NJ8700_00020 SM00870 NJ8700_00020 NJ8700_00030 SM00028 Tetratricopeptide repeats NJ8700_00035 SM00530 Helix-turn-helix XRE-family like proteins NJ8700_00080 SM00382 ATPases associated with a variety of cellular activities NJ8700_00080 SM00464 Found in ATP-dependent protease La (LON) NJ8700_00105 SM00919 Malic enzyme, NAD binding domain NJ8700_00105 SM01274 NJ8700_00105 NJ8700_00110 SM00363 S4 RNA-binding domain NJ8700_00120 SM00382 ATPases associated with a variety of cellular activities NJ8700_00205 SM00028 Tetratricopeptide repeats NJ8700_00225 SM00460 Transglutaminase/protease-like homologues NJ8700_00255 SM00480 DNA polymerase III beta subunit NJ8700_00260 SM00382 ATPases associated with a variety of cellular activities NJ8700_00260 SM00760 Bacterial dnaA protein helix-turn-helix domain NJ8700_00305 SM00481 DNA polymerase alpha chain like domain NJ8700_00315 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NJ8700_00355 SM00357 Cold shock protein domain NJ8700_00400 SM00729 Elongator protein 3, MiaB family, Radical SAM NJ8700_00420 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NJ8700_00435 SM00878 Biotin carboxylase C-terminal domain NJ8700_00450 SM00358 Double-stranded RNA binding motif NJ8700_00450 SM00535 Ribonuclease III family NJ8700_00470 SM00986 Uracil DNA glycosylase superfamily NJ8700_00470 SM00987 UreE urease accessory protein, C-terminal domain NJ8700_00545 SM00563 Phosphate acyltransferases NJ8700_00575 SM00841 Elongation factor P, C-terminal NJ8700_00575 SM01185 NJ8700_00575 NJ8700_00625 SM00244 prohibitin homologues NJ8700_00630 SM00244 prohibitin homologues NJ8700_00675 SM01130 NJ8700_00675 NJ8700_00705 SM01230 NJ8700_00705 NJ8700_00715 SM00927 DNA mismatch repair enzyme MutH NJ8700_00755 SM00422 helix_turn_helix, mercury resistance NJ8700_00775 SM00382 ATPases associated with a variety of cellular activities NJ8700_00775 SM00994 ClpX C4-type zinc finger NJ8700_00775 SM01086 C-terminal, D2-small domain, of ClpB protein NJ8700_00900 SM00487 DEAD-like helicases superfamily NJ8700_00900 SM00490 helicase superfamily c-terminal domain NJ8700_00900 SM00982 NJ8700_00900 NJ8700_00900 SM01058 CarD-like/TRCF domain NJ8700_00920 SM00382 ATPases associated with a variety of cellular activities NJ8700_00925 SM00062 Bacterial periplasmic substrate-binding proteins NJ8700_00925 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NJ8700_00940 SM00062 Bacterial periplasmic substrate-binding proteins NJ8700_01020 SM00842 Cell division protein FtsA NJ8700_01025 SM00864 Tubulin/FtsZ family, GTPase domain NJ8700_01025 SM00865 Tubulin/FtsZ family, C-terminal domain NJ8700_01040 SM00830 Chorismate mutase type II NJ8700_01050 SM00387 Histidine kinase-like ATPases NJ8700_01090 SM00981 NJ8700_01090 NJ8700_01110 SM00479 NJ8700_01110 NJ8700_01145 SM00764 Citrate lyase ligase C-terminal domain NJ8700_01150 SM00116 Domain in cystathionine beta-synthase and other proteins. NJ8700_01150 SM01091 Transporter associated domain NJ8700_01160 SM00316 Ribosomal protein S1-like RNA-binding domain NJ8700_01170 SM00562 NJ8700_01170 NJ8700_01220 SM00788 Adenylosuccinate synthetase NJ8700_01235 SM00316 Ribosomal protein S1-like RNA-binding domain NJ8700_01265 SM00382 ATPases associated with a variety of cellular activities NJ8700_01280 