locus-tag class description AGROH133_02802 PF03618 Kinase/pyrophosphorylase AGROH133_02803 PF02545 Maf-like protein AGROH133_02804 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AGROH133_02804 PF01488 Shikimate / quinate 5-dehydrogenase AGROH133_02804 PF08501 Shikimate dehydrogenase substrate binding domain AGROH133_02805 PF01121 Dephospho-CoA kinase AGROH133_02806 PF00929 Exonuclease AGROH133_02807 PF02556 Preprotein translocase subunit SecB AGROH133_02808 PF04186 FxsA cytoplasmic membrane protein AGROH133_02814 PF03562 MltA specific insert domain AGROH133_02814 PF06725 3D domain AGROH133_02818 PF00204 DNA gyrase B AGROH133_02818 PF00986 DNA gyrase B subunit, carboxyl terminus AGROH133_02818 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_02818 PF01751 Toprim domain AGROH133_02820 PF01557 Fumarylacetoacetate (FAA) hydrolase family AGROH133_02823 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AGROH133_02824 PF00291 Pyridoxal-phosphate dependent enzyme AGROH133_02825 PF00290 Tryptophan synthase alpha chain AGROH133_02826 PF01039 Carboxyl transferase domain AGROH133_02827 PF08245 Mur ligase middle domain AGROH133_02828 PF00085 Thioredoxin AGROH133_02829 PF12705 PD-(D/E)XK nuclease superfamily AGROH133_02829 PF00580 UvrD/REP helicase N-terminal domain AGROH133_02829 PF13361 UvrD-like helicase C-terminal domain AGROH133_02831 PF12804 MobA-like NTP transferase domain AGROH133_02832 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AGROH133_02833 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_02833 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_02835 PF05221 S-adenosyl-L-homocysteine hydrolase AGROH133_02835 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AGROH133_02836 PF00381 PTS HPr component phosphorylation site AGROH133_02837 PF03610 PTS system fructose IIA component AGROH133_02837 PF03830 PTS system sorbose subfamily IIB component AGROH133_02838 PF07475 HPr Serine kinase C-terminal domain AGROH133_02838 PF02603 HPr Serine kinase N terminus AGROH133_02839 PF13756 Stimulus-sensing domain AGROH133_02839 PF00672 HAMP domain AGROH133_02839 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_02839 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_02839 PF13755 Sensor N-terminal transmembrane domain AGROH133_02842 PF00072 Response regulator receiver domain AGROH133_02842 PF00486 Transcriptional regulatory protein, C terminal AGROH133_02844 PF01293 Phosphoenolpyruvate carboxykinase AGROH133_02845 PF00472 RF-1 domain AGROH133_02846 PF04972 BON domain AGROH133_02846 PF01476 LysM domain AGROH133_02847 PF00485 Phosphoribulokinase / Uridine kinase family AGROH133_02848 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AGROH133_02849 PF00977 Histidine biosynthesis protein AGROH133_02850 PF00977 Histidine biosynthesis protein AGROH133_02851 PF00117 Glutamine amidotransferase class-I AGROH133_02856 PF00475 Imidazoleglycerol-phosphate dehydratase AGROH133_02857 PF00227 Proteasome subunit AGROH133_02858 PF10431 C-terminal, D2-small domain, of ClpB protein AGROH133_02858 PF07724 AAA domain (Cdc48 subfamily) AGROH133_02858 PF00004 ATPase family associated with various cellular activities (AAA) AGROH133_02861 PF01274 Malate synthase AGROH133_02865 PF00072 Response regulator receiver domain AGROH133_02867 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_02867 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_02872 PF08482 ATP-dependent helicase C-terminal AGROH133_02872 PF04408 Helicase associated domain (HA2) AGROH133_02872 PF00270 DEAD/DEAH box helicase AGROH133_02872 PF00271 Helicase conserved C-terminal domain AGROH133_02880 PF00271 Helicase conserved C-terminal domain AGROH133_02880 PF09382 RQC domain AGROH133_02880 PF16124 RecQ zinc-binding AGROH133_02880 PF00270 DEAD/DEAH box helicase AGROH133_02880 PF00570 HRDC domain AGROH133_02881 PF00480 ROK family AGROH133_02883 PF13407 Periplasmic binding protein domain AGROH133_02885 PF02653 Branched-chain amino acid transport system / permease component AGROH133_02895 PF00005 ABC transporter AGROH133_02896 PF00485 Phosphoribulokinase / Uridine kinase family AGROH133_02897 PF00462 Glutaredoxin AGROH133_02898 PF07972 NrdI Flavodoxin like AGROH133_02899 PF08343 Ribonucleotide reductase N-terminal AGROH133_02899 PF00317 Ribonucleotide reductase, all-alpha domain AGROH133_02899 PF02867 Ribonucleotide reductase, barrel domain AGROH133_02901 PF00268 Ribonucleotide reductase, small chain AGROH133_02904 PF02463 RecF/RecN/SMC N terminal domain AGROH133_02905 PF00581 Rhodanese-like domain AGROH133_02905 PF00899 ThiF family AGROH133_02907 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AGROH133_02907 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AGROH133_02910 PF00294 pfkB family carbohydrate kinase AGROH133_02921 PF05175 Methyltransferase small domain AGROH133_02921 PF08468 Methyltransferase small domain N-terminal AGROH133_02922 PF00575 S1 RNA binding domain AGROH133_02922 PF01138 3' exoribonuclease family, domain 1 AGROH133_02922 PF03725 3' exoribonuclease family, domain 2 AGROH133_02922 PF00013 KH domain AGROH133_02922 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AGROH133_02923 PF00312 Ribosomal protein S15 AGROH133_02924 PF09157 Pseudouridine synthase II TruB, C-terminal AGROH133_02924 PF16198 tRNA pseudouridylate synthase B C-terminal domain AGROH133_02924 PF01509 TruB family pseudouridylate synthase (N terminal domain) AGROH133_02925 PF02033 Ribosome-binding factor A AGROH133_02926 PF04760 Translation initiation factor IF-2, N-terminal region AGROH133_02926 PF08364 Bacterial translation initiation factor IF-2 associated region AGROH133_02926 PF11987 Translation-initiation factor 2 AGROH133_02926 PF03144 Elongation factor Tu domain 2 AGROH133_02926 PF00009 Elongation factor Tu GTP binding domain AGROH133_02928 PF13184 NusA-like KH domain AGROH133_02928 PF08529 NusA N-terminal domain AGROH133_02928 PF00575 S1 RNA binding domain AGROH133_02929 PF02576 RimP N-terminal domain AGROH133_02929 PF17384 RimP C-terminal SH3 domain AGROH133_02930 PF05977 Transmembrane secretion effector AGROH133_02941 PF13406 Transglycosylase SLT domain AGROH133_02943 PF13662 Toprim domain AGROH133_02943 PF02132 RecR protein AGROH133_02945 PF02575 YbaB/EbfC DNA-binding family AGROH133_02946 PF12169 DNA polymerase III subunits gamma and tau domain III AGROH133_02946 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AGROH133_02946 PF12170 DNA polymerase III tau subunit V interacting with alpha AGROH133_02948 PF00293 NUDIX domain AGROH133_02948 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AGROH133_02948 PF09297 NADH pyrophosphatase zinc ribbon domain AGROH133_02949 PF00800 Prephenate dehydratase AGROH133_02949 PF01817 Chorismate mutase type II AGROH133_02950 PF02348 Cytidylyltransferase AGROH133_02951 PF00034 Cytochrome c AGROH133_02954 PF02397 Bacterial sugar transferase AGROH133_02956 PF00912 Transglycosylase AGROH133_02956 PF00905 Penicillin binding protein transpeptidase domain AGROH133_02958 PF04073 Aminoacyl-tRNA editing domain AGROH133_02961 PF00313 'Cold-shock' DNA-binding domain AGROH133_02962 PF01546 Peptidase family M20/M25/M40 AGROH133_02962 PF07687 Peptidase dimerisation domain AGROH133_02963 PF01047 MarR family AGROH133_02965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AGROH133_02965 PF00476 DNA polymerase family A AGROH133_02965 PF01612 3'-5' exonuclease AGROH133_02965 PF01367 5'-3' exonuclease, C-terminal SAM fold AGROH133_02967 PF01783 Ribosomal L32p protein family AGROH133_02968 PF02743 Cache domain AGROH133_02968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_02968 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_02970 PF02954 Bacterial regulatory protein, Fis family AGROH133_02970 PF00072 Response regulator receiver domain AGROH133_02970 PF00158 Sigma-54 interaction domain AGROH133_02972 PF03401 Tripartite tricarboxylate transporter family receptor AGROH133_02973 PF07331 Tripartite tricarboxylate transporter TctB family AGROH133_02979 PF01970 Tripartite tricarboxylate transporter TctA family AGROH133_02993 PF04102 SlyX AGROH133_02995 PF00226 DnaJ domain AGROH133_02995 PF00684 DnaJ central domain AGROH133_02995 PF01556 DnaJ C terminal domain AGROH133_02996 PF00012 Hsp70 protein AGROH133_03003 PF01625 Peptide methionine sulfoxide reductase AGROH133_03004 PF02608 ABC transporter substrate-binding protein PnrA-like AGROH133_03006 PF00005 ABC transporter AGROH133_03007 PF02653 Branched-chain amino acid transport system / permease component AGROH133_03017 PF02653 Branched-chain amino acid transport system / permease component AGROH133_03025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AGROH133_03026 PF01048 Phosphorylase superfamily AGROH133_03027 PF01791 DeoC/LacD family aldolase AGROH133_03028 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AGROH133_03028 PF00591 Glycosyl transferase family, a/b domain AGROH133_03028 PF02885 Glycosyl transferase family, helical bundle domain AGROH133_03031 PF00962 Adenosine/AMP deaminase AGROH133_03032 PF01676 Metalloenzyme superfamily AGROH133_03036 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AGROH133_03040 PF00510 Cytochrome c oxidase subunit III AGROH133_03046 PF00115 Cytochrome C and Quinol oxidase polypeptide I AGROH133_03061 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AGROH133_03061 PF06481 COX Aromatic Rich Motif AGROH133_03066 PF07690 Major Facilitator Superfamily AGROH133_03066 PF00083 Sugar (and other) transporter AGROH133_03081 PF01645 Conserved region in glutamate synthase AGROH133_03081 PF04898 Glutamate synthase central domain AGROH133_03081 PF00310 Glutamine amidotransferases class-II AGROH133_03081 PF01493 GXGXG motif AGROH133_03082 PF00258 Flavodoxin AGROH133_03082 PF00175 Oxidoreductase NAD-binding domain AGROH133_03082 PF00667 FAD binding domain AGROH133_03088 PF02801 Beta-ketoacyl synthase, C-terminal domain AGROH133_03088 PF00109 Beta-ketoacyl synthase, N-terminal domain AGROH133_03089 PF07977 FabA-like domain AGROH133_03091 PF03458 UPF0126 domain AGROH133_03100 PF06912 Protein of unknown function (DUF1275) AGROH133_03110 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03117 PF00005 ABC transporter AGROH133_03118 PF07702 UTRA domain AGROH133_03118 PF00392 Bacterial regulatory proteins, gntR family AGROH133_03119 PF01618 MotA/TolQ/ExbB proton channel family AGROH133_03125 PF02472 Biopolymer transport protein ExbD/TolR AGROH133_03129 PF02615 Malate/L-lactate dehydrogenase AGROH133_03133 PF00625 Guanylate kinase AGROH133_03134 PF07969 Amidohydrolase family AGROH133_03135 PF06299 Protein of unknown function (DUF1045) AGROH133_03136 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03141 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03149 PF00005 ABC transporter AGROH133_03151 PF00005 ABC transporter AGROH133_03152 PF00005 ABC transporter AGROH133_03153 PF06007 Phosphonate metabolism protein PhnJ AGROH133_03156 PF05861 Bacterial phosphonate metabolism protein (PhnI) AGROH133_03157 PF05845 Bacterial phosphonate metabolism protein (PhnH) AGROH133_03158 PF06754 Phosphonate metabolism protein PhnG AGROH133_03159 PF07702 UTRA domain AGROH133_03159 PF00392 Bacterial regulatory proteins, gntR family AGROH133_03161 PF01113 Dihydrodipicolinate reductase, N-terminus AGROH133_03161 PF05173 Dihydrodipicolinate reductase, C-terminus AGROH133_03162 PF02685 Glucokinase AGROH133_03163 PF02142 MGS-like domain AGROH133_03164 PF03411 Penicillin-insensitive murein endopeptidase AGROH133_03166 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_03168 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03176 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03176 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_03183 PF00005 ABC transporter AGROH133_03183 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_03184 PF01266 FAD dependent oxidoreductase AGROH133_03186 PF00120 Glutamine synthetase, catalytic domain AGROH133_03187 PF01266 FAD dependent oxidoreductase AGROH133_03189 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03196 PF00005 ABC transporter AGROH133_03197 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03209 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AGROH133_03223 PF02082 Transcriptional regulator AGROH133_03225 PF13416 Bacterial extracellular solute-binding protein AGROH133_03228 PF00171 Aldehyde dehydrogenase family AGROH133_03230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_03230 PF03466 LysR substrate binding domain AGROH133_03232 PF00892 EamA-like transporter family AGROH133_03257 PF00877 NlpC/P60 family AGROH133_03260 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AGROH133_03260 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AGROH133_03261 PF00883 Cytosol aminopeptidase family, catalytic domain AGROH133_03261 PF02789 Cytosol aminopeptidase family, N-terminal domain AGROH133_03274 PF00437 Type II/IV secretion system protein AGROH133_03277 PF13629 Pilus formation protein N terminal region AGROH133_03277 PF04972 BON domain AGROH133_03277 PF00263 Bacterial type II and III secretion system protein AGROH133_03300 PF00117 Glutamine amidotransferase class-I AGROH133_03301 PF07411 Domain of unknown function (DUF1508) AGROH133_03302 PF01183 Glycosyl hydrolases family 25 AGROH133_03304 PF00892 EamA-like transporter family AGROH133_03315 PF00392 Bacterial regulatory proteins, gntR family AGROH133_03315 PF00155 Aminotransferase class I and II AGROH133_03322 PF06421 GTP-binding protein LepA C-terminus AGROH133_03322 PF03144 Elongation factor Tu domain 2 AGROH133_03322 PF00009 Elongation factor Tu GTP binding domain AGROH133_03322 PF00679 Elongation factor G C-terminus AGROH133_03323 PF00795 Carbon-nitrogen hydrolase AGROH133_03332 PF02311 AraC-like ligand binding domain AGROH133_03332 PF12833 Helix-turn-helix domain AGROH133_03341 PF03480 Bacterial extracellular solute-binding protein, family 7 AGROH133_03352 PF00707 Translation initiation factor IF-3, C-terminal domain AGROH133_03352 PF05198 Translation initiation factor IF-3, N-terminal domain AGROH133_03353 PF01632 Ribosomal protein L35 AGROH133_03354 PF00453 Ribosomal protein L20 AGROH133_03356 PF01409 tRNA synthetases class II core domain (F) AGROH133_03356 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AGROH133_03357 PF03483 B3/4 domain AGROH133_03357 PF03484 tRNA synthetase B5 domain AGROH133_03357 PF03147 Ferredoxin-fold anticodon binding domain AGROH133_03357 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AGROH133_03357 PF01588 Putative tRNA binding domain AGROH133_03358 PF00248 Aldo/keto reductase family AGROH133_03360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_03360 PF03466 LysR substrate binding domain AGROH133_03363 PF00248 Aldo/keto reductase family AGROH133_03364 PF01965 DJ-1/PfpI family AGROH133_03364 PF12833 Helix-turn-helix domain AGROH133_03367 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_03367 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_03377 PF13742 OB-fold nucleic acid binding domain AGROH133_03377 PF02601 Exonuclease VII, large subunit AGROH133_03378 PF13378 Enolase C-terminal domain-like AGROH133_03378 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AGROH133_03379 PF07729 FCD domain AGROH133_03379 PF00392 Bacterial regulatory proteins, gntR family AGROH133_03380 PF01047 MarR family AGROH133_03381 PF00892 EamA-like transporter family AGROH133_03392 PF02073 Thermophilic metalloprotease (M29) AGROH133_03393 PF04073 Aminoacyl-tRNA editing domain AGROH133_03394 PF03960 ArsC family AGROH133_03398 PF00958 GMP synthase C terminal domain AGROH133_03398 PF00117 Glutamine amidotransferase class-I AGROH133_03401 PF03073 TspO/MBR family AGROH133_03415 PF01029 NusB family AGROH133_03415 PF01189 16S rRNA methyltransferase RsmB/F AGROH133_03416 PF03330 Lytic transglycolase AGROH133_03419 PF08331 Domain of unknown function (DUF1730) AGROH133_03420 PF00043 Glutathione S-transferase, C-terminal domain AGROH133_03420 PF13417 Glutathione S-transferase, N-terminal domain AGROH133_03421 PF02673 Bacitracin resistance protein BacA AGROH133_03434 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AGROH133_03436 PF13649 Methyltransferase domain AGROH133_03437 PF00712 DNA polymerase III beta subunit, N-terminal domain AGROH133_03437 PF02767 DNA polymerase III beta subunit, central domain AGROH133_03437 PF02768 DNA polymerase III beta subunit, C-terminal domain AGROH133_03438 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AGROH133_03439 PF02021 Uncharacterised protein family UPF0102 AGROH133_03440 PF12464 Maltose acetyltransferase AGROH133_03440 PF14602 Hexapeptide repeat of succinyl-transferase AGROH133_03442 PF13416 Bacterial extracellular solute-binding protein AGROH133_03444 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03451 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03458 PF00005 ABC transporter AGROH133_03460 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AGROH133_03460 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AGROH133_03461 PF01078 Magnesium chelatase, subunit ChlI AGROH133_03461 PF13335 Magnesium chelatase, subunit ChlI C-terminal AGROH133_03462 PF00291 Pyridoxal-phosphate dependent enzyme AGROH133_03463 PF01810 LysE type translocator AGROH133_03471 PF00692 dUTPase AGROH133_03472 PF00009 Elongation factor Tu GTP binding domain AGROH133_03472 PF03144 Elongation factor Tu domain 2 AGROH133_03472 PF16658 Class II release factor RF3, C-terminal domain AGROH133_03473 PF04127 DNA / pantothenate metabolism flavoprotein AGROH133_03473 PF02441 Flavoprotein AGROH133_03482 PF03109 ABC1 family AGROH133_03483 PF01209 ubiE/COQ5 methyltransferase family AGROH133_03484 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AGROH133_03484 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AGROH133_03484 PF06827 Zinc finger found in FPG and IleRS AGROH133_03485 PF00378 Enoyl-CoA hydratase/isomerase AGROH133_03486 PF01649 Ribosomal protein S20 AGROH133_03487 PF11638 DnaA N-terminal domain AGROH133_03487 PF00308 Bacterial dnaA protein AGROH133_03487 PF08299 Bacterial dnaA protein helix-turn-helix AGROH133_03488 PF04055 Radical SAM superfamily AGROH133_03488 PF06969 HemN C-terminal domain AGROH133_03489 PF01725 Ham1 family AGROH133_03490 PF01138 3' exoribonuclease family, domain 1 AGROH133_03490 PF03725 3' exoribonuclease family, domain 2 AGROH133_03491 PF01628 HrcA protein C terminal domain AGROH133_03492 PF01025 GrpE AGROH133_03493 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AGROH133_03494 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AGROH133_03494 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AGROH133_03496 PF00309 Sigma-54 factor, Activator interacting domain (AID) AGROH133_03496 PF04963 Sigma-54 factor, core binding domain AGROH133_03496 PF04552 Sigma-54, DNA binding domain AGROH133_03498 PF00005 ABC transporter AGROH133_03499 PF03968 OstA-like protein AGROH133_03503 PF01343 Peptidase family S49 AGROH133_03505 PF00216 Bacterial DNA-binding protein AGROH133_03510 PF02926 THUMP domain AGROH133_03510 PF01170 Putative RNA methylase family UPF0020 AGROH133_03510 PF10672 S-adenosylmethionine-dependent methyltransferase AGROH133_03511 PF08032 RNA 2'-O ribose methyltransferase substrate binding AGROH133_03511 PF00588 SpoU rRNA Methylase family AGROH133_03512 PF01252 Signal peptidase (SPase) II AGROH133_03517 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AGROH133_03517 PF00072 Response regulator receiver domain AGROH133_03517 PF01627 Hpt domain AGROH133_03517 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_03517 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_03517 PF00672 HAMP domain AGROH133_03521 PF05188 MutS domain II AGROH133_03521 PF05192 MutS domain III AGROH133_03521 PF05190 MutS family domain IV AGROH133_03521 PF00488 MutS domain V AGROH133_03521 PF01624 MutS domain I AGROH133_03522 PF01909 Nucleotidyltransferase domain AGROH133_03522 PF01966 HD domain AGROH133_03522 PF08335 GlnD PII-uridylyltransferase AGROH133_03522 PF01842 ACT domain AGROH133_03523 PF03023 Lipid II flippase MurJ AGROH133_03537 PF00579 tRNA synthetases class I (W and Y) AGROH133_03539 PF01106 NifU-like domain AGROH133_03540 PF00814 Glycoprotease family AGROH133_03541 PF00583 Acetyltransferase (GNAT) family AGROH133_03541 PF00814 Glycoprotease family AGROH133_03542 PF01475 Ferric uptake regulator family AGROH133_03543 PF01553 Acyltransferase AGROH133_03545 PF00919 Uncharacterized protein family UPF0004 AGROH133_03545 PF01938 TRAM domain AGROH133_03545 PF04055 Radical SAM superfamily AGROH133_03546 PF02562 PhoH-like protein AGROH133_03547 PF02130 Uncharacterized protein family UPF0054 AGROH133_03548 PF00571 CBS domain AGROH133_03548 PF03471 Transporter associated domain AGROH133_03549 PF00795 Carbon-nitrogen hydrolase AGROH133_03557 PF01381 Helix-turn-helix AGROH133_03559 PF02772 S-adenosylmethionine synthetase, central domain AGROH133_03559 PF02773 S-adenosylmethionine synthetase, C-terminal domain AGROH133_03559 PF00438 S-adenosylmethionine synthetase, N-terminal domain AGROH133_03560 PF02390 Putative methyltransferase AGROH133_03561 PF00294 pfkB family carbohydrate kinase AGROH133_03562 PF02646 RmuC family AGROH133_03565 PF01327 Polypeptide deformylase AGROH133_03566 PF00551 Formyl transferase AGROH133_03566 PF02911 Formyl transferase, C-terminal domain AGROH133_03567 PF01416 tRNA pseudouridine synthase AGROH133_03574 PF07687 Peptidase dimerisation domain AGROH133_03574 PF01546 Peptidase family M20/M25/M40 AGROH133_03575 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AGROH133_03575 PF14602 Hexapeptide repeat of succinyl-transferase AGROH133_03575 PF00132 Bacterial transferase hexapeptide (six repeats) AGROH133_03577 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_03577 PF00672 HAMP domain AGROH133_03580 PF01156 Inosine-uridine preferring nucleoside hydrolase AGROH133_03581 PF00011 Hsp20/alpha crystallin family AGROH133_03596 PF00696 Amino acid kinase family AGROH133_03599 PF01926 50S ribosome-binding GTPase AGROH133_03600 PF02096 60Kd inner membrane protein AGROH133_03600 PF14849 YidC periplasmic domain AGROH133_03606 PF00825 Ribonuclease P AGROH133_03607 PF00468 Ribosomal protein L34 AGROH133_03609 PF00672 HAMP domain AGROH133_03609 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_03613 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_03613 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_03617 PF01209 ubiE/COQ5 methyltransferase family AGROH133_03618 PF00005 ABC transporter AGROH133_03619 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03626 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03636 PF00149 Calcineurin-like phosphoesterase AGROH133_03637 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AGROH133_03637 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AGROH133_03640 PF05544 Proline racemase AGROH133_03641 PF01979 Amidohydrolase family AGROH133_03642 PF00156 Phosphoribosyl transferase domain AGROH133_03643 PF00294 pfkB family carbohydrate kinase AGROH133_03646 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AGROH133_03646 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AGROH133_03647 PF00342 Phosphoglucose isomerase AGROH133_03649 PF00501 AMP-binding enzyme AGROH133_03649 PF13193 AMP-binding enzyme C-terminal domain AGROH133_03650 PF08402 TOBE domain AGROH133_03650 PF00005 ABC transporter AGROH133_03653 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03666 PF07715 TonB-dependent Receptor Plug Domain AGROH133_03666 PF00593 TonB dependent receptor AGROH133_03675 PF01679 Proteolipid membrane potential modulator AGROH133_03682 PF03976 Polyphosphate kinase 2 (PPK2) AGROH133_03683 PF16736 Single Cache-like AGROH133_03683 PF00989 PAS fold AGROH133_03683 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_03683 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_03685 PF12849 PBP superfamily domain AGROH133_03687 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03697 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_03704 PF00005 ABC transporter AGROH133_03705 PF01895 PhoU domain AGROH133_03706 PF00486 Transcriptional regulatory protein, C terminal AGROH133_03706 PF00072 Response regulator receiver domain AGROH133_03709 PF00202 Aminotransferase class-III AGROH133_03710 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AGROH133_03710 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AGROH133_03711 PF01430 Hsp33 protein AGROH133_03712 PF04379 ApaG domain AGROH133_03713 PF01053 Cys/Met metabolism PLP-dependent enzyme AGROH133_03714 PF00692 dUTPase AGROH133_03716 PF00230 Major intrinsic protein AGROH133_03759 PF00196 Bacterial regulatory proteins, luxR family AGROH133_03759 PF00072 Response regulator receiver domain AGROH133_03762 PF01180 Dihydroorotate dehydrogenase AGROH133_03767 PF08241 Methyltransferase domain AGROH133_03783 PF02082 Transcriptional regulator AGROH133_03785 PF08494 DEAD/H associated AGROH133_03785 PF00271 Helicase conserved C-terminal domain AGROH133_03785 PF00270 DEAD/DEAH box helicase AGROH133_03791 PF01925 Sulfite exporter TauE/SafE AGROH133_03802 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AGROH133_03802 PF12806 Acetyl-CoA dehydrogenase C-terminal like AGROH133_03802 PF02770 Acyl-CoA dehydrogenase, middle domain AGROH133_03802 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AGROH133_03803 PF02803 Thiolase, C-terminal domain AGROH133_03803 PF00108 Thiolase, N-terminal domain AGROH133_03804 PF00378 Enoyl-CoA hydratase/isomerase AGROH133_03804 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AGROH133_03804 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AGROH133_03808 PF03334 Na+/H+ antiporter subunit AGROH133_03813 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AGROH133_03817 PF01899 Na+/H+ ion antiporter subunit AGROH133_03821 PF00361 Proton-conducting membrane transporter AGROH133_03837 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AGROH133_03841 PF00361 Proton-conducting membrane transporter AGROH133_03841 PF13244 Domain of unknown function (DUF4040) AGROH133_03841 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AGROH133_03841 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AGROH133_03870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_03872 PF00072 Response regulator receiver domain AGROH133_03873 PF01584 CheW-like domain AGROH133_03873 PF02895 Signal transducing histidine kinase, homodimeric domain AGROH133_03873 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_03873 PF01627 Hpt domain AGROH133_03874 PF03705 CheR methyltransferase, all-alpha domain AGROH133_03874 PF01739 CheR methyltransferase, SAM binding domain AGROH133_03875 PF00072 Response regulator receiver domain AGROH133_03875 PF01339 CheB methylesterase AGROH133_03876 PF00072 Response regulator receiver domain AGROH133_03877 PF03975 CheD chemotactic sensory transduction AGROH133_03879 PF01514 Secretory protein of YscJ/FliF family AGROH133_03879 PF08345 Flagellar M-ring protein C-terminal AGROH133_03882 PF03472 Autoinducer binding domain AGROH133_03882 PF00196 Bacterial regulatory proteins, luxR family AGROH133_03886 PF00672 HAMP domain AGROH133_03886 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_03892 PF00072 Response regulator receiver domain AGROH133_03892 PF00672 HAMP domain AGROH133_03892 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_03892 PF01627 Hpt domain AGROH133_03892 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_03907 PF01741 Large-conductance mechanosensitive channel, MscL AGROH133_03911 PF00155 Aminotransferase class I and II AGROH133_03912 PF01370 NAD dependent epimerase/dehydratase family AGROH133_03916 PF03884 DNA gyrase inhibitor YacG AGROH133_03917 PF02545 Maf-like protein AGROH133_03918 PF01176 Translation initiation factor 1A / IF-1 AGROH133_03920 PF06793 Uncharacterised protein family (UPF0262) AGROH133_03921 PF00815 Histidinol dehydrogenase AGROH133_03923 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AGROH133_03926 PF00669 Bacterial flagellin N-terminal helical region AGROH133_03926 PF00700 Bacterial flagellin C-terminal helical region AGROH133_03927 PF00669 Bacterial flagellin N-terminal helical region AGROH133_03927 PF00700 Bacterial flagellin C-terminal helical region AGROH133_03928 PF00813 FliP family AGROH133_03936 PF02107 Flagellar L-ring protein AGROH133_03941 PF02119 Flagellar P-ring protein AGROH133_03943 PF13144 Chaperone for flagella basal body P-ring formation AGROH133_03946 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AGROH133_03946 PF00460 Flagella basal body rod protein AGROH133_03947 PF02049 Flagellar hook-basal body complex protein FliE AGROH133_03948 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AGROH133_03949 PF00460 Flagella basal body rod protein AGROH133_03952 PF18269 T3SS EscN ATPase C-terminal domain AGROH133_03952 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AGROH133_03953 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AGROH133_03953 PF00460 Flagella basal body rod protein AGROH133_03955 PF01618 MotA/TolQ/ExbB proton channel family AGROH133_03960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AGROH133_03961 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AGROH133_03962 PF14842 FliG N-terminal domain AGROH133_03962 PF01706 FliG C-terminal domain AGROH133_03962 PF14841 FliG middle domain AGROH133_03963 PF01312 FlhB HrpN YscU SpaS Family AGROH133_03970 PF00700 Bacterial flagellin C-terminal helical region AGROH133_03970 PF00669 Bacterial flagellin N-terminal helical region AGROH133_03972 PF13677 Membrane MotB of proton-channel complex MotA/MotB AGROH133_03972 PF00691 OmpA family AGROH133_03976 PF02120 Flagellar hook-length control protein FliK AGROH133_03979 PF00486 Transcriptional regulatory protein, C terminal AGROH133_03982 PF07559 Flagellar basal body protein FlaE AGROH133_03982 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AGROH133_03982 PF00460 Flagella basal body rod protein AGROH133_03986 PF07378 Flagellar protein FlbT AGROH133_03987 PF03963 Flagellar hook capping protein - N-terminal region AGROH133_03988 PF01313 Bacterial export proteins, family 3 AGROH133_03991 PF00771 FHIPEP family AGROH133_03998 PF01311 Bacterial export proteins, family 1 AGROH133_04015 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AGROH133_04015 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AGROH133_04016 PF00356 Bacterial regulatory proteins, lacI family AGROH133_04018 PF01547 Bacterial extracellular solute-binding protein AGROH133_04020 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_04028 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_04036 PF00128 Alpha amylase, catalytic domain AGROH133_04037 PF00005 ABC transporter AGROH133_04037 PF17912 MalK OB fold domain AGROH133_04037 PF03459 TOBE domain AGROH133_04041 PF00920 Dehydratase family AGROH133_04042 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AGROH133_04043 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AGROH133_04043 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AGROH133_04045 PF01266 FAD dependent oxidoreductase AGROH133_04046 PF00120 Glutamine synthetase, catalytic domain AGROH133_04052 PF00463 Isocitrate lyase family AGROH133_04053 PF06114 IrrE N-terminal-like domain AGROH133_04053 PF09856 Predicted transcriptional regulator (DUF2083) AGROH133_04053 PF01381 Helix-turn-helix AGROH133_04055 PF13416 Bacterial extracellular solute-binding protein AGROH133_04057 PF00005 ABC transporter AGROH133_04057 PF08402 TOBE domain AGROH133_04058 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_04065 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_04086 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_04086 PF00989 PAS fold AGROH133_04086 PF13188 PAS domain AGROH133_04086 PF13426 PAS domain AGROH133_04086 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_04088 PF02541 Ppx/GppA phosphatase family AGROH133_04089 PF01728 FtsJ-like methyltransferase AGROH133_04090 PF07690 Major Facilitator Superfamily AGROH133_04105 PF00753 Metallo-beta-lactamase superfamily AGROH133_04107 PF00571 CBS domain AGROH133_04107 PF00478 IMP dehydrogenase / GMP reductase domain AGROH133_04112 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_04112 PF00107 Zinc-binding dehydrogenase AGROH133_04113 PF01738 Dienelactone hydrolase family AGROH133_04114 PF00994 Probable molybdopterin binding domain AGROH133_04115 PF08544 GHMP kinases C terminal AGROH133_04115 PF00288 GHMP kinases N terminal domain AGROH133_04119 PF00348 Polyprenyl synthetase AGROH133_04122 PF06965 Na+/H+ antiporter 1 AGROH133_04122 PF01343 Peptidase family S49 AGROH133_04125 PF02091 Glycyl-tRNA synthetase alpha subunit AGROH133_04126 PF04011 LemA family AGROH133_04128 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AGROH133_04136 PF05746 DALR anticodon binding domain AGROH133_04136 PF02092 Glycyl-tRNA synthetase beta subunit AGROH133_04137 PF04463 Protein of unknown function (DUF523) AGROH133_04138 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_04138 PF00672 HAMP domain AGROH133_04145 PF02843 Phosphoribosylglycinamide synthetase, C domain AGROH133_04145 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AGROH133_04145 PF02844 Phosphoribosylglycinamide synthetase, N domain AGROH133_04146 PF00575 S1 RNA binding domain AGROH133_04146 PF09371 Tex-like protein N-terminal domain AGROH133_04146 PF16921 Tex protein YqgF-like domain AGROH133_04146 PF17674 HHH domain AGROH133_04150 PF01040 UbiA prenyltransferase family AGROH133_04161 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_04161 PF03466 LysR substrate binding domain AGROH133_04164 PF04107 Glutamate-cysteine ligase family 2(GCS2) AGROH133_04165 PF04452 RNA methyltransferase AGROH133_04166 PF01384 Phosphate transporter family AGROH133_04181 PF05116 Sucrose-6F-phosphate