locus-tag class description At12D13_00010 PF00308 Bacterial dnaA protein At12D13_00010 PF08299 Bacterial dnaA protein helix-turn-helix At12D13_00010 PF11638 DnaA N-terminal domain At12D13_00020 PF06969 HemN C-terminal domain At12D13_00020 PF04055 Radical SAM superfamily At12D13_00030 PF01725 Ham1 family At12D13_00040 PF03725 3' exoribonuclease family, domain 2 At12D13_00040 PF01138 3' exoribonuclease family, domain 1 At12D13_00050 PF01628 HrcA protein C terminal domain At12D13_00060 PF01025 GrpE At12D13_00070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 At12D13_00080 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein At12D13_00080 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus At12D13_00090 PF04963 Sigma-54 factor, core binding domain At12D13_00090 PF00309 Sigma-54 factor, Activator interacting domain (AID) At12D13_00090 PF04552 Sigma-54, DNA binding domain At12D13_00100 PF00005 ABC transporter At12D13_00110 PF03968 OstA-like protein At12D13_00130 PF01343 Peptidase family S49 At12D13_00140 PF00216 Bacterial DNA-binding protein At12D13_00160 PF02926 THUMP domain At12D13_00160 PF01170 Putative RNA methylase family UPF0020 At12D13_00160 PF10672 S-adenosylmethionine-dependent methyltransferase At12D13_00170 PF08032 RNA 2'-O ribose methyltransferase substrate binding At12D13_00170 PF00588 SpoU rRNA Methylase family At12D13_00180 PF01252 Signal peptidase (SPase) II At12D13_00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_00190 PF00072 Response regulator receiver domain At12D13_00190 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) At12D13_00190 PF00512 His Kinase A (phospho-acceptor) domain At12D13_00190 PF01627 Hpt domain At12D13_00190 PF00672 HAMP domain At12D13_00210 PF00488 MutS domain V At12D13_00210 PF05190 MutS family domain IV At12D13_00210 PF05192 MutS domain III At12D13_00210 PF05188 MutS domain II At12D13_00210 PF01624 MutS domain I At12D13_00220 PF01966 HD domain At12D13_00220 PF01842 ACT domain At12D13_00220 PF08335 GlnD PII-uridylyltransferase At12D13_00220 PF01909 Nucleotidyltransferase domain At12D13_00230 PF03023 Lipid II flippase MurJ At12D13_00250 PF00579 tRNA synthetases class I (W and Y) At12D13_00270 PF01106 NifU-like domain At12D13_00280 PF00814 Glycoprotease family At12D13_00290 PF00583 Acetyltransferase (GNAT) family At12D13_00290 PF13508 Acetyltransferase (GNAT) domain At12D13_00300 PF01475 Ferric uptake regulator family At12D13_00310 PF01553 Acyltransferase At12D13_00320 PF04055 Radical SAM superfamily At12D13_00320 PF00919 Uncharacterized protein family UPF0004 At12D13_00320 PF01938 TRAM domain At12D13_00330 PF02562 PhoH-like protein At12D13_00340 PF02130 Uncharacterized protein family UPF0054 At12D13_00350 PF03471 Transporter associated domain At12D13_00350 PF00571 CBS domain At12D13_00360 PF00795 Carbon-nitrogen hydrolase At12D13_00370 PF01381 Helix-turn-helix At12D13_00380 PF02773 S-adenosylmethionine synthetase, C-terminal domain At12D13_00380 PF02772 S-adenosylmethionine synthetase, central domain At12D13_00380 PF00438 S-adenosylmethionine synthetase, N-terminal domain At12D13_00390 PF02390 Putative methyltransferase At12D13_00400 PF00294 pfkB family carbohydrate kinase At12D13_00410 PF02646 RmuC family At12D13_00420 PF01327 Polypeptide deformylase At12D13_00430 PF02911 Formyl transferase, C-terminal domain At12D13_00430 PF00551 Formyl transferase At12D13_00440 PF01416 tRNA pseudouridine synthase At12D13_00460 PF07687 Peptidase dimerisation domain At12D13_00460 PF01546 Peptidase family M20/M25/M40 At12D13_00470 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal At12D13_00470 PF14602 Hexapeptide repeat of succinyl-transferase At12D13_00470 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_00490 PF00672 HAMP domain At12D13_00490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_00500 PF01156 Inosine-uridine preferring nucleoside hydrolase At12D13_00510 PF00011 Hsp20/alpha crystallin family At12D13_00560 PF00696 Amino acid kinase family At12D13_00580 PF01926 50S ribosome-binding GTPase At12D13_00590 PF02096 60Kd inner membrane protein At12D13_00590 PF14849 YidC periplasmic domain At12D13_00600 PF00825 Ribonuclease P At12D13_00610 PF00672 HAMP domain At12D13_00610 PF02203 Tar ligand binding domain homologue At12D13_00610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_00620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_00620 PF00512 His Kinase A (phospho-acceptor) domain At12D13_00660 PF00075 RNase H At12D13_00710 PF02796 Helix-turn-helix domain of resolvase At12D13_00710 PF00239 Resolvase, N terminal domain At12D13_00730 PF00145 C-5 cytosine-specific DNA methylase At12D13_00750 PF01209 ubiE/COQ5 methyltransferase family At12D13_00760 PF00005 ABC transporter At12D13_00770 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_00780 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_00800 PF00149 Calcineurin-like phosphoesterase At12D13_00810 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain At12D13_00810 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain At12D13_00830 PF05544 Proline racemase At12D13_00840 PF01979 Amidohydrolase family At12D13_00850 PF00156 Phosphoribosyl transferase domain At12D13_00860 PF00294 pfkB family carbohydrate kinase At12D13_00890 PF00342 Phosphoglucose isomerase At12D13_00900 PF00501 AMP-binding enzyme At12D13_00900 PF13193 AMP-binding enzyme C-terminal domain At12D13_00910 PF00005 ABC transporter At12D13_00910 PF08402 TOBE domain At12D13_00930 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_00950 PF00593 TonB dependent receptor At12D13_00950 PF07715 TonB-dependent Receptor Plug Domain At12D13_00990 PF01679 Proteolipid membrane potential modulator At12D13_01010 PF00239 Resolvase, N terminal domain At12D13_01010 PF02796 Helix-turn-helix domain of resolvase At12D13_01070 PF03976 Polyphosphate kinase 2 (PPK2) At12D13_01080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_01080 PF00512 His Kinase A (phospho-acceptor) domain At12D13_01080 PF00989 PAS fold At12D13_01080 PF16736 Single Cache-like At12D13_01090 PF12849 PBP superfamily domain At12D13_01100 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_01110 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_01120 PF00005 ABC transporter At12D13_01130 PF01895 PhoU domain At12D13_01140 PF00072 Response regulator receiver domain At12D13_01140 PF00486 Transcriptional regulatory protein, C terminal At12D13_01160 PF00202 Aminotransferase class-III At12D13_01170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain At12D13_01170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain At12D13_01180 PF01430 Hsp33 protein At12D13_01190 PF04379 ApaG domain At12D13_01200 PF01053 Cys/Met metabolism PLP-dependent enzyme At12D13_01210 PF00692 dUTPase At12D13_01220 PF02469 Fasciclin domain At12D13_01260 PF00230 Major intrinsic protein At12D13_01340 PF00072 Response regulator receiver domain At12D13_01340 PF00196 Bacterial regulatory proteins, luxR family At12D13_01360 PF01180 Dihydroorotate dehydrogenase At12D13_01430 PF02082 Transcriptional regulator At12D13_01440 PF00271 Helicase conserved C-terminal domain At12D13_01440 PF08494 DEAD/H associated At12D13_01440 PF00270 DEAD/DEAH box helicase At12D13_01480 PF01925 Sulfite exporter TauE/SafE At12D13_01500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_01500 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_01500 PF12806 Acetyl-CoA dehydrogenase C-terminal like At12D13_01500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_01510 PF00108 Thiolase, N-terminal domain At12D13_01510 PF02803 Thiolase, C-terminal domain At12D13_01520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain At12D13_01520 PF00378 Enoyl-CoA hydratase/isomerase At12D13_01520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain At12D13_01550 PF03334 Na+/H+ antiporter subunit At12D13_01560 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) At12D13_01570 PF01899 Na+/H+ ion antiporter subunit At12D13_01580 PF00361 Proton-conducting membrane transporter At12D13_01590 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At12D13_01600 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter At12D13_01600 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus At12D13_01600 PF00361 Proton-conducting membrane transporter At12D13_01600 PF13244 Domain of unknown function (DUF4040) At12D13_01620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_01650 PF01584 CheW-like domain At12D13_01650 PF02895 Signal transducing histidine kinase, homodimeric domain At12D13_01650 PF01627 Hpt domain At12D13_01650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_01660 PF01739 CheR methyltransferase, SAM binding domain At12D13_01660 PF03705 CheR methyltransferase, all-alpha domain At12D13_01670 PF00072 Response regulator receiver domain At12D13_01670 PF01339 CheB methylesterase At12D13_01680 PF00072 Response regulator receiver domain At12D13_01690 PF03975 CheD chemotactic sensory transduction At12D13_01710 PF01514 Secretory protein of YscJ/FliF family At12D13_01710 PF08345 Flagellar M-ring protein C-terminal At12D13_01720 PF03472 Autoinducer binding domain At12D13_01720 PF00196 Bacterial regulatory proteins, luxR family At12D13_01740 PF00672 HAMP domain At12D13_01740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_01750 PF00072 Response regulator receiver domain At12D13_01750 PF00672 HAMP domain At12D13_01750 PF00512 His Kinase A (phospho-acceptor) domain At12D13_01750 PF01627 Hpt domain At12D13_01750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_01760 PF01741 Large-conductance mechanosensitive channel, MscL At12D13_01770 PF00155 Aminotransferase class I and II At12D13_01780 PF01370 NAD dependent epimerase/dehydratase family At12D13_01800 PF03884 DNA gyrase inhibitor YacG At12D13_01810 PF02545 Maf-like protein At12D13_01820 PF01176 Translation initiation factor 1A / IF-1 At12D13_01840 PF06793 Uncharacterised protein family (UPF0262) At12D13_01850 PF00815 Histidinol dehydrogenase At12D13_01870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) At12D13_01890 PF00700 Bacterial flagellin C-terminal helical region At12D13_01890 PF00669 Bacterial flagellin N-terminal helical region At12D13_01900 PF00700 Bacterial flagellin C-terminal helical region At12D13_01900 PF00669 Bacterial flagellin N-terminal helical region At12D13_01910 PF00700 Bacterial flagellin C-terminal helical region At12D13_01910 PF00669 Bacterial flagellin N-terminal helical region At12D13_01920 PF00813 FliP family At12D13_01940 PF02107 Flagellar L-ring protein At12D13_01960 PF02119 Flagellar P-ring protein At12D13_01970 PF13144 Chaperone for flagella basal body P-ring formation At12D13_01980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At12D13_01980 PF00460 Flagella basal body rod protein At12D13_01990 PF02049 Flagellar hook-basal body complex protein FliE At12D13_02000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At12D13_02010 PF00460 Flagella basal body rod protein At12D13_02030 PF18269 T3SS EscN ATPase C-terminal domain At12D13_02030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At12D13_02040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At12D13_02040 PF00460 Flagella basal body rod protein At12D13_02060 PF01618 MotA/TolQ/ExbB proton channel family At12D13_02070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term At12D13_02080 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term At12D13_02090 PF14842 FliG N-terminal domain At12D13_02090 PF01706 FliG C-terminal domain At12D13_02090 PF14841 FliG middle domain At12D13_02100 PF01312 FlhB HrpN YscU SpaS Family At12D13_02120 PF00669 Bacterial flagellin N-terminal helical region At12D13_02120 PF00700 Bacterial flagellin C-terminal helical region At12D13_02140 PF00691 OmpA family At12D13_02140 PF13677 Membrane MotB of proton-channel complex MotA/MotB At12D13_02160 PF02120 Flagellar hook-length control protein FliK At12D13_02180 PF00486 Transcriptional regulatory protein, C terminal At12D13_02190 PF07559 Flagellar basal body protein FlaE At12D13_02190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At12D13_02190 PF00460 Flagella basal body rod protein At12D13_02230 PF07378 Flagellar protein FlbT At12D13_02240 PF03963 Flagellar hook capping protein - N-terminal region At12D13_02250 PF01313 Bacterial export proteins, family 3 At12D13_02260 PF00771 FHIPEP family At12D13_02270 PF01311 Bacterial export proteins, family 1 At12D13_02340 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain At12D13_02340 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain At12D13_02350 PF00356 Bacterial regulatory proteins, lacI family At12D13_02360 PF01547 Bacterial extracellular solute-binding protein At12D13_02370 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_02380 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_02390 PF00128 Alpha amylase, catalytic domain At12D13_02400 PF00005 ABC transporter At12D13_02400 PF17912 MalK OB fold domain At12D13_02400 PF03459 TOBE domain At12D13_02420 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH At12D13_02440 PF00920 Dehydratase family At12D13_02450 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase At12D13_02460 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain At12D13_02460 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain At12D13_02470 PF01266 FAD dependent oxidoreductase At12D13_02480 PF00120 Glutamine synthetase, catalytic domain At12D13_02530 PF00463 Isocitrate lyase family At12D13_02540 PF09856 Predicted transcriptional regulator (DUF2083) At12D13_02540 PF06114 IrrE N-terminal-like domain At12D13_02540 PF01381 Helix-turn-helix At12D13_02550 PF13416 Bacterial extracellular solute-binding protein At12D13_02560 PF00005 ABC transporter At12D13_02560 PF08402 TOBE domain At12D13_02570 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_02580 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_02600 PF13426 PAS domain At12D13_02600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_02600 PF00512 His Kinase A (phospho-acceptor) domain At12D13_02600 PF00989 PAS fold At12D13_02600 PF13188 PAS domain At12D13_02610 PF02541 Ppx/GppA phosphatase family At12D13_02620 PF01728 FtsJ-like methyltransferase At12D13_02630 PF07690 Major Facilitator Superfamily At12D13_02640 PF00753 Metallo-beta-lactamase superfamily At12D13_02650 PF00571 CBS domain At12D13_02650 PF00478 IMP dehydrogenase / GMP reductase domain At12D13_02670 PF00107 Zinc-binding dehydrogenase At12D13_02670 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_02680 PF01738 Dienelactone hydrolase family At12D13_02690 PF00512 His Kinase A (phospho-acceptor) domain At12D13_02690 PF00672 HAMP domain At12D13_02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_02700 PF00072 Response regulator receiver domain At12D13_02700 PF00486 Transcriptional regulatory protein, C terminal At12D13_02720 PF00994 Probable molybdopterin binding domain At12D13_02730 PF08544 GHMP kinases C terminal At12D13_02730 PF00288 GHMP kinases N terminal domain At12D13_02750 PF00348 Polyprenyl synthetase At12D13_02780 PF06965 Na+/H+ antiporter 1 At12D13_02780 PF01343 Peptidase family S49 At12D13_02800 PF02091 Glycyl-tRNA synthetase alpha subunit At12D13_02820 PF04011 LemA family At12D13_02830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) At12D13_02850 PF05746 DALR anticodon binding domain At12D13_02850 PF02092 Glycyl-tRNA synthetase beta subunit At12D13_02860 PF04463 Protein of unknown function (DUF523) At12D13_02870 PF00672 HAMP domain At12D13_02870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_02890 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain At12D13_02890 PF02843 Phosphoribosylglycinamide synthetase, C domain At12D13_02890 PF02844 Phosphoribosylglycinamide synthetase, N domain At12D13_02900 PF16921 Tex protein YqgF-like domain At12D13_02900 PF09371 Tex-like protein N-terminal domain At12D13_02900 PF17674 HHH domain At12D13_02900 PF00575 S1 RNA binding domain At12D13_02930 PF01040 UbiA prenyltransferase family At12D13_02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_02960 PF03466 LysR substrate binding domain At12D13_02980 PF04107 Glutamate-cysteine ligase family 2(GCS2) At12D13_02990 PF04452 RNA methyltransferase At12D13_03000 PF01384 Phosphate transporter family At12D13_03020 PF05116 Sucrose-6F-phosphate phosphohydrolase At12D13_03030 PF13439 Glycosyltransferase Family 4 At12D13_03030 PF00534 Glycosyl transferases group 1 At12D13_03040 PF07729 FCD domain At12D13_03040 PF00392 Bacterial regulatory proteins, gntR family At12D13_03060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_03060 PF03466 LysR substrate binding domain At12D13_03070 PF01565 FAD binding domain At12D13_03070 PF02913 FAD linked oxidases, C-terminal domain At12D13_03080 PF01565 FAD binding domain At12D13_03080 PF02913 FAD linked oxidases, C-terminal domain At12D13_03090 PF02754 Cysteine-rich domain At12D13_03090 PF13183 4Fe-4S dicluster domain At12D13_03110 PF03734 L,D-transpeptidase catalytic domain At12D13_03110 PF17969 L,D-transpeptidase C-terminal domain At12D13_03120 PF13673 Acetyltransferase (GNAT) domain At12D13_03120 PF00958 GMP synthase C terminal domain At12D13_03120 PF00117 Glutamine amidotransferase class-I At12D13_03120 PF13302 Acetyltransferase (GNAT) domain At12D13_03120 PF03352 Methyladenine glycosylase At12D13_03140 PF03601 Conserved hypothetical protein 698 At12D13_03150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_03150 PF03466 LysR substrate binding domain At12D13_03190 PF03129 Anticodon binding domain At12D13_03190 PF13393 Histidyl-tRNA synthetase At12D13_03200 PF13393 Histidyl-tRNA synthetase At12D13_03210 PF01634 ATP phosphoribosyltransferase At12D13_03220 PF07681 DoxX At12D13_03240 PF00118 TCP-1/cpn60 chaperonin family At12D13_03250 PF00166 Chaperonin 10 Kd subunit At12D13_03270 PF06574 FAD synthetase At12D13_03270 PF01687 Riboflavin kinase At12D13_03280 PF00133 tRNA synthetases class I (I, L, M and V) At12D13_03280 PF08264 Anticodon-binding domain of tRNA At12D13_03300 PF14437 MafB19-like deaminase At12D13_03310 PF00849 RNA pseudouridylate synthase At12D13_03310 PF01479 S4 domain At12D13_03330 PF01734 Patatin-like phospholipase At12D13_03340 PF02254 TrkA-N domain At12D13_03340 PF00999 Sodium/hydrogen exchanger family At12D13_03350 PF01523 Putative modulator of DNA gyrase At12D13_03360 PF00459 Inositol monophosphatase family At12D13_03380 PF00534 Glycosyl transferases group 1 At12D13_03380 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) At12D13_03400 PF02606 Tetraacyldisaccharide-1-P 4'-kinase At12D13_03420 PF08676 MutL C terminal dimerisation domain At12D13_03420 PF01119 DNA mismatch repair protein, C-terminal domain At12D13_03430 PF09456 RcsC Alpha-Beta-Loop (ABL) At12D13_03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_03430 PF00072 Response regulator receiver domain At12D13_03430 PF00512 His Kinase A (phospho-acceptor) domain At12D13_03440 PF03707 Bacterial signalling protein N terminal repeat At12D13_03440 PF00563 EAL domain At12D13_03440 PF13188 PAS domain At12D13_03440 PF00990 Diguanylate cyclase, GGDEF domain At12D13_03450 PF08450 SMP-30/Gluconolactonase/LRE-like region At12D13_03460 PF01081 KDPG and KHG aldolase At12D13_03470 PF05035 2-keto-3-deoxy-galactonokinase At12D13_03500 PF03472 Autoinducer binding domain At12D13_03500 PF00196 Bacterial regulatory proteins, luxR family At12D13_03520 PF10609 NUBPL iron-transfer P-loop NTPase At12D13_03530 PF01544 CorA-like Mg2+ transporter protein At12D13_03540 PF02705 K+ potassium transporter At12D13_03560 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter At12D13_03570 PF00119 ATP synthase A chain At12D13_03580 PF00137 ATP synthase subunit C At12D13_03590 PF00430 ATP synthase B/B' CF(0) At12D13_03600 PF00430 ATP synthase B/B' CF(0) At12D13_03620 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_03630 PF01351 Ribonuclease HII At12D13_03660 PF01565 FAD binding domain At12D13_03660 PF02913 FAD linked oxidases, C-terminal domain At12D13_03670 PF03481 Putative GTP-binding controlling metal-binding At12D13_03670 PF01300 Telomere recombination At12D13_03690 PF00355 Rieske [2Fe-2S] domain At12D13_03690 PF00848 Ring hydroxylating alpha subunit (catalytic domain) At12D13_03700 PF00175 Oxidoreductase NAD-binding domain At12D13_03700 PF00970 Oxidoreductase FAD-binding domain At12D13_03700 PF00111 2Fe-2S iron-sulfur cluster binding domain At12D13_03710 PF07886 BA14K-like protein At12D13_03720 PF07886 BA14K-like protein At12D13_03740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_03740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_03740 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_03740 PF12806 Acetyl-CoA dehydrogenase C-terminal like At12D13_03770 PF05958 tRNA (Uracil-5-)-methyltransferase At12D13_03780 PF01479 S4 domain At12D13_03780 PF01728 FtsJ-like methyltransferase At12D13_03790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_03790 PF00672 HAMP domain At12D13_03810 PF01037 Lrp/AsnC ligand binding domain At12D13_03810 PF13404 AsnC-type helix-turn-helix domain At12D13_03870 PF02779 Transketolase, pyrimidine binding domain At12D13_03870 PF13292 1-deoxy-D-xylulose-5-phosphate synthase At12D13_03870 PF02780 Transketolase, C-terminal domain At12D13_03880 PF02678 Pirin At12D13_03880 PF05726 Pirin C-terminal cupin domain At12D13_03890 PF02609 Exonuclease VII small subunit At12D13_03900 PF00850 Histone deacetylase domain At12D13_03910 PF02632 BioY family At12D13_03920 PF02361 Cobalt transport protein At12D13_03930 PF00005 ABC transporter At12D13_03940 PF06224 Winged helix DNA-binding domain At12D13_03960 PF01264 Chorismate synthase At12D13_03980 PF00300 Histidine phosphatase superfamily (branch 1) At12D13_04000 PF00226 DnaJ domain At12D13_04000 PF01556 DnaJ C terminal domain At12D13_04000 PF00684 DnaJ central domain At12D13_04020 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region At12D13_04020 PF01243 Pyridoxamine 5'-phosphate oxidase At12D13_04050 PF13419 Haloacid dehalogenase-like hydrolase At12D13_04070 PF01523 Putative modulator of DNA gyrase At12D13_04090 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At12D13_04090 PF02790 Cytochrome C oxidase subunit II, transmembrane domain At12D13_04100 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_04110 PF01040 UbiA prenyltransferase family At12D13_04130 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 At12D13_04140 PF00510 Cytochrome c oxidase subunit III At12D13_04160 PF02104 SURF1 family At12D13_04170 PF02401 LytB protein At12D13_04180 PF01636 Phosphotransferase enzyme family At12D13_04190 PF00075 RNase H At12D13_04220 PF00462 Glutaredoxin At12D13_04220 PF08534 Redoxin At12D13_04240 PF02622 Uncharacterized ACR, COG1678 At12D13_04260 PF10005 zinc-ribbon domain At12D13_04260 PF15887 Putative zinc-binding metallo-peptidase At12D13_04270 PF13185 GAF domain At12D13_04270 PF00563 EAL domain At12D13_04270 PF00990 Diguanylate cyclase, GGDEF domain At12D13_04280 PF13302 Acetyltransferase (GNAT) domain At12D13_04290 PF05193 Peptidase M16 inactive domain At12D13_04290 PF00675 Insulinase (Peptidase family M16) At12D13_04300 PF14821 Threonine synthase N terminus At12D13_04300 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_04320 PF13419 Haloacid dehalogenase-like hydrolase At12D13_04330 PF07729 FCD domain At12D13_04330 PF00392 Bacterial regulatory proteins, gntR family At12D13_04360 PF18755 Restriction Enzyme Adenine Methylase Associated At12D13_04360 PF01555 DNA methylase At12D13_04370 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH At12D13_04400 PF00730 HhH-GPD superfamily base excision DNA repair protein At12D13_04400 PF14815 NUDIX domain At12D13_04420 PF13462 Thioredoxin At12D13_04430 PF02463 RecF/RecN/SMC N terminal domain At12D13_04450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_04460 PF02896 PEP-utilising enzyme, TIM barrel domain At12D13_04460 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain At12D13_04460 PF00391 PEP-utilising enzyme, mobile domain At12D13_04540 PF06039 Malate:quinone oxidoreductase (Mqo) At12D13_04560 PF00009 Elongation factor Tu GTP binding domain At12D13_04570 PF01507 Phosphoadenosine phosphosulfate reductase family At12D13_04580 PF01507 Phosphoadenosine phosphosulfate reductase family At12D13_04590 PF02082 Transcriptional regulator At12D13_04610 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_04620 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_04630 PF12857 TOBE-like domain At12D13_04630 PF00005 ABC transporter At12D13_04640 PF00698 Acyl transferase domain At12D13_04640 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_04640 PF00107 Zinc-binding dehydrogenase At12D13_04640 PF16197 Ketoacyl-synthetase C-terminal extension At12D13_04640 PF14765 Polyketide synthase dehydratase At12D13_04640 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_04640 PF08659 KR domain At12D13_04640 PF00550 Phosphopantetheine attachment site At12D13_04640 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_04650 PF00563 EAL domain At12D13_04650 PF01590 GAF domain At12D13_04650 PF00990 Diguanylate cyclase, GGDEF domain At12D13_04650 PF00989 PAS fold At12D13_04670 PF00440 Bacterial regulatory proteins, tetR family At12D13_04670 PF13977 BetI-type transcriptional repressor, C-terminal At12D13_04680 PF00171 Aldehyde dehydrogenase family At12D13_04690 PF05199 GMC oxidoreductase At12D13_04690 PF00732 GMC oxidoreductase At12D13_04720 PF00654 Voltage gated chloride channel At12D13_04780 PF07690 Major Facilitator Superfamily At12D13_04800 PF04675 DNA ligase N terminus At12D13_04800 PF04679 ATP dependent DNA ligase C terminal region At12D13_04800 PF01068 ATP dependent DNA ligase domain At12D13_04820 PF04488 Glycosyltransferase sugar-binding region containing DXD motif At12D13_04830 PF00403 Heavy-metal-associated domain At12D13_04840 PF17969 L,D-transpeptidase C-terminal domain At12D13_04840 PF03734 L,D-transpeptidase catalytic domain At12D13_04850 PF03734 L,D-transpeptidase catalytic domain At12D13_04850 PF17969 L,D-transpeptidase C-terminal domain At12D13_04860 PF01047 MarR family At12D13_04870 PF02566 OsmC-like protein At12D13_04900 PF12848 ABC transporter At12D13_04900 PF00005 ABC transporter At12D13_04960 PF03466 LysR substrate binding domain At12D13_04960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_04970 PF00106 short chain dehydrogenase At12D13_05000 PF05872 Bacterial protein of unknown function (DUF853) At12D13_05020 PF01638 HxlR-like helix-turn-helix At12D13_05030 PF00106 short chain dehydrogenase At12D13_05040 PF12833 Helix-turn-helix domain At12D13_05060 PF00248 Aldo/keto reductase family At12D13_05070 PF01062 Bestrophin, RFP-TM, chloride channel At12D13_05080 PF08279 HTH domain At12D13_05080 PF13280 WYL domain At12D13_05110 PF01063 Amino-transferase class IV At12D13_05120 PF00672 HAMP domain At12D13_05120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_05120 PF02203 Tar ligand binding domain homologue At12D13_05130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_05130 PF03466 LysR substrate binding domain At12D13_05160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At12D13_05160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At12D13_05180 PF13280 WYL domain At12D13_05180 PF08279 HTH domain At12D13_05190 PF01810 LysE type translocator At12D13_05200 PF01322 Cytochrome C' At12D13_05210 PF00034 Cytochrome c At12D13_05270 PF00376 MerR family regulatory protein At12D13_05270 PF09278 MerR, DNA binding At12D13_05290 PF02583 Metal-sensitive transcriptional repressor At12D13_05300 PF01545 Cation efflux family At12D13_05320 PF00571 CBS domain At12D13_05320 PF00005 ABC transporter At12D13_05330 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_05350 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain At12D13_05350 PF00326 Prolyl oligopeptidase family At12D13_05370 PF00701 Dihydrodipicolinate synthetase family At12D13_05390 PF12833 Helix-turn-helix domain At12D13_05390 PF02805 Metal binding domain of Ada At12D13_05390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At12D13_05390 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At12D13_05410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_05440 PF03006 Haemolysin-III related At12D13_05460 PF01641 SelR domain At12D13_05480 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter At12D13_05490 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At12D13_05510 PF01899 Na+/H+ ion antiporter subunit At12D13_05520 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) At12D13_05530 PF03334 Na+/H+ antiporter subunit At12D13_05540 PF05443 ROS/MUCR transcriptional regulator protein At12D13_05570 PF02657 Fe-S metabolism associated domain At12D13_05580 PF17264 Family of unknown function (DUF5330) At12D13_05590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_05590 PF00512 His Kinase A (phospho-acceptor) domain At12D13_05680 PF00144 Beta-lactamase At12D13_05710 PF00912 Transglycosylase At12D13_05710 PF00905 Penicillin binding protein transpeptidase domain At12D13_05720 PF03692 Putative zinc- or iron-chelating domain At12D13_05730 PF00905 Penicillin binding protein transpeptidase domain At12D13_05750 PF00403 Heavy-metal-associated domain At12D13_05760 PF09278 MerR, DNA binding At12D13_05760 PF00376 MerR family regulatory protein At12D13_05790 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system At12D13_05830 PF00251 Glycosyl hydrolases family 32 N-terminal domain At12D13_05830 PF08244 Glycosyl hydrolases family 32 C terminal At12D13_05840 PF02696 Uncharacterized ACR, YdiU/UPF0061 family At12D13_05860 PF01037 Lrp/AsnC ligand binding domain At12D13_05860 PF13404 AsnC-type helix-turn-helix domain At12D13_05950 PF04860 Phage portal protein At12D13_06120 PF00486 Transcriptional regulatory protein, C terminal At12D13_06120 PF00072 Response regulator receiver domain At12D13_06130 PF00512 His Kinase A (phospho-acceptor) domain At12D13_06130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_06160 PF03100 CcmE At12D13_06170 PF01578 Cytochrome C assembly protein At12D13_06170 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal At12D13_06180 PF03918 Cytochrome C biogenesis protein At12D13_06190 PF13180 PDZ domain At12D13_06200 PF00072 Response regulator receiver domain At12D13_06200 PF00486 Transcriptional regulatory protein, C terminal At12D13_06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_06210 PF00672 HAMP domain At12D13_06210 PF00512 His Kinase A (phospho-acceptor) domain At12D13_06220 PF06629 MltA-interacting protein MipA At12D13_06230 PF03710 Glutamate-ammonia ligase adenylyltransferase At12D13_06230 PF08335 GlnD PII-uridylyltransferase At12D13_06240 PF00989 PAS fold At12D13_06240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_06240 PF00512 His Kinase A (phospho-acceptor) domain At12D13_06260 PF11940 Domain of unknown function (DUF3458) Ig-like fold At12D13_06260 PF17432 Domain of unknown function (DUF3458_C) ARM repeats At12D13_06260 PF01433 Peptidase family M1 domain At12D13_06270 PF00892 EamA-like transporter family At12D13_06300 PF00012 Hsp70 protein At12D13_06310 PF03707 Bacterial signalling protein N terminal repeat At12D13_06310 PF00563 EAL domain At12D13_06310 PF00990 Diguanylate cyclase, GGDEF domain At12D13_06350 PF00440 Bacterial regulatory proteins, tetR family At12D13_06350 PF16925 Tetracyclin repressor-like, C-terminal domain At12D13_06380 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_06380 PF00107 Zinc-binding dehydrogenase At12D13_06390 PF01638 HxlR-like helix-turn-helix At12D13_06400 PF02673 Bacitracin resistance protein BacA At12D13_06410 PF00571 CBS domain At12D13_06410 PF01769 Divalent cation transporter At12D13_06410 PF03448 MgtE intracellular N domain