SM01359 NJ8700_01280 NJ8700_01280 SM01360 NJ8700_01280 NJ8700_01385 SM00382 ATPases associated with a variety of cellular activities NJ8700_01410 SM01400 NJ8700_01410 NJ8700_01430 SM00287 Bacterial SH3 domain homologues NJ8700_01445 SM01118 NJ8700_01445 NJ8700_01450 SM00382 ATPases associated with a variety of cellular activities NJ8700_01455 SM00344 helix_turn_helix ASNC type NJ8700_01460 SM00843 NJ8700_01460 NJ8700_01470 SM00382 ATPases associated with a variety of cellular activities NJ8700_01490 SM00487 DEAD-like helicases superfamily NJ8700_01550 SM00345 helix_turn_helix gluconate operon transcriptional repressor NJ8700_01550 SM00866 NJ8700_01550 NJ8700_01600 SM00316 Ribosomal protein S1-like RNA-binding domain NJ8700_01605 SM00411 bacterial (prokaryotic) histone like domain NJ8700_01615 SM00028 Tetratricopeptide repeats NJ8700_01635 SM00434 DNA Topoisomerase IV NJ8700_01705 SM00382 ATPases associated with a variety of cellular activities NJ8700_01725 SM00671 Sel1-like repeats. NJ8700_01730 SM00316 Ribosomal protein S1-like RNA-binding domain NJ8700_01730 SM00357 Cold shock protein domain NJ8700_01730 SM00955 NJ8700_01730 NJ8700_01780 SM00463 Small MutS-related domain NJ8700_01795 SM00851 MGS-like domain NJ8700_01820 SM00382 ATPases associated with a variety of cellular activities NJ8700_01875 SM00849 Metallo-beta-lactamase superfamily NJ8700_01970 SM00382 ATPases associated with a variety of cellular activities NJ8700_01990 SM00945 ProQ/FINO family NJ8700_01995 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NJ8700_01995 SM00245 tail specific protease NJ8700_02010 SM00849 Metallo-beta-lactamase superfamily NJ8700_02015 SM00861 Transketolase, pyrimidine binding domain NJ8700_02030 SM00881 CoA binding domain NJ8700_02080 SM00448 cheY-homologous receiver domain NJ8700_02080 SM00862 Transcriptional regulatory protein, C terminal NJ8700_02085 SM00387 Histidine kinase-like ATPases NJ8700_02085 SM00388 His Kinase A (phosphoacceptor) domain NJ8700_02115 SM00977 TilS substrate C-terminal domain NJ8700_02130 SM00244 prohibitin homologues NJ8700_02240 SM00530 Helix-turn-helix XRE-family like proteins NJ8700_02310 SM00507 HNH nucleases NJ8700_02480 SM00116 Domain in cystathionine beta-synthase and other proteins. NJ8700_02480 SM01240 NJ8700_02480 NJ8700_02515 SM00382 ATPases associated with a variety of cellular activities NJ8700_02520 SM00729 Elongator protein 3, MiaB family, Radical SAM NJ8700_02520 SM00876 Biotin and Thiamin Synthesis associated domain NJ8700_02525 SM00487 DEAD-like helicases superfamily NJ8700_02545 SM00612 NJ8700_02545 NJ8700_02575 SM01130 NJ8700_02575 NJ8700_02650 SM00382 ATPases associated with a variety of cellular activities NJ8700_02650 SM00487 DEAD-like helicases superfamily NJ8700_02650 SM00490 helicase superfamily c-terminal domain NJ8700_02650 SM00847 Helicase associated domain (HA2) Add an annotation NJ8700_02670 SM00382 ATPases associated with a variety of cellular activities NJ8700_02740 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NJ8700_02800 SM00382 ATPases associated with a variety of cellular activities NJ8700_02805 SM00382 ATPases associated with a variety of cellular activities NJ8700_02865 SM00853 MutL C terminal dimerisation domain NJ8700_02865 SM01340 NJ8700_02865 