phosphohydrolase AGROH133_04182 PF13439 Glycosyltransferase Family 4 AGROH133_04182 PF00534 Glycosyl transferases group 1 AGROH133_04183 PF00392 Bacterial regulatory proteins, gntR family AGROH133_04183 PF07729 FCD domain AGROH133_04188 PF03466 LysR substrate binding domain AGROH133_04188 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_04190 PF02913 FAD linked oxidases, C-terminal domain AGROH133_04190 PF01565 FAD binding domain AGROH133_04191 PF01565 FAD binding domain AGROH133_04192 PF02754 Cysteine-rich domain AGROH133_04192 PF13183 4Fe-4S dicluster domain AGROH133_04195 PF17969 L,D-transpeptidase C-terminal domain AGROH133_04195 PF03734 L,D-transpeptidase catalytic domain AGROH133_04197 PF03352 Methyladenine glycosylase AGROH133_04200 PF03601 Conserved hypothetical protein 698 AGROH133_04212 PF03466 LysR substrate binding domain AGROH133_04212 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_04217 PF03129 Anticodon binding domain AGROH133_04217 PF13393 Histidyl-tRNA synthetase AGROH133_04219 PF13393 Histidyl-tRNA synthetase AGROH133_04220 PF01634 ATP phosphoribosyltransferase AGROH133_04221 PF07681 DoxX AGROH133_04227 PF00118 TCP-1/cpn60 chaperonin family AGROH133_04228 PF00166 Chaperonin 10 Kd subunit AGROH133_04230 PF01687 Riboflavin kinase AGROH133_04230 PF06574 FAD synthetase AGROH133_04232 PF00133 tRNA synthetases class I (I, L, M and V) AGROH133_04232 PF08264 Anticodon-binding domain of tRNA AGROH133_04234 PF14437 MafB19-like deaminase AGROH133_04235 PF00849 RNA pseudouridylate synthase AGROH133_04235 PF01479 S4 domain AGROH133_04237 PF01734 Patatin-like phospholipase AGROH133_04238 PF00999 Sodium/hydrogen exchanger family AGROH133_04238 PF02254 TrkA-N domain AGROH133_04251 PF01523 Putative modulator of DNA gyrase AGROH133_04255 PF00534 Glycosyl transferases group 1 AGROH133_04255 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AGROH133_04257 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AGROH133_04261 PF08676 MutL C terminal dimerisation domain AGROH133_04261 PF01119 DNA mismatch repair protein, C-terminal domain AGROH133_04262 PF00989 PAS fold AGROH133_04262 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_04262 PF01627 Hpt domain AGROH133_04262 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_04262 PF00072 Response regulator receiver domain AGROH133_04262 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_04263 PF00563 EAL domain AGROH133_04263 PF13188 PAS domain AGROH133_04263 PF03707 Bacterial signalling protein N terminal repeat AGROH133_04263 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_04264 PF08450 SMP-30/Gluconolactonase/LRE-like region AGROH133_04265 PF01081 KDPG and KHG aldolase AGROH133_04266 PF05035 2-keto-3-deoxy-galactonokinase AGROH133_04270 PF03472 Autoinducer binding domain AGROH133_04270 PF00196 Bacterial regulatory proteins, luxR family AGROH133_04274 PF10609 NUBPL iron-transfer P-loop NTPase AGROH133_04275 PF01544 CorA-like Mg2+ transporter protein AGROH133_04278 PF02705 K+ potassium transporter AGROH133_04294 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter AGROH133_04297 PF00119 ATP synthase A chain AGROH133_04304 PF00137 ATP synthase subunit C AGROH133_04307 PF00430 ATP synthase B/B' CF(0) AGROH133_04309 PF00430 ATP synthase B/B' CF(0) AGROH133_04318 PF01351 Ribonuclease HII AGROH133_04321 PF01565 FAD binding domain AGROH133_04321 PF02913 FAD linked oxidases, C-terminal domain AGROH133_04322 PF01300 Telomere recombination AGROH133_04322 PF03481 Putative GTP-binding controlling metal-binding AGROH133_04325 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AGROH133_04325 PF00355 Rieske [2Fe-2S] domain AGROH133_04326 PF00175 Oxidoreductase NAD-binding domain AGROH133_04326 PF00970 Oxidoreductase FAD-binding domain AGROH133_04326 PF00111 2Fe-2S iron-sulfur cluster binding domain AGROH133_04327 PF07886 BA14K-like protein AGROH133_04330 PF07886 BA14K-like protein AGROH133_04337 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AGROH133_04337 PF12806 Acetyl-CoA dehydrogenase C-terminal like AGROH133_04337 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AGROH133_04337 PF02770 Acyl-CoA dehydrogenase, middle domain AGROH133_04341 PF05958 tRNA (Uracil-5-)-methyltransferase AGROH133_04342 PF01479 S4 domain AGROH133_04342 PF01728 FtsJ-like methyltransferase AGROH133_04343 PF00672 HAMP domain AGROH133_04343 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_04351 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AGROH133_04351 PF02779 Transketolase, pyrimidine binding domain AGROH133_04351 PF02780 Transketolase, C-terminal domain AGROH133_04352 PF02678 Pirin AGROH133_04352 PF05726 Pirin C-terminal cupin domain AGROH133_04353 PF02609 Exonuclease VII small subunit AGROH133_04354 PF00850 Histone deacetylase domain AGROH133_04355 PF02632 BioY family AGROH133_04361 PF02632 BioY family AGROH133_04362 PF02361 Cobalt transport protein AGROH133_04366 PF00005 ABC transporter AGROH133_04367 PF06224 Winged helix DNA-binding domain AGROH133_04368 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AGROH133_04368 PF00925 GTP cyclohydrolase II AGROH133_04369 PF01264 Chorismate synthase AGROH133_04372 PF00300 Histidine phosphatase superfamily (branch 1) AGROH133_04374 PF00684 DnaJ central domain AGROH133_04374 PF01556 DnaJ C terminal domain AGROH133_04374 PF00226 DnaJ domain AGROH133_04376 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AGROH133_04376 PF01243 Pyridoxamine 5'-phosphate oxidase AGROH133_04387 PF13419 Haloacid dehalogenase-like hydrolase AGROH133_04389 PF01523 Putative modulator of DNA gyrase AGROH133_04391 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AGROH133_04391 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AGROH133_04396 PF00115 Cytochrome C and Quinol oxidase polypeptide I AGROH133_04409 PF01040 UbiA prenyltransferase family AGROH133_04421 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AGROH133_04423 PF00510 Cytochrome c oxidase subunit III AGROH133_04434 PF02104 SURF1 family AGROH133_04437 PF02401 LytB protein AGROH133_04438 PF01636 Phosphotransferase enzyme family AGROH133_04439 PF00075 RNase H AGROH133_04444 PF08534 Redoxin AGROH133_04444 PF00462 Glutaredoxin AGROH133_04447 PF02622 Uncharacterized ACR, COG1678 AGROH133_04449 PF15887 Putative zinc-binding metallo-peptidase AGROH133_04449 PF10005 zinc-ribbon domain AGROH133_04450 PF00563 EAL domain AGROH133_04450 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_04450 PF13185 GAF domain AGROH133_04460 PF13302 Acetyltransferase (GNAT) domain AGROH133_04461 PF05193 Peptidase M16 inactive domain AGROH133_04461 PF00675 Insulinase (Peptidase family M16) AGROH133_04462 PF14821 Threonine synthase N terminus AGROH133_04462 PF00291 Pyridoxal-phosphate dependent enzyme AGROH133_04466 PF13419 Haloacid dehalogenase-like hydrolase AGROH133_04471 PF18755 Restriction Enzyme Adenine Methylase Associated AGROH133_04471 PF01555 DNA methylase AGROH133_04473 PF14815 NUDIX domain AGROH133_04473 PF00730 HhH-GPD superfamily base excision DNA repair protein AGROH133_04475 PF13462 Thioredoxin AGROH133_04478 PF02463 RecF/RecN/SMC N terminal domain AGROH133_04479 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AGROH133_04481 PF00391 PEP-utilising enzyme, mobile domain AGROH133_04481 PF02896 PEP-utilising enzyme, TIM barrel domain AGROH133_04481 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AGROH133_04487 PF00375 Sodium:dicarboxylate symporter family AGROH133_04503 PF06039 Malate:quinone oxidoreductase (Mqo) AGROH133_04511 PF00009 Elongation factor Tu GTP binding domain AGROH133_04512 PF01507 Phosphoadenosine phosphosulfate reductase family AGROH133_04513 PF01507 Phosphoadenosine phosphosulfate reductase family AGROH133_04514 PF02082 Transcriptional regulator AGROH133_04518 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_04526 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_04532 PF12857 TOBE-like domain AGROH133_04532 PF00005 ABC transporter AGROH133_04533 PF00550 Phosphopantetheine attachment site AGROH133_04533 PF00698 Acyl transferase domain AGROH133_04533 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_04533 PF00107 Zinc-binding dehydrogenase AGROH133_04533 PF16197 Ketoacyl-synthetase C-terminal extension AGROH133_04533 PF00109 Beta-ketoacyl synthase, N-terminal domain AGROH133_04533 PF02801 Beta-ketoacyl synthase, C-terminal domain AGROH133_04533 PF08659 KR domain AGROH133_04533 PF14765 Polyketide synthase dehydratase AGROH133_04534 PF00563 EAL domain AGROH133_04534 PF00989 PAS fold AGROH133_04534 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_04534 PF01590 GAF domain AGROH133_04536 PF00440 Bacterial regulatory proteins, tetR family AGROH133_04536 PF13977 BetI-type transcriptional repressor, C-terminal AGROH133_04538 PF00171 Aldehyde dehydrogenase family AGROH133_04539 PF00732 GMC oxidoreductase AGROH133_04539 PF05199 GMC oxidoreductase AGROH133_04542 PF00654 Voltage gated chloride channel AGROH133_04561 PF07690 Major Facilitator Superfamily AGROH133_04577 PF04679 ATP dependent DNA ligase C terminal region AGROH133_04577 PF04675 DNA ligase N terminus AGROH133_04577 PF01068 ATP dependent DNA ligase domain AGROH133_04580 PF00403 Heavy-metal-associated domain AGROH133_04588 PF03734 L,D-transpeptidase catalytic domain AGROH133_04588 PF17969 L,D-transpeptidase C-terminal domain AGROH133_04590 PF03734 L,D-transpeptidase catalytic domain AGROH133_04590 PF17969 L,D-transpeptidase C-terminal domain AGROH133_04592 PF01047 MarR family AGROH133_04593 PF02566 OsmC-like protein AGROH133_04597 PF00005 ABC transporter AGROH133_04597 PF16326 ABC transporter C-terminal domain AGROH133_04597 PF12848 ABC transporter AGROH133_04603 PF03466 LysR substrate binding domain AGROH133_04603 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_04605 PF00106 short chain dehydrogenase AGROH133_04608 PF05872 Bacterial protein of unknown function (DUF853) AGROH133_04611 PF01638 HxlR-like helix-turn-helix AGROH133_04612 PF00106 short chain dehydrogenase AGROH133_04613 PF12833 Helix-turn-helix domain AGROH133_04615 PF01810 LysE type translocator AGROH133_04621 PF00248 Aldo/keto reductase family AGROH133_04622 PF08279 HTH domain AGROH133_04622 PF13280 WYL domain AGROH133_04626 PF01063 Amino-transferase class IV AGROH133_04627 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_04627 PF00672 HAMP domain AGROH133_04630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_04630 PF03466 LysR substrate binding domain AGROH133_04635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AGROH133_04635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AGROH133_04639 PF01810 LysE type translocator AGROH133_04645 PF01322 Cytochrome C' AGROH133_04648 PF00034 Cytochrome c AGROH133_04663 PF09278 MerR, DNA binding AGROH133_04663 PF00376 MerR family regulatory protein AGROH133_04666 PF02583 Metal-sensitive transcriptional repressor AGROH133_04675 PF00005 ABC transporter AGROH133_04675 PF00571 CBS domain AGROH133_04676 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_04686 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AGROH133_04686 PF00326 Prolyl oligopeptidase family AGROH133_04689 PF00701 Dihydrodipicolinate synthetase family AGROH133_04692 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AGROH133_04692 PF12833 Helix-turn-helix domain AGROH133_04692 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AGROH133_04692 PF02805 Metal binding domain of Ada AGROH133_04693 PF01594 AI-2E family transporter AGROH133_04703 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AGROH133_04706 PF03006 Haemolysin-III related AGROH133_04715 PF01810 LysE type translocator AGROH133_04721 PF01641 SelR domain AGROH133_04722 PF00361 Proton-conducting membrane transporter AGROH133_04722 PF13244 Domain of unknown function (DUF4040) AGROH133_04722 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AGROH133_04742 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AGROH133_04747 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AGROH133_04751 PF00361 Proton-conducting membrane transporter AGROH133_04752 PF01899 Na+/H+ ion antiporter subunit AGROH133_04756 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AGROH133_04760 PF03334 Na+/H+ antiporter subunit AGROH133_04765 PF05443 ROS/MUCR transcriptional regulator protein AGROH133_04768 PF02657 Fe-S metabolism associated domain AGROH133_04769 PF17264 Family of unknown function (DUF5330) AGROH133_04771 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_04771 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_04785 PF01546 Peptidase family M20/M25/M40 AGROH133_04785 PF07687 Peptidase dimerisation domain AGROH133_04786 PF01810 LysE type translocator AGROH133_04792 PF03466 LysR substrate binding domain AGROH133_04792 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_04794 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AGROH133_04795 PF00905 Penicillin binding protein transpeptidase domain AGROH133_04795 PF00912 Transglycosylase AGROH133_04799 PF03692 Putative zinc- or iron-chelating domain AGROH133_04800 PF00905 Penicillin binding protein transpeptidase domain AGROH133_04803 PF00376 MerR family regulatory protein AGROH133_04803 PF09278 MerR, DNA binding AGROH133_04823 PF08244 Glycosyl hydrolases family 32 C terminal AGROH133_04823 PF00251 Glycosyl hydrolases family 32 N-terminal domain AGROH133_04824 PF07536 HWE histidine kinase AGROH133_04824 PF08447 PAS fold AGROH133_04824 PF13426 PAS domain AGROH133_04825 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AGROH133_04827 PF01037 Lrp/AsnC ligand binding domain AGROH133_04827 PF13404 AsnC-type helix-turn-helix domain AGROH133_04840 PF04860 Phage portal protein AGROH133_04874 PF00072 Response regulator receiver domain AGROH133_04874 PF00486 Transcriptional regulatory protein, C terminal AGROH133_04875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_04884 PF03100 CcmE AGROH133_04887 PF01578 Cytochrome C assembly protein AGROH133_04887 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AGROH133_04903 PF03918 Cytochrome C biogenesis protein AGROH133_04907 PF13180 PDZ domain AGROH133_04910 PF00072 Response regulator receiver domain AGROH133_04910 PF00486 Transcriptional regulatory protein, C terminal AGROH133_04911 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_04911 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_04911 PF08448 PAS fold AGROH133_04911 PF13426 PAS domain AGROH133_04911 PF00072 Response regulator receiver domain AGROH133_04915 PF04134 Protein of unknown function, DUF393 AGROH133_04917 PF03710 Glutamate-ammonia ligase adenylyltransferase AGROH133_04917 PF08335 GlnD PII-uridylyltransferase AGROH133_04918 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_04918 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_04918 PF00989 PAS fold AGROH133_04922 PF11940 Domain of unknown function (DUF3458) Ig-like fold AGROH133_04922 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AGROH133_04922 PF01433 Peptidase family M1 domain AGROH133_04936 PF00012 Hsp70 protein AGROH133_04937 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_04953 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_04953 PF00107 Zinc-binding dehydrogenase AGROH133_04954 PF01638 HxlR-like helix-turn-helix AGROH133_04955 PF02673 Bacitracin resistance protein BacA AGROH133_04964 PF03448 MgtE intracellular N domain AGROH133_04964 PF00571 CBS domain AGROH133_04964 PF01769 Divalent cation transporter AGROH133_04968 PF07690 Major Facilitator Superfamily AGROH133_04981 PF00781 Diacylglycerol kinase catalytic domain AGROH133_04982 PF00202 Aminotransferase class-III AGROH133_04985 PF09957 Bacterial antitoxin of type II TA system, VapB AGROH133_04986 PF01048 Phosphorylase superfamily AGROH133_04986 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AGROH133_04997 PF00155 Aminotransferase class I and II AGROH133_05000 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_05000 PF14759 Reductase C-terminal AGROH133_05001 PF03328 HpcH/HpaI aldolase/citrate lyase family AGROH133_05007 PF02530 Porin subfamily AGROH133_05009 PF02530 Porin subfamily AGROH133_05011 PF01464 Transglycosylase SLT domain AGROH133_05011 PF14718 Soluble lytic murein transglycosylase L domain AGROH133_05014 PF00701 Dihydrodipicolinate synthetase family AGROH133_05015 PF01668 SmpB protein AGROH133_05016 PF00672 HAMP domain AGROH133_05016 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_05018 PF01192 RNA polymerase Rpb6 AGROH133_05019 PF02824 TGS domain AGROH133_05019 PF04607 Region found in RelA / SpoT proteins AGROH133_05019 PF13291 ACT domain AGROH133_05025 PF01648 4'-phosphopantetheinyl transferase superfamily AGROH133_05026 PF10502 Signal peptidase, peptidase S26 AGROH133_05028 PF00035 Double-stranded RNA binding motif AGROH133_05028 PF14622 Ribonuclease-III-like AGROH133_05029 PF07650 KH domain AGROH133_05029 PF01926 50S ribosome-binding GTPase AGROH133_05030 PF00027 Cyclic nucleotide-binding domain AGROH133_05030 PF13545 Crp-like helix-turn-helix domain AGROH133_05032 PF00072 Response regulator receiver domain AGROH133_05033 PF02565 Recombination protein O C terminal AGROH133_05033 PF11967 Recombination protein O N terminal AGROH133_05034 PF07690 Major Facilitator Superfamily AGROH133_05047 PF08241 Methyltransferase domain AGROH133_05049 PF01966 HD domain AGROH133_05078 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AGROH133_05082 PF00005 ABC transporter AGROH133_05083 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_05090 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AGROH133_05092 PF00924 Mechanosensitive ion channel AGROH133_05092 PF05552 Conserved TM helix AGROH133_05097 PF01966 HD domain AGROH133_05098 PF01571 Aminomethyltransferase folate-binding domain AGROH133_05105 PF03099 Biotin/lipoate A/B protein ligase family AGROH133_05105 PF00293 NUDIX domain AGROH133_05106 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AGROH133_05112 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_05112 PF00072 Response regulator receiver domain AGROH133_05114 PF01066 CDP-alcohol phosphatidyltransferase AGROH133_05123 PF02666 Phosphatidylserine decarboxylase AGROH133_05125 PF00005 ABC transporter AGROH133_05125 PF00664 ABC transporter transmembrane region AGROH133_05135 PF03641 Possible lysine decarboxylase AGROH133_05136 PF03717 Penicillin-binding Protein dimerisation domain AGROH133_05136 PF00905 Penicillin binding protein transpeptidase domain AGROH133_05138 PF00892 EamA-like transporter family AGROH133_05149 PF00561 alpha/beta hydrolase fold AGROH133_05153 PF04480 Protein of unknown function (DUF559) AGROH133_05154 PF09190 DALR domain AGROH133_05154 PF01406 tRNA synthetases class I (C) catalytic domain AGROH133_05155 PF00106 short chain dehydrogenase AGROH133_05156 PF00156 Phosphoribosyl transferase domain AGROH133_05156 PF13537 Glutamine amidotransferase domain AGROH133_05157 PF02674 Colicin V production protein AGROH133_05162 PF06745 KaiC AGROH133_05162 PF18073 Rubredoxin metal binding domain AGROH133_05164 PF00842 Alanine racemase, C-terminal domain AGROH133_05164 PF01168 Alanine racemase, N-terminal domain AGROH133_05165 PF12852 Cupin AGROH133_05165 PF12833 Helix-turn-helix domain AGROH133_05167 PF03591 AzlC protein AGROH133_05178 PF03796 DnaB-like helicase C terminal domain AGROH133_05178 PF00772 DnaB-like helicase N terminal domain AGROH133_05180 PF01047 MarR family AGROH133_05197 PF13533 Biotin-lipoyl like AGROH133_05200 PF03948 Ribosomal protein L9, C-terminal domain AGROH133_05200 PF01281 Ribosomal protein L9, N-terminal domain AGROH133_05209 PF01084 Ribosomal protein S18 AGROH133_05210 PF01250 Ribosomal protein S6 AGROH133_05212 PF00248 Aldo/keto reductase family AGROH133_05213 PF00698 Acyl transferase domain AGROH133_05215 PF00550 Phosphopantetheine attachment site AGROH133_05216 PF00109 Beta-ketoacyl synthase, N-terminal domain AGROH133_05216 PF02801 Beta-ketoacyl synthase, C-terminal domain AGROH133_05218 PF02618 YceG-like family AGROH133_05220 PF08340 Domain of unknown function (DUF1732) AGROH133_05220 PF03755 YicC-like family, N-terminal region AGROH133_05221 PF00625 Guanylate kinase AGROH133_05223 PF00398 Ribosomal RNA adenine dimethylase AGROH133_05224 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AGROH133_05228 PF04453 LPS transport system D AGROH133_05228 PF03968 OstA-like protein AGROH133_05245 PF00883 Cytosol aminopeptidase family, catalytic domain AGROH133_05245 PF02789 Cytosol aminopeptidase family, N-terminal domain AGROH133_05247 PF00563 EAL domain AGROH133_05247 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_05247 PF03707 Bacterial signalling protein N terminal repeat AGROH133_05248 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_05249 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_05249 PF00563 EAL domain AGROH133_05249 PF13185 GAF domain AGROH133_05256 PF00005 ABC transporter AGROH133_05256 PF12848 ABC transporter AGROH133_05258 PF13417 Glutathione S-transferase, N-terminal domain AGROH133_05259 PF00334 Nucleoside diphosphate kinase AGROH133_05271 PF02391 MoaE protein AGROH133_05273 PF01066 CDP-alcohol phosphatidyltransferase AGROH133_05277 PF08459 UvrC Helix-hairpin-helix N-terminal AGROH133_05277 PF01541 GIY-YIG catalytic domain AGROH133_05277 PF02151 UvrB/uvrC motif AGROH133_05279 PF13505 Outer membrane protein beta-barrel domain AGROH133_05281 PF13417 Glutathione S-transferase, N-terminal domain AGROH133_05281 PF00043 Glutathione S-transferase, C-terminal domain AGROH133_05282 PF00445 Ribonuclease T2 family AGROH133_05293 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AGROH133_05294 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AGROH133_05294 PF00384 Molybdopterin oxidoreductase AGROH133_05294 PF01568 Molydopterin dinucleotide binding domain AGROH133_05295 PF00293 NUDIX domain AGROH133_05296 PF00293 NUDIX domain AGROH133_05299 PF00551 Formyl transferase AGROH133_05300 PF02769 AIR synthase related protein, C-terminal domain AGROH133_05300 PF00586 AIR synthase related protein, N-terminal domain AGROH133_05301 PF01594 AI-2E family transporter AGROH133_05311 PF13089 Polyphosphate kinase N-terminal domain AGROH133_05311 PF02503 Polyphosphate kinase middle domain AGROH133_05311 PF13090 Polyphosphate kinase C-terminal domain 2 AGROH133_05311 PF17941 Polyphosphate kinase C-terminal domain 1 AGROH133_05312 PF02541 Ppx/GppA phosphatase family AGROH133_05313 PF00132 Bacterial transferase hexapeptide (six repeats) AGROH133_05318 PF00211 Adenylate and Guanylate cyclase catalytic domain AGROH133_05325 PF01612 3'-5' exonuclease AGROH133_05325 PF00570 HRDC domain AGROH133_05326 PF07690 Major Facilitator Superfamily AGROH133_05327 PF02938 GAD domain AGROH133_05327 PF00152 tRNA synthetases class II (D, K and N) AGROH133_05327 PF01336 OB-fold nucleic acid binding domain AGROH133_05328 PF06123 Inner membrane protein CreD AGROH133_05335 PF01740 STAS domain AGROH133_05335 PF00916 Sulfate permease family AGROH133_05350 PF03989 DNA gyrase C-terminal domain, beta-propeller AGROH133_05350 PF00521 DNA gyrase/topoisomerase IV, subunit A AGROH133_05352 PF04377 Arginine-tRNA-protein transferase, C terminus AGROH133_05352 PF04376 Arginine-tRNA-protein transferase, N terminus AGROH133_05357 PF00490 Delta-aminolevulinic acid dehydratase AGROH133_05366 PF00464 Serine hydroxymethyltransferase AGROH133_05367 PF03477 ATP cone domain AGROH133_05368 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AGROH133_05368 PF01872 RibD C-terminal domain AGROH133_05369 PF00677 Lumazine binding domain AGROH133_05370 PF01810 LysE type translocator AGROH133_05377 PF00885 6,7-dimethyl-8-ribityllumazine synthase AGROH133_05378 PF01029 NusB family AGROH133_05379 PF07690 Major Facilitator Superfamily AGROH133_05392 PF03030 Inorganic H+ pyrophosphatase AGROH133_05412 PF02504 Fatty acid synthesis protein AGROH133_05413 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AGROH133_05413 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AGROH133_05414 PF00216 Bacterial DNA-binding protein AGROH133_05415 PF13411 MerR HTH family regulatory protein AGROH133_05421 PF00403 Heavy-metal-associated domain AGROH133_05430 PF00111 2Fe-2S iron-sulfur cluster binding domain AGROH133_05430 PF00970 Oxidoreductase FAD-binding domain AGROH133_05430 PF00175 Oxidoreductase NAD-binding domain AGROH133_05431 PF00376 MerR family regulatory protein AGROH133_05431 PF09278 MerR, DNA binding AGROH133_05432 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_05439 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_05439 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_05447 PF00005 ABC transporter AGROH133_05447 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_05448 PF00005 ABC transporter AGROH133_05448 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_05449 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_05452 PF02386 Cation transport protein AGROH133_05464 PF00291 Pyridoxal-phosphate dependent enzyme AGROH133_05464 PF00585 C-terminal regulatory domain of Threonine dehydratase AGROH133_05466 PF00072 Response regulator receiver domain AGROH133_05466 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_05474 PF02525 Flavodoxin-like fold AGROH133_05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_05475 PF03466 LysR substrate binding domain AGROH133_05478 PF02872 5'-nucleotidase, C-terminal domain AGROH133_05478 PF00149 Calcineurin-like phosphoesterase AGROH133_05485 PF00581 Rhodanese-like domain AGROH133_05486 PF02272 DHHA1 domain AGROH133_05486 PF01411 tRNA synthetases class II (A) AGROH133_05486 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AGROH133_05487 PF00571 CBS domain AGROH133_05487 PF00291 Pyridoxal-phosphate dependent enzyme AGROH133_05489 PF00875 DNA photolyase AGROH133_05489 PF03441 FAD binding domain of DNA photolyase AGROH133_05491 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AGROH133_05491 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AGROH133_05499 PF06055 Exopolysaccharide synthesis, ExoD AGROH133_05507 PF09335 SNARE associated Golgi protein AGROH133_05515 PF01032 FecCD transport family AGROH133_05525 PF00005 ABC transporter AGROH133_05526 PF00127 Copper binding proteins, plastocyanin/azurin family AGROH133_05528 PF00210 Ferritin-like domain AGROH133_05551 PF02397 Bacterial sugar transferase AGROH133_05557 PF00534 Glycosyl transferases group 1 AGROH133_05569 PF02628 Cytochrome oxidase assembly protein AGROH133_05578 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AGROH133_05579 PF01118 Semialdehyde dehydrogenase, NAD binding domain AGROH133_05580 PF00491 Arginase family AGROH133_05581 PF00380 Ribosomal protein S9/S16 AGROH133_05582 PF00572 Ribosomal protein L13 AGROH133_05594 PF13380 CoA binding domain AGROH133_05595 PF01053 Cys/Met metabolism PLP-dependent enzyme AGROH133_05597 PF00067 Cytochrome P450 AGROH133_05598 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_05606 PF00574 Clp protease AGROH133_05607 PF07724 AAA domain (Cdc48 subfamily) AGROH133_05607 PF10431 C-terminal, D2-small domain, of ClpB protein AGROH133_05607 PF06689 ClpX C4-type zinc finger AGROH133_05609 PF00004 ATPase family associated with various cellular activities (AAA) AGROH133_05609 PF05362 Lon protease (S16) C-terminal proteolytic domain AGROH133_05609 PF02190 ATP-dependent protease La (LON) substrate-binding domain AGROH133_05610 PF00216 Bacterial DNA-binding protein AGROH133_05611 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AGROH133_05618 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AGROH133_05623 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AGROH133_05624 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AGROH133_05626 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AGROH133_05630 PF10531 SLBB domain AGROH133_05630 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AGROH133_05630 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AGROH133_05631 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AGROH133_05631 PF00384 Molybdopterin oxidoreductase AGROH133_05631 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AGROH133_05632 PF00146 NADH dehydrogenase AGROH133_05642 PF12838 4Fe-4S dicluster domain AGROH133_05643 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AGROH133_05649 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AGROH133_05653 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AGROH133_05653 PF00361 Proton-conducting membrane transporter AGROH133_05671 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AGROH133_05671 PF00361 Proton-conducting membrane transporter AGROH133_05686 PF00361 Proton-conducting membrane transporter AGROH133_05700 PF03099 Biotin/lipoate A/B protein ligase family AGROH133_05700 PF08279 HTH domain AGROH133_05700 PF02237 Biotin protein ligase C terminal domain AGROH133_05701 PF17770 Ribonuclease J C-terminal domain AGROH133_05701 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AGROH133_05701 PF12706 Beta-lactamase superfamily domain AGROH133_05706 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AGROH133_05706 PF03129 Anticodon binding domain AGROH133_05707 PF02687 FtsX-like permease family AGROH133_05707 PF12704 MacB-like periplasmic core domain AGROH133_05712 PF00005 ABC transporter AGROH133_05713 PF07733 Bacterial DNA polymerase III alpha NTPase domain AGROH133_05713 PF02811 PHP domain AGROH133_05713 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AGROH133_05713 PF14579 Helix-hairpin-helix motif AGROH133_05716 PF00817 impB/mucB/samB family AGROH133_05716 PF11799 impB/mucB/samB family C-terminal domain AGROH133_05718 PF00072 Response regulator receiver domain AGROH133_05719 PF00072 Response regulator receiver domain AGROH133_05719 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_05720 PF00471 Ribosomal protein L33 AGROH133_05721 PF07690 Major Facilitator Superfamily AGROH133_05738 PF00575 S1 RNA binding domain AGROH133_05738 PF00773 RNB domain AGROH133_05738 PF08206 Ribonuclease B OB domain AGROH133_05738 PF08461 Ribonuclease R winged-helix domain AGROH133_05738 PF17876 Cold shock domain AGROH133_05739 PF13368 Topoisomerase C-terminal repeat AGROH133_05739 PF01396 Topoisomerase DNA binding C4 zinc finger AGROH133_05739 PF01131 DNA topoisomerase AGROH133_05739 PF01751 Toprim domain AGROH133_05741 PF02481 DNA recombination-mediator protein A AGROH133_05741 PF17782 DprA winged helix domain AGROH133_05742 PF02660 Glycerol-3-phosphate acyltransferase AGROH133_05747 PF01979 Amidohydrolase family AGROH133_05748 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AGROH133_05748 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AGROH133_05749 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AGROH133_05749 PF02770 Acyl-CoA dehydrogenase, middle domain AGROH133_05749 PF18158 Adaptive response protein AidB N-terminal domain AGROH133_05750 PF00583 Acetyltransferase (GNAT) family AGROH133_05755 PF03652 Holliday junction resolvase AGROH133_05757 PF02686 Glu-tRNAGln amidotransferase C subunit AGROH133_05758 PF01425 Amidase AGROH133_05759 PF09857 Putative toxin of bacterial toxin-antitoxin pair AGROH133_05760 PF00583 Acetyltransferase (GNAT) family AGROH133_05765 PF02637 GatB domain AGROH133_05765 PF02934 GatB/GatE catalytic domain AGROH133_05767 PF00583 Acetyltransferase (GNAT) family AGROH133_05772 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AGROH133_05773 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AGROH133_05773 PF02785 Biotin carboxylase C-terminal domain AGROH133_05773 PF00289 Biotin carboxylase, N-terminal domain AGROH133_05774 PF00364 Biotin-requiring enzyme AGROH133_05775 PF01220 Dehydroquinase class II AGROH133_05776 PF06965 Na+/H+ antiporter 1 AGROH133_05776 PF13462 Thioredoxin AGROH133_05778 PF00155 Aminotransferase class I and II AGROH133_05784 PF12111 Polyribonucleotide phosphorylase C terminal AGROH133_05784 PF10150 Ribonuclease E/G family AGROH133_05784 PF00575 S1 RNA binding domain AGROH133_05786 PF01520 N-acetylmuramoyl-L-alanine amidase AGROH133_05787 PF00905 Penicillin binding protein transpeptidase domain AGROH133_05787 PF00912 Transglycosylase AGROH133_05787 PF17092 Penicillin-binding protein OB-like domain AGROH133_05790 PF03462 PCRF domain AGROH133_05790 PF00472 RF-1 domain AGROH133_05794 PF01513 ATP-NAD kinase AGROH133_05795 PF02567 Phenazine biosynthesis-like protein AGROH133_05800 PF00111 2Fe-2S iron-sulfur cluster binding domain AGROH133_05804 PF00809 Pterin binding enzyme AGROH133_05805 PF02152 Dihydroneopterin aldolase AGROH133_05806 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AGROH133_05809 PF05128 Domain of unknown function (DUF697) AGROH133_05812 PF04317 YcjX-like family, DUF463 AGROH133_05814 PF01258 Prokaryotic dksA/traR C4-type zinc finger AGROH133_05820 PF08448 PAS fold AGROH133_05820 PF13188 PAS domain AGROH133_05820 PF00072 Response regulator receiver domain AGROH133_05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_05820 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_05824 PF02617 ATP-dependent Clp protease adaptor protein ClpS AGROH133_05825 PF10431 C-terminal, D2-small domain, of ClpB protein AGROH133_05825 PF02861 Clp amino terminal domain, pathogenicity island component AGROH133_05825 PF17871 AAA lid domain AGROH133_05825 PF07724 AAA domain (Cdc48 subfamily) AGROH133_05825 PF00004 ATPase family associated with various cellular activities (AAA) AGROH133_05859 PF03466 LysR substrate binding domain AGROH133_05859 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_05862 PF01230 HIT domain AGROH133_05869 PF00318 Ribosomal protein S2 AGROH133_05870 PF00889 Elongation factor TS AGROH133_05871 PF00696 Amino acid kinase family AGROH133_05872 PF01765 Ribosome recycling factor AGROH133_05873 PF01255 Putative undecaprenyl diphosphate synthase AGROH133_05884 PF17820 PDZ domain AGROH133_05884 PF02163 Peptidase