893c76 478 Gene3D G3DSA:3.30.70.1450 335 407 5.2E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CF65_02144 204b6e724fc277e5a586fd0cbc93c108 339 SUPERFAMILY SSF81345 8 334 7.98E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_02144 204b6e724fc277e5a586fd0cbc93c108 339 Pfam PF01032 FecCD transport family 25 334 8.2E-87 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CF65_02144 204b6e724fc277e5a586fd0cbc93c108 339 Gene3D G3DSA:1.10.3470.10 12 339 3.2E-99 T 14-10-2018 IPR037294 ABC transporter, BtuC-like CF65_01629 eff54a00904d9344ea00015b181df1bc 163 Pfam PF04608 Phosphatidylglycerophosphatase A 18 158 1.1E-47 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CF65_01629 eff54a00904d9344ea00015b181df1bc 163 PIRSF PIRSF006162 8 163 3.8E-46 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CF65_01629 eff54a00904d9344ea00015b181df1bc 163 SUPERFAMILY SSF101307 12 160 2.09E-43 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 CF65_02334 8827f3ecb50fa7b9d75655fd77140b38 476 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 476 1.9E-132 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CF65_02334 8827f3ecb50fa7b9d75655fd77140b38 476 SUPERFAMILY SSF56935 25 476 3.66E-96 T 14-10-2018 CF65_02334 8827f3ecb50fa7b9d75655fd77140b38 476 Gene3D G3DSA:2.40.160.60 25 476 1.0E-119 T 14-10-2018 CF65_01463 536a143e4cc325e91dda0847c56d092b 463 Pfam PF07690 Major Facilitator Superfamily 15 404 5.1E-47 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CF65_01463 536a143e4cc325e91dda0847c56d092b 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 353 373 1.1E-5 T 14-10-2018 CF65_01463 536a143e4cc325e91dda0847c56d092b 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 1.1E-5 T 14-10-2018 CF65_01463 536a143e4cc325e91dda0847c56d092b 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 1.1E-5 T 14-10-2018 CF65_01463 536a143e4cc325e91dda0847c56d092b 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 1.1E-5 T 14-10-2018 CF65_01463 536a143e4cc325e91dda0847c56d092b 463 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 436 1.5E-70 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CF65_01463 536a143e4cc325e91dda0847c56d092b 463 SUPERFAMILY SSF103473 7 449 1.83E-57 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_01463 536a143e4cc325e91dda0847c56d092b 463 Gene3D G3DSA:1.20.1250.20 262 457 1.7E-16 T 14-10-2018 CF65_01463 536a143e4cc325e91dda0847c56d092b 463 Gene3D G3DSA:1.20.1250.20 9 191 6.4E-34 T 14-10-2018 CF65_01875 e4beb11eab9d7b552b84410021161ba9 288 Pfam PF02378 Phosphotransferase system, EIIC 9 220 1.4E-51 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CF65_02462 55e4e64681114aea8ea53d3d592d63ed 166 Hamap MF_00269 Thiol peroxidase [tpx]. 3 166 37.282 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 CF65_02462 55e4e64681114aea8ea53d3d592d63ed 166 SUPERFAMILY SSF52833 1 163 4.94E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily CF65_02462 55e4e64681114aea8ea53d3d592d63ed 166 Gene3D G3DSA:3.40.30.10 1 166 5.8E-44 T 14-10-2018 CF65_02462 55e4e64681114aea8ea53d3d592d63ed 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 CF65_02462 55e4e64681114aea8ea53d3d592d63ed 166 Pfam PF08534 Redoxin 24 162 6.7E-23 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CF65_02252 53fab7968049825c2e00487650d24ff1 259 SUPERFAMILY SSF142906 8 128 9.55E-33 T 14-10-2018 IPR038056 YjbR-like superfamily CF65_02252 53fab7968049825c2e00487650d24ff1 259 Pfam PF04237 YjbR 16 119 7.5E-16 T 14-10-2018 IPR007351 Uncharacterised protein YjbR CF65_02252 53fab7968049825c2e00487650d24ff1 259 Gene3D G3DSA:3.90.1150.30 6 129 2.8E-45 T 14-10-2018 IPR038056 YjbR-like superfamily CF65_02481 662382ba02acb20eabf4bbf47bfc21ff 313 Pfam PF03824 High-affinity nickel-transport protein 28 301 3.3E-52 T 14-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CF65_02824 6a0c4eefee4e28f36dde91d4d51ed112 63 Pfam PF17344 Family of unknown function (DUF5374) 24 63 2.6E-21 T 14-10-2018 IPR020511 Uncharacterised protein family HI0941 CF65_02824 6a0c4eefee4e28f36dde91d4d51ed112 63 ProDom PD068240 PRECURSOR SIGNAL HI0941 PM0962 2 63 5.0E-18 T 14-10-2018 IPR020511 Uncharacterised protein family HI0941 CF65_01572 8ad7c47b312cbb5c56144a70ce0b4dbe 321 SUPERFAMILY SSF161098 70 298 1.57E-16 T 14-10-2018 IPR035906 MetI-like superfamily CF65_01572 8ad7c47b312cbb5c56144a70ce0b4dbe 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 312 1.2E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CF65_00447 3ca7c1b6f2aac2f282b3ea987735d6ac 220 Pfam PF08722 TnsA endonuclease N terminal 50 128 5.3E-11 T 14-10-2018 IPR014833 TnsA endonuclease, N-terminal CF65_00447 3ca7c1b6f2aac2f282b3ea987735d6ac 220 Pfam PF08721 TnsA endonuclease C terminal 131 204 6.3E-14 T 14-10-2018 IPR014832 TnsA endonuclease C-terminal CF65_00867 d6e4cbea80a63925fa34bf26cf1cef9b 90 Pfam PF04964 Flp/Fap pilin component 34 81 2.2E-17 T 14-10-2018 IPR007047 Flp/Fap pilin component CF65_00419 29ed662d4c4af1022fc7569367b3e8a4 165 Gene3D G3DSA:3.90.280.10 1 165 5.5E-44 T 14-10-2018 IPR036610 PEBP-like superfamily CF65_00419 29ed662d4c4af1022fc7569367b3e8a4 165 SUPERFAMILY SSF49777 5 164 1.57E-33 T 14-10-2018 IPR036610 PEBP-like superfamily CF65_00419 29ed662d4c4af1022fc7569367b3e8a4 165 Pfam PF01161 Phosphatidylethanolamine-binding protein 28 163 9.7E-29 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein CF65_00419 29ed662d4c4af1022fc7569367b3e8a4 165 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 26 161 1.9E-33 T 