NJ8700_02870 SM00257 Lysin motif NJ8700_02870 SM00646 NJ8700_02870 NJ8700_02890 SM00479 NJ8700_02890 NJ8700_02940 SM00014 Acid phosphatase homologues NJ8700_02965 SM00382 ATPases associated with a variety of cellular activities NJ8700_03045 SM00830 Chorismate mutase type II NJ8700_03070 SM00095 Transthyretin NJ8700_03130 SM01321 NJ8700_03130 NJ8700_03140 SM00382 ATPases associated with a variety of cellular activities NJ8700_03165 SM01018 B12 binding domain NJ8700_03175 SM00382 ATPases associated with a variety of cellular activities NJ8700_03190 SM00382 ATPases associated with a variety of cellular activities NJ8700_03195 SM01005 Alanine racemase, C-terminal domain NJ8700_03270 SM00382 ATPases associated with a variety of cellular activities NJ8700_03305 SM00947 Carbonic anhydrase NJ8700_03310 SM00749 bacterial OsmY and nodulation domain NJ8700_03375 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NJ8700_03405 SM00861 Transketolase, pyrimidine binding domain NJ8700_03440 SM00855 Phosphoglycerate mutase family NJ8700_03445 SM00155 Phospholipase D. Active site motifs. NJ8700_03490 SM00382 ATPases associated with a variety of cellular activities NJ8700_03515 SM00642 Alpha-amylase domain NJ8700_03520 SM00642 Alpha-amylase domain NJ8700_03575 SM00563 Phosphate acyltransferases NJ8700_03610 SM00100 Cyclic nucleotide-monophosphate binding domain NJ8700_03610 SM00419 helix_turn_helix, cAMP Regulatory protein NJ8700_03625 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain NJ8700_03625 SM00437 Bacterial DNA topoisomerase I DNA-binding domain NJ8700_03625 SM00493 NJ8700_03625 NJ8700_03635 SM00481 DNA polymerase alpha chain like domain NJ8700_03655 SM01001 AIR carboxylase NJ8700_03675 SM00382 ATPases associated with a variety of cellular activities NJ8700_03700 SM00382 ATPases associated with a variety of cellular activities NJ8700_03735 SM00411 bacterial (prokaryotic) histone like domain NJ8700_03740 SM00873 B3/4 domain NJ8700_03740 SM00874 tRNA synthetase B5 domain NJ8700_03740 SM00896 Ferredoxin-fold anticodon binding domain NJ8700_03760 SM00116 Domain in cystathionine beta-synthase and other proteins. NJ8700_03890 SM01133 NJ8700_03890 NJ8700_03910 SM00382 ATPases associated with a variety of cellular activities NJ8700_03965 SM00729 Elongator protein 3, MiaB family, Radical SAM NJ8700_04000 SM00981 NJ8700_04000 NJ8700_04020 SM00642 Alpha-amylase domain NJ8700_04050 SM00382 ATPases associated with a variety of cellular activities NJ8700_04090 SM00357 Cold shock protein domain NJ8700_04130 SM00382 ATPases associated with a variety of cellular activities NJ8700_04145 SM00528 Domain in histone-like proteins of HNS family NJ8700_04185 SM00354 helix_turn _helix lactose operon repressor NJ8700_04200 SM00354 helix_turn _helix lactose operon repressor NJ8700_04215 SM00382 ATPases associated with a variety of cellular activities NJ8700_04235 SM01103 NJ8700_04235 NJ8700_04255 SM00852 Probable molybdopterin binding domain NJ8700_04275 SM00642 Alpha-amylase domain NJ8700_04280 SM00382 ATPases associated with a variety of cellular activities NJ8700_04305 SM00642 Alpha-amylase domain NJ8700_04380 SM00421 helix_turn_helix, Lux Regulon NJ8700_04395 SM00642 Alpha-amylase domain NJ8700_04460 SM00849 Metallo-beta-lactamase superfamily