family M50 AGROH133_05889 PF07244 Surface antigen variable number repeat AGROH133_05889 PF01103 Surface antigen AGROH133_05892 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AGROH133_05892 PF00132 Bacterial transferase hexapeptide (six repeats) AGROH133_05893 PF07977 FabA-like domain AGROH133_05894 PF00132 Bacterial transferase hexapeptide (six repeats) AGROH133_05894 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AGROH133_05895 PF17930 LpxI N-terminal domain AGROH133_05895 PF06230 LpxI C-terminal domain AGROH133_05896 PF02684 Lipid-A-disaccharide synthetase AGROH133_05897 PF00285 Citrate synthase, C-terminal domain AGROH133_05913 PF01726 LexA DNA binding domain AGROH133_05913 PF00717 Peptidase S24-like AGROH133_05915 PF00793 DAHP synthetase I family AGROH133_05917 PF03952 Enolase, N-terminal domain AGROH133_05917 PF00113 Enolase, C-terminal TIM barrel domain AGROH133_05920 PF00676 Dehydrogenase E1 component AGROH133_05921 PF02780 Transketolase, C-terminal domain AGROH133_05921 PF02779 Transketolase, pyrimidine binding domain AGROH133_05921 PF00364 Biotin-requiring enzyme AGROH133_05922 PF00364 Biotin-requiring enzyme AGROH133_05922 PF02817 e3 binding domain AGROH133_05922 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AGROH133_05924 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_05924 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AGROH133_05929 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AGROH133_05929 PF04055 Radical SAM superfamily AGROH133_05930 PF00892 EamA-like transporter family AGROH133_05944 PF03364 Polyketide cyclase / dehydrase and lipid transport AGROH133_05945 PF02464 Competence-damaged protein AGROH133_05946 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AGROH133_05946 PF02542 YgbB family AGROH133_05947 PF01207 Dihydrouridine synthase (Dus) AGROH133_05948 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_05948 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_05948 PF00989 PAS fold AGROH133_05949 PF02954 Bacterial regulatory protein, Fis family AGROH133_05949 PF00072 Response regulator receiver domain AGROH133_05949 PF00158 Sigma-54 interaction domain AGROH133_05951 PF00672 HAMP domain AGROH133_05951 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_05951 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_05951 PF00989 PAS fold AGROH133_05957 PF02954 Bacterial regulatory protein, Fis family AGROH133_05957 PF00072 Response regulator receiver domain AGROH133_05957 PF00158 Sigma-54 interaction domain AGROH133_05959 PF02080 TrkA-C domain AGROH133_05959 PF02254 TrkA-N domain AGROH133_05960 PF17209 Hfq protein AGROH133_05962 PF13167 GTP-binding GTPase N-terminal AGROH133_05962 PF01926 50S ribosome-binding GTPase AGROH133_05962 PF16360 GTP-binding GTPase Middle Region AGROH133_05963 PF03819 MazG nucleotide pyrophosphohydrolase domain AGROH133_05965 PF14824 Sirohaem biosynthesis protein central AGROH133_05965 PF10414 Sirohaem synthase dimerisation region AGROH133_05965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AGROH133_05969 PF00970 Oxidoreductase FAD-binding domain AGROH133_05969 PF00175 Oxidoreductase NAD-binding domain AGROH133_05970 PF07690 Major Facilitator Superfamily AGROH133_05985 PF02347 Glycine cleavage system P-protein AGROH133_05986 PF01597 Glycine cleavage H-protein AGROH133_05987 PF08669 Glycine cleavage T-protein C-terminal barrel domain AGROH133_05987 PF01571 Aminomethyltransferase folate-binding domain AGROH133_05997 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AGROH133_06002 PF00849 RNA pseudouridylate synthase AGROH133_06002 PF01479 S4 domain AGROH133_06003 PF13419 Haloacid dehalogenase-like hydrolase AGROH133_06007 PF00440 Bacterial regulatory proteins, tetR family AGROH133_06008 PF01042 Endoribonuclease L-PSP AGROH133_06009 PF00756 Putative esterase AGROH133_06018 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AGROH133_06020 PF00578 AhpC/TSA family AGROH133_06020 PF10417 C-terminal domain of 1-Cys peroxiredoxin AGROH133_06022 PF00043 Glutathione S-transferase, C-terminal domain AGROH133_06022 PF02798 Glutathione S-transferase, N-terminal domain AGROH133_06031 PF04542 Sigma-70 region 2 AGROH133_06031 PF08281 Sigma-70, region 4 AGROH133_06038 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_06038 PF03466 LysR substrate binding domain AGROH133_06040 PF04303 PrpF protein AGROH133_06043 PF00005 ABC transporter AGROH133_06044 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_06050 PF00072 Response regulator receiver domain AGROH133_06050 PF13426 PAS domain AGROH133_06050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_06051 PF00072 Response regulator receiver domain AGROH133_06052 PF13426 PAS domain AGROH133_06052 PF08447 PAS fold AGROH133_06052 PF07536 HWE histidine kinase AGROH133_06053 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_06053 PF13426 PAS domain AGROH133_06053 PF00072 Response regulator receiver domain AGROH133_06055 PF00034 Cytochrome c AGROH133_06059 PF05199 GMC oxidoreductase AGROH133_06059 PF00732 GMC oxidoreductase AGROH133_06062 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_06062 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_06064 PF00356 Bacterial regulatory proteins, lacI family AGROH133_06066 PF02653 Branched-chain amino acid transport system / permease component AGROH133_06077 PF02653 Branched-chain amino acid transport system / permease component AGROH133_06089 PF00005 ABC transporter AGROH133_06090 PF13407 Periplasmic binding protein domain AGROH133_06092 PF00075 RNase H AGROH133_06098 PF13649 Methyltransferase domain AGROH133_06099 PF00654 Voltage gated chloride channel AGROH133_06111 PF12706 Beta-lactamase superfamily domain AGROH133_06111 PF03099 Biotin/lipoate A/B protein ligase family AGROH133_06112 PF01026 TatD related DNase AGROH133_06113 PF08264 Anticodon-binding domain of tRNA AGROH133_06113 PF09334 tRNA synthetases class I (M) AGROH133_06114 PF09115 DNA polymerase III, delta subunit, C terminal AGROH133_06115 PF02223 Thymidylate kinase AGROH133_06116 PF07943 Penicillin-binding protein 5, C-terminal domain AGROH133_06116 PF00768 D-alanyl-D-alanine carboxypeptidase AGROH133_06118 PF03330 Lytic transglycolase AGROH133_06118 PF05036 Sporulation related domain AGROH133_06135 PF03989 DNA gyrase C-terminal domain, beta-propeller AGROH133_06135 PF00521 DNA gyrase/topoisomerase IV, subunit A AGROH133_06136 PF01914 MarC family integral membrane protein AGROH133_06143 PF01743 Poly A polymerase head domain AGROH133_06143 PF01368 DHH family AGROH133_06143 PF00571 CBS domain AGROH133_06143 PF02272 DHHA1 domain AGROH133_06149 PF00436 Single-strand binding protein family AGROH133_06150 PF17755 UvrA DNA-binding domain AGROH133_06150 PF17760 UvrA interaction domain AGROH133_06152 PF01207 Dihydrouridine synthase (Dus) AGROH133_06153 PF00589 Phage integrase family AGROH133_06185 PF05974 Domain of unknown function (DUF892) AGROH133_06200 PF01343 Peptidase family S49 AGROH133_06220 PF01557 Fumarylacetoacetate (FAA) hydrolase family AGROH133_06221 PF00132 Bacterial transferase hexapeptide (six repeats) AGROH133_06224 PF00950 ABC 3 transport family AGROH133_06232 PF00005 ABC transporter AGROH133_06233 PF01297 Zinc-uptake complex component A periplasmic AGROH133_06238 PF00248 Aldo/keto reductase family AGROH133_06241 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AGROH133_06241 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AGROH133_06242 PF03597 Cytochrome oxidase maturation protein cbb3-type AGROH133_06252 PF05751 FixH AGROH133_06254 PF13746 4Fe-4S dicluster domain AGROH133_06254 PF12801 4Fe-4S binding domain AGROH133_06254 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AGROH133_06263 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AGROH133_06263 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AGROH133_06269 PF00115 Cytochrome C and Quinol oxidase polypeptide I AGROH133_06286 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AGROH133_06300 PF09278 MerR, DNA binding AGROH133_06300 PF00376 MerR family regulatory protein AGROH133_06302 PF00571 CBS domain AGROH133_06302 PF01769 Divalent cation transporter AGROH133_06302 PF03448 MgtE intracellular N domain AGROH133_06308 PF00384 Molybdopterin oxidoreductase AGROH133_06310 PF01327 Polypeptide deformylase AGROH133_06320 PF03099 Biotin/lipoate A/B protein ligase family AGROH133_06321 PF00107 Zinc-binding dehydrogenase AGROH133_06321 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_06337 PF02355 Protein export membrane protein AGROH133_06337 PF07549 SecD/SecF GG Motif AGROH133_06351 PF02699 Preprotein translocase subunit AGROH133_06354 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_06354 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AGROH133_06357 PF00067 Cytochrome P450 AGROH133_06359 PF00132 Bacterial transferase hexapeptide (six repeats) AGROH133_06359 PF06426 Serine acetyltransferase, N-terminal AGROH133_06360 PF00561 alpha/beta hydrolase fold AGROH133_06363 PF01494 FAD binding domain AGROH133_06365 PF01053 Cys/Met metabolism PLP-dependent enzyme AGROH133_06366 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_06369 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_06379 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_06388 PF00005 ABC transporter AGROH133_06392 PF01368 DHH family AGROH133_06392 PF02272 DHHA1 domain AGROH133_06392 PF17768 RecJ OB domain AGROH133_06395 PF03447 Homoserine dehydrogenase, NAD binding domain AGROH133_06395 PF01842 ACT domain AGROH133_06395 PF00742 Homoserine dehydrogenase AGROH133_06396 PF00155 Aminotransferase class I and II AGROH133_06398 PF01156 Inosine-uridine preferring nucleoside hydrolase AGROH133_06399 PF01925 Sulfite exporter TauE/SafE AGROH133_06409 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_06409 PF00107 Zinc-binding dehydrogenase AGROH133_06410 PF00109 Beta-ketoacyl synthase, N-terminal domain AGROH133_06410 PF02801 Beta-ketoacyl synthase, C-terminal domain AGROH133_06413 PF07977 FabA-like domain AGROH133_06414 PF00550 Phosphopantetheine attachment site AGROH133_06415 PF04055 Radical SAM superfamily AGROH133_06416 PF00027 Cyclic nucleotide-binding domain AGROH133_06416 PF13545 Crp-like helix-turn-helix domain AGROH133_06421 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AGROH133_06422 PF03749 Sugar fermentation stimulation protein RE domain AGROH133_06422 PF17746 SfsA N-terminal OB domain AGROH133_06423 PF00557 Metallopeptidase family M24 AGROH133_06424 PF04002 RadC-like JAB domain AGROH133_06429 PF01474 Class-II DAHP synthetase family AGROH133_06430 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_06430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AGROH133_06433 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AGROH133_06434 PF13419 Haloacid dehalogenase-like hydrolase AGROH133_06437 PF10415 Fumarase C C-terminus AGROH133_06437 PF00206 Lyase AGROH133_06440 PF00117 Glutamine amidotransferase class-I AGROH133_06440 PF06418 CTP synthase N-terminus AGROH133_06442 PF03840 Preprotein translocase SecG subunit AGROH133_06445 PF00121 Triosephosphate isomerase AGROH133_06448 PF00204 DNA gyrase B AGROH133_06448 PF00986 DNA gyrase B subunit, carboxyl terminus AGROH133_06448 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_06448 PF01751 Toprim domain AGROH133_06449 PF00574 Clp protease AGROH133_06451 PF01022 Bacterial regulatory protein, arsR family AGROH133_06452 PF13091 PLD-like domain AGROH133_06454 PF00072 Response regulator receiver domain AGROH133_06455 PF01266 FAD dependent oxidoreductase AGROH133_06455 PF16350 FAD dependent oxidoreductase central domain AGROH133_06455 PF01571 Aminomethyltransferase folate-binding domain AGROH133_06455 PF08669 Glycine cleavage T-protein C-terminal barrel domain AGROH133_06459 PF12795 Mechanosensitive ion channel porin domain AGROH133_06459 PF12794 Mechanosensitive ion channel inner membrane domain 1 AGROH133_06459 PF00924 Mechanosensitive ion channel AGROH133_06504 PF00005 ABC transporter AGROH133_06505 PF02405 Permease MlaE AGROH133_06512 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AGROH133_06512 PF13378 Enolase C-terminal domain-like AGROH133_06515 PF00390 Malic enzyme, N-terminal domain AGROH133_06515 PF03949 Malic enzyme, NAD binding domain AGROH133_06515 PF01515 Phosphate acetyl/butaryl transferase AGROH133_06517 PF00881 Nitroreductase family AGROH133_06518 PF07676 WD40-like Beta Propeller Repeat AGROH133_06520 PF00795 Carbon-nitrogen hydrolase AGROH133_06520 PF02540 NAD synthase AGROH133_06521 PF00884 Sulfatase AGROH133_06531 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_06531 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AGROH133_06536 PF05698 Bacterial trigger factor protein (TF) C-terminus AGROH133_06536 PF05697 Bacterial trigger factor protein (TF) AGROH133_06536 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AGROH133_06540 PF01134 Glucose inhibited division protein A AGROH133_06548 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_06548 PF00107 Zinc-binding dehydrogenase AGROH133_06550 PF00550 Phosphopantetheine attachment site AGROH133_06551 PF00501 AMP-binding enzyme AGROH133_06551 PF13193 AMP-binding enzyme C-terminal domain AGROH133_06551 PF00668 Condensation domain AGROH133_06551 PF00550 Phosphopantetheine attachment site AGROH133_06551 PF00975 Thioesterase domain AGROH133_06552 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AGROH133_06552 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AGROH133_06553 PF00425 chorismate binding enzyme AGROH133_06553 PF04715 Anthranilate synthase component I, N terminal region AGROH133_06553 PF00117 Glutamine amidotransferase class-I AGROH133_06554 PF01702 Queuine tRNA-ribosyltransferase AGROH133_06555 PF02547 Queuosine biosynthesis protein AGROH133_06556 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AGROH133_06557 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AGROH133_06560 PF01467 Cytidylyltransferase-like AGROH133_06571 PF02885 Glycosyl transferase family, helical bundle domain AGROH133_06571 PF00591 Glycosyl transferase family, a/b domain AGROH133_06572 PF00218 Indole-3-glycerol phosphate synthase AGROH133_06573 PF01967 MoaC family AGROH133_06574 PF00994 Probable molybdopterin binding domain AGROH133_06574 PF03454 MoeA C-terminal region (domain IV) AGROH133_06574 PF03453 MoeA N-terminal region (domain I and II) AGROH133_06575 PF17158 Membrane-associated sensor, integral membrane domain AGROH133_06575 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_06577 PF02254 TrkA-N domain AGROH133_06577 PF00999 Sodium/hydrogen exchanger family AGROH133_06591 PF06463 Molybdenum Cofactor Synthesis C AGROH133_06591 PF04055 Radical SAM superfamily AGROH133_06592 PF00892 EamA-like transporter family AGROH133_06602 PF07690 Major Facilitator Superfamily AGROH133_06616 PF12804 MobA-like NTP transferase domain AGROH133_06617 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AGROH133_06618 PF01551 Peptidase family M23 AGROH133_06620 PF01975 Survival protein SurE AGROH133_06621 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AGROH133_06621 PF02403 Seryl-tRNA synthetase N-terminal domain AGROH133_06622 PF00902 Sec-independent protein translocase protein (TatC) AGROH133_06629 PF02416 mttA/Hcf106 family AGROH133_06631 PF02416 mttA/Hcf106 family AGROH133_06633 PF04079 Segregation and condensation complex subunit ScpB AGROH133_06634 PF02616 Segregation and condensation protein ScpA AGROH133_06635 PF00933 Glycosyl hydrolase family 3 N terminal domain AGROH133_06637 PF03485 Arginyl tRNA synthetase N terminal domain AGROH133_06637 PF05746 DALR anticodon binding domain AGROH133_06637 PF00750 tRNA synthetases class I (R) AGROH133_06638 PF13286 Phosphohydrolase-associated domain AGROH133_06638 PF01966 HD domain AGROH133_06639 PF01521 Iron-sulphur cluster biosynthesis AGROH133_06641 PF08238 Sel1 repeat AGROH133_06648 PF10458 Valyl tRNA synthetase tRNA binding arm AGROH133_06648 PF08264 Anticodon-binding domain of tRNA AGROH133_06648 PF00133 tRNA synthetases class I (I, L, M and V) AGROH133_06661 PF03358 NADPH-dependent FMN reductase AGROH133_06662 PF18146 Damage-inducible protein CinA KH domain AGROH133_06662 PF00994 Probable molybdopterin binding domain AGROH133_06662 PF02464 Competence-damaged protein AGROH133_06663 PF00582 Universal stress protein family AGROH133_06664 PF00156 Phosphoribosyl transferase domain AGROH133_06665 PF02867 Ribonucleotide reductase, barrel domain AGROH133_06665 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AGROH133_06670 PF01566 Natural resistance-associated macrophage protein AGROH133_06684 PF00005 ABC transporter AGROH133_06684 PF00664 ABC transporter transmembrane region AGROH133_06689 PF01594 AI-2E family transporter AGROH133_06698 PF00583 Acetyltransferase (GNAT) family AGROH133_06706 PF02824 TGS domain AGROH133_06706 PF03129 Anticodon binding domain AGROH133_06706 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AGROH133_06706 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AGROH133_06708 PF01809 Putative membrane protein insertion efficiency factor AGROH133_06710 PF01227 GTP cyclohydrolase I AGROH133_06711 PF01502 Phosphoribosyl-AMP cyclohydrolase AGROH133_06712 PF01734 Patatin-like phospholipase AGROH133_06713 PF00478 IMP dehydrogenase / GMP reductase domain AGROH133_06713 PF00571 CBS domain AGROH133_06729 PF03315 Serine dehydratase beta chain AGROH133_06729 PF03313 Serine dehydratase alpha chain AGROH133_06738 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_06738 PF03466 LysR substrate binding domain AGROH133_06740 PF12833 Helix-turn-helix domain AGROH133_06740 PF01965 DJ-1/PfpI family AGROH133_06744 PF01256 Carbohydrate kinase AGROH133_06744 PF03853 YjeF-related protein N-terminus AGROH133_06746 PF00543 Nitrogen regulatory protein P-II AGROH133_06747 PF00120 Glutamine synthetase, catalytic domain AGROH133_06747 PF03951 Glutamine synthetase, beta-Grasp domain AGROH133_06759 PF08755 Hemimethylated DNA-binding protein YccV like AGROH133_06762 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_06765 PF00892 EamA-like transporter family AGROH133_06780 PF00270 DEAD/DEAH box helicase AGROH133_06780 PF00271 Helicase conserved C-terminal domain AGROH133_06780 PF03461 TRCF domain AGROH133_06780 PF17757 UvrB interaction domain AGROH133_06780 PF02559 CarD-like/TRCF domain AGROH133_06782 PF00270 DEAD/DEAH box helicase AGROH133_06782 PF17191 RecG wedge domain AGROH133_06782 PF00271 Helicase conserved C-terminal domain AGROH133_06785 PF01850 PIN domain AGROH133_06790 PF01380 SIS domain AGROH133_06791 PF12804 MobA-like NTP transferase domain AGROH133_06791 PF14602 Hexapeptide repeat of succinyl-transferase AGROH133_06791 PF00132 Bacterial transferase hexapeptide (six repeats) AGROH133_06792 PF00392 Bacterial regulatory proteins, gntR family AGROH133_06792 PF07729 FCD domain AGROH133_06793 PF02608 ABC transporter substrate-binding protein PnrA-like AGROH133_06795 PF02653 Branched-chain amino acid transport system / permease component AGROH133_06806 PF02653 Branched-chain amino acid transport system / permease component AGROH133_06818 PF00005 ABC transporter AGROH133_06826 PF01494 FAD binding domain AGROH133_06827 PF03547 Membrane transport protein AGROH133_06838 PF02683 Cytochrome C biogenesis protein transmembrane region AGROH133_06850 PF12900 Pyridoxamine 5'-phosphate oxidase AGROH133_06853 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AGROH133_06854 PF00313 'Cold-shock' DNA-binding domain AGROH133_06899 PF00005 ABC transporter AGROH133_06899 PF02687 FtsX-like permease family AGROH133_06899 PF12704 MacB-like periplasmic core domain AGROH133_06900 PF12704 MacB-like periplasmic core domain AGROH133_06900 PF00005 ABC transporter AGROH133_06900 PF02687 FtsX-like permease family AGROH133_06907 PF01521 Iron-sulphur cluster biosynthesis AGROH133_06908 PF01883 Iron-sulfur cluster assembly protein AGROH133_06909 PF00266 Aminotransferase class-V AGROH133_06910 PF01458 Uncharacterized protein family (UPF0051) AGROH133_06911 PF00005 ABC transporter AGROH133_06912 PF01458 Uncharacterized protein family (UPF0051) AGROH133_06913 PF00266 Aminotransferase class-V AGROH133_06914 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AGROH133_06915 PF03702 Anhydro-N-acetylmuramic acid kinase AGROH133_06916 PF00579 tRNA synthetases class I (W and Y) AGROH133_06919 PF00578 AhpC/TSA family AGROH133_06920 PF04305 Protein of unknown function (DUF455) AGROH133_06921 PF01476 LysM domain AGROH133_06921 PF01551 Peptidase family M23 AGROH133_06921 PF08525 Opacity-associated protein A N-terminal motif AGROH133_06923 PF00271 Helicase conserved C-terminal domain AGROH133_06923 PF00270 DEAD/DEAH box helicase AGROH133_06929 PF00834 Ribulose-phosphate 3 epimerase family AGROH133_06937 PF10397 Adenylosuccinate lyase C-terminus AGROH133_06937 PF00206 Lyase AGROH133_06939 PF01259 SAICAR synthetase AGROH133_06940 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AGROH133_06945 PF00155 Aminotransferase class I and II AGROH133_06945 PF00392 Bacterial regulatory proteins, gntR family AGROH133_06950 PF00586 AIR synthase related protein, N-terminal domain AGROH133_06950 PF02769 AIR synthase related protein, C-terminal domain AGROH133_06950 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AGROH133_06956 PF00462 Glutaredoxin AGROH133_06957 PF07690 Major Facilitator Superfamily AGROH133_06970 PF00459 Inositol monophosphatase family AGROH133_06971 PF00459 Inositol monophosphatase family AGROH133_06972 PF01171 PP-loop family AGROH133_06973 PF04960 Glutaminase AGROH133_06974 PF00163 Ribosomal protein S4/S9 N-terminal domain AGROH133_06974 PF01479 S4 domain AGROH133_06975 PF03741 Integral membrane protein TerC family AGROH133_06988 PF00892 EamA-like transporter family AGROH133_06999 PF01810 LysE type translocator AGROH133_07008 PF01177 Asp/Glu/Hydantoin racemase AGROH133_07009 PF00588 SpoU rRNA Methylase family AGROH133_07012 PF00180 Isocitrate/isopropylmalate dehydrogenase AGROH133_07015 PF02272 DHHA1 domain AGROH133_07015 PF01411 tRNA synthetases class II (A) AGROH133_07015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AGROH133_07016 PF00154 recA bacterial DNA recombination protein AGROH133_07017 PF00294 pfkB family carbohydrate kinase AGROH133_07018 PF04227 Indigoidine synthase A like protein AGROH133_07019 PF00691 OmpA family AGROH133_07019 PF01389 OmpA-like transmembrane domain AGROH133_07021 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_07023 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_07030 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_07037 PF06233 Usg-like family AGROH133_07038 PF08241 Methyltransferase domain AGROH133_07039 PF09084 NMT1/THI5 like AGROH133_07041 PF13404 AsnC-type helix-turn-helix domain AGROH133_07041 PF01037 Lrp/AsnC ligand binding domain AGROH133_07042 PF03167 Uracil DNA glycosylase superfamily AGROH133_07046 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_07046 PF00989 PAS fold AGROH133_07046 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_07052 PF01219 Prokaryotic diacylglycerol kinase AGROH133_07055 PF02277 Phosphoribosyltransferase AGROH133_07056 PF02654 Cobalamin-5-phosphate synthase AGROH133_07068 PF01061 ABC-2 type transporter AGROH133_07075 PF00005 ABC transporter AGROH133_07076 PF01925 Sulfite exporter TauE/SafE AGROH133_07087 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_07087 PF00672 HAMP domain AGROH133_07087 PF00672 HAMP domain AGROH133_07087 PF17200 Single Cache domain 2 AGROH133_07087 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_07087 PF17200 Single Cache domain 2 AGROH133_07091 PF12002 MgsA AAA+ ATPase C terminal AGROH133_07091 PF16193 AAA C-terminal domain AGROH133_07091 PF00004 ATPase family associated with various cellular activities (AAA) AGROH133_07092 PF13180 PDZ domain AGROH133_07092 PF00595 PDZ domain AGROH133_07098 PF00920 Dehydratase family AGROH133_07099 PF00174 Oxidoreductase molybdopterin binding domain AGROH133_07100 PF01794 Ferric reductase like transmembrane component AGROH133_07113 PF05675 Protein of unknown function (DUF817) AGROH133_07122 PF01196 Ribosomal protein L17 AGROH133_07123 PF01000 RNA polymerase Rpb3/RpoA insert domain AGROH133_07123 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AGROH133_07123 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AGROH133_07124 PF00411 Ribosomal protein S11 AGROH133_07125 PF00416 Ribosomal protein S13/S18 AGROH133_07127 PF00344 SecY translocase AGROH133_07136 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AGROH133_07137 PF00327 Ribosomal protein L30p/L7e AGROH133_07138 PF00333 Ribosomal protein S5, N-terminal domain AGROH133_07138 PF03719 Ribosomal protein S5, C-terminal domain AGROH133_07139 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AGROH133_07140 PF00347 Ribosomal protein L6 AGROH133_07141 PF00410 Ribosomal protein S8 AGROH133_07142 PF00253 Ribosomal protein S14p/S29e AGROH133_07143 PF00673 ribosomal L5P family C-terminus AGROH133_07143 PF00281 Ribosomal protein L5 AGROH133_07144 PF00467 KOW motif AGROH133_07144 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AGROH133_07145 PF00238 Ribosomal protein L14p/L23e AGROH133_07146 PF00366 Ribosomal protein S17 AGROH133_07147 PF00831 Ribosomal L29 protein AGROH133_07148 PF00252 Ribosomal protein L16p/L10e AGROH133_07149 PF00189 Ribosomal protein S3, C-terminal domain AGROH133_07149 PF07650 KH domain AGROH133_07150 PF00237 Ribosomal protein L22p/L17e AGROH133_07151 PF00203 Ribosomal protein S19 AGROH133_07152 PF00181 Ribosomal Proteins L2, RNA binding domain AGROH133_07152 PF03947 Ribosomal Proteins L2, C-terminal domain AGROH133_07153 PF00276 Ribosomal protein L23 AGROH133_07154 PF00573 Ribosomal protein L4/L1 family AGROH133_07155 PF00297 Ribosomal protein L3 AGROH133_07156 PF00338 Ribosomal protein S10p/S20e AGROH133_07157 PF00009 Elongation factor Tu GTP binding domain AGROH133_07157 PF03143 Elongation factor Tu C-terminal domain AGROH133_07157 PF03144 Elongation factor Tu domain 2 AGROH133_07158 PF03144 Elongation factor Tu domain 2 AGROH133_07158 PF14492 Elongation Factor G, domain II AGROH133_07158 PF03764 Elongation factor G, domain IV AGROH133_07158 PF00679 Elongation factor G C-terminus AGROH133_07158 PF00009 Elongation factor Tu GTP binding domain AGROH133_07159 PF00177 Ribosomal protein S7p/S5e AGROH133_07160 PF00164 Ribosomal protein S12/S23 AGROH133_07165 PF04997 RNA polymerase Rpb1, domain 1 AGROH133_07165 PF00623 RNA polymerase Rpb1, domain 2 AGROH133_07165 PF04983 RNA polymerase Rpb1, domain 3 AGROH133_07165 PF05000 RNA polymerase Rpb1, domain 4 AGROH133_07165 PF04998 RNA polymerase Rpb1, domain 5 AGROH133_07166 PF00562 RNA polymerase Rpb2, domain 6 AGROH133_07166 PF10385 RNA polymerase beta subunit external 1 domain AGROH133_07166 PF04565 RNA polymerase Rpb2, domain 3 AGROH133_07166 PF04561 RNA polymerase Rpb2, domain 2 AGROH133_07166 PF04563 RNA polymerase beta subunit AGROH133_07166 PF04560 RNA polymerase Rpb2, domain 7 AGROH133_07167 PF00542 Ribosomal protein L7/L12 C-terminal domain AGROH133_07167 PF16320 Ribosomal protein L7/L12 dimerisation domain AGROH133_07168 PF00466 Ribosomal protein L10 AGROH133_07169 PF00687 Ribosomal protein L1p/L10e family AGROH133_07170 PF03946 Ribosomal protein L11, N-terminal domain AGROH133_07170 PF00298 Ribosomal protein L11, RNA binding domain AGROH133_07171 PF00467 KOW motif AGROH133_07171 PF02357 Transcription termination factor nusG AGROH133_07172 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AGROH133_07176 PF00009 Elongation factor Tu GTP binding domain AGROH133_07176 PF03144 Elongation factor Tu domain 2 AGROH133_07176 PF03143 Elongation factor Tu C-terminal domain AGROH133_07177 PF03741 Integral membrane protein TerC family AGROH133_07191 PF00588 SpoU rRNA Methylase family AGROH133_07191 PF08032 RNA 2'-O ribose methyltransferase substrate binding AGROH133_07192 PF03061 Thioesterase superfamily AGROH133_07212 PF13460 NAD(P)H-binding AGROH133_07213 PF01638 HxlR-like helix-turn-helix AGROH133_07219 PF00271 Helicase conserved C-terminal domain AGROH133_07219 PF04851 Type III restriction enzyme, res subunit AGROH133_07219 PF02151 UvrB/uvrC motif AGROH133_07219 PF12344 Ultra-violet resistance protein B AGROH133_07219 PF17757 UvrB interaction domain AGROH133_07222 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AGROH133_07222 PF00756 Putative esterase AGROH133_07228 PF00226 DnaJ domain AGROH133_07228 PF01556 DnaJ C terminal domain AGROH133_07228 PF00684 DnaJ central domain AGROH133_07231 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_07231 PF17151 Periplasmic sensor domain AGROH133_07236 PF00005 ABC transporter AGROH133_07236 PF08402 TOBE domain AGROH133_07237 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_07250 PF01547 Bacterial extracellular solute-binding protein AGROH133_07252 PF00155 Aminotransferase class I and II AGROH133_07255 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AGROH133_07255 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AGROH133_07256 PF00440 Bacterial regulatory proteins, tetR family AGROH133_07258 PF06719 AraC-type transcriptional regulator N-terminus AGROH133_07258 PF12833 Helix-turn-helix domain AGROH133_07260 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_07260 PF00107 Zinc-binding dehydrogenase AGROH133_07261 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_07263 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AGROH133_07264 PF00196 Bacterial regulatory proteins, luxR family AGROH133_07264 PF03472 Autoinducer binding domain AGROH133_07266 PF14490 Helix-hairpin-helix containing domain AGROH133_07266 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AGROH133_07266 PF13538 UvrD-like helicase C-terminal domain AGROH133_07267 PF08338 Domain of unknown function (DUF1731) AGROH133_07267 PF01370 NAD dependent epimerase/dehydratase family AGROH133_07280 PF08281 Sigma-70, region 4 AGROH133_07280 PF04542 Sigma-70 region 2 AGROH133_07284 PF01810 LysE type translocator AGROH133_07292 PF00248 Aldo/keto reductase family AGROH133_07295 PF10369 Small subunit of acetolactate synthase AGROH133_07296 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AGROH133_07296 PF00205 Thiamine pyrophosphate enzyme, central domain AGROH133_07296 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AGROH133_07300 PF13302 Acetyltransferase (GNAT) domain AGROH133_07302 PF13180 PDZ domain AGROH133_07304 PF01145 SPFH domain / Band 7 family AGROH133_07307 PF01145 SPFH domain / Band 7 family AGROH133_07309 PF00186 Dihydrofolate reductase AGROH133_07310 PF00303 Thymidylate synthase AGROH133_07319 PF02913 FAD linked oxidases, C-terminal domain AGROH133_07319 PF01565 FAD binding domain AGROH133_07320 PF00873 AcrB/AcrD/AcrF family AGROH133_07333 PF13533 Biotin-lipoyl like AGROH133_07336 PF00580 UvrD/REP helicase N-terminal domain AGROH133_07336 PF13361 UvrD-like helicase C-terminal domain AGROH133_07341 PF13977 BetI-type transcriptional repressor, C-terminal AGROH133_07341 PF00440 Bacterial regulatory proteins, tetR family AGROH133_07342 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AGROH133_07343 PF00561 alpha/beta hydrolase fold AGROH133_07358 PF00857 Isochorismatase family AGROH133_07370 PF01321 Creatinase/Prolidase N-terminal domain AGROH133_07370 PF00557 Metallopeptidase family M24 AGROH133_07373 PF02630 SCO1/SenC AGROH133_07378 PF01584 CheW-like domain AGROH133_07381 PF00929 Exonuclease AGROH133_07382 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_07382 PF03466 LysR substrate binding domain AGROH133_07394 PF00583 Acetyltransferase (GNAT) family AGROH133_07396 PF00533 BRCA1 C Terminus (BRCT) domain AGROH133_07396 PF01653 NAD-dependent DNA ligase adenylation domain AGROH133_07396 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AGROH133_07396 PF03120 NAD-dependent DNA ligase OB-fold domain AGROH133_07396 PF12826 Helix-hairpin-helix motif AGROH133_07398 PF01810 LysE type translocator AGROH133_07404 PF02463 RecF/RecN/SMC N terminal domain AGROH133_07405 PF13525 Outer membrane lipoprotein AGROH133_07406 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AGROH133_07407 PF12327 FtsZ family, C-terminal domain AGROH133_07407 PF00091 Tubulin/FtsZ family, GTPase domain AGROH133_07408 PF02491 SHS2 domain inserted in FTSA AGROH133_07409 PF03799 Cell division protein FtsQ AGROH133_07409 PF08478 POTRA domain, FtsQ-type AGROH133_07410 PF07478 D-ala D-ala ligase C-terminus AGROH133_07410 PF01820 D-ala D-ala ligase N-terminus AGROH133_07411 PF07690 Major Facilitator Superfamily AGROH133_07411 PF00083 Sugar (and other) transporter AGROH133_07423 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_07426 PF01565 FAD binding domain AGROH133_07426 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AGROH133_07427 PF01225 Mur ligase family, catalytic domain AGROH133_07427 PF02875 Mur ligase family, glutamate ligase domain AGROH133_07427 PF08245 Mur ligase middle domain AGROH133_07429 PF04101 Glycosyltransferase family 28 C-terminal domain AGROH133_07429 PF03033 Glycosyltransferase family 28 N-terminal domain AGROH133_07430 PF01098 Cell cycle protein AGROH133_07441 PF02875 Mur ligase family, glutamate ligase domain AGROH133_07441 PF08245 Mur ligase middle domain AGROH133_07443 PF00953 Glycosyl transferase family 4 AGROH133_07443 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AGROH133_07454 PF08245 Mur ligase middle domain AGROH133_07454 PF01225 Mur ligase family, catalytic domain AGROH133_07454 PF02875 Mur ligase family, glutamate ligase domain AGROH133_07455 PF02875 Mur ligase family, glutamate ligase domain AGROH133_07455 PF08245 Mur ligase middle domain AGROH133_07455 PF01225 Mur ligase family, catalytic domain AGROH133_07456 PF00905 Penicillin binding protein transpeptidase domain AGROH133_07456 PF03717 Penicillin-binding Protein dimerisation domain