At12D13_06420 PF07690 Major Facilitator Superfamily At12D13_06430 PF00781 Diacylglycerol kinase catalytic domain At12D13_06440 PF00202 Aminotransferase class-III At12D13_06470 PF09957 Bacterial antitoxin of type II TA system, VapB At12D13_06480 PF01048 Phosphorylase superfamily At12D13_06480 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus At12D13_06540 PF00155 Aminotransferase class I and II At12D13_06560 PF14759 Reductase C-terminal At12D13_06560 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_06570 PF03328 HpcH/HpaI aldolase/citrate lyase family At12D13_06610 PF02530 Porin subfamily At12D13_06620 PF02530 Porin subfamily At12D13_06630 PF14718 Soluble lytic murein transglycosylase L domain At12D13_06630 PF01464 Transglycosylase SLT domain At12D13_06640 PF00701 Dihydrodipicolinate synthetase family At12D13_06650 PF01668 SmpB protein At12D13_06660 PF00672 HAMP domain At12D13_06660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_06680 PF01192 RNA polymerase Rpb6 At12D13_06690 PF04607 Region found in RelA / SpoT proteins At12D13_06690 PF13291 ACT domain At12D13_06690 PF02824 TGS domain At12D13_06720 PF01648 4'-phosphopantetheinyl transferase superfamily At12D13_06730 PF10502 Signal peptidase, peptidase S26 At12D13_06740 PF00035 Double-stranded RNA binding motif At12D13_06740 PF14622 Ribonuclease-III-like At12D13_06750 PF07650 KH domain At12D13_06750 PF01926 50S ribosome-binding GTPase At12D13_06760 PF00027 Cyclic nucleotide-binding domain At12D13_06760 PF13545 Crp-like helix-turn-helix domain At12D13_06770 PF00072 Response regulator receiver domain At12D13_06780 PF02565 Recombination protein O C terminal At12D13_06780 PF11967 Recombination protein O N terminal At12D13_06790 PF07690 Major Facilitator Superfamily At12D13_06800 PF08241 Methyltransferase domain At12D13_06820 PF01966 HD domain At12D13_06840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_06860 PF00005 ABC transporter At12D13_06870 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_06880 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment At12D13_06890 PF05552 Conserved TM helix At12D13_06890 PF00924 Mechanosensitive ion channel At12D13_06910 PF01966 HD domain At12D13_06920 PF01571 Aminomethyltransferase folate-binding domain At12D13_06960 PF00293 NUDIX domain At12D13_06970 PF02694 Uncharacterised BCR, YnfA/UPF0060 family At12D13_06990 PF00990 Diguanylate cyclase, GGDEF domain At12D13_06990 PF00072 Response regulator receiver domain At12D13_07010 PF01066 CDP-alcohol phosphatidyltransferase At12D13_07020 PF02666 Phosphatidylserine decarboxylase At12D13_07030 PF00005 ABC transporter At12D13_07030 PF00664 ABC transporter transmembrane region At12D13_07040 PF01476 LysM domain At12D13_07050 PF03641 Possible lysine decarboxylase At12D13_07060 PF03717 Penicillin-binding Protein dimerisation domain At12D13_07060 PF00905 Penicillin binding protein transpeptidase domain At12D13_07070 PF00892 EamA-like transporter family At12D13_07080 PF00561 alpha/beta hydrolase fold At12D13_07110 PF04480 Protein of unknown function (DUF559) At12D13_07120 PF01406 tRNA synthetases class I (C) catalytic domain At12D13_07120 PF09190 DALR domain At12D13_07130 PF00106 short chain dehydrogenase At12D13_07140 PF00156 Phosphoribosyl transferase domain At12D13_07140 PF13537 Glutamine amidotransferase domain At12D13_07150 PF02674 Colicin V production protein At12D13_07160 PF18073 Rubredoxin metal binding domain At12D13_07160 PF06745 KaiC At12D13_07190 PF01168 Alanine racemase, N-terminal domain At12D13_07190 PF00842 Alanine racemase, C-terminal domain At12D13_07200 PF12852 Cupin At12D13_07200 PF12833 Helix-turn-helix domain At12D13_07210 PF03591 AzlC protein At12D13_07230 PF00005 ABC transporter At12D13_07230 PF00664 ABC transporter transmembrane region At12D13_07240 PF00772 DnaB-like helicase N terminal domain At12D13_07240 PF03796 DnaB-like helicase C terminal domain At12D13_07250 PF01047 MarR family At12D13_07270 PF13533 Biotin-lipoyl like At12D13_07280 PF01281 Ribosomal protein L9, N-terminal domain At12D13_07280 PF03948 Ribosomal protein L9, C-terminal domain At12D13_07300 PF01084 Ribosomal protein S18 At12D13_07310 PF01250 Ribosomal protein S6 At12D13_07320 PF00248 Aldo/keto reductase family At12D13_07330 PF00698 Acyl transferase domain At12D13_07350 PF00550 Phosphopantetheine attachment site At12D13_07360 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_07360 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_07370 PF02618 YceG-like family At12D13_07380 PF08340 Domain of unknown function (DUF1732) At12D13_07380 PF03755 YicC-like family, N-terminal region At12D13_07390 PF00625 Guanylate kinase At12D13_07410 PF00398 Ribosomal RNA adenine dimethylase At12D13_07420 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At12D13_07440 PF03968 OstA-like protein At12D13_07440 PF04453 LPS transport system D At12D13_07470 PF02789 Cytosol aminopeptidase family, N-terminal domain At12D13_07470 PF00883 Cytosol aminopeptidase family, catalytic domain At12D13_07490 PF03707 Bacterial signalling protein N terminal repeat At12D13_07490 PF00563 EAL domain At12D13_07490 PF00990 Diguanylate cyclase, GGDEF domain At12D13_07500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_07510 PF00990 Diguanylate cyclase, GGDEF domain At12D13_07510 PF03707 Bacterial signalling protein N terminal repeat At12D13_07510 PF00563 EAL domain At12D13_07520 PF00989 PAS fold At12D13_07520 PF00512 His Kinase A (phospho-acceptor) domain At12D13_07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_07530 PF00196 Bacterial regulatory proteins, luxR family At12D13_07530 PF00072 Response regulator receiver domain At12D13_07550 PF12848 ABC transporter At12D13_07550 PF00005 ABC transporter At12D13_07560 PF00990 Diguanylate cyclase, GGDEF domain At12D13_07560 PF17158 Membrane-associated sensor, integral membrane domain At12D13_07570 PF13417 Glutathione S-transferase, N-terminal domain At12D13_07580 PF00334 Nucleoside diphosphate kinase At12D13_07620 PF02391 MoaE protein At12D13_07630 PF02597 ThiS family At12D13_07640 PF01066 CDP-alcohol phosphatidyltransferase At12D13_07650 PF02151 UvrB/uvrC motif At12D13_07650 PF08459 UvrC Helix-hairpin-helix N-terminal At12D13_07650 PF01541 GIY-YIG catalytic domain At12D13_07670 PF13505 Outer membrane protein beta-barrel domain At12D13_07680 PF00043 Glutathione S-transferase, C-terminal domain At12D13_07680 PF13417 Glutathione S-transferase, N-terminal domain At12D13_07690 PF00445 Ribonuclease T2 family At12D13_07710 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ At12D13_07720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At12D13_07720 PF01568 Molydopterin dinucleotide binding domain At12D13_07720 PF00384 Molybdopterin oxidoreductase At12D13_07730 PF00293 NUDIX domain At12D13_07750 PF00551 Formyl transferase At12D13_07760 PF02769 AIR synthase related protein, C-terminal domain At12D13_07760 PF00586 AIR synthase related protein, N-terminal domain At12D13_07770 PF01594 AI-2E family transporter At12D13_07790 PF13089 Polyphosphate kinase N-terminal domain At12D13_07790 PF17941 Polyphosphate kinase C-terminal domain 1 At12D13_07790 PF13090 Polyphosphate kinase C-terminal domain 2 At12D13_07790 PF02503 Polyphosphate kinase middle domain At12D13_07800 PF02541 Ppx/GppA phosphatase family At12D13_07810 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_07850 PF00211 Adenylate and Guanylate cyclase catalytic domain At12D13_07870 PF00570 HRDC domain At12D13_07870 PF01612 3'-5' exonuclease At12D13_07880 PF07690 Major Facilitator Superfamily At12D13_07890 PF02938 GAD domain At12D13_07890 PF00152 tRNA synthetases class II (D, K and N) At12D13_07890 PF01336 OB-fold nucleic acid binding domain At12D13_07910 PF06123 Inner membrane protein CreD At12D13_07920 PF01740 STAS domain At12D13_07920 PF00916 Sulfate permease family At12D13_07940 PF00521 DNA gyrase/topoisomerase IV, subunit A At12D13_07940 PF03989 DNA gyrase C-terminal domain, beta-propeller At12D13_07950 PF04376 Arginine-tRNA-protein transferase, N terminus At12D13_07950 PF04377 Arginine-tRNA-protein transferase, C terminus At12D13_07970 PF00490 Delta-aminolevulinic acid dehydratase At12D13_08010 PF00464 Serine hydroxymethyltransferase At12D13_08020 PF03477 ATP cone domain At12D13_08030 PF01872 RibD C-terminal domain At12D13_08030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region At12D13_08040 PF00677 Lumazine binding domain At12D13_08050 PF01810 LysE type translocator At12D13_08060 PF00885 6,7-dimethyl-8-ribityllumazine synthase At12D13_08070 PF01029 NusB family At12D13_08080 PF07690 Major Facilitator Superfamily At12D13_08090 PF03030 Inorganic H+ pyrophosphatase At12D13_08130 PF02504 Fatty acid synthesis protein At12D13_08140 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III At12D13_08140 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal At12D13_08150 PF00216 Bacterial DNA-binding protein At12D13_08160 PF13411 MerR HTH family regulatory protein At12D13_08180 PF00403 Heavy-metal-associated domain At12D13_08190 PF00175 Oxidoreductase NAD-binding domain At12D13_08190 PF00111 2Fe-2S iron-sulfur cluster binding domain At12D13_08190 PF00970 Oxidoreductase FAD-binding domain At12D13_08200 PF00376 MerR family regulatory protein At12D13_08200 PF09278 MerR, DNA binding At12D13_08210 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_08220 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_08220 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_08230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_08230 PF00005 ABC transporter At12D13_08240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_08240 PF00005 ABC transporter At12D13_08250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_08270 PF02386 Cation transport protein At12D13_08280 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_08280 PF00585 C-terminal regulatory domain of Threonine dehydratase At12D13_08300 PF00072 Response regulator receiver domain At12D13_08300 PF00990 Diguanylate cyclase, GGDEF domain At12D13_08310 PF02525 Flavodoxin-like fold At12D13_08320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_08320 PF03466 LysR substrate binding domain At12D13_08330 PF00149 Calcineurin-like phosphoesterase At12D13_08330 PF02872 5'-nucleotidase, C-terminal domain At12D13_08380 PF00581 Rhodanese-like domain At12D13_08390 PF02272 DHHA1 domain At12D13_08390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At12D13_08390 PF01411 tRNA synthetases class II (A) At12D13_08400 PF00571 CBS domain At12D13_08400 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_08410 PF03441 FAD binding domain of DNA photolyase At12D13_08410 PF00875 DNA photolyase At12D13_08430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At12D13_08430 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At12D13_08540 PF00239 Resolvase, N terminal domain At12D13_08540 PF02796 Helix-turn-helix domain of resolvase At12D13_08630 PF06055 Exopolysaccharide synthesis, ExoD At12D13_08730 PF02397 Bacterial sugar transferase At12D13_08740 PF00534 Glycosyl transferases group 1 At12D13_08790 PF02628 Cytochrome oxidase assembly protein At12D13_08800 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase At12D13_08810 PF01118 Semialdehyde dehydrogenase, NAD binding domain At12D13_08820 PF00491 Arginase family At12D13_08830 PF00380 Ribosomal protein S9/S16 At12D13_08840 PF00572 Ribosomal protein L13 At12D13_08860 PF13380 CoA binding domain At12D13_08870 PF01053 Cys/Met metabolism PLP-dependent enzyme At12D13_08920 PF00067 Cytochrome P450 At12D13_08930 PF00990 Diguanylate cyclase, GGDEF domain At12D13_08940 PF00574 Clp protease At12D13_08950 PF10431 C-terminal, D2-small domain, of ClpB protein At12D13_08950 PF06689 ClpX C4-type zinc finger At12D13_08950 PF07724 AAA domain (Cdc48 subfamily) At12D13_08960 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_08960 PF05362 Lon protease (S16) C-terminal proteolytic domain At12D13_08960 PF02190 ATP-dependent protease La (LON) substrate-binding domain At12D13_08970 PF00216 Bacterial DNA-binding protein At12D13_08980 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At12D13_09000 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 At12D13_09010 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit At12D13_09020 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit At12D13_09040 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit At12D13_09070 PF10531 SLBB domain At12D13_09070 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region At12D13_09070 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit At12D13_09080 PF00384 Molybdopterin oxidoreductase At12D13_09080 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region At12D13_09080 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal At12D13_09090 PF00146 NADH dehydrogenase At12D13_09100 PF12838 4Fe-4S dicluster domain At12D13_09110 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 At12D13_09120 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At12D13_09130 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus At12D13_09130 PF00361 Proton-conducting membrane transporter At12D13_09140 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus At12D13_09140 PF00361 Proton-conducting membrane transporter At12D13_09150 PF00361 Proton-conducting membrane transporter At12D13_09160 PF02237 Biotin protein ligase C terminal domain At12D13_09160 PF03099 Biotin/lipoate A/B protein ligase family At12D13_09160 PF08279 HTH domain At12D13_09170 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain At12D13_09170 PF12706 Beta-lactamase superfamily domain At12D13_09170 PF17770 Ribonuclease J C-terminal domain At12D13_09190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At12D13_09190 PF03129 Anticodon binding domain At12D13_09200 PF12704 MacB-like periplasmic core domain At12D13_09200 PF02687 FtsX-like permease family At12D13_09210 PF00005 ABC transporter At12D13_09220 PF02811 PHP domain At12D13_09220 PF07733 Bacterial DNA polymerase III alpha NTPase domain At12D13_09220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At12D13_09220 PF14579 Helix-hairpin-helix motif At12D13_09240 PF00817 impB/mucB/samB family At12D13_09240 PF11799 impB/mucB/samB family C-terminal domain At12D13_09260 PF00072 Response regulator receiver domain At12D13_09270 PF00072 Response regulator receiver domain At12D13_09270 PF00990 Diguanylate cyclase, GGDEF domain At12D13_09280 PF00471 Ribosomal protein L33 At12D13_09290 PF07690 Major Facilitator Superfamily At12D13_09320 PF00575 S1 RNA binding domain At12D13_09320 PF00773 RNB domain At12D13_09320 PF08206 Ribonuclease B OB domain At12D13_09320 PF17876 Cold shock domain At12D13_09320 PF08461 Ribonuclease R winged-helix domain At12D13_09330 PF13368 Topoisomerase C-terminal repeat At12D13_09330 PF01396 Topoisomerase DNA binding C4 zinc finger At12D13_09330 PF01131 DNA topoisomerase At12D13_09330 PF01751 Toprim domain At12D13_09350 PF02481 DNA recombination-mediator protein A At12D13_09350 PF17782 DprA winged helix domain At12D13_09360 PF02660 Glycerol-3-phosphate acyltransferase At12D13_09370 PF01979 Amidohydrolase family At12D13_09380 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain At12D13_09380 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain At12D13_09400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_09400 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_09400 PF18158 Adaptive response protein AidB N-terminal domain At12D13_09410 PF00583 Acetyltransferase (GNAT) family At12D13_09470 PF03652 Holliday junction resolvase At12D13_09480 PF03831 PhnA domain At12D13_09480 PF08274 PhnA Zinc-Ribbon At12D13_09500 PF02686 Glu-tRNAGln amidotransferase C subunit At12D13_09510 PF01425 Amidase At12D13_09520 PF13673 Acetyltransferase (GNAT) domain At12D13_09520 PF00583 Acetyltransferase (GNAT) family At12D13_09530 PF09857 Putative toxin of bacterial toxin-antitoxin pair At12D13_09560 PF02934 GatB/GatE catalytic domain At12D13_09560 PF02637 GatB domain At12D13_09580 PF00583 Acetyltransferase (GNAT) family At12D13_09610 PF03588 Leucyl/phenylalanyl-tRNA protein transferase At12D13_09620 PF00289 Biotin carboxylase, N-terminal domain At12D13_09620 PF02785 Biotin carboxylase C-terminal domain At12D13_09620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_09630 PF00364 Biotin-requiring enzyme At12D13_09640 PF01220 Dehydroquinase class II At12D13_09650 PF06965 Na+/H+ antiporter 1 At12D13_09650 PF13462 Thioredoxin At12D13_09660 PF00155 Aminotransferase class I and II At12D13_09710 PF10150 Ribonuclease E/G family At12D13_09710 PF00575 S1 RNA binding domain At12D13_09710 PF12111 Polyribonucleotide phosphorylase C terminal At12D13_09720 PF01520 N-acetylmuramoyl-L-alanine amidase At12D13_09730 PF00905 Penicillin binding protein transpeptidase domain At12D13_09730 PF17092 Penicillin-binding protein OB-like domain At12D13_09730 PF00912 Transglycosylase At12D13_09740 PF00472 RF-1 domain At12D13_09740 PF03462 PCRF domain At12D13_09770 PF01513 ATP-NAD kinase At12D13_09780 PF02567 Phenazine biosynthesis-like protein At12D13_09810 PF00111 2Fe-2S iron-sulfur cluster binding domain At12D13_09830 PF00809 Pterin binding enzyme At12D13_09840 PF02152 Dihydroneopterin aldolase At12D13_09850 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) At12D13_09870 PF05128 Domain of unknown function (DUF697) At12D13_09880 PF04317 YcjX-like family, DUF463 At12D13_09900 PF01258 Prokaryotic dksA/traR C4-type zinc finger At12D13_09930 PF13188 PAS domain At12D13_09930 PF08448 PAS fold At12D13_09930 PF00512 His Kinase A (phospho-acceptor) domain At12D13_09930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_09930 PF00072 Response regulator receiver domain At12D13_09940 PF02617 ATP-dependent Clp protease adaptor protein ClpS At12D13_09950 PF02861 Clp amino terminal domain, pathogenicity island component At12D13_09950 PF10431 C-terminal, D2-small domain, of ClpB protein At12D13_09950 PF17871 AAA lid domain At12D13_09950 PF07724 AAA domain (Cdc48 subfamily) At12D13_09950 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_09980 PF03466 LysR substrate binding domain At12D13_09980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_10000 PF01230 HIT domain At12D13_10050 PF00318 Ribosomal protein S2 At12D13_10060 PF00889 Elongation factor TS At12D13_10070 PF00696 Amino acid kinase family At12D13_10080 PF01765 Ribosome recycling factor At12D13_10090 PF01255 Putative undecaprenyl diphosphate synthase At12D13_10110 PF02163 Peptidase family M50 At12D13_10110 PF17820 PDZ domain At12D13_10120 PF01103 Surface antigen At12D13_10120 PF07244 Surface antigen variable number repeat At12D13_10130 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD At12D13_10130 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_10140 PF07977 FabA-like domain At12D13_10150 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 At12D13_10150 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_10160 PF06230 LpxI C-terminal domain At12D13_10160 PF17930 LpxI N-terminal domain At12D13_10170 PF02684 Lipid-A-disaccharide synthetase At12D13_10180 PF07729 FCD domain At12D13_10180 PF00392 Bacterial regulatory proteins, gntR family At12D13_10190 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_10200 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_10210 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_10220 PF00005 ABC transporter At12D13_10230 PF00285 Citrate synthase, C-terminal domain At12D13_10260 PF01726 LexA DNA binding domain At12D13_10260 PF00717 Peptidase S24-like At12D13_10270 PF00005 ABC transporter At12D13_10280 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_10290 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_10300 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_10310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_10310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_10320 PF17912 MalK OB fold domain At12D13_10320 PF00005 ABC transporter At12D13_10330 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_10340 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_10350 PF01547 Bacterial extracellular solute-binding protein At12D13_10370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_10370 PF13378 Enolase C-terminal domain-like At12D13_10390 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_10390 PF00107 Zinc-binding dehydrogenase At12D13_10400 PF04115 Ureidoglycolate lyase At12D13_10410 PF00005 ABC transporter At12D13_10420 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_10420 PF00005 ABC transporter At12D13_10440 PF13458 Periplasmic binding protein At12D13_10450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_10450 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_10450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_10450 PF12806 Acetyl-CoA dehydrogenase C-terminal like At12D13_10460 PF00106 short chain dehydrogenase At12D13_10470 PF00501 AMP-binding enzyme At12D13_10470 PF00550 Phosphopantetheine attachment site At12D13_10470 PF07993 Male sterility protein At12D13_10480 PF00378 Enoyl-CoA hydratase/isomerase At12D13_10500 PF07729 FCD domain At12D13_10500 PF00392 Bacterial regulatory proteins, gntR family At12D13_10510 PF01571 Aminomethyltransferase folate-binding domain At12D13_10550 PF00793 DAHP synthetase I family At12D13_10560 PF00113 Enolase, C-terminal TIM barrel domain At12D13_10560 PF03952 Enolase, N-terminal domain At12D13_10580 PF00676 Dehydrogenase E1 component At12D13_10590 PF00364 Biotin-requiring enzyme At12D13_10590 PF02779 Transketolase, pyrimidine binding domain At12D13_10590 PF02780 Transketolase, C-terminal domain At12D13_10610 PF00364 Biotin-requiring enzyme At12D13_10610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At12D13_10610 PF02817 e3 binding domain At12D13_10630 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_10630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At12D13_10650 PF04055 Radical SAM superfamily At12D13_10650 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family At12D13_10660 PF00892 EamA-like transporter family At12D13_10700 PF03364 Polyketide cyclase / dehydrase and lipid transport At12D13_10710 PF02464 Competence-damaged protein At12D13_10720 PF02542 YgbB family At12D13_10720 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase At12D13_10730 PF01207 Dihydrouridine synthase (Dus) At12D13_10740 PF00512 His Kinase A (phospho-acceptor) domain At12D13_10740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_10740 PF00989 PAS fold At12D13_10750 PF02954 Bacterial regulatory protein, Fis family At12D13_10750 PF00072 Response regulator receiver domain At12D13_10750 PF00158 Sigma-54 interaction domain At12D13_10760 PF00672 HAMP domain At12D13_10760 PF00512 His Kinase A (phospho-acceptor) domain At12D13_10760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_10760 PF00989 PAS fold At12D13_10770 PF00158 Sigma-54 interaction domain At12D13_10770 PF02954 Bacterial regulatory protein, Fis family At12D13_10770 PF00072 Response regulator receiver domain At12D13_10780 PF02080 TrkA-C domain At12D13_10780 PF02254 TrkA-N domain At12D13_10790 PF17209 Hfq protein At12D13_10800 PF16360 GTP-binding GTPase Middle Region At12D13_10800 PF13167 GTP-binding GTPase N-terminal At12D13_10800 PF01926 50S ribosome-binding GTPase At12D13_10810 PF03819 MazG nucleotide pyrophosphohydrolase domain At12D13_10830 PF10414 Sirohaem synthase dimerisation region At12D13_10830 PF14824 Sirohaem biosynthesis protein central At12D13_10830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_10860 PF01795 MraW methylase family At12D13_10870 PF00970 Oxidoreductase FAD-binding domain At12D13_10870 PF00175 Oxidoreductase NAD-binding domain At12D13_10880 PF07690 Major Facilitator Superfamily At12D13_10910 PF02347 Glycine cleavage system P-protein At12D13_10920 PF01597 Glycine cleavage H-protein At12D13_10930 PF08669 Glycine cleavage T-protein C-terminal barrel domain At12D13_10930 PF01571 Aminomethyltransferase folate-binding domain At12D13_10980 PF02537 CrcB-like protein, Camphor Resistance (CrcB) At12D13_10990 PF01479 S4 domain At12D13_10990 PF00849 RNA pseudouridylate synthase At12D13_11000 PF13419 Haloacid dehalogenase-like hydrolase At12D13_11030 PF01042 Endoribonuclease L-PSP At12D13_11040 PF00756 Putative esterase At12D13_11060 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 At12D13_11080 PF00578 AhpC/TSA family At12D13_11080 PF10417 C-terminal domain of 1-Cys peroxiredoxin At12D13_11130 PF04542 Sigma-70 region 2 At12D13_11130 PF08281 Sigma-70, region 4 At12D13_11170 PF03358 NADPH-dependent FMN reductase At12D13_11180 PF01758 Sodium Bile acid symporter family At12D13_11210 PF00654 Voltage gated chloride channel At12D13_11220 PF12706 Beta-lactamase superfamily domain At12D13_11220 PF03099 Biotin/lipoate A/B protein ligase family At12D13_11230 PF01026 TatD related DNase At12D13_11240 PF09334 tRNA synthetases class I (M) At12D13_11240 PF08264 Anticodon-binding domain of tRNA At12D13_11250 PF09115 DNA polymerase III, delta subunit, C terminal At12D13_11260 PF02223 Thymidylate kinase At12D13_11270 PF00768 D-alanyl-D-alanine carboxypeptidase At12D13_11270 PF07943 Penicillin-binding protein 5, C-terminal domain At12D13_11280 PF05036 Sporulation related domain At12D13_11280 PF03330 Lytic transglycolase At12D13_11360 PF00521 DNA gyrase/topoisomerase IV, subunit A At12D13_11360 PF03989 DNA gyrase C-terminal domain, beta-propeller At12D13_11370 PF01914 MarC family integral membrane protein At12D13_11380 PF00571 CBS domain At12D13_11380 PF00478 IMP dehydrogenase / GMP reductase domain At12D13_11400 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH At12D13_11410 PF00436 Single-strand binding protein family At12D13_11420 PF17760 UvrA interaction domain At12D13_11420 PF17755 UvrA DNA-binding domain At12D13_11440 PF01207 Dihydrouridine synthase (Dus) At12D13_11450 PF01557 Fumarylacetoacetate (FAA) hydrolase family At12D13_11460 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_11480 PF00950 ABC 3 transport family At12D13_11490 PF00005 ABC transporter At12D13_11500 PF01297 Zinc-uptake complex component A periplasmic At12D13_11510 PF00356 Bacterial regulatory proteins, lacI family At12D13_11530 PF00248 Aldo/keto reductase family At12D13_11550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At12D13_11550 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain At12D13_11560 PF03597 Cytochrome oxidase maturation protein cbb3-type At12D13_11580 PF05751 FixH At12D13_11590 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase At12D13_11590 PF12801 4Fe-4S binding domain At12D13_11590 PF13746 4Fe-4S dicluster domain At12D13_11630 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP At12D13_11630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III At12D13_11660 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_11670 PF01740 STAS domain At12D13_11670 PF00916 Sulfate permease family At12D13_11690 PF00924 Mechanosensitive ion channel At12D13_11700 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase At12D13_11730 PF09278 MerR, DNA binding At12D13_11730 PF00376 MerR family regulatory protein At12D13_11740 PF03448 MgtE intracellular N domain At12D13_11740 PF01769 Divalent cation transporter At12D13_11740 PF00571 CBS domain At12D13_11750 PF00384 Molybdopterin oxidoreductase At12D13_11770 PF01327 Polypeptide deformylase At12D13_11820 PF03099 Biotin/lipoate A/B protein ligase family At12D13_11830 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_11830 PF00107 Zinc-binding dehydrogenase At12D13_11880 PF07549 SecD/SecF GG Motif At12D13_11880 PF02355 Protein export membrane protein At12D13_11890 PF02699 Preprotein translocase subunit At12D13_11920 PF01262 Alanine dehydrogenase/PNT, C-terminal domain At12D13_11920 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_11930 PF00440 Bacterial regulatory proteins, tetR family At12D13_11940 PF00067 Cytochrome P450 At12D13_11960 PF06426 Serine acetyltransferase, N-terminal At12D13_11960 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_11970 PF00561 alpha/beta hydrolase fold At12D13_11990 PF01494 FAD binding domain At12D13_12000 PF01053 Cys/Met metabolism PLP-dependent enzyme At12D13_12010 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_12020 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_12030 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_12040 PF00005 ABC transporter At12D13_12050 PF02272 DHHA1 domain At12D13_12050 PF17768 RecJ OB domain At12D13_12050 PF01368 DHH family At12D13_12070 PF03447 Homoserine dehydrogenase, NAD binding domain At12D13_12070 PF01842 ACT domain At12D13_12070 PF00742 Homoserine dehydrogenase At12D13_12080 PF00155 Aminotransferase class I and II At12D13_12090 PF01156 Inosine-uridine preferring nucleoside hydrolase At12D13_12100 PF01925 Sulfite exporter TauE/SafE At12D13_12130 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_12130 PF00107 Zinc-binding dehydrogenase At12D13_12140 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_12140 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_12160 PF07977 FabA-like domain At12D13_12170 PF00550 Phosphopantetheine attachment site At12D13_12180 PF04055 Radical SAM superfamily At12D13_12190 PF13545 Crp-like helix-turn-helix domain At12D13_12190 PF00027 Cyclic nucleotide-binding domain At12D13_12210 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus At12D13_12220 PF17746 SfsA N-terminal OB domain At12D13_12220 PF03749 Sugar fermentation stimulation protein RE domain At12D13_12230 PF00557 Metallopeptidase family M24 At12D13_12240 PF04002 RadC-like JAB domain At12D13_12270 PF01474 Class-II DAHP synthetase family At12D13_12280 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_12280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At12D13_12300 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) At12D13_12310 PF13419 Haloacid dehalogenase-like hydrolase At12D13_12330 PF10415 Fumarase C C-terminus At12D13_12330 PF00206 Lyase At12D13_12340 PF07859 alpha/beta hydrolase fold At12D13_12340 PF13472 GDSL-like Lipase/Acylhydrolase family At12D13_12350 PF06418 CTP synthase N-terminus At12D13_12350 PF00117 Glutamine amidotransferase class-I At12D13_12360 PF03840 Preprotein translocase SecG subunit At12D13_12370 PF00121 Triosephosphate isomerase At12D13_12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_12390 PF01751 Toprim domain At12D13_12390 PF00204 DNA gyrase B At12D13_12390 PF00986 DNA gyrase B subunit, carboxyl terminus At12D13_12400 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_12410 PF16859 Tetracyclin repressor-like, C-terminal domain At12D13_12410 PF00440 Bacterial regulatory proteins, tetR family At12D13_12420 PF01209 ubiE/COQ5 methyltransferase family At12D13_12430 PF01370 NAD dependent epimerase/dehydratase family At12D13_12440 PF00574 Clp protease At12D13_12460 PF01022 Bacterial regulatory protein, arsR family At12D13_12470 PF13091 PLD-like domain At12D13_12490 PF08669 Glycine cleavage T-protein C-terminal barrel domain At12D13_12490 PF01571 Aminomethyltransferase folate-binding domain At12D13_12490 PF16350 FAD dependent oxidoreductase central domain At12D13_12490 PF01266 FAD dependent oxidoreductase At12D13_12500 PF12794 Mechanosensitive ion channel inner membrane domain 1 At12D13_12500 PF12795 Mechanosensitive ion channel porin domain At12D13_12500 PF00924 Mechanosensitive ion channel At12D13_12620 PF00005 ABC transporter At12D13_12630 PF02405 Permease MlaE At12D13_12640 PF13378 Enolase C-terminal domain-like At12D13_12640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_12670 PF00390 Malic enzyme, N-terminal domain At12D13_12670 PF03949 Malic enzyme, NAD binding domain At12D13_12670 PF01515 Phosphate acetyl/butaryl transferase