locus-tag class description EML4058_00005 PF11638 DnaA N-terminal domain EML4058_00005 PF08299 Bacterial dnaA protein helix-turn-helix EML4058_00005 PF00308 Bacterial dnaA protein EML4058_00010 PF04055 Radical SAM superfamily EML4058_00010 PF06969 HemN C-terminal domain EML4058_00015 PF01725 Ham1 family EML4058_00020 PF01138 3' exoribonuclease family, domain 1 EML4058_00020 PF03725 3' exoribonuclease family, domain 2 EML4058_00025 PF01628 HrcA protein C terminal domain EML4058_00030 PF01025 GrpE EML4058_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EML4058_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EML4058_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus EML4058_00045 PF04552 Sigma-54, DNA binding domain EML4058_00045 PF04963 Sigma-54 factor, core binding domain EML4058_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) EML4058_00050 PF00005 ABC transporter EML4058_00055 PF03968 OstA-like protein EML4058_00065 PF01343 Peptidase family S49 EML4058_00070 PF00216 Bacterial DNA-binding protein EML4058_00080 PF10672 S-adenosylmethionine-dependent methyltransferase EML4058_00080 PF02926 THUMP domain EML4058_00080 PF01170 Putative RNA methylase family UPF0020 EML4058_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding EML4058_00085 PF00588 SpoU rRNA Methylase family EML4058_00090 PF01252 Signal peptidase (SPase) II EML4058_00095 PF00512 His Kinase A (phospho-acceptor) domain EML4058_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_00095 PF00672 HAMP domain EML4058_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EML4058_00095 PF00072 Response regulator receiver domain EML4058_00095 PF01627 Hpt domain EML4058_00105 PF05190 MutS family domain IV EML4058_00105 PF00488 MutS domain V EML4058_00105 PF01624 MutS domain I EML4058_00105 PF05192 MutS domain III EML4058_00105 PF05188 MutS domain II EML4058_00110 PF01966 HD domain EML4058_00110 PF08335 GlnD PII-uridylyltransferase EML4058_00110 PF01842 ACT domain EML4058_00110 PF01909 Nucleotidyltransferase domain EML4058_00115 PF03023 Lipid II flippase MurJ EML4058_00125 PF00579 tRNA synthetases class I (W and Y) EML4058_00135 PF01106 NifU-like domain EML4058_00140 PF00814 Glycoprotease family EML4058_00150 PF01475 Ferric uptake regulator family EML4058_00155 PF01553 Acyltransferase EML4058_00160 PF00919 Uncharacterized protein family UPF0004 EML4058_00160 PF04055 Radical SAM superfamily EML4058_00160 PF01938 TRAM domain EML4058_00165 PF02562 PhoH-like protein EML4058_00170 PF02130 Uncharacterized protein family UPF0054 EML4058_00175 PF03471 Transporter associated domain EML4058_00175 PF00571 CBS domain EML4058_00180 PF00795 Carbon-nitrogen hydrolase EML4058_00185 PF01381 Helix-turn-helix EML4058_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain EML4058_00190 PF02772 S-adenosylmethionine synthetase, central domain EML4058_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain EML4058_00195 PF02390 Putative methyltransferase EML4058_00200 PF00294 pfkB family carbohydrate kinase EML4058_00205 PF02646 RmuC family EML4058_00210 PF01327 Polypeptide deformylase EML4058_00215 PF00551 Formyl transferase EML4058_00215 PF02911 Formyl transferase, C-terminal domain EML4058_00220 PF01416 tRNA pseudouridine synthase EML4058_00230 PF01546 Peptidase family M20/M25/M40 EML4058_00230 PF07687 Peptidase dimerisation domain EML4058_00235 PF14602 Hexapeptide repeat of succinyl-transferase EML4058_00235 PF00132 Bacterial transferase hexapeptide (six repeats) EML4058_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EML4058_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_00245 PF00672 HAMP domain EML4058_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase EML4058_00255 PF00011 Hsp20/alpha crystallin family EML4058_00280 PF00696 Amino acid kinase family EML4058_00290 PF01926 50S ribosome-binding GTPase EML4058_00295 PF02096 60Kd inner membrane protein EML4058_00295 PF14849 YidC periplasmic domain EML4058_00300 PF00825 Ribonuclease P EML4058_00305 PF00468 Ribosomal protein L34 EML4058_00310 PF02203 Tar ligand binding domain homologue EML4058_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_00310 PF00672 HAMP domain EML4058_00315 PF00512 His Kinase A (phospho-acceptor) domain EML4058_00315 PF00672 HAMP domain EML4058_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_00325 PF01209 ubiE/COQ5 methyltransferase family EML4058_00330 PF00005 ABC transporter EML4058_00335 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_00340 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_00350 PF00149 Calcineurin-like phosphoesterase