AGROH133_07459 PF01795 MraW methylase family AGROH133_07460 PF02381 MraZ protein, putative antitoxin-like AGROH133_07466 PF01510 N-acetylmuramoyl-L-alanine amidase AGROH133_07467 PF05099 Tellurite resistance protein TerB AGROH133_07467 PF00226 DnaJ domain AGROH133_07468 PF00365 Phosphofructokinase AGROH133_07480 PF13649 Methyltransferase domain AGROH133_07481 PF01183 Glycosyl hydrolases family 25 AGROH133_07485 PF02219 Methylenetetrahydrofolate reductase AGROH133_07486 PF01209 ubiE/COQ5 methyltransferase family AGROH133_07488 PF00005 ABC transporter AGROH133_07488 PF12848 ABC transporter AGROH133_07489 PF12146 Serine aminopeptidase, S33 AGROH133_07490 PF02515 CoA-transferase family III AGROH133_07491 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AGROH133_07491 PF00205 Thiamine pyrophosphate enzyme, central domain AGROH133_07491 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AGROH133_07493 PF01042 Endoribonuclease L-PSP AGROH133_07496 PF03734 L,D-transpeptidase catalytic domain AGROH133_07496 PF01476 LysM domain AGROH133_07499 PF07690 Major Facilitator Superfamily AGROH133_07513 PF10609 NUBPL iron-transfer P-loop NTPase AGROH133_07517 PF00465 Iron-containing alcohol dehydrogenase AGROH133_07518 PF00171 Aldehyde dehydrogenase family AGROH133_07519 PF00120 Glutamine synthetase, catalytic domain AGROH133_07519 PF03951 Glutamine synthetase, beta-Grasp domain AGROH133_07520 PF13520 Amino acid permease AGROH133_07533 PF01418 Helix-turn-helix domain, rpiR family AGROH133_07533 PF01380 SIS domain AGROH133_07553 PF00005 ABC transporter AGROH133_07553 PF08402 TOBE domain AGROH133_07554 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_07554 PF00107 Zinc-binding dehydrogenase AGROH133_07559 PF07690 Major Facilitator Superfamily AGROH133_07572 PF02310 B12 binding domain AGROH133_07572 PF02607 B12 binding domain AGROH133_07572 PF02965 Vitamin B12 dependent methionine synthase, activation domain AGROH133_07572 PF00809 Pterin binding enzyme AGROH133_07572 PF02574 Homocysteine S-methyltransferase AGROH133_07580 PF13505 Outer membrane protein beta-barrel domain AGROH133_07587 PF04402 Protein of unknown function (DUF541) AGROH133_07591 PF01894 Uncharacterised protein family UPF0047 AGROH133_07592 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_07592 PF00360 Phytochrome region AGROH133_07592 PF08446 PAS fold AGROH133_07592 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_07592 PF01590 GAF domain AGROH133_07595 PF04545 Sigma-70, region 4 AGROH133_07595 PF04546 Sigma-70, non-essential region AGROH133_07595 PF03979 Sigma-70 factor, region 1.1 AGROH133_07595 PF04542 Sigma-70 region 2 AGROH133_07595 PF04539 Sigma-70 region 3 AGROH133_07595 PF00140 Sigma-70 factor, region 1.2 AGROH133_07596 PF01807 CHC2 zinc finger AGROH133_07596 PF08275 DNA primase catalytic core, N-terminal domain AGROH133_07596 PF08278 DNA primase DnaG DnaB-binding AGROH133_07596 PF10410 DnaB-helicase binding domain of primase AGROH133_07598 PF00117 Glutamine amidotransferase class-I AGROH133_07598 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AGROH133_07599 PF01554 MatE AGROH133_07611 PF00672 HAMP domain AGROH133_07611 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_07611 PF02743 Cache domain AGROH133_07620 PF04228 Putative neutral zinc metallopeptidase AGROH133_07633 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AGROH133_07633 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AGROH133_07633 PF02142 MGS-like domain AGROH133_07634 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_07634 PF17158 Membrane-associated sensor, integral membrane domain AGROH133_07642 PF03167 Uracil DNA glycosylase superfamily AGROH133_07644 PF01272 Transcription elongation factor, GreA/GreB, C-term AGROH133_07644 PF03449 Transcription elongation factor, N-terminal AGROH133_07645 PF00534 Glycosyl transferases group 1 AGROH133_07646 PF01037 Lrp/AsnC ligand binding domain AGROH133_07647 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_07649 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_07649 PF03466 LysR substrate binding domain AGROH133_07653 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AGROH133_07661 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_07661 PF03466 LysR substrate binding domain AGROH133_07665 PF01699 Sodium/calcium exchanger protein AGROH133_07677 PF00155 Aminotransferase class I and II AGROH133_07678 PF05231 MASE1 AGROH133_07678 PF00563 EAL domain AGROH133_07696 PF00313 'Cold-shock' DNA-binding domain AGROH133_07697 PF00753 Metallo-beta-lactamase superfamily AGROH133_07701 PF12802 MarR family AGROH133_07702 PF00072 Response regulator receiver domain AGROH133_07702 PF00486 Transcriptional regulatory protein, C terminal AGROH133_07703 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_07703 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_07703 PF00672 HAMP domain AGROH133_07703 PF16527 Two-component sensor protein CpxA, periplasmic domain AGROH133_07706 PF01588 Putative tRNA binding domain AGROH133_07707 PF03807 NADP oxidoreductase coenzyme F420-dependent AGROH133_07707 PF14748 Pyrroline-5-carboxylate reductase dimerisation AGROH133_07711 PF01790 Prolipoprotein diacylglyceryl transferase AGROH133_07720 PF02578 Multi-copper polyphenol oxidoreductase laccase AGROH133_07724 PF14572 Phosphoribosyl synthetase-associated domain AGROH133_07724 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AGROH133_07732 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AGROH133_07746 PF00535 Glycosyl transferase family 2 AGROH133_07747 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_07747 PF00672 HAMP domain AGROH133_07750 PF00171 Aldehyde dehydrogenase family AGROH133_07751 PF02954 Bacterial regulatory protein, Fis family AGROH133_07751 PF13426 PAS domain AGROH133_07751 PF00158 Sigma-54 interaction domain AGROH133_07753 PF00563 EAL domain AGROH133_07753 PF13188 PAS domain AGROH133_07753 PF03707 Bacterial signalling protein N terminal repeat AGROH133_07753 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_07760 PF01386 Ribosomal L25p family AGROH133_07760 PF14693 Ribosomal protein TL5, C-terminal domain AGROH133_07761 PF00563 EAL domain AGROH133_07761 PF08447 PAS fold AGROH133_07761 PF08448 PAS fold AGROH133_07761 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_07766 PF01195 Peptidyl-tRNA hydrolase AGROH133_07768 PF02617 ATP-dependent Clp protease adaptor protein ClpS AGROH133_07769 PF01926 50S ribosome-binding GTPase AGROH133_07769 PF06071 Protein of unknown function (DUF933) AGROH133_07773 PF00156 Phosphoribosyl transferase domain AGROH133_07776 PF02167 Cytochrome C1 family AGROH133_07776 PF00032 Cytochrome b(C-terminal)/b6/petD AGROH133_07776 PF00033 Cytochrome b/b6/petB AGROH133_07779 PF00032 Cytochrome b(C-terminal)/b6/petD AGROH133_07779 PF00033 Cytochrome b/b6/petB AGROH133_07789 PF00355 Rieske [2Fe-2S] domain AGROH133_07789 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AGROH133_07795 PF00664 ABC transporter transmembrane region AGROH133_07795 PF00005 ABC transporter AGROH133_07802 PF00005 ABC transporter AGROH133_07802 PF00664 ABC transporter transmembrane region AGROH133_07809 PF00588 SpoU rRNA Methylase family AGROH133_07810 PF02690 Na+/Pi-cotransporter AGROH133_07820 PF01218 Coproporphyrinogen III oxidase AGROH133_07823 PF01743 Poly A polymerase head domain AGROH133_07823 PF12627 Probable RNA and SrmB- binding site of polymerase A AGROH133_07823 PF13735 tRNA nucleotidyltransferase domain 2 putative AGROH133_07824 PF00293 NUDIX domain AGROH133_07826 PF17863 AAA lid domain AGROH133_07826 PF07726 ATPase family associated with various cellular activities (AAA) AGROH133_07837 PF00583 Acetyltransferase (GNAT) family AGROH133_07838 PF07690 Major Facilitator Superfamily AGROH133_07852 PF13409 Glutathione S-transferase, N-terminal domain AGROH133_07856 PF00682 HMGL-like AGROH133_07856 PF08502 LeuA allosteric (dimerisation) domain AGROH133_07857 PF03594 Benzoate membrane transport protein AGROH133_07870 PF06532 Negative regulator of sigma F AGROH133_07877 PF04542 Sigma-70 region 2 AGROH133_07877 PF04545 Sigma-70, region 4 AGROH133_07881 PF00574 Clp protease AGROH133_07883 PF04955 HupE / UreJ protein AGROH133_07893 PF14489 QueF-like protein AGROH133_07894 PF01545 Cation efflux family AGROH133_07894 PF16916 Dimerisation domain of Zinc Transporter AGROH133_07902 PF13458 Periplasmic binding protein AGROH133_07906 PF01022 Bacterial regulatory protein, arsR family AGROH133_07908 PF00005 ABC transporter AGROH133_07908 PF00571 CBS domain AGROH133_07909 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_07918 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AGROH133_07920 PF00265 Thymidine kinase AGROH133_07921 PF00127 Copper binding proteins, plastocyanin/azurin family AGROH133_07927 PF00196 Bacterial regulatory proteins, luxR family AGROH133_07927 PF03472 Autoinducer binding domain AGROH133_07929 PF03350 Uncharacterized protein family, UPF0114 AGROH133_07933 PF07715 TonB-dependent Receptor Plug Domain AGROH133_07933 PF04886 PT repeat AGROH133_07933 PF00593 TonB dependent receptor AGROH133_07937 PF04715 Anthranilate synthase component I, N terminal region AGROH133_07937 PF00425 chorismate binding enzyme AGROH133_07937 PF00117 Glutamine amidotransferase class-I AGROH133_07939 PF11871 Domain of unknown function (DUF3391) AGROH133_07939 PF01966 HD domain AGROH133_07940 PF01979 Amidohydrolase family AGROH133_07940 PF13382 Adenine deaminase C-terminal domain AGROH133_07941 PF00583 Acetyltransferase (GNAT) family AGROH133_07942 PF00128 Alpha amylase, catalytic domain AGROH133_07943 PF00294 pfkB family carbohydrate kinase AGROH133_07946 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AGROH133_07946 PF01926 50S ribosome-binding GTPase AGROH133_07957 PF05992 SbmA/BacA-like family AGROH133_07978 PF00557 Metallopeptidase family M24 AGROH133_07982 PF01799 [2Fe-2S] binding domain AGROH133_07982 PF00111 2Fe-2S iron-sulfur cluster binding domain AGROH133_07983 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AGROH133_07983 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AGROH133_07985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_07985 PF03466 LysR substrate binding domain AGROH133_07997 PF01979 Amidohydrolase family AGROH133_08009 PF01070 FMN-dependent dehydrogenase AGROH133_08010 PF00893 Small Multidrug Resistance protein AGROH133_08015 PF17932 Tetracyclin repressor-like, C-terminal domain AGROH133_08015 PF00440 Bacterial regulatory proteins, tetR family AGROH133_08017 PF00768 D-alanyl-D-alanine carboxypeptidase AGROH133_08017 PF07943 Penicillin-binding protein 5, C-terminal domain AGROH133_08021 PF00576 HIUase/Transthyretin family AGROH133_08022 PF04115 Ureidoglycolate lyase AGROH133_08025 PF09349 OHCU decarboxylase AGROH133_08025 PF01014 Uricase AGROH133_08027 PF06299 Protein of unknown function (DUF1045) AGROH133_08028 PF01266 FAD dependent oxidoreductase AGROH133_08030 PF01266 FAD dependent oxidoreductase AGROH133_08030 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AGROH133_08031 PF01627 Hpt domain AGROH133_08031 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_08031 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_08031 PF00672 HAMP domain AGROH133_08031 PF00072 Response regulator receiver domain AGROH133_08031 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AGROH133_08032 PF00270 DEAD/DEAH box helicase AGROH133_08032 PF00271 Helicase conserved C-terminal domain AGROH133_08044 PF07681 DoxX AGROH133_08049 PF03734 L,D-transpeptidase catalytic domain AGROH133_08049 PF01476 LysM domain AGROH133_08062 PF14403 Circularly permuted ATP-grasp type 2 AGROH133_08063 PF14403 Circularly permuted ATP-grasp type 2 AGROH133_08063 PF04168 A predicted alpha-helical domain with a conserved ER motif. AGROH133_08064 PF01841 Transglutaminase-like superfamily AGROH133_08064 PF08379 Bacterial transglutaminase-like N-terminal region AGROH133_08068 PF00300 Histidine phosphatase superfamily (branch 1) AGROH133_08070 PF02653 Branched-chain amino acid transport system / permease component AGROH133_08082 PF00005 ABC transporter AGROH133_08083 PF13407 Periplasmic binding protein domain AGROH133_08087 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_08087 PF03466 LysR substrate binding domain AGROH133_08097 PF00672 HAMP domain AGROH133_08097 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_08100 PF02607 B12 binding domain AGROH133_08100 PF02574 Homocysteine S-methyltransferase AGROH133_08100 PF00809 Pterin binding enzyme AGROH133_08100 PF02965 Vitamin B12 dependent methionine synthase, activation domain AGROH133_08100 PF02310 B12 binding domain AGROH133_08101 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08106 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08112 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_08114 PF00005 ABC transporter AGROH133_08127 PF00331 Glycosyl hydrolase family 10 AGROH133_08129 PF00535 Glycosyl transferase family 2 AGROH133_08134 PF03808 Glycosyl transferase WecB/TagA/CpsF family AGROH133_08140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AGROH133_08140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AGROH133_08140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AGROH133_08140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AGROH133_08141 PF01152 Bacterial-like globin AGROH133_08150 PF00440 Bacterial regulatory proteins, tetR family AGROH133_08150 PF08362 YcdC-like protein, C-terminal region AGROH133_08152 PF07687 Peptidase dimerisation domain AGROH133_08152 PF01546 Peptidase family M20/M25/M40 AGROH133_08153 PF01979 Amidohydrolase family AGROH133_08154 PF00293 NUDIX domain AGROH133_08155 PF00005 ABC transporter AGROH133_08156 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08163 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08175 PF00873 AcrB/AcrD/AcrF family AGROH133_08192 PF00753 Metallo-beta-lactamase superfamily AGROH133_08193 PF02492 CobW/HypB/UreG, nucleotide-binding domain AGROH133_08194 PF01730 UreF AGROH133_08195 PF05194 UreE urease accessory protein, C-terminal domain AGROH133_08195 PF02814 UreE urease accessory protein, N-terminal domain AGROH133_08196 PF08534 Redoxin AGROH133_08199 PF00449 Urease alpha-subunit, N-terminal domain AGROH133_08199 PF01979 Amidohydrolase family AGROH133_08201 PF07007 Lysozyme inhibitor LprI AGROH133_08204 PF00699 Urease beta subunit AGROH133_08205 PF06906 Protein of unknown function (DUF1272) AGROH133_08206 PF00547 Urease, gamma subunit AGROH133_08207 PF01774 UreD urease accessory protein AGROH133_08210 PF00005 ABC transporter AGROH133_08211 PF00005 ABC transporter AGROH133_08211 PF12399 Branched-chain amino acid ATP-binding cassette transporter AGROH133_08223 PF02653 Branched-chain amino acid transport system / permease component AGROH133_08235 PF10931 Protein of unknown function (DUF2735) AGROH133_08236 PF03951 Glutamine synthetase, beta-Grasp domain AGROH133_08236 PF00120 Glutamine synthetase, catalytic domain AGROH133_08238 PF00072 Response regulator receiver domain AGROH133_08238 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_08238 PF00989 PAS fold AGROH133_08238 PF01627 Hpt domain AGROH133_08238 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_08238 PF18415 Histidine kinase receptor ArcB trans-membrane domain AGROH133_08253 PF00072 Response regulator receiver domain AGROH133_08256 PF13458 Periplasmic binding protein AGROH133_08263 PF00005 ABC transporter AGROH133_08264 PF00005 ABC transporter AGROH133_08264 PF12399 Branched-chain amino acid ATP-binding cassette transporter AGROH133_08265 PF00005 ABC transporter AGROH133_08265 PF12399 Branched-chain amino acid ATP-binding cassette transporter AGROH133_08266 PF02653 Branched-chain amino acid transport system / permease component AGROH133_08266 PF11862 Domain of unknown function (DUF3382) AGROH133_08279 PF02653 Branched-chain amino acid transport system / permease component AGROH133_08288 PF00459 Inositol monophosphatase family AGROH133_08294 PF00486 Transcriptional regulatory protein, C terminal AGROH133_08294 PF00072 Response regulator receiver domain AGROH133_08299 PF10090 Histidine phosphotransferase C-terminal domain AGROH133_08305 PF00588 SpoU rRNA Methylase family AGROH133_08308 PF00849 RNA pseudouridylate synthase AGROH133_08311 PF00140 Sigma-70 factor, region 1.2 AGROH133_08311 PF04545 Sigma-70, region 4 AGROH133_08311 PF04542 Sigma-70 region 2 AGROH133_08315 PF00709 Adenylosuccinate synthetase AGROH133_08334 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AGROH133_08336 PF03167 Uracil DNA glycosylase superfamily AGROH133_08337 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AGROH133_08338 PF04304 Protein of unknown function (DUF454) AGROH133_08342 PF00005 ABC transporter AGROH133_08343 PF01032 FecCD transport family AGROH133_08353 PF01497 Periplasmic binding protein AGROH133_08356 PF06228 Haem utilisation ChuX/HutX AGROH133_08360 PF00551 Formyl transferase AGROH133_08363 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_08363 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_08363 PF00672 HAMP domain AGROH133_08365 PF00486 Transcriptional regulatory protein, C terminal AGROH133_08365 PF00072 Response regulator receiver domain AGROH133_08369 PF03401 Tripartite tricarboxylate transporter family receptor AGROH133_08376 PF01970 Tripartite tricarboxylate transporter TctA family AGROH133_08392 PF01032 FecCD transport family AGROH133_08402 PF01032 FecCD transport family AGROH133_08413 PF00005 ABC transporter AGROH133_08414 PF00210 Ferritin-like domain AGROH133_08417 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_08417 PF00672 HAMP domain AGROH133_08421 PF00248 Aldo/keto reductase family AGROH133_08422 PF07690 Major Facilitator Superfamily AGROH133_08435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_08435 PF03466 LysR substrate binding domain AGROH133_08437 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_08437 PF03466 LysR substrate binding domain AGROH133_08439 PF07859 alpha/beta hydrolase fold AGROH133_08440 PF13533 Biotin-lipoyl like AGROH133_08443 PF00873 AcrB/AcrD/AcrF family AGROH133_08458 PF13396 Phospholipase_D-nuclease N-terminal AGROH133_08458 PF13091 PLD-like domain AGROH133_08461 PF08543 Phosphomethylpyrimidine kinase AGROH133_08462 PF00484 Carbonic anhydrase AGROH133_08464 PF01118 Semialdehyde dehydrogenase, NAD binding domain AGROH133_08464 PF02774 Semialdehyde dehydrogenase, dimerisation domain AGROH133_08465 PF00083 Sugar (and other) transporter AGROH133_08478 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AGROH133_08478 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AGROH133_08478 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AGROH133_08484 PF02233 NAD(P) transhydrogenase beta subunit AGROH133_08494 PF01613 Flavin reductase like domain AGROH133_08495 PF00881 Nitroreductase family AGROH133_08496 PF00561 alpha/beta hydrolase fold AGROH133_08497 PF01042 Endoribonuclease L-PSP AGROH133_08498 PF00857 Isochorismatase family AGROH133_08499 PF00296 Luciferase-like monooxygenase AGROH133_08500 PF01126 Heme oxygenase AGROH133_08501 PF00701 Dihydrodipicolinate synthetase family AGROH133_08502 PF07729 FCD domain AGROH133_08502 PF00392 Bacterial regulatory proteins, gntR family AGROH133_08505 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08512 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08519 PF00005 ABC transporter AGROH133_08519 PF17912 MalK OB fold domain AGROH133_08519 PF03459 TOBE domain AGROH133_08520 PF00294 pfkB family carbohydrate kinase AGROH133_08521 PF03576 Peptidase family S58 AGROH133_08522 PF01063 Amino-transferase class IV AGROH133_08523 PF03466 LysR substrate binding domain AGROH133_08523 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_08526 PF00005 ABC transporter AGROH133_08526 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_08527 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_08527 PF00005 ABC transporter AGROH133_08528 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_08528 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08534 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08542 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_08545 PF01244 Membrane dipeptidase (Peptidase family M19) AGROH133_08549 PF03706 Lysylphosphatidylglycerol synthase TM region AGROH133_08549 PF09924 Uncharacterised conserved protein (DUF2156) AGROH133_08568 PF07690 Major Facilitator Superfamily AGROH133_08582 PF04444 Catechol dioxygenase N terminus AGROH133_08582 PF00775 Dioxygenase AGROH133_08583 PF00465 Iron-containing alcohol dehydrogenase AGROH133_08584 PF04909 Amidohydrolase AGROH133_08585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AGROH133_08585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AGROH133_08586 PF01613 Flavin reductase like domain AGROH133_08591 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_08591 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_08595 PF00486 Transcriptional regulatory protein, C terminal AGROH133_08595 PF00072 Response regulator receiver domain AGROH133_08598 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AGROH133_08599 PF08402 TOBE domain AGROH133_08599 PF00005 ABC transporter AGROH133_08600 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08622 PF00072 Response regulator receiver domain AGROH133_08622 PF00486 Transcriptional regulatory protein, C terminal AGROH133_08623 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_08623 PF08448 PAS fold AGROH133_08623 PF13188 PAS domain AGROH133_08623 PF00072 Response regulator receiver domain AGROH133_08623 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_08628 PF13614 AAA domain AGROH133_08629 PF01339 CheB methylesterase AGROH133_08629 PF00072 Response regulator receiver domain AGROH133_08630 PF01739 CheR methyltransferase, SAM binding domain AGROH133_08630 PF03705 CheR methyltransferase, all-alpha domain AGROH133_08631 PF01584 CheW-like domain AGROH133_08632 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_08632 PF00672 HAMP domain AGROH133_08632 PF02203 Tar ligand binding domain homologue AGROH133_08636 PF01584 CheW-like domain AGROH133_08637 PF01627 Hpt domain AGROH133_08637 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_08637 PF02895 Signal transducing histidine kinase, homodimeric domain AGROH133_08637 PF01584 CheW-like domain AGROH133_08637 PF09078 CheY binding AGROH133_08638 PF00072 Response regulator receiver domain AGROH133_08640 PF00072 Response regulator receiver domain AGROH133_08641 PF00296 Luciferase-like monooxygenase AGROH133_08642 PF01613 Flavin reductase like domain AGROH133_08643 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_08643 PF03466 LysR substrate binding domain AGROH133_08645 PF00355 Rieske [2Fe-2S] domain AGROH133_08646 PF00005 ABC transporter AGROH133_08647 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_08649 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08654 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08659 PF01565 FAD binding domain AGROH133_08659 PF02913 FAD linked oxidases, C-terminal domain AGROH133_08660 PF00155 Aminotransferase class I and II AGROH133_08661 PF00042 Globin AGROH133_08661 PF00175 Oxidoreductase NAD-binding domain AGROH133_08661 PF00970 Oxidoreductase FAD-binding domain AGROH133_08669 PF01259 SAICAR synthetase AGROH133_08672 PF00529 HlyD membrane-fusion protein of T1SS AGROH133_08672 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AGROH133_08674 PF00873 AcrB/AcrD/AcrF family AGROH133_08687 PF02321 Outer membrane efflux protein AGROH133_08688 PF09285 Elongation factor P, C-terminal AGROH133_08688 PF01132 Elongation factor P (EF-P) OB domain AGROH133_08688 PF08207 Elongation factor P (EF-P) KOW-like domain AGROH133_08689 PF00152 tRNA synthetases class II (D, K and N) AGROH133_08690 PF04055 Radical SAM superfamily AGROH133_08690 PF12544 Lysine-2,3-aminomutase AGROH133_08694 PF03466 LysR substrate binding domain AGROH133_08694 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_08697 PF01266 FAD dependent oxidoreductase AGROH133_08700 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08706 PF00005 ABC transporter AGROH133_08706 PF03459 TOBE domain AGROH133_08708 PF03576 Peptidase family S58 AGROH133_08709 PF05690 Thiazole biosynthesis protein ThiG AGROH133_08711 PF01266 FAD dependent oxidoreductase AGROH133_08712 PF13667 ThiC-associated domain AGROH133_08712 PF01964 Radical SAM ThiC family AGROH133_08713 PF00550 Phosphopantetheine attachment site AGROH133_08719 PF00664 ABC transporter transmembrane region AGROH133_08719 PF00005 ABC transporter AGROH133_08723 PF00027 Cyclic nucleotide-binding domain AGROH133_08723 PF13545 Crp-like helix-turn-helix domain AGROH133_08725 PF00211 Adenylate and Guanylate cyclase catalytic domain AGROH133_08725 PF00672 HAMP domain AGROH133_08733 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AGROH133_08733 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AGROH133_08733 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AGROH133_08734 PF13439 Glycosyltransferase Family 4 AGROH133_08734 PF00534 Glycosyl transferases group 1 AGROH133_08737 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_08737 PF00005 ABC transporter AGROH133_08738 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_08740 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08741 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_08741 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08748 PF13439 Glycosyltransferase Family 4 AGROH133_08748 PF00534 Glycosyl transferases group 1 AGROH133_08749 PF04101 Glycosyltransferase family 28 C-terminal domain AGROH133_08749 PF03033 Glycosyltransferase family 28 N-terminal domain AGROH133_08750 PF03932 CutC family AGROH133_08765 PF00728 Glycosyl hydrolase family 20, catalytic domain AGROH133_08765 PF02838 Glycosyl hydrolase family 20, domain 2 AGROH133_08768 PF01418 Helix-turn-helix domain, rpiR family AGROH133_08768 PF01380 SIS domain AGROH133_08771 PF00005 ABC transporter AGROH133_08771 PF17912 MalK OB fold domain AGROH133_08772 PF01547 Bacterial extracellular solute-binding protein AGROH133_08775 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08782 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_08792 PF00392 Bacterial regulatory proteins, gntR family AGROH133_08792 PF07702 UTRA domain AGROH133_08794 PF01380 SIS domain AGROH133_08795 PF01979 Amidohydrolase family AGROH133_08796 PF00480 ROK family AGROH133_08797 PF01494 FAD binding domain AGROH133_08799 PF01569 PAP2 superfamily AGROH133_08806 PF13288 DXP reductoisomerase C-terminal domain AGROH133_08806 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AGROH133_08806 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AGROH133_08807 PF00155 Aminotransferase class I and II AGROH133_08810 PF17243 POTRA domain TamA domain 1 AGROH133_08810 PF07244 Surface antigen variable number repeat AGROH133_08810 PF01103 Surface antigen AGROH133_08816 PF01584 CheW-like domain AGROH133_08817 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_08817 PF08447 PAS fold AGROH133_08817 PF13426 PAS domain AGROH133_08818 PF02634 FdhD/NarQ family AGROH133_08819 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AGROH133_08820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AGROH133_08820 PF02874 ATP synthase alpha/beta family, beta-barrel domain AGROH133_08821 PF00231 ATP synthase AGROH133_08822 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AGROH133_08822 PF00306 ATP synthase alpha/beta chain, C terminal domain AGROH133_08822 PF02874 ATP synthase alpha/beta family, beta-barrel domain AGROH133_08823 PF00213 ATP synthase delta (OSCP) subunit AGROH133_08829 PF00270 DEAD/DEAH box helicase AGROH133_08829 PF17764 3′ DNA-binding domain (3′BD) AGROH133_08829 PF18074 Primosomal protein N C-terminal domain AGROH133_08829 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AGROH133_08831 PF00589 Phage integrase family AGROH133_08831 PF02899 Phage integrase, N-terminal SAM-like domain AGROH133_08839 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_08839 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AGROH133_08840 PF01810 LysE type translocator AGROH133_08851 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AGROH133_08851 PF00364 Biotin-requiring enzyme AGROH133_08851 PF02817 e3 binding domain AGROH133_08852 PF16078 2-oxoglutarate dehydrogenase N-terminus AGROH133_08852 PF00676 Dehydrogenase E1 component AGROH133_08852 PF16870 2-oxoglutarate dehydrogenase C-terminal AGROH133_08852 PF02779 Transketolase, pyrimidine binding domain AGROH133_08853 PF00549 CoA-ligase AGROH133_08853 PF02629 CoA binding domain AGROH133_08854 PF00549 CoA-ligase AGROH133_08854 PF08442 ATP-grasp domain AGROH133_08855 PF00056 lactate/malate dehydrogenase, NAD binding domain AGROH133_08855 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AGROH133_08856 PF03969 AFG1-like ATPase AGROH133_08857 PF02974 Protease inhibitor Inh AGROH133_08858 PF13085 2Fe-2S iron-sulfur cluster binding domain AGROH133_08858 PF13237 4Fe-4S dicluster domain AGROH133_08859 PF00890 FAD binding domain AGROH133_08859 PF02910 Fumarate reductase flavoprotein C-term AGROH133_08864 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AGROH133_08874 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AGROH133_08874 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AGROH133_08876 PF00814 Glycoprotease family AGROH133_08877 PF03900 Porphobilinogen deaminase, C-terminal domain AGROH133_08877 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AGROH133_08885 PF00117 Glutamine amidotransferase class-I AGROH133_08895 PF02325 YGGT family AGROH133_08898 PF02594 Uncharacterised ACR, YggU family COG1872 AGROH133_08899 PF00719 Inorganic pyrophosphatase AGROH133_08901 PF00679 Elongation factor G C-terminus AGROH133_08901 PF00009 Elongation factor Tu GTP binding domain AGROH133_08901 PF03144 Elongation factor Tu domain 2 AGROH133_08902 PF01432 Peptidase family M3 AGROH133_08904 PF01047 MarR family AGROH133_08906 PF07690 Major Facilitator Superfamily AGROH133_08920 PF00764 Arginosuccinate synthase AGROH133_08921 PF00106 short chain dehydrogenase AGROH133_08922 PF01810 LysE type translocator AGROH133_08929 PF00005 ABC transporter AGROH133_08930 PF02653 Branched-chain amino acid transport system / permease component AGROH133_08941 PF04055 Radical SAM superfamily AGROH133_08945 PF01329 Pterin 4 alpha carbinolamine dehydratase AGROH133_08946 PF01451 Low molecular weight phosphotyrosine protein phosphatase AGROH133_08947 PF02834 LigT like Phosphoesterase AGROH133_08948 PF13472 GDSL-like Lipase/Acylhydrolase family AGROH133_08951 PF00005 ABC transporter AGROH133_08964 PF01027 Inhibitor of apoptosis-promoting Bax1 AGROH133_08975 PF00694 Aconitase C-terminal domain AGROH133_08975 PF00330 Aconitase family (aconitate hydratase) AGROH133_08976 PF00005 ABC transporter AGROH133_08977 PF03379 CcmB protein AGROH133_08985 PF01578 Cytochrome C assembly protein AGROH133_08994 PF08534 Redoxin AGROH133_08996 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_09003 PF10755 Protein of unknown function (DUF2585) AGROH133_09007 PF04279 Intracellular septation protein A AGROH133_09014 PF00448 SRP54-type protein, GTPase domain AGROH133_09014 PF02881 SRP54-type protein, helical bundle domain AGROH133_09015 PF00919 Uncharacterized protein family UPF0004 AGROH133_09015 PF04055 Radical SAM superfamily AGROH133_09016 PF01678 Diaminopimelate epimerase AGROH133_09017 PF12706 Beta-lactamase superfamily domain AGROH133_09020 PF00448 SRP54-type protein, GTPase domain AGROH133_09020 PF02881 SRP54-type protein, helical bundle domain AGROH133_09020 PF02978 Signal peptide binding domain AGROH133_09021 PF01817 Chorismate mutase type II AGROH133_09021 PF02153 Prephenate dehydrogenase AGROH133_09022 PF00886 Ribosomal protein S16 AGROH133_09023 PF05239 PRC-barrel domain AGROH133_09023 PF01782 RimM N-terminal domain AGROH133_09024 PF01746 tRNA (Guanine-1)-methyltransferase AGROH133_09034 PF01245 Ribosomal protein L19 AGROH133_09035 PF00005 ABC transporter AGROH133_09035 PF00664 ABC transporter transmembrane region AGROH133_09040 PF00529 HlyD membrane-fusion protein of T1SS AGROH133_09040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AGROH133_09043 PF02371 Transposase IS116/IS110/IS902 family AGROH133_09043 PF01548 Transposase AGROH133_09045 PF07690 Major Facilitator Superfamily AGROH133_09059 PF00330 Aconitase family (aconitate hydratase) AGROH133_09060 PF01435 Peptidase family M48 AGROH133_09063 PF00005 ABC transporter AGROH133_09064 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09078 PF01547 Bacterial extracellular solute-binding protein AGROH133_09081 PF16326 ABC transporter C-terminal domain AGROH133_09081 PF00005 ABC transporter AGROH133_09083 PF04204 Homoserine O-succinyltransferase AGROH133_09084 PF01263 Aldose 1-epimerase AGROH133_09085 PF00912 Transglycosylase AGROH133_09086 PF00348 Polyprenyl synthetase AGROH133_09087 PF13488 Glycine zipper AGROH133_09087 PF00691 OmpA family AGROH133_09090 PF04551 GcpE protein AGROH133_09091 PF07690 Major Facilitator Superfamily AGROH133_09104 PF08220 DeoR-like helix-turn-helix domain AGROH133_09104 PF00455 DeoR C terminal sensor domain AGROH133_09106 PF02785 Biotin carboxylase C-terminal domain AGROH133_09106 PF00289 Biotin carboxylase, N-terminal domain AGROH133_09106 PF00364 Biotin-requiring enzyme AGROH133_09106 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AGROH133_09106 PF00682 HMGL-like AGROH133_09106 PF02436 Conserved carboxylase domain AGROH133_09107 PF00196 Bacterial regulatory proteins, luxR family AGROH133_09107 PF00072 Response regulator receiver domain AGROH133_09109 PF00005 ABC transporter AGROH133_09109 PF00664 ABC transporter transmembrane region AGROH133_09116 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AGROH133_09116 PF06165 