14-10-2018 IPR005247 YbhB/YbcL CF65_01939 53c09eeb6eb7ecce51e3aa746c22bfff 474 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 472 2.7E-200 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CF65_01939 53c09eeb6eb7ecce51e3aa746c22bfff 474 SUPERFAMILY SSF52467 301 474 5.89E-78 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CF65_01939 53c09eeb6eb7ecce51e3aa746c22bfff 474 PIRSF PIRSF000204 1 474 7.8E-235 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CF65_01939 53c09eeb6eb7ecce51e3aa746c22bfff 474 Gene3D G3DSA:3.40.50.1220 297 474 1.8E-87 T 14-10-2018 CF65_02028 abc2928cf294864fb2e5e7010a25e9e4 291 SUPERFAMILY SSF56112 20 277 1.1E-31 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily CF65_02028 abc2928cf294864fb2e5e7010a25e9e4 291 PIRSF PIRSF006221 1 289 4.8E-97 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CF65_02028 abc2928cf294864fb2e5e7010a25e9e4 291 Gene3D G3DSA:3.30.200.20 1 93 7.4E-24 T 14-10-2018 CF65_02028 abc2928cf294864fb2e5e7010a25e9e4 291 Pfam PF03881 Fructosamine kinase 1 286 7.9E-115 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CF65_02028 abc2928cf294864fb2e5e7010a25e9e4 291 Gene3D G3DSA:3.90.1200.10 95 290 6.9E-59 T 14-10-2018 CF65_02838 0a6862d948f9d79c867a036b7ae448a3 92 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 2 89 1.5E-26 T 14-10-2018 IPR011846 Cyd operon protein YbgE CF65_02838 0a6862d948f9d79c867a036b7ae448a3 92 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 15 89 1.2E-20 T 14-10-2018 IPR011846 Cyd operon protein YbgE CF65_02683 9a2536736b155e94e200bce4125eeb37 199 Pfam PF00037 4Fe-4S binding domain 76 98 5.5E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02683 9a2536736b155e94e200bce4125eeb37 199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CF65_02683 9a2536736b155e94e200bce4125eeb37 199 Pfam PF12798 4Fe-4S binding domain 150 169 0.11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CF65_02683 9a2536736b155e94e200bce4125eeb37 199 SUPERFAMILY SSF54862 2 189 2.09E-37 T 14-10-2018 CF65_00327 c9687f2ed0c6c23bc298b1cf8f05bd34 88 Gene3D G3DSA:1.10.1580.20 1 88 3.7E-44 T 14-10-2018 IPR038134 YihD-like superfamily CF65_00327 c9687f2ed0c6c23bc298b1cf8f05bd34 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 3.0E-39 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 CF65_00327 c9687f2ed0c6c23bc298b1cf8f05bd34 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.4E-43 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 CF65_02333 43cf91a10d6c2e1e9ed0e7eb080cb228 96 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 4 96 2.7E-36 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 CF65_02333 43cf91a10d6c2e1e9ed0e7eb080cb228 96 Pfam PF04175 Protein of unknown function (DUF406) 5 96 7.6E-37 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 CF65_02333 43cf91a10d6c2e1e9ed0e7eb080cb228 96 Gene3D G3DSA:3.30.70.860 25 96 5.7E-26 T 14-10-2018 IPR035571 UPF0234-like, C-terminal CF65_01728 4098d59ed682f910578c3683d2a239ca 83 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 1 59 1.8E-19 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 CF65_01728 4098d59ed682f910578c3683d2a239ca 83 Pfam PF13657 HipA N-terminal domain 1 59 2.8E-13 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 CF65_02279 beee9d3f98c9e2b3a533d2d540b2f6f7 264 PIRSF PIRSF029037 5 264 6.4E-103 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 CF65_02279 beee9d3f98c9e2b3a533d2d540b2f6f7 264 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 5 263 5.3E-107 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 CF65_00176 91d715456c789310a94b3db58d3ecffd 478 Pfam PF00474 Sodium:solute symporter family 37 433 3.1E-135 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CF65_00176 91d715456c789310a94b3db58d3ecffd 478 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 471 3.0E-225 T 14-10-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 CF65_00176 91d715456c789310a94b3db58d3ecffd 478 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 37 433 6.6E-110 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CF65_00176 91d715456c789310a94b3db58d3ecffd 478 Gene3D G3DSA:1.20.1730.10 6 475 1.2E-78 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily CF65_00176 91d715456c789310a94b3db58d3ecffd 478 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 415 435 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site CF65_00176 91d715456c789310a94b3db58d3ecffd 478 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 156 181 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site CF65_01494 647517a026fd0d583f6917a8008ab7de 120 Gene3D G3DSA:1.10.10.10 1 120 4.8E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CF65_01494 647517a026fd0d583f6917a8008ab7de 120 Pfam PF01638 HxlR-like helix-turn-helix 24 109 2.0E-27 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type CF65_01494 647517a026fd0d583f6917a8008ab7de 120 SUPERFAMILY SSF46785 8 114 1.34E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CF65_00443 cc52ae7a7110fc7bb21c6cf25f2cc9c0 372 Pfam PF06527 TniQ 19 160 6.3E-17 T 14-10-2018 IPR009492 TniQ CF65_02969 e828c8784252baa6a1e06543d596ea38 77 SUPERFAMILY SSF53383 24 77 1.26E-12 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CF65_02969 e828c8784252baa6a1e06543d596ea38 77 Gene3D G3DSA:3.90.1150.10 22 77 3.6E-24 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CF65_02807 fd54b768fc814b8bb558fa4352a37392 168 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 11 27 6.9E-41 