At12D13_12690 PF00881 Nitroreductase family At12D13_12700 PF07676 WD40-like Beta Propeller Repeat At12D13_12710 PF00795 Carbon-nitrogen hydrolase At12D13_12710 PF02540 NAD synthase At12D13_12720 PF00884 Sulfatase At12D13_12740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At12D13_12740 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_12770 PF05697 Bacterial trigger factor protein (TF) At12D13_12770 PF05698 Bacterial trigger factor protein (TF) C-terminus At12D13_12770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase At12D13_12800 PF01134 Glucose inhibited division protein A At12D13_12810 PF00107 Zinc-binding dehydrogenase At12D13_12810 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_12830 PF00550 Phosphopantetheine attachment site At12D13_12840 PF13193 AMP-binding enzyme C-terminal domain At12D13_12840 PF00501 AMP-binding enzyme At12D13_12850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At12D13_12850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At12D13_12860 PF04715 Anthranilate synthase component I, N terminal region At12D13_12860 PF00425 chorismate binding enzyme At12D13_12870 PF01702 Queuine tRNA-ribosyltransferase At12D13_12880 PF02547 Queuosine biosynthesis protein At12D13_12890 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD At12D13_12900 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD At12D13_12910 PF01467 Cytidylyltransferase-like At12D13_12950 PF00591 Glycosyl transferase family, a/b domain At12D13_12950 PF02885 Glycosyl transferase family, helical bundle domain At12D13_12960 PF00218 Indole-3-glycerol phosphate synthase At12D13_12970 PF01967 MoaC family At12D13_12980 PF00994 Probable molybdopterin binding domain At12D13_12980 PF03453 MoeA N-terminal region (domain I and II) At12D13_12980 PF03454 MoeA C-terminal region (domain IV) At12D13_12990 PF00990 Diguanylate cyclase, GGDEF domain At12D13_12990 PF17158 Membrane-associated sensor, integral membrane domain At12D13_13010 PF02254 TrkA-N domain At12D13_13010 PF00999 Sodium/hydrogen exchanger family At12D13_13030 PF06463 Molybdenum Cofactor Synthesis C At12D13_13030 PF04055 Radical SAM superfamily At12D13_13040 PF00892 EamA-like transporter family At12D13_13050 PF07690 Major Facilitator Superfamily At12D13_13060 PF12804 MobA-like NTP transferase domain At12D13_13070 PF03205 Molybdopterin guanine dinucleotide synthesis protein B At12D13_13080 PF01551 Peptidase family M23 At12D13_13100 PF01975 Survival protein SurE At12D13_13110 PF02403 Seryl-tRNA synthetase N-terminal domain At12D13_13110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At12D13_13120 PF00902 Sec-independent protein translocase protein (TatC) At12D13_13130 PF02416 mttA/Hcf106 family At12D13_13140 PF02416 mttA/Hcf106 family At12D13_13150 PF04079 Segregation and condensation complex subunit ScpB At12D13_13160 PF02616 Segregation and condensation protein ScpA At12D13_13170 PF00933 Glycosyl hydrolase family 3 N terminal domain At12D13_13190 PF03485 Arginyl tRNA synthetase N terminal domain At12D13_13190 PF00750 tRNA synthetases class I (R) At12D13_13190 PF05746 DALR anticodon binding domain At12D13_13200 PF13286 Phosphohydrolase-associated domain At12D13_13200 PF01966 HD domain At12D13_13210 PF01521 Iron-sulphur cluster biosynthesis At12D13_13230 PF08238 Sel1 repeat At12D13_13250 PF00133 tRNA synthetases class I (I, L, M and V) At12D13_13250 PF08264 Anticodon-binding domain of tRNA At12D13_13250 PF10458 Valyl tRNA synthetase tRNA binding arm At12D13_13350 PF03358 NADPH-dependent FMN reductase At12D13_13360 PF18146 Damage-inducible protein CinA KH domain At12D13_13360 PF02464 Competence-damaged protein At12D13_13360 PF00994 Probable molybdopterin binding domain At12D13_13370 PF00582 Universal stress protein family At12D13_13380 PF00156 Phosphoribosyl transferase domain At12D13_13390 PF02867 Ribonucleotide reductase, barrel domain At12D13_13390 PF08471 Class II vitamin B12-dependent ribonucleotide reductase At12D13_13420 PF01566 Natural resistance-associated macrophage protein At12D13_13440 PF00005 ABC transporter At12D13_13440 PF00664 ABC transporter transmembrane region At12D13_13450 PF01594 AI-2E family transporter At12D13_13460 PF00583 Acetyltransferase (GNAT) family At12D13_13490 PF01613 Flavin reductase like domain At12D13_13520 PF03129 Anticodon binding domain At12D13_13520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At12D13_13520 PF02824 TGS domain At12D13_13520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At12D13_13540 PF01809 Putative membrane protein insertion efficiency factor At12D13_13560 PF01227 GTP cyclohydrolase I At12D13_13570 PF01502 Phosphoribosyl-AMP cyclohydrolase At12D13_13580 PF01734 Patatin-like phospholipase At12D13_13590 PF00478 IMP dehydrogenase / GMP reductase domain At12D13_13590 PF00571 CBS domain At12D13_13650 PF03313 Serine dehydratase alpha chain At12D13_13650 PF03315 Serine dehydratase beta chain At12D13_13720 PF03466 LysR substrate binding domain At12D13_13720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_13740 PF01965 DJ-1/PfpI family At12D13_13740 PF12833 Helix-turn-helix domain At12D13_13750 PF01256 Carbohydrate kinase At12D13_13750 PF03853 YjeF-related protein N-terminus At12D13_13760 PF00543 Nitrogen regulatory protein P-II At12D13_13770 PF03951 Glutamine synthetase, beta-Grasp domain At12D13_13770 PF00120 Glutamine synthetase, catalytic domain At12D13_13790 PF08755 Hemimethylated DNA-binding protein YccV like At12D13_13810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_13830 PF00892 EamA-like transporter family At12D13_13850 PF00270 DEAD/DEAH box helicase At12D13_13850 PF17757 UvrB interaction domain At12D13_13850 PF03461 TRCF domain At12D13_13850 PF02559 CarD-like/TRCF domain At12D13_13850 PF00271 Helicase conserved C-terminal domain At12D13_13870 PF00270 DEAD/DEAH box helicase At12D13_13870 PF00271 Helicase conserved C-terminal domain At12D13_13870 PF17191 RecG wedge domain At12D13_13890 PF05016 ParE toxin of type II toxin-antitoxin system, parDE At12D13_13900 PF01402 Ribbon-helix-helix protein, copG family At12D13_13930 PF01380 SIS domain At12D13_13940 PF14602 Hexapeptide repeat of succinyl-transferase At12D13_13940 PF12804 MobA-like NTP transferase domain At12D13_13940 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_13950 PF07729 FCD domain At12D13_13950 PF00392 Bacterial regulatory proteins, gntR family At12D13_13960 PF02608 ABC transporter substrate-binding protein PnrA-like At12D13_13990 PF00005 ABC transporter At12D13_14010 PF01494 FAD binding domain At12D13_14020 PF03547 Membrane transport protein At12D13_14030 PF02683 Cytochrome C biogenesis protein transmembrane region At12D13_14090 PF00313 'Cold-shock' DNA-binding domain At12D13_14170 PF00561 alpha/beta hydrolase fold At12D13_14200 PF00005 ABC transporter At12D13_14200 PF12704 MacB-like periplasmic core domain At12D13_14200 PF02687 FtsX-like permease family At12D13_14210 PF12704 MacB-like periplasmic core domain At12D13_14210 PF02687 FtsX-like permease family At12D13_14210 PF00005 ABC transporter At12D13_14230 PF01521 Iron-sulphur cluster biosynthesis At12D13_14240 PF01883 Iron-sulfur cluster assembly protein At12D13_14250 PF00266 Aminotransferase class-V At12D13_14260 PF01458 Uncharacterized protein family (UPF0051) At12D13_14270 PF00005 ABC transporter At12D13_14290 PF01458 Uncharacterized protein family (UPF0051) At12D13_14300 PF00266 Aminotransferase class-V At12D13_14310 PF02129 X-Pro dipeptidyl-peptidase (S15 family) At12D13_14320 PF03702 Anhydro-N-acetylmuramic acid kinase At12D13_14330 PF00579 tRNA synthetases class I (W and Y) At12D13_14350 PF00578 AhpC/TSA family At12D13_14360 PF04305 Protein of unknown function (DUF455) At12D13_14370 PF01551 Peptidase family M23 At12D13_14370 PF08525 Opacity-associated protein A N-terminal motif At12D13_14370 PF01476 LysM domain At12D13_14380 PF00270 DEAD/DEAH box helicase At12D13_14380 PF00271 Helicase conserved C-terminal domain At12D13_14420 PF00834 Ribulose-phosphate 3 epimerase family At12D13_14440 PF00206 Lyase At12D13_14440 PF10397 Adenylosuccinate lyase C-terminus At12D13_14460 PF01259 SAICAR synthetase At12D13_14470 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase At12D13_14510 PF00155 Aminotransferase class I and II At12D13_14510 PF00392 Bacterial regulatory proteins, gntR family At12D13_14530 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain At12D13_14530 PF00586 AIR synthase related protein, N-terminal domain At12D13_14530 PF02769 AIR synthase related protein, C-terminal domain At12D13_14570 PF00462 Glutaredoxin At12D13_14580 PF07690 Major Facilitator Superfamily At12D13_14590 PF00459 Inositol monophosphatase family At12D13_14600 PF00459 Inositol monophosphatase family At12D13_14610 PF01171 PP-loop family At12D13_14620 PF04960 Glutaminase At12D13_14630 PF00163 Ribosomal protein S4/S9 N-terminal domain At12D13_14630 PF01479 S4 domain At12D13_14640 PF03741 Integral membrane protein TerC family At12D13_14660 PF00892 EamA-like transporter family At12D13_14670 PF01810 LysE type translocator At12D13_14700 PF01177 Asp/Glu/Hydantoin racemase At12D13_14710 PF00588 SpoU rRNA Methylase family At12D13_14730 PF00180 Isocitrate/isopropylmalate dehydrogenase At12D13_14780 PF01411 tRNA synthetases class II (A) At12D13_14780 PF02272 DHHA1 domain At12D13_14780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At12D13_14790 PF00154 recA bacterial DNA recombination protein At12D13_14800 PF00294 pfkB family carbohydrate kinase At12D13_14810 PF04227 Indigoidine synthase A like protein At12D13_14820 PF00691 OmpA family At12D13_14820 PF01389 OmpA-like transmembrane domain At12D13_14830 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_14840 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_14850 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_14860 PF06233 Usg-like family At12D13_14880 PF09084 NMT1/THI5 like At12D13_14890 PF01037 Lrp/AsnC ligand binding domain At12D13_14890 PF13404 AsnC-type helix-turn-helix domain At12D13_14900 PF03167 Uracil DNA glycosylase superfamily At12D13_14920 PF00989 PAS fold At12D13_14920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_14920 PF00512 His Kinase A (phospho-acceptor) domain At12D13_14930 PF01219 Prokaryotic diacylglycerol kinase At12D13_14940 PF02277 Phosphoribosyltransferase At12D13_14950 PF02654 Cobalamin-5-phosphate synthase At12D13_14980 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase At12D13_15000 PF00005 ABC transporter At12D13_15010 PF13407 Periplasmic binding protein domain At12D13_15020 PF02653 Branched-chain amino acid transport system / permease component At12D13_15030 PF00456 Transketolase, thiamine diphosphate binding domain At12D13_15040 PF02780 Transketolase, C-terminal domain At12D13_15040 PF02779 Transketolase, pyrimidine binding domain At12D13_15050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At12D13_15050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At12D13_15060 PF04198 Putative sugar-binding domain At12D13_15070 PF00106 short chain dehydrogenase At12D13_15080 PF01061 ABC-2 type transporter At12D13_15090 PF00005 ABC transporter At12D13_15100 PF01925 Sulfite exporter TauE/SafE At12D13_15120 PF17200 Single Cache domain 2 At12D13_15120 PF00672 HAMP domain At12D13_15120 PF17200 Single Cache domain 2 At12D13_15120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_15120 PF00672 HAMP domain At12D13_15120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_15140 PF16193 AAA C-terminal domain At12D13_15140 PF12002 MgsA AAA+ ATPase C terminal At12D13_15140 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_15150 PF13180 PDZ domain At12D13_15150 PF00595 PDZ domain At12D13_15180 PF00920 Dehydratase family At12D13_15190 PF00174 Oxidoreductase molybdopterin binding domain At12D13_15200 PF01794 Ferric reductase like transmembrane component At12D13_15220 PF05675 Protein of unknown function (DUF817) At12D13_15230 PF01196 Ribosomal protein L17 At12D13_15240 PF01000 RNA polymerase Rpb3/RpoA insert domain At12D13_15240 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain At12D13_15240 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain At12D13_15250 PF00411 Ribosomal protein S11 At12D13_15260 PF00416 Ribosomal protein S13/S18 At12D13_15280 PF00344 SecY translocase At12D13_15290 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A At12D13_15300 PF00327 Ribosomal protein L30p/L7e At12D13_15310 PF00333 Ribosomal protein S5, N-terminal domain At12D13_15310 PF03719 Ribosomal protein S5, C-terminal domain At12D13_15320 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast At12D13_15330 PF00347 Ribosomal protein L6 At12D13_15340 PF00410 Ribosomal protein S8 At12D13_15350 PF00253 Ribosomal protein S14p/S29e At12D13_15360 PF00673 ribosomal L5P family C-terminus At12D13_15360 PF00281 Ribosomal protein L5 At12D13_15370 PF00467 KOW motif At12D13_15370 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 At12D13_15380 PF00238 Ribosomal protein L14p/L23e At12D13_15390 PF00366 Ribosomal protein S17 At12D13_15400 PF00831 Ribosomal L29 protein At12D13_15410 PF00252 Ribosomal protein L16p/L10e At12D13_15420 PF07650 KH domain At12D13_15420 PF00189 Ribosomal protein S3, C-terminal domain At12D13_15430 PF00237 Ribosomal protein L22p/L17e At12D13_15440 PF00203 Ribosomal protein S19 At12D13_15450 PF00181 Ribosomal Proteins L2, RNA binding domain At12D13_15450 PF03947 Ribosomal Proteins L2, C-terminal domain At12D13_15460 PF00276 Ribosomal protein L23 At12D13_15470 PF00573 Ribosomal protein L4/L1 family At12D13_15480 PF00297 Ribosomal protein L3 At12D13_15490 PF00338 Ribosomal protein S10p/S20e At12D13_15500 PF03143 Elongation factor Tu C-terminal domain At12D13_15500 PF00009 Elongation factor Tu GTP binding domain At12D13_15500 PF03144 Elongation factor Tu domain 2 At12D13_15510 PF00009 Elongation factor Tu GTP binding domain At12D13_15510 PF14492 Elongation Factor G, domain II At12D13_15510 PF00679 Elongation factor G C-terminus At12D13_15510 PF03764 Elongation factor G, domain IV At12D13_15510 PF03144 Elongation factor Tu domain 2 At12D13_15520 PF00177 Ribosomal protein S7p/S5e At12D13_15530 PF00164 Ribosomal protein S12/S23 At12D13_15570 PF04997 RNA polymerase Rpb1, domain 1 At12D13_15570 PF05000 RNA polymerase Rpb1, domain 4 At12D13_15570 PF04998 RNA polymerase Rpb1, domain 5 At12D13_15570 PF04983 RNA polymerase Rpb1, domain 3 At12D13_15570 PF00623 RNA polymerase Rpb1, domain 2 At12D13_15580 PF04565 RNA polymerase Rpb2, domain 3 At12D13_15580 PF04561 RNA polymerase Rpb2, domain 2 At12D13_15580 PF10385 RNA polymerase beta subunit external 1 domain At12D13_15580 PF04563 RNA polymerase beta subunit At12D13_15580 PF00562 RNA polymerase Rpb2, domain 6 At12D13_15580 PF04560 RNA polymerase Rpb2, domain 7 At12D13_15590 PF00542 Ribosomal protein L7/L12 C-terminal domain At12D13_15590 PF16320 Ribosomal protein L7/L12 dimerisation domain At12D13_15600 PF00466 Ribosomal protein L10 At12D13_15610 PF00687 Ribosomal protein L1p/L10e family At12D13_15620 PF00298 Ribosomal protein L11, RNA binding domain At12D13_15620 PF03946 Ribosomal protein L11, N-terminal domain At12D13_15630 PF02357 Transcription termination factor nusG At12D13_15630 PF00467 KOW motif At12D13_15640 PF00584 SecE/Sec61-gamma subunits of protein translocation complex At12D13_15650 PF08485 Polysaccharide biosynthesis protein C-terminal At12D13_15650 PF02719 Polysaccharide biosynthesis protein At12D13_15660 PF03143 Elongation factor Tu C-terminal domain At12D13_15660 PF03144 Elongation factor Tu domain 2 At12D13_15660 PF00009 Elongation factor Tu GTP binding domain At12D13_15670 PF03741 Integral membrane protein TerC family At12D13_15690 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme At12D13_15750 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_15750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At12D13_15800 PF04542 Sigma-70 region 2 At12D13_15800 PF04545 Sigma-70, region 4 At12D13_15820 PF02954 Bacterial regulatory protein, Fis family At12D13_15820 PF00072 Response regulator receiver domain At12D13_15820 PF00158 Sigma-54 interaction domain At12D13_15830 PF00072 Response regulator receiver domain At12D13_15830 PF08769 Sporulation initiation factor Spo0A C terminal At12D13_15840 PF01627 Hpt domain At12D13_15840 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_15840 PF00512 His Kinase A (phospho-acceptor) domain At12D13_15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_15840 PF00072 Response regulator receiver domain At12D13_15850 PF00072 Response regulator receiver domain At12D13_15860 PF07536 HWE histidine kinase At12D13_15860 PF08447 PAS fold At12D13_15860 PF13426 PAS domain At12D13_15870 PF00072 Response regulator receiver domain At12D13_15880 PF00512 His Kinase A (phospho-acceptor) domain At12D13_15880 PF00360 Phytochrome region At12D13_15880 PF01590 GAF domain At12D13_15880 PF08446 PAS fold At12D13_15880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_15890 PF00588 SpoU rRNA Methylase family At12D13_15890 PF08032 RNA 2'-O ribose methyltransferase substrate binding At12D13_15900 PF03061 Thioesterase superfamily At12D13_15950 PF13460 NAD(P)H-binding At12D13_15960 PF01638 HxlR-like helix-turn-helix At12D13_15970 PF17757 UvrB interaction domain At12D13_15970 PF00271 Helicase conserved C-terminal domain At12D13_15970 PF04851 Type III restriction enzyme, res subunit At12D13_15970 PF02151 UvrB/uvrC motif At12D13_15970 PF12344 Ultra-violet resistance protein B At12D13_16020 PF00226 DnaJ domain At12D13_16020 PF00684 DnaJ central domain At12D13_16020 PF01556 DnaJ C terminal domain At12D13_16040 PF17151 Periplasmic sensor domain At12D13_16040 PF00990 Diguanylate cyclase, GGDEF domain At12D13_16060 PF08402 TOBE domain At12D13_16060 PF00005 ABC transporter At12D13_16080 PF01547 Bacterial extracellular solute-binding protein At12D13_16090 PF00155 Aminotransferase class I and II At12D13_16100 PF05025 RbsD / FucU transport protein family At12D13_16110 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system At12D13_16130 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain At12D13_16130 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain At12D13_16150 PF12833 Helix-turn-helix domain At12D13_16150 PF06719 AraC-type transcriptional regulator N-terminus At12D13_16160 PF00107 Zinc-binding dehydrogenase At12D13_16160 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_16170 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_16180 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ At12D13_16190 PF03472 Autoinducer binding domain At12D13_16190 PF00196 Bacterial regulatory proteins, luxR family At12D13_16200 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain At12D13_16200 PF13538 UvrD-like helicase C-terminal domain At12D13_16200 PF14490 Helix-hairpin-helix containing domain At12D13_16240 PF08281 Sigma-70, region 4 At12D13_16240 PF04542 Sigma-70 region 2 At12D13_16260 PF00248 Aldo/keto reductase family At12D13_16290 PF10369 Small subunit of acetolactate synthase At12D13_16300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At12D13_16300 PF00205 Thiamine pyrophosphate enzyme, central domain At12D13_16300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At12D13_16340 PF13302 Acetyltransferase (GNAT) domain At12D13_16360 PF13180 PDZ domain At12D13_16380 PF01145 SPFH domain / Band 7 family At12D13_16390 PF01145 SPFH domain / Band 7 family At12D13_16400 PF00186 Dihydrofolate reductase At12D13_16410 PF00303 Thymidylate synthase At12D13_16470 PF02913 FAD linked oxidases, C-terminal domain At12D13_16470 PF01565 FAD binding domain At12D13_16480 PF00873 AcrB/AcrD/AcrF family At12D13_16490 PF13533 Biotin-lipoyl like At12D13_16510 PF13361 UvrD-like helicase C-terminal domain At12D13_16510 PF00580 UvrD/REP helicase N-terminal domain At12D13_16530 PF00440 Bacterial regulatory proteins, tetR family At12D13_16530 PF13977 BetI-type transcriptional repressor, C-terminal At12D13_16540 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At12D13_16550 PF00561 alpha/beta hydrolase fold At12D13_16590 PF00857 Isochorismatase family At12D13_16630 PF00557 Metallopeptidase family M24 At12D13_16630 PF01321 Creatinase/Prolidase N-terminal domain At12D13_16670 PF02630 SCO1/SenC At12D13_16680 PF01584 CheW-like domain At12D13_16700 PF00929 Exonuclease At12D13_16710 PF03466 LysR substrate binding domain At12D13_16710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_16730 PF00583 Acetyltransferase (GNAT) family At12D13_16750 PF00533 BRCA1 C Terminus (BRCT) domain At12D13_16750 PF01653 NAD-dependent DNA ligase adenylation domain At12D13_16750 PF03119 NAD-dependent DNA ligase C4 zinc finger domain At12D13_16750 PF03120 NAD-dependent DNA ligase OB-fold domain At12D13_16750 PF12826 Helix-hairpin-helix motif At12D13_16760 PF02463 RecF/RecN/SMC N terminal domain At12D13_16770 PF13525 Outer membrane lipoprotein At12D13_16780 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase At12D13_16790 PF12327 FtsZ family, C-terminal domain At12D13_16790 PF00091 Tubulin/FtsZ family, GTPase domain At12D13_16800 PF02491 SHS2 domain inserted in FTSA At12D13_16810 PF03799 Cell division protein FtsQ At12D13_16810 PF08478 POTRA domain, FtsQ-type At12D13_16820 PF01820 D-ala D-ala ligase N-terminus At12D13_16820 PF07478 D-ala D-ala ligase C-terminus At12D13_16830 PF00083 Sugar (and other) transporter At12D13_16830 PF07690 Major Facilitator Superfamily At12D13_16840 PF03707 Bacterial signalling protein N terminal repeat At12D13_16840 PF00563 EAL domain At12D13_16840 PF13188 PAS domain At12D13_16840 PF00990 Diguanylate cyclase, GGDEF domain At12D13_16850 PF01565 FAD binding domain At12D13_16850 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain At12D13_16860 PF08245 Mur ligase middle domain At12D13_16860 PF02875 Mur ligase family, glutamate ligase domain At12D13_16860 PF01225 Mur ligase family, catalytic domain At12D13_16870 PF03033 Glycosyltransferase family 28 N-terminal domain At12D13_16870 PF04101 Glycosyltransferase family 28 C-terminal domain At12D13_16880 PF01098 Cell cycle protein At12D13_16890 PF02875 Mur ligase family, glutamate ligase domain At12D13_16890 PF08245 Mur ligase middle domain At12D13_16900 PF00953 Glycosyl transferase family 4 At12D13_16900 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 At12D13_16910 PF08245 Mur ligase middle domain At12D13_16910 PF02875 Mur ligase family, glutamate ligase domain At12D13_16910 PF01225 Mur ligase family, catalytic domain At12D13_16920 PF01225 Mur ligase family, catalytic domain At12D13_16920 PF02875 Mur ligase family, glutamate ligase domain At12D13_16920 PF08245 Mur ligase middle domain At12D13_16930 PF00905 Penicillin binding protein transpeptidase domain At12D13_16930 PF03717 Penicillin-binding Protein dimerisation domain At12D13_16950 PF01795 MraW methylase family At12D13_16960 PF02381 MraZ protein, putative antitoxin-like At12D13_16970 PF03994 Domain of Unknown Function (DUF350) At12D13_16990 PF03738 Glutathionylspermidine synthase preATP-grasp At12D13_17030 PF01510 N-acetylmuramoyl-L-alanine amidase At12D13_17040 PF05099 Tellurite resistance protein TerB At12D13_17040 PF00226 DnaJ domain At12D13_17050 PF00365 Phosphofructokinase At12D13_17090 PF13649 Methyltransferase domain At12D13_17100 PF01183 Glycosyl hydrolases family 25 At12D13_17120 PF02219 Methylenetetrahydrofolate reductase At12D13_17130 PF01209 ubiE/COQ5 methyltransferase family At12D13_17140 PF00005 ABC transporter At12D13_17140 PF12848 ABC transporter At12D13_17150 PF12146 Serine aminopeptidase, S33 At12D13_17160 PF02515 CoA-transferase family III At12D13_17170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At12D13_17170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At12D13_17170 PF00205 Thiamine pyrophosphate enzyme, central domain At12D13_17190 PF01042 Endoribonuclease L-PSP At12D13_17220 PF01476 LysM domain At12D13_17220 PF03734 L,D-transpeptidase catalytic domain At12D13_17230 PF07690 Major Facilitator Superfamily At12D13_17250 PF10609 NUBPL iron-transfer P-loop NTPase At12D13_17270 PF00465 Iron-containing alcohol dehydrogenase At12D13_17280 PF00171 Aldehyde dehydrogenase family At12D13_17310 PF00120 Glutamine synthetase, catalytic domain At12D13_17310 PF03951 Glutamine synthetase, beta-Grasp domain At12D13_17320 PF13520 Amino acid permease At12D13_17340 PF01380 SIS domain At12D13_17340 PF01418 Helix-turn-helix domain, rpiR family At12D13_17380 PF08402 TOBE domain At12D13_17380 PF00005 ABC transporter At12D13_17390 PF00107 Zinc-binding dehydrogenase At12D13_17390 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_17420 PF07690 Major Facilitator Superfamily At12D13_17430 PF02607 B12 binding domain At12D13_17430 PF02965 Vitamin B12 dependent methionine synthase, activation domain At12D13_17430 PF02574 Homocysteine S-methyltransferase At12D13_17430 PF00809 Pterin binding enzyme At12D13_17430 PF02310 B12 binding domain At12D13_17470 PF13505 Outer membrane protein beta-barrel domain At12D13_17680 PF04402 Protein of unknown function (DUF541) At12D13_17700 PF01894 Uncharacterised protein family UPF0047 At12D13_17710 PF08446 PAS fold At12D13_17710 PF00512 His Kinase A (phospho-acceptor) domain At12D13_17710 PF01590 GAF domain At12D13_17710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_17710 PF00360 Phytochrome region At12D13_17730 PF04542 Sigma-70 region 2 At12D13_17730 PF00140 Sigma-70 factor, region 1.2 At12D13_17730 PF03979 Sigma-70 factor, region 1.1 At12D13_17730 PF04545 Sigma-70, region 4 At12D13_17730 PF04539 Sigma-70 region 3 At12D13_17730 PF04546 Sigma-70, non-essential region At12D13_17740 PF01807 CHC2 zinc finger At12D13_17740 PF10410 DnaB-helicase binding domain of primase At12D13_17740 PF08275 DNA primase catalytic core, N-terminal domain At12D13_17740 PF08278 DNA primase DnaG DnaB-binding At12D13_17760 PF00117 Glutamine amidotransferase class-I At12D13_17760 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain At12D13_17770 PF01554 MatE At12D13_17780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_17780 PF00672 HAMP domain At12D13_17780 PF02743 Cache domain At12D13_17800 PF04228 Putative neutral zinc metallopeptidase At12D13_17830 PF02142 MGS-like domain At12D13_17830 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain At12D13_17830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_17850 PF00990 Diguanylate cyclase, GGDEF domain At12D13_17850 PF07694 5TMR of 5TMR-LYT At12D13_17880 PF03449 Transcription elongation factor, N-terminal At12D13_17880 PF01272 Transcription elongation factor, GreA/GreB, C-term At12D13_17890 PF00534 Glycosyl transferases group 1 At12D13_17900 PF01037 Lrp/AsnC ligand binding domain At12D13_17910 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_17920 PF03466 LysR substrate binding domain At12D13_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_17940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At12D13_17970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_17970 PF03466 LysR substrate binding domain At12D13_17990 PF01699 Sodium/calcium exchanger protein At12D13_18010 PF05231 MASE1 At12D13_18010 PF00563 EAL domain At12D13_18040 PF00313 'Cold-shock' DNA-binding domain At12D13_18050 PF00753 Metallo-beta-lactamase superfamily At12D13_18070 PF12802 MarR family At12D13_18080 PF00072 Response regulator receiver domain At12D13_18080 PF00486 Transcriptional regulatory protein, C terminal At12D13_18090 PF00512 His Kinase A (phospho-acceptor) domain At12D13_18090 PF00672 HAMP domain At12D13_18090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_18090 PF16527 Two-component sensor protein CpxA, periplasmic domain At12D13_18100 PF01588 Putative tRNA binding domain At12D13_18110 PF14748 Pyrroline-5-carboxylate reductase dimerisation At12D13_18110 PF03807 NADP oxidoreductase coenzyme F420-dependent At12D13_18140 PF01790 Prolipoprotein diacylglyceryl transferase At12D13_18190 PF14572 Phosphoribosyl synthetase-associated domain At12D13_18190 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase At12D13_18210 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase At12D13_18230 PF00535 Glycosyl transferase family 2 At12D13_18240 PF00672 HAMP domain At12D13_18240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_18250 PF00171 Aldehyde dehydrogenase family At12D13_18260 PF02954 Bacterial regulatory protein, Fis family At12D13_18270 PF00563 EAL domain At12D13_18270 PF00990 Diguanylate cyclase, GGDEF domain At12D13_18270 PF03707 Bacterial signalling protein N terminal repeat At12D13_18270 PF13188 PAS domain At12D13_18290 PF01386 Ribosomal L25p family At12D13_18290 PF14693 Ribosomal protein TL5, C-terminal domain At12D13_18300 PF08448 PAS fold At12D13_18300 PF08447 PAS fold At12D13_18300 PF00563 EAL domain At12D13_18300 PF00990 Diguanylate cyclase, GGDEF domain At12D13_18320 PF01195 Peptidyl-tRNA hydrolase At12D13_18340 PF02617 ATP-dependent Clp protease adaptor protein ClpS At12D13_18350 PF06071 Protein of unknown function (DUF933) At12D13_18350 PF01926 50S ribosome-binding GTPase At12D13_18380 PF00156 Phosphoribosyl transferase domain At12D13_18400 PF02167 Cytochrome C1 family At12D13_18400 PF00033 Cytochrome b/b6/petB At12D13_18400 PF00032 Cytochrome b(C-terminal)/b6/petD At12D13_18410 PF00033 Cytochrome b/b6/petB At12D13_18410 PF00032 Cytochrome b(C-terminal)/b6/petD At12D13_18420 PF00355 Rieske [2Fe-2S] domain At12D13_18420 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal At12D13_18440 PF00005 ABC transporter At12D13_18440 PF00664 ABC transporter transmembrane region At12D13_18450 PF00664 ABC transporter transmembrane region At12D13_18450 PF00005 ABC transporter At12D13_18460 PF00149 Calcineurin-like phosphoesterase At12D13_18470 PF00588 SpoU rRNA Methylase family At12D13_18480 PF02690 Na+/Pi-cotransporter At12D13_18500 PF01218 Coproporphyrinogen III oxidase At12D13_18530 PF13735 tRNA nucleotidyltransferase domain 2 putative At12D13_18530 PF12627 Probable RNA and SrmB- binding site of polymerase A At12D13_18530 PF01743 Poly A polymerase head domain At12D13_18540 PF00293 NUDIX domain At12D13_18560 PF07726 ATPase family associated with various cellular activities (AAA) At12D13_18560 PF17863 AAA lid domain At12D13_18600 PF00583 Acetyltransferase (GNAT) family At12D13_18610 PF07690 Major Facilitator Superfamily At12D13_18630 PF13409 Glutathione S-transferase, N-terminal domain At12D13_18640 PF13344 Haloacid dehalogenase-like hydrolase At12D13_18640 PF00293 NUDIX domain At12D13_18660 PF00682 HMGL-like At12D13_18660 PF08502 LeuA allosteric (dimerisation) domain At12D13_18670 PF03594 Benzoate membrane transport protein At12D13_18700 PF08281 Sigma-70, region 4 At12D13_18700 PF04542 Sigma-70 region 2 At12D13_18720 PF00574 Clp protease At12D13_18730 PF04955 HupE / UreJ protein At12D13_18750 PF14489 QueF-like protein At12D13_18760 PF16916 Dimerisation domain of Zinc Transporter At12D13_18760 PF01545 Cation efflux family At12D13_18780 PF13458 Periplasmic binding protein At12D13_18800 PF01022 Bacterial regulatory protein, arsR family At12D13_18810 PF00571 CBS domain At12D13_18810 PF00005 ABC transporter At12D13_18820 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_18830 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At12D13_18840 PF00265 Thymidine kinase At12D13_18850 PF00127 Copper binding proteins, plastocyanin/azurin family At12D13_18870 PF03472 Autoinducer binding domain At12D13_18870 PF00196 Bacterial regulatory proteins, luxR family At12D13_18880 PF03350 Uncharacterized protein family, UPF0114 At12D13_18890 PF07715 TonB-dependent Receptor Plug Domain At12D13_18890 PF04886 PT repeat At12D13_18890 PF00593 TonB dependent receptor At12D13_18910 PF00117 Glutamine amidotransferase class-I At12D13_18910 PF04715 Anthranilate synthase component