NJ8700_04465 SM00382 ATPases associated with a variety of cellular activities NJ8700_04485 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NJ8700_04485 SM00465 GIY-YIG type nucleases (URI domain) NJ8700_04495 SM00354 helix_turn _helix lactose operon repressor NJ8700_04505 SM01038 Beta galactosidase small chain NJ8700_04525 SM00382 ATPases associated with a variety of cellular activities NJ8700_04545 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NJ8700_04545 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NJ8700_04555 SM00363 S4 RNA-binding domain NJ8700_04565 SM00640 Glycosyl hydrolases family 32 NJ8700_04590 SM00316 Ribosomal protein S1-like RNA-binding domain NJ8700_04645 SM00344 helix_turn_helix ASNC type NJ8700_04700 SM00937 NJ8700_04700 NJ8700_04715 SM00836 DALR anticodon binding domain NJ8700_04715 SM01016 Arginyl tRNA synthetase N terminal dom NJ8700_04730 SM00507 HNH nucleases NJ8700_04735 SM00271 DnaJ molecular chaperone homology domain NJ8700_04965 SM01235 NJ8700_04965 NJ8700_04970 SM00341 Helicase and RNase D C-terminal NJ8700_04970 SM00474 3'-5' exonuclease NJ8700_04990 SM00487 DEAD-like helicases superfamily NJ8700_04990 SM00491 NJ8700_04990 NJ8700_05010 SM00382 ATPases associated with a variety of cellular activities NJ8700_05030 SM00382 ATPases associated with a variety of cellular activities NJ8700_05035 SM00382 ATPases associated with a variety of cellular activities NJ8700_05120 SM00354 helix_turn _helix lactose operon repressor NJ8700_05130 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NJ8700_05150 SM00382 ATPases associated with a variety of cellular activities NJ8700_05170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NJ8700_05175 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NJ8700_05240 SM00900 NJ8700_05240 NJ8700_05250 SM00478 endonuclease III NJ8700_05250 SM00525 NJ8700_05250 NJ8700_05260 SM00861 Transketolase, pyrimidine binding domain NJ8700_05280 SM00382 ATPases associated with a variety of cellular activities NJ8700_05285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NJ8700_05315 SM00318 Staphylococcal nuclease homologues NJ8700_05355 SM00244 prohibitin homologues NJ8700_05385 SM00382 ATPases associated with a variety of cellular activities NJ8700_05400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NJ8700_05505 SM00382 ATPases associated with a variety of cellular activities NJ8700_05550 SM00937 NJ8700_05550 NJ8700_05565 SM00271 DnaJ molecular chaperone homology domain NJ8700_05570 SM00173 Ras subfamily of RAS small GTPases NJ8700_05615 SM00382 ATPases associated with a variety of cellular activities NJ8700_05655 SM00271 DnaJ molecular chaperone homology domain NJ8700_05700 SM00487 DEAD-like helicases superfamily NJ8700_05700 SM00490 helicase superfamily c-terminal domain NJ8700_05705 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NJ8700_05710 SM00382 ATPases associated with a variety of cellular activities NJ8700_05725 SM00387 Histidine kinase-like ATPases NJ8700_05725 SM00433 TopoisomeraseII NJ8700_05730 SM00434 DNA Topoisomerase IV NJ8700_05755 SM00530 Helix-turn-helix XRE-family like proteins NJ8700_05775 SM01022 NJ8700_05775 NJ8700_05830 SM01007 Class II Aldolase and Adducin N-terminal domain NJ8700_05840 SM00420 