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 CF65_02807 fd54b768fc814b8bb558fa4352a37392 168 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 53 71 6.9E-41 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 CF65_02807 fd54b768fc814b8bb558fa4352a37392 168 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 129 150 6.9E-41 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 CF65_02807 fd54b768fc814b8bb558fa4352a37392 168 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 75 97 6.9E-41 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 CF65_02807 fd54b768fc814b8bb558fa4352a37392 168 Pfam PF02794 RTX toxin acyltransferase family 9 131 2.0E-42 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 CF65_00450 9a424186c58d91f5d4b889f062c678be 419 SUPERFAMILY SSF51261 199 418 1.01E-49 T 14-10-2018 IPR011055 Duplicated hybrid motif CF65_00450 9a424186c58d91f5d4b889f062c678be 419 Pfam PF01551 Peptidase family M23 321 414 2.4E-27 T 14-10-2018 IPR016047 Peptidase M23 CF65_00450 9a424186c58d91f5d4b889f062c678be 419 Gene3D G3DSA:2.70.70.10 280 419 6.7E-37 T 14-10-2018 IPR011055 Duplicated hybrid motif CF65_00874 c624c924702c4c91da414913b9180190 426 Gene3D G3DSA:3.40.50.300 170 418 6.1E-72 T 14-10-2018 CF65_00874 c624c924702c4c91da414913b9180190 426 Gene3D G3DSA:3.30.450.380 2 167 3.4E-37 T 14-10-2018 CF65_00874 c624c924702c4c91da414913b9180190 426 Pfam PF00437 Type II/IV secretion system protein 73 348 1.3E-78 T 14-10-2018 IPR001482 Type II/IV secretion system protein CF65_00874 c624c924702c4c91da414913b9180190 426 SUPERFAMILY SSF52540 57 379 2.84E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_02325 b4d25ade4b057f697f67bb407341ba10 261 Pfam PF02405 Permease MlaE 45 256 4.6E-74 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 CF65_02325 b4d25ade4b057f697f67bb407341ba10 261 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 3.8E-104 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CF65_00422 4fe03ee49abb235309eb37613cd03f4e 291 Pfam PF04393 Protein of unknown function (DUF535) 21 286 1.0E-85 T 14-10-2018 IPR007488 Protein of unknown function DUF535 CF65_00052 da60daeb2a8e9fcc3605cec4e17160e1 183 Gene3D G3DSA:1.10.8.640 46 131 1.3E-35 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CF65_00052 da60daeb2a8e9fcc3605cec4e17160e1 183 Pfam PF03918 Cytochrome C biogenesis protein 35 178 2.5E-52 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CF65_01267 7d98247333db92ad1518d9f4c055b816 88 SUPERFAMILY SSF48295 2 54 9.94E-11 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CF65_01267 7d98247333db92ad1518d9f4c055b816 88 Pfam PF13518 Helix-turn-helix domain 7 51 8.4E-7 T 14-10-2018 CF65_02768 331d8f725f5f805b9de71dfe374368a7 62 SUPERFAMILY SSF51182 4 48 6.17E-9 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily CF65_02768 331d8f725f5f805b9de71dfe374368a7 62 Gene3D G3DSA:2.60.120.10 1 50 3.0E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold CF65_02554 7a0f93224bf7b4a4621968e1e0058814 224 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 222 27.075 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 CF65_02554 7a0f93224bf7b4a4621968e1e0058814 224 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 219 1.1E-54 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 CF65_01630 8cf223ecc6c13540a259cce018cd1ad2 207 Pfam PF01810 LysE type translocator 10 201 1.2E-42 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CF65_02430 699cf8992c2398f31ef8fbb471e048f3 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CF65_02430 699cf8992c2398f31ef8fbb471e048f3 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 36.483 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 CF65_02430 699cf8992c2398f31ef8fbb471e048f3 113 SUPERFAMILY SSF89360 7 102 2.22E-31 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CF65_02430 699cf8992c2398f31ef8fbb471e048f3 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 8 112 6.7E-39 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CF65_02430 699cf8992c2398f31ef8fbb471e048f3 113 Gene3D G3DSA:2.60.300.12 8 103 6.7E-36 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CF65_02430 699cf8992c2398f31ef8fbb471e048f3 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 5.3E-22 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CF65_00275 73a2ad8868b5313a07d8ec58f06cfcbd 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 172 1.0E-17 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CF65_02202 fa4707b901e2bbd9e2c6fcb3f9b0257d 337 Pfam PF07715 TonB-dependent Receptor Plug Domain 3 83 1.6E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain CF65_02202 fa4707b901e2bbd9e2c6fcb3f9b0257d 337 SUPERFAMILY SSF56935 5 263 1.74E-26 T 14-10-2018 CF65_02202 fa4707b901e2bbd9e2c6fcb3f9b0257d 337 Gene3D G3DSA:2.170.130.10 1 98 5.8E-20 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CF65_01369 297b7a21b42404cd9eb7797e0549b402 162 Pfam PF04093 rod shape-determining protein MreD 4 155 3.0E-38 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CF65_01369 297b7a21b42404cd9eb7797e0549b402 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 6.6E-33 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CF65_01369 297b7a21b42404cd9eb7797e0549b402 162 PIRSF PIRSF018472 1 162 2.1E-43 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type CF65_00851 d8b3292dc70624b19e80d53bab3b361c 532 Pfam PF02554 Carbon starvation protein CstA 4 330 6.6E-45 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CF65_00851 