I, N terminal region At12D13_18910 PF00425 chorismate binding enzyme At12D13_18930 PF11871 Domain of unknown function (DUF3391) At12D13_18930 PF01966 HD domain At12D13_18940 PF13382 Adenine deaminase C-terminal domain At12D13_18940 PF01979 Amidohydrolase family At12D13_18960 PF00583 Acetyltransferase (GNAT) family At12D13_18970 PF00128 Alpha amylase, catalytic domain At12D13_18980 PF00294 pfkB family carbohydrate kinase At12D13_19020 PF01926 50S ribosome-binding GTPase At12D13_19020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal At12D13_19060 PF05992 SbmA/BacA-like family At12D13_19080 PF00557 Metallopeptidase family M24 At12D13_19110 PF00111 2Fe-2S iron-sulfur cluster binding domain At12D13_19110 PF01799 [2Fe-2S] binding domain At12D13_19120 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain At12D13_19120 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase At12D13_19150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_19150 PF03466 LysR substrate binding domain At12D13_19180 PF01979 Amidohydrolase family At12D13_19210 PF01070 FMN-dependent dehydrogenase At12D13_19220 PF00893 Small Multidrug Resistance protein At12D13_19230 PF00440 Bacterial regulatory proteins, tetR family At12D13_19230 PF17932 Tetracyclin repressor-like, C-terminal domain At12D13_19240 PF07943 Penicillin-binding protein 5, C-terminal domain At12D13_19240 PF00768 D-alanyl-D-alanine carboxypeptidase At12D13_19260 PF00576 HIUase/Transthyretin family At12D13_19270 PF04115 Ureidoglycolate lyase At12D13_19300 PF01014 Uricase At12D13_19300 PF09349 OHCU decarboxylase At12D13_19320 PF06299 Protein of unknown function (DUF1045) At12D13_19330 PF01266 FAD dependent oxidoreductase At12D13_19340 PF05430 S-adenosyl-L-methionine-dependent methyltransferase At12D13_19340 PF01266 FAD dependent oxidoreductase At12D13_19350 PF00072 Response regulator receiver domain At12D13_19350 PF01627 Hpt domain At12D13_19350 PF00512 His Kinase A (phospho-acceptor) domain At12D13_19350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_19350 PF00672 HAMP domain At12D13_19350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) At12D13_19360 PF00270 DEAD/DEAH box helicase At12D13_19360 PF00271 Helicase conserved C-terminal domain At12D13_19370 PF00892 EamA-like transporter family At12D13_19380 PF07681 DoxX At12D13_19390 PF03734 L,D-transpeptidase catalytic domain At12D13_19390 PF01476 LysM domain At12D13_19410 PF14403 Circularly permuted ATP-grasp type 2 At12D13_19430 PF01841 Transglutaminase-like superfamily At12D13_19430 PF08379 Bacterial transglutaminase-like N-terminal region At12D13_19460 PF00583 Acetyltransferase (GNAT) family At12D13_19490 PF02653 Branched-chain amino acid transport system / permease component At12D13_19500 PF00005 ABC transporter At12D13_19510 PF13407 Periplasmic binding protein domain At12D13_19520 PF03466 LysR substrate binding domain At12D13_19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_19570 PF01757 Acyltransferase family At12D13_19590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_19590 PF00672 HAMP domain At12D13_19600 PF07690 Major Facilitator Superfamily At12D13_19610 PF02219 Methylenetetrahydrofolate reductase At12D13_19610 PF02574 Homocysteine S-methyltransferase At12D13_19620 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_19630 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_19640 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_19650 PF00005 ABC transporter At12D13_19680 PF00331 Glycosyl hydrolase family 10 At12D13_19690 PF00535 Glycosyl transferase family 2 At12D13_19720 PF03808 Glycosyl transferase WecB/TagA/CpsF family At12D13_19750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At12D13_19750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At12D13_19750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At12D13_19750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At12D13_19760 PF01152 Bacterial-like globin At12D13_19800 PF00440 Bacterial regulatory proteins, tetR family At12D13_19800 PF08362 YcdC-like protein, C-terminal region At12D13_19810 PF01546 Peptidase family M20/M25/M40 At12D13_19810 PF07687 Peptidase dimerisation domain At12D13_19820 PF01979 Amidohydrolase family At12D13_19830 PF00293 NUDIX domain At12D13_19840 PF00005 ABC transporter At12D13_19850 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_19860 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_19890 PF00873 AcrB/AcrD/AcrF family At12D13_19910 PF12706 Beta-lactamase superfamily domain At12D13_19910 PF00753 Metallo-beta-lactamase superfamily At12D13_19920 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_19930 PF01730 UreF At12D13_19940 PF02814 UreE urease accessory protein, N-terminal domain At12D13_19940 PF05194 UreE urease accessory protein, C-terminal domain At12D13_19950 PF08534 Redoxin At12D13_19970 PF01979 Amidohydrolase family At12D13_19970 PF00449 Urease alpha-subunit, N-terminal domain At12D13_19990 PF07007 Lysozyme inhibitor LprI At12D13_20010 PF00699 Urease beta subunit At12D13_20020 PF06906 Protein of unknown function (DUF1272) At12D13_20030 PF00547 Urease, gamma subunit At12D13_20040 PF01774 UreD urease accessory protein At12D13_20060 PF00005 ABC transporter At12D13_20070 PF00005 ABC transporter At12D13_20070 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_20090 PF02653 Branched-chain amino acid transport system / permease component At12D13_20110 PF10931 Protein of unknown function (DUF2735) At12D13_20120 PF03951 Glutamine synthetase, beta-Grasp domain At12D13_20120 PF00120 Glutamine synthetase, catalytic domain At12D13_20130 PF00106 short chain dehydrogenase At12D13_20140 PF00989 PAS fold At12D13_20140 PF01627 Hpt domain At12D13_20140 PF18415 Histidine kinase receptor ArcB trans-membrane domain At12D13_20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_20140 PF00512 His Kinase A (phospho-acceptor) domain At12D13_20140 PF00072 Response regulator receiver domain At12D13_20150 PF00072 Response regulator receiver domain At12D13_20170 PF01522 Polysaccharide deacetylase At12D13_20180 PF13458 Periplasmic binding protein At12D13_20200 PF00005 ABC transporter At12D13_20210 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_20210 PF00005 ABC transporter At12D13_20220 PF02653 Branched-chain amino acid transport system / permease component At12D13_20220 PF11862 Domain of unknown function (DUF3382) At12D13_20230 PF02653 Branched-chain amino acid transport system / permease component At12D13_20240 PF00459 Inositol monophosphatase family At12D13_20300 PF00486 Transcriptional regulatory protein, C terminal At12D13_20300 PF00072 Response regulator receiver domain At12D13_20350 PF10090 Histidine phosphotransferase C-terminal domain At12D13_20380 PF00588 SpoU rRNA Methylase family At12D13_20400 PF00849 RNA pseudouridylate synthase At12D13_20430 PF00140 Sigma-70 factor, region 1.2 At12D13_20430 PF04545 Sigma-70, region 4 At12D13_20430 PF04542 Sigma-70 region 2 At12D13_20450 PF00709 Adenylosuccinate synthetase At12D13_20500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_20520 PF03167 Uracil DNA glycosylase superfamily At12D13_20530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_20540 PF04304 Protein of unknown function (DUF454) At12D13_20550 PF00005 ABC transporter At12D13_20560 PF01032 FecCD transport family At12D13_20570 PF01497 Periplasmic binding protein At12D13_20590 PF06228 Haem utilisation ChuX/HutX At12D13_20610 PF00551 Formyl transferase At12D13_20620 PF00672 HAMP domain At12D13_20620 PF00512 His Kinase A (phospho-acceptor) domain At12D13_20620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_20630 PF00486 Transcriptional regulatory protein, C terminal At12D13_20630 PF00072 Response regulator receiver domain At12D13_20650 PF03401 Tripartite tricarboxylate transporter family receptor At12D13_20670 PF01970 Tripartite tricarboxylate transporter TctA family At12D13_20700 PF01032 FecCD transport family At12D13_20710 PF01032 FecCD transport family At12D13_20720 PF00005 ABC transporter At12D13_20730 PF00210 Ferritin-like domain At12D13_20750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_20750 PF03466 LysR substrate binding domain At12D13_20770 PF13533 Biotin-lipoyl like At12D13_20780 PF00873 AcrB/AcrD/AcrF family At12D13_20810 PF13091 PLD-like domain At12D13_20810 PF13396 Phospholipase_D-nuclease N-terminal At12D13_20820 PF08543 Phosphomethylpyrimidine kinase At12D13_20830 PF00484 Carbonic anhydrase At12D13_20850 PF02774 Semialdehyde dehydrogenase, dimerisation domain At12D13_20850 PF01118 Semialdehyde dehydrogenase, NAD binding domain At12D13_20860 PF00083 Sugar (and other) transporter At12D13_20870 PF05222 Alanine dehydrogenase/PNT, N-terminal domain At12D13_20870 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch At12D13_20870 PF01262 Alanine dehydrogenase/PNT, C-terminal domain At12D13_20880 PF02233 NAD(P) transhydrogenase beta subunit At12D13_20890 PF01613 Flavin reductase like domain At12D13_20900 PF00881 Nitroreductase family At12D13_20910 PF00561 alpha/beta hydrolase fold At12D13_20920 PF01042 Endoribonuclease L-PSP At12D13_20930 PF00857 Isochorismatase family At12D13_20940 PF00296 Luciferase-like monooxygenase At12D13_20950 PF01126 Heme oxygenase At12D13_20960 PF00701 Dihydrodipicolinate synthetase family At12D13_20970 PF07729 FCD domain At12D13_20970 PF00392 Bacterial regulatory proteins, gntR family At12D13_20980 PF01547 Bacterial extracellular solute-binding protein At12D13_20990 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_21000 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_21010 PF17912 MalK OB fold domain At12D13_21010 PF00005 ABC transporter At12D13_21010 PF03459 TOBE domain At12D13_21020 PF00294 pfkB family carbohydrate kinase At12D13_21030 PF03576 Peptidase family S58 At12D13_21040 PF01063 Amino-transferase class IV At12D13_21050 PF03466 LysR substrate binding domain At12D13_21050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_21070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_21070 PF00005 ABC transporter At12D13_21080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_21080 PF00005 ABC transporter At12D13_21100 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_21110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_21120 PF01244 Membrane dipeptidase (Peptidase family M19) At12D13_21140 PF09924 Uncharacterised conserved protein (DUF2156) At12D13_21140 PF03706 Lysylphosphatidylglycerol synthase TM region At12D13_21180 PF07690 Major Facilitator Superfamily At12D13_21200 PF04444 Catechol dioxygenase N terminus At12D13_21200 PF00775 Dioxygenase At12D13_21210 PF00465 Iron-containing alcohol dehydrogenase At12D13_21220 PF04909 Amidohydrolase At12D13_21230 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At12D13_21230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_21240 PF01613 Flavin reductase like domain At12D13_21280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_21280 PF00512 His Kinase A (phospho-acceptor) domain At12D13_21290 PF00072 Response regulator receiver domain At12D13_21290 PF00486 Transcriptional regulatory protein, C terminal At12D13_21310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At12D13_21350 PF01259 SAICAR synthetase At12D13_21370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At12D13_21370 PF00529 HlyD membrane-fusion protein of T1SS At12D13_21380 PF00873 AcrB/AcrD/AcrF family At12D13_21390 PF02321 Outer membrane efflux protein At12D13_21400 PF09285 Elongation factor P, C-terminal At12D13_21400 PF08207 Elongation factor P (EF-P) KOW-like domain At12D13_21400 PF01132 Elongation factor P (EF-P) OB domain At12D13_21410 PF00152 tRNA synthetases class II (D, K and N) At12D13_21420 PF12544 Lysine-2,3-aminomutase At12D13_21420 PF04055 Radical SAM superfamily At12D13_21450 PF03466 LysR substrate binding domain At12D13_21450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_21460 PF01266 FAD dependent oxidoreductase At12D13_21480 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_21490 PF03459 TOBE domain At12D13_21490 PF00005 ABC transporter At12D13_21510 PF03576 Peptidase family S58 At12D13_21520 PF05690 Thiazole biosynthesis protein ThiG At12D13_21540 PF01266 FAD dependent oxidoreductase At12D13_21550 PF01964 Radical SAM ThiC family At12D13_21550 PF13667 ThiC-associated domain At12D13_21560 PF00550 Phosphopantetheine attachment site At12D13_21620 PF00664 ABC transporter transmembrane region At12D13_21620 PF00005 ABC transporter At12D13_21630 PF00027 Cyclic nucleotide-binding domain At12D13_21630 PF13545 Crp-like helix-turn-helix domain At12D13_21650 PF00211 Adenylate and Guanylate cyclase catalytic domain At12D13_21650 PF00672 HAMP domain At12D13_21670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain At12D13_21670 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain At12D13_21670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain At12D13_21680 PF13439 Glycosyltransferase Family 4 At12D13_21680 PF00534 Glycosyl transferases group 1 At12D13_21710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_21710 PF00005 ABC transporter At12D13_21720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_21730 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_21740 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_21740 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_21760 PF00534 Glycosyl transferases group 1 At12D13_21760 PF13439 Glycosyltransferase Family 4 At12D13_21770 PF04101 Glycosyltransferase family 28 C-terminal domain At12D13_21770 PF03033 Glycosyltransferase family 28 N-terminal domain At12D13_21780 PF03932 CutC family At12D13_21810 PF00728 Glycosyl hydrolase family 20, catalytic domain At12D13_21810 PF02838 Glycosyl hydrolase family 20, domain 2 At12D13_21830 PF01418 Helix-turn-helix domain, rpiR family At12D13_21830 PF01380 SIS domain At12D13_21850 PF00005 ABC transporter At12D13_21850 PF17912 MalK OB fold domain At12D13_21860 PF01547 Bacterial extracellular solute-binding protein At12D13_21870 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_21880 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_21910 PF01380 SIS domain At12D13_21920 PF01979 Amidohydrolase family At12D13_21930 PF00480 ROK family At12D13_21940 PF01494 FAD binding domain At12D13_21950 PF01569 PAP2 superfamily At12D13_21960 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain At12D13_21960 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase At12D13_21960 PF13288 DXP reductoisomerase C-terminal domain At12D13_21970 PF00155 Aminotransferase class I and II At12D13_21990 PF01103 Surface antigen At12D13_21990 PF07244 Surface antigen variable number repeat At12D13_21990 PF17243 POTRA domain TamA domain 1 At12D13_22010 PF01584 CheW-like domain At12D13_22020 PF13426 PAS domain At12D13_22020 PF08447 PAS fold At12D13_22020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_22030 PF02634 FdhD/NarQ family At12D13_22040 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain At12D13_22050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At12D13_22050 PF02874 ATP synthase alpha/beta family, beta-barrel domain At12D13_22060 PF00231 ATP synthase At12D13_22070 PF02874 ATP synthase alpha/beta family, beta-barrel domain At12D13_22070 PF00306 ATP synthase alpha/beta chain, C terminal domain At12D13_22070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At12D13_22080 PF00213 ATP synthase delta (OSCP) subunit At12D13_22100 PF18074 Primosomal protein N C-terminal domain At12D13_22100 PF17764 3′ DNA-binding domain (3′BD) At12D13_22100 PF00270 DEAD/DEAH box helicase At12D13_22100 PF18319 PriA DNA helicase Cys-rich region (CRR) domain At12D13_22110 PF02899 Phage integrase, N-terminal SAM-like domain At12D13_22110 PF00589 Phage integrase family At12D13_22150 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_22150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At12D13_22160 PF01810 LysE type translocator At12D13_22180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At12D13_22180 PF00364 Biotin-requiring enzyme At12D13_22180 PF02817 e3 binding domain At12D13_22190 PF00676 Dehydrogenase E1 component At12D13_22190 PF02779 Transketolase, pyrimidine binding domain At12D13_22190 PF16078 2-oxoglutarate dehydrogenase N-terminus At12D13_22190 PF16870 2-oxoglutarate dehydrogenase C-terminal At12D13_22200 PF02629 CoA binding domain At12D13_22200 PF00549 CoA-ligase At12D13_22210 PF00549 CoA-ligase At12D13_22210 PF08442 ATP-grasp domain At12D13_22220 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain At12D13_22220 PF00056 lactate/malate dehydrogenase, NAD binding domain At12D13_22230 PF03969 AFG1-like ATPase At12D13_22240 PF02974 Protease inhibitor Inh At12D13_22250 PF13237 4Fe-4S dicluster domain At12D13_22250 PF13085 2Fe-2S iron-sulfur cluster binding domain At12D13_22260 PF00890 FAD binding domain At12D13_22260 PF02910 Fumarate reductase flavoprotein C-term At12D13_22280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit At12D13_22330 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus At12D13_22330 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus At12D13_22340 PF00814 Glycoprotease family At12D13_22350 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain At12D13_22350 PF03900 Porphobilinogen deaminase, C-terminal domain At12D13_22400 PF00117 Glutamine amidotransferase class-I At12D13_22420 PF02325 YGGT family At12D13_22430 PF02594 Uncharacterised ACR, YggU family COG1872 At12D13_22440 PF00719 Inorganic pyrophosphatase At12D13_22480 PF01432 Peptidase family M3 At12D13_22490 PF01047 MarR family At12D13_22500 PF07690 Major Facilitator Superfamily At12D13_22510 PF00764 Arginosuccinate synthase At12D13_22520 PF00106 short chain dehydrogenase At12D13_22530 PF01810 LysE type translocator At12D13_22540 PF00005 ABC transporter At12D13_22550 PF02653 Branched-chain amino acid transport system / permease component At12D13_22570 PF04055 Radical SAM superfamily At12D13_22600 PF01329 Pterin 4 alpha carbinolamine dehydratase At12D13_22610 PF01451 Low molecular weight phosphotyrosine protein phosphatase At12D13_22620 PF02834 LigT like Phosphoesterase At12D13_22630 PF13472 GDSL-like Lipase/Acylhydrolase family At12D13_22640 PF00005 ABC transporter At12D13_22660 PF01027 Inhibitor of apoptosis-promoting Bax1 At12D13_22690 PF00694 Aconitase C-terminal domain At12D13_22690 PF00330 Aconitase family (aconitate hydratase) At12D13_22700 PF00005 ABC transporter At12D13_22710 PF03379 CcmB protein At12D13_22720 PF01578 Cytochrome C assembly protein At12D13_22740 PF08534 Redoxin At12D13_22750 PF00990 Diguanylate cyclase, GGDEF domain At12D13_22760 PF10755 Protein of unknown function (DUF2585) At12D13_22770 PF04279 Intracellular septation protein A At12D13_22780 PF00448 SRP54-type protein, GTPase domain At12D13_22780 PF02881 SRP54-type protein, helical bundle domain At12D13_22790 PF00919 Uncharacterized protein family UPF0004 At12D13_22790 PF04055 Radical SAM superfamily At12D13_22800 PF01678 Diaminopimelate epimerase At12D13_22810 PF12706 Beta-lactamase superfamily domain At12D13_22820 PF02978 Signal peptide binding domain At12D13_22820 PF02881 SRP54-type protein, helical bundle domain At12D13_22820 PF00448 SRP54-type protein, GTPase domain At12D13_22830 PF01817 Chorismate mutase type II At12D13_22830 PF02153 Prephenate dehydrogenase At12D13_22840 PF00886 Ribosomal protein S16 At12D13_22850 PF01782 RimM N-terminal domain At12D13_22850 PF05239 PRC-barrel domain At12D13_22860 PF01746 tRNA (Guanine-1)-methyltransferase At12D13_22880 PF01245 Ribosomal protein L19 At12D13_22890 PF00664 ABC transporter transmembrane region At12D13_22890 PF00005 ABC transporter At12D13_22900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At12D13_22900 PF00529 HlyD membrane-fusion protein of T1SS At12D13_22920 PF07690 Major Facilitator Superfamily At12D13_22930 PF00330 Aconitase family (aconitate hydratase) At12D13_22940 PF01435 Peptidase family M48 At12D13_22950 PF00005 ABC transporter At12D13_22960 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_22970 PF01547 Bacterial extracellular solute-binding protein At12D13_23010 PF04204 Homoserine O-succinyltransferase At12D13_23020 PF01263 Aldose 1-epimerase At12D13_23030 PF00912 Transglycosylase At12D13_23040 PF00348 Polyprenyl synthetase At12D13_23050 PF13488 Glycine zipper At12D13_23050 PF00691 OmpA family At12D13_23060 PF04551 GcpE protein At12D13_23070 PF07690 Major Facilitator Superfamily At12D13_23080 PF00455 DeoR C terminal sensor domain At12D13_23080 PF08220 DeoR-like helix-turn-helix domain At12D13_23090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_23090 PF00364 Biotin-requiring enzyme At12D13_23090 PF02436 Conserved carboxylase domain At12D13_23090 PF00682 HMGL-like At12D13_23090 PF00289 Biotin carboxylase, N-terminal domain At12D13_23090 PF02785 Biotin carboxylase C-terminal domain At12D13_23100 PF00196 Bacterial regulatory proteins, luxR family At12D13_23100 PF00072 Response regulator receiver domain At12D13_23110 PF00005 ABC transporter At12D13_23110 PF00664 ABC transporter transmembrane region At12D13_23130 PF10091 Putative glucoamylase At12D13_23130 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain At12D13_23130 PF06165 Glycosyltransferase family 36 At12D13_23140 PF01546 Peptidase family M20/M25/M40 At12D13_23140 PF07687 Peptidase dimerisation domain At12D13_23160 PF01266 FAD dependent oxidoreductase At12D13_23170 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_23180 PF00920 Dehydratase family At12D13_23190 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At12D13_23190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At12D13_23200 PF01370 NAD dependent epimerase/dehydratase family At12D13_23210 PF01565 FAD binding domain At12D13_23210 PF02913 FAD linked oxidases, C-terminal domain At12D13_23220 PF00392 Bacterial regulatory proteins, gntR family At12D13_23220 PF07729 FCD domain At12D13_23240 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At12D13_23250 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_23260 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_23270 PF00501 AMP-binding enzyme At12D13_23270 PF13193 AMP-binding enzyme C-terminal domain At12D13_23270 PF16177 Acetyl-coenzyme A synthetase N-terminus At12D13_23290 PF01168 Alanine racemase, N-terminal domain At12D13_23300 PF13603 Leucyl-tRNA synthetase, Domain 2 At12D13_23300 PF08264 Anticodon-binding domain of tRNA At12D13_23300 PF00133 tRNA synthetases class I (I, L, M and V) At12D13_23330 PF00037 4Fe-4S binding domain At12D13_23330 PF11953 Domain of unknown function (DUF3470) At12D13_23360 PF01494 FAD binding domain At12D13_23380 PF00543 Nitrogen regulatory protein P-II At12D13_23390 PF00909 Ammonium Transporter Family At12D13_23400 PF09397 Ftsk gamma domain At12D13_23400 PF13491 4TM region of DNA translocase FtsK/SpoIIIE At12D13_23400 PF01580 FtsK/SpoIIIE family At12D13_23400 PF17854 FtsK alpha domain At12D13_23410 PF03548 Outer membrane lipoprotein carrier protein LolA At12D13_23440 PF00486 Transcriptional regulatory protein, C terminal At12D13_23440 PF00072 Response regulator receiver domain At12D13_23460 PF02559 CarD-like/TRCF domain At12D13_23470 PF05088 Bacterial NAD-glutamate dehydrogenase At12D13_23480 PF11700 Vacuole effluxer Atg22 like At12D13_23490 PF05233 PHB accumulation regulatory domain At12D13_23490 PF07879 PHB/PHA accumulation regulator DNA-binding domain At12D13_23500 PF00108 Thiolase, N-terminal domain At12D13_23500 PF02803 Thiolase, C-terminal domain At12D13_23530 PF00210 Ferritin-like domain At12D13_23540 PF00293 NUDIX domain At12D13_23560 PF03572 Peptidase family S41 At12D13_23560 PF13180 PDZ domain At12D13_23580 PF02590 Predicted SPOUT methyltransferase At12D13_23600 PF01467 Cytidylyltransferase-like At12D13_23610 PF00171 Aldehyde dehydrogenase family At12D13_23620 PF00696 Amino acid kinase family At12D13_23620 PF01472 PUA domain At12D13_23630 PF01926 50S ribosome-binding GTPase At12D13_23630 PF01018 GTP1/OBG At12D13_23640 PF13302 Acetyltransferase (GNAT) domain At12D13_23660 PF01016 Ribosomal L27 protein At12D13_23670 PF00829 Ribosomal prokaryotic L21 protein At12D13_23700 PF03328 HpcH/HpaI aldolase/citrate lyase family At12D13_23720 PF00694 Aconitase C-terminal domain At12D13_23730 PF00180 Isocitrate/isopropylmalate dehydrogenase At12D13_23740 PF03150 Di-haem cytochrome c peroxidase At12D13_23750 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At12D13_23750 PF07685 CobB/CobQ-like glutamine amidotransferase domain At12D13_23760 PF14824 Sirohaem biosynthesis protein central At12D13_23760 PF10414 Sirohaem synthase dimerisation region At12D13_23760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_23770 PF01888 CbiD At12D13_23780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_23800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_23810 PF02571 Precorrin-6x reductase CbiJ/CobK At12D13_23820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_23830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_23840 PF02570 Precorrin-8X methylmutase At12D13_23850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain At12D13_23860 PF02514 CobN/Magnesium Chelatase At12D13_23870 PF07683 Cobalamin synthesis protein cobW C-terminal domain At12D13_23870 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_23890 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP At12D13_23900 PF07685 CobB/CobQ-like glutamine amidotransferase domain At12D13_23900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At12D13_23910 PF03186 CobD/Cbib protein At12D13_23920 PF00155 Aminotransferase class I and II At12D13_23930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_23930 PF13378 Enolase C-terminal domain-like At12D13_23940 PF05336 L-rhamnose mutarotase At12D13_23950 PF01232 Mannitol dehydrogenase Rossmann domain At12D13_23950 PF08125 Mannitol dehydrogenase C-terminal domain At12D13_23960 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_23960 PF00107 Zinc-binding dehydrogenase At12D13_23980 PF00248 Aldo/keto reductase family At12D13_24000 PF02653 Branched-chain amino acid transport system / permease component At12D13_24010 PF00005 ABC transporter At12D13_24020 PF07729 FCD domain At12D13_24020 PF00392 Bacterial regulatory proteins, gntR family At12D13_24030 PF08666 SAF domain At12D13_24030 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus At12D13_24040 PF01808 AICARFT/IMPCHase bienzyme At12D13_24040 PF02142 MGS-like domain At12D13_24060 PF01189 16S rRNA methyltransferase RsmB/F At12D13_24060 PF01029 NusB family At12D13_24070 PF01435 Peptidase family M48 At12D13_24090 PF02195 ParB-like nuclease domain At12D13_24090 PF17762 HTH domain found in ParB protein At12D13_24100 PF13614 AAA domain At12D13_24110 PF02527 rRNA small subunit methyltransferase G At12D13_24120 PF13932 GidA associated domain At12D13_24120 PF01134 Glucose inhibited division protein A At12D13_24130 PF10396 GTP-binding protein TrmE N-terminus At12D13_24130 PF01926 50S ribosome-binding GTPase At12D13_24130 PF12631 MnmE helical domain At12D13_24140 PF07497 Rho termination factor, RNA-binding domain At12D13_24140 PF07498 Rho termination factor, N-terminal domain At12D13_24140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At12D13_24160 PF01208 Uroporphyrinogen decarboxylase (URO-D) At12D13_24170 PF03618 Kinase/pyrophosphorylase At12D13_24180 PF02545 Maf-like protein At12D13_24190 PF01488 Shikimate / quinate 5-dehydrogenase At12D13_24190 PF08501 Shikimate dehydrogenase substrate binding domain At12D13_24190 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At12D13_24200 PF01121 Dephospho-CoA kinase At12D13_24210 PF00929 Exonuclease At12D13_24220 PF02556 Preprotein translocase subunit SecB At12D13_24230 PF04186 FxsA cytoplasmic membrane protein At12D13_24250 PF03562 MltA specific insert domain At12D13_24250 PF06725 3D domain At12D13_24280 PF00986 DNA gyrase B subunit, carboxyl terminus At12D13_24280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_24280 PF01751 Toprim domain At12D13_24280 PF00204 DNA gyrase B At12D13_24300 PF01557 Fumarylacetoacetate (FAA) hydrolase family At12D13_24330 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase At12D13_24340 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_24350 PF00290 Tryptophan synthase alpha chain At12D13_24360 PF01039 Carboxyl transferase domain At12D13_24370 PF08245 Mur ligase middle domain At12D13_24370 PF02875 Mur ligase family, glutamate ligase domain At12D13_24380 PF00085 Thioredoxin At12D13_24390 PF12705 PD-(D/E)XK nuclease superfamily At12D13_24390 PF13361 UvrD-like helicase C-terminal domain At12D13_24390 PF00580 UvrD/REP helicase N-terminal domain At12D13_24410 PF12804 MobA-like NTP transferase domain At12D13_24420 PF01636 Phosphotransferase enzyme family At12D13_24430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_24430 PF00512 His Kinase A (phospho-acceptor) domain At12D13_24440 PF05221 S-adenosyl-L-homocysteine hydrolase At12D13_24440 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain At12D13_24450 PF00381 PTS HPr component phosphorylation site At12D13_24460 PF03830 PTS system sorbose subfamily IIB component At12D13_24460 PF03610 PTS system fructose IIA component At12D13_24470 PF07475 HPr Serine kinase C-terminal domain At12D13_24470 PF02603 HPr Serine kinase N terminus At12D13_24480 PF00512 His Kinase A (phospho-acceptor) domain At12D13_24480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_24480 PF00672 HAMP domain At12D13_24480 PF13755 Sensor N-terminal transmembrane domain At12D13_24480 PF13756 Stimulus-sensing domain At12D13_24490 PF00072 Response regulator receiver domain At12D13_24490 PF00486 Transcriptional regulatory protein, C terminal At12D13_24500 PF01293 Phosphoenolpyruvate carboxykinase At12D13_24510 PF00472 RF-1 domain At12D13_24520 PF00485 Phosphoribulokinase / Uridine kinase family At12D13_24530 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase At12D13_24540 PF00977 Histidine biosynthesis protein At12D13_24550 PF00977 Histidine biosynthesis protein At12D13_24560 PF00117 Glutamine amidotransferase class-I At12D13_24580 PF00475 Imidazoleglycerol-phosphate dehydratase At12D13_24590 PF00227 Proteasome subunit At12D13_24600 PF07724 AAA domain (Cdc48 subfamily) At12D13_24600 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_24600 PF10431 C-terminal, D2-small domain, of ClpB protein At12D13_24620 PF01274 Malate synthase At12D13_24650 PF00072 Response regulator receiver domain At12D13_24660 PF00512 His Kinase A (phospho-acceptor) domain At12D13_24660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_24670 PF04408 Helicase associated domain (HA2) At12D13_24670 PF00270 DEAD/DEAH box helicase At12D13_24670 PF08482 ATP-dependent helicase C-terminal At12D13_24670 PF00271 Helicase conserved C-terminal domain At12D13_24710 PF00570 HRDC domain At12D13_24710 PF00270 DEAD/DEAH box helicase At12D13_24710 PF00271 Helicase conserved C-terminal domain At12D13_24710 PF16124 RecQ zinc-binding At12D13_24710 PF09382 RQC domain At12D13_24730 PF13407 Periplasmic binding protein domain At12D13_24740 PF02653 Branched-chain amino acid transport system / permease component At12D13_24750 PF00005 ABC transporter At12D13_24760 PF00485 Phosphoribulokinase / Uridine kinase family At12D13_24770 PF00462 Glutaredoxin At12D13_24780 PF07972 NrdI Flavodoxin like At12D13_24790 PF08343 Ribonucleotide reductase N-terminal At12D13_24790 PF00317 Ribonucleotide reductase, all-alpha domain At12D13_24790 PF02867 Ribonucleotide reductase, barrel domain At12D13_24800 PF00268 Ribonucleotide reductase, small chain At12D13_24820 PF02463 RecF/RecN/SMC N terminal domain At12D13_24830 PF00899 ThiF family At12D13_24830 PF00581 Rhodanese-like domain