EML4058_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EML4058_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EML4058_00365 PF05544 Proline racemase EML4058_00370 PF01979 Amidohydrolase family EML4058_00375 PF00156 Phosphoribosyl transferase domain EML4058_00380 PF00294 pfkB family carbohydrate kinase EML4058_00395 PF00342 Phosphoglucose isomerase EML4058_00400 PF00501 AMP-binding enzyme EML4058_00400 PF13193 AMP-binding enzyme C-terminal domain EML4058_00405 PF08402 TOBE domain EML4058_00405 PF00005 ABC transporter EML4058_00415 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_00420 PF00593 TonB dependent receptor EML4058_00420 PF07715 TonB-dependent Receptor Plug Domain EML4058_00440 PF01679 Proteolipid membrane potential modulator EML4058_00460 PF03976 Polyphosphate kinase 2 (PPK2) EML4058_00465 PF00512 His Kinase A (phospho-acceptor) domain EML4058_00465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_00465 PF16736 Single Cache-like EML4058_00465 PF00989 PAS fold EML4058_00470 PF12849 PBP superfamily domain EML4058_00475 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_00480 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_00485 PF00005 ABC transporter EML4058_00490 PF01895 PhoU domain EML4058_00495 PF00072 Response regulator receiver domain EML4058_00495 PF00486 Transcriptional regulatory protein, C terminal EML4058_00505 PF00202 Aminotransferase class-III EML4058_00510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EML4058_00510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EML4058_00515 PF01430 Hsp33 protein EML4058_00520 PF04379 ApaG domain EML4058_00525 PF01053 Cys/Met metabolism PLP-dependent enzyme EML4058_00530 PF00692 dUTPase EML4058_00550 PF00589 Phage integrase family EML4058_00765 PF02469 Fasciclin domain EML4058_00785 PF00230 Major intrinsic protein EML4058_00830 PF00196 Bacterial regulatory proteins, luxR family EML4058_00830 PF00072 Response regulator receiver domain EML4058_00840 PF01180 Dihydroorotate dehydrogenase EML4058_00855 PF08241 Methyltransferase domain EML4058_00875 PF02082 Transcriptional regulator EML4058_00880 PF00271 Helicase conserved C-terminal domain EML4058_00880 PF08494 DEAD/H associated EML4058_00880 PF00270 DEAD/DEAH box helicase EML4058_00900 PF01925 Sulfite exporter TauE/SafE EML4058_00910 PF02770 Acyl-CoA dehydrogenase, middle domain EML4058_00910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EML4058_00910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EML4058_00910 PF12806 Acetyl-CoA dehydrogenase C-terminal like EML4058_00915 PF02803 Thiolase, C-terminal domain EML4058_00915 PF00108 Thiolase, N-terminal domain EML4058_00920 PF00378 Enoyl-CoA hydratase/isomerase EML4058_00920 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EML4058_00920 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EML4058_00940 PF03334 Na+/H+ antiporter subunit EML4058_00945 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EML4058_00950 PF01899 Na+/H+ ion antiporter subunit EML4058_00955 PF00361 Proton-conducting membrane transporter EML4058_00960 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EML4058_00965 PF00361 Proton-conducting membrane transporter EML4058_00965 PF13244 Domain of unknown function (DUF4040) EML4058_00965 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EML4058_00965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EML4058_00975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_00985 PF00072 Response regulator receiver domain EML4058_00990 PF01627 Hpt domain EML4058_00990 PF02895 Signal transducing histidine kinase, homodimeric domain EML4058_00990 PF01584 CheW-like domain EML4058_00990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_00995 PF03705 CheR methyltransferase, all-alpha domain EML4058_00995 PF01739 CheR methyltransferase, SAM binding domain EML4058_01000 PF01339 CheB methylesterase EML4058_01000 PF00072 Response regulator receiver domain EML4058_01005 PF00072 Response regulator receiver domain EML4058_01010 PF03975 CheD chemotactic sensory transduction EML4058_01020 PF01514 Secretory protein of YscJ/FliF family EML4058_01020 PF08345 Flagellar M-ring protein C-terminal EML4058_01025 PF03472 Autoinducer binding domain EML4058_01025 PF00196 Bacterial regulatory proteins, luxR family EML4058_01035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_01035 PF00672 HAMP domain EML4058_01040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_01040 PF01627 Hpt domain EML4058_01040 PF00672 HAMP domain EML4058_01040 PF00072 Response regulator receiver domain EML4058_01040 