d8b3292dc70624b19e80d53bab3b361c 532 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 370 479 2.3E-19 T 14-10-2018 IPR025299 CstA, C-terminal domain CF65_02639 390f372c5c60d697fd5b45635602a984 418 Gene3D G3DSA:3.40.50.2000 229 384 3.3E-39 T 14-10-2018 CF65_02639 390f372c5c60d697fd5b45635602a984 418 SUPERFAMILY SSF53756 70 407 3.35E-12 T 14-10-2018 CF65_02639 390f372c5c60d697fd5b45635602a984 418 Gene3D G3DSA:3.40.50.11090 59 228 1.2E-13 T 14-10-2018 CF65_00872 047ced008236177ec55b6b8f22c4bf28 167 Pfam PF16971 Rough colony protein B, tight adherence - tad - subunit 1 167 6.1E-78 T 14-10-2018 IPR031579 Rough colony protein B CF65_02008 4bec00efd180ab57d08402d41e47e3df 117 SUPERFAMILY SSF53335 1 115 8.31E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CF65_01475 c438317b5eb4f2a3bd77bbc8116c48fb 329 Pfam PF13310 Virulence protein RhuM family 63 310 1.3E-103 T 14-10-2018 IPR011204 Virulence protein RhuM-like CF65_01475 c438317b5eb4f2a3bd77bbc8116c48fb 329 PIRSF PIRSF015268 1 329 8.7E-135 T 14-10-2018 IPR011204 Virulence protein RhuM-like CF65_01519 6dbcf90254fa969109d7bab318df680f 222 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 15 132 2.0E-47 T 14-10-2018 IPR013559 YheO-like CF65_01519 6dbcf90254fa969109d7bab318df680f 222 Pfam PF08348 YheO-like PAS domain 16 123 1.4E-31 T 14-10-2018 IPR013559 YheO-like CF65_01519 6dbcf90254fa969109d7bab318df680f 222 Pfam PF13309 HTH domain 159 214 1.9E-18 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain CF65_00288 a46e320b02af3cd7a3008018255ffdf7 261 Pfam PF06738 Putative threonine/serine exporter 16 253 4.2E-64 T 14-10-2018 IPR010619 Putative threonine/serine exporter CF65_02635 3c69b55eab1d3f03f1d1d6068ea43983 126 Pfam PF10066 Uncharacterized conserved protein (DUF2304) 5 109 8.6E-21 T 14-10-2018 IPR019277 Protein of unknown function DUF2304 CF65_00878 09d3e4a9e33d9f8352a03f303efd86ca 191 Pfam PF07811 TadE-like protein 10 39 4.3E-5 T 14-10-2018 IPR012495 TadE-like CF65_00386 cd53978b62f5c543a968d18e0584113f 330 SUPERFAMILY SSF55681 5 329 2.34E-97 T 14-10-2018 CF65_00386 cd53978b62f5c543a968d18e0584113f 330 Pfam PF03590 Aspartate-ammonia ligase 9 243 6.9E-94 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CF65_00386 cd53978b62f5c543a968d18e0584113f 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 1.7E-199 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CF65_00386 cd53978b62f5c543a968d18e0584113f 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 46.677 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CF65_00386 cd53978b62f5c543a968d18e0584113f 330 PIRSF PIRSF001555 1 330 9.0E-157 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CF65_00386 cd53978b62f5c543a968d18e0584113f 330 Gene3D G3DSA:3.30.930.10 1 330 5.9E-145 T 14-10-2018 CF65_00399 8bb87d9cc17c0783ef464a51c18637e0 72 Pfam PF04325 Protein of unknown function (DUF465) 19 66 3.7E-17 T 14-10-2018 IPR007420 Protein of unknown function DUF465 CF65_00399 8bb87d9cc17c0783ef464a51c18637e0 72 Gene3D G3DSA:1.20.58.660 1 72 2.8E-25 T 14-10-2018 CF65_00071 07376c0a960303d0addb27d8cf14ec60 275 Pfam PF04228 Putative neutral zinc metallopeptidase 1 275 9.5E-124 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CF65_01190 0f7fe0ef43779d8af80249d433ea985a 240 SUPERFAMILY SSF53448 2 233 1.22E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_01190 0f7fe0ef43779d8af80249d433ea985a 240 Pfam PF00535 Glycosyl transferase family 2 6 134 6.0E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CF65_01190 0f7fe0ef43779d8af80249d433ea985a 240 Gene3D G3DSA:3.90.550.10 1 214 5.8E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CF65_00580 1c211dd6c1c6324b7a2e682ce24cf5cf 182 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 19 182 2.1E-74 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CF65_00580 1c211dd6c1c6324b7a2e682ce24cf5cf 182 Pfam PF03350 Uncharacterized protein family, UPF0114 23 139 2.6E-39 T 14-10-2018 IPR005134 Uncharacterised protein family UPF0114 CF65_00580 1c211dd6c1c6324b7a2e682ce24cf5cf 182 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 182 82.869 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CF65_02738 d0ed325c26a37193dc1fae820b2098ce 421 Pfam PF01384 Phosphate transporter family 26 409 3.0E-108 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CF65_01424 8a48dfcf2c916ce18e8e48f8525a8b14 138 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 87 138 5.0E-16 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CF65_01424 8a48dfcf2c916ce18e8e48f8525a8b14 138 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 20 77 2.3E-12 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CF65_01424 8a48dfcf2c916ce18e8e48f8525a8b14 138 Gene3D G3DSA:3.40.1020.10 1 138 6.8E-44 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CF65_01424 8a48dfcf2c916ce18e8e48f8525a8b14 138 SUPERFAMILY SSF55021 85 138 1.1E-14 T 14-10-2018 CF65_01424 8a48dfcf2c916ce18e8e48f8525a8b14 138 SUPERFAMILY SSF55021 15 80 2.29E-12 T 14-10-2018 CF65_02235 cd4ebe742ceeedd0fb113d3c16731b02 153 Gene3D G3DSA:2.30.30.220 1 127 1.1E-53 T 14-10-2018 IPR036760 SspB-like superfamily CF65_02235 cd4ebe742ceeedd0fb113d3c16731b02 153 SUPERFAMILY SSF101738 3 116 5.36E-49 T 14-10-2018 IPR036760 SspB-like superfamily CF65_02235 cd4ebe742ceeedd0fb113d3c16731b02 153 Pfam PF04386 Stringent starvation protein B 8 153 5.1E-41 T 14-10-2018 IPR007481 Stringent starvation protein B CF65_02235 cd4ebe742ceeedd0fb113d3c16731b02 153 PIRSF PIRSF005276 2 153 3.8E-61 T 14-10-2018 IPR007481 