At12D13_24860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_24860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_24880 PF00294 pfkB family carbohydrate kinase At12D13_24900 PF05175 Methyltransferase small domain At12D13_24900 PF08468 Methyltransferase small domain N-terminal At12D13_24910 PF03725 3' exoribonuclease family, domain 2 At12D13_24910 PF01138 3' exoribonuclease family, domain 1 At12D13_24910 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain At12D13_24910 PF00013 KH domain At12D13_24910 PF00575 S1 RNA binding domain At12D13_24920 PF00312 Ribosomal protein S15 At12D13_24930 PF09157 Pseudouridine synthase II TruB, C-terminal At12D13_24930 PF16198 tRNA pseudouridylate synthase B C-terminal domain At12D13_24930 PF01509 TruB family pseudouridylate synthase (N terminal domain) At12D13_24940 PF02033 Ribosome-binding factor A At12D13_24950 PF03144 Elongation factor Tu domain 2 At12D13_24950 PF08364 Bacterial translation initiation factor IF-2 associated region At12D13_24950 PF04760 Translation initiation factor IF-2, N-terminal region At12D13_24950 PF00009 Elongation factor Tu GTP binding domain At12D13_24950 PF11987 Translation-initiation factor 2 At12D13_24970 PF13184 NusA-like KH domain At12D13_24970 PF08529 NusA N-terminal domain At12D13_24970 PF00575 S1 RNA binding domain At12D13_24980 PF02576 RimP N-terminal domain At12D13_24980 PF17384 RimP C-terminal SH3 domain At12D13_24990 PF05977 Transmembrane secretion effector At12D13_25000 PF13406 Transglycosylase SLT domain At12D13_25010 PF13662 Toprim domain At12D13_25010 PF02132 RecR protein At12D13_25030 PF02575 YbaB/EbfC DNA-binding family At12D13_25040 PF12169 DNA polymerase III subunits gamma and tau domain III At12D13_25040 PF12170 DNA polymerase III tau subunit V interacting with alpha At12D13_25040 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding At12D13_25060 PF00293 NUDIX domain At12D13_25060 PF09297 NADH pyrophosphatase zinc ribbon domain At12D13_25060 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain At12D13_25070 PF00800 Prephenate dehydratase At12D13_25070 PF01817 Chorismate mutase type II At12D13_25080 PF02348 Cytidylyltransferase At12D13_25090 PF00034 Cytochrome c At12D13_25110 PF02397 Bacterial sugar transferase At12D13_25120 PF00912 Transglycosylase At12D13_25120 PF00905 Penicillin binding protein transpeptidase domain At12D13_25130 PF04073 Aminoacyl-tRNA editing domain At12D13_25140 PF00313 'Cold-shock' DNA-binding domain At12D13_25150 PF07687 Peptidase dimerisation domain At12D13_25150 PF01546 Peptidase family M20/M25/M40 At12D13_25160 PF01047 MarR family At12D13_25170 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain At12D13_25170 PF00476 DNA polymerase family A At12D13_25170 PF01367 5'-3' exonuclease, C-terminal SAM fold At12D13_25170 PF01612 3'-5' exonuclease At12D13_25190 PF01783 Ribosomal L32p protein family At12D13_25200 PF00512 His Kinase A (phospho-acceptor) domain At12D13_25200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_25200 PF02743 Cache domain At12D13_25210 PF00072 Response regulator receiver domain At12D13_25210 PF02954 Bacterial regulatory protein, Fis family At12D13_25210 PF00158 Sigma-54 interaction domain At12D13_25220 PF03401 Tripartite tricarboxylate transporter family receptor At12D13_25230 PF07331 Tripartite tricarboxylate transporter TctB family At12D13_25240 PF01970 Tripartite tricarboxylate transporter TctA family At12D13_25250 PF04102 SlyX At12D13_25270 PF00684 DnaJ central domain At12D13_25270 PF00226 DnaJ domain At12D13_25270 PF01556 DnaJ C terminal domain At12D13_25280 PF00012 Hsp70 protein At12D13_25300 PF01625 Peptide methionine sulfoxide reductase At12D13_25350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region At12D13_25360 PF01048 Phosphorylase superfamily At12D13_25370 PF01791 DeoC/LacD family aldolase At12D13_25380 PF00591 Glycosyl transferase family, a/b domain At12D13_25380 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain At12D13_25380 PF02885 Glycosyl transferase family, helical bundle domain At12D13_25410 PF00962 Adenosine/AMP deaminase At12D13_25420 PF01676 Metalloenzyme superfamily At12D13_25440 PF03626 Prokaryotic Cytochrome C oxidase subunit IV At12D13_25450 PF00510 Cytochrome c oxidase subunit III At12D13_25460 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_25470 PF06481 COX Aromatic Rich Motif At12D13_25470 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At12D13_25480 PF07690 Major Facilitator Superfamily At12D13_25480 PF00083 Sugar (and other) transporter At12D13_25490 PF00310 Glutamine amidotransferases class-II At12D13_25490 PF01493 GXGXG motif At12D13_25490 PF04898 Glutamate synthase central domain At12D13_25490 PF01645 Conserved region in glutamate synthase At12D13_25500 PF00667 FAD binding domain At12D13_25500 PF00258 Flavodoxin At12D13_25500 PF00175 Oxidoreductase NAD-binding domain At12D13_25540 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_25540 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_25550 PF07977 FabA-like domain At12D13_25570 PF03458 UPF0126 domain At12D13_25590 PF06912 Protein of unknown function (DUF1275) At12D13_25610 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_25620 PF00005 ABC transporter At12D13_25630 PF07702 UTRA domain At12D13_25630 PF00392 Bacterial regulatory proteins, gntR family At12D13_25640 PF01618 MotA/TolQ/ExbB proton channel family At12D13_25650 PF02472 Biopolymer transport protein ExbD/TolR At12D13_25670 PF02615 Malate/L-lactate dehydrogenase At12D13_25700 PF00625 Guanylate kinase At12D13_25710 PF07969 Amidohydrolase family At12D13_25720 PF06299 Protein of unknown function (DUF1045) At12D13_25730 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_25740 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_25760 PF00005 ABC transporter At12D13_25780 PF00005 ABC transporter At12D13_25790 PF00005 ABC transporter At12D13_25800 PF06007 Phosphonate metabolism protein PhnJ At12D13_25820 PF05861 Bacterial phosphonate metabolism protein (PhnI) At12D13_25830 PF05845 Bacterial phosphonate metabolism protein (PhnH) At12D13_25840 PF06754 Phosphonate metabolism protein PhnG At12D13_25850 PF07702 UTRA domain At12D13_25850 PF00392 Bacterial regulatory proteins, gntR family At12D13_25860 PF05173 Dihydrodipicolinate reductase, C-terminus At12D13_25860 PF01113 Dihydrodipicolinate reductase, N-terminus At12D13_25870 PF02685 Glucokinase At12D13_25880 PF02142 MGS-like domain At12D13_25890 PF03411 Penicillin-insensitive murein endopeptidase At12D13_25900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_25910 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_25920 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_25920 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_25930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_25930 PF00005 ABC transporter At12D13_25940 PF01266 FAD dependent oxidoreductase At12D13_25950 PF00120 Glutamine synthetase, catalytic domain At12D13_25960 PF01266 FAD dependent oxidoreductase At12D13_25980 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_25990 PF00005 ABC transporter At12D13_26000 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_26010 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At12D13_26030 PF02082 Transcriptional regulator At12D13_26040 PF13416 Bacterial extracellular solute-binding protein At12D13_26070 PF00171 Aldehyde dehydrogenase family At12D13_26090 PF03466 LysR substrate binding domain At12D13_26090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_26100 PF00892 EamA-like transporter family At12D13_26130 PF00877 NlpC/P60 family At12D13_26150 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain At12D13_26150 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family At12D13_26160 PF02789 Cytosol aminopeptidase family, N-terminal domain At12D13_26160 PF00883 Cytosol aminopeptidase family, catalytic domain At12D13_26200 PF00437 Type II/IV secretion system protein At12D13_26230 PF04972 BON domain At12D13_26230 PF00263 Bacterial type II and III secretion system protein At12D13_26230 PF13629 Pilus formation protein N terminal region At12D13_26310 PF07411 Domain of unknown function (DUF1508) At12D13_26320 PF01183 Glycosyl hydrolases family 25 At12D13_26330 PF00892 EamA-like transporter family At12D13_26340 PF00155 Aminotransferase class I and II At12D13_26340 PF00392 Bacterial regulatory proteins, gntR family At12D13_26370 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_26370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At12D13_26400 PF06421 GTP-binding protein LepA C-terminus At12D13_26400 PF03144 Elongation factor Tu domain 2 At12D13_26400 PF00009 Elongation factor Tu GTP binding domain At12D13_26400 PF00679 Elongation factor G C-terminus At12D13_26410 PF00795 Carbon-nitrogen hydrolase At12D13_26470 PF02311 AraC-like ligand binding domain At12D13_26470 PF12833 Helix-turn-helix domain At12D13_26480 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_26530 PF00707 Translation initiation factor IF-3, C-terminal domain At12D13_26530 PF05198 Translation initiation factor IF-3, N-terminal domain At12D13_26540 PF01632 Ribosomal protein L35 At12D13_26550 PF00453 Ribosomal protein L20 At12D13_26570 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain At12D13_26570 PF01409 tRNA synthetases class II core domain (F) At12D13_26580 PF01588 Putative tRNA binding domain At12D13_26580 PF03147 Ferredoxin-fold anticodon binding domain At12D13_26580 PF03484 tRNA synthetase B5 domain At12D13_26580 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain At12D13_26580 PF03483 B3/4 domain At12D13_26590 PF00248 Aldo/keto reductase family At12D13_26600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_26600 PF03466 LysR substrate binding domain At12D13_26620 PF00248 Aldo/keto reductase family At12D13_26630 PF12833 Helix-turn-helix domain At12D13_26630 PF01965 DJ-1/PfpI family At12D13_26650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_26650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_26680 PF13742 OB-fold nucleic acid binding domain At12D13_26680 PF02601 Exonuclease VII, large subunit At12D13_26690 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_26690 PF13378 Enolase C-terminal domain-like At12D13_26700 PF00392 Bacterial regulatory proteins, gntR family At12D13_26700 PF07729 FCD domain At12D13_26710 PF01047 MarR family At12D13_26720 PF00892 EamA-like transporter family At12D13_26730 PF02073 Thermophilic metalloprotease (M29) At12D13_26740 PF04073 Aminoacyl-tRNA editing domain At12D13_26750 PF03960 ArsC family At12D13_26780 PF00440 Bacterial regulatory proteins, tetR family At12D13_26800 PF00117 Glutamine amidotransferase class-I At12D13_26800 PF00958 GMP synthase C terminal domain At12D13_26830 PF03073 TspO/MBR family At12D13_26880 PF01029 NusB family At12D13_26880 PF01189 16S rRNA methyltransferase RsmB/F At12D13_26890 PF03330 Lytic transglycolase At12D13_26910 PF08331 Domain of unknown function (DUF1730) At12D13_26920 PF00043 Glutathione S-transferase, C-terminal domain At12D13_26920 PF13417 Glutathione S-transferase, N-terminal domain At12D13_26930 PF02673 Bacitracin resistance protein BacA At12D13_26970 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family At12D13_26990 PF00398 Ribosomal RNA adenine dimethylase At12D13_27000 PF02768 DNA polymerase III beta subunit, C-terminal domain At12D13_27000 PF00712 DNA polymerase III beta subunit, N-terminal domain At12D13_27000 PF02767 DNA polymerase III beta subunit, central domain At12D13_27010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_27020 PF02021 Uncharacterised protein family UPF0102 At12D13_27030 PF14602 Hexapeptide repeat of succinyl-transferase At12D13_27030 PF12464 Maltose acetyltransferase At12D13_27040 PF13416 Bacterial extracellular solute-binding protein At12D13_27050 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_27060 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_27070 PF00005 ABC transporter At12D13_27090 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain At12D13_27090 PF02951 Prokaryotic glutathione synthetase, N-terminal domain At12D13_27100 PF01078 Magnesium chelatase, subunit ChlI At12D13_27100 PF13335 Magnesium chelatase, subunit ChlI C-terminal At12D13_27110 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_27120 PF01810 LysE type translocator At12D13_27130 PF00692 dUTPase At12D13_27140 PF03144 Elongation factor Tu domain 2 At12D13_27140 PF00009 Elongation factor Tu GTP binding domain At12D13_27140 PF16658 Class II release factor RF3, C-terminal domain At12D13_27150 PF02441 Flavoprotein At12D13_27150 PF04127 DNA / pantothenate metabolism flavoprotein At12D13_27180 PF03109 ABC1 family At12D13_27190 PF01209 ubiE/COQ5 methyltransferase family At12D13_27200 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain At12D13_27200 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain At12D13_27200 PF06827 Zinc finger found in FPG and IleRS At12D13_27210 PF00378 Enoyl-CoA hydratase/isomerase At12D13_27220 PF01649 Ribosomal protein S20 At12D13_27260 PF01757 Acyltransferase family At12D13_27340 PF00300 Histidine phosphatase superfamily (branch 1) At12D13_27370 PF00392 Bacterial regulatory proteins, gntR family At12D13_27370 PF07729 FCD domain At12D13_27380 PF00005 ABC transporter At12D13_27380 PF17912 MalK OB fold domain At12D13_27390 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_27400 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_27410 PF01547 Bacterial extracellular solute-binding protein At12D13_27450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_27450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_27470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_27470 PF13378 Enolase C-terminal domain-like At12D13_27500 PF00480 ROK family At12D13_27510 PF00196 Bacterial regulatory proteins, luxR family At12D13_27510 PF00072 Response regulator receiver domain At12D13_27520 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_27540 PF00005 ABC transporter At12D13_27540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_27570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_27600 PF01112 Asparaginase At12D13_27620 PF01266 FAD dependent oxidoreductase At12D13_27630 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_27630 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_27640 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_27650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_27660 PF01266 FAD dependent oxidoreductase At12D13_27670 PF00300 Histidine phosphatase superfamily (branch 1) At12D13_27670 PF00106 short chain dehydrogenase At12D13_27690 PF00005 ABC transporter At12D13_27690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_27720 PF03552 Cellulose synthase At12D13_27720 PF07238 PilZ domain At12D13_27720 PF00535 Glycosyl transferase family 2 At12D13_27740 PF00999 Sodium/hydrogen exchanger family At12D13_27750 PF06472 ABC transporter transmembrane region 2 At12D13_27750 PF00005 ABC transporter At12D13_27760 PF00990 Diguanylate cyclase, GGDEF domain At12D13_27760 PF08448 PAS fold At12D13_27770 PF00356 Bacterial regulatory proteins, lacI family At12D13_27790 PF00005 ABC transporter At12D13_27800 PF02653 Branched-chain amino acid transport system / permease component At12D13_27810 PF02126 Phosphotriesterase family At12D13_27830 PF00294 pfkB family carbohydrate kinase At12D13_27850 PF01546 Peptidase family M20/M25/M40 At12D13_27850 PF07687 Peptidase dimerisation domain At12D13_27870 PF00501 AMP-binding enzyme At12D13_27870 PF00975 Thioesterase domain At12D13_27870 PF13193 AMP-binding enzyme C-terminal domain At12D13_27870 PF00668 Condensation domain At12D13_27870 PF00550 Phosphopantetheine attachment site At12D13_27880 PF01177 Asp/Glu/Hydantoin racemase At12D13_27900 PF00440 Bacterial regulatory proteins, tetR family At12D13_27910 PF00860 Permease family At12D13_27920 PF00144 Beta-lactamase At12D13_27930 PF03466 LysR substrate binding domain At12D13_27930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_27990 PF04542 Sigma-70 region 2 At12D13_27990 PF08281 Sigma-70, region 4 At12D13_28000 PF01177 Asp/Glu/Hydantoin racemase At12D13_28010 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28020 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28040 PF08402 TOBE domain At12D13_28040 PF00005 ABC transporter At12D13_28090 PF13426 PAS domain At12D13_28090 PF08447 PAS fold At12D13_28090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_28110 PF13416 Bacterial extracellular solute-binding protein At12D13_28120 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28130 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28140 PF17912 MalK OB fold domain At12D13_28140 PF00005 ABC transporter At12D13_28150 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28160 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28180 PF00005 ABC transporter At12D13_28180 PF17912 MalK OB fold domain At12D13_28190 PF06964 Alpha-L-arabinofuranosidase C-terminal domain At12D13_28220 PF00356 Bacterial regulatory proteins, lacI family At12D13_28240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_28240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_28250 PF01261 Xylose isomerase-like TIM barrel At12D13_28260 PF00005 ABC transporter At12D13_28260 PF03459 TOBE domain At12D13_28260 PF17912 MalK OB fold domain At12D13_28270 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28280 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28290 PF13416 Bacterial extracellular solute-binding protein At12D13_28300 PF17938 Tetracyclin repressor-like, C-terminal domain At12D13_28300 PF00440 Bacterial regulatory proteins, tetR family At12D13_28310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_28310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_28340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_28340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_28370 PF00313 'Cold-shock' DNA-binding domain At12D13_28390 PF01165 Ribosomal protein S21 At12D13_28450 PF07470 Glycosyl Hydrolase Family 88 At12D13_28460 PF00295 Glycosyl hydrolases family 28 At12D13_28490 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28500 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28510 PF02311 AraC-like ligand binding domain At12D13_28510 PF12833 Helix-turn-helix domain At12D13_28520 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_28540 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_28550 PF04909 Amidohydrolase At12D13_28560 PF13378 Enolase C-terminal domain-like At12D13_28560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_28570 PF00701 Dihydrodipicolinate synthetase family At12D13_28590 PF04962 KduI/IolB family At12D13_28600 PF01370 NAD dependent epimerase/dehydratase family At12D13_28610 PF00392 Bacterial regulatory proteins, gntR family At12D13_28610 PF07729 FCD domain At12D13_28630 PF00557 Metallopeptidase family M24 At12D13_28630 PF01321 Creatinase/Prolidase N-terminal domain At12D13_28640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_28640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_28650 PF00005 ABC transporter At12D13_28650 PF17912 MalK OB fold domain At12D13_28660 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28670 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28680 PF13416 Bacterial extracellular solute-binding protein At12D13_28700 PF02311 AraC-like ligand binding domain At12D13_28700 PF12833 Helix-turn-helix domain At12D13_28710 PF07690 Major Facilitator Superfamily At12D13_28720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_28720 PF03466 LysR substrate binding domain At12D13_28730 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_28750 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_28760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At12D13_28760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At12D13_28790 PF00356 Bacterial regulatory proteins, lacI family At12D13_28800 PF16912 Glucose dehydrogenase C-terminus At12D13_28800 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_28830 PF00294 pfkB family carbohydrate kinase At12D13_28840 PF08013 Tagatose 6 phosphate kinase At12D13_28850 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28860 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28870 PF08402 TOBE domain At12D13_28870 PF00005 ABC transporter At12D13_28880 PF00005 ABC transporter At12D13_28880 PF17912 MalK OB fold domain At12D13_28890 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_28920 PF01053 Cys/Met metabolism PLP-dependent enzyme At12D13_28940 PF00075 RNase H At12D13_28950 PF01297 Zinc-uptake complex component A periplasmic At12D13_28960 PF00950 ABC 3 transport family At12D13_28970 PF00005 ABC transporter At12D13_28980 PF07683 Cobalamin synthesis protein cobW C-terminal domain At12D13_28980 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_29010 PF07683 Cobalamin synthesis protein cobW C-terminal domain At12D13_29010 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_29020 PF13416 Bacterial extracellular solute-binding protein At12D13_29030 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_29040 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_29050 PF08402 TOBE domain At12D13_29050 PF00005 ABC transporter At12D13_29080 PF03922 OmpW family At12D13_29120 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At12D13_29120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At12D13_29130 PF03466 LysR substrate binding domain At12D13_29130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_29140 PF13407 Periplasmic binding protein domain At12D13_29150 PF02653 Branched-chain amino acid transport system / permease component At12D13_29160 PF00005 ABC transporter At12D13_29170 PF00440 Bacterial regulatory proteins, tetR family At12D13_29170 PF08361 MAATS-type transcriptional repressor, C-terminal region At12D13_29180 PF00873 AcrB/AcrD/AcrF family At12D13_29190 PF00529 HlyD membrane-fusion protein of T1SS At12D13_29190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At12D13_29200 PF03707 Bacterial signalling protein N terminal repeat At12D13_29200 PF00563 EAL domain At12D13_29200 PF00990 Diguanylate cyclase, GGDEF domain At12D13_29210 PF05899 Protein of unknown function (DUF861) At12D13_29210 PF07883 Cupin domain At12D13_29230 PF00563 EAL domain At12D13_29230 PF08448 PAS fold At12D13_29230 PF08447 PAS fold At12D13_29230 PF00990 Diguanylate cyclase, GGDEF domain At12D13_29240 PF02615 Malate/L-lactate dehydrogenase At12D13_29250 PF17854 FtsK alpha domain At12D13_29250 PF09397 Ftsk gamma domain At12D13_29250 PF01580 FtsK/SpoIIIE family At12D13_29250 PF13491 4TM region of DNA translocase FtsK/SpoIIIE At12D13_29260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_29270 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_29280 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_29290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_29290 PF00005 ABC transporter At12D13_29300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_29300 PF00005 ABC transporter At12D13_29310 PF00266 Aminotransferase class-V At12D13_29330 PF00920 Dehydratase family At12D13_29340 PF13407 Periplasmic binding protein domain At12D13_29350 PF00005 ABC transporter At12D13_29360 PF02653 Branched-chain amino acid transport system / permease component At12D13_29370 PF02653 Branched-chain amino acid transport system / permease component At12D13_29380 PF07729 FCD domain At12D13_29380 PF00392 Bacterial regulatory proteins, gntR family At12D13_29400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At12D13_29400 PF07733 Bacterial DNA polymerase III alpha NTPase domain At12D13_29400 PF14579 Helix-hairpin-helix motif At12D13_29400 PF02811 PHP domain At12D13_29400 PF01336 OB-fold nucleic acid binding domain At12D13_29440 PF13660 Domain of unknown function (DUF4147) At12D13_29440 PF05161 MOFRL family At12D13_29460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_29460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_29480 PF00005 ABC transporter At12D13_29480 PF03459 TOBE domain At12D13_29480 PF17912 MalK OB fold domain At12D13_29490 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_29500 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_29510 PF01547 Bacterial extracellular solute-binding protein At12D13_29530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_29550 PF01425 Amidase At12D13_29560 PF00990 Diguanylate cyclase, GGDEF domain At12D13_29560 PF13188 PAS domain At12D13_29560 PF00563 EAL domain At12D13_29560 PF03707 Bacterial signalling protein N terminal repeat At12D13_29570 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_29590 PF03776 Septum formation topological specificity factor MinE At12D13_29600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At12D13_29610 PF03775 Septum formation inhibitor MinC, C-terminal domain At12D13_29610 PF05209 Septum formation inhibitor MinC, N-terminal domain At12D13_29620 PF13419 Haloacid dehalogenase-like hydrolase At12D13_29630 PF00392 Bacterial regulatory proteins, gntR family At12D13_29630 PF07729 FCD domain At12D13_29640 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_29660 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_29670 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_29670 PF00107 Zinc-binding dehydrogenase At12D13_29680 PF03786 D-mannonate dehydratase (UxuA) At12D13_29700 PF00171 Aldehyde dehydrogenase family At12D13_29710 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_29720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_29730 PF00005 ABC transporter At12D13_29730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_29740 PF03841 L-seryl-tRNA selenium transferase At12D13_29770 PF01979 Amidohydrolase family At12D13_29780 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_29780 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_29790 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_29800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_29810 PF13439 Glycosyltransferase Family 4 At12D13_29810 PF00534 Glycosyl transferases group 1 At12D13_29820 PF02563 Polysaccharide biosynthesis/export protein At12D13_29830 PF13533 Biotin-lipoyl like At12D13_29840 PF00873 AcrB/AcrD/AcrF family At12D13_29880 PF01613 Flavin reductase like domain At12D13_29890 PF00248 Aldo/keto reductase family At12D13_29900 PF00296 Luciferase-like monooxygenase At12D13_29920 PF08402 TOBE domain At12D13_29920 PF00005 ABC transporter At12D13_29930 PF01547 Bacterial extracellular solute-binding protein At12D13_29940 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_29950 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_29960 PF01055 Glycosyl hydrolases family 31 At12D13_29970 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_29980 PF09084 NMT1/THI5 like At12D13_29990 PF02110 Hydroxyethylthiazole kinase family At12D13_30000 PF02581 Thiamine monophosphate synthase At12D13_30010 PF08543 Phosphomethylpyrimidine kinase At12D13_30020 PF01037 Lrp/AsnC ligand binding domain At12D13_30030 PF00842 Alanine racemase, C-terminal domain At12D13_30030 PF01168 Alanine racemase, N-terminal domain At12D13_30040 PF01266 FAD dependent oxidoreductase At12D13_30070 PF00072 Response regulator receiver domain At12D13_30070 PF00158 Sigma-54 interaction domain At12D13_30070 PF02954 Bacterial regulatory protein, Fis family At12D13_30080 PF01270 Glycosyl hydrolases family 8 At12D13_30110 PF07238 PilZ domain At12D13_30110 PF03552 Cellulose synthase At12D13_30110 PF00535 Glycosyl transferase family 2 At12D13_30170 PF16363 GDP-mannose 4,6 dehydratase At12D13_30180 PF16363 GDP-mannose 4,6 dehydratase At12D13_30200 PF00072 Response regulator receiver domain At12D13_30200 PF00196 Bacterial regulatory proteins, luxR family At12D13_30230 PF00664 ABC transporter transmembrane region At12D13_30230 PF00005 ABC transporter At12D13_30240 PF00529 HlyD membrane-fusion protein of T1SS At12D13_30270 PF02563 Polysaccharide biosynthesis/export protein At12D13_30280 PF02397 Bacterial sugar transferase At12D13_30300 PF00202 Aminotransferase class-III At12D13_30310 PF00672 HAMP domain At12D13_30310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_30320 PF17969 L,D-transpeptidase C-terminal domain At12D13_30320 PF03734 L,D-transpeptidase catalytic domain At12D13_30320 PF01476 LysM domain At12D13_30360 PF02245 Methylpurine-DNA glycosylase (MPG) At12D13_30390 PF00356 Bacterial regulatory proteins, lacI family At12D13_30400 PF01547 Bacterial extracellular solute-binding protein At12D13_30410 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_30420 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_30430 PF03459 TOBE domain At12D13_30430 PF00005 ABC transporter At12D13_30430 PF17912 MalK OB fold domain At12D13_30450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_30450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_30460 PF04055 Radical SAM superfamily At12D13_30470 PF01242 6-pyruvoyl tetrahydropterin synthase At12D13_30480 PF06508 Queuosine biosynthesis protein QueC At12D13_30490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_30490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_30510 PF17912 MalK OB fold domain At12D13_30510 PF00005 ABC transporter At12D13_30520 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_30540 PF01547 Bacterial extracellular solute-binding protein At12D13_30550 PF01050 Mannose-6-phosphate isomerase At12D13_30550 PF00483 Nucleotidyl transferase At12D13_30560 PF01011 PQQ enzyme repeat At12D13_30570 PF03466 LysR substrate binding domain At12D13_30570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_30580 PF01515 Phosphate acetyl/butaryl transferase At12D13_30580 PF00390 Malic enzyme, N-terminal domain At12D13_30580 PF03949 Malic enzyme, NAD binding domain At12D13_30590 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_30600 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_30610 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_30620 PF00005 ABC transporter At12D13_30630 PF03972 MmgE/PrpD family At12D13_30650 PF08447 PAS fold At12D13_30650 PF13426 PAS domain At12D13_30650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_30660 PF01266 FAD dependent oxidoreductase At12D13_30690 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At12D13_30700 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_30710 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_30720 PF07722 Peptidase C26 At12D13_30730 PF02653 Branched-chain amino acid transport system / permease component At12D13_30740 PF00005 ABC transporter At12D13_30750 PF13407 Periplasmic binding protein domain At12D13_30760 PF01546 Peptidase family M20/M25/M40 At12D13_30770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_30790 PF00005 ABC transporter At12D13_30790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_30810 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_30820 PF03466 LysR substrate binding domain At12D13_30820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_30830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At12D13_30830 PF00529 HlyD membrane-fusion protein of T1SS At12D13_30840 PF00005 ABC transporter At12D13_30840 PF00664 ABC transporter transmembrane region At12D13_30880 PF08281 Sigma-70, region 4 At12D13_30880 PF04542 Sigma-70 region 2 At12D13_30880 PF12680 SnoaL-like domain At12D13_30890 PF00005 ABC transporter At12D13_30900 PF01032 FecCD transport family At12D13_30930 PF01209 ubiE/COQ5 methyltransferase family At12D13_30940 PF00127 Copper binding proteins, plastocyanin/azurin family At12D13_30950 PF00005 ABC transporter At12D13_30960 PF01032 FecCD transport family At12D13_30990 PF01546 Peptidase family M20/M25/M40 At12D13_30990 PF07687 Peptidase dimerisation domain At12D13_31000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_31020 