PF00512 His Kinase A (phospho-acceptor) domain EML4058_01045 PF01741 Large-conductance mechanosensitive channel, MscL EML4058_01050 PF00155 Aminotransferase class I and II EML4058_01055 PF01370 NAD dependent epimerase/dehydratase family EML4058_01065 PF03884 DNA gyrase inhibitor YacG EML4058_01070 PF02545 Maf-like protein EML4058_01075 PF01176 Translation initiation factor 1A / IF-1 EML4058_01085 PF06793 Uncharacterised protein family (UPF0262) EML4058_01090 PF00815 Histidinol dehydrogenase EML4058_01100 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EML4058_01115 PF00669 Bacterial flagellin N-terminal helical region EML4058_01115 PF00700 Bacterial flagellin C-terminal helical region EML4058_01120 PF00700 Bacterial flagellin C-terminal helical region EML4058_01120 PF00669 Bacterial flagellin N-terminal helical region EML4058_01130 PF00700 Bacterial flagellin C-terminal helical region EML4058_01130 PF00669 Bacterial flagellin N-terminal helical region EML4058_01135 PF00813 FliP family EML4058_01145 PF02107 Flagellar L-ring protein EML4058_01155 PF02119 Flagellar P-ring protein EML4058_01160 PF13144 Chaperone for flagella basal body P-ring formation EML4058_01165 PF00460 Flagella basal body rod protein EML4058_01165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EML4058_01170 PF02049 Flagellar hook-basal body complex protein FliE EML4058_01175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EML4058_01180 PF00460 Flagella basal body rod protein EML4058_01190 PF18269 T3SS EscN ATPase C-terminal domain EML4058_01190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EML4058_01195 PF00460 Flagella basal body rod protein EML4058_01195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EML4058_01205 PF01618 MotA/TolQ/ExbB proton channel family EML4058_01210 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EML4058_01215 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EML4058_01220 PF01706 FliG C-terminal domain EML4058_01220 PF14842 FliG N-terminal domain EML4058_01220 PF14841 FliG middle domain EML4058_01225 PF01312 FlhB HrpN YscU SpaS Family EML4058_01235 PF00700 Bacterial flagellin C-terminal helical region EML4058_01235 PF00669 Bacterial flagellin N-terminal helical region EML4058_01245 PF00691 OmpA family EML4058_01245 PF13677 Membrane MotB of proton-channel complex MotA/MotB EML4058_01255 PF02120 Flagellar hook-length control protein FliK EML4058_01265 PF00486 Transcriptional regulatory protein, C terminal EML4058_01270 PF00460 Flagella basal body rod protein EML4058_01270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EML4058_01270 PF07559 Flagellar basal body protein FlaE EML4058_01290 PF07378 Flagellar protein FlbT EML4058_01295 PF03963 Flagellar hook capping protein - N-terminal region EML4058_01300 PF01313 Bacterial export proteins, family 3 EML4058_01305 PF00771 FHIPEP family EML4058_01310 PF01311 Bacterial export proteins, family 1 EML4058_01345 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EML4058_01345 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EML4058_01350 PF00356 Bacterial regulatory proteins, lacI family EML4058_01355 PF01547 Bacterial extracellular solute-binding protein EML4058_01360 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_01365 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_01370 PF00128 Alpha amylase, catalytic domain EML4058_01375 PF03459 TOBE domain EML4058_01375 PF17912 MalK OB fold domain EML4058_01375 PF00005 ABC transporter EML4058_01390 PF00920 Dehydratase family EML4058_01395 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EML4058_01400 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EML4058_01400 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EML4058_01405 PF01266 FAD dependent oxidoreductase EML4058_01410 PF00120 Glutamine synthetase, catalytic domain EML4058_01430 PF00463 Isocitrate lyase family EML4058_01435 PF09856 Predicted transcriptional regulator (DUF2083) EML4058_01435 PF06114 IrrE N-terminal-like domain EML4058_01435 PF01381 Helix-turn-helix EML4058_01440 PF13416 Bacterial extracellular solute-binding protein EML4058_01445 PF08402 TOBE domain EML4058_01445 PF00005 ABC transporter EML4058_01450 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_01455 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_01465 PF00989 PAS fold EML4058_01465 PF13188 PAS domain EML4058_01465 PF13426 PAS domain EML4058_01465 PF00512 His Kinase A (phospho-acceptor) domain EML4058_01465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_01475 PF02541 Ppx/GppA phosphatase family EML4058_01480 PF01728 