helix_turn_helix, Deoxyribose operon repressor NJ8700_05840 SM01134 NJ8700_05840 NJ8700_05860 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family NJ8700_05910 SM00354 helix_turn _helix lactose operon repressor NJ8700_05920 SM00382 ATPases associated with a variety of cellular activities NJ8700_05930 SM00073 Histidine Phosphotransfer domain NJ8700_05930 SM00387 Histidine kinase-like ATPases NJ8700_05930 SM00388 His Kinase A (phosphoacceptor) domain NJ8700_05930 SM00448 cheY-homologous receiver domain NJ8700_05935 SM00825 Beta-ketoacyl synthase NJ8700_06015 SM00382 ATPases associated with a variety of cellular activities NJ8700_06030 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain NJ8700_06030 SM00437 Bacterial DNA topoisomerase I DNA-binding domain NJ8700_06030 SM00493 NJ8700_06030 NJ8700_06035 SM00493 NJ8700_06035 NJ8700_06065 SM00382 ATPases associated with a variety of cellular activities NJ8700_06125 SM01323 NJ8700_06125 NJ8700_06205 SM00671 Sel1-like repeats. NJ8700_06225 SM01209 NJ8700_06225 NJ8700_06225 SM01210 NJ8700_06225 NJ8700_06230 SM00798 AICARFT/IMPCHase bienzyme NJ8700_06230 SM00851 MGS-like domain NJ8700_06350 SM00382 ATPases associated with a variety of cellular activities NJ8700_06355 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NJ8700_06420 SM00479 NJ8700_06420 NJ8700_06435 SM00729 Elongator protein 3, MiaB family, Radical SAM NJ8700_06510 SM00382 ATPases associated with a variety of cellular activities NJ8700_06515 SM00382 ATPases associated with a variety of cellular activities NJ8700_06520 SM00448 cheY-homologous receiver domain NJ8700_06520 SM00862 Transcriptional regulatory protein, C terminal NJ8700_06555 SM00316 Ribosomal protein S1-like RNA-binding domain NJ8700_06560 SM00363 S4 RNA-binding domain NJ8700_06630 SM00925 MltA specific insert domain NJ8700_06700 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NJ8700_06705 SM00072 Guanylate kinase homologues. NJ8700_06710 SM01409 NJ8700_06710 NJ8700_06715 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NJ8700_06715 SM00954 Region found in RelA / SpoT proteins NJ8700_06720 SM00487 DEAD-like helicases superfamily NJ8700_06720 SM00490 helicase superfamily c-terminal domain NJ8700_06730 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. NJ8700_06750 SM00382 ATPases associated with a variety of cellular activities NJ8700_06765 SM00382 ATPases associated with a variety of cellular activities NJ8700_06850 SM00984 UDP binding domain NJ8700_06855 SM00487 DEAD-like helicases superfamily NJ8700_06855 SM00490 helicase superfamily c-terminal domain NJ8700_06860 SM00028 Tetratricopeptide repeats NJ8700_06865 SM00316 Ribosomal protein S1-like RNA-binding domain NJ8700_06865 SM00322 K homology RNA-binding domain NJ8700_06875 SM00644 NJ8700_06875 NJ8700_06955 SM01211 NJ8700_06955 NJ8700_07005 SM00840 NJ8700_07005 NJ8700_07010 SM00729 Elongator protein 3, MiaB family, Radical SAM NJ8700_07025 SM00936 Penicillin-binding protein 5, C-terminal domain NJ8700_07055 SM00487 DEAD-like helicases superfamily NJ8700_07055 SM00490 helicase superfamily c-terminal domain NJ8700_07060 SM00357 Cold shock protein domain NJ8700_07060 SM00382 ATPases associated with a variety of cellular activities NJ8700_07060 SM00959 Rho termination factor, N-terminal domain