Stringent starvation protein B CF65_00202 2376a0c1c6f41134bc27e8b8e50bbd6e 265 Pfam PF01925 Sulfite exporter TauE/SafE 9 262 5.4E-48 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CF65_02714 956f87895628e96be79086a37e204cd8 427 Pfam PF04403 Paraquat-inducible protein A 260 415 3.3E-48 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like CF65_02714 956f87895628e96be79086a37e204cd8 427 Pfam PF04403 Paraquat-inducible protein A 55 206 1.9E-35 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like CF65_02714 956f87895628e96be79086a37e204cd8 427 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 16 415 3.0E-161 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type CF65_02310 1c4803286faa511c82bdbcca2bd7502e 138 SUPERFAMILY SSF103481 43 137 5.89E-15 T 14-10-2018 CF65_02310 1c4803286faa511c82bdbcca2bd7502e 138 Pfam PF00892 EamA-like transporter family 3 137 7.8E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_01850 e11ffbb7774c41f4bc5ed73b310b3479 275 SUPERFAMILY SSF51735 8 265 9.69E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily CF65_01850 e11ffbb7774c41f4bc5ed73b310b3479 275 Gene3D G3DSA:3.40.50.720 1 270 2.4E-48 T 14-10-2018 CF65_01635 0a4cb194eeacdeb2b2efd29272075ae9 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 1.0E-46 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_01635 0a4cb194eeacdeb2b2efd29272075ae9 376 Gene3D G3DSA:1.10.620.20 2 340 1.6E-146 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CF65_01635 0a4cb194eeacdeb2b2efd29272075ae9 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CF65_01635 0a4cb194eeacdeb2b2efd29272075ae9 376 SUPERFAMILY SSF47240 3 340 7.5E-116 T 14-10-2018 IPR009078 Ferritin-like superfamily CF65_01658 48e549ecf17f48052ffcf2a4d752b09d 299 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 68 200 2.4E-48 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 CF65_01185 aa8ed23ed453d2d1b4b2b0094c33a1b7 757 SUPERFAMILY SSF82866 619 756 6.8E-18 T 14-10-2018 CF65_01185 aa8ed23ed453d2d1b4b2b0094c33a1b7 757 SUPERFAMILY SSF82866 190 398 4.45E-12 T 14-10-2018 CF65_01434 17a8e7bc151a6af2da2f87f05b91e6d0 437 Pfam PF04932 O-Antigen ligase 205 359 3.4E-21 T 14-10-2018 IPR007016 O-antigen ligase-related CF65_01223 51f108e8bd71ead55f2cd973397e7ebb 471 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 49 454 1.8E-137 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CF65_01223 51f108e8bd71ead55f2cd973397e7ebb 471 Pfam PF05525 Branched-chain amino acid transport protein 42 467 3.1E-139 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CF65_02351 0304db7792a2b40175890bc3fa170bdf 52 Gene3D G3DSA:3.30.310.170 1 52 5.9E-10 T 14-10-2018 CF65_02351 0304db7792a2b40175890bc3fa170bdf 52 Pfam PF06804 NlpB/DapX lipoprotein 4 50 1.2E-10 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein CF65_00573 ed8ea69489837bcb9cb222921cb94c25 417 TIGRFAM TIGR00688 rarD: protein RarD 127 378 5.6E-84 T 14-10-2018 IPR004626 RarD protein GO:0005887 CF65_00573 ed8ea69489837bcb9cb222921cb94c25 417 SUPERFAMILY SSF103481 185 264 3.14E-7 T 14-10-2018 CF65_00573 ed8ea69489837bcb9cb222921cb94c25 417 Pfam PF00892 EamA-like transporter family 127 265 4.6E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CF65_00535 2f68cfba5727b8732f4174aa408e256e 115 Pfam PF13384 Homeodomain-like domain 8 51 6.1E-6 T 14-10-2018 CF65_00535 2f68cfba5727b8732f4174aa408e256e 115 SUPERFAMILY SSF46689 2 109 2.69E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_02180 868abf86ff8631d24a3fd2f6a4d586b6 92 SUPERFAMILY SSF143011 1 92 4.05E-16 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_02180 868abf86ff8631d24a3fd2f6a4d586b6 92 Gene3D G3DSA:3.30.2310.20 1 92 2.9E-37 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CF65_02180 868abf86ff8631d24a3fd2f6a4d586b6 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 92 2.6E-29 T 14-10-2018 IPR007711 Toxin HigB-1 CF65_00528 c456bcbe6e3240c3f6b1d7c3eb795ede 76 Pfam PF07119 Protein of unknown function (DUF1375) 15 71 5.4E-7 T 14-10-2018 IPR010780 Protein of unknown function DUF1375 CF65_01595 ae16e53b80e1bdd1ce7a8500a7188865 205 SUPERFAMILY SSF103473 12 193 1.7E-8 T 14-10-2018 IPR036259 MFS transporter superfamily CF65_01595 ae16e53b80e1bdd1ce7a8500a7188865 205 Gene3D G3DSA:1.20.1250.20 8 198 3.8E-12 T 14-10-2018 CF65_01063 cc8508f188472360f77cf01dd9edf6c9 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 5.2E-44 T 14-10-2018 IPR013527 YicC-like, N-terminal CF65_01063 cc8508f188472360f77cf01dd9edf6c9 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.4E-126 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 CF65_01063 cc8508f188472360f77cf01dd9edf6c9 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 1.4E-33 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 CF65_01088 a44c502701800063ab883f5ee1022bc4 167 Gene3D G3DSA:3.30.160.150 17 165 1.2E-49 T 14-10-2018 CF65_01088 a44c502701800063ab883f5ee1022bc4 167 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 162 23.98 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CF65_01088 a44c502701800063ab883f5ee1022bc4 167 Pfam PF04390 Lipopolysaccharide-assembly 34 157 1.1E-11 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CF65_00513 a8ae57dcb8292d612360e162cd58fafd 219 Gene3D G3DSA:3.30.2350.10 4 217 6.6E-70 T 14-10-2018 CF65_00513 a8ae57dcb8292d612360e162cd58fafd 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_00513 a8ae57dcb8292d612360e162cd58fafd 219 Pfam PF00849 RNA pseudouridylate synthase 23 169 2.3E-28 