Glycosyltransferase family 36 AGROH133_09116 PF10091 Putative glucoamylase AGROH133_09123 PF07687 Peptidase dimerisation domain AGROH133_09123 PF01546 Peptidase family M20/M25/M40 AGROH133_09124 PF01266 FAD dependent oxidoreductase AGROH133_09125 PF00291 Pyridoxal-phosphate dependent enzyme AGROH133_09126 PF00920 Dehydratase family AGROH133_09127 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AGROH133_09127 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AGROH133_09128 PF01370 NAD dependent epimerase/dehydratase family AGROH133_09129 PF02913 FAD linked oxidases, C-terminal domain AGROH133_09129 PF01565 FAD binding domain AGROH133_09130 PF07729 FCD domain AGROH133_09130 PF00392 Bacterial regulatory proteins, gntR family AGROH133_09133 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AGROH133_09138 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AGROH133_09152 PF03480 Bacterial extracellular solute-binding protein, family 7 AGROH133_09154 PF16177 Acetyl-coenzyme A synthetase N-terminus AGROH133_09154 PF00501 AMP-binding enzyme AGROH133_09154 PF13193 AMP-binding enzyme C-terminal domain AGROH133_09157 PF01168 Alanine racemase, N-terminal domain AGROH133_09158 PF13603 Leucyl-tRNA synthetase, Domain 2 AGROH133_09158 PF08264 Anticodon-binding domain of tRNA AGROH133_09158 PF00133 tRNA synthetases class I (I, L, M and V) AGROH133_09162 PF11953 Domain of unknown function (DUF3470) AGROH133_09162 PF00037 4Fe-4S binding domain AGROH133_09163 PF01479 S4 domain AGROH133_09163 PF00579 tRNA synthetases class I (W and Y) AGROH133_09165 PF01494 FAD binding domain AGROH133_09167 PF00543 Nitrogen regulatory protein P-II AGROH133_09168 PF00909 Ammonium Transporter Family AGROH133_09182 PF01580 FtsK/SpoIIIE family AGROH133_09182 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AGROH133_09182 PF17854 FtsK alpha domain AGROH133_09182 PF09397 Ftsk gamma domain AGROH133_09190 PF03548 Outer membrane lipoprotein carrier protein LolA AGROH133_09193 PF00072 Response regulator receiver domain AGROH133_09193 PF00486 Transcriptional regulatory protein, C terminal AGROH133_09195 PF02559 CarD-like/TRCF domain AGROH133_09196 PF05088 Bacterial NAD-glutamate dehydrogenase AGROH133_09197 PF11700 Vacuole effluxer Atg22 like AGROH133_09210 PF05233 PHB accumulation regulatory domain AGROH133_09210 PF07879 PHB/PHA accumulation regulator DNA-binding domain AGROH133_09211 PF00108 Thiolase, N-terminal domain AGROH133_09211 PF02803 Thiolase, C-terminal domain AGROH133_09215 PF00210 Ferritin-like domain AGROH133_09216 PF00293 NUDIX domain AGROH133_09219 PF03572 Peptidase family S41 AGROH133_09219 PF13180 PDZ domain AGROH133_09225 PF02590 Predicted SPOUT methyltransferase AGROH133_09227 PF01467 Cytidylyltransferase-like AGROH133_09228 PF00171 Aldehyde dehydrogenase family AGROH133_09229 PF01472 PUA domain AGROH133_09229 PF00696 Amino acid kinase family AGROH133_09230 PF01926 50S ribosome-binding GTPase AGROH133_09230 PF01018 GTP1/OBG AGROH133_09231 PF13302 Acetyltransferase (GNAT) domain AGROH133_09233 PF01016 Ribosomal L27 protein AGROH133_09234 PF00829 Ribosomal prokaryotic L21 protein AGROH133_09237 PF03328 HpcH/HpaI aldolase/citrate lyase family AGROH133_09241 PF00694 Aconitase C-terminal domain AGROH133_09242 PF00180 Isocitrate/isopropylmalate dehydrogenase AGROH133_09243 PF03150 Di-haem cytochrome c peroxidase AGROH133_09245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AGROH133_09245 PF07685 CobB/CobQ-like glutamine amidotransferase domain AGROH133_09246 PF10414 Sirohaem synthase dimerisation region AGROH133_09246 PF14824 Sirohaem biosynthesis protein central AGROH133_09246 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AGROH133_09247 PF01888 CbiD AGROH133_09248 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AGROH133_09250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AGROH133_09251 PF02571 Precorrin-6x reductase CbiJ/CobK AGROH133_09252 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AGROH133_09254 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AGROH133_09255 PF02570 Precorrin-8X methylmutase AGROH133_09256 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AGROH133_09257 PF02514 CobN/Magnesium Chelatase AGROH133_09258 PF07683 Cobalamin synthesis protein cobW C-terminal domain AGROH133_09258 PF02492 CobW/HypB/UreG, nucleotide-binding domain AGROH133_09260 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AGROH133_09260 PF12557 Cob(I)alamin adenosyltransferase N terminal AGROH133_09261 PF07685 CobB/CobQ-like glutamine amidotransferase domain AGROH133_09261 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AGROH133_09262 PF03186 CobD/Cbib protein AGROH133_09267 PF00155 Aminotransferase class I and II AGROH133_09268 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AGROH133_09268 PF13378 Enolase C-terminal domain-like AGROH133_09269 PF05336 L-rhamnose mutarotase AGROH133_09270 PF08125 Mannitol dehydrogenase C-terminal domain AGROH133_09270 PF01232 Mannitol dehydrogenase Rossmann domain AGROH133_09271 PF00107 Zinc-binding dehydrogenase AGROH133_09271 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_09273 PF00248 Aldo/keto reductase family AGROH133_09276 PF02653 Branched-chain amino acid transport system / permease component AGROH133_09287 PF00005 ABC transporter AGROH133_09288 PF07729 FCD domain AGROH133_09288 PF00392 Bacterial regulatory proteins, gntR family AGROH133_09289 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AGROH133_09289 PF08666 SAF domain AGROH133_09290 PF02142 MGS-like domain AGROH133_09290 PF01808 AICARFT/IMPCHase bienzyme AGROH133_09292 PF01189 16S rRNA methyltransferase RsmB/F AGROH133_09292 PF01029 NusB family AGROH133_09293 PF01435 Peptidase family M48 AGROH133_09300 PF02195 ParB-like nuclease domain AGROH133_09300 PF17762 HTH domain found in ParB protein AGROH133_09302 PF13614 AAA domain AGROH133_09303 PF02527 rRNA small subunit methyltransferase G AGROH133_09304 PF13932 GidA associated domain AGROH133_09304 PF01134 Glucose inhibited division protein A AGROH133_09306 PF01926 50S ribosome-binding GTPase AGROH133_09306 PF12631 MnmE helical domain AGROH133_09306 PF10396 GTP-binding protein TrmE N-terminus AGROH133_09307 PF07498 Rho termination factor, N-terminal domain AGROH133_09307 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AGROH133_09307 PF07497 Rho termination factor, RNA-binding domain AGROH133_09308 PF03653 Uncharacterised protein family (UPF0093) AGROH133_09314 PF01208 Uroporphyrinogen decarboxylase (URO-D) AGROH133_09321 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AGROH133_09322 PF00565 Staphylococcal nuclease homologue AGROH133_09333 PF00665 Integrase core domain AGROH133_09335 PF01695 IstB-like ATP binding protein AGROH133_09340 PF02534 Type IV secretory system Conjugative DNA transfer AGROH133_09346 PF02371 Transposase IS116/IS110/IS902 family AGROH133_09346 PF01548 Transposase AGROH133_09348 PF01443 Viral (Superfamily 1) RNA helicase AGROH133_09348 PF03389 MobA/MobL family AGROH133_09348 PF17841 BID domain of Bartonella effector protein (Bep) AGROH133_09349 PF02308 MgtC family AGROH133_09369 PF06715 Gp5 C-terminal repeat (3 copies) AGROH133_09369 PF04717 Type VI secretion system, phage-baseplate injector AGROH133_09374 PF00004 ATPase family associated with various cellular activities (AAA) AGROH133_09374 PF07724 AAA domain (Cdc48 subfamily) AGROH133_09374 PF17871 AAA lid domain AGROH133_09374 PF10431 C-terminal, D2-small domain, of ClpB protein AGROH133_09376 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AGROH133_09377 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AGROH133_09381 PF05947 Type VI secretion system, TssF AGROH133_09384 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AGROH133_09385 PF00691 OmpA family AGROH133_09387 PF06761 Intracellular multiplication and human macrophage-killing AGROH133_09387 PF14331 ImcF-related N-terminal domain AGROH133_09387 PF06744 Type VI secretion protein IcmF C-terminal AGROH133_09393 PF02563 Polysaccharide biosynthesis/export protein AGROH133_09397 PF01037 Lrp/AsnC ligand binding domain AGROH133_09399 PF00171 Aldehyde dehydrogenase family AGROH133_09400 PF00202 Aminotransferase class-III AGROH133_09401 PF00392 Bacterial regulatory proteins, gntR family AGROH133_09401 PF00155 Aminotransferase class I and II AGROH133_09403 PF00291 Pyridoxal-phosphate dependent enzyme AGROH133_09404 PF02423 Ornithine cyclodeaminase/mu-crystallin family AGROH133_09405 PF01321 Creatinase/Prolidase N-terminal domain AGROH133_09405 PF00557 Metallopeptidase family M24 AGROH133_09406 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AGROH133_09407 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_09409 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09413 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09419 PF00005 ABC transporter AGROH133_09423 PF00440 Bacterial regulatory proteins, tetR family AGROH133_09427 PF08281 Sigma-70, region 4 AGROH133_09427 PF04542 Sigma-70 region 2 AGROH133_09452 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AGROH133_09453 PF13302 Acetyltransferase (GNAT) domain AGROH133_09457 PF00563 EAL domain AGROH133_09457 PF00360 Phytochrome region AGROH133_09457 PF01590 GAF domain AGROH133_09457 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_09473 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_09473 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AGROH133_09495 PF00199 Catalase AGROH133_09495 PF06628 Catalase-related immune-responsive AGROH133_09495 PF18011 C-terminal domain found in long catalases AGROH133_09497 PF12792 CSS motif domain associated with EAL AGROH133_09497 PF00563 EAL domain AGROH133_09503 PF00664 ABC transporter transmembrane region AGROH133_09503 PF00005 ABC transporter AGROH133_09509 PF03401 Tripartite tricarboxylate transporter family receptor AGROH133_09511 PF00196 Bacterial regulatory proteins, luxR family AGROH133_09511 PF00072 Response regulator receiver domain AGROH133_09513 PF05532 CsbD-like AGROH133_09519 PF00486 Transcriptional regulatory protein, C terminal AGROH133_09519 PF00072 Response regulator receiver domain AGROH133_09520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_09523 PF13673 Acetyltransferase (GNAT) domain AGROH133_09524 PF07690 Major Facilitator Superfamily AGROH133_09539 PF12838 4Fe-4S dicluster domain AGROH133_09539 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AGROH133_09539 PF00384 Molybdopterin oxidoreductase AGROH133_09539 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AGROH133_09539 PF01568 Molydopterin dinucleotide binding domain AGROH133_09540 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AGROH133_09540 PF00037 4Fe-4S binding domain AGROH133_09540 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AGROH133_09542 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_09542 PF03466 LysR substrate binding domain AGROH133_09544 PF01177 Asp/Glu/Hydantoin racemase AGROH133_09545 PF01613 Flavin reductase like domain AGROH133_09546 PF07729 FCD domain AGROH133_09546 PF00392 Bacterial regulatory proteins, gntR family AGROH133_09548 PF00005 ABC transporter AGROH133_09548 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_09549 PF00005 ABC transporter AGROH133_09549 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_09550 PF01979 Amidohydrolase family AGROH133_09551 PF01979 Amidohydrolase family AGROH133_09552 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09552 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_09559 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09567 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_09569 PF01979 Amidohydrolase family AGROH133_09570 PF02530 Porin subfamily AGROH133_09572 PF03707 Bacterial signalling protein N terminal repeat AGROH133_09572 PF00563 EAL domain AGROH133_09572 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_09573 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AGROH133_09573 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AGROH133_09574 PF00005 ABC transporter AGROH133_09575 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09580 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09585 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_09588 PF00356 Bacterial regulatory proteins, lacI family AGROH133_09590 PF05544 Proline racemase AGROH133_09592 PF01266 FAD dependent oxidoreductase AGROH133_09595 PF00005 ABC transporter AGROH133_09596 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09600 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09610 PF02615 Malate/L-lactate dehydrogenase AGROH133_09611 PF00701 Dihydrodipicolinate synthetase family AGROH133_09612 PF00392 Bacterial regulatory proteins, gntR family AGROH133_09612 PF07729 FCD domain AGROH133_09613 PF00091 Tubulin/FtsZ family, GTPase domain AGROH133_09613 PF12327 FtsZ family, C-terminal domain AGROH133_09614 PF00072 Response regulator receiver domain AGROH133_09618 PF02056 Family 4 glycosyl hydrolase AGROH133_09618 PF11975 Family 4 glycosyl hydrolase C-terminal domain AGROH133_09619 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_09619 PF00005 ABC transporter AGROH133_09620 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_09620 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09627 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_09638 PF02056 Family 4 glycosyl hydrolase AGROH133_09638 PF11975 Family 4 glycosyl hydrolase C-terminal domain AGROH133_09657 PF00480 ROK family AGROH133_09659 PF13416 Bacterial extracellular solute-binding protein AGROH133_09661 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09669 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09676 PF00206 Lyase AGROH133_09676 PF14698 Argininosuccinate lyase C-terminal AGROH133_09677 PF00005 ABC transporter AGROH133_09677 PF08402 TOBE domain AGROH133_09678 PF00294 pfkB family carbohydrate kinase AGROH133_09679 PF12411 Choline sulfatase enzyme C terminal AGROH133_09679 PF00884 Sulfatase AGROH133_09680 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AGROH133_09682 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_09682 PF03466 LysR substrate binding domain AGROH133_09684 PF00171 Aldehyde dehydrogenase family AGROH133_09687 PF12833 Helix-turn-helix domain AGROH133_09687 PF10114 Sensory domain found in PocR AGROH133_09694 PF01638 HxlR-like helix-turn-helix AGROH133_09695 PF00005 ABC transporter AGROH133_09696 PF01032 FecCD transport family AGROH133_09707 PF01032 FecCD transport family AGROH133_09719 PF07715 TonB-dependent Receptor Plug Domain AGROH133_09719 PF00593 TonB dependent receptor AGROH133_09721 PF12833 Helix-turn-helix domain AGROH133_09724 PF00141 Peroxidase AGROH133_09725 PF03466 LysR substrate binding domain AGROH133_09725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_09728 PF00672 HAMP domain AGROH133_09728 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_09728 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_09731 PF00072 Response regulator receiver domain AGROH133_09731 PF00486 Transcriptional regulatory protein, C terminal AGROH133_09732 PF13533 Biotin-lipoyl like AGROH133_09734 PF00873 AcrB/AcrD/AcrF family AGROH133_09746 PF01865 Protein of unknown function DUF47 AGROH133_09747 PF01384 Phosphate transporter family AGROH133_09756 PF02735 Ku70/Ku80 beta-barrel domain AGROH133_09757 PF04679 ATP dependent DNA ligase C terminal region AGROH133_09757 PF01068 ATP dependent DNA ligase domain AGROH133_09757 PF13298 DNA polymerase Ligase (LigD) AGROH133_09758 PF02735 Ku70/Ku80 beta-barrel domain AGROH133_09761 PF00563 EAL domain AGROH133_09761 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_09761 PF03707 Bacterial signalling protein N terminal repeat AGROH133_09761 PF13188 PAS domain AGROH133_09773 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_09775 PF03786 D-mannonate dehydratase (UxuA) AGROH133_09776 PF00392 Bacterial regulatory proteins, gntR family AGROH133_09776 PF07729 FCD domain AGROH133_09777 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09784 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_09784 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09791 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_09791 PF00005 ABC transporter AGROH133_09792 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_09792 PF00005 ABC transporter AGROH133_09793 PF00005 ABC transporter AGROH133_09793 PF03459 TOBE domain AGROH133_09793 PF17912 MalK OB fold domain AGROH133_09794 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09801 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09811 PF01593 Flavin containing amine oxidoreductase AGROH133_09813 PF00356 Bacterial regulatory proteins, lacI family AGROH133_09817 PF13361 UvrD-like helicase C-terminal domain AGROH133_09817 PF00580 UvrD/REP helicase N-terminal domain AGROH133_09818 PF11799 impB/mucB/samB family C-terminal domain AGROH133_09818 PF00817 impB/mucB/samB family AGROH133_09819 PF07715 TonB-dependent Receptor Plug Domain AGROH133_09821 PF00005 ABC transporter AGROH133_09822 PF01032 FecCD transport family AGROH133_09832 PF01032 FecCD transport family AGROH133_09848 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AGROH133_09849 PF16363 GDP-mannose 4,6 dehydratase AGROH133_09850 PF04321 RmlD substrate binding domain AGROH133_09851 PF00483 Nucleotidyl transferase AGROH133_09853 PF01370 NAD dependent epimerase/dehydratase family AGROH133_09854 PF08241 Methyltransferase domain AGROH133_09855 PF08241 Methyltransferase domain AGROH133_09862 PF00106 short chain dehydrogenase AGROH133_09863 PF04030 D-arabinono-1,4-lactone oxidase AGROH133_09863 PF01565 FAD binding domain AGROH133_09864 PF01040 UbiA prenyltransferase family AGROH133_09886 PF08241 Methyltransferase domain AGROH133_09918 PF00456 Transketolase, thiamine diphosphate binding domain AGROH133_09919 PF02779 Transketolase, pyrimidine binding domain AGROH133_09919 PF02780 Transketolase, C-terminal domain AGROH133_09920 PF00535 Glycosyl transferase family 2 AGROH133_09923 PF01527 Transposase AGROH133_09925 PF02371 Transposase IS116/IS110/IS902 family AGROH133_09925 PF01548 Transposase AGROH133_09926 PF13683 Integrase core domain AGROH133_09926 PF13276 HTH-like domain AGROH133_09927 PF13683 Integrase core domain AGROH133_09927 PF13276 HTH-like domain AGROH133_09928 PF00005 ABC transporter AGROH133_09928 PF00664 ABC transporter transmembrane region AGROH133_09935 PF00005 ABC transporter AGROH133_09936 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_09946 PF01557 Fumarylacetoacetate (FAA) hydrolase family AGROH133_09948 PF01758 Sodium Bile acid symporter family AGROH133_09959 PF02371 Transposase IS116/IS110/IS902 family AGROH133_09959 PF01548 Transposase AGROH133_09961 PF03389 MobA/MobL family AGROH133_09961 PF17841 BID domain of Bartonella effector protein (Bep) AGROH133_09961 PF01443 Viral (Superfamily 1) RNA helicase AGROH133_09973 PF12705 PD-(D/E)XK nuclease superfamily AGROH133_09973 PF00580 UvrD/REP helicase N-terminal domain AGROH133_09973 PF13361 UvrD-like helicase C-terminal domain AGROH133_09974 PF07728 AAA domain (dynein-related subfamily) AGROH133_09974 PF12102 Domain of unknown function (DUF3578) AGROH133_09978 PF01555 DNA methylase AGROH133_09983 PF07690 Major Facilitator Superfamily AGROH133_10007 PF00578 AhpC/TSA family AGROH133_10007 PF02683 Cytochrome C biogenesis protein transmembrane region AGROH133_10007 PF17991 Thioredoxin like C-terminal domain AGROH133_10016 PF00561 alpha/beta hydrolase fold AGROH133_10019 PF00072 Response regulator receiver domain AGROH133_10019 PF00486 Transcriptional regulatory protein, C terminal AGROH133_10020 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_10020 PF00672 HAMP domain AGROH133_10020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_10026 PF00664 ABC transporter transmembrane region AGROH133_10026 PF00005 ABC transporter AGROH133_10026 PF03412 Peptidase C39 family AGROH133_10032 PF06594 Haemolysin-type calcium binding protein related domain AGROH133_10032 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AGROH133_10038 PF02566 OsmC-like protein AGROH133_10041 PF04199 Putative cyclase AGROH133_10044 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AGROH133_10061 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AGROH133_10061 PF03480 Bacterial extracellular solute-binding protein, family 7 AGROH133_10064 PF01614 Bacterial transcriptional regulator AGROH133_10064 PF09339 IclR helix-turn-helix domain AGROH133_10066 PF13193 AMP-binding enzyme C-terminal domain AGROH133_10066 PF00501 AMP-binding enzyme AGROH133_10071 PF01037 Lrp/AsnC ligand binding domain AGROH133_10073 PF02538 Hydantoinase B/oxoprolinase AGROH133_10074 PF05378 Hydantoinase/oxoprolinase N-terminal region AGROH133_10074 PF01968 Hydantoinase/oxoprolinase AGROH133_10080 PF05378 Hydantoinase/oxoprolinase N-terminal region AGROH133_10080 PF01968 Hydantoinase/oxoprolinase AGROH133_10081 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_10083 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10091 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_10091 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10099 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_10099 PF00005 ABC transporter AGROH133_10100 PF01266 FAD dependent oxidoreductase AGROH133_10101 PF00206 Lyase AGROH133_10101 PF10415 Fumarase C C-terminus AGROH133_10102 PF01266 FAD dependent oxidoreductase AGROH133_10103 PF00005 ABC transporter AGROH133_10104 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10112 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10117 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_10122 PF00106 short chain dehydrogenase AGROH133_10122 PF00300 Histidine phosphatase superfamily (branch 1) AGROH133_10123 PF01266 FAD dependent oxidoreductase AGROH133_10124 PF07729 FCD domain AGROH133_10124 PF00392 Bacterial regulatory proteins, gntR family AGROH133_10125 PF17912 MalK OB fold domain AGROH133_10125 PF00005 ABC transporter AGROH133_10126 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10133 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10140 PF01547 Bacterial extracellular solute-binding protein AGROH133_10142 PF16889 Heparinase II/III N-terminus AGROH133_10142 PF07940 Heparinase II/III-like protein AGROH133_10146 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AGROH133_10146 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AGROH133_10148 PF13378 Enolase C-terminal domain-like AGROH133_10148 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AGROH133_10150 PF00011 Hsp20/alpha crystallin family AGROH133_10152 PF00534 Glycosyl transferases group 1 AGROH133_10152 PF13439 Glycosyltransferase Family 4 AGROH133_10153 PF13439 Glycosyltransferase Family 4 AGROH133_10153 PF00534 Glycosyl transferases group 1 AGROH133_10169 PF00953 Glycosyl transferase family 4 AGROH133_10181 PF13439 Glycosyltransferase Family 4 AGROH133_10181 PF00534 Glycosyl transferases group 1 AGROH133_10197 PF01739 CheR methyltransferase, SAM binding domain AGROH133_10197 PF08448 PAS fold AGROH133_10197 PF01339 CheB methylesterase AGROH133_10197 PF03705 CheR methyltransferase, all-alpha domain AGROH133_10198 PF00072 Response regulator receiver domain AGROH133_10198 PF00196 Bacterial regulatory proteins, luxR family AGROH133_10201 PF00202 Aminotransferase class-III AGROH133_10202 PF01370 NAD dependent epimerase/dehydratase family AGROH133_10203 PF16254 Domain of unknown function (DUF4910) AGROH133_10203 PF09940 Domain of unknown function (DUF2172) AGROH133_10203 PF16221 winged helix-turn-helix AGROH133_10204 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AGROH133_10205 PF08421 Putative zinc binding domain AGROH133_10205 PF08484 C-methyltransferase C-terminal domain AGROH133_10206 PF00483 Nucleotidyl transferase AGROH133_10207 PF02585 GlcNAc-PI de-N-acetylase AGROH133_10208 PF00072 Response regulator receiver domain AGROH133_10208 PF00196 Bacterial regulatory proteins, luxR family AGROH133_10214 PF12708 Pectate lyase superfamily protein AGROH133_10214 PF13229 Right handed beta helix region AGROH133_10214 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AGROH133_10217 PF01370 NAD dependent epimerase/dehydratase family AGROH133_10218 PF16363 GDP-mannose 4,6 dehydratase AGROH133_10220 PF03466 LysR substrate binding domain AGROH133_10220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_10222 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AGROH133_10223 PF07690 Major Facilitator Superfamily AGROH133_10241 PF06472 ABC transporter transmembrane region 2 AGROH133_10241 PF00005 ABC transporter AGROH133_10247 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_10252 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AGROH133_10252 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AGROH133_10253 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AGROH133_10253 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AGROH133_10254 PF09137 Glucodextranase, domain N AGROH133_10254 PF00723 Glycosyl hydrolases family 15 AGROH133_10256 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AGROH133_10256 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AGROH133_10257 PF04324 BFD-like [2Fe-2S] binding domain AGROH133_10257 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_10258 PF01266 FAD dependent oxidoreductase AGROH133_10258 PF04324 BFD-like [2Fe-2S] binding domain AGROH133_10259 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AGROH133_10260 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AGROH133_10261 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10269 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10276 PF00005 ABC transporter AGROH133_10276 PF08402 TOBE domain AGROH133_10280 PF00795 Carbon-nitrogen hydrolase AGROH133_10281 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_10281 PF03466 LysR substrate binding domain AGROH133_10284 PF01266 FAD dependent oxidoreductase AGROH133_10285 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10285 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_10292 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_10303 PF01266 FAD dependent oxidoreductase AGROH133_10304 PF00300 Histidine phosphatase superfamily (branch 1) AGROH133_10304 PF00106 short chain dehydrogenase AGROH133_10306 PF00005 ABC transporter AGROH133_10306 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_10309 PF01037 Lrp/AsnC ligand binding domain AGROH133_10311 PF01053 Cys/Met metabolism PLP-dependent enzyme AGROH133_10313 PF07690 Major Facilitator Superfamily AGROH133_10329 PF03466 LysR substrate binding domain AGROH133_10329 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_10337 PF03466 LysR substrate binding domain AGROH133_10337 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_10343 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_10345 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10353 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_10353 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10360 PF00005 ABC transporter AGROH133_10360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_10361 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AGROH133_10361 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AGROH133_10361 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal AGROH133_10363 PF00313 'Cold-shock' DNA-binding domain AGROH133_10365 PF00072 Response regulator receiver domain AGROH133_10365 PF00158 Sigma-54 interaction domain AGROH133_10365 PF02954 Bacterial regulatory protein, Fis family AGROH133_10366 PF00072 Response regulator receiver domain AGROH133_10367 PF01627 Hpt domain AGROH133_10367 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_10367 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_10367 PF18415 Histidine kinase receptor ArcB trans-membrane domain AGROH133_10367 PF00072 Response regulator receiver domain AGROH133_10367 PF00989 PAS fold AGROH133_10370 PF00005 ABC transporter AGROH133_10370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_10372 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_10372 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10380 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10388 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_10391 PF00392 Bacterial regulatory proteins, gntR family AGROH133_10391 PF07729 FCD domain AGROH133_10393 PF00144 Beta-lactamase AGROH133_10395 PF03466 LysR substrate binding domain AGROH133_10395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_10416 PF04542 Sigma-70 region 2 AGROH133_10416 PF08281 Sigma-70, region 4 AGROH133_10417 PF01177 Asp/Glu/Hydantoin racemase AGROH133_10418 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10426 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10438 PF00005 ABC transporter AGROH133_10439 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10445 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10450 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_10452 PF00392 Bacterial regulatory proteins, gntR family AGROH133_10452 PF07729 FCD domain AGROH133_10454 PF00743 Flavin-binding monooxygenase-like AGROH133_10455 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_10455 PF00107 Zinc-binding dehydrogenase AGROH133_10456 PF00158 Sigma-54 interaction domain AGROH133_10456 PF01590 GAF domain AGROH133_10456 PF02954 Bacterial regulatory protein, Fis family AGROH133_10461 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_10461 PF08447 PAS fold AGROH133_10461 PF13426 PAS domain AGROH133_10463 PF13416 Bacterial extracellular solute-binding protein AGROH133_10466 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10473 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10481 PF17912 MalK OB fold domain AGROH133_10481 PF00005 ABC transporter AGROH133_10482 PF00296 Luciferase-like monooxygenase AGROH133_10483 PF09084 NMT1/THI5 like AGROH133_10485 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10492 PF00005 ABC transporter AGROH133_10493 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10500 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10509 PF17912 MalK OB fold domain AGROH133_10509 PF00005 ABC transporter AGROH133_10510 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AGROH133_10516 PF00356 Bacterial regulatory proteins, lacI family AGROH133_10519 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AGROH133_10519 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AGROH133_10519 PF01842 ACT domain AGROH133_10520 PF01261 Xylose isomerase-like TIM barrel AGROH133_10521 PF00005 ABC transporter AGROH133_10521 PF03459 TOBE domain AGROH133_10521 PF17912 MalK OB fold domain AGROH133_10522 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10529 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10537 PF13416 Bacterial extracellular solute-binding protein AGROH133_10539 PF17938 Tetracyclin repressor-like, C-terminal domain AGROH133_10539 PF00440 Bacterial regulatory proteins, tetR family AGROH133_10541 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_10541 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_10544 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_10544 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_10548 PF00313 'Cold-shock' DNA-binding domain AGROH133_10550 PF01165 Ribosomal protein S21 AGROH133_10570 PF00550 Phosphopantetheine attachment site AGROH133_10571 PF00005 ABC transporter AGROH133_10571 PF02687 FtsX-like permease family AGROH133_10571 PF12704 MacB-like periplasmic core domain AGROH133_10576 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AGROH133_10586 PF00072 Response regulator receiver domain AGROH133_10586 PF00486 Transcriptional regulatory protein, C terminal AGROH133_10587 PF00672 HAMP domain AGROH133_10587 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_10587 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_10591 PF07470 Glycosyl Hydrolase Family 88 AGROH133_10592 PF00295 Glycosyl hydrolases family 28 AGROH133_10596 PF08402 TOBE domain AGROH133_10596 PF00005 ABC transporter AGROH133_10597 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10604 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10611 PF02311 AraC-like ligand binding domain AGROH133_10611 PF12833 Helix-turn-helix domain AGROH133_10612 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AGROH133_10629 PF03480 Bacterial extracellular solute-binding protein, family 7 AGROH133_10631 PF04909 Amidohydrolase AGROH133_10632 PF13378 Enolase C-terminal domain-like AGROH133_10632 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AGROH133_10633 PF00701 Dihydrodipicolinate synthetase family AGROH133_10635 PF04962 KduI/IolB family AGROH133_10636 PF01370 NAD dependent epimerase/dehydratase family AGROH133_10637 PF00392 Bacterial regulatory proteins, gntR family AGROH133_10637 PF07729 FCD domain AGROH133_10641 PF00248 Aldo/keto reductase family AGROH133_10642 PF00005 ABC transporter AGROH133_10642 PF17912 MalK OB fold domain AGROH133_10643 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10650 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10660 PF02311 AraC-like ligand binding domain AGROH133_10660 PF12833 Helix-turn-helix domain AGROH133_10662 PF07690 Major Facilitator Superfamily AGROH133_10673 PF03466 LysR substrate binding domain AGROH133_10673 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_10675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AGROH133_10693 PF03480 Bacterial extracellular solute-binding protein, family 7 AGROH133_10695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AGROH133_10695 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AGROH133_10698 PF00356 Bacterial regulatory proteins, lacI family AGROH133_10700 PF16912 Glucose dehydrogenase C-terminus AGROH133_10700 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_10705 