FtsJ-like methyltransferase EML4058_01485 PF07690 Major Facilitator Superfamily EML4058_01490 PF00753 Metallo-beta-lactamase superfamily EML4058_01495 PF00478 IMP dehydrogenase / GMP reductase domain EML4058_01495 PF00571 CBS domain EML4058_01505 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_01505 PF00107 Zinc-binding dehydrogenase EML4058_01510 PF01738 Dienelactone hydrolase family EML4058_01515 PF00512 His Kinase A (phospho-acceptor) domain EML4058_01515 PF00672 HAMP domain EML4058_01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_01520 PF00072 Response regulator receiver domain EML4058_01520 PF00486 Transcriptional regulatory protein, C terminal EML4058_01530 PF00994 Probable molybdopterin binding domain EML4058_01535 PF00288 GHMP kinases N terminal domain EML4058_01535 PF08544 GHMP kinases C terminal EML4058_01545 PF00348 Polyprenyl synthetase EML4058_01560 PF06965 Na+/H+ antiporter 1 EML4058_01560 PF01343 Peptidase family S49 EML4058_01570 PF02091 Glycyl-tRNA synthetase alpha subunit EML4058_01580 PF04011 LemA family EML4058_01585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EML4058_01595 PF05746 DALR anticodon binding domain EML4058_01595 PF02092 Glycyl-tRNA synthetase beta subunit EML4058_01600 PF04463 Protein of unknown function (DUF523) EML4058_01605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_01605 PF00672 HAMP domain EML4058_01615 PF02843 Phosphoribosylglycinamide synthetase, C domain EML4058_01615 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EML4058_01615 PF02844 Phosphoribosylglycinamide synthetase, N domain EML4058_01620 PF17674 HHH domain EML4058_01620 PF16921 Tex protein YqgF-like domain EML4058_01620 PF09371 Tex-like protein N-terminal domain EML4058_01620 PF00575 S1 RNA binding domain EML4058_01635 PF01040 UbiA prenyltransferase family EML4058_01650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_01650 PF03466 LysR substrate binding domain EML4058_01660 PF04107 Glutamate-cysteine ligase family 2(GCS2) EML4058_01665 PF04452 RNA methyltransferase EML4058_01670 PF01384 Phosphate transporter family EML4058_01680 PF05116 Sucrose-6F-phosphate phosphohydrolase EML4058_01685 PF00534 Glycosyl transferases group 1 EML4058_01685 PF13439 Glycosyltransferase Family 4 EML4058_01690 PF00392 Bacterial regulatory proteins, gntR family EML4058_01690 PF07729 FCD domain EML4058_01700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_01700 PF03466 LysR substrate binding domain EML4058_01705 PF01565 FAD binding domain EML4058_01705 PF02913 FAD linked oxidases, C-terminal domain EML4058_01710 PF01565 FAD binding domain EML4058_01710 PF02913 FAD linked oxidases, C-terminal domain EML4058_01715 PF13183 4Fe-4S dicluster domain EML4058_01715 PF02754 Cysteine-rich domain EML4058_01725 PF03734 L,D-transpeptidase catalytic domain EML4058_01725 PF17969 L,D-transpeptidase C-terminal domain EML4058_01730 PF13673 Acetyltransferase (GNAT) domain EML4058_01730 PF13302 Acetyltransferase (GNAT) domain EML4058_01730 PF00958 GMP synthase C terminal domain EML4058_01730 PF00117 Glutamine amidotransferase class-I EML4058_01730 PF03352 Methyladenine glycosylase EML4058_01740 PF03601 Conserved hypothetical protein 698 EML4058_01745 PF03466 LysR substrate binding domain EML4058_01745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_01765 PF03129 Anticodon binding domain EML4058_01765 PF13393 Histidyl-tRNA synthetase EML4058_01775 PF13393 Histidyl-tRNA synthetase EML4058_01780 PF01634 ATP phosphoribosyltransferase EML4058_01785 PF07681 DoxX EML4058_01795 PF00118 TCP-1/cpn60 chaperonin family EML4058_01800 PF00166 Chaperonin 10 Kd subunit EML4058_01810 PF01687 Riboflavin kinase EML4058_01810 PF06574 FAD synthetase EML4058_01815 PF08264 Anticodon-binding domain of tRNA EML4058_01815 PF00133 tRNA synthetases class I (I, L, M and V) EML4058_01825 PF14437 MafB19-like deaminase EML4058_01830 PF00849 RNA pseudouridylate synthase EML4058_01830 PF01479 S4 domain EML4058_01840 PF01734 Patatin-like phospholipase EML4058_01845 PF02254 TrkA-N domain EML4058_01845 PF00999 Sodium/hydrogen exchanger family EML4058_01850 PF01523 Putative modulator of DNA gyrase EML4058_01855 PF00459 Inositol monophosphatase family EML4058_01875 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EML4058_01885 PF08676 MutL C terminal dimerisation domain EML4058_01885 PF01119 DNA mismatch repair protein, C-terminal domain EML4058_01890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_01890 PF00512 His Kinase A (phospho-acceptor) domain EML4058_01890 PF09456 RcsC Alpha-Beta-Loop (ABL) EML4058_01890 PF00072 