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_00513 a8ae57dcb8292d612360e162cd58fafd 219 SUPERFAMILY SSF55120 8 215 3.36E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_02257 2e80f2418a3a7a237cc3b9bf9424be52 84 SUPERFAMILY SSF143120 11 70 2.75E-6 T 14-10-2018 IPR036165 YefM-like superfamily CF65_02257 2e80f2418a3a7a237cc3b9bf9424be52 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 72 5.8E-7 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CF65_00885 942b88ecea6e7f4beb1ebb0332232264 91 Gene3D G3DSA:3.30.70.1560 1 65 3.9E-22 T 14-10-2018 CF65_00885 942b88ecea6e7f4beb1ebb0332232264 91 SUPERFAMILY SSF55120 9 89 6.48E-15 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CF65_00943 0c19dabb3c1d22bed7fcc7b88e9950d7 44 Pfam PF00575 S1 RNA binding domain 10 38 1.4E-4 T 14-10-2018 IPR003029 S1 domain GO:0003676 CF65_00943 0c19dabb3c1d22bed7fcc7b88e9950d7 44 Gene3D G3DSA:2.40.50.140 9 44 1.3E-5 T 14-10-2018 CF65_01577 8c38eee405c59b82ca3cf8e3509a17ae 359 Pfam PF05128 Domain of unknown function (DUF697) 186 343 1.7E-53 T 14-10-2018 IPR021147 Protein of unknown function DUF697 CF65_01577 8c38eee405c59b82ca3cf8e3509a17ae 359 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 5 350 35.583 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 CF65_01577 8c38eee405c59b82ca3cf8e3509a17ae 359 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 48 343 1.8E-111 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 CF65_00776 3535a3fc444e3a48f8620cbe2c0bfca9 98 Gene3D G3DSA:3.30.70.1060 1 98 2.6E-39 T 14-10-2018 CF65_00776 3535a3fc444e3a48f8620cbe2c0bfca9 98 SUPERFAMILY SSF54909 1 98 1.79E-30 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel CF65_00776 3535a3fc444e3a48f8620cbe2c0bfca9 98 Pfam PF03795 YCII-related domain 1 95 1.9E-28 T 14-10-2018 IPR005545 YCII-related CF65_01491 a400ca73a1cafcabd5d6e72d5cc5e77d 125 Pfam PF03899 ATP synthase I chain 17 109 4.7E-11 T 14-10-2018 IPR005598 ATP synthase protein I CF65_01723 60337db11e802c51f0ca372377f76295 142 Pfam PF10881 Protein of unknown function (DUF2726) 1 118 2.4E-14 T 14-10-2018 IPR024402 Domain of unknown function DUF2726 CF65_02455 20a0d5b39600e064a9ae5ab476e32241 129 Pfam PF04241 Protein of unknown function (DUF423) 19 109 6.4E-26 T 14-10-2018 IPR006696 Protein of unknown function DUF423 CF65_01249 c55cb1455d1c7ef2be8c0670a3dc4f3f 119 SUPERFAMILY SSF56300 3 89 3.11E-8 T 14-10-2018 CF65_01508 14d07a1c4333555a5d4b5c2d0f5f2e27 440 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 8 372 1.2E-155 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CF65_01508 14d07a1c4333555a5d4b5c2d0f5f2e27 440 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 8 439 1.3E-200 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CF65_01508 14d07a1c4333555a5d4b5c2d0f5f2e27 440 PIRSF PIRSF004539 3 440 3.8E-186 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CF65_00033 a6a85ddd2482240d8bfa46917e8b4c93 257 Pfam PF06527 TniQ 19 160 1.8E-17 T 14-10-2018 IPR009492 TniQ CF65_02808 cd600a503963a4e0f525ab4c221e4831 78 Pfam PF06261 Actinobacillus actinomycetemcomitans leukotoxin activator LktC 1 69 4.1E-42 T 14-10-2018 IPR009369 Actinobacillus actinomycetemcomitans leukotoxin activator LktC CF65_00169 cb1dc08ea9f054ce179d7ba8418e3490 184 ProDom PD104362 PM1073 HI0966 10 184 2.0E-58 T 14-10-2018 IPR035279 Protein of unknown function DUF5358 CF65_00169 cb1dc08ea9f054ce179d7ba8418e3490 184 Pfam PF17311 Family of unknown function (DUF5358) 26 184 8.9E-79 T 14-10-2018 IPR035279 Protein of unknown function DUF5358 CF65_00501 c6f02ac372669d76e74a0830ddb4c87e 214 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 3 150 8.5E-27 T 14-10-2018 IPR015032 MTH538 TIR-like domain CF65_02547 d3e2973183fb691c07f50892a6ef4077 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 3.8E-35 T 14-10-2018 IPR006214 Bax inhibitor 1-related CF65_01120 a36106d838299f6e7c6f426ca8a68b25 264 Pfam PF01578 Cytochrome C assembly protein 41 262 7.2E-31 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CF65_01671 a2cc0333b1bda09ccaf5df5e02172b5b 99 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 93 1.2E-7 T 14-10-2018 IPR009241 Toxin HigB-like CF65_01671 a2cc0333b1bda09ccaf5df5e02172b5b 99 PIRSF PIRSF028744 1 98 1.7E-42 T 14-10-2018 IPR014056 Addiction module killer protein, predicted CF65_01671 a2cc0333b1bda09ccaf5df5e02172b5b 99 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 4 97 1.2E-40 T 14-10-2018 IPR014056 Addiction module killer protein, predicted CF65_02975 8d82e9db82c90ab6c88228c4bd9c09b3 168 Pfam PF10063 Uncharacterized integral membrane protein (DUF2301) 86 164 7.9E-6 T 14-10-2018 IPR019275 Protein of unknown function DUF2301 CF65_00430 5d8e1aa3a1c3c5bba3af0ff3bfae581e 227 Gene3D G3DSA:3.40.109.10 31 216 3.3E-15 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CF65_01056 19abfe1b644f449534784e42bc67c20b 74 SUPERFAMILY SSF51395 2 73 7.14E-10 T 14-10-2018 CF65_01056 19abfe1b644f449534784e42bc67c20b 74 Pfam PF01207 Dihydrouridine synthase (Dus) 4 74 3.4E-13 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CF65_01056 19abfe1b644f449534784e42bc67c20b 74 Gene3D G3DSA:3.20.20.70 1 74 1.4E-13 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CF65_01995 fd4f6c306bf1f47c9c9b132e25045d3d 65 SUPERFAMILY SSF48600 1 40 9.61E-8 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CF65_01140 e065e359a140f3aaa2a44d8b9c63f222 279 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 268 4.2E-87 T 14-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CF65_02224 