PF00294 pfkB family carbohydrate kinase AGROH133_10706 PF08013 Tagatose 6 phosphate kinase AGROH133_10707 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10714 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10722 PF00005 ABC transporter AGROH133_10722 PF08402 TOBE domain AGROH133_10723 PF00005 ABC transporter AGROH133_10723 PF17912 MalK OB fold domain AGROH133_10724 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10731 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10738 PF01547 Bacterial extracellular solute-binding protein AGROH133_10740 PF01053 Cys/Met metabolism PLP-dependent enzyme AGROH133_10742 PF01297 Zinc-uptake complex component A periplasmic AGROH133_10744 PF00950 ABC 3 transport family AGROH133_10754 PF00005 ABC transporter AGROH133_10755 PF07683 Cobalamin synthesis protein cobW C-terminal domain AGROH133_10755 PF02492 CobW/HypB/UreG, nucleotide-binding domain AGROH133_10762 PF02492 CobW/HypB/UreG, nucleotide-binding domain AGROH133_10762 PF07683 Cobalamin synthesis protein cobW C-terminal domain AGROH133_10763 PF13416 Bacterial extracellular solute-binding protein AGROH133_10765 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10773 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10780 PF00005 ABC transporter AGROH133_10780 PF08402 TOBE domain AGROH133_10793 PF03922 OmpW family AGROH133_10816 PF00679 Elongation factor G C-terminus AGROH133_10816 PF03764 Elongation factor G, domain IV AGROH133_10816 PF00009 Elongation factor Tu GTP binding domain AGROH133_10817 PF02423 Ornithine cyclodeaminase/mu-crystallin family AGROH133_10823 PF00583 Acetyltransferase (GNAT) family AGROH133_10824 PF12146 Serine aminopeptidase, S33 AGROH133_10827 PF01336 OB-fold nucleic acid binding domain AGROH133_10827 PF00152 tRNA synthetases class II (D, K and N) AGROH133_10835 PF01527 Transposase AGROH133_10838 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AGROH133_10838 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AGROH133_10839 PF03466 LysR substrate binding domain AGROH133_10839 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_10841 PF13407 Periplasmic binding protein domain AGROH133_10844 PF02653 Branched-chain amino acid transport system / permease component AGROH133_10854 PF00005 ABC transporter AGROH133_10855 PF00563 EAL domain AGROH133_10855 PF05231 MASE1 AGROH133_10855 PF08447 PAS fold AGROH133_10855 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_10855 PF08448 PAS fold AGROH133_10855 PF13426 PAS domain AGROH133_10856 PF05899 Protein of unknown function (DUF861) AGROH133_10856 PF07883 Cupin domain AGROH133_10858 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_10858 PF08447 PAS fold AGROH133_10858 PF08448 PAS fold AGROH133_10858 PF00563 EAL domain AGROH133_10864 PF02615 Malate/L-lactate dehydrogenase AGROH133_10865 PF17854 FtsK alpha domain AGROH133_10865 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AGROH133_10865 PF01580 FtsK/SpoIIIE family AGROH133_10865 PF09397 Ftsk gamma domain AGROH133_10866 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_10868 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10876 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10876 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_10883 PF00005 ABC transporter AGROH133_10883 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_10884 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_10884 PF00005 ABC transporter AGROH133_10885 PF00266 Aminotransferase class-V AGROH133_10887 PF00920 Dehydratase family AGROH133_10888 PF13407 Periplasmic binding protein domain AGROH133_10890 PF00005 ABC transporter AGROH133_10891 PF02653 Branched-chain amino acid transport system / permease component AGROH133_10902 PF02653 Branched-chain amino acid transport system / permease component AGROH133_10912 PF07729 FCD domain AGROH133_10912 PF00392 Bacterial regulatory proteins, gntR family AGROH133_10913 PF07690 Major Facilitator Superfamily AGROH133_10927 PF07733 Bacterial DNA polymerase III alpha NTPase domain AGROH133_10927 PF01336 OB-fold nucleic acid binding domain AGROH133_10927 PF02811 PHP domain AGROH133_10927 PF14579 Helix-hairpin-helix motif AGROH133_10927 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AGROH133_10936 PF05161 MOFRL family AGROH133_10936 PF13660 Domain of unknown function (DUF4147) AGROH133_10938 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_10938 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_10940 PF03459 TOBE domain AGROH133_10940 PF17912 MalK OB fold domain AGROH133_10940 PF00005 ABC transporter AGROH133_10941 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10948 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_10955 PF01547 Bacterial extracellular solute-binding protein AGROH133_10958 PF00480 ROK family AGROH133_10958 PF01047 MarR family AGROH133_10960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_10962 PF01425 Amidase AGROH133_10964 PF08447 PAS fold AGROH133_10964 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_10964 PF08448 PAS fold AGROH133_10964 PF00563 EAL domain AGROH133_10971 PF03776 Septum formation topological specificity factor MinE AGROH133_10972 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AGROH133_10973 PF03775 Septum formation inhibitor MinC, C-terminal domain AGROH133_10973 PF05209 Septum formation inhibitor MinC, N-terminal domain AGROH133_10974 PF13419 Haloacid dehalogenase-like hydrolase AGROH133_10975 PF00392 Bacterial regulatory proteins, gntR family AGROH133_10975 PF07729 FCD domain AGROH133_10977 PF03480 Bacterial extracellular solute-binding protein, family 7 AGROH133_10984 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AGROH133_10999 PF00107 Zinc-binding dehydrogenase AGROH133_10999 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_11000 PF03786 D-mannonate dehydratase (UxuA) AGROH133_11005 PF00171 Aldehyde dehydrogenase family AGROH133_11006 PF03480 Bacterial extracellular solute-binding protein, family 7 AGROH133_11008 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AGROH133_11008 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AGROH133_11026 PF00296 Luciferase-like monooxygenase AGROH133_11029 PF00043 Glutathione S-transferase, C-terminal domain AGROH133_11029 PF02798 Glutathione S-transferase, N-terminal domain AGROH133_11030 PF00005 ABC transporter AGROH133_11030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_11031 PF03841 L-seryl-tRNA selenium transferase AGROH133_11035 PF01979 Amidohydrolase family AGROH133_11036 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11036 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_11043 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11051 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_11054 PF13439 Glycosyltransferase Family 4 AGROH133_11054 PF00534 Glycosyl transferases group 1 AGROH133_11058 PF02563 Polysaccharide biosynthesis/export protein AGROH133_11060 PF13533 Biotin-lipoyl like AGROH133_11062 PF00873 AcrB/AcrD/AcrF family AGROH133_11079 PF01613 Flavin reductase like domain AGROH133_11080 PF00248 Aldo/keto reductase family AGROH133_11081 PF00296 Luciferase-like monooxygenase AGROH133_11082 PF00392 Bacterial regulatory proteins, gntR family AGROH133_11082 PF07702 UTRA domain AGROH133_11084 PF00005 ABC transporter AGROH133_11084 PF08402 TOBE domain AGROH133_11085 PF01547 Bacterial extracellular solute-binding protein AGROH133_11087 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11094 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11101 PF01055 Glycosyl hydrolases family 31 AGROH133_11104 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11111 PF09084 NMT1/THI5 like AGROH133_11113 PF02110 Hydroxyethylthiazole kinase family AGROH133_11114 PF02581 Thiamine monophosphate synthase AGROH133_11115 PF08543 Phosphomethylpyrimidine kinase AGROH133_11116 PF01037 Lrp/AsnC ligand binding domain AGROH133_11117 PF01168 Alanine racemase, N-terminal domain AGROH133_11117 PF00842 Alanine racemase, C-terminal domain AGROH133_11118 PF01266 FAD dependent oxidoreductase AGROH133_11125 PF00158 Sigma-54 interaction domain AGROH133_11125 PF02954 Bacterial regulatory protein, Fis family AGROH133_11125 PF00072 Response regulator receiver domain AGROH133_11126 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_11126 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_11128 PF00375 Sodium:dicarboxylate symporter family AGROH133_11138 PF00892 EamA-like transporter family AGROH133_11145 PF00202 Aminotransferase class-III AGROH133_11148 PF07687 Peptidase dimerisation domain AGROH133_11148 PF01546 Peptidase family M20/M25/M40 AGROH133_11151 PF01270 Glycosyl hydrolases family 8 AGROH133_11158 PF07238 PilZ domain AGROH133_11158 PF00535 Glycosyl transferase family 2 AGROH133_11184 PF16363 GDP-mannose 4,6 dehydratase AGROH133_11185 PF16363 GDP-mannose 4,6 dehydratase AGROH133_11189 PF00196 Bacterial regulatory proteins, luxR family AGROH133_11194 PF00005 ABC transporter AGROH133_11194 PF00664 ABC transporter transmembrane region AGROH133_11200 PF00529 HlyD membrane-fusion protein of T1SS AGROH133_11216 PF02563 Polysaccharide biosynthesis/export protein AGROH133_11220 PF02397 Bacterial sugar transferase AGROH133_11225 PF00202 Aminotransferase class-III AGROH133_11226 PF00672 HAMP domain AGROH133_11226 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_11229 PF17969 L,D-transpeptidase C-terminal domain AGROH133_11229 PF03734 L,D-transpeptidase catalytic domain AGROH133_11234 PF02245 Methylpurine-DNA glycosylase (MPG) AGROH133_11237 PF00356 Bacterial regulatory proteins, lacI family AGROH133_11239 PF01547 Bacterial extracellular solute-binding protein AGROH133_11241 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11248 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11255 PF17912 MalK OB fold domain AGROH133_11255 PF03459 TOBE domain AGROH133_11255 PF00005 ABC transporter AGROH133_11257 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_11257 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_11258 PF04055 Radical SAM superfamily AGROH133_11259 PF01242 6-pyruvoyl tetrahydropterin synthase AGROH133_11260 PF06508 Queuosine biosynthesis protein QueC AGROH133_11266 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_11266 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_11268 PF00005 ABC transporter AGROH133_11268 PF17912 MalK OB fold domain AGROH133_11269 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11276 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11283 PF01547 Bacterial extracellular solute-binding protein AGROH133_11290 PF01050 Mannose-6-phosphate isomerase AGROH133_11290 PF00483 Nucleotidyl transferase AGROH133_11291 PF01011 PQQ enzyme repeat AGROH133_11298 PF03466 LysR substrate binding domain AGROH133_11298 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_11300 PF03949 Malic enzyme, NAD binding domain AGROH133_11300 PF00390 Malic enzyme, N-terminal domain AGROH133_11300 PF01515 Phosphate acetyl/butaryl transferase AGROH133_11301 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_11303 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11309 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11315 PF00005 ABC transporter AGROH133_11316 PF03972 MmgE/PrpD family AGROH133_11317 PF00296 Luciferase-like monooxygenase AGROH133_11318 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_11318 PF08447 PAS fold AGROH133_11318 PF13426 PAS domain AGROH133_11320 PF01266 FAD dependent oxidoreductase AGROH133_11326 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AGROH133_11331 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AGROH133_11344 PF03480 Bacterial extracellular solute-binding protein, family 7 AGROH133_11346 PF07722 Peptidase C26 AGROH133_11347 PF02653 Branched-chain amino acid transport system / permease component AGROH133_11356 PF00005 ABC transporter AGROH133_11357 PF13407 Periplasmic binding protein domain AGROH133_11359 PF01546 Peptidase family M20/M25/M40 AGROH133_11360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_11364 PF00005 ABC transporter AGROH133_11364 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_11365 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11365 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_11372 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_11380 PF03466 LysR substrate binding domain AGROH133_11382 PF01112 Asparaginase AGROH133_11385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_11389 PF00005 ABC transporter AGROH133_11389 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_11390 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_11390 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11397 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11405 PF00072 Response regulator receiver domain AGROH133_11405 PF00196 Bacterial regulatory proteins, luxR family AGROH133_11407 PF00529 HlyD membrane-fusion protein of T1SS AGROH133_11407 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AGROH133_11410 PF00005 ABC transporter AGROH133_11410 PF00664 ABC transporter transmembrane region AGROH133_11418 PF08281 Sigma-70, region 4 AGROH133_11418 PF12680 SnoaL-like domain AGROH133_11418 PF04542 Sigma-70 region 2 AGROH133_11420 PF00005 ABC transporter AGROH133_11421 PF01032 FecCD transport family AGROH133_11435 PF01209 ubiE/COQ5 methyltransferase family AGROH133_11436 PF00127 Copper binding proteins, plastocyanin/azurin family AGROH133_11437 PF00005 ABC transporter AGROH133_11438 PF01032 FecCD transport family AGROH133_11454 PF01546 Peptidase family M20/M25/M40 AGROH133_11454 PF07687 Peptidase dimerisation domain AGROH133_11455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AGROH133_11457 PF00171 Aldehyde dehydrogenase family AGROH133_11458 PF00180 Isocitrate/isopropylmalate dehydrogenase AGROH133_11459 PF00171 Aldehyde dehydrogenase family AGROH133_11460 PF01266 FAD dependent oxidoreductase AGROH133_11463 PF00202 Aminotransferase class-III AGROH133_11466 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_11471 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11479 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_11479 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11486 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_11486 PF00005 ABC transporter AGROH133_11487 PF01037 Lrp/AsnC ligand binding domain AGROH133_11488 PF01266 FAD dependent oxidoreductase AGROH133_11493 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_11496 PF00005 ABC transporter AGROH133_11503 PF07687 Peptidase dimerisation domain AGROH133_11503 PF01546 Peptidase family M20/M25/M40 AGROH133_11504 PF00296 Luciferase-like monooxygenase AGROH133_11505 PF00296 Luciferase-like monooxygenase AGROH133_11506 PF02082 Transcriptional regulator AGROH133_11508 PF01613 Flavin reductase like domain AGROH133_11509 PF00296 Luciferase-like monooxygenase AGROH133_11512 PF00296 Luciferase-like monooxygenase AGROH133_11513 PF02770 Acyl-CoA dehydrogenase, middle domain AGROH133_11513 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AGROH133_11513 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AGROH133_11515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_11517 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11525 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11531 PF00005 ABC transporter AGROH133_11531 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_11532 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_11532 PF00005 ABC transporter AGROH133_11533 PF00248 Aldo/keto reductase family AGROH133_11535 PF03466 LysR substrate binding domain AGROH133_11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_11537 PF00296 Luciferase-like monooxygenase AGROH133_11541 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_11544 PF07687 Peptidase dimerisation domain AGROH133_11544 PF01546 Peptidase family M20/M25/M40 AGROH133_11545 PF00296 Luciferase-like monooxygenase AGROH133_11546 PF05368 NmrA-like family AGROH133_11549 PF00296 Luciferase-like monooxygenase AGROH133_11550 PF00296 Luciferase-like monooxygenase AGROH133_11551 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AGROH133_11551 PF13378 Enolase C-terminal domain-like AGROH133_11553 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_11555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_11555 PF00005 ABC transporter AGROH133_11556 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_11556 PF00005 ABC transporter AGROH133_11557 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_11557 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11564 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11581 PF00392 Bacterial regulatory proteins, gntR family AGROH133_11581 PF07729 FCD domain AGROH133_11583 PF00561 alpha/beta hydrolase fold AGROH133_11584 PF00106 short chain dehydrogenase AGROH133_11592 PF00753 Metallo-beta-lactamase superfamily AGROH133_11592 PF04273 Putative phosphatase (DUF442) AGROH133_11594 PF04143 Sulphur transport AGROH133_11606 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AGROH133_11606 PF01676 Metalloenzyme superfamily AGROH133_11607 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AGROH133_11607 PF02817 e3 binding domain AGROH133_11607 PF00364 Biotin-requiring enzyme AGROH133_11608 PF02780 Transketolase, C-terminal domain AGROH133_11608 PF02779 Transketolase, pyrimidine binding domain AGROH133_11609 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal AGROH133_11609 PF00676 Dehydrogenase E1 component AGROH133_11610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AGROH133_11610 PF02770 Acyl-CoA dehydrogenase, middle domain AGROH133_11610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AGROH133_11611 PF02803 Thiolase, C-terminal domain AGROH133_11611 PF00108 Thiolase, N-terminal domain AGROH133_11612 PF01037 Lrp/AsnC ligand binding domain AGROH133_11613 PF02770 Acyl-CoA dehydrogenase, middle domain AGROH133_11613 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AGROH133_11613 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AGROH133_11614 PF01039 Carboxyl transferase domain AGROH133_11615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AGROH133_11615 PF00364 Biotin-requiring enzyme AGROH133_11615 PF00289 Biotin carboxylase, N-terminal domain AGROH133_11615 PF02785 Biotin carboxylase C-terminal domain AGROH133_11616 PF00682 HMGL-like AGROH133_11617 PF00378 Enoyl-CoA hydratase/isomerase AGROH133_11618 PF02569 Pantoate-beta-alanine ligase AGROH133_11619 PF02548 Ketopantoate hydroxymethyltransferase AGROH133_11620 PF01261 Xylose isomerase-like TIM barrel AGROH133_11621 PF00596 Class II Aldolase and Adducin N-terminal domain AGROH133_11622 PF08220 DeoR-like helix-turn-helix domain AGROH133_11622 PF00455 DeoR C terminal sensor domain AGROH133_11624 PF13407 Periplasmic binding protein domain AGROH133_11627 PF00005 ABC transporter AGROH133_11628 PF02653 Branched-chain amino acid transport system / permease component AGROH133_11639 PF02653 Branched-chain amino acid transport system / permease component AGROH133_11648 PF05336 L-rhamnose mutarotase AGROH133_11650 PF00561 alpha/beta hydrolase fold AGROH133_11653 PF00563 EAL domain AGROH133_11653 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_11653 PF08447 PAS fold AGROH133_11653 PF08448 PAS fold AGROH133_11658 PF00171 Aldehyde dehydrogenase family AGROH133_11659 PF08713 DNA alkylation repair enzyme AGROH133_11660 PF00005 ABC transporter AGROH133_11661 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11669 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11679 PF00378 Enoyl-CoA hydratase/isomerase AGROH133_11683 PF08241 Methyltransferase domain AGROH133_11685 PF00795 Carbon-nitrogen hydrolase AGROH133_11686 PF00462 Glutaredoxin AGROH133_11688 PF08241 Methyltransferase domain AGROH133_11693 PF00293 NUDIX domain AGROH133_11694 PF00583 Acetyltransferase (GNAT) family AGROH133_11694 PF13508 Acetyltransferase (GNAT) domain AGROH133_11695 PF01960 ArgJ family AGROH133_11698 PF07517 SecA DEAD-like domain AGROH133_11698 PF07516 SecA Wing and Scaffold domain AGROH133_11698 PF01043 SecA preprotein cross-linking domain AGROH133_11698 PF02810 SEC-C motif AGROH133_11710 PF01757 Acyltransferase family AGROH133_11753 PF01943 Polysaccharide biosynthesis protein AGROH133_11771 PF01757 Acyltransferase family AGROH133_11783 PF13614 AAA domain AGROH133_11803 PF13439 Glycosyltransferase Family 4 AGROH133_11803 PF00534 Glycosyl transferases group 1 AGROH133_11804 PF00534 Glycosyl transferases group 1 AGROH133_11804 PF13439 Glycosyltransferase Family 4 AGROH133_11819 PF01272 Transcription elongation factor, GreA/GreB, C-term AGROH133_11819 PF03449 Transcription elongation factor, N-terminal AGROH133_11820 PF00722 Glycosyl hydrolases family 16 AGROH133_11820 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AGROH133_11822 PF03009 Glycerophosphoryl diester phosphodiesterase family AGROH133_11823 PF00005 ABC transporter AGROH133_11823 PF17912 MalK OB fold domain AGROH133_11824 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11833 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_11843 PF01047 MarR family AGROH133_11843 PF00480 ROK family AGROH133_11850 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AGROH133_11853 PF01381 Helix-turn-helix AGROH133_11856 PF00005 ABC transporter AGROH133_11857 PF02653 Branched-chain amino acid transport system / permease component AGROH133_11869 PF13407 Periplasmic binding protein domain AGROH133_11872 PF01266 FAD dependent oxidoreductase AGROH133_11872 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AGROH133_11874 PF02310 B12 binding domain AGROH133_11874 PF01642 Methylmalonyl-CoA mutase AGROH133_11875 PF02785 Biotin carboxylase C-terminal domain AGROH133_11875 PF00289 Biotin carboxylase, N-terminal domain AGROH133_11875 PF00364 Biotin-requiring enzyme AGROH133_11875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AGROH133_11875 PF18140 Propionyl-coenzyme A carboxylase BT domain AGROH133_11877 PF02798 Glutathione S-transferase, N-terminal domain AGROH133_11878 PF01039 Carboxyl transferase domain AGROH133_11879 PF06114 IrrE N-terminal-like domain AGROH133_11879 PF09856 Predicted transcriptional regulator (DUF2083) AGROH133_11879 PF01381 Helix-turn-helix AGROH133_11881 PF12833 Helix-turn-helix domain AGROH133_11881 PF06029 AlkA N-terminal domain AGROH133_11881 PF00730 HhH-GPD superfamily base excision DNA repair protein AGROH133_11881 PF02805 Metal binding domain of Ada AGROH133_11882 PF00749 tRNA synthetases class I (E and Q), catalytic domain AGROH133_11890 PF00106 short chain dehydrogenase AGROH133_11894 PF01923 Cobalamin adenosyltransferase AGROH133_11904 PF01012 Electron transfer flavoprotein domain AGROH133_11905 PF01012 Electron transfer flavoprotein domain AGROH133_11905 PF00766 Electron transfer flavoprotein FAD-binding domain AGROH133_11906 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AGROH133_11906 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AGROH133_11907 PF08534 Redoxin AGROH133_11910 PF14698 Argininosuccinate lyase C-terminal AGROH133_11910 PF00206 Lyase AGROH133_11912 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AGROH133_11912 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AGROH133_11917 PF00072 Response regulator receiver domain AGROH133_11918 PF00156 Phosphoribosyl transferase domain AGROH133_11921 PF00005 ABC transporter AGROH133_11932 PF04752 ChaC-like protein AGROH133_11936 PF02153 Prephenate dehydrogenase AGROH133_11937 PF00155 Aminotransferase class I and II AGROH133_11938 PF01209 ubiE/COQ5 methyltransferase family AGROH133_11939 PF16123 Hydroxyacylglutathione hydrolase C-terminus AGROH133_11939 PF00753 Metallo-beta-lactamase superfamily AGROH133_11943 PF00830 Ribosomal L28 family AGROH133_11944 PF02592 Putative vitamin uptake transporter AGROH133_11954 PF06213 Cobalamin biosynthesis protein CobT AGROH133_11954 PF11775 Cobalamin biosynthesis protein CobT VWA domain AGROH133_11955 PF12556 Cobaltochelatase CobS subunit N terminal AGROH133_11955 PF08406 CbbQ/NirQ/NorQ C-terminal AGROH133_11955 PF07728 AAA domain (dynein-related subfamily) AGROH133_11956 PF00226 DnaJ domain AGROH133_11957 PF01722 BolA-like protein AGROH133_11958 PF01761 3-dehydroquinate synthase AGROH133_11959 PF01202 Shikimate kinase AGROH133_11962 PF02899 Phage integrase, N-terminal SAM-like domain AGROH133_11962 PF00589 Phage integrase family AGROH133_11964 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AGROH133_11965 PF03734 L,D-transpeptidase catalytic domain AGROH133_11966 PF01206 Sulfurtransferase TusA AGROH133_11967 PF02492 CobW/HypB/UreG, nucleotide-binding domain AGROH133_11967 PF07683 Cobalamin synthesis protein cobW C-terminal domain AGROH133_11968 PF07943 Penicillin-binding protein 5, C-terminal domain AGROH133_11968 PF00768 D-alanyl-D-alanine carboxypeptidase AGROH133_11970 PF01546 Peptidase family M20/M25/M40 AGROH133_11970 PF07687 Peptidase dimerisation domain AGROH133_11972 PF06832 Penicillin-Binding Protein C-terminus Family AGROH133_11972 PF00912 Transglycosylase AGROH133_11972 PF00905 Penicillin binding protein transpeptidase domain AGROH133_11975 PF00207 Alpha-2-macroglobulin family AGROH133_11975 PF07703 Alpha-2-macroglobulin bait region domain AGROH133_11975 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AGROH133_11975 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AGROH133_11975 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AGROH133_11975 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AGROH133_11975 PF17962 Bacterial macroglobulin domain 6 AGROH133_11975 PF01835 MG2 domain AGROH133_11975 PF07678 A-macroglobulin TED domain AGROH133_11978 PF03966 Trm112p-like protein AGROH133_11980 PF00085 Thioredoxin AGROH133_12001 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AGROH133_12001 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AGROH133_12001 PF01842 ACT domain AGROH133_12003 PF13505 Outer membrane protein beta-barrel domain AGROH133_12005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AGROH133_12005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AGROH133_12005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AGROH133_12005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AGROH133_12006 PF00004 ATPase family associated with various cellular activities (AAA) AGROH133_12006 PF17862 AAA+ lid domain AGROH133_12006 PF06480 FtsH Extracellular AGROH133_12006 PF01434 Peptidase family M41 AGROH133_12010 PF01171 PP-loop family AGROH133_12013 PF00691 OmpA family AGROH133_12014 PF04052 TolB amino-terminal domain AGROH133_12014 PF07676 WD40-like Beta Propeller Repeat AGROH133_12019 PF02472 Biopolymer transport protein ExbD/TolR AGROH133_12021 PF01618 MotA/TolQ/ExbB proton channel family AGROH133_12025 PF03061 Thioesterase superfamily AGROH133_12026 PF00293 NUDIX domain AGROH133_12027 PF00293 NUDIX domain AGROH133_12030 PF05496 Holliday junction DNA helicase RuvB P-loop domain AGROH133_12030 PF17864 RuvB AAA lid domain AGROH133_12030 PF05491 RuvB C-terminal winged helix domain AGROH133_12031 PF01330 RuvA N terminal domain AGROH133_12031 PF07499 RuvA, C-terminal domain AGROH133_12032 PF02075 Crossover junction endodeoxyribonuclease RuvC AGROH133_12033 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_12033 PF00672 HAMP domain AGROH133_12038 PF00296 Luciferase-like monooxygenase AGROH133_12039 PF01709 Transcriptional regulator AGROH133_12043 PF13277 YmdB-like protein AGROH133_12045 PF01595 Cyclin M transmembrane N-terminal domain AGROH133_12045 PF00571 CBS domain AGROH133_12045 PF03471 Transporter associated domain AGROH133_12051 PF02780 Transketolase, C-terminal domain AGROH133_12051 PF00456 Transketolase, thiamine diphosphate binding domain AGROH133_12051 PF02779 Transketolase, pyrimidine binding domain AGROH133_12052 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AGROH133_12052 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AGROH133_12055 PF03471 Transporter associated domain AGROH133_12055 PF00999 Sodium/hydrogen exchanger family AGROH133_12069 PF00162 Phosphoglycerate kinase AGROH133_12070 PF00274 Fructose-bisphosphate aldolase class-I AGROH133_12089 PF01197 Ribosomal protein L31 AGROH133_12090 PF00664 ABC transporter transmembrane region AGROH133_12090 PF00005 ABC transporter AGROH133_12096 PF00890 FAD binding domain AGROH133_12097 PF01389 OmpA-like transmembrane domain AGROH133_12097 PF00691 OmpA family AGROH133_12103 PF00459 Inositol monophosphatase family AGROH133_12120 PF00731 AIR carboxylase AGROH133_12121 PF02222 ATP-grasp domain AGROH133_12121 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AGROH133_12123 PF00444 Ribosomal protein L36 AGROH133_12125 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) AGROH133_12130 PF00224 Pyruvate kinase, barrel domain AGROH133_12130 PF02887 Pyruvate kinase, alpha/beta domain AGROH133_12131 PF05951 Bacterial protein of unknown function (DUF882) AGROH133_12133 PF00158 Sigma-54 interaction domain AGROH133_12133 PF02954 Bacterial regulatory protein, Fis family AGROH133_12133 PF00072 Response regulator receiver domain AGROH133_12135 PF08439 Oligopeptidase F AGROH133_12135 PF01432 Peptidase family M3 AGROH133_12136 PF01063 Amino-transferase class IV AGROH133_12137 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_12138 PF16653 Saccharopine dehydrogenase C-terminal domain AGROH133_12138 PF03435 Saccharopine dehydrogenase NADP binding domain AGROH133_12141 PF02872 5'-nucleotidase, C-terminal domain AGROH133_12141 PF00149 Calcineurin-like phosphoesterase AGROH133_12143 PF00762 Ferrochelatase AGROH133_12144 PF16200 C-terminal region of band_7 AGROH133_12144 PF01145 SPFH domain / Band 7 family AGROH133_12149 PF00571 CBS domain AGROH133_12149 PF01380 SIS domain AGROH133_12156 PF00483 Nucleotidyl transferase AGROH133_12157 PF13406 Transglycosylase SLT domain AGROH133_12163 PF00072 Response regulator receiver domain AGROH133_12163 PF00486 Transcriptional regulatory protein, C terminal AGROH133_12164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_12164 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_12164 PF00672 HAMP domain AGROH133_12169 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AGROH133_12169 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_12173 PF01493 GXGXG motif AGROH133_12173 PF01645 Conserved region in glutamate synthase AGROH133_12173 PF04898 Glutamate synthase central domain AGROH133_12173 PF00310 Glutamine amidotransferases class-II AGROH133_12174 PF01212 Beta-eliminating lyase AGROH133_12175 PF00072 Response regulator receiver domain AGROH133_12175 PF00486 Transcriptional regulatory protein, C terminal AGROH133_12176 PF02702 Osmosensitive K+ channel His kinase sensor domain AGROH133_12176 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_12176 PF13492 GAF domain AGROH133_12176 PF13493 Domain of unknown function (DUF4118) AGROH133_12176 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_12180 PF02669 K+-transporting ATPase, c chain AGROH133_12191 PF03814 Potassium-transporting ATPase A subunit AGROH133_12209 PF00710 Asparaginase, N-terminal AGROH133_12209 PF17763 Glutaminase/Asparaginase C-terminal domain AGROH133_12210 PF00324 Amino acid permease AGROH133_12223 PF10415 Fumarase C C-terminus AGROH133_12223 PF00206 Lyase AGROH133_12224 PF00392 Bacterial regulatory proteins, gntR family AGROH133_12224 PF07729 FCD domain AGROH133_12227 PF00873 AcrB/AcrD/AcrF family AGROH133_12241 PF13533 Biotin-lipoyl like AGROH133_12243 PF00440 Bacterial regulatory proteins, tetR family AGROH133_12243 PF13977 BetI-type transcriptional repressor, C-terminal AGROH133_12246 PF00487 Fatty acid desaturase AGROH133_12255 PF03466 LysR substrate binding domain AGROH133_12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_12265 PF00171 Aldehyde dehydrogenase family AGROH133_12266 PF08402 TOBE domain AGROH133_12266 PF00005 ABC transporter AGROH133_12267 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12275 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12286 PF00171 Aldehyde dehydrogenase family AGROH133_12287 PF00296 Luciferase-like monooxygenase AGROH133_12288 PF01613 Flavin reductase like domain AGROH133_12289 PF12697 Alpha/beta hydrolase family AGROH133_12291 PF00465 Iron-containing alcohol dehydrogenase AGROH133_12292 PF00005 ABC transporter AGROH133_12293 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12300 PF00392 Bacterial regulatory proteins, gntR family AGROH133_12300 PF07729 FCD domain AGROH133_12301 PF00551 Formyl transferase AGROH133_12302 PF00120 Glutamine synthetase, catalytic domain AGROH133_12303 PF01645 Conserved region in glutamate synthase AGROH133_12304 PF01493 GXGXG motif AGROH133_12310 PF00701 Dihydrodipicolinate synthetase family AGROH133_12311 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_12311 PF00005 ABC transporter AGROH133_12313 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_12313 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12319 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12328 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_12332 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AGROH133_12333 PF00465 Iron-containing alcohol dehydrogenase AGROH133_12334 PF07729 FCD domain AGROH133_12334 PF00392 Bacterial regulatory proteins, gntR family AGROH133_12339 PF03061 Thioesterase superfamily AGROH133_12342 PF00005 ABC transporter AGROH133_12350 PF04168 A predicted alpha-helical domain with a conserved ER motif. AGROH133_12350 PF14403 Circularly permuted ATP-grasp type 2 AGROH133_12351 PF08379 Bacterial transglutaminase-like N-terminal region AGROH133_12351 PF01841 Transglutaminase-like superfamily AGROH133_12354 PF00005 ABC transporter AGROH133_12354 PF12848 ABC transporter AGROH133_12355 PF01070 FMN-dependent dehydrogenase AGROH133_12356 PF01047 MarR family AGROH133_12358 PF00672 HAMP domain