Response regulator receiver domain EML4058_01895 PF03707 Bacterial signalling protein N terminal repeat EML4058_01895 PF00990 Diguanylate cyclase, GGDEF domain EML4058_01895 PF00563 EAL domain EML4058_01895 PF13188 PAS domain EML4058_01900 PF08450 SMP-30/Gluconolactonase/LRE-like region EML4058_01905 PF01081 KDPG and KHG aldolase EML4058_01910 PF05035 2-keto-3-deoxy-galactonokinase EML4058_01925 PF00196 Bacterial regulatory proteins, luxR family EML4058_01925 PF03472 Autoinducer binding domain EML4058_01935 PF10609 NUBPL iron-transfer P-loop NTPase EML4058_01940 PF01544 CorA-like Mg2+ transporter protein EML4058_01945 PF02705 K+ potassium transporter EML4058_01955 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter EML4058_01960 PF00119 ATP synthase A chain EML4058_01965 PF00137 ATP synthase subunit C EML4058_01970 PF00430 ATP synthase B/B' CF(0) EML4058_01975 PF00430 ATP synthase B/B' CF(0) EML4058_01985 PF00132 Bacterial transferase hexapeptide (six repeats) EML4058_01990 PF01351 Ribonuclease HII EML4058_02005 PF01565 FAD binding domain EML4058_02005 PF02913 FAD linked oxidases, C-terminal domain EML4058_02010 PF03481 Putative GTP-binding controlling metal-binding EML4058_02010 PF01300 Telomere recombination EML4058_02020 PF00355 Rieske [2Fe-2S] domain EML4058_02020 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EML4058_02025 PF00175 Oxidoreductase NAD-binding domain EML4058_02025 PF00970 Oxidoreductase FAD-binding domain EML4058_02025 PF00111 2Fe-2S iron-sulfur cluster binding domain EML4058_02030 PF07886 BA14K-like protein EML4058_02035 PF07886 BA14K-like protein EML4058_02045 PF12806 Acetyl-CoA dehydrogenase C-terminal like EML4058_02045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EML4058_02045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EML4058_02045 PF02770 Acyl-CoA dehydrogenase, middle domain EML4058_02060 PF05958 tRNA (Uracil-5-)-methyltransferase EML4058_02065 PF01479 S4 domain EML4058_02065 PF01728 FtsJ-like methyltransferase EML4058_02070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_02070 PF00672 HAMP domain EML4058_02110 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EML4058_02110 PF02780 Transketolase, C-terminal domain EML4058_02110 PF02779 Transketolase, pyrimidine binding domain EML4058_02115 PF02678 Pirin EML4058_02115 PF05726 Pirin C-terminal cupin domain EML4058_02120 PF02609 Exonuclease VII small subunit EML4058_02125 PF00850 Histone deacetylase domain EML4058_02130 PF02632 BioY family EML4058_02135 PF02361 Cobalt transport protein EML4058_02140 PF00005 ABC transporter EML4058_02145 PF06224 Winged helix DNA-binding domain EML4058_02150 PF00925 GTP cyclohydrolase II EML4058_02150 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EML4058_02155 PF01264 Chorismate synthase EML4058_02170 PF00300 Histidine phosphatase superfamily (branch 1) EML4058_02180 PF01556 DnaJ C terminal domain EML4058_02180 PF00226 DnaJ domain EML4058_02180 PF00684 DnaJ central domain EML4058_02190 PF01243 Pyridoxamine 5'-phosphate oxidase EML4058_02190 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EML4058_02205 PF13419 Haloacid dehalogenase-like hydrolase EML4058_02215 PF01523 Putative modulator of DNA gyrase EML4058_02225 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EML4058_02225 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EML4058_02230 PF00115 Cytochrome C and Quinol oxidase polypeptide I EML4058_02235 PF01040 UbiA prenyltransferase family EML4058_02240 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EML4058_02245 PF00510 Cytochrome c oxidase subunit III EML4058_02255 PF02104 SURF1 family EML4058_02260 PF02401 LytB protein EML4058_02265 PF01636 Phosphotransferase enzyme family EML4058_02270 PF00075 RNase H EML4058_02285 PF00462 Glutaredoxin EML4058_02285 PF08534 Redoxin EML4058_02295 PF02622 Uncharacterized ACR, COG1678 EML4058_02305 PF15887 Putative zinc-binding metallo-peptidase EML4058_02305 PF10005 zinc-ribbon domain EML4058_02310 PF00563 EAL domain EML4058_02310 PF13185 GAF domain EML4058_02310 PF00990 Diguanylate cyclase, GGDEF domain EML4058_02315 PF13302 Acetyltransferase (GNAT) domain EML4058_02320 PF00675 Insulinase (Peptidase family M16) EML4058_02320 PF05193 Peptidase M16 inactive domain EML4058_02325 PF00291 Pyridoxal-phosphate dependent enzyme EML4058_02325 PF14821 Threonine synthase N terminus EML4058_02335 PF13419 Haloacid dehalogenase-like hydrolase EML4058_02340 PF00392 Bacterial regulatory proteins, gntR family EML4058_02340 PF07729 FCD domain EML4058_02355 PF01555 DNA methylase EML4058_02355 PF18755 Restriction