PF00171 Aldehyde dehydrogenase family At12D13_31030 PF00180 Isocitrate/isopropylmalate dehydrogenase At12D13_31040 PF00171 Aldehyde dehydrogenase family At12D13_31050 PF01266 FAD dependent oxidoreductase At12D13_31080 PF00202 Aminotransferase class-III At12D13_31100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_31110 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_31120 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_31120 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_31130 PF00005 ABC transporter At12D13_31130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_31140 PF01037 Lrp/AsnC ligand binding domain At12D13_31150 PF01266 FAD dependent oxidoreductase At12D13_31180 PF00005 ABC transporter At12D13_31200 PF01546 Peptidase family M20/M25/M40 At12D13_31200 PF07687 Peptidase dimerisation domain At12D13_31210 PF00296 Luciferase-like monooxygenase At12D13_31220 PF00296 Luciferase-like monooxygenase At12D13_31230 PF02082 Transcriptional regulator At12D13_31250 PF01613 Flavin reductase like domain At12D13_31260 PF00296 Luciferase-like monooxygenase At12D13_31290 PF00296 Luciferase-like monooxygenase At12D13_31300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_31300 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_31300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_31320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_31330 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_31340 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_31350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_31350 PF00005 ABC transporter At12D13_31360 PF00005 ABC transporter At12D13_31360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_31370 PF00248 Aldo/keto reductase family At12D13_31380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_31380 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At12D13_31390 PF03466 LysR substrate binding domain At12D13_31390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_31430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_31440 PF07687 Peptidase dimerisation domain At12D13_31440 PF01546 Peptidase family M20/M25/M40 At12D13_31450 PF00296 Luciferase-like monooxygenase At12D13_31460 PF05368 NmrA-like family At12D13_31490 PF00296 Luciferase-like monooxygenase At12D13_31500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_31500 PF13378 Enolase C-terminal domain-like At12D13_31520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_31530 PF00005 ABC transporter At12D13_31530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_31540 PF00005 ABC transporter At12D13_31540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_31550 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_31550 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_31560 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_31580 PF00392 Bacterial regulatory proteins, gntR family At12D13_31580 PF07729 FCD domain At12D13_31600 PF00561 alpha/beta hydrolase fold At12D13_31630 PF00753 Metallo-beta-lactamase superfamily At12D13_31630 PF04273 Putative phosphatase (DUF442) At12D13_31650 PF04143 Sulphur transport At12D13_31670 PF01676 Metalloenzyme superfamily At12D13_31670 PF06415 BPG-independent PGAM N-terminus (iPGM_N) At12D13_31680 PF02817 e3 binding domain At12D13_31680 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At12D13_31680 PF00364 Biotin-requiring enzyme At12D13_31690 PF02779 Transketolase, pyrimidine binding domain At12D13_31690 PF02780 Transketolase, C-terminal domain At12D13_31700 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal At12D13_31700 PF00676 Dehydrogenase E1 component At12D13_31710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_31710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_31710 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_31720 PF00108 Thiolase, N-terminal domain At12D13_31720 PF02803 Thiolase, C-terminal domain At12D13_31730 PF01037 Lrp/AsnC ligand binding domain At12D13_31740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_31740 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_31740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_31750 PF01039 Carboxyl transferase domain At12D13_31760 PF00289 Biotin carboxylase, N-terminal domain At12D13_31760 PF00364 Biotin-requiring enzyme At12D13_31760 PF02785 Biotin carboxylase C-terminal domain At12D13_31760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_31770 PF00682 HMGL-like At12D13_31780 PF00378 Enoyl-CoA hydratase/isomerase At12D13_31790 PF02569 Pantoate-beta-alanine ligase At12D13_31800 PF02548 Ketopantoate hydroxymethyltransferase At12D13_31810 PF01261 Xylose isomerase-like TIM barrel At12D13_31820 PF00596 Class II Aldolase and Adducin N-terminal domain At12D13_31830 PF00455 DeoR C terminal sensor domain At12D13_31830 PF08220 DeoR-like helix-turn-helix domain At12D13_31840 PF13407 Periplasmic binding protein domain At12D13_31850 PF00005 ABC transporter At12D13_31860 PF02653 Branched-chain amino acid transport system / permease component At12D13_31870 PF02653 Branched-chain amino acid transport system / permease component At12D13_31880 PF05336 L-rhamnose mutarotase At12D13_31900 PF00561 alpha/beta hydrolase fold At12D13_31920 PF08447 PAS fold At12D13_31920 PF08448 PAS fold At12D13_31920 PF00563 EAL domain At12D13_31920 PF00990 Diguanylate cyclase, GGDEF domain At12D13_31940 PF00171 Aldehyde dehydrogenase family At12D13_31960 PF08713 DNA alkylation repair enzyme At12D13_31970 PF00005 ABC transporter At12D13_31980 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_31990 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_32040 PF08241 Methyltransferase domain At12D13_32060 PF00795 Carbon-nitrogen hydrolase At12D13_32070 PF00462 Glutaredoxin At12D13_32090 PF08241 Methyltransferase domain At12D13_32120 PF00293 NUDIX domain At12D13_32130 PF13508 Acetyltransferase (GNAT) domain At12D13_32130 PF00583 Acetyltransferase (GNAT) family At12D13_32140 PF01960 ArgJ family At12D13_32160 PF02810 SEC-C motif At12D13_32160 PF07517 SecA DEAD-like domain At12D13_32160 PF01043 SecA preprotein cross-linking domain At12D13_32160 PF07516 SecA Wing and Scaffold domain At12D13_32170 PF00892 EamA-like transporter family At12D13_32180 PF01757 Acyltransferase family At12D13_32230 PF00248 Aldo/keto reductase family At12D13_32240 PF03786 D-mannonate dehydratase (UxuA) At12D13_32250 PF01232 Mannitol dehydrogenase Rossmann domain At12D13_32250 PF08125 Mannitol dehydrogenase C-terminal domain At12D13_32260 PF00106 short chain dehydrogenase At12D13_32270 PF07729 FCD domain At12D13_32270 PF00392 Bacterial regulatory proteins, gntR family At12D13_32290 PF02653 Branched-chain amino acid transport system / permease component At12D13_32300 PF02653 Branched-chain amino acid transport system / permease component At12D13_32310 PF00005 ABC transporter At12D13_32360 PF00149 Calcineurin-like phosphoesterase At12D13_32370 PF02733 Dak1 domain At12D13_32370 PF02734 DAK2 domain At12D13_32380 PF02080 TrkA-C domain At12D13_32380 PF03600 Citrate transporter At12D13_32420 PF13439 Glycosyltransferase Family 4 At12D13_32440 PF01943 Polysaccharide biosynthesis protein At12D13_32460 PF13579 Glycosyl transferase 4-like domain At12D13_32460 PF00534 Glycosyl transferases group 1 At12D13_32500 PF02706 Chain length determinant protein At12D13_32500 PF13807 G-rich domain on putative tyrosine kinase At12D13_32500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At12D13_32540 PF00534 Glycosyl transferases group 1 At12D13_32540 PF13439 Glycosyltransferase Family 4 At12D13_32550 PF13439 Glycosyltransferase Family 4 At12D13_32550 PF00534 Glycosyl transferases group 1 At12D13_32580 PF01272 Transcription elongation factor, GreA/GreB, C-term At12D13_32580 PF03449 Transcription elongation factor, N-terminal At12D13_32590 PF00722 Glycosyl hydrolases family 16 At12D13_32590 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) At12D13_32650 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding At12D13_32680 PF01381 Helix-turn-helix At12D13_32700 PF00005 ABC transporter At12D13_32710 PF02653 Branched-chain amino acid transport system / permease component At12D13_32720 PF13407 Periplasmic binding protein domain At12D13_32740 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At12D13_32740 PF01266 FAD dependent oxidoreductase At12D13_32770 PF02785 Biotin carboxylase C-terminal domain At12D13_32770 PF00289 Biotin carboxylase, N-terminal domain At12D13_32770 PF00364 Biotin-requiring enzyme At12D13_32770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_32790 PF02798 Glutathione S-transferase, N-terminal domain At12D13_32800 PF01039 Carboxyl transferase domain At12D13_32810 PF01381 Helix-turn-helix At12D13_32810 PF06114 IrrE N-terminal-like domain At12D13_32810 PF09856 Predicted transcriptional regulator (DUF2083) At12D13_32820 PF12833 Helix-turn-helix domain At12D13_32820 PF00730 HhH-GPD superfamily base excision DNA repair protein At12D13_32820 PF06029 AlkA N-terminal domain At12D13_32820 PF02805 Metal binding domain of Ada At12D13_32830 PF00749 tRNA synthetases class I (E and Q), catalytic domain At12D13_32850 PF00106 short chain dehydrogenase At12D13_32870 PF01923 Cobalamin adenosyltransferase At12D13_32890 PF01012 Electron transfer flavoprotein domain At12D13_32900 PF00766 Electron transfer flavoprotein FAD-binding domain At12D13_32900 PF01012 Electron transfer flavoprotein domain At12D13_32910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain At12D13_32910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain At12D13_32920 PF08534 Redoxin At12D13_32930 PF00206 Lyase At12D13_32930 PF14698 Argininosuccinate lyase C-terminal At12D13_32950 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At12D13_32950 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At12D13_32970 PF00072 Response regulator receiver domain At12D13_32980 PF00156 Phosphoribosyl transferase domain At12D13_33000 PF00005 ABC transporter At12D13_33040 PF04752 ChaC-like protein At12D13_33070 PF02153 Prephenate dehydrogenase At12D13_33080 PF00155 Aminotransferase class I and II At12D13_33090 PF01209 ubiE/COQ5 methyltransferase family At12D13_33100 PF16123 Hydroxyacylglutathione hydrolase C-terminus At12D13_33100 PF00753 Metallo-beta-lactamase superfamily At12D13_33130 PF00830 Ribosomal L28 family At12D13_33140 PF02592 Putative vitamin uptake transporter At12D13_33160 PF11775 Cobalamin biosynthesis protein CobT VWA domain At12D13_33160 PF06213 Cobalamin biosynthesis protein CobT At12D13_33170 PF12556 Cobaltochelatase CobS subunit N terminal At12D13_33170 PF08406 CbbQ/NirQ/NorQ C-terminal At12D13_33170 PF07728 AAA domain (dynein-related subfamily) At12D13_33180 PF00226 DnaJ domain At12D13_33190 PF01722 BolA-like protein At12D13_33200 PF01761 3-dehydroquinate synthase At12D13_33210 PF01202 Shikimate kinase At12D13_33230 PF00589 Phage integrase family At12D13_33230 PF02899 Phage integrase, N-terminal SAM-like domain At12D13_33240 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit At12D13_33250 PF03734 L,D-transpeptidase catalytic domain At12D13_33260 PF01206 Sulfurtransferase TusA At12D13_33260 PF00581 Rhodanese-like domain At12D13_33280 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_33280 PF07683 Cobalamin synthesis protein cobW C-terminal domain At12D13_33290 PF07943 Penicillin-binding protein 5, C-terminal domain At12D13_33290 PF00768 D-alanyl-D-alanine carboxypeptidase At12D13_33300 PF07687 Peptidase dimerisation domain At12D13_33300 PF01546 Peptidase family M20/M25/M40 At12D13_33310 PF02082 Transcriptional regulator At12D13_33320 PF02261 Aspartate decarboxylase At12D13_33340 PF01554 MatE At12D13_33350 PF00668 Condensation domain At12D13_33350 PF00501 AMP-binding enzyme At12D13_33350 PF13193 AMP-binding enzyme C-terminal domain At12D13_33350 PF00550 Phosphopantetheine attachment site At12D13_33350 PF07993 Male sterility protein At12D13_33370 PF00550 Phosphopantetheine attachment site At12D13_33370 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_33370 PF00668 Condensation domain At12D13_33370 PF16197 Ketoacyl-synthetase C-terminal extension At12D13_33370 PF00698 Acyl transferase domain At12D13_33370 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_33380 PF00501 AMP-binding enzyme At12D13_33390 PF00550 Phosphopantetheine attachment site At12D13_33390 PF00668 Condensation domain At12D13_33390 PF13193 AMP-binding enzyme C-terminal domain At12D13_33390 PF00501 AMP-binding enzyme At12D13_33400 PF13649 Methyltransferase domain At12D13_33410 PF13193 AMP-binding enzyme C-terminal domain At12D13_33410 PF00668 Condensation domain At12D13_33410 PF16197 Ketoacyl-synthetase C-terminal extension At12D13_33410 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_33410 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_33410 PF00550 Phosphopantetheine attachment site At12D13_33410 PF00501 AMP-binding enzyme At12D13_33410 PF00202 Aminotransferase class-III At12D13_33450 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_33450 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_33450 PF00550 Phosphopantetheine attachment site At12D13_33450 PF00698 Acyl transferase domain At12D13_33450 PF00668 Condensation domain At12D13_33450 PF16197 Ketoacyl-synthetase C-terminal extension At12D13_33460 PF13193 AMP-binding enzyme C-terminal domain At12D13_33460 PF00501 AMP-binding enzyme At12D13_33460 PF00668 Condensation domain At12D13_33460 PF00550 Phosphopantetheine attachment site At12D13_33470 PF00668 Condensation domain At12D13_33470 PF00501 AMP-binding enzyme At12D13_33470 PF00550 Phosphopantetheine attachment site At12D13_33470 PF13193 AMP-binding enzyme C-terminal domain At12D13_33480 PF00668 Condensation domain At12D13_33480 PF13193 AMP-binding enzyme C-terminal domain At12D13_33480 PF00501 AMP-binding enzyme At12D13_33480 PF00550 Phosphopantetheine attachment site At12D13_33480 PF07993 Male sterility protein At12D13_33480 PF07993 Male sterility protein At12D13_33480 PF13193 AMP-binding enzyme C-terminal domain At12D13_33480 PF00550 Phosphopantetheine attachment site At12D13_33480 PF00501 AMP-binding enzyme At12D13_33480 PF00668 Condensation domain At12D13_33510 PF07715 TonB-dependent Receptor Plug Domain At12D13_33520 PF01497 Periplasmic binding protein At12D13_33530 PF01032 FecCD transport family At12D13_33540 PF01032 FecCD transport family At12D13_33550 PF00005 ABC transporter At12D13_33580 PF00912 Transglycosylase At12D13_33580 PF06832 Penicillin-Binding Protein C-terminus Family At12D13_33580 PF00905 Penicillin binding protein transpeptidase domain At12D13_33590 PF17962 Bacterial macroglobulin domain 6 At12D13_33590 PF07678 A-macroglobulin TED domain At12D13_33590 PF01835 MG2 domain At12D13_33590 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain At12D13_33590 PF11974 Bacterial alpha-2-macroglobulin MG3 domain At12D13_33590 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain At12D13_33590 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain At12D13_33590 PF07703 Alpha-2-macroglobulin bait region domain At12D13_33590 PF00207 Alpha-2-macroglobulin family At12D13_33600 PF03966 Trm112p-like protein At12D13_33620 PF00085 Thioredoxin At12D13_33640 PF02798 Glutathione S-transferase, N-terminal domain At12D13_33680 PF01842 ACT domain At12D13_33680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_33680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_33700 PF13505 Outer membrane protein beta-barrel domain At12D13_33710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At12D13_33710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At12D13_33710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At12D13_33710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At12D13_33720 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_33720 PF17862 AAA+ lid domain At12D13_33720 PF06480 FtsH Extracellular At12D13_33720 PF01434 Peptidase family M41 At12D13_33730 PF01171 PP-loop family At12D13_33750 PF00691 OmpA family At12D13_33760 PF04052 TolB amino-terminal domain At12D13_33760 PF07676 WD40-like Beta Propeller Repeat At12D13_33780 PF02472 Biopolymer transport protein ExbD/TolR At12D13_33790 PF01618 MotA/TolQ/ExbB proton channel family At12D13_33800 PF03061 Thioesterase superfamily At12D13_33810 PF00293 NUDIX domain At12D13_33820 PF00293 NUDIX domain At12D13_33850 PF17864 RuvB AAA lid domain At12D13_33850 PF05496 Holliday junction DNA helicase RuvB P-loop domain At12D13_33850 PF05491 RuvB C-terminal winged helix domain At12D13_33860 PF07499 RuvA, C-terminal domain At12D13_33860 PF01330 RuvA N terminal domain At12D13_33870 PF02075 Crossover junction endodeoxyribonuclease RuvC At12D13_33880 PF00672 HAMP domain At12D13_33880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_33890 PF00296 Luciferase-like monooxygenase At12D13_33900 PF01709 Transcriptional regulator At12D13_33930 PF13277 YmdB-like protein At12D13_33950 PF03471 Transporter associated domain At12D13_33950 PF01595 Cyclin M transmembrane N-terminal domain At12D13_33950 PF00571 CBS domain At12D13_33980 PF02780 Transketolase, C-terminal domain At12D13_33980 PF02779 Transketolase, pyrimidine binding domain At12D13_33980 PF00456 Transketolase, thiamine diphosphate binding domain At12D13_33990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain At12D13_33990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain At12D13_34000 PF03471 Transporter associated domain At12D13_34000 PF02080 TrkA-C domain At12D13_34000 PF00999 Sodium/hydrogen exchanger family At12D13_34010 PF00162 Phosphoglycerate kinase At12D13_34020 PF00274 Fructose-bisphosphate aldolase class-I At12D13_34070 PF01197 Ribosomal protein L31 At12D13_34090 PF00005 ABC transporter At12D13_34090 PF00664 ABC transporter transmembrane region At12D13_34100 PF00890 FAD binding domain At12D13_34120 PF01389 OmpA-like transmembrane domain At12D13_34120 PF00691 OmpA family At12D13_34140 PF00459 Inositol monophosphatase family At12D13_34200 PF00731 AIR carboxylase At12D13_34210 PF02222 ATP-grasp domain At12D13_34210 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain At12D13_34220 PF00444 Ribosomal protein L36 At12D13_34240 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) At12D13_34280 PF00224 Pyruvate kinase, barrel domain At12D13_34280 PF02887 Pyruvate kinase, alpha/beta domain At12D13_34290 PF05951 Bacterial protein of unknown function (DUF882) At12D13_34300 PF02954 Bacterial regulatory protein, Fis family At12D13_34300 PF00072 Response regulator receiver domain At12D13_34300 PF00158 Sigma-54 interaction domain At12D13_34310 PF01432 Peptidase family M3 At12D13_34310 PF08439 Oligopeptidase F At12D13_34320 PF01063 Amino-transferase class IV At12D13_34330 PF17151 Periplasmic sensor domain At12D13_34330 PF00990 Diguanylate cyclase, GGDEF domain At12D13_34340 PF03435 Saccharopine dehydrogenase NADP binding domain At12D13_34340 PF16653 Saccharopine dehydrogenase C-terminal domain At12D13_34360 PF02872 5'-nucleotidase, C-terminal domain At12D13_34360 PF00149 Calcineurin-like phosphoesterase At12D13_34370 PF00762 Ferrochelatase At12D13_34380 PF01145 SPFH domain / Band 7 family At12D13_34380 PF16200 C-terminal region of band_7 At12D13_34400 PF00571 CBS domain At12D13_34400 PF01380 SIS domain At12D13_34430 PF00483 Nucleotidyl transferase At12D13_34440 PF13406 Transglycosylase SLT domain At12D13_34460 PF00486 Transcriptional regulatory protein, C terminal At12D13_34460 PF00072 Response regulator receiver domain At12D13_34470 PF00672 HAMP domain At12D13_34470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_34470 PF00512 His Kinase A (phospho-acceptor) domain At12D13_34480 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_34480 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster At12D13_34490 PF00310 Glutamine amidotransferases class-II At12D13_34490 PF04898 Glutamate synthase central domain At12D13_34490 PF01645 Conserved region in glutamate synthase At12D13_34490 PF01493 GXGXG motif At12D13_34500 PF01212 Beta-eliminating lyase At12D13_34510 PF00072 Response regulator receiver domain At12D13_34510 PF00486 Transcriptional regulatory protein, C terminal At12D13_34520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_34520 PF00512 His Kinase A (phospho-acceptor) domain At12D13_34520 PF02702 Osmosensitive K+ channel His kinase sensor domain At12D13_34520 PF13492 GAF domain At12D13_34520 PF13493 Domain of unknown function (DUF4118) At12D13_34530 PF02669 K+-transporting ATPase, c chain At12D13_34560 PF03814 Potassium-transporting ATPase A subunit At12D13_34580 PF00710 Asparaginase, N-terminal At12D13_34580 PF17763 Glutaminase/Asparaginase C-terminal domain At12D13_34590 PF00324 Amino acid permease At12D13_34600 PF10415 Fumarase C C-terminus At12D13_34600 PF00206 Lyase At12D13_34610 PF07729 FCD domain At12D13_34610 PF00392 Bacterial regulatory proteins, gntR family At12D13_34620 PF00873 AcrB/AcrD/AcrF family At12D13_34640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At12D13_34640 PF00529 HlyD membrane-fusion protein of T1SS At12D13_34660 PF00392 Bacterial regulatory proteins, gntR family At12D13_34660 PF07702 UTRA domain At12D13_34690 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_34700 PF00571 CBS domain At12D13_34700 PF00005 ABC transporter At12D13_34710 PF00221 Aromatic amino acid lyase At12D13_34720 PF07690 Major Facilitator Superfamily At12D13_34740 PF01053 Cys/Met metabolism PLP-dependent enzyme At12D13_34750 PF01037 Lrp/AsnC ligand binding domain At12D13_34760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_34760 PF03466 LysR substrate binding domain At12D13_34770 PF00248 Aldo/keto reductase family At12D13_34780 PF03466 LysR substrate binding domain At12D13_34780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_34790 PF00857 Isochorismatase family At12D13_34820 PF05336 L-rhamnose mutarotase At12D13_34830 PF07729 FCD domain At12D13_34830 PF00392 Bacterial regulatory proteins, gntR family At12D13_34840 PF00248 Aldo/keto reductase family At12D13_34850 PF08666 SAF domain At12D13_34850 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus At12D13_34860 PF00005 ABC transporter At12D13_34870 PF02653 Branched-chain amino acid transport system / permease component At12D13_34880 PF02653 Branched-chain amino acid transport system / permease component At12D13_34890 PF13407 Periplasmic binding protein domain At12D13_34910 PF01717 Cobalamin-independent synthase, Catalytic domain At12D13_34910 PF08267 Cobalamin-independent synthase, N-terminal domain At12D13_34940 PF03466 LysR substrate binding domain At12D13_34940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_35000 PF03061 Thioesterase superfamily At12D13_35040 PF04168 A predicted alpha-helical domain with a conserved ER motif. At12D13_35040 PF14403 Circularly permuted ATP-grasp type 2 At12D13_35050 PF01841 Transglutaminase-like superfamily At12D13_35050 PF08379 Bacterial transglutaminase-like N-terminal region At12D13_35070 PF12848 ABC transporter At12D13_35070 PF00005 ABC transporter At12D13_35080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_35080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_35090 PF01070 FMN-dependent dehydrogenase At12D13_35110 PF01047 MarR family At12D13_35130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At12D13_35130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At12D13_35140 PF01791 DeoC/LacD family aldolase At12D13_35150 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At12D13_35150 PF01266 FAD dependent oxidoreductase At12D13_35160 PF00248 Aldo/keto reductase family At12D13_35180 PF02653 Branched-chain amino acid transport system / permease component At12D13_35190 PF00005 ABC transporter At12D13_35210 PF00072 Response regulator receiver domain At12D13_35230 PF00459 Inositol monophosphatase family At12D13_35250 PF00011 Hsp20/alpha crystallin family At12D13_35260 PF13593 SBF-like CPA transporter family (DUF4137) At12D13_35270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_35270 PF03466 LysR substrate binding domain At12D13_35280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At12D13_35280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At12D13_35310 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_35320 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_35330 PF00005 ABC transporter At12D13_35330 PF17912 MalK OB fold domain At12D13_35340 PF17912 MalK OB fold domain At12D13_35340 PF00005 ABC transporter At12D13_35340 PF03459 TOBE domain At12D13_35350 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At12D13_35350 PF01266 FAD dependent oxidoreductase At12D13_35360 PF08220 DeoR-like helix-turn-helix domain At12D13_35360 PF00455 DeoR C terminal sensor domain At12D13_35370 PF10414 Sirohaem synthase dimerisation region At12D13_35370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_35370 PF14824 Sirohaem biosynthesis protein central At12D13_35380 PF00384 Molybdopterin oxidoreductase At12D13_35380 PF04324 BFD-like [2Fe-2S] binding domain At12D13_35380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At12D13_35380 PF01568 Molydopterin dinucleotide binding domain At12D13_35410 PF04324 BFD-like [2Fe-2S] binding domain At12D13_35410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain At12D13_35410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain At12D13_35410 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_35410 PF18267 Rubredoxin NAD+ reductase C-terminal domain At12D13_35420 PF00005 ABC transporter At12D13_35430 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_35460 PF08376 Nitrate and nitrite sensing At12D13_35460 PF03861 ANTAR domain At12D13_35470 PF00392 Bacterial regulatory proteins, gntR family At12D13_35470 PF07729 FCD domain At12D13_35480 PF01566 Natural resistance-associated macrophage protein At12D13_35490 PF03746 LamB/YcsF family At12D13_35500 PF07286 Protein of unknown function (DUF1445) At12D13_35510 PF02626 Carboxyltransferase domain, subdomain A and B At12D13_35520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_35520 PF02785 Biotin carboxylase C-terminal domain At12D13_35520 PF00289 Biotin carboxylase, N-terminal domain At12D13_35520 PF00364 Biotin-requiring enzyme At12D13_35530 PF02806 Alpha amylase, C-terminal all-beta domain At12D13_35530 PF00128 Alpha amylase, catalytic domain At12D13_35540 PF00376 MerR family regulatory protein At12D13_35540 PF09278 MerR, DNA binding At12D13_35550 PF07715 TonB-dependent Receptor Plug Domain At12D13_35550 PF00593 TonB dependent receptor At12D13_35560 PF00591 Glycosyl transferase family, a/b domain At12D13_35560 PF02885 Glycosyl transferase family, helical bundle domain At12D13_35570 PF06772 Bacterial low temperature requirement A protein (LtrA) At12D13_35600 PF11800 Replication protein C C-terminal region At12D13_35600 PF03428 Replication protein C N-terminal domain At12D13_35610 PF07506 RepB plasmid partitioning protein At12D13_35610 PF02195 ParB-like nuclease domain At12D13_35620 PF13614 AAA domain At12D13_35640 PF01042 Endoribonuclease L-PSP At12D13_35650 PF14031 Putative serine dehydratase domain At12D13_35650 PF01168 Alanine racemase, N-terminal domain At12D13_35660 PF07171 MlrC C-terminus At12D13_35660 PF07364 Metallopeptidase family M81 At12D13_35670 PF05962 HutD At12D13_35690 PF17391 Urocanase N-terminal domain At12D13_35690 PF17392 Urocanase C-terminal domain At12D13_35690 PF01175 Urocanase Rossmann-like domain At12D13_35720 PF00221 Aromatic amino acid lyase At12D13_35730 PF01979 Amidohydrolase family At12D13_35740 PF01979 Amidohydrolase family At12D13_35800 PF01266 FAD dependent oxidoreductase At12D13_35810 PF14031 Putative serine dehydratase domain At12D13_35810 PF01168 Alanine racemase, N-terminal domain At12D13_35820 PF02423 Ornithine cyclodeaminase/mu-crystallin family At12D13_35830 PF00171 Aldehyde dehydrogenase family At12D13_35840 PF03466 LysR substrate binding domain At12D13_35840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_35850 PF01266 FAD dependent oxidoreductase At12D13_35860 PF05544 Proline racemase At12D13_35870 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_35880 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_35890 PF00571 CBS domain At12D13_35890 PF00005 ABC transporter At12D13_35910 PF01266 FAD dependent oxidoreductase At12D13_35920 PF00171 Aldehyde dehydrogenase family At12D13_35930 PF00701 Dihydrodipicolinate synthetase family At12D13_35970 PF00392 Bacterial regulatory proteins, gntR family At12D13_35970 PF07729 FCD domain At12D13_35980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_35980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_35990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_35990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_36000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_36000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_36020 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_36030 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_36040 PF03459 TOBE domain At12D13_36040 PF17912 MalK OB fold domain At12D13_36040 PF00005 ABC transporter At12D13_36050 PF00920 Dehydratase family At12D13_36060 PF01370 NAD dependent epimerase/dehydratase family At12D13_36070 PF03737 Aldolase/RraA At12D13_36090 PF03275 UDP-galactopyranose mutase At12D13_36120 PF03466 LysR substrate binding domain At12D13_36120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_36130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_36160 PF07969 Amidohydrolase family At12D13_36180 PF05977 Transmembrane secretion effector At12D13_36210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_36210 PF03466 LysR substrate binding domain At12D13_36220 PF07690 Major Facilitator Superfamily At12D13_36310 PF13673 Acetyltransferase (GNAT) domain At12D13_36320 PF04055 Radical SAM superfamily At12D13_36320 PF06968 Biotin and Thiamin Synthesis associated domain At12D13_36330 PF00155 Aminotransferase class I and II At12D13_36350 PF00202 Aminotransferase class-III At12D13_36360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal At12D13_36360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III At12D13_36410 PF00491 Arginase family At12D13_36420 PF02423 Ornithine cyclodeaminase/mu-crystallin family At12D13_36430 PF00892 EamA-like transporter family At12D13_36440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_36440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_36450 PF00211 Adenylate and Guanylate cyclase catalytic domain At12D13_36470 PF07756 Protein of unknown function (DUF1612) At12D13_36470 PF11972 HTH DNA binding domain At12D13_36480 PF00083 Sugar (and other) transporter At12D13_36490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_36490 PF00512 His Kinase A (phospho-acceptor) domain At12D13_36500 PF00486 Transcriptional regulatory protein, C terminal At12D13_36500 PF00072 Response regulator receiver domain At12D13_36510 PF08019 Phosphoethanolamine transferase EptA/EptB At12D13_36510 PF00884 Sulfatase At12D13_36530 PF03466 LysR substrate binding domain At12D13_36530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_36540 PF07715 TonB-dependent Receptor Plug Domain At12D13_36540 PF00593 TonB dependent receptor At12D13_36560 PF01032 FecCD transport family At12D13_36570 PF00005 ABC transporter At12D13_36590 PF00034 Cytochrome c At12D13_36600 PF02631 RecX family At12D13_36610 PF08450 SMP-30/Gluconolactonase/LRE-like region At12D13_36630 PF02653 Branched-chain amino acid transport system / permease component At12D13_36640 PF00005 ABC transporter At12D13_36650 PF13407 Periplasmic binding protein domain At12D13_36660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_36660 PF07730 Histidine kinase At12D13_36670 PF00196 Bacterial regulatory proteins, luxR family At12D13_36670 PF00072 Response