d45f0a477b6368e2cd1e2c815f2ee233 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 292 3.7E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CF65_02482 ceece2f969a83de4f536086ec3c4a258 210 PIRSF PIRSF008159 2 210 2.0E-63 T 14-10-2018 IPR016537 Uncharacterised conserved protein UCP008159, CF65_02482 ceece2f969a83de4f536086ec3c4a258 210 Pfam PF06226 Protein of unknown function (DUF1007) 6 209 1.1E-53 T 14-10-2018 IPR010412 Protein of unknown function DUF1007 CF65_00019 115be70fc8e760bfa85757badfddd1db 348 Pfam PF14130 Domain of unknown function (DUF4297) 11 210 2.2E-29 T 14-10-2018 IPR025382 Domain of unknown function DUF4297 CF65_00695 d2cfd146c4326e1e6d8cee00575202bf 216 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 11 200 9.0E-48 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 CF65_00695 d2cfd146c4326e1e6d8cee00575202bf 216 Gene3D G3DSA:3.40.50.300 6 216 4.9E-60 T 14-10-2018 CF65_00695 d2cfd146c4326e1e6d8cee00575202bf 216 PRINTS PR00988 Uridine kinase signature 180 193 3.3E-38 T 14-10-2018 CF65_00695 d2cfd146c4326e1e6d8cee00575202bf 216 PRINTS PR00988 Uridine kinase signature 43 54 3.3E-38 T 14-10-2018 CF65_00695 d2cfd146c4326e1e6d8cee00575202bf 216 PRINTS PR00988 Uridine kinase signature 88 103 3.3E-38 T 14-10-2018 CF65_00695 d2cfd146c4326e1e6d8cee00575202bf 216 PRINTS PR00988 Uridine kinase signature 158 169 3.3E-38 T 14-10-2018 CF65_00695 d2cfd146c4326e1e6d8cee00575202bf 216 PRINTS PR00988 Uridine kinase signature 144 154 3.3E-38 T 14-10-2018 CF65_00695 d2cfd146c4326e1e6d8cee00575202bf 216 PRINTS PR00988 Uridine kinase signature 9 26 3.3E-38 T 14-10-2018 CF65_00695 d2cfd146c4326e1e6d8cee00575202bf 216 TIGRFAM TIGR00235 udk: uridine kinase 6 213 2.8E-95 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 CF65_00695 d2cfd146c4326e1e6d8cee00575202bf 216 Hamap MF_00551 Uridine kinase [udk]. 6 214 38.54 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 CF65_00695 d2cfd146c4326e1e6d8cee00575202bf 216 SUPERFAMILY SSF52540 10 206 5.14E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CF65_01887 9f8accd4c9f4fd6f548a0fd80279fa97 128 Pfam PF05656 Protein of unknown function (DUF805) 11 111 1.2E-36 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CF65_01976 d9638e7345dfc65981819fdd50971783 180 Pfam PF02674 Colicin V production protein 2 139 2.0E-37 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CF65_00869 11714dbbec6937672725b5c57d512ade 142 Gene3D G3DSA:1.20.120.1220 4 140 3.8E-5 T 14-10-2018 CF65_00869 11714dbbec6937672725b5c57d512ade 142 Pfam PF01478 Type IV leader peptidase family 11 108 1.9E-13 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CF65_00337 11df702fc14556a0478d1f9c71e71a8d 134 Gene3D G3DSA:3.40.190.10 9 86 1.1E-5 T 14-10-2018 CF65_01154 4b1c7f7d88f96501cf6f413da23e1c1e 74 Pfam PF02416 mttA/Hcf106 family 4 60 3.6E-12 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CF65_01154 4b1c7f7d88f96501cf6f413da23e1c1e 74 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 71 23.616 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CF65_01154 4b1c7f7d88f96501cf6f413da23e1c1e 74 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.1E-20 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CF65_00341 925136e933befa1310d270de3f42d558 112 Pfam PF03795 YCII-related domain 2 84 1.7E-6 T 14-10-2018 IPR005545 YCII-related CF65_00341 925136e933befa1310d270de3f42d558 112 SUPERFAMILY SSF54909 1 86 1.96E-10 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel CF65_00390 1e23d07a08ab46a3b2551489ba5e5b32 353 Pfam PF01594 AI-2E family transporter 20 346 6.0E-78 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like CF65_02570 dfac39616c715966a5b8c558910a2e97 332 Pfam PF16872 Putative phage abortive infection protein 127 203 1.1E-16 T 14-10-2018 IPR031709 Putative phage abortive infection protein CF65_00166 aeeec3dd818232c8188e7a5196b811dc 95 Gene3D G3DSA:3.40.630.30 6 94 1.6E-23 T 14-10-2018 CF65_00166 aeeec3dd818232c8188e7a5196b811dc 95 Pfam PF14542 GCN5-related N-acetyl-transferase 19 91 2.0E-20 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase CF65_00166 aeeec3dd818232c8188e7a5196b811dc 95 SUPERFAMILY SSF55729 8 90 2.44E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase CF65_02751 6ef28dd3b8b3d639f723b322a930c717 529 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 3 525 3.4E-143 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CF65_02751 6ef28dd3b8b3d639f723b322a930c717 529 Pfam PF02652 L-lactate permease 4 522 1.6E-145 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CF65_00143 758566cf83344f3bec3bc94263231d54 424 Pfam PF02447 GntP family permease 9 414 1.0E-23 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CF65_01760 3f55ae8a1143e38d41da10dd290ee584 183 SUPERFAMILY SSF55326 5 157 3.14E-33 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CF65_01760 3f55ae8a1143e38d41da10dd290ee584 183 Pfam PF00586 AIR synthase related protein, N-terminal domain 55 154 3.3E-18 T 14-10-2018 IPR016188 PurM-like, N-terminal domain CF65_01760 3f55ae8a1143e38d41da10dd290ee584 183 Gene3D G3DSA:3.30.1330.10 6 159 2.0E-57 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CF65_02909 e7026a866932bcfd1cd4a9fd6995ddd3 129 Pfam PF07681 DoxX 13 89 2.0E-8 T 14-10-2018 IPR032808 DoxX family CF65_00046 3c7de81ac95c72c9c07a0c2a484c298e 221 Gene3D G3DSA:1.10.1130.10 25 161 3.6E-7 T 14-10-2018 CF65_00046 3c7de81ac95c72c9c07a0c2a484c298e 221 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 43 