Enzyme Adenine Methylase Associated EML4058_02370 PF14815 NUDIX domain EML4058_02370 PF00730 HhH-GPD superfamily base excision DNA repair protein EML4058_02380 PF13462 Thioredoxin EML4058_02385 PF02463 RecF/RecN/SMC N terminal domain EML4058_02390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EML4058_02395 PF02896 PEP-utilising enzyme, TIM barrel domain EML4058_02395 PF00391 PEP-utilising enzyme, mobile domain EML4058_02395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EML4058_02410 PF00375 Sodium:dicarboxylate symporter family EML4058_02440 PF06039 Malate:quinone oxidoreductase (Mqo) EML4058_02455 PF00009 Elongation factor Tu GTP binding domain EML4058_02460 PF01507 Phosphoadenosine phosphosulfate reductase family EML4058_02465 PF01507 Phosphoadenosine phosphosulfate reductase family EML4058_02470 PF02082 Transcriptional regulator EML4058_02480 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_02485 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_02490 PF00005 ABC transporter EML4058_02490 PF12857 TOBE-like domain EML4058_02495 PF16197 Ketoacyl-synthetase C-terminal extension EML4058_02495 PF00107 Zinc-binding dehydrogenase EML4058_02495 PF14765 Polyketide synthase dehydratase EML4058_02495 PF08659 KR domain EML4058_02495 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_02495 PF00109 Beta-ketoacyl synthase, N-terminal domain EML4058_02495 PF02801 Beta-ketoacyl synthase, C-terminal domain EML4058_02495 PF00698 Acyl transferase domain EML4058_02495 PF00550 Phosphopantetheine attachment site EML4058_02500 PF00563 EAL domain EML4058_02500 PF00989 PAS fold EML4058_02500 PF00990 Diguanylate cyclase, GGDEF domain EML4058_02500 PF01590 GAF domain EML4058_02510 PF00440 Bacterial regulatory proteins, tetR family EML4058_02510 PF13977 BetI-type transcriptional repressor, C-terminal EML4058_02515 PF00171 Aldehyde dehydrogenase family EML4058_02520 PF00732 GMC oxidoreductase EML4058_02520 PF05199 GMC oxidoreductase EML4058_02535 PF00654 Voltage gated chloride channel EML4058_02565 PF07690 Major Facilitator Superfamily EML4058_02575 PF04679 ATP dependent DNA ligase C terminal region EML4058_02575 PF01068 ATP dependent DNA ligase domain EML4058_02575 PF04675 DNA ligase N terminus EML4058_02585 PF04488 Glycosyltransferase sugar-binding region containing DXD motif EML4058_02590 PF00403 Heavy-metal-associated domain EML4058_02595 PF17969 L,D-transpeptidase C-terminal domain EML4058_02595 PF03734 L,D-transpeptidase catalytic domain EML4058_02600 PF17969 L,D-transpeptidase C-terminal domain EML4058_02600 PF03734 L,D-transpeptidase catalytic domain EML4058_02605 PF01047 MarR family EML4058_02610 PF02566 OsmC-like protein EML4058_02625 PF00005 ABC transporter EML4058_02625 PF12848 ABC transporter EML4058_02635 PF01047 MarR family EML4058_02655 PF03466 LysR substrate binding domain EML4058_02655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_02660 PF00106 short chain dehydrogenase EML4058_02675 PF05872 Bacterial protein of unknown function (DUF853) EML4058_02685 PF01638 HxlR-like helix-turn-helix EML4058_02690 PF00106 short chain dehydrogenase EML4058_02695 PF12833 Helix-turn-helix domain EML4058_02705 PF00248 Aldo/keto reductase family EML4058_02710 PF08279 HTH domain EML4058_02710 PF13280 WYL domain EML4058_02725 PF01063 Amino-transferase class IV EML4058_02730 PF00672 HAMP domain EML4058_02730 PF02203 Tar ligand binding domain homologue EML4058_02730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_02735 PF03466 LysR substrate binding domain EML4058_02735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_02750 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EML4058_02750 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EML4058_02760 PF08279 HTH domain EML4058_02760 PF13280 WYL domain EML4058_02765 PF01810 LysE type translocator EML4058_02770 PF01322 Cytochrome C' EML4058_02775 PF00034 Cytochrome c EML4058_02805 PF00376 MerR family regulatory protein EML4058_02805 PF09278 MerR, DNA binding EML4058_02815 PF02583 Metal-sensitive transcriptional repressor EML4058_02820 PF01545 Cation efflux family EML4058_02830 PF00005 ABC transporter EML4058_02830 PF00571 CBS domain EML4058_02835 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_02850 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EML4058_02850 PF00326 Prolyl oligopeptidase family EML4058_02860 PF00701 Dihydrodipicolinate synthetase family EML4058_02870 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EML4058_02870 PF12833 Helix-turn-helix domain EML4058_02870 PF02805 Metal binding domain of Ada