NJ8700_07075 SM00822 NJ8700_07075 NJ8700_07080 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. NJ8700_07140 SM00195 Dual specificity phosphatase, catalytic domain NJ8700_07160 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase NJ8700_07180 SM01091 Transporter associated domain NJ8700_07215 SM00938 Nitrogen regulatory protein P-II NJ8700_07255 SM00852 Probable molybdopterin binding domain NJ8700_07265 SM00563 Phosphate acyltransferases NJ8700_07305 SM00935 Outer membrane protein (OmpH-like) NJ8700_07315 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NJ8700_07350 SM00382 ATPases associated with a variety of cellular activities NJ8700_07355 SM00917 LeuA allosteric (dimerisation) domain NJ8700_07360 SM01329 NJ8700_07360 NJ8700_07410 SM01091 Transporter associated domain NJ8700_07420 SM00382 ATPases associated with a variety of cellular activities NJ8700_07420 SM00962 SRP54-type protein, GTPase domain NJ8700_07420 SM00963 SRP54-type protein, helical bundle domain NJ8700_07430 SM00563 Phosphate acyltransferases NJ8700_07475 SM00838 Elongation factor G C-terminus NJ8700_07475 SM00889 Elongation factor G, domain IV NJ8700_07485 SM00316 Ribosomal protein S1-like RNA-binding domain NJ8700_07485 SM00732 Likely ribonuclease with RNase H fold. NJ8700_07540 SM00421 helix_turn_helix, Lux Regulon NJ8700_07540 SM00448 cheY-homologous receiver domain NJ8700_07605 SM00900 NJ8700_07605 NJ8700_07655 SM00478 endonuclease III NJ8700_07655 SM00525 NJ8700_07655 NJ8700_07670 SM00382 ATPases associated with a variety of cellular activities NJ8700_07675 SM00342 helix_turn_helix, arabinose operon control protein NJ8700_07730 SM00382 ATPases associated with a variety of cellular activities NJ8700_07740 SM00271 DnaJ molecular chaperone homology domain NJ8700_07795 SM00954 Region found in RelA / SpoT proteins NJ8700_07820 SM00382 ATPases associated with a variety of cellular activities NJ8700_07825 SM00382 ATPases associated with a variety of cellular activities NJ8700_07825 SM00962 SRP54-type protein, GTPase domain NJ8700_07825 SM00963 SRP54-type protein, helical bundle domain NJ8700_07865 SM00382 ATPases associated with a variety of cellular activities NJ8700_07940 SM00883 Chaperonin 10 Kd subunit NJ8700_07965 SM00859 Semialdehyde dehydrogenase, NAD binding domain NJ8700_08000 SM00563 Phosphate acyltransferases NJ8700_08065 SM00825 Beta-ketoacyl synthase NJ8700_08075 SM00822 NJ8700_08075 NJ8700_08080 SM00825 Beta-ketoacyl synthase NJ8700_08085 SM00155 Phospholipase D. Active site motifs. NJ8700_08090 SM00967 RNA 2'-O ribose methyltransferase substrate binding NJ8700_08185 SM00382 ATPases associated with a variety of cellular activities NJ8700_08270 SM00530 Helix-turn-helix XRE-family like proteins NJ8700_08285 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NJ8700_08290 SM00382 ATPases associated with a variety of cellular activities NJ8700_08290 SM01086 C-terminal, D2-small domain, of ClpB protein NJ8700_08345 SM01321 NJ8700_08345 NJ8700_08400 SM01192 NJ8700_08400 NJ8700_08400 SM01193 NJ8700_08400 NJ8700_08405 SM00732 Likely ribonuclease with RNase H fold. NJ8700_08435 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NJ8700_08475 SM00448 cheY-homologous receiver domain NJ8700_08475 SM00862 Transcriptional regulatory