199 4.1E-62 T 14-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 CF65_00046 3c7de81ac95c72c9c07a0c2a484c298e 221 SUPERFAMILY SSF48695 34 204 3.44E-28 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily CF65_01409 0ab3db69d99f4602dfb1098b4c59a275 191 Pfam PF09335 SNARE associated Golgi protein 41 155 1.2E-11 T 14-10-2018 IPR032816 SNARE associated Golgi protein CF65_02826 9ad8ff226c690d49ee8a29bde308b08b 231 PIRSF PIRSF004525 1 231 6.8E-55 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted CF65_02558 c2c4487f9e3c848b6fe0910ea8c5f73a 157 PIRSF PIRSF028777 8 144 2.7E-49 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 CF65_02558 c2c4487f9e3c848b6fe0910ea8c5f73a 157 Pfam PF03733 Inner membrane component domain 11 60 1.3E-11 T 14-10-2018 IPR005185 Inner membrane component domain CF65_02558 c2c4487f9e3c848b6fe0910ea8c5f73a 157 Pfam PF03733 Inner membrane component domain 82 132 4.2E-17 T 14-10-2018 IPR005185 Inner membrane component domain CF65_00921 219def7e29be9e194a0067714c0cf53e 201 Pfam PF07274 Protein of unknown function (DUF1440) 27 177 2.4E-54 T 14-10-2018 IPR009898 Protein of unknown function DUF1440 CF65_01909 7d2b906b7b29f946f93f972508d57dd9 111 Gene3D G3DSA:1.10.260.40 1 72 1.6E-5 T 14-10-2018 CF65_01909 7d2b906b7b29f946f93f972508d57dd9 111 SUPERFAMILY SSF47413 4 63 4.72E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CF65_01046 03810beb2792037c07aeaeb85458fe0e 113 Pfam PF04320 Protein with unknown function (DUF469) 7 107 1.8E-39 T 14-10-2018 IPR007416 Protein of unknown function DUF469 CF65_02500 f5ae20581556efba0cd5005c069dc85f 296 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 91 283 4.0E-7 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase CF65_02500 f5ae20581556efba0cd5005c069dc85f 296 Gene3D G3DSA:3.60.10.10 73 294 1.3E-23 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CF65_02500 f5ae20581556efba0cd5005c069dc85f 296 SUPERFAMILY SSF56219 73 287 9.16E-29 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CF65_01345 095da537361f7d68cda6e9fdb6e20e83 186 Pfam PF02325 YGGT family 108 173 1.6E-16 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 CF65_01345 095da537361f7d68cda6e9fdb6e20e83 186 Pfam PF02325 YGGT family 10 78 9.4E-14 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 CF65_01263 4160684cf0f6910382da5af710c3cb09 75 SUPERFAMILY SSF103481 2 59 6.02E-6 T 14-10-2018 CF65_00435 19345586f996015c287d80e9001a294a 171 Pfam PF15561 Immunity protein 15 27 121 1.3E-8 T 14-10-2018 IPR028264 Immunity protein 15 CF65_01549 7e0581b7eb406c96c5dfa8627e8cb0f4 119 Pfam PF13518 Helix-turn-helix domain 9 59 6.1E-11 T 14-10-2018 CF65_01549 7e0581b7eb406c96c5dfa8627e8cb0f4 119 SUPERFAMILY SSF46689 2 103 5.02E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CF65_02715 14bcf0234ce590b65a39b3283a18511b 885 Pfam PF02470 MlaD protein 752 814 1.6E-8 T 14-10-2018 IPR003399 Mce/MlaD CF65_02715 14bcf0234ce590b65a39b3283a18511b 885 Pfam PF02470 MlaD protein 639 711 2.4E-9 T 14-10-2018 IPR003399 Mce/MlaD CF65_02715 14bcf0234ce590b65a39b3283a18511b 885 Pfam PF02470 MlaD protein 53 144 7.4E-14 T 14-10-2018 IPR003399 Mce/MlaD CF65_02715 14bcf0234ce590b65a39b3283a18511b 885 Pfam PF02470 MlaD protein 171 234 1.3E-5 T 14-10-2018 IPR003399 Mce/MlaD CF65_01349 dc902db908a985fc67a6787feab779c4 219 Pfam PF00881 Nitroreductase family 15 198 8.5E-25 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CF65_01349 dc902db908a985fc67a6787feab779c4 219 Gene3D G3DSA:3.40.109.10 2 219 5.1E-59 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CF65_01349 dc902db908a985fc67a6787feab779c4 219 SUPERFAMILY SSF55469 8 218 2.22E-57 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CF65_02861 43f77d91f3732068cc434ceb44359825 306 Pfam PF09925 Predicted membrane protein (DUF2157) 18 130 1.9E-18 T 14-10-2018 IPR018677 Domain of unknown function DUF2157 CF65_01095 d0dd04fad9dd7b3f0e93448bc4e0aa45 185 Pfam PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) 5 179 7.7E-75 T 14-10-2018 IPR019722 Glucose-6-phosphate 1-dehydrogenase, bacterial CF65_01330 a2da8a0eca6706126b75eb74b99369f3 230 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 9 191 3.8E-41 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 CF65_00936 d388cd1987b37c6f86d18c8965cf1a38 173 Pfam PF02653 Branched-chain amino acid transport system / permease component 14 151 1.3E-32 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CF65_00395 a6b5952a8936353898f2e195ee09fafb 98 ProDom PD050153 PM1128 HI0234 52 95 4.0E-9 T 14-10-2018 IPR035318 Protein of unknown function DUF5377 CF65_00395 a6b5952a8936353898f2e195ee09fafb 98 Pfam PF17347 Family of unknown function (DUF5377) 1 95 2.7E-50 T 14-10-2018 IPR035318 Protein of unknown function DUF5377 CF65_02220 fa0752052dde109c801facb19f3cb9ed 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 307 8.8E-46 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CF65_00300 af2f21ef12903aaf0cd0c0d8a4a12d06 163 Pfam PF07509 Protein of unknown function (DUF1523) 1 159 3.7E-67 T 14-10-2018 IPR011088 Bacteriophage phiNM3, A0EWY4 CF65_00020 7c3e6e087b5c549c2fa7c13afe6ce7a1 536 Gene3D G3DSA:3.40.50.300 1 280 2.4E-8 T 14-10-2018 CF65_00864 11c851bbeb41d891bbc34b9d6cefc5b7 233 Pfam PF17311 Family of unknown function (DUF5358) 56 194 1.2E-30 T 14-10-2018 IPR035279 Protein of unknown function DUF5358 CF65_02097 c9f70032e07ba36aeada0065e1513bde 201 Pfam PF09335 SNARE associated Golgi protein 29 156 4.0E-21 T 14-10-2018 IPR032816 SNARE associated Golgi protein