EML4058_02870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EML4058_02880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EML4058_02900 PF03006 Haemolysin-III related EML4058_02910 PF01641 SelR domain EML4058_02915 PF00361 Proton-conducting membrane transporter EML4058_02915 PF13244 Domain of unknown function (DUF4040) EML4058_02915 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EML4058_02920 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EML4058_02925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EML4058_02930 PF00361 Proton-conducting membrane transporter EML4058_02935 PF01899 Na+/H+ ion antiporter subunit EML4058_02940 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EML4058_02945 PF03334 Na+/H+ antiporter subunit EML4058_02950 PF05443 ROS/MUCR transcriptional regulator protein EML4058_02965 PF02657 Fe-S metabolism associated domain EML4058_02970 PF17264 Family of unknown function (DUF5330) EML4058_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_02975 PF00512 His Kinase A (phospho-acceptor) domain EML4058_03010 PF01810 LysE type translocator EML4058_03015 PF03466 LysR substrate binding domain EML4058_03015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_03020 PF00144 Beta-lactamase EML4058_03030 PF00912 Transglycosylase EML4058_03030 PF00905 Penicillin binding protein transpeptidase domain EML4058_03035 PF03692 Putative zinc- or iron-chelating domain EML4058_03040 PF00905 Penicillin binding protein transpeptidase domain EML4058_03045 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ EML4058_03050 PF04221 RelB antitoxin EML4058_03060 PF00403 Heavy-metal-associated domain EML4058_03065 PF09278 MerR, DNA binding EML4058_03065 PF00376 MerR family regulatory protein EML4058_03080 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EML4058_03090 PF07690 Major Facilitator Superfamily EML4058_03100 PF08244 Glycosyl hydrolases family 32 C terminal EML4058_03100 PF00251 Glycosyl hydrolases family 32 N-terminal domain EML4058_03105 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EML4058_03115 PF01037 Lrp/AsnC ligand binding domain EML4058_03115 PF13404 AsnC-type helix-turn-helix domain EML4058_03155 PF04860 Phage portal protein EML4058_03255 PF00486 Transcriptional regulatory protein, C terminal EML4058_03255 PF00072 Response regulator receiver domain EML4058_03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_03275 PF03100 CcmE EML4058_03280 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EML4058_03280 PF01578 Cytochrome C assembly protein EML4058_03285 PF03918 Cytochrome C biogenesis protein EML4058_03290 PF13180 PDZ domain EML4058_03295 PF00072 Response regulator receiver domain EML4058_03295 PF00486 Transcriptional regulatory protein, C terminal EML4058_03300 PF00512 His Kinase A (phospho-acceptor) domain EML4058_03300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_03300 PF00672 HAMP domain EML4058_03305 PF06629 MltA-interacting protein MipA EML4058_03310 PF08335 GlnD PII-uridylyltransferase EML4058_03310 PF03710 Glutamate-ammonia ligase adenylyltransferase EML4058_03315 PF00989 PAS fold EML4058_03315 PF00512 His Kinase A (phospho-acceptor) domain EML4058_03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_03325 PF01433 Peptidase family M1 domain EML4058_03325 PF11940 Domain of unknown function (DUF3458) Ig-like fold EML4058_03325 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EML4058_03330 PF00892 EamA-like transporter family EML4058_03345 PF00012 Hsp70 protein EML4058_03350 PF03707 Bacterial signalling protein N terminal repeat EML4058_03350 PF00990 Diguanylate cyclase, GGDEF domain EML4058_03350 PF00563 EAL domain EML4058_03370 PF00440 Bacterial regulatory proteins, tetR family EML4058_03370 PF16925 Tetracyclin repressor-like, C-terminal domain EML4058_03385 PF00107 Zinc-binding dehydrogenase EML4058_03385 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_03390 PF01638 HxlR-like helix-turn-helix EML4058_03395 PF02673 Bacitracin resistance protein BacA EML4058_03400 PF01769 Divalent cation transporter EML4058_03400 PF03448 MgtE intracellular N domain EML4058_03400 PF00571 CBS domain EML4058_03405 PF07690 Major Facilitator Superfamily EML4058_03410 PF00781 Diacylglycerol kinase catalytic domain EML4058_03415 PF00202 Aminotransferase class-III EML4058_03430 PF09957 Bacterial antitoxin of type II TA system, VapB EML4058_03435 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus EML4058_03435 PF01048 Phosphorylase superfamily EML4058_03465 PF00155 Aminotransferase class I and II EML4058_03475 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_03475 