regulator receiver domain At12D13_36690 PF07995 Glucose / Sorbosone dehydrogenase At12D13_36710 PF04445 Putative SAM-dependent methyltransferase At12D13_36720 PF00849 RNA pseudouridylate synthase At12D13_36730 PF01205 Uncharacterized protein family UPF0029 At12D13_36740 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At12D13_36740 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_36750 PF00571 CBS domain At12D13_36750 PF00005 ABC transporter At12D13_36760 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_36780 PF00072 Response regulator receiver domain At12D13_36780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_36780 PF13426 PAS domain At12D13_36790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_36800 PF02706 Chain length determinant protein At12D13_36800 PF13807 G-rich domain on putative tyrosine kinase At12D13_36800 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At12D13_36810 PF00483 Nucleotidyl transferase At12D13_36820 PF00535 Glycosyl transferase family 2 At12D13_36830 PF00535 Glycosyl transferase family 2 At12D13_36840 PF00535 Glycosyl transferase family 2 At12D13_36860 PF00722 Glycosyl hydrolases family 16 At12D13_36870 PF01757 Acyltransferase family At12D13_36880 PF01943 Polysaccharide biosynthesis protein At12D13_36890 PF00535 Glycosyl transferase family 2 At12D13_36900 PF04230 Polysaccharide pyruvyl transferase At12D13_36910 PF00535 Glycosyl transferase family 2 At12D13_36920 PF11089 Exopolysaccharide production repressor At12D13_36950 PF01165 Ribosomal protein S21 At12D13_36960 PF01266 FAD dependent oxidoreductase At12D13_36990 PF01571 Aminomethyltransferase folate-binding domain At12D13_36990 PF08669 Glycine cleavage T-protein C-terminal barrel domain At12D13_36990 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_36990 PF17806 Sarcosine oxidase A3 domain At12D13_37020 PF01575 MaoC like domain At12D13_37030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At12D13_37030 PF18390 Glycogen debranching enzyme C-terminal domain At12D13_37030 PF00128 Alpha amylase, catalytic domain At12D13_37040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At12D13_37040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At12D13_37040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At12D13_37040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At12D13_37050 PF00534 Glycosyl transferases group 1 At12D13_37050 PF08323 Starch synthase catalytic domain At12D13_37060 PF00483 Nucleotidyl transferase At12D13_37070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At12D13_37070 PF02806 Alpha amylase, C-terminal all-beta domain At12D13_37070 PF00128 Alpha amylase, catalytic domain At12D13_37080 PF00343 Carbohydrate phosphorylase At12D13_37100 PF01177 Asp/Glu/Hydantoin racemase At12D13_37110 PF01037 Lrp/AsnC ligand binding domain At12D13_37130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At12D13_37130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At12D13_37150 PF00107 Zinc-binding dehydrogenase At12D13_37150 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_37170 PF00005 ABC transporter At12D13_37170 PF00664 ABC transporter transmembrane region At12D13_37180 PF00664 ABC transporter transmembrane region At12D13_37180 PF00005 ABC transporter At12D13_37190 PF01654 Cytochrome bd terminal oxidase subunit I At12D13_37200 PF02322 Cytochrome bd terminal oxidase subunit II At12D13_37210 PF08173 Membrane bound YbgT-like protein At12D13_37250 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain At12D13_37250 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain At12D13_37260 PF00890 FAD binding domain At12D13_37260 PF02910 Fumarate reductase flavoprotein C-term At12D13_37270 PF02445 Quinolinate synthetase A protein At12D13_37320 PF02224 Cytidylate kinase At12D13_37330 PF00575 S1 RNA binding domain At12D13_37390 PF00106 short chain dehydrogenase At12D13_37400 PF00557 Metallopeptidase family M24 At12D13_37400 PF01321 Creatinase/Prolidase N-terminal domain At12D13_37410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_37420 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_37430 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_37430 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_37440 PF00005 ABC transporter At12D13_37440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_37450 PF00005 ABC transporter At12D13_37450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_37460 PF07729 FCD domain At12D13_37460 PF00392 Bacterial regulatory proteins, gntR family At12D13_37470 PF13378 Enolase C-terminal domain-like At12D13_37470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_37480 PF00296 Luciferase-like monooxygenase At12D13_37510 PF00005 ABC transporter At12D13_37510 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_37520 PF00005 ABC transporter At12D13_37530 PF02653 Branched-chain amino acid transport system / permease component At12D13_37540 PF02653 Branched-chain amino acid transport system / permease component At12D13_37540 PF11862 Domain of unknown function (DUF3382) At12D13_37550 PF05199 GMC oxidoreductase At12D13_37550 PF00732 GMC oxidoreductase At12D13_37560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At12D13_37560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At12D13_37570 PF13193 AMP-binding enzyme C-terminal domain At12D13_37570 PF00501 AMP-binding enzyme At12D13_37620 PF01011 PQQ enzyme repeat At12D13_37630 PF05974 Domain of unknown function (DUF892) At12D13_37650 PF03275 UDP-galactopyranose mutase At12D13_37690 PF01965 DJ-1/PfpI family At12D13_37740 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain At12D13_37740 PF02951 Prokaryotic glutathione synthetase, N-terminal domain At12D13_37750 PF16363 GDP-mannose 4,6 dehydratase At12D13_37760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain At12D13_37760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain At12D13_37760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain At12D13_37780 PF03466 LysR substrate binding domain At12D13_37780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_37790 PF00171 Aldehyde dehydrogenase family At12D13_37800 PF09084 NMT1/THI5 like At12D13_37810 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_37820 PF00005 ABC transporter At12D13_37830 PF00171 Aldehyde dehydrogenase family At12D13_37830 PF14850 DNA-binding domain of Proline dehydrogenase At12D13_37830 PF18327 Proline utilization A proline dehydrogenase N-terminal domain At12D13_37830 PF01619 Proline dehydrogenase At12D13_37840 PF01037 Lrp/AsnC ligand binding domain At12D13_37850 PF08281 Sigma-70, region 4 At12D13_37850 PF04542 Sigma-70 region 2 At12D13_37870 PF00072 Response regulator receiver domain At12D13_37880 PF13426 PAS domain At12D13_37880 PF07536 HWE histidine kinase At12D13_37880 PF08447 PAS fold At12D13_37890 PF13581 Histidine kinase-like ATPase domain At12D13_37890 PF13426 PAS domain At12D13_37890 PF07536 HWE histidine kinase At12D13_37910 PF16363 GDP-mannose 4,6 dehydratase At12D13_37940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At12D13_37950 PF03435 Saccharopine dehydrogenase NADP binding domain At12D13_37950 PF16653 Saccharopine dehydrogenase C-terminal domain At12D13_37960 PF00270 DEAD/DEAH box helicase At12D13_37960 PF00271 Helicase conserved C-terminal domain At12D13_37970 PF00696 Amino acid kinase family At12D13_37970 PF01842 ACT domain At12D13_37970 PF13840 ACT domain At12D13_37980 PF00391 PEP-utilising enzyme, mobile domain At12D13_37980 PF01590 GAF domain At12D13_37980 PF05524 PEP-utilising enzyme, N-terminal At12D13_37980 PF02896 PEP-utilising enzyme, TIM barrel domain At12D13_37990 PF00472 RF-1 domain At12D13_37990 PF03462 PCRF domain At12D13_38000 PF17827 PrmC N-terminal domain At12D13_38000 PF05175 Methyltransferase small domain At12D13_38020 PF17871 AAA lid domain At12D13_38020 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_38020 PF07724 AAA domain (Cdc48 subfamily) At12D13_38020 PF02861 Clp amino terminal domain, pathogenicity island component At12D13_38020 PF10431 C-terminal, D2-small domain, of ClpB protein At12D13_38030 PF01551 Peptidase family M23 At12D13_38030 PF10145 Phage-related minor tail protein At12D13_38030 PF01464 Transglycosylase SLT domain At12D13_38070 PF00701 Dihydrodipicolinate synthetase family At12D13_38080 PF08450 SMP-30/Gluconolactonase/LRE-like region At12D13_38090 PF07729 FCD domain At12D13_38090 PF00392 Bacterial regulatory proteins, gntR family At12D13_38100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_38110 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_38120 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_38120 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_38130 PF00005 ABC transporter At12D13_38130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_38140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_38140 PF13378 Enolase C-terminal domain-like At12D13_38170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_38170 PF03466 LysR substrate binding domain At12D13_38180 PF03746 LamB/YcsF family At12D13_38190 PF00364 Biotin-requiring enzyme At12D13_38200 PF00289 Biotin carboxylase, N-terminal domain At12D13_38200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_38200 PF02785 Biotin carboxylase C-terminal domain At12D13_38220 PF02626 Carboxyltransferase domain, subdomain A and B At12D13_38240 PF00005 ABC transporter At12D13_38240 PF08402 TOBE domain At12D13_38250 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_38300 PF00005 ABC transporter At12D13_38300 PF08402 TOBE domain At12D13_38310 PF01522 Polysaccharide deacetylase At12D13_38330 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_38330 PF07683 Cobalamin synthesis protein cobW C-terminal domain At12D13_38350 PF01425 Amidase At12D13_38380 PF03358 NADPH-dependent FMN reductase At12D13_38390 PF13649 Methyltransferase domain At12D13_38400 PF01161 Phosphatidylethanolamine-binding protein At12D13_38420 PF02909 Tetracyclin repressor-like, C-terminal domain At12D13_38420 PF00440 Bacterial regulatory proteins, tetR family At12D13_38430 PF07690 Major Facilitator Superfamily At12D13_38450 PF00313 'Cold-shock' DNA-binding domain At12D13_38460 PF12327 FtsZ family, C-terminal domain At12D13_38460 PF00091 Tubulin/FtsZ family, GTPase domain At12D13_38470 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_38470 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_38500 PF00873 AcrB/AcrD/AcrF family At12D13_38510 PF00106 short chain dehydrogenase At12D13_38530 PF08669 Glycine cleavage T-protein C-terminal barrel domain At12D13_38530 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_38530 PF17806 Sarcosine oxidase A3 domain At12D13_38530 PF01571 Aminomethyltransferase folate-binding domain At12D13_38540 PF04267 Sarcosine oxidase, delta subunit family At12D13_38550 PF01266 FAD dependent oxidoreductase At12D13_38560 PF12833 Helix-turn-helix domain At12D13_38560 PF01965 DJ-1/PfpI family At12D13_38590 PF01493 GXGXG motif At12D13_38600 PF01645 Conserved region in glutamate synthase At12D13_38610 PF00120 Glutamine synthetase, catalytic domain At12D13_38620 PF00551 Formyl transferase At12D13_38630 PF07729 FCD domain At12D13_38630 PF00392 Bacterial regulatory proteins, gntR family At12D13_38660 PF00005 ABC transporter At12D13_38670 PF00465 Iron-containing alcohol dehydrogenase At12D13_38690 PF12697 Alpha/beta hydrolase family At12D13_38700 PF01613 Flavin reductase like domain At12D13_38710 PF00296 Luciferase-like monooxygenase At12D13_38720 PF00171 Aldehyde dehydrogenase family At12D13_38750 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_38760 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_38770 PF08402 TOBE domain At12D13_38770 PF00005 ABC transporter At12D13_38780 PF00171 Aldehyde dehydrogenase family At12D13_38800 PF00005 ABC transporter At12D13_38800 PF17912 MalK OB fold domain At12D13_38800 PF03459 TOBE domain At12D13_38810 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_38840 PF04205 FMN-binding domain At12D13_38840 PF00890 FAD binding domain At12D13_38850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family At12D13_38850 PF00356 Bacterial regulatory proteins, lacI family At12D13_38860 PF00005 ABC transporter At12D13_38860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_38870 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_38870 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_38880 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_38890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_38900 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_38910 PF00005 ABC transporter At12D13_38930 PF04303 PrpF protein At12D13_38940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_38940 PF03466 LysR substrate binding domain At12D13_38960 PF00392 Bacterial regulatory proteins, gntR family At12D13_38960 PF00155 Aminotransferase class I and II At12D13_38980 PF01810 LysE type translocator At12D13_38990 PF02567 Phenazine biosynthesis-like protein At12D13_39000 PF00293 NUDIX domain At12D13_39010 PF03466 LysR substrate binding domain At12D13_39010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_39030 PF00364 Biotin-requiring enzyme At12D13_39040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_39040 PF00289 Biotin carboxylase, N-terminal domain At12D13_39040 PF02785 Biotin carboxylase C-terminal domain At12D13_39070 PF02626 Carboxyltransferase domain, subdomain A and B At12D13_39080 PF03746 LamB/YcsF family At12D13_39100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_39100 PF03466 LysR substrate binding domain At12D13_39110 PF00106 short chain dehydrogenase At12D13_39120 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_39130 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_39140 PF00005 ABC transporter At12D13_39150 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_39160 PF03737 Aldolase/RraA At12D13_39190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_39190 PF03466 LysR substrate binding domain At12D13_39200 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_39200 PF00107 Zinc-binding dehydrogenase At12D13_39210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_39210 PF03466 LysR substrate binding domain At12D13_39220 PF07690 Major Facilitator Superfamily At12D13_39230 PF00296 Luciferase-like monooxygenase At12D13_39240 PF00248 Aldo/keto reductase family At12D13_39250 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At12D13_39250 PF08501 Shikimate dehydrogenase substrate binding domain At12D13_39250 PF01488 Shikimate / quinate 5-dehydrogenase At12D13_39260 PF05199 GMC oxidoreductase At12D13_39260 PF00732 GMC oxidoreductase At12D13_39270 PF12833 Helix-turn-helix domain At12D13_39270 PF02311 AraC-like ligand binding domain At12D13_39280 PF00924 Mechanosensitive ion channel At12D13_39300 PF00196 Bacterial regulatory proteins, luxR family At12D13_39300 PF00072 Response regulator receiver domain At12D13_39340 PF00924 Mechanosensitive ion channel At12D13_39350 PF13493 Domain of unknown function (DUF4118) At12D13_39350 PF08447 PAS fold At12D13_39350 PF00989 PAS fold At12D13_39350 PF00512 His Kinase A (phospho-acceptor) domain At12D13_39350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_39350 PF13426 PAS domain At12D13_39360 PF00672 HAMP domain At12D13_39360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_39360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) At12D13_39360 PF00512 His Kinase A (phospho-acceptor) domain At12D13_39360 PF00072 Response regulator receiver domain At12D13_39360 PF01627 Hpt domain At12D13_39370 PF16123 Hydroxyacylglutathione hydrolase C-terminus At12D13_39370 PF00753 Metallo-beta-lactamase superfamily At12D13_39390 PF00034 Cytochrome c At12D13_39400 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At12D13_39410 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_39420 PF00510 Cytochrome c oxidase subunit III At12D13_39430 PF00510 Cytochrome c oxidase subunit III At12D13_39460 PF01266 FAD dependent oxidoreductase At12D13_39480 PF08669 Glycine cleavage T-protein C-terminal barrel domain At12D13_39480 PF17806 Sarcosine oxidase A3 domain At12D13_39480 PF01571 Aminomethyltransferase folate-binding domain At12D13_39480 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_39500 PF00464 Serine hydroxymethyltransferase At12D13_39510 PF00551 Formyl transferase At12D13_39530 PF00440 Bacterial regulatory proteins, tetR family At12D13_39540 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_39540 PF00107 Zinc-binding dehydrogenase At12D13_39550 PF12833 Helix-turn-helix domain At12D13_39560 PF13407 Periplasmic binding protein domain At12D13_39570 PF00005 ABC transporter At12D13_39580 PF02653 Branched-chain amino acid transport system / permease component At12D13_39590 PF00106 short chain dehydrogenase At12D13_39600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At12D13_39600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At12D13_39620 PF08946 Osmosensory transporter coiled coil At12D13_39620 PF00083 Sugar (and other) transporter At12D13_39640 PF02563 Polysaccharide biosynthesis/export protein At12D13_39680 PF00691 OmpA family At12D13_39790 PF07724 AAA domain (Cdc48 subfamily) At12D13_39790 PF17871 AAA lid domain At12D13_39790 PF10431 C-terminal, D2-small domain, of ClpB protein At12D13_39790 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_39830 PF04717 Type VI secretion system, phage-baseplate injector At12D13_39870 PF08447 PAS fold At12D13_39870 PF08448 PAS fold At12D13_39870 PF00990 Diguanylate cyclase, GGDEF domain At12D13_39870 PF00563 EAL domain At12D13_39900 PF03741 Integral membrane protein TerC family At12D13_39900 PF03471 Transporter associated domain At12D13_39930 PF17912 MalK OB fold domain At12D13_39930 PF00005 ABC transporter At12D13_39930 PF03459 TOBE domain At12D13_39940 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_39950 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_39960 PF13416 Bacterial extracellular solute-binding protein At12D13_39970 PF01261 Xylose isomerase-like TIM barrel At12D13_39980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_39980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_39990 PF00356 Bacterial regulatory proteins, lacI family At12D13_40020 PF13407 Periplasmic binding protein domain At12D13_40030 PF00005 ABC transporter At12D13_40040 PF02653 Branched-chain amino acid transport system / permease component At12D13_40050 PF02653 Branched-chain amino acid transport system / permease component At12D13_40060 PF00356 Bacterial regulatory proteins, lacI family At12D13_40080 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_40080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_40120 PF00034 Cytochrome c At12D13_40150 PF07732 Multicopper oxidase At12D13_40150 PF00394 Multicopper oxidase At12D13_40190 PF00092 von Willebrand factor type A domain At12D13_40200 PF07728 AAA domain (dynein-related subfamily) At12D13_40200 PF08406 CbbQ/NirQ/NorQ C-terminal At12D13_40210 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_40220 PF00034 Cytochrome c At12D13_40240 PF00510 Cytochrome c oxidase subunit III At12D13_40270 PF02441 Flavoprotein At12D13_40280 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase At12D13_40290 PF04343 Protein of unknown function, DUF488 At12D13_40370 PF00005 ABC transporter At12D13_40390 PF06796 Periplasmic nitrate reductase protein NapE At12D13_40420 PF01568 Molydopterin dinucleotide binding domain At12D13_40420 PF00384 Molybdopterin oxidoreductase At12D13_40420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At12D13_40430 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) At12D13_40440 PF03264 NapC/NirT cytochrome c family, N-terminal region At12D13_40460 PF01648 4'-phosphopantetheinyl transferase superfamily At12D13_40460 PF17837 4'-phosphopantetheinyl transferase N-terminal domain At12D13_40470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_40470 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_40470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_40480 PF03466 LysR substrate binding domain At12D13_40480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_40490 PF00356 Bacterial regulatory proteins, lacI family At12D13_40510 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_40530 PF00005 ABC transporter At12D13_40530 PF08402 TOBE domain At12D13_40550 PF01979 Amidohydrolase family At12D13_40550 PF13382 Adenine deaminase C-terminal domain At12D13_40560 PF03796 DnaB-like helicase C terminal domain At12D13_40570 PF01546 Peptidase family M20/M25/M40 At12D13_40570 PF07687 Peptidase dimerisation domain At12D13_40590 PF01244 Membrane dipeptidase (Peptidase family M19) At12D13_40600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_40610 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_40620 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_40620 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_40630 PF00005 ABC transporter At12D13_40630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_40640 PF00005 ABC transporter At12D13_40640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_40650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_40650 PF03466 LysR substrate binding domain At12D13_40660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_40670 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_40680 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_40680 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_40690 PF01425 Amidase At12D13_40700 PF01965 DJ-1/PfpI family At12D13_40720 PF01546 Peptidase family M20/M25/M40 At12D13_40720 PF07687 Peptidase dimerisation domain At12D13_40730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_40730 PF00005 ABC transporter At12D13_40740 PF04198 Putative sugar-binding domain At12D13_40760 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_40770 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_40780 PF08402 TOBE domain At12D13_40780 PF00005 ABC transporter At12D13_40790 PF08125 Mannitol dehydrogenase C-terminal domain At12D13_40790 PF01232 Mannitol dehydrogenase Rossmann domain At12D13_40800 PF13419 Haloacid dehalogenase-like hydrolase At12D13_40810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At12D13_40810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At12D13_40820 PF01380 SIS domain At12D13_40820 PF01418 Helix-turn-helix domain, rpiR family At12D13_40840 PF00730 HhH-GPD superfamily base excision DNA repair protein At12D13_40840 PF00633 Helix-hairpin-helix motif At12D13_40840 PF10576 Iron-sulfur binding domain of endonuclease III At12D13_40860 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At12D13_40860 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At12D13_40880 PF04198 Putative sugar-binding domain At12D13_40880 PF13936 Helix-turn-helix domain At12D13_40890 PF00923 Transaldolase/Fructose-6-phosphate aldolase At12D13_40900 PF09339 IclR helix-turn-helix domain At12D13_40900 PF01614 Bacterial transcriptional regulator At12D13_40930 PF00950 ABC 3 transport family At12D13_40940 PF00950 ABC 3 transport family At12D13_40950 PF00005 ABC transporter At12D13_40960 PF01297 Zinc-uptake complex component A periplasmic At12D13_40980 PF01336 OB-fold nucleic acid binding domain At12D13_40980 PF00152 tRNA synthetases class II (D, K and N) At12D13_40990 PF00749 tRNA synthetases class I (E and Q), catalytic domain At12D13_41000 PF03600 Citrate transporter At12D13_41000 PF02080 TrkA-C domain At12D13_41010 PF03741 Integral membrane protein TerC family At12D13_41010 PF03471 Transporter associated domain At12D13_41030 PF13533 Biotin-lipoyl like At12D13_41040 PF07690 Major Facilitator Superfamily At12D13_41060 PF00356 Bacterial regulatory proteins, lacI family At12D13_41060 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family At12D13_41070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At12D13_41070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At12D13_41080 PF01261 Xylose isomerase-like TIM barrel At12D13_41090 PF00232 Glycosyl hydrolase family 1 At12D13_41100 PF00881 Nitroreductase family At12D13_41110 PF00005 ABC transporter At12D13_41110 PF09383 NIL domain At12D13_41120 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_41130 PF03180 NLPA lipoprotein At12D13_41140 PF00990 Diguanylate cyclase, GGDEF domain At12D13_41140 PF13188 PAS domain At12D13_41140 PF03707 Bacterial signalling protein N terminal repeat At12D13_41140 PF00563 EAL domain At12D13_41180 PF01081 KDPG and KHG aldolase At12D13_41220 PF03824 High-affinity nickel-transport protein At12D13_41260 PF13505 Outer membrane protein beta-barrel domain At12D13_41290 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_41290 PF07683 Cobalamin synthesis protein cobW C-terminal domain At12D13_41300 PF02633 Creatinine amidohydrolase At12D13_41310 PF01047 MarR family At12D13_41320 PF00356 Bacterial regulatory proteins, lacI family At12D13_41330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_41330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_41340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_41340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_41350 PF04962 KduI/IolB family At12D13_41360 PF01261 Xylose isomerase-like TIM barrel At12D13_41370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At12D13_41370 PF00205 Thiamine pyrophosphate enzyme, central domain At12D13_41370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At12D13_41380 PF00294 pfkB family carbohydrate kinase At12D13_41400 PF00005 ABC transporter At12D13_41410 PF00005 ABC transporter At12D13_41410 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_41440 PF13458 Periplasmic binding protein At12D13_41460 PF12833 Helix-turn-helix domain At12D13_41480 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_41480 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_41490 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_41500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_41510 PF00005 ABC transporter At12D13_41510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_41540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_41560 PF01220 Dehydroquinase class II At12D13_41570 PF08501 Shikimate dehydrogenase substrate binding domain At12D13_41570 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At12D13_41580 PF00005 ABC transporter At12D13_41590 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_41600 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_41610 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_41620 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_41630 PF00206 Lyase At12D13_41630 PF10397 Adenylosuccinate lyase C-terminus At12D13_41640 PF00775 Dioxygenase At12D13_41650 PF00775 Dioxygenase At12D13_41650 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal At12D13_41660 PF02627 Carboxymuconolactone decarboxylase family At12D13_41670 PF00561 alpha/beta hydrolase fold At12D13_41680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_41680 PF03466 LysR substrate binding domain At12D13_41690 PF01494 FAD binding domain At12D13_41710 PF01614 Bacterial transcriptional regulator At12D13_41710 PF09339 IclR helix-turn-helix domain At12D13_41720 PF01144 Coenzyme A transferase At12D13_41730 PF01144 Coenzyme A transferase At12D13_41740 PF00108 Thiolase, N-terminal domain At12D13_41740 PF02803 Thiolase, C-terminal domain At12D13_41750 PF00356 Bacterial regulatory proteins, lacI family At12D13_41760 PF13407 Periplasmic binding protein domain At12D13_41770 PF13407 Periplasmic binding protein domain At12D13_41780 PF01261 Xylose isomerase-like TIM barrel At12D13_41790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_41790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_41810 PF00356 Bacterial regulatory proteins, lacI family At12D13_41820 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_41830 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_41840 PF17912 MalK OB fold domain At12D13_41840 PF00005 ABC transporter At12D13_41860 PF07470 Glycosyl Hydrolase Family 88 At12D13_41900 PF01325 Iron dependent repressor, N-terminal DNA binding domain At12D13_41900 PF00480 ROK family At12D13_41920 PF17912 MalK OB fold domain At12D13_41920 PF00005 ABC transporter At12D13_41930 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_41940 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_41950 PF03009 Glycerophosphoryl diester phosphodiesterase family At12D13_41960 PF00459 Inositol monophosphatase family At12D13_41970 PF00106 short chain dehydrogenase At12D13_41980 PF12833 Helix-turn-helix domain At12D13_41980 PF12852 Cupin At12D13_41990 PF00480 ROK family At12D13_42010 PF08402 TOBE domain At12D13_42010 PF00005 ABC transporter At12D13_42020 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_42050 PF11953 Domain of unknown function (DUF3470) At12D13_42050 PF00037 4Fe-4S binding domain At12D13_42060 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At12D13_42060 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At12D13_42120 PF13784 Fic/DOC family N-terminal At12D13_42120 PF02661 Fic/DOC family At12D13_42130 PF01443 Viral (Superfamily 1) RNA helicase At12D13_42130 PF03389 MobA/MobL family At12D13_42130 PF17841 BID domain of Bartonella effector protein (Bep) At12D13_42160 PF02534 Type IV secretory system Conjugative DNA transfer At12D13_42180 PF01758 Sodium Bile acid symporter family At12D13_42190 PF00248 Aldo/keto reductase family At12D13_42200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_42200 PF03466 LysR substrate binding domain At12D13_42220 PF01557 Fumarylacetoacetate (FAA) hydrolase family At12D13_42260 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_42270 PF00005 ABC transporter At12D13_42280 PF09339 IclR helix-turn-helix domain At12D13_42280 PF01614 Bacterial transcriptional regulator At12D13_42290 PF00005 ABC transporter At12D13_42290 PF00664 ABC transporter transmembrane region At12D13_42320 PF00535 Glycosyl transferase family 2 At12D13_42350 PF01527 Transposase At12D13_42360 PF05045 Rhamnan synthesis protein F At12D13_42380 PF00483 Nucleotidyl transferase At12D13_42390 PF04321 RmlD substrate binding domain At12D13_42400 PF16363 GDP-mannose 4,6 dehydratase At12D13_42410 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase At12D13_42420 PF00580 UvrD/REP helicase N-terminal domain At12D13_42420 PF13361 UvrD-like helicase C-terminal domain At12D13_42430 PF00005 ABC transporter At12D13_42430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_42440 PF00005 ABC transporter At12D13_42440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_42450 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_42450 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_42460 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_42470 PF07729 FCD domain At12D13_42470 PF00392 Bacterial regulatory proteins, gntR family At12D13_42480 PF03786 D-mannonate dehydratase (UxuA) At12D13_42490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_42510 PF13188 PAS domain At12D13_42510 PF03707 Bacterial signalling protein N terminal repeat At12D13_42510 PF00563 EAL domain At12D13_42510 PF00990 Diguanylate cyclase, GGDEF domain At12D13_42540 PF02735 Ku70/Ku80 beta-barrel domain At12D13_42550 PF01068 ATP dependent DNA ligase domain At12D13_42550 PF13298 DNA polymerase Ligase (LigD) At12D13_42550 PF04679 ATP dependent DNA ligase C terminal region At12D13_42560 PF02735 Ku70/Ku80 beta-barrel domain At12D13_42570 PF01384 Phosphate transporter family At12D13_42580 PF01865 Protein of unknown function DUF47 At12D13_42600 PF00873 AcrB/AcrD/AcrF family At12D13_42610 PF13533 Biotin-lipoyl like At12D13_42620 PF00072 Response regulator receiver domain At12D13_42620 PF00486 Transcriptional regulatory protein, C terminal At12D13_42630 PF00512 His