AGROH133_12358 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_12362 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AGROH133_12362 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AGROH133_12363 PF01791 DeoC/LacD family aldolase AGROH133_12364 PF01266 FAD dependent oxidoreductase AGROH133_12364 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AGROH133_12365 PF00248 Aldo/keto reductase family AGROH133_12369 PF02653 Branched-chain amino acid transport system / permease component AGROH133_12379 PF00005 ABC transporter AGROH133_12380 PF13407 Periplasmic binding protein domain AGROH133_12384 PF00072 Response regulator receiver domain AGROH133_12386 PF00459 Inositol monophosphatase family AGROH133_12388 PF00011 Hsp20/alpha crystallin family AGROH133_12389 PF13593 SBF-like CPA transporter family (DUF4137) AGROH133_12399 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_12399 PF03466 LysR substrate binding domain AGROH133_12401 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AGROH133_12401 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AGROH133_12408 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12415 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12422 PF17912 MalK OB fold domain AGROH133_12422 PF00005 ABC transporter AGROH133_12423 PF08402 TOBE domain AGROH133_12423 PF00005 ABC transporter AGROH133_12424 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AGROH133_12424 PF01266 FAD dependent oxidoreductase AGROH133_12425 PF08220 DeoR-like helix-turn-helix domain AGROH133_12425 PF00455 DeoR C terminal sensor domain AGROH133_12427 PF10414 Sirohaem synthase dimerisation region AGROH133_12427 PF14824 Sirohaem biosynthesis protein central AGROH133_12427 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AGROH133_12428 PF00384 Molybdopterin oxidoreductase AGROH133_12428 PF04324 BFD-like [2Fe-2S] binding domain AGROH133_12428 PF01568 Molydopterin dinucleotide binding domain AGROH133_12428 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AGROH133_12430 PF18267 Rubredoxin NAD+ reductase C-terminal domain AGROH133_12430 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_12430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AGROH133_12430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AGROH133_12430 PF04324 BFD-like [2Fe-2S] binding domain AGROH133_12431 PF00005 ABC transporter AGROH133_12432 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12441 PF03861 ANTAR domain AGROH133_12441 PF08376 Nitrate and nitrite sensing AGROH133_12442 PF00392 Bacterial regulatory proteins, gntR family AGROH133_12442 PF07729 FCD domain AGROH133_12444 PF01566 Natural resistance-associated macrophage protein AGROH133_12457 PF03746 LamB/YcsF family AGROH133_12458 PF07286 Protein of unknown function (DUF1445) AGROH133_12459 PF02682 Carboxyltransferase domain, subdomain C and D AGROH133_12460 PF00289 Biotin carboxylase, N-terminal domain AGROH133_12460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AGROH133_12460 PF00364 Biotin-requiring enzyme AGROH133_12460 PF02785 Biotin carboxylase C-terminal domain AGROH133_12461 PF00128 Alpha amylase, catalytic domain AGROH133_12461 PF02806 Alpha amylase, C-terminal all-beta domain AGROH133_12462 PF09278 MerR, DNA binding AGROH133_12462 PF00376 MerR family regulatory protein AGROH133_12464 PF00593 TonB dependent receptor AGROH133_12464 PF07715 TonB-dependent Receptor Plug Domain AGROH133_12466 PF02885 Glycosyl transferase family, helical bundle domain AGROH133_12466 PF00591 Glycosyl transferase family, a/b domain AGROH133_12468 PF06772 Bacterial low temperature requirement A protein (LtrA) AGROH133_12481 PF03428 Replication protein C N-terminal domain AGROH133_12481 PF11800 Replication protein C C-terminal region AGROH133_12482 PF02195 ParB-like nuclease domain AGROH133_12482 PF07506 RepB plasmid partitioning protein AGROH133_12483 PF13614 AAA domain AGROH133_12486 PF01042 Endoribonuclease L-PSP AGROH133_12487 PF01168 Alanine racemase, N-terminal domain AGROH133_12487 PF14031 Putative serine dehydratase domain AGROH133_12488 PF07171 MlrC C-terminus AGROH133_12488 PF07364 Metallopeptidase family M81 AGROH133_12489 PF05962 HutD AGROH133_12490 PF12697 Alpha/beta hydrolase family AGROH133_12493 PF01175 Urocanase Rossmann-like domain AGROH133_12493 PF17391 Urocanase N-terminal domain AGROH133_12493 PF17392 Urocanase C-terminal domain AGROH133_12495 PF00221 Aromatic amino acid lyase AGROH133_12496 PF01979 Amidohydrolase family AGROH133_12497 PF01979 Amidohydrolase family AGROH133_12498 PF00392 Bacterial regulatory proteins, gntR family AGROH133_12498 PF07702 UTRA domain AGROH133_12506 PF00364 Biotin-requiring enzyme AGROH133_12507 PF02785 Biotin carboxylase C-terminal domain AGROH133_12507 PF00289 Biotin carboxylase, N-terminal domain AGROH133_12507 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AGROH133_12510 PF02626 Carboxyltransferase domain, subdomain A and B AGROH133_12511 PF03746 LamB/YcsF family AGROH133_12512 PF00155 Aminotransferase class I and II AGROH133_12513 PF03466 LysR substrate binding domain AGROH133_12513 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_12515 PF00106 short chain dehydrogenase AGROH133_12516 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12521 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12527 PF00005 ABC transporter AGROH133_12528 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_12530 PF03737 Aldolase/RraA AGROH133_12531 PF00491 Arginase family AGROH133_12532 PF00005 ABC transporter AGROH133_12533 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12538 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12542 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_12544 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_12544 PF03466 LysR substrate binding domain AGROH133_12559 PF03358 NADPH-dependent FMN reductase AGROH133_12560 PF03960 ArsC family AGROH133_12561 PF01758 Sodium Bile acid symporter family AGROH133_12574 PF03737 Aldolase/RraA AGROH133_12575 PF01370 NAD dependent epimerase/dehydratase family AGROH133_12576 PF00920 Dehydratase family AGROH133_12577 PF00005 ABC transporter AGROH133_12577 PF03459 TOBE domain AGROH133_12577 PF17912 MalK OB fold domain AGROH133_12578 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12585 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_12595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_12596 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_12596 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_12597 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_12597 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_12598 PF07729 FCD domain AGROH133_12598 PF00392 Bacterial regulatory proteins, gntR family AGROH133_12600 PF00293 NUDIX domain AGROH133_12601 PF02567 Phenazine biosynthesis-like protein AGROH133_12603 PF01494 FAD binding domain AGROH133_12604 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_12604 PF03466 LysR substrate binding domain AGROH133_12606 PF07690 Major Facilitator Superfamily AGROH133_12622 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AGROH133_12623 PF00296 Luciferase-like monooxygenase AGROH133_12625 PF00005 ABC transporter AGROH133_12625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_12626 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12627 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12634 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_12636 PF01568 Molydopterin dinucleotide binding domain AGROH133_12636 PF00384 Molybdopterin oxidoreductase AGROH133_12637 PF02913 FAD linked oxidases, C-terminal domain AGROH133_12637 PF01565 FAD binding domain AGROH133_12638 PF01323 DSBA-like thioredoxin domain AGROH133_12643 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_12643 PF00672 HAMP domain AGROH133_12643 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_12647 PF00072 Response regulator receiver domain AGROH133_12647 PF00486 Transcriptional regulatory protein, C terminal AGROH133_12648 PF01569 PAP2 superfamily AGROH133_12672 PF13673 Acetyltransferase (GNAT) domain AGROH133_12673 PF04055 Radical SAM superfamily AGROH133_12673 PF06968 Biotin and Thiamin Synthesis associated domain AGROH133_12674 PF00155 Aminotransferase class I and II AGROH133_12676 PF00202 Aminotransferase class-III AGROH133_12677 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AGROH133_12677 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AGROH133_12681 PF00491 Arginase family AGROH133_12682 PF02423 Ornithine cyclodeaminase/mu-crystallin family AGROH133_12683 PF00892 EamA-like transporter family AGROH133_12695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_12695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_12697 PF00211 Adenylate and Guanylate cyclase catalytic domain AGROH133_12699 PF11972 HTH DNA binding domain AGROH133_12699 PF07756 Protein of unknown function (DUF1612) AGROH133_12700 PF00083 Sugar (and other) transporter AGROH133_12712 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_12712 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_12716 PF00072 Response regulator receiver domain AGROH133_12716 PF00486 Transcriptional regulatory protein, C terminal AGROH133_12717 PF08019 Phosphoethanolamine transferase EptA/EptB AGROH133_12717 PF00884 Sulfatase AGROH133_12724 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_12724 PF03466 LysR substrate binding domain AGROH133_12726 PF00593 TonB dependent receptor AGROH133_12726 PF07715 TonB-dependent Receptor Plug Domain AGROH133_12730 PF01032 FecCD transport family AGROH133_12751 PF00005 ABC transporter AGROH133_12757 PF02631 RecX family AGROH133_12758 PF08450 SMP-30/Gluconolactonase/LRE-like region AGROH133_12770 PF02653 Branched-chain amino acid transport system / permease component AGROH133_12781 PF00005 ABC transporter AGROH133_12782 PF13407 Periplasmic binding protein domain AGROH133_12784 PF07730 Histidine kinase AGROH133_12784 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_12785 PF00196 Bacterial regulatory proteins, luxR family AGROH133_12785 PF00072 Response regulator receiver domain AGROH133_12788 PF07995 Glucose / Sorbosone dehydrogenase AGROH133_12792 PF04445 Putative SAM-dependent methyltransferase AGROH133_12793 PF00849 RNA pseudouridylate synthase AGROH133_12794 PF01205 Uncharacterized protein family UPF0029 AGROH133_12795 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_12795 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AGROH133_12797 PF00005 ABC transporter AGROH133_12797 PF00571 CBS domain AGROH133_12798 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12807 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_12807 PF13426 PAS domain AGROH133_12807 PF00072 Response regulator receiver domain AGROH133_12808 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AGROH133_12809 PF02706 Chain length determinant protein AGROH133_12809 PF13807 G-rich domain on putative tyrosine kinase AGROH133_12809 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AGROH133_12811 PF00483 Nucleotidyl transferase AGROH133_12812 PF00535 Glycosyl transferase family 2 AGROH133_12813 PF00535 Glycosyl transferase family 2 AGROH133_12814 PF00535 Glycosyl transferase family 2 AGROH133_12819 PF00722 Glycosyl hydrolases family 16 AGROH133_12821 PF01757 Acyltransferase family AGROH133_12831 PF01943 Polysaccharide biosynthesis protein AGROH133_12846 PF00535 Glycosyl transferase family 2 AGROH133_12847 PF04230 Polysaccharide pyruvyl transferase AGROH133_12849 PF00535 Glycosyl transferase family 2 AGROH133_12850 PF11089 Exopolysaccharide production repressor AGROH133_12855 PF01165 Ribosomal protein S21 AGROH133_12856 PF01266 FAD dependent oxidoreductase AGROH133_12859 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_12859 PF17806 Sarcosine oxidase A3 domain AGROH133_12859 PF01571 Aminomethyltransferase folate-binding domain AGROH133_12859 PF08669 Glycine cleavage T-protein C-terminal barrel domain AGROH133_12863 PF01575 MaoC like domain AGROH133_12864 PF18390 Glycogen debranching enzyme C-terminal domain AGROH133_12864 PF00128 Alpha amylase, catalytic domain AGROH133_12864 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AGROH133_12865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AGROH133_12865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AGROH133_12865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AGROH133_12865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AGROH133_12866 PF08323 Starch synthase catalytic domain AGROH133_12866 PF00534 Glycosyl transferases group 1 AGROH133_12867 PF00483 Nucleotidyl transferase AGROH133_12868 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AGROH133_12868 PF02806 Alpha amylase, C-terminal all-beta domain AGROH133_12868 PF00128 Alpha amylase, catalytic domain AGROH133_12869 PF00343 Carbohydrate phosphorylase AGROH133_12872 PF01177 Asp/Glu/Hydantoin racemase AGROH133_12873 PF01037 Lrp/AsnC ligand binding domain AGROH133_12876 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AGROH133_12876 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AGROH133_12878 PF00107 Zinc-binding dehydrogenase AGROH133_12878 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_12880 PF00005 ABC transporter AGROH133_12880 PF00664 ABC transporter transmembrane region AGROH133_12886 PF00005 ABC transporter AGROH133_12886 PF00664 ABC transporter transmembrane region AGROH133_12894 PF01654 Cytochrome bd terminal oxidase subunit I AGROH133_12904 PF02322 Cytochrome bd terminal oxidase subunit II AGROH133_12913 PF08173 Membrane bound YbgT-like protein AGROH133_12921 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AGROH133_12921 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AGROH133_12922 PF00890 FAD binding domain AGROH133_12922 PF02910 Fumarate reductase flavoprotein C-term AGROH133_12924 PF02445 Quinolinate synthetase A protein AGROH133_12931 PF02224 Cytidylate kinase AGROH133_12932 PF00575 S1 RNA binding domain AGROH133_12938 PF00106 short chain dehydrogenase AGROH133_12940 PF00557 Metallopeptidase family M24 AGROH133_12940 PF01321 Creatinase/Prolidase N-terminal domain AGROH133_12941 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_12943 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12946 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12952 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_12952 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_12957 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_12957 PF00005 ABC transporter AGROH133_12958 PF00005 ABC transporter AGROH133_12958 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_12959 PF07729 FCD domain AGROH133_12959 PF00392 Bacterial regulatory proteins, gntR family AGROH133_12960 PF13378 Enolase C-terminal domain-like AGROH133_12960 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AGROH133_12961 PF00296 Luciferase-like monooxygenase AGROH133_12966 PF12399 Branched-chain amino acid ATP-binding cassette transporter AGROH133_12966 PF00005 ABC transporter AGROH133_12967 PF00005 ABC transporter AGROH133_12968 PF02653 Branched-chain amino acid transport system / permease component AGROH133_12977 PF02653 Branched-chain amino acid transport system / permease component AGROH133_12977 PF11862 Domain of unknown function (DUF3382) AGROH133_12986 PF05199 GMC oxidoreductase AGROH133_12986 PF00732 GMC oxidoreductase AGROH133_12987 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AGROH133_12987 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AGROH133_12988 PF00501 AMP-binding enzyme AGROH133_12988 PF13193 AMP-binding enzyme C-terminal domain AGROH133_12995 PF01011 PQQ enzyme repeat AGROH133_13001 PF05974 Domain of unknown function (DUF892) AGROH133_13003 PF01965 DJ-1/PfpI family AGROH133_13008 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AGROH133_13008 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AGROH133_13009 PF16363 GDP-mannose 4,6 dehydratase AGROH133_13010 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AGROH133_13010 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AGROH133_13010 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AGROH133_13021 PF13409 Glutathione S-transferase, N-terminal domain AGROH133_13022 PF03466 LysR substrate binding domain AGROH133_13022 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_13024 PF00171 Aldehyde dehydrogenase family AGROH133_13026 PF09084 NMT1/THI5 like AGROH133_13028 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13035 PF00005 ABC transporter AGROH133_13036 PF14850 DNA-binding domain of Proline dehydrogenase AGROH133_13036 PF00171 Aldehyde dehydrogenase family AGROH133_13036 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AGROH133_13036 PF01619 Proline dehydrogenase AGROH133_13037 PF01037 Lrp/AsnC ligand binding domain AGROH133_13038 PF08281 Sigma-70, region 4 AGROH133_13038 PF04542 Sigma-70 region 2 AGROH133_13040 PF00072 Response regulator receiver domain AGROH133_13042 PF13426 PAS domain AGROH133_13042 PF08447 PAS fold AGROH133_13042 PF07536 HWE histidine kinase AGROH133_13043 PF07536 HWE histidine kinase AGROH133_13043 PF13426 PAS domain AGROH133_13050 PF16363 GDP-mannose 4,6 dehydratase AGROH133_13055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AGROH133_13056 PF03435 Saccharopine dehydrogenase NADP binding domain AGROH133_13056 PF16653 Saccharopine dehydrogenase C-terminal domain AGROH133_13057 PF00270 DEAD/DEAH box helicase AGROH133_13057 PF00271 Helicase conserved C-terminal domain AGROH133_13058 PF13840 ACT domain AGROH133_13058 PF01842 ACT domain AGROH133_13058 PF00696 Amino acid kinase family AGROH133_13059 PF00391 PEP-utilising enzyme, mobile domain AGROH133_13059 PF02896 PEP-utilising enzyme, TIM barrel domain AGROH133_13059 PF05524 PEP-utilising enzyme, N-terminal AGROH133_13059 PF01590 GAF domain AGROH133_13060 PF03462 PCRF domain AGROH133_13060 PF00472 RF-1 domain AGROH133_13061 PF05175 Methyltransferase small domain AGROH133_13061 PF17827 PrmC N-terminal domain AGROH133_13063 PF17871 AAA lid domain AGROH133_13063 PF00004 ATPase family associated with various cellular activities (AAA) AGROH133_13063 PF02861 Clp amino terminal domain, pathogenicity island component AGROH133_13063 PF07724 AAA domain (Cdc48 subfamily) AGROH133_13063 PF10431 C-terminal, D2-small domain, of ClpB protein AGROH133_13065 PF01551 Peptidase family M23 AGROH133_13065 PF01464 Transglycosylase SLT domain AGROH133_13065 PF10145 Phage-related minor tail protein AGROH133_13075 PF00091 Tubulin/FtsZ family, GTPase domain AGROH133_13075 PF12327 FtsZ family, C-terminal domain AGROH133_13076 PF02801 Beta-ketoacyl synthase, C-terminal domain AGROH133_13076 PF00109 Beta-ketoacyl synthase, N-terminal domain AGROH133_13082 PF00873 AcrB/AcrD/AcrF family AGROH133_13096 PF00440 Bacterial regulatory proteins, tetR family AGROH133_13097 PF00106 short chain dehydrogenase AGROH133_13098 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AGROH133_13099 PF00106 short chain dehydrogenase AGROH133_13100 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_13100 PF00107 Zinc-binding dehydrogenase AGROH133_13102 PF00384 Molybdopterin oxidoreductase AGROH133_13103 PF07690 Major Facilitator Superfamily AGROH133_13116 PF01494 FAD binding domain AGROH133_13117 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_13119 PF00196 Bacterial regulatory proteins, luxR family AGROH133_13119 PF00072 Response regulator receiver domain AGROH133_13120 PF00196 Bacterial regulatory proteins, luxR family AGROH133_13120 PF00072 Response regulator receiver domain AGROH133_13121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_13121 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_13121 PF08448 PAS fold AGROH133_13121 PF13426 PAS domain AGROH133_13121 PF00072 Response regulator receiver domain AGROH133_13126 PF00190 Cupin AGROH133_13127 PF00210 Ferritin-like domain AGROH133_13128 PF00561 alpha/beta hydrolase fold AGROH133_13131 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_13131 PF03466 LysR substrate binding domain AGROH133_13135 PF01047 MarR family AGROH133_13138 PF00561 alpha/beta hydrolase fold AGROH133_13141 PF04752 ChaC-like protein AGROH133_13142 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_13142 PF03466 LysR substrate binding domain AGROH133_13144 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AGROH133_13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_13145 PF03466 LysR substrate binding domain AGROH133_13152 PF07969 Amidohydrolase family AGROH133_13173 PF00111 2Fe-2S iron-sulfur cluster binding domain AGROH133_13173 PF01799 [2Fe-2S] binding domain AGROH133_13173 PF10518 TAT (twin-arginine translocation) pathway signal sequence AGROH133_13175 PF00941 FAD binding domain in molybdopterin dehydrogenase AGROH133_13175 PF03450 CO dehydrogenase flavoprotein C-terminal domain AGROH133_13176 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AGROH133_13176 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AGROH133_13177 PF02625 XdhC and CoxI family AGROH133_13177 PF13478 XdhC Rossmann domain AGROH133_13178 PF00132 Bacterial transferase hexapeptide (six repeats) AGROH133_13178 PF12804 MobA-like NTP transferase domain AGROH133_13180 PF01965 DJ-1/PfpI family AGROH133_13181 PF00563 EAL domain AGROH133_13181 PF03707 Bacterial signalling protein N terminal repeat AGROH133_13181 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_13182 PF00313 'Cold-shock' DNA-binding domain AGROH133_13183 PF00571 CBS domain AGROH133_13183 PF00005 ABC transporter AGROH133_13184 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13199 PF07702 UTRA domain AGROH133_13199 PF00392 Bacterial regulatory proteins, gntR family AGROH133_13201 PF00221 Aromatic amino acid lyase AGROH133_13210 PF00005 ABC transporter AGROH133_13210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_13211 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_13211 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13217 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_13227 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_13227 PF02203 Tar ligand binding domain homologue AGROH133_13227 PF00672 HAMP domain AGROH133_13232 PF00171 Aldehyde dehydrogenase family AGROH133_13233 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AGROH133_13233 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AGROH133_13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_13235 PF03466 LysR substrate binding domain AGROH133_13237 PF07687 Peptidase dimerisation domain AGROH133_13237 PF01546 Peptidase family M20/M25/M40 AGROH133_13252 PF00392 Bacterial regulatory proteins, gntR family AGROH133_13252 PF07729 FCD domain AGROH133_13255 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13262 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13268 PF07470 Glycosyl Hydrolase Family 88 AGROH133_13269 PF00005 ABC transporter AGROH133_13269 PF17912 MalK OB fold domain AGROH133_13269 PF03459 TOBE domain AGROH133_13276 PF01547 Bacterial extracellular solute-binding protein AGROH133_13280 PF14602 Hexapeptide repeat of succinyl-transferase AGROH133_13280 PF00132 Bacterial transferase hexapeptide (six repeats) AGROH133_13280 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AGROH133_13281 PF13188 PAS domain AGROH133_13281 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_13281 PF00563 EAL domain AGROH133_13281 PF03707 Bacterial signalling protein N terminal repeat AGROH133_13294 PF00356 Bacterial regulatory proteins, lacI family AGROH133_13299 PF00005 ABC transporter AGROH133_13300 PF02653 Branched-chain amino acid transport system / permease component AGROH133_13311 PF02126 Phosphotriesterase family AGROH133_13313 PF00294 pfkB family carbohydrate kinase AGROH133_13315 PF01546 Peptidase family M20/M25/M40 AGROH133_13315 PF07687 Peptidase dimerisation domain AGROH133_13316 PF02469 Fasciclin domain AGROH133_13318 PF00330 Aconitase family (aconitate hydratase) AGROH133_13318 PF06434 Aconitate hydratase 2 N-terminus AGROH133_13318 PF11791 Aconitate B N-terminal domain AGROH133_13320 PF00733 Asparagine synthase AGROH133_13320 PF13537 Glutamine amidotransferase domain AGROH133_13322 PF13193 AMP-binding enzyme C-terminal domain AGROH133_13322 PF00501 AMP-binding enzyme AGROH133_13323 PF02540 NAD synthase AGROH133_13328 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_13328 PF08669 Glycine cleavage T-protein C-terminal barrel domain AGROH133_13328 PF01571 Aminomethyltransferase folate-binding domain AGROH133_13328 PF17806 Sarcosine oxidase A3 domain AGROH133_13329 PF04267 Sarcosine oxidase, delta subunit family AGROH133_13330 PF01266 FAD dependent oxidoreductase AGROH133_13331 PF01965 DJ-1/PfpI family AGROH133_13331 PF12833 Helix-turn-helix domain AGROH133_13333 PF00005 ABC transporter AGROH133_13334 PF02653 Branched-chain amino acid transport system / permease component AGROH133_13345 PF02653 Branched-chain amino acid transport system / permease component AGROH133_13358 PF07729 FCD domain AGROH133_13358 PF00392 Bacterial regulatory proteins, gntR family AGROH133_13361 PF08125 Mannitol dehydrogenase C-terminal domain AGROH133_13361 PF01232 Mannitol dehydrogenase Rossmann domain AGROH133_13362 PF03786 D-mannonate dehydratase (UxuA) AGROH133_13363 PF00248 Aldo/keto reductase family AGROH133_13377 PF00440 Bacterial regulatory proteins, tetR family AGROH133_13378 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_13378 PF00107 Zinc-binding dehydrogenase AGROH133_13379 PF12833 Helix-turn-helix domain AGROH133_13381 PF13407 Periplasmic binding protein domain AGROH133_13383 PF00005 ABC transporter AGROH133_13384 PF02653 Branched-chain amino acid transport system / permease component AGROH133_13393 PF00106 short chain dehydrogenase AGROH133_13394 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AGROH133_13394 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AGROH133_13396 PF08946 Osmosensory transporter coiled coil AGROH133_13396 PF00083 Sugar (and other) transporter AGROH133_13410 PF00459 Inositol monophosphatase family AGROH133_13413 PF02690 Na+/Pi-cotransporter AGROH133_13422 PF00356 Bacterial regulatory proteins, lacI family AGROH133_13424 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13437 PF00005 ABC transporter AGROH133_13437 PF08402 TOBE domain AGROH133_13447 PF00459 Inositol monophosphatase family AGROH133_13449 PF03741 Integral membrane protein TerC family AGROH133_13449 PF03471 Transporter associated domain AGROH133_13460 PF03459 TOBE domain AGROH133_13460 PF17912 MalK OB fold domain AGROH133_13460 PF00005 ABC transporter AGROH133_13461 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13468 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13475 PF13416 Bacterial extracellular solute-binding protein AGROH133_13477 PF01261 Xylose isomerase-like TIM barrel AGROH133_13478 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_13478 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_13479 PF00356 Bacterial regulatory proteins, lacI family AGROH133_13484 PF01266 FAD dependent oxidoreductase AGROH133_13486 PF17806 Sarcosine oxidase A3 domain AGROH133_13486 PF08669 Glycine cleavage T-protein C-terminal barrel domain AGROH133_13486 PF01571 Aminomethyltransferase folate-binding domain AGROH133_13486 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_13488 PF00464 Serine hydroxymethyltransferase AGROH133_13489 PF00551 Formyl transferase AGROH133_13490 PF00924 Mechanosensitive ion channel AGROH133_13505 PF00916 Sulfate permease family AGROH133_13505 PF01740 STAS domain AGROH133_13520 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AGROH133_13520 PF01648 4'-phosphopantetheinyl transferase superfamily AGROH133_13522 PF00550 Phosphopantetheine attachment site AGROH133_13522 PF00857 Isochorismatase family AGROH133_13523 PF00501 AMP-binding enzyme AGROH133_13523 PF13193 AMP-binding enzyme C-terminal domain AGROH133_13524 PF00425 chorismate binding enzyme AGROH133_13525 PF00550 Phosphopantetheine attachment site AGROH133_13525 PF00501 AMP-binding enzyme AGROH133_13525 PF13193 AMP-binding enzyme C-terminal domain AGROH133_13525 PF00668 Condensation domain AGROH133_13526 PF00550 Phosphopantetheine attachment site AGROH133_13526 PF00668 Condensation domain AGROH133_13526 PF00501 AMP-binding enzyme AGROH133_13526 PF00975 Thioesterase domain AGROH133_13527 PF13193 AMP-binding enzyme C-terminal domain AGROH133_13527 PF00550 Phosphopantetheine attachment site AGROH133_13527 PF00668 Condensation domain AGROH133_13527 PF00975 Thioesterase domain AGROH133_13527 PF00501 AMP-binding enzyme AGROH133_13529 PF04954 Siderophore-interacting protein AGROH133_13529 PF08021 Siderophore-interacting FAD-binding domain AGROH133_13532 PF01032 FecCD transport family AGROH133_13541 PF01032 FecCD transport family AGROH133_13552 PF00005 ABC transporter AGROH133_13553 PF00296 Luciferase-like monooxygenase AGROH133_13556 PF07715 TonB-dependent Receptor Plug Domain AGROH133_13558 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AGROH133_13558 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AGROH133_13558 PF02770 Acyl-CoA dehydrogenase, middle domain AGROH133_13559 PF03466 LysR substrate binding domain AGROH133_13559 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_13562 PF00356 Bacterial regulatory proteins, lacI family AGROH133_13567 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13583 PF08402 TOBE domain AGROH133_13583 PF00005 ABC transporter AGROH133_13585 PF13382 Adenine deaminase C-terminal domain AGROH133_13585 PF01979 Amidohydrolase family AGROH133_13586 PF07690 Major Facilitator Superfamily AGROH133_13599 PF07687 Peptidase dimerisation domain AGROH133_13599 PF01546 Peptidase family M20/M25/M40 AGROH133_13601 PF01244 Membrane dipeptidase (Peptidase family M19) AGROH133_13602 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_13604 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13614 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_13614 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_13620 PF00005 ABC transporter AGROH133_13621 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_13621 PF00005 ABC transporter AGROH133_13622 PF03466 LysR substrate binding domain AGROH133_13622 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_13624 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_13626 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13634 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13634 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_13635 PF01425 Amidase AGROH133_13636 PF01965 DJ-1/PfpI family AGROH133_13638 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_13638 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13645 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13653 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_13655 PF07687 Peptidase dimerisation domain AGROH133_13655 PF01546 Peptidase family M20/M25/M40 AGROH133_13656 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_13656 PF00005 ABC transporter AGROH133_13657 PF04198 Putative sugar-binding domain AGROH133_13661 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13668 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13676 PF08402 TOBE domain AGROH133_13676 PF00005 ABC transporter AGROH133_13677 PF01232 Mannitol dehydrogenase Rossmann domain AGROH133_13677 PF08125 Mannitol dehydrogenase C-terminal domain AGROH133_13678 PF13419 Haloacid dehalogenase-like hydrolase AGROH133_13679 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AGROH133_13679 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AGROH133_13680 PF01380 SIS domain AGROH133_13680 PF01418 Helix-turn-helix domain, rpiR family AGROH133_13687 PF00633 Helix-hairpin-helix motif AGROH133_13687 PF00730 HhH-GPD superfamily base excision DNA repair protein AGROH133_13687 PF10576 Iron-sulfur binding domain of endonuclease III AGROH133_13691 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AGROH133_13691 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AGROH133_13693 PF13936 Helix-turn-helix domain AGROH133_13693 PF04198 Putative sugar-binding domain AGROH133_13695 PF00923 Transaldolase/Fructose-6-phosphate aldolase AGROH133_13696 PF09339 IclR helix-turn-helix domain AGROH133_13696 PF01614 Bacterial transcriptional regulator AGROH133_13699 PF07043 Protein of unknown function (DUF1328) AGROH133_13703 PF00950 ABC 3 transport family AGROH133_13712 PF00950 ABC 3 transport family AGROH133_13721 PF00005 ABC transporter AGROH133_13722 PF01297 Zinc-uptake complex component A periplasmic AGROH133_13727 PF01336 OB-fold nucleic acid binding domain AGROH133_13727 PF00152 tRNA synthetases class II (D, K and N) AGROH133_13728 PF00749 tRNA synthetases class I (E and Q), catalytic domain AGROH133_13729 PF03600 Citrate transporter AGROH133_13729 PF02080 TrkA-C domain AGROH133_13740 PF03471 Transporter associated domain AGROH133_13740 PF03741 Integral membrane protein TerC family AGROH133_13748 PF00440 Bacterial regulatory proteins, tetR family AGROH133_13750 PF13533 Biotin-lipoyl like AGROH133_13752 PF07690 Major Facilitator Superfamily AGROH133_13766 PF00356 Bacterial regulatory proteins, lacI family AGROH133_13766 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AGROH133_13768 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AGROH133_13768 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AGROH133_13769 PF01261 Xylose isomerase-like TIM barrel AGROH133_13771 PF00232 Glycosyl hydrolase family 1 AGROH133_13772 PF00881 Nitroreductase family AGROH133_13773 PF00005 ABC transporter AGROH133_13773 PF09383 NIL domain AGROH133_13774 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13780 PF03180 NLPA lipoprotein AGROH133_13782 PF03707 Bacterial signalling protein N terminal repeat AGROH133_13782 PF00563 EAL domain AGROH133_13782 PF13188 PAS domain AGROH133_13782 