PF14759 Reductase C-terminal EML4058_03480 PF03328 HpcH/HpaI aldolase/citrate lyase family EML4058_03505 PF02530 Porin subfamily EML4058_03510 PF02530 Porin subfamily EML4058_03515 PF14718 Soluble lytic murein transglycosylase L domain EML4058_03515 PF01464 Transglycosylase SLT domain EML4058_03520 PF00701 Dihydrodipicolinate synthetase family EML4058_03525 PF01668 SmpB protein EML4058_03530 PF00672 HAMP domain EML4058_03530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_03540 PF01192 RNA polymerase Rpb6 EML4058_03545 PF02824 TGS domain EML4058_03545 PF04607 Region found in RelA / SpoT proteins EML4058_03545 PF13291 ACT domain EML4058_03560 PF01648 4'-phosphopantetheinyl transferase superfamily EML4058_03565 PF10502 Signal peptidase, peptidase S26 EML4058_03570 PF00035 Double-stranded RNA binding motif EML4058_03570 PF14622 Ribonuclease-III-like EML4058_03575 PF01926 50S ribosome-binding GTPase EML4058_03575 PF07650 KH domain EML4058_03580 PF00027 Cyclic nucleotide-binding domain EML4058_03580 PF13545 Crp-like helix-turn-helix domain EML4058_03585 PF00072 Response regulator receiver domain EML4058_03590 PF11967 Recombination protein O N terminal EML4058_03590 PF02565 Recombination protein O C terminal EML4058_03595 PF07690 Major Facilitator Superfamily EML4058_03600 PF08241 Methyltransferase domain EML4058_03610 PF01966 HD domain EML4058_03620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EML4058_03630 PF00005 ABC transporter EML4058_03635 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_03640 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment EML4058_03645 PF00924 Mechanosensitive ion channel EML4058_03645 PF05552 Conserved TM helix EML4058_03655 PF01966 HD domain EML4058_03660 PF01571 Aminomethyltransferase folate-binding domain EML4058_03680 PF00293 NUDIX domain EML4058_03685 PF02694 Uncharacterised BCR, YnfA/UPF0060 family EML4058_03695 PF00072 Response regulator receiver domain EML4058_03695 PF00990 Diguanylate cyclase, GGDEF domain EML4058_03700 PF01066 CDP-alcohol phosphatidyltransferase EML4058_03705 PF02666 Phosphatidylserine decarboxylase EML4058_03710 PF00664 ABC transporter transmembrane region EML4058_03710 PF00005 ABC transporter EML4058_03715 PF01476 LysM domain EML4058_03720 PF03641 Possible lysine decarboxylase EML4058_03725 PF00905 Penicillin binding protein transpeptidase domain EML4058_03725 PF03717 Penicillin-binding Protein dimerisation domain EML4058_03730 PF00892 EamA-like transporter family EML4058_03735 PF00561 alpha/beta hydrolase fold EML4058_03750 PF04480 Protein of unknown function (DUF559) EML4058_03755 PF09190 DALR domain EML4058_03755 PF01406 tRNA synthetases class I (C) catalytic domain EML4058_03760 PF00106 short chain dehydrogenase EML4058_03765 PF13537 Glutamine amidotransferase domain EML4058_03765 PF00156 Phosphoribosyl transferase domain EML4058_03770 PF02674 Colicin V production protein EML4058_03775 PF18073 Rubredoxin metal binding domain EML4058_03775 PF06745 KaiC EML4058_03790 PF00842 Alanine racemase, C-terminal domain EML4058_03790 PF01168 Alanine racemase, N-terminal domain EML4058_03795 PF12852 Cupin EML4058_03795 PF12833 Helix-turn-helix domain EML4058_03800 PF03591 AzlC protein EML4058_03810 PF03796 DnaB-like helicase C terminal domain EML4058_03810 PF00772 DnaB-like helicase N terminal domain EML4058_03815 PF01047 MarR family EML4058_03825 PF13533 Biotin-lipoyl like EML4058_03830 PF01281 Ribosomal protein L9, N-terminal domain EML4058_03830 PF03948 Ribosomal protein L9, C-terminal domain EML4058_03840 PF01084 Ribosomal protein S18 EML4058_03845 PF01250 Ribosomal protein S6 EML4058_03850 PF00248 Aldo/keto reductase family EML4058_03855 PF00698 Acyl transferase domain EML4058_03865 PF00550 Phosphopantetheine attachment site EML4058_03870 PF02801 Beta-ketoacyl synthase, C-terminal domain EML4058_03870 PF00109 Beta-ketoacyl synthase, N-terminal domain EML4058_03875 PF02618 YceG-like family EML4058_03880 PF08340 Domain of unknown function (DUF1732) EML4058_03880 PF03755 YicC-like family, N-terminal region EML4058_03885 PF00625 Guanylate kinase EML4058_03890 PF01738 Dienelactone hydrolase family EML4058_03895 PF00398 Ribosomal RNA adenine dimethylase EML4058_03900 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EML4058_03910 PF03968 OstA-like protein EML4058_03910 PF04453 LPS transport system D EML4058_03925 PF00883 Cytosol aminopeptidase family, catalytic domain EML4058_03925 PF02789 Cytosol aminopeptidase family, N-terminal domain EML4058_03935 PF00990 Diguanylate cyclase, GGDEF domain EML4058_03935 PF00563 