protein, C terminal NJ8700_08480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NJ8700_08480 SM00387 Histidine kinase-like ATPases NJ8700_08480 SM00388 His Kinase A (phosphoacceptor) domain NJ8700_08510 SM00382 ATPases associated with a variety of cellular activities NJ8700_08525 SM00420 helix_turn_helix, Deoxyribose operon repressor NJ8700_08525 SM01134 NJ8700_08525 NJ8700_08530 SM00411 bacterial (prokaryotic) histone like domain NJ8700_08550 SM00663 RNA polymerase I subunit A N-terminus NJ8700_08575 SM00649 Ribosomal protein L11/L12 NJ8700_08580 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. NJ8700_08580 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. NJ8700_08595 SM00530 Helix-turn-helix XRE-family like proteins NJ8700_08680 SM00028 Tetratricopeptide repeats NJ8700_08700 SM00533 DNA-binding domain of DNA mismatch repair MUTS family NJ8700_08700 SM00534 ATPase domain of DNA mismatch repair MUTS family NJ8700_08705 SM00487 DEAD-like helicases superfamily NJ8700_08705 SM00490 helicase superfamily c-terminal domain NJ8700_08720 SM00487 DEAD-like helicases superfamily NJ8700_08720 SM00490 helicase superfamily c-terminal domain NJ8700_08790 SM00869 Autotransporter beta-domain NJ8700_09005 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs NJ8700_09005 SM00474 3'-5' exonuclease NJ8700_09005 SM00475 5'-3' exonuclease NJ8700_09005 SM00482 DNA polymerase A domain NJ8700_09050 SM01266 NJ8700_09050 NJ8700_09085 SM01133 NJ8700_09085 NJ8700_09090 SM00420 helix_turn_helix, Deoxyribose operon repressor NJ8700_09090 SM01134 NJ8700_09090 NJ8700_09095 SM00382 ATPases associated with a variety of cellular activities NJ8700_09120 SM00671 Sel1-like repeats. NJ8700_09175 SM00861 Transketolase, pyrimidine binding domain NJ8700_09195 SM00382 ATPases associated with a variety of cellular activities NJ8700_09200 SM00382 ATPases associated with a variety of cellular activities NJ8700_09280 SM00257 Lysin motif NJ8700_09295 SM00422 helix_turn_helix, mercury resistance NJ8700_09390 SM00382 ATPases associated with a variety of cellular activities NJ8700_09395 SM00382 ATPases associated with a variety of cellular activities NJ8700_09405 SM00450 Rhodanese Homology Domain NJ8700_09420 SM00971 Serine acetyltransferase, N-terminal NJ8700_09445 SM01228 NJ8700_09445 NJ8700_09490 SM00382 ATPases associated with a variety of cellular activities NJ8700_09565 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NJ8700_09575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NJ8700_09575 SM00387 Histidine kinase-like ATPases NJ8700_09640 SM01219 NJ8700_09640 NJ8700_09645 SM00341 Helicase and RNase D C-terminal NJ8700_09645 SM00487 DEAD-like helicases superfamily NJ8700_09645 SM00490 helicase superfamily c-terminal domain NJ8700_09645 SM00956 NJ8700_09645 NJ8700_09650 SM00387 Histidine kinase-like ATPases NJ8700_09650 SM00433 TopoisomeraseII NJ8700_09690 SM00382 ATPases associated with a variety of cellular activities NJ8700_09700 SM00062 Bacterial periplasmic substrate-binding proteins NJ8700_09700 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NJ8700_09745 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NJ8700_09745 SM00091 PAS domain NJ8700_09780 SM00506 Appr-1"-p processing enzyme NJ8700_09825 SM01004 Delta-aminolevulinic