Kinase A (phospho-acceptor) domain At12D13_42630 PF00672 HAMP domain At12D13_42630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_42650 PF03466 LysR substrate binding domain At12D13_42650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_42660 PF00141 Peroxidase At12D13_42680 PF02311 AraC-like ligand binding domain At12D13_42680 PF12833 Helix-turn-helix domain At12D13_42690 PF00171 Aldehyde dehydrogenase family At12D13_42700 PF03466 LysR substrate binding domain At12D13_42700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_42710 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At12D13_42720 PF00884 Sulfatase At12D13_42720 PF12411 Choline sulfatase enzyme C terminal At12D13_42730 PF00294 pfkB family carbohydrate kinase At12D13_42740 PF00005 ABC transporter At12D13_42740 PF08402 TOBE domain At12D13_42750 PF00206 Lyase At12D13_42750 PF14698 Argininosuccinate lyase C-terminal At12D13_42760 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_42770 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_42780 PF13416 Bacterial extracellular solute-binding protein At12D13_42790 PF00480 ROK family At12D13_42850 PF02056 Family 4 glycosyl hydrolase At12D13_42850 PF11975 Family 4 glycosyl hydrolase C-terminal domain At12D13_42860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_42870 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_42880 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_42880 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_42890 PF00005 ABC transporter At12D13_42890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_42900 PF02056 Family 4 glycosyl hydrolase At12D13_42900 PF11975 Family 4 glycosyl hydrolase C-terminal domain At12D13_42910 PF13533 Biotin-lipoyl like At12D13_42920 PF00005 ABC transporter At12D13_42960 PF00072 Response regulator receiver domain At12D13_42970 PF00091 Tubulin/FtsZ family, GTPase domain At12D13_42970 PF12327 FtsZ family, C-terminal domain At12D13_42980 PF00392 Bacterial regulatory proteins, gntR family At12D13_42980 PF07729 FCD domain At12D13_42990 PF00701 Dihydrodipicolinate synthetase family At12D13_43000 PF02615 Malate/L-lactate dehydrogenase At12D13_43030 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_43040 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_43050 PF00005 ABC transporter At12D13_43060 PF01266 FAD dependent oxidoreductase At12D13_43080 PF05544 Proline racemase At12D13_43090 PF00356 Bacterial regulatory proteins, lacI family At12D13_43110 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_43130 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_43140 PF00005 ABC transporter At12D13_43150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_43150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_43160 PF03707 Bacterial signalling protein N terminal repeat At12D13_43160 PF00990 Diguanylate cyclase, GGDEF domain At12D13_43160 PF00563 EAL domain At12D13_43170 PF02530 Porin subfamily At12D13_43180 PF01979 Amidohydrolase family At12D13_43190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_43210 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_43210 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_43220 PF01979 Amidohydrolase family At12D13_43230 PF01979 Amidohydrolase family At12D13_43240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_43240 PF00005 ABC transporter At12D13_43250 PF00005 ABC transporter At12D13_43250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_43260 PF07729 FCD domain At12D13_43260 PF00392 Bacterial regulatory proteins, gntR family At12D13_43270 PF01613 Flavin reductase like domain At12D13_43280 PF01177 Asp/Glu/Hydantoin racemase At12D13_43290 PF03466 LysR substrate binding domain At12D13_43290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_43310 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit At12D13_43310 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region At12D13_43310 PF00037 4Fe-4S binding domain At12D13_43320 PF00037 4Fe-4S binding domain At12D13_43320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At12D13_43320 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region At12D13_43320 PF00384 Molybdopterin oxidoreductase At12D13_43320 PF01568 Molydopterin dinucleotide binding domain At12D13_43340 PF07690 Major Facilitator Superfamily At12D13_43350 PF00512 His Kinase A (phospho-acceptor) domain At12D13_43350 PF00672 HAMP domain At12D13_43350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_43360 PF00072 Response regulator receiver domain At12D13_43360 PF00486 Transcriptional regulatory protein, C terminal At12D13_43410 PF05532 CsbD-like At12D13_43420 PF00196 Bacterial regulatory proteins, luxR family At12D13_43420 PF00072 Response regulator receiver domain At12D13_43430 PF13581 Histidine kinase-like ATPase domain At12D13_43430 PF13426 PAS domain At12D13_43430 PF07536 HWE histidine kinase At12D13_43440 PF00392 Bacterial regulatory proteins, gntR family At12D13_43440 PF07729 FCD domain At12D13_43450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_43460 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_43490 PF00005 ABC transporter At12D13_43490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_43520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At12D13_43520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At12D13_43530 PF03401 Tripartite tricarboxylate transporter family receptor At12D13_43540 PF00664 ABC transporter transmembrane region At12D13_43540 PF00005 ABC transporter At12D13_43550 PF00005 ABC transporter At12D13_43570 PF00577 Outer membrane usher protein At12D13_43570 PF13953 PapC C-terminal domain At12D13_43570 PF13954 PapC N-terminal domain At12D13_43600 PF11791 Aconitate B N-terminal domain At12D13_43600 PF06434 Aconitate hydratase 2 N-terminus At12D13_43600 PF00330 Aconitase family (aconitate hydratase) At12D13_43610 PF00672 HAMP domain At12D13_43610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_43630 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_43650 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_43650 PF00107 Zinc-binding dehydrogenase At12D13_43660 PF00158 Sigma-54 interaction domain At12D13_43660 PF02954 Bacterial regulatory protein, Fis family At12D13_43660 PF01590 GAF domain At12D13_43680 PF00356 Bacterial regulatory proteins, lacI family At12D13_43700 PF00005 ABC transporter At12D13_43710 PF02653 Branched-chain amino acid transport system / permease component At12D13_43720 PF02653 Branched-chain amino acid transport system / permease component At12D13_43730 PF01261 Xylose isomerase-like TIM barrel At12D13_43750 PF01261 Xylose isomerase-like TIM barrel At12D13_43770 PF00005 ABC transporter At12D13_43780 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_43790 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_43800 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_43810 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family At12D13_43820 PF01321 Creatinase/Prolidase N-terminal domain At12D13_43820 PF00557 Metallopeptidase family M24 At12D13_43830 PF02423 Ornithine cyclodeaminase/mu-crystallin family At12D13_43840 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_43850 PF00155 Aminotransferase class I and II At12D13_43850 PF00392 Bacterial regulatory proteins, gntR family At12D13_43860 PF00202 Aminotransferase class-III At12D13_43870 PF00171 Aldehyde dehydrogenase family At12D13_43880 PF01037 Lrp/AsnC ligand binding domain At12D13_43890 PF13302 Acetyltransferase (GNAT) domain At12D13_43930 PF04199 Putative cyclase At12D13_43940 PF01494 FAD binding domain At12D13_43950 PF00190 Cupin At12D13_43970 PF00196 Bacterial regulatory proteins, luxR family At12D13_43970 PF00072 Response regulator receiver domain At12D13_43980 PF00072 Response regulator receiver domain At12D13_43980 PF00196 Bacterial regulatory proteins, luxR family At12D13_43990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_43990 PF00512 His Kinase A (phospho-acceptor) domain At12D13_43990 PF08448 PAS fold At12D13_43990 PF00072 Response regulator receiver domain At12D13_43990 PF13426 PAS domain At12D13_44000 PF00384 Molybdopterin oxidoreductase At12D13_44010 PF00210 Ferritin-like domain At12D13_44020 PF00561 alpha/beta hydrolase fold At12D13_44050 PF06441 Epoxide hydrolase N terminus At12D13_44060 PF00171 Aldehyde dehydrogenase family At12D13_44080 PF02566 OsmC-like protein At12D13_44090 PF00672 HAMP domain At12D13_44090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_44090 PF00512 His Kinase A (phospho-acceptor) domain At12D13_44100 PF00072 Response regulator receiver domain At12D13_44100 PF00486 Transcriptional regulatory protein, C terminal At12D13_44110 PF00561 alpha/beta hydrolase fold At12D13_44130 PF17991 Thioredoxin like C-terminal domain At12D13_44130 PF02683 Cytochrome C biogenesis protein transmembrane region At12D13_44130 PF00578 AhpC/TSA family At12D13_44180 PF13426 PAS domain At12D13_44180 PF00072 Response regulator receiver domain At12D13_44180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_44190 PF00486 Transcriptional regulatory protein, C terminal At12D13_44190 PF00072 Response regulator receiver domain At12D13_44220 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_44230 PF00005 ABC transporter At12D13_44230 PF08402 TOBE domain At12D13_44240 PF00459 Inositol monophosphatase family At12D13_44260 PF16363 GDP-mannose 4,6 dehydratase At12D13_44270 PF01370 NAD dependent epimerase/dehydratase family At12D13_44280 PF13229 Right handed beta helix region At12D13_44280 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) At12D13_44280 PF12708 Pectate lyase superfamily protein At12D13_44320 PF00196 Bacterial regulatory proteins, luxR family At12D13_44320 PF00072 Response regulator receiver domain At12D13_44330 PF02585 GlcNAc-PI de-N-acetylase At12D13_44340 PF00483 Nucleotidyl transferase At12D13_44350 PF08484 C-methyltransferase C-terminal domain At12D13_44350 PF08421 Putative zinc binding domain At12D13_44360 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase At12D13_44370 PF16254 Domain of unknown function (DUF4910) At12D13_44370 PF09940 Domain of unknown function (DUF2172) At12D13_44370 PF16221 winged helix-turn-helix At12D13_44380 PF16363 GDP-mannose 4,6 dehydratase At12D13_44390 PF00202 Aminotransferase class-III At12D13_44400 PF00202 Aminotransferase class-III At12D13_44410 PF00072 Response regulator receiver domain At12D13_44410 PF00196 Bacterial regulatory proteins, luxR family At12D13_44420 PF00196 Bacterial regulatory proteins, luxR family At12D13_44420 PF00072 Response regulator receiver domain At12D13_44460 PF13439 Glycosyltransferase Family 4 At12D13_44460 PF00534 Glycosyl transferases group 1 At12D13_44480 PF00953 Glycosyl transferase family 4 At12D13_44520 PF13439 Glycosyltransferase Family 4 At12D13_44520 PF00534 Glycosyl transferases group 1 At12D13_44530 PF13439 Glycosyltransferase Family 4 At12D13_44530 PF00534 Glycosyl transferases group 1 At12D13_44550 PF01037 Lrp/AsnC ligand binding domain At12D13_44600 PF13193 AMP-binding enzyme C-terminal domain At12D13_44600 PF00501 AMP-binding enzyme At12D13_44610 PF00108 Thiolase, N-terminal domain At12D13_44610 PF02803 Thiolase, C-terminal domain At12D13_44620 PF09339 IclR helix-turn-helix domain At12D13_44620 PF01614 Bacterial transcriptional regulator At12D13_44640 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At12D13_44640 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_44650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_44680 PF00723 Glycosyl hydrolases family 15 At12D13_44680 PF09137 Glucodextranase, domain N At12D13_44690 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain At12D13_44690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At12D13_44700 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain At12D13_44700 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain At12D13_44770 PF13614 AAA domain At12D13_44770 PF00376 MerR family regulatory protein At12D13_44780 PF02195 ParB-like nuclease domain At12D13_44780 PF07506 RepB plasmid partitioning protein At12D13_44790 PF11800 Replication protein C C-terminal region At12D13_44790 PF03428 Replication protein C N-terminal domain At12D13_44810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_44810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_44820 PF00005 ABC transporter At12D13_44830 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_44860 PF02525 Flavodoxin-like fold At12D13_44880 PF00239 Resolvase, N terminal domain At12D13_44920 PF07756 Protein of unknown function (DUF1612) At12D13_44920 PF11972 HTH DNA binding domain At12D13_44940 PF13676 TIR domain At12D13_44960 PF02511 Thymidylate synthase complementing protein At12D13_45060 PF00248 Aldo/keto reductase family At12D13_45080 PF07690 Major Facilitator Superfamily At12D13_45090 PF01361 Tautomerase enzyme At12D13_45110 PF03466 LysR substrate binding domain At12D13_45110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_45120 PF10518 TAT (twin-arginine translocation) pathway signal sequence At12D13_45120 PF01799 [2Fe-2S] binding domain At12D13_45120 PF00111 2Fe-2S iron-sulfur cluster binding domain At12D13_45130 PF03450 CO dehydrogenase flavoprotein C-terminal domain At12D13_45130 PF00941 FAD binding domain in molybdopterin dehydrogenase At12D13_45140 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase At12D13_45140 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain At12D13_45150 PF02625 XdhC and CoxI family At12D13_45150 PF13478 XdhC Rossmann domain At12D13_45160 PF06463 Molybdenum Cofactor Synthesis C At12D13_45160 PF04055 Radical SAM superfamily At12D13_45200 PF02129 X-Pro dipeptidyl-peptidase (S15 family) At12D13_45210 PF07690 Major Facilitator Superfamily At12D13_45220 PF03466 LysR substrate binding domain At12D13_45220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_45260 PF01810 LysE type translocator At12D13_45280 PF00196 Bacterial regulatory proteins, luxR family At12D13_45280 PF00072 Response regulator receiver domain At12D13_45290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_45290 PF07730 Histidine kinase At12D13_45290 PF00672 HAMP domain At12D13_45310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_45310 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At12D13_45320 PF01638 HxlR-like helix-turn-helix At12D13_45370 PF00873 AcrB/AcrD/AcrF family At12D13_45390 PF00440 Bacterial regulatory proteins, tetR family At12D13_45410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_45410 PF03466 LysR substrate binding domain At12D13_45420 PF12146 Serine aminopeptidase, S33 At12D13_45430 PF12146 Serine aminopeptidase, S33 At12D13_45450 PF00561 alpha/beta hydrolase fold At12D13_45500 PF04193 PQ loop repeat At12D13_45510 PF00005 ABC transporter At12D13_45510 PF00664 ABC transporter transmembrane region At12D13_45540 PF13426 PAS domain At12D13_45540 PF13581 Histidine kinase-like ATPase domain At12D13_45540 PF07536 HWE histidine kinase At12D13_45570 PF00072 Response regulator receiver domain At12D13_45600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At12D13_45600 PF00128 Alpha amylase, catalytic domain At12D13_45610 PF04193 PQ loop repeat At12D13_45640 PF03358 NADPH-dependent FMN reductase At12D13_45640 PF01566 Natural resistance-associated macrophage protein At12D13_45670 PF00199 Catalase At12D13_45670 PF06628 Catalase-related immune-responsive At12D13_45670 PF18011 C-terminal domain found in long catalases At12D13_45680 PF05974 Domain of unknown function (DUF892) At12D13_45740 PF04542 Sigma-70 region 2 At12D13_45740 PF08281 Sigma-70, region 4 At12D13_45750 PF11941 Domain of unknown function (DUF3459) At12D13_45750 PF00128 Alpha amylase, catalytic domain At12D13_45750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At12D13_45760 PF08323 Starch synthase catalytic domain At12D13_45760 PF00534 Glycosyl transferases group 1 At12D13_45920 PF00356 Bacterial regulatory proteins, lacI family At12D13_45940 PF02653 Branched-chain amino acid transport system / permease component At12D13_45950 PF00005 ABC transporter At12D13_45970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_45970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_45980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_45980 PF00005 ABC transporter At12D13_45990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_45990 PF00005 ABC transporter At12D13_46000 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_46000 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_46010 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_46020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_46030 PF00392 Bacterial regulatory proteins, gntR family At12D13_46030 PF07729 FCD domain At12D13_46040 PF00701 Dihydrodipicolinate synthetase family At12D13_46050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_46050 PF13378 Enolase C-terminal domain-like At12D13_46060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_46060 PF03466 LysR substrate binding domain At12D13_46070 PF00043 Glutathione S-transferase, C-terminal domain At12D13_46070 PF02798 Glutathione S-transferase, N-terminal domain At12D13_46140 PF02735 Ku70/Ku80 beta-barrel domain At12D13_46150 PF02735 Ku70/Ku80 beta-barrel domain At12D13_46160 PF13298 DNA polymerase Ligase (LigD) At12D13_46160 PF01068 ATP dependent DNA ligase domain At12D13_46160 PF04679 ATP dependent DNA ligase C terminal region At12D13_46170 PF00011 Hsp20/alpha crystallin family At12D13_46200 PF04679 ATP dependent DNA ligase C terminal region At12D13_46200 PF01068 ATP dependent DNA ligase domain At12D13_46200 PF13298 DNA polymerase Ligase (LigD) At12D13_46230 PF13416 Bacterial extracellular solute-binding protein At12D13_46250 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_46270 PF00005 ABC transporter At12D13_46270 PF08402 TOBE domain At12D13_46280 PF01418 Helix-turn-helix domain, rpiR family At12D13_46280 PF01380 SIS domain At12D13_46290 PF01047 MarR family At12D13_46300 PF00561 alpha/beta hydrolase fold At12D13_46320 PF00701 Dihydrodipicolinate synthetase family At12D13_46330 PF00005 ABC transporter At12D13_46330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_46350 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_46360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_46380 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At12D13_46390 PF00465 Iron-containing alcohol dehydrogenase At12D13_46400 PF00392 Bacterial regulatory proteins, gntR family At12D13_46400 PF07729 FCD domain At12D13_46410 PF07005 Sugar-binding N-terminal domain At12D13_46410 PF17042 Nucleotide-binding C-terminal domain At12D13_46420 PF00356 Bacterial regulatory proteins, lacI family At12D13_46430 PF01547 Bacterial extracellular solute-binding protein At12D13_46440 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_46450 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_46460 PF07944 Beta-L-arabinofuranosidase, GH127 At12D13_46470 PF00005 ABC transporter At12D13_46470 PF17912 MalK OB fold domain At12D13_46480 PF03466 LysR substrate binding domain At12D13_46480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_46510 PF06745 KaiC At12D13_46520 PF13581 Histidine kinase-like ATPase domain At12D13_46520 PF07536 HWE histidine kinase At12D13_46520 PF13426 PAS domain At12D13_46530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_46530 PF03466 LysR substrate binding domain At12D13_46540 PF00561 alpha/beta hydrolase fold At12D13_46560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At12D13_46570 PF00873 AcrB/AcrD/AcrF family At12D13_46600 PF00326 Prolyl oligopeptidase family At12D13_46600 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain At12D13_46610 PF00326 Prolyl oligopeptidase family At12D13_46610 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain At12D13_46630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_46630 PF08521 Two-component sensor kinase N-terminal At12D13_46630 PF00512 His Kinase A (phospho-acceptor) domain At12D13_46640 PF00072 Response regulator receiver domain At12D13_46640 PF00486 Transcriptional regulatory protein, C terminal At12D13_46650 PF00202 Aminotransferase class-III At12D13_46660 PF03466 LysR substrate binding domain At12D13_46660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_46670 PF00285 Citrate synthase, C-terminal domain At12D13_46680 PF00285 Citrate synthase, C-terminal domain At12D13_46710 PF00593 TonB dependent receptor At12D13_46710 PF07715 TonB-dependent Receptor Plug Domain At12D13_46720 PF01497 Periplasmic binding protein At12D13_46740 PF01032 FecCD transport family At12D13_46750 PF01032 FecCD transport family At12D13_46760 PF00005 ABC transporter At12D13_46800 PF03358 NADPH-dependent FMN reductase At12D13_46820 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_46820 PF00107 Zinc-binding dehydrogenase At12D13_46830 PF03466 LysR substrate binding domain At12D13_46830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_46840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_46840 PF03466 LysR substrate binding domain At12D13_46850 PF01842 ACT domain At12D13_46850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_46850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_46860 PF03737 Aldolase/RraA At12D13_46890 PF01970 Tripartite tricarboxylate transporter TctA family At12D13_46900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_46900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_46910 PF13660 Domain of unknown function (DUF4147) At12D13_46910 PF05161 MOFRL family At12D13_46940 PF13426 PAS domain At12D13_46940 PF00072 Response regulator receiver domain At12D13_46940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_46970 PF02661 Fic/DOC family At12D13_46970 PF12728 Helix-turn-helix domain At12D13_47050 PF01145 SPFH domain / Band 7 family At12D13_47050 PF15975 Flotillin At12D13_47100 PF03466 LysR substrate binding domain At12D13_47100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_47140 PF03466 LysR substrate binding domain At12D13_47140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_47160 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_47170 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_47180 PF00005 ABC transporter At12D13_47180 PF08402 TOBE domain At12D13_47190 PF13454 FAD-NAD(P)-binding At12D13_47200 PF01323 DSBA-like thioredoxin domain At12D13_47230 PF01554 MatE At12D13_47270 PF00356 Bacterial regulatory proteins, lacI family At12D13_47270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family At12D13_47280 PF01261 Xylose isomerase-like TIM barrel At12D13_47290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_47290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_47300 PF01261 Xylose isomerase-like TIM barrel At12D13_47310 PF01638 HxlR-like helix-turn-helix At12D13_47370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_47370 PF00672 HAMP domain At12D13_47390 PF00106 short chain dehydrogenase At12D13_47400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At12D13_47410 PF00561 alpha/beta hydrolase fold At12D13_47420 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_47420 PF00107 Zinc-binding dehydrogenase At12D13_47430 PF05406 WGR domain At12D13_47440 PF00011 Hsp20/alpha crystallin family At12D13_47460 PF00005 ABC transporter At12D13_47500 PF05035 2-keto-3-deoxy-galactonokinase At12D13_47510 PF00701 Dihydrodipicolinate synthetase family At12D13_47520 PF13378 Enolase C-terminal domain-like At12D13_47520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_47540 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_47550 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_47560 PF00005 ABC transporter At12D13_47560 PF17912 MalK OB fold domain At12D13_47570 PF16363 GDP-mannose 4,6 dehydratase At12D13_47580 PF01614 Bacterial transcriptional regulator At12D13_47580 PF09339 IclR helix-turn-helix domain At12D13_47600 PF02705 K+ potassium transporter At12D13_47620 PF00817 impB/mucB/samB family At12D13_47620 PF11799 impB/mucB/samB family C-terminal domain At12D13_47650 PF01063 Amino-transferase class IV At12D13_47660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_47680 PF00117 Glutamine amidotransferase class-I At12D13_47680 PF06418 CTP synthase N-terminus At12D13_47690 PF01321 Creatinase/Prolidase N-terminal domain At12D13_47690 PF00557 Metallopeptidase family M24 At12D13_47700 PF13378 Enolase C-terminal domain-like At12D13_47700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_47710 PF01546 Peptidase family M20/M25/M40 At12D13_47710 PF07687 Peptidase dimerisation domain At12D13_47720 PF00005 ABC transporter At12D13_47730 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_47750 PF07729 FCD domain At12D13_47750 PF00392 Bacterial regulatory proteins, gntR family At12D13_47810 PF08281 Sigma-70, region 4 At12D13_47810 PF04542 Sigma-70 region 2 At12D13_47830 PF06628 Catalase-related immune-responsive At12D13_47830 PF00199 Catalase At12D13_47830 PF18011 C-terminal domain found in long catalases At12D13_47860 PF05974 Domain of unknown function (DUF892) At12D13_47880 PF00561 alpha/beta hydrolase fold At12D13_47890 PF17925 Tetracyclin repressor-like, C-terminal domain At12D13_47890 PF00440 Bacterial regulatory proteins, tetR family At12D13_47900 PF02625 XdhC and CoxI family At12D13_47900 PF13478 XdhC Rossmann domain At12D13_47910 PF00111 2Fe-2S iron-sulfur cluster binding domain At12D13_47910 PF01799 [2Fe-2S] binding domain At12D13_47920 PF00941 FAD binding domain in molybdopterin dehydrogenase At12D13_47920 PF03450 CO dehydrogenase flavoprotein C-terminal domain At12D13_47930 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain At12D13_47930 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase At12D13_47940 PF12804 MobA-like NTP transferase domain At12D13_47940 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_47990 PF00486 Transcriptional regulatory protein, C terminal At12D13_47990 PF00072 Response regulator receiver domain At12D13_48000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_48000 PF08918 PhoQ Sensor At12D13_48030 PF00072 Response regulator receiver domain At12D13_48030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_48030 PF13426 PAS domain At12D13_48040 PF06745 KaiC At12D13_48070 PF00313 'Cold-shock' DNA-binding domain At12D13_48080 PF00226 DnaJ domain At12D13_48110 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At12D13_48110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_48120 PF00005 ABC transporter At12D13_48140 PF02653 Branched-chain amino acid transport system / permease component At12D13_48160 PF00005 ABC transporter At12D13_48160 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_48170 PF00296 Luciferase-like monooxygenase At12D13_48180 PF03358 NADPH-dependent FMN reductase At12D13_48190 PF13581 Histidine kinase-like ATPase domain At12D13_48190 PF07536 HWE histidine kinase At12D13_48190 PF13426 PAS domain At12D13_48220 PF13458 Periplasmic binding protein At12D13_48230 PF02653 Branched-chain amino acid transport system / permease component At12D13_48250 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_48250 PF00005 ABC transporter At12D13_48260 PF00005 ABC transporter At12D13_48260 PF09383 NIL domain At12D13_48270 PF00795 Carbon-nitrogen hydrolase At12D13_48280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At12D13_48280 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_48300 PF13533 Biotin-lipoyl like At12D13_48340 PF12833 Helix-turn-helix domain At12D13_48340 PF02311 AraC-like ligand binding domain At12D13_48370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_48370 PF03466 LysR substrate binding domain At12D13_48380 PF00753 Metallo-beta-lactamase superfamily At12D13_48400 PF13614 AAA domain At12D13_48410 PF02195 ParB-like nuclease domain At12D13_48410 PF07506 RepB plasmid partitioning protein At12D13_48420 PF03428 Replication protein C N-terminal domain At12D13_48420 PF11800 Replication protein C C-terminal region At12D13_48470 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_48480 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_48520 PF03358 NADPH-dependent FMN reductase At12D13_48520 PF01566 Natural resistance-associated macrophage protein At12D13_48540 PF06150 ChaB At12D13_48560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At12D13_48560 PF00205 Thiamine pyrophosphate enzyme, central domain At12D13_48560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At12D13_48600 PF03705 CheR methyltransferase, all-alpha domain At12D13_48600 PF01739 CheR methyltransferase, SAM binding domain At12D13_48600 PF01339 CheB methylesterase At12D13_48600 PF08448 PAS fold At12D13_48670 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_48690 PF00107 Zinc-binding dehydrogenase At12D13_48690 PF13823 Alcohol dehydrogenase GroES-associated At12D13_48690 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_48700 PF00384 Molybdopterin oxidoreductase At12D13_48730 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_48740 PF00510 Cytochrome c oxidase subunit III At12D13_48830 PF08241 Methyltransferase domain At12D13_48840 PF08281 Sigma-70, region 4 At12D13_48840 PF04542 Sigma-70 region 2 At12D13_48850 PF00128 Alpha amylase, catalytic domain At12D13_48850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At12D13_48850 PF11941 Domain of unknown function (DUF3459) At12D13_48870 PF08323 Starch synthase catalytic domain At12D13_48870 PF00534 Glycosyl transferases group 1 At12D13_48880 PF00067 Cytochrome P450 At12D13_48940 PF05974 Domain of unknown function (DUF892) At12D13_48990 PF03167 Uracil DNA glycosylase superfamily At12D13_49010 PF01370 NAD dependent epimerase/dehydratase family At12D13_49060 PF16363 GDP-mannose 4,6 dehydratase At12D13_49070 PF01370 NAD dependent epimerase/dehydratase family At12D13_49080 PF00107 Zinc-binding dehydrogenase At12D13_49080 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_49230 PF00872 Transposase, Mutator family At12D13_49240 PF00872 Transposase, Mutator family At12D13_49260 PF13784 Fic/DOC family N-terminal At12D13_49260 PF02661 Fic/DOC family At12D13_49280 PF12951 Passenger-associated-transport-repeat At12D13_49290 PF13505 Outer membrane protein beta-barrel domain At12D13_49310 PF07536 HWE histidine kinase At12D13_49310 PF08447 PAS fold At12D13_49310 PF13426 PAS domain At12D13_49320 PF06745 KaiC At12D13_49330 PF07730 Histidine kinase At12D13_49330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_49340 PF00072 Response regulator receiver domain At12D13_49370 PF00665 Integrase core domain At12D13_49380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_49380 PF03466 LysR substrate binding domain At12D13_49400 PF03466 LysR substrate binding domain At12D13_49400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_49410 PF00011 Hsp20/alpha crystallin family At12D13_49420 PF00011 Hsp20/alpha crystallin family At12D13_49440 PF01192 RNA polymerase Rpb6 At12D13_49590 PF11972 HTH DNA binding domain At12D13_49590 PF07756 Protein of unknown function (DUF1612) At12D13_49630 PF01850 PIN domain At12D13_49650 PF07694 5TMR of 5TMR-LYT At12D13_49650 PF00990 Diguanylate cyclase, GGDEF domain At12D13_49660 PF12146 Serine aminopeptidase, S33 At12D13_49740 PF00239 Resolvase, N terminal domain At12D13_49740 PF02796 Helix-turn-helix domain of resolvase At12D13_50180 PF11798 IMS family HHH motif At12D13_50180 PF13438 Domain of unknown function (DUF4113) At12D13_50180 PF00817 impB/mucB/samB family At12D13_50180 PF11799 impB/mucB/samB family C-terminal domain At12D13_50190 PF00717 Peptidase S24-like At12D13_50250 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) At12D13_50430 PF03466 LysR substrate binding domain At12D13_50430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_50440 PF06441 Epoxide hydrolase N terminus