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_13786 PF00581 Rhodanese-like domain AGROH133_13786 PF17773 UPF0176 acylphosphatase like domain AGROH133_13788 PF01928 CYTH domain AGROH133_13789 PF01081 KDPG and KHG aldolase AGROH133_13795 PF03824 High-affinity nickel-transport protein AGROH133_13814 PF13505 Outer membrane protein beta-barrel domain AGROH133_13830 PF07683 Cobalamin synthesis protein cobW C-terminal domain AGROH133_13830 PF02492 CobW/HypB/UreG, nucleotide-binding domain AGROH133_13831 PF02633 Creatinine amidohydrolase AGROH133_13833 PF01047 MarR family AGROH133_13835 PF00356 Bacterial regulatory proteins, lacI family AGROH133_13838 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AGROH133_13838 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AGROH133_13839 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_13839 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_13840 PF04962 KduI/IolB family AGROH133_13841 PF01261 Xylose isomerase-like TIM barrel AGROH133_13842 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AGROH133_13842 PF00205 Thiamine pyrophosphate enzyme, central domain AGROH133_13842 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AGROH133_13843 PF00294 pfkB family carbohydrate kinase AGROH133_13846 PF00005 ABC transporter AGROH133_13847 PF12399 Branched-chain amino acid ATP-binding cassette transporter AGROH133_13847 PF00005 ABC transporter AGROH133_13866 PF13458 Periplasmic binding protein AGROH133_13871 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_13871 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13878 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13886 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_13888 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_13888 PF00005 ABC transporter AGROH133_13891 PF01261 Xylose isomerase-like TIM barrel AGROH133_13891 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AGROH133_13893 PF01220 Dehydroquinase class II AGROH133_13894 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AGROH133_13894 PF08501 Shikimate dehydrogenase substrate binding domain AGROH133_13895 PF00005 ABC transporter AGROH133_13896 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_13899 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_13902 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13908 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13914 PF00206 Lyase AGROH133_13914 PF10397 Adenylosuccinate lyase C-terminus AGROH133_13915 PF00775 Dioxygenase AGROH133_13916 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AGROH133_13916 PF00775 Dioxygenase AGROH133_13917 PF02627 Carboxymuconolactone decarboxylase family AGROH133_13919 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_13919 PF03466 LysR substrate binding domain AGROH133_13921 PF01494 FAD binding domain AGROH133_13924 PF09339 IclR helix-turn-helix domain AGROH133_13924 PF01614 Bacterial transcriptional regulator AGROH133_13926 PF01144 Coenzyme A transferase AGROH133_13927 PF01144 Coenzyme A transferase AGROH133_13928 PF02803 Thiolase, C-terminal domain AGROH133_13928 PF00108 Thiolase, N-terminal domain AGROH133_13929 PF00356 Bacterial regulatory proteins, lacI family AGROH133_13931 PF13407 Periplasmic binding protein domain AGROH133_13934 PF01261 Xylose isomerase-like TIM barrel AGROH133_13935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_13935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_13937 PF00356 Bacterial regulatory proteins, lacI family AGROH133_13939 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13946 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13953 PF17912 MalK OB fold domain AGROH133_13953 PF00005 ABC transporter AGROH133_13955 PF07470 Glycosyl Hydrolase Family 88 AGROH133_13961 PF00480 ROK family AGROH133_13964 PF00005 ABC transporter AGROH133_13964 PF17912 MalK OB fold domain AGROH133_13965 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13972 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_13979 PF03009 Glycerophosphoryl diester phosphodiesterase family AGROH133_13980 PF00459 Inositol monophosphatase family AGROH133_13982 PF00480 ROK family AGROH133_13984 PF01547 Bacterial extracellular solute-binding protein AGROH133_13987 PF08402 TOBE domain AGROH133_13987 PF00005 ABC transporter AGROH133_13988 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14003 PF00037 4Fe-4S binding domain AGROH133_14003 PF11953 Domain of unknown function (DUF3470) AGROH133_14004 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AGROH133_14004 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AGROH133_14012 PF08479 POTRA domain, ShlB-type AGROH133_14012 PF17287 POTRA domain AGROH133_14012 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AGROH133_14015 PF13332 Hemagglutinin repeat AGROH133_14015 PF05860 haemagglutination activity domain AGROH133_14015 PF04829 Pre-toxin domain with VENN motif AGROH133_14015 PF15526 Novel toxin 21 AGROH133_14015 PF15526 Novel toxin 21 AGROH133_14015 PF05860 haemagglutination activity domain AGROH133_14015 PF13332 Hemagglutinin repeat AGROH133_14015 PF04829 Pre-toxin domain with VENN motif AGROH133_14015 PF05594 Haemagluttinin repeat AGROH133_14015 PF05594 Haemagluttinin repeat AGROH133_14018 PF01527 Transposase AGROH133_14019 PF00665 Integrase core domain AGROH133_14021 PF01548 Transposase AGROH133_14021 PF02371 Transposase IS116/IS110/IS902 family AGROH133_14023 PF01548 Transposase AGROH133_14023 PF02371 Transposase IS116/IS110/IS902 family AGROH133_14024 PF13683 Integrase core domain AGROH133_14024 PF13276 HTH-like domain AGROH133_14025 PF01527 Transposase AGROH133_14027 PF13007 Transposase C of IS166 homeodomain AGROH133_14027 PF13005 zinc-finger binding domain of transposase IS66 AGROH133_14027 PF03050 Transposase IS66 family AGROH133_14027 PF13817 IS66 C-terminal element AGROH133_14045 PF03358 NADPH-dependent FMN reductase AGROH133_14045 PF01566 Natural resistance-associated macrophage protein AGROH133_14051 PF06628 Catalase-related immune-responsive AGROH133_14051 PF18011 C-terminal domain found in long catalases AGROH133_14051 PF00199 Catalase AGROH133_14052 PF05974 Domain of unknown function (DUF892) AGROH133_14062 PF04542 Sigma-70 region 2 AGROH133_14062 PF08281 Sigma-70, region 4 AGROH133_14064 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AGROH133_14064 PF00128 Alpha amylase, catalytic domain AGROH133_14064 PF11941 Domain of unknown function (DUF3459) AGROH133_14065 PF08323 Starch synthase catalytic domain AGROH133_14065 PF00534 Glycosyl transferases group 1 AGROH133_14083 PF00144 Beta-lactamase AGROH133_14087 PF07690 Major Facilitator Superfamily AGROH133_14097 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14097 PF03466 LysR substrate binding domain AGROH133_14100 PF02954 Bacterial regulatory protein, Fis family AGROH133_14100 PF00072 Response regulator receiver domain AGROH133_14100 PF14532 Sigma-54 interaction domain AGROH133_14102 PF13505 Outer membrane protein beta-barrel domain AGROH133_14105 PF00300 Histidine phosphatase superfamily (branch 1) AGROH133_14112 PF13657 HipA N-terminal domain AGROH133_14112 PF07804 HipA-like C-terminal domain AGROH133_14125 PF13614 AAA domain AGROH133_14125 PF00376 MerR family regulatory protein AGROH133_14126 PF07506 RepB plasmid partitioning protein AGROH133_14126 PF02195 ParB-like nuclease domain AGROH133_14127 PF03428 Replication protein C N-terminal domain AGROH133_14127 PF11800 Replication protein C C-terminal region AGROH133_14128 PF02515 CoA-transferase family III AGROH133_14129 PF00732 GMC oxidoreductase AGROH133_14129 PF05199 GMC oxidoreductase AGROH133_14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14130 PF03466 LysR substrate binding domain AGROH133_14132 PF03466 LysR substrate binding domain AGROH133_14132 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14137 PF00106 short chain dehydrogenase AGROH133_14141 PF03466 LysR substrate binding domain AGROH133_14141 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14144 PF12833 Helix-turn-helix domain AGROH133_14144 PF12852 Cupin AGROH133_14146 PF00106 short chain dehydrogenase AGROH133_14148 PF12728 Helix-turn-helix domain AGROH133_14148 PF02661 Fic/DOC family AGROH133_14153 PF03328 HpcH/HpaI aldolase/citrate lyase family AGROH133_14154 PF01557 Fumarylacetoacetate (FAA) hydrolase family AGROH133_14155 PF00775 Dioxygenase AGROH133_14155 PF04444 Catechol dioxygenase N terminus AGROH133_14165 PF11972 HTH DNA binding domain AGROH133_14165 PF07756 Protein of unknown function (DUF1612) AGROH133_14175 PF07690 Major Facilitator Superfamily AGROH133_14190 PF13533 Biotin-lipoyl like AGROH133_14194 PF03466 LysR substrate binding domain AGROH133_14194 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14196 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14196 PF03466 LysR substrate binding domain AGROH133_14200 PF02627 Carboxymuconolactone decarboxylase family AGROH133_14202 PF12833 Helix-turn-helix domain AGROH133_14205 PF00106 short chain dehydrogenase AGROH133_14210 PF00106 short chain dehydrogenase AGROH133_14221 PF03358 NADPH-dependent FMN reductase AGROH133_14222 PF00456 Transketolase, thiamine diphosphate binding domain AGROH133_14223 PF02780 Transketolase, C-terminal domain AGROH133_14223 PF02779 Transketolase, pyrimidine binding domain AGROH133_14224 PF00202 Aminotransferase class-III AGROH133_14230 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14237 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14246 PF00392 Bacterial regulatory proteins, gntR family AGROH133_14246 PF07729 FCD domain AGROH133_14247 PF00202 Aminotransferase class-III AGROH133_14248 PF01425 Amidase AGROH133_14249 PF00005 ABC transporter AGROH133_14249 PF08402 TOBE domain AGROH133_14250 PF00171 Aldehyde dehydrogenase family AGROH133_14251 PF00850 Histone deacetylase domain AGROH133_14253 PF00296 Luciferase-like monooxygenase AGROH133_14254 PF00106 short chain dehydrogenase AGROH133_14256 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14256 PF03466 LysR substrate binding domain AGROH133_14262 PF12833 Helix-turn-helix domain AGROH133_14262 PF06719 AraC-type transcriptional regulator N-terminus AGROH133_14266 PF02678 Pirin AGROH133_14266 PF05726 Pirin C-terminal cupin domain AGROH133_14267 PF03466 LysR substrate binding domain AGROH133_14267 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14269 PF03328 HpcH/HpaI aldolase/citrate lyase family AGROH133_14271 PF00202 Aminotransferase class-III AGROH133_14272 PF01037 Lrp/AsnC ligand binding domain AGROH133_14274 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_14276 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14284 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14284 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_14292 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_14292 PF00005 ABC transporter AGROH133_14295 PF03737 Aldolase/RraA AGROH133_14299 PF00392 Bacterial regulatory proteins, gntR family AGROH133_14299 PF07729 FCD domain AGROH133_14302 PF01494 FAD binding domain AGROH133_14303 PF03466 LysR substrate binding domain AGROH133_14303 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14305 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_14305 PF14765 Polyketide synthase dehydratase AGROH133_14305 PF00550 Phosphopantetheine attachment site AGROH133_14305 PF00698 Acyl transferase domain AGROH133_14305 PF08990 Erythronolide synthase docking AGROH133_14305 PF08659 KR domain AGROH133_14305 PF09277 Erythronolide synthase, docking AGROH133_14305 PF16197 Ketoacyl-synthetase C-terminal extension AGROH133_14305 PF00109 Beta-ketoacyl synthase, N-terminal domain AGROH133_14305 PF02801 Beta-ketoacyl synthase, C-terminal domain AGROH133_14306 PF01638 HxlR-like helix-turn-helix AGROH133_14308 PF08361 MAATS-type transcriptional repressor, C-terminal region AGROH133_14308 PF00440 Bacterial regulatory proteins, tetR family AGROH133_14311 PF03466 LysR substrate binding domain AGROH133_14311 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14315 PF00248 Aldo/keto reductase family AGROH133_14319 PF03466 LysR substrate binding domain AGROH133_14319 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14321 PF01526 Tn3 transposase DDE domain AGROH133_14321 PF13700 Domain of unknown function (DUF4158) AGROH133_14322 PF00176 SNF2 family N-terminal domain AGROH133_14322 PF00271 Helicase conserved C-terminal domain AGROH133_14324 PF00106 short chain dehydrogenase AGROH133_14335 PF02627 Carboxymuconolactone decarboxylase family AGROH133_14336 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14336 PF03466 LysR substrate binding domain AGROH133_14338 PF00072 Response regulator receiver domain AGROH133_14338 PF00196 Bacterial regulatory proteins, luxR family AGROH133_14339 PF08447 PAS fold AGROH133_14339 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_14339 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_14339 PF13426 PAS domain AGROH133_14339 PF13493 Domain of unknown function (DUF4118) AGROH133_14339 PF00989 PAS fold AGROH133_14341 PF00753 Metallo-beta-lactamase superfamily AGROH133_14346 PF00274 Fructose-bisphosphate aldolase class-I AGROH133_14357 PF07859 alpha/beta hydrolase fold AGROH133_14359 PF01638 HxlR-like helix-turn-helix AGROH133_14360 PF00440 Bacterial regulatory proteins, tetR family AGROH133_14361 PF07690 Major Facilitator Superfamily AGROH133_14377 PF01177 Asp/Glu/Hydantoin racemase AGROH133_14378 PF14525 AraC-binding-like domain AGROH133_14378 PF12833 Helix-turn-helix domain AGROH133_14380 PF00106 short chain dehydrogenase AGROH133_14387 PF01292 Prokaryotic cytochrome b561 AGROH133_14392 PF00174 Oxidoreductase molybdopterin binding domain AGROH133_14403 PF02153 Prephenate dehydrogenase AGROH133_14403 PF01817 Chorismate mutase type II AGROH133_14404 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14404 PF03466 LysR substrate binding domain AGROH133_14406 PF00106 short chain dehydrogenase AGROH133_14407 PF00561 alpha/beta hydrolase fold AGROH133_14409 PF03734 L,D-transpeptidase catalytic domain AGROH133_14409 PF17969 L,D-transpeptidase C-terminal domain AGROH133_14415 PF01042 Endoribonuclease L-PSP AGROH133_14418 PF00248 Aldo/keto reductase family AGROH133_14423 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14423 PF03466 LysR substrate binding domain AGROH133_14427 PF02661 Fic/DOC family AGROH133_14427 PF13784 Fic/DOC family N-terminal AGROH133_14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14430 PF03466 LysR substrate binding domain AGROH133_14432 PF00106 short chain dehydrogenase AGROH133_14436 PF00561 alpha/beta hydrolase fold AGROH133_14447 PF03358 NADPH-dependent FMN reductase AGROH133_14451 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_14451 PF13823 Alcohol dehydrogenase GroES-associated AGROH133_14451 PF00107 Zinc-binding dehydrogenase AGROH133_14452 PF00106 short chain dehydrogenase AGROH133_14456 PF03358 NADPH-dependent FMN reductase AGROH133_14469 PF07992 Pyridine nucleotide-disulphide oxidoreductase AGROH133_14471 PF06628 Catalase-related immune-responsive AGROH133_14471 PF00199 Catalase AGROH133_14471 PF18011 C-terminal domain found in long catalases AGROH133_14472 PF05974 Domain of unknown function (DUF892) AGROH133_14473 PF05974 Domain of unknown function (DUF892) AGROH133_14476 PF11941 Domain of unknown function (DUF3459) AGROH133_14476 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AGROH133_14476 PF00128 Alpha amylase, catalytic domain AGROH133_14477 PF00128 Alpha amylase, catalytic domain AGROH133_14477 PF11941 Domain of unknown function (DUF3459) AGROH133_14478 PF01022 Bacterial regulatory protein, arsR family AGROH133_14496 PF00106 short chain dehydrogenase AGROH133_14499 PF13823 Alcohol dehydrogenase GroES-associated AGROH133_14499 PF00107 Zinc-binding dehydrogenase AGROH133_14499 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_14505 PF02735 Ku70/Ku80 beta-barrel domain AGROH133_14506 PF02735 Ku70/Ku80 beta-barrel domain AGROH133_14508 PF01068 ATP dependent DNA ligase domain AGROH133_14508 PF04679 ATP dependent DNA ligase C terminal region AGROH133_14508 PF13298 DNA polymerase Ligase (LigD) AGROH133_14512 PF00118 TCP-1/cpn60 chaperonin family AGROH133_14513 PF00166 Chaperonin 10 Kd subunit AGROH133_14514 PF06233 Usg-like family AGROH133_14516 PF00011 Hsp20/alpha crystallin family AGROH133_14519 PF03861 ANTAR domain AGROH133_14519 PF00072 Response regulator receiver domain AGROH133_14520 PF00072 Response regulator receiver domain AGROH133_14520 PF00486 Transcriptional regulatory protein, C terminal AGROH133_14521 PF13426 PAS domain AGROH133_14521 PF08447 PAS fold AGROH133_14521 PF07536 HWE histidine kinase AGROH133_14526 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_14526 PF13426 PAS domain AGROH133_14526 PF00072 Response regulator receiver domain AGROH133_14534 PF01546 Peptidase family M20/M25/M40 AGROH133_14534 PF07687 Peptidase dimerisation domain AGROH133_14535 PF04229 GrpB protein AGROH133_14535 PF13673 Acetyltransferase (GNAT) domain AGROH133_14536 PF00004 ATPase family associated with various cellular activities (AAA) AGROH133_14536 PF05362 Lon protease (S16) C-terminal proteolytic domain AGROH133_14536 PF02190 ATP-dependent protease La (LON) substrate-binding domain AGROH133_14540 PF00356 Bacterial regulatory proteins, lacI family AGROH133_14542 PF00701 Dihydrodipicolinate synthetase family AGROH133_14543 PF07690 Major Facilitator Superfamily AGROH133_14555 PF02661 Fic/DOC family AGROH133_14555 PF12728 Helix-turn-helix domain AGROH133_14556 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AGROH133_14562 PF00440 Bacterial regulatory proteins, tetR family AGROH133_14568 PF00561 alpha/beta hydrolase fold AGROH133_14571 PF02311 AraC-like ligand binding domain AGROH133_14571 PF12833 Helix-turn-helix domain AGROH133_14573 PF09957 Bacterial antitoxin of type II TA system, VapB AGROH133_14574 PF01850 PIN domain AGROH133_14578 PF07478 D-ala D-ala ligase C-terminus AGROH133_14578 PF01820 D-ala D-ala ligase N-terminus AGROH133_14590 PF00196 Bacterial regulatory proteins, luxR family AGROH133_14590 PF03472 Autoinducer binding domain AGROH133_14592 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_14592 PF07694 5TMR of 5TMR-LYT AGROH133_14600 PF00360 Phytochrome region AGROH133_14600 PF00990 Diguanylate cyclase, GGDEF domain AGROH133_14600 PF00563 EAL domain AGROH133_14600 PF01590 GAF domain AGROH133_14608 PF00155 Aminotransferase class I and II AGROH133_14608 PF00392 Bacterial regulatory proteins, gntR family AGROH133_14612 PF00795 Carbon-nitrogen hydrolase AGROH133_14613 PF04055 Radical SAM superfamily AGROH133_14613 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AGROH133_14615 PF00586 AIR synthase related protein, N-terminal domain AGROH133_14615 PF02769 AIR synthase related protein, C-terminal domain AGROH133_14619 PF00672 HAMP domain AGROH133_14619 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AGROH133_14625 PF01068 ATP dependent DNA ligase domain AGROH133_14625 PF04679 ATP dependent DNA ligase C terminal region AGROH133_14625 PF13298 DNA polymerase Ligase (LigD) AGROH133_14628 PF02811 PHP domain AGROH133_14628 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AGROH133_14628 PF07733 Bacterial DNA polymerase III alpha NTPase domain AGROH133_14628 PF14579 Helix-hairpin-helix motif AGROH133_14636 PF08401 Domain of unknown function (DUF1738) AGROH133_14636 PF18818 Metallopeptidase superfamily domain AGROH133_14637 PF04229 GrpB protein AGROH133_14637 PF13673 Acetyltransferase (GNAT) domain AGROH133_14639 PF05284 Protein of unknown function (DUF736) AGROH133_14641 PF00589 Phage integrase family AGROH133_14641 PF13495 Phage integrase, N-terminal SAM-like domain AGROH133_14649 PF01638 HxlR-like helix-turn-helix AGROH133_14652 PF00216 Bacterial DNA-binding protein AGROH133_14653 PF05406 WGR domain AGROH133_14658 PF02534 Type IV secretory system Conjugative DNA transfer AGROH133_14665 PF17841 BID domain of Bartonella effector protein (Bep) AGROH133_14665 PF01443 Viral (Superfamily 1) RNA helicase AGROH133_14665 PF03389 MobA/MobL family AGROH133_14670 PF00589 Phage integrase family AGROH133_14670 PF02899 Phage integrase, N-terminal SAM-like domain AGROH133_14683 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AGROH133_14685 PF00589 Phage integrase family AGROH133_14685 PF02899 Phage integrase, N-terminal SAM-like domain AGROH133_14689 PF02899 Phage integrase, N-terminal SAM-like domain AGROH133_14689 PF00589 Phage integrase family AGROH133_14693 PF00155 Aminotransferase class I and II AGROH133_14695 PF00072 Response regulator receiver domain AGROH133_14695 PF00486 Transcriptional regulatory protein, C terminal AGROH133_14698 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AGROH133_14698 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AGROH133_14698 PF00205 Thiamine pyrophosphate enzyme, central domain AGROH133_14699 PF00202 Aminotransferase class-III AGROH133_14701 PF00005 ABC transporter AGROH133_14701 PF08402 TOBE domain AGROH133_14702 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14710 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14717 PF13416 Bacterial extracellular solute-binding protein AGROH133_14721 PF00005 ABC transporter AGROH133_14722 PF02687 FtsX-like permease family AGROH133_14722 PF12704 MacB-like periplasmic core domain AGROH133_14737 PF09339 IclR helix-turn-helix domain AGROH133_14737 PF01614 Bacterial transcriptional regulator AGROH133_14738 PF00171 Aldehyde dehydrogenase family AGROH133_14739 PF00465 Iron-containing alcohol dehydrogenase AGROH133_14740 PF00753 Metallo-beta-lactamase superfamily AGROH133_14742 PF00106 short chain dehydrogenase AGROH133_14743 PF07729 FCD domain AGROH133_14743 PF00392 Bacterial regulatory proteins, gntR family AGROH133_14745 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14753 PF08402 TOBE domain AGROH133_14753 PF00005 ABC transporter AGROH133_14756 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14763 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14771 PF01613 Flavin reductase like domain AGROH133_14787 PF04956 TrbC/VIRB2 family AGROH133_14792 PF05101 Type IV secretory pathway, VirB3-like protein AGROH133_14794 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AGROH133_14795 PF07996 Type IV secretion system proteins AGROH133_14798 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AGROH133_14805 PF04335 VirB8 protein AGROH133_14807 PF03524 Conjugal transfer protein AGROH133_14809 PF03743 Bacterial conjugation TrbI-like protein AGROH133_14811 PF00437 Type II/IV secretion system protein AGROH133_14812 PF01022 Bacterial regulatory protein, arsR family AGROH133_14815 PF14760 Rnk N-terminus AGROH133_14815 PF01272 Transcription elongation factor, GreA/GreB, C-term AGROH133_14817 PF03449 Transcription elongation factor, N-terminal AGROH133_14817 PF01272 Transcription elongation factor, GreA/GreB, C-term AGROH133_14826 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AGROH133_14826 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AGROH133_14832 PF00072 Response regulator receiver domain AGROH133_14832 PF13426 PAS domain AGROH133_14832 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_14833 PF08447 PAS fold AGROH133_14833 PF07536 HWE histidine kinase AGROH133_14833 PF13426 PAS domain AGROH133_14835 PF00226 DnaJ domain AGROH133_14838 PF01850 PIN domain AGROH133_14839 PF00701 Dihydrodipicolinate synthetase family AGROH133_14840 PF08450 SMP-30/Gluconolactonase/LRE-like region AGROH133_14841 PF07729 FCD domain AGROH133_14841 PF00392 Bacterial regulatory proteins, gntR family AGROH133_14845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_14848 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14855 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14855 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_14862 PF00005 ABC transporter AGROH133_14862 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_14863 PF13378 Enolase C-terminal domain-like AGROH133_14863 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AGROH133_14871 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14885 PF08402 TOBE domain AGROH133_14885 PF00005 ABC transporter AGROH133_14886 PF00459 Inositol monophosphatase family AGROH133_14887 PF01594 AI-2E family transporter AGROH133_14898 PF05035 2-keto-3-deoxy-galactonokinase AGROH133_14899 PF00701 Dihydrodipicolinate synthetase family AGROH133_14900 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AGROH133_14900 PF13378 Enolase C-terminal domain-like AGROH133_14903 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14910 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_14918 PF17912 MalK OB fold domain AGROH133_14918 PF00005 ABC transporter AGROH133_14920 PF09339 IclR helix-turn-helix domain AGROH133_14920 PF01614 Bacterial transcriptional regulator AGROH133_14923 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AGROH133_14923 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AGROH133_14924 PF02311 AraC-like ligand binding domain AGROH133_14924 PF12833 Helix-turn-helix domain AGROH133_14929 PF03466 LysR substrate binding domain AGROH133_14929 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14931 PF00248 Aldo/keto reductase family AGROH133_14933 PF03466 LysR substrate binding domain AGROH133_14933 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_14935 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_14935 PF00107 Zinc-binding dehydrogenase AGROH133_14936 PF12833 Helix-turn-helix domain AGROH133_14936 PF12852 Cupin AGROH133_14937 PF00106 short chain dehydrogenase AGROH133_14943 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AGROH133_14943 PF00529 HlyD membrane-fusion protein of T1SS AGROH133_14945 PF00005 ABC transporter AGROH133_14952 PF02321 Outer membrane efflux protein AGROH133_14959 PF00892 EamA-like transporter family AGROH133_14964 PF00202 Aminotransferase class-III AGROH133_14968 PF00072 Response regulator receiver domain AGROH133_14968 PF00486 Transcriptional regulatory protein, C terminal AGROH133_14969 PF00672 HAMP domain AGROH133_14969 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_14969 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_14975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AGROH133_14976 PF00005 ABC transporter AGROH133_14976 PF12704 MacB-like periplasmic core domain AGROH133_14976 PF02687 FtsX-like permease family AGROH133_14981 PF00583 Acetyltransferase (GNAT) family AGROH133_14987 PF07690 Major Facilitator Superfamily AGROH133_15003 PF00072 Response regulator receiver domain AGROH133_15003 PF00486 Transcriptional regulatory protein, C terminal AGROH133_15005 PF00529 HlyD membrane-fusion protein of T1SS AGROH133_15005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AGROH133_15007 PF00873 AcrB/AcrD/AcrF family AGROH133_15023 PF00005 ABC transporter AGROH133_15024 PF01032 FecCD transport family AGROH133_15036 PF00356 Bacterial regulatory proteins, lacI family AGROH133_15036 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AGROH133_15038 PF01261 Xylose isomerase-like TIM barrel AGROH133_15039 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_15039 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_15040 PF01261 Xylose isomerase-like TIM barrel AGROH133_15050 PF07238 PilZ domain AGROH133_15050 PF03552 Cellulose synthase AGROH133_15050 PF00535 Glycosyl transferase family 2 AGROH133_15062 PF08267 Cobalamin-independent synthase, N-terminal domain AGROH133_15062 PF01717 Cobalamin-independent synthase, Catalytic domain AGROH133_15065 PF00106 short chain dehydrogenase AGROH133_15066 PF04198 Putative sugar-binding domain AGROH133_15068 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AGROH133_15068 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AGROH133_15069 PF02779 Transketolase, pyrimidine binding domain AGROH133_15069 PF02780 Transketolase, C-terminal domain AGROH133_15070 PF00456 Transketolase, thiamine diphosphate binding domain AGROH133_15071 PF02653 Branched-chain amino acid transport system / permease component AGROH133_15080 PF13407 Periplasmic binding protein domain AGROH133_15082 PF00005 ABC transporter AGROH133_15084 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AGROH133_15086 PF00072 Response regulator receiver domain AGROH133_15086 PF13188 PAS domain AGROH133_15086 PF00512 His Kinase A (phospho-acceptor) domain AGROH133_15086 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AGROH133_15086 PF08448 PAS fold AGROH133_15087 PF06745 KaiC AGROH133_15088 PF02678 Pirin AGROH133_15088 PF17954 Quercetinase C-terminal cupin domain AGROH133_15089 PF00857 Isochorismatase family AGROH133_15090 PF03466 LysR substrate binding domain AGROH133_15090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_15092 PF01638 HxlR-like helix-turn-helix AGROH133_15093 PF00550 Phosphopantetheine attachment site AGROH133_15093 PF14765 Polyketide synthase dehydratase AGROH133_15093 PF00107 Zinc-binding dehydrogenase AGROH133_15093 PF02801 Beta-ketoacyl synthase, C-terminal domain AGROH133_15093 PF16197 Ketoacyl-synthetase C-terminal extension AGROH133_15093 PF00698 Acyl transferase domain AGROH133_15093 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_15093 PF08659 KR domain AGROH133_15093 PF00109 Beta-ketoacyl synthase, N-terminal domain AGROH133_15094 PF03466 LysR substrate binding domain AGROH133_15094 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_15099 PF00042 Globin AGROH133_15099 PF00970 Oxidoreductase FAD-binding domain AGROH133_15099 PF00175 Oxidoreductase NAD-binding domain AGROH133_15100 PF02798 Glutathione S-transferase, N-terminal domain AGROH133_15101 PF00171 Aldehyde dehydrogenase family AGROH133_15102 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_15102 PF03466 LysR substrate binding domain AGROH133_15108 PF08220 DeoR-like helix-turn-helix domain AGROH133_15108 PF00455 DeoR C terminal sensor domain AGROH133_15110 PF13407 Periplasmic binding protein domain AGROH133_15112 PF00005 ABC transporter AGROH133_15113 PF02653 Branched-chain amino acid transport system / permease component AGROH133_15124 PF02653 Branched-chain amino acid transport system / permease component AGROH133_15136 PF00294 pfkB family carbohydrate kinase AGROH133_15136 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AGROH133_15137 PF01791 DeoC/LacD family aldolase AGROH133_15138 PF00171 Aldehyde dehydrogenase family AGROH133_15140 PF01810 LysE type translocator AGROH133_15148 PF00795 Carbon-nitrogen hydrolase AGROH133_15149 PF00005 ABC transporter AGROH133_15149 PF09383 NIL domain AGROH133_15150 PF00005 ABC transporter AGROH133_15150 PF12399 Branched-chain amino acid ATP-binding cassette transporter AGROH133_15161 PF02653 Branched-chain amino acid transport system / permease component AGROH133_15171 PF13458 Periplasmic binding protein AGROH133_15192 PF00924 Mechanosensitive ion channel AGROH133_15208 PF13533 Biotin-lipoyl like AGROH133_15227 PF06719 AraC-type transcriptional regulator N-terminus AGROH133_15227 PF12833 Helix-turn-helix domain AGROH133_15230 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AGROH133_15231 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AGROH133_15232 PF00459 Inositol monophosphatase family AGROH133_15235 PF01546 Peptidase family M20/M25/M40 AGROH133_15236 PF00455 DeoR C terminal sensor domain AGROH133_15236 PF08220 DeoR-like helix-turn-helix domain AGROH133_15238 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AGROH133_15238 PF00005 ABC transporter AGROH133_15239 PF12911 N-terminal TM domain of oligopeptide transport permease C AGROH133_15239 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_15246 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_15254 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AGROH133_15259 PF00005 ABC transporter AGROH133_15259 PF17912 MalK OB fold domain AGROH133_15260 PF08240 Alcohol dehydrogenase GroES-like domain AGROH133_15260 PF00107 Zinc-binding dehydrogenase AGROH133_15261 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_15269 PF00528 Binding-protein-dependent transport system inner membrane component AGROH133_15277 PF01547 Bacterial extracellular solute-binding protein AGROH133_15293 PF12833 Helix-turn-helix domain AGROH133_15295 PF07715 TonB-dependent Receptor Plug Domain AGROH133_15295 PF00593 TonB dependent receptor AGROH133_15298 PF00183 Hsp90 protein AGROH133_15299 PF13649 Methyltransferase domain AGROH133_15300 PF01161 Phosphatidylethanolamine-binding protein AGROH133_15315 PF03466 LysR substrate binding domain AGROH133_15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_15317 PF02627 Carboxymuconolactone decarboxylase family AGROH133_15328 PF12951 Passenger-associated-transport-repeat AGROH133_15330 PF12833 Helix-turn-helix domain AGROH133_15330 PF12852 Cupin AGROH133_15331 PF03466 LysR substrate binding domain AGROH133_15331 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AGROH133_15335 PF03466 LysR substrate binding domain AGROH133_15336 PF00248 Aldo/keto reductase family AGROH133_15344 PF00313 'Cold-shock' DNA-binding domain AGROH133_15347 PF01225 Mur ligase family, catalytic domain AGROH133_15347 PF02875 Mur ligase family, glutamate ligase domain AGROH133_15347 PF08245 Mur ligase middle domain AGROH133_15348 PF13533 Biotin-lipoyl like AGROH133_15350 PF03412 Peptidase C39 family AGROH133_15350 PF00005 ABC transporter AGROH133_15350 PF00664 ABC transporter transmembrane region AGROH133_15356 PF02321 Outer membrane efflux protein AGROH133_15358 PF01810 LysE type translocator AGROH133_15366 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AGROH133_15366 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AGROH133_15367 PF00005 ABC transporter AGROH133_15371 PF00497 Bacterial extracellular solute-binding proteins, family 3 AGROH133_15373 PF00356 Bacterial regulatory proteins, lacI family