acid dehydratase NJ8700_09870 SM00363 S4 RNA-binding domain NJ8700_09885 SM00342 helix_turn_helix, arabinose operon control protein NJ8700_09935 SM01350 NJ8700_09935 NJ8700_09970 SM00382 ATPases associated with a variety of cellular activities NJ8700_09970 SM01086 C-terminal, D2-small domain, of ClpB protein NJ8700_09990 SM00855 Phosphoglycerate mutase family NJ8700_10065 SM00382 ATPases associated with a variety of cellular activities NJ8700_10065 SM01086 C-terminal, D2-small domain, of ClpB protein NJ8700_10100 SM00382 ATPases associated with a variety of cellular activities NJ8700_10100 SM00930 NJ8700_10100 NJ8700_10180 SM00226 Low molecular weight phosphatase family NJ8700_10190 SM00729 Elongator protein 3, MiaB family, Radical SAM NJ8700_10220 SM00344 helix_turn_helix ASNC type NJ8700_10260 SM00344 helix_turn_helix ASNC type NJ8700_10265 SM01403 NJ8700_10265 NJ8700_10285 SM01382 NJ8700_10285 NJ8700_10285 SM01383 NJ8700_10285 NJ8700_10300 SM00322 K homology RNA-binding domain NJ8700_10320 SM01374 NJ8700_10320 NJ8700_10325 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. NJ8700_10385 SM00363 S4 RNA-binding domain NJ8700_10385 SM01390 NJ8700_10385 NJ8700_10390 SM00662 RNA polymerases D NJ8700_10425 SM00650 Ribosomal RNA adenine dimethylases NJ8700_10470 SM00957 SecA DEAD-like domain NJ8700_10470 SM00958 SecA preprotein cross-linking domain NJ8700_10485 SM00422 helix_turn_helix, mercury resistance NJ8700_10565 SM00450 Rhodanese Homology Domain NJ8700_10625 SM00100 Cyclic nucleotide-monophosphate binding domain NJ8700_10625 SM00419 helix_turn_helix, cAMP Regulatory protein NJ8700_10670 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain NJ8700_10670 SM01232 NJ8700_10670 NJ8700_10720 SM00487 DEAD-like helicases superfamily NJ8700_10720 SM00490 helicase superfamily c-terminal domain NJ8700_10760 SM01152 NJ8700_10760 NJ8700_10785 SM00363 S4 RNA-binding domain NJ8700_10810 SM01011 Aminopeptidase P, N-terminal domain NJ8700_10865 SM00316 Ribosomal protein S1-like RNA-binding domain NJ8700_10865 SM00357 Cold shock protein domain NJ8700_10865 SM00955 NJ8700_10865 NJ8700_10870 SM00967 RNA 2'-O ribose methyltransferase substrate binding NJ8700_10925 SM00450 Rhodanese Homology Domain NJ8700_10940 SM00420 helix_turn_helix, Deoxyribose operon repressor NJ8700_10940 SM01134 NJ8700_10940 NJ8700_10980 SM00885 D5 N terminal like NJ8700_11020 SM00400 zinc finger NJ8700_11020 SM00493 NJ8700_11020 NJ8700_11020 SM00766 DNA primase DnaG DnaB-binding NJ8700_11050 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NJ8700_11050 SM00292 breast cancer carboxy-terminal domain NJ8700_11050 SM00532 Ligase N family NJ8700_11055 SM00771 ZipA, C-terminal domain (FtsZ-binding) NJ8700_11070 SM00986 Uracil DNA glycosylase superfamily NJ8700_11070 SM00987 UreE urease accessory protein, C-terminal domain NJ8700_11120 SM00904 Riboflavin kinase NJ8700_11155 SM00729 Elongator protein 3, MiaB family, Radical SAM NJ8700_11175 SM00257 Lysin motif NJ8700_11180 SM01207 NJ8700_11180 NJ8700_11185 SM00905 Dihydroneopterin aldolase NJ8700_11190 SM00062 Bacterial periplasmic substrate-binding proteins NJ8700_11210 SM00345 helix_turn_helix gluconate operon transcriptional repressor NJ8700_11235 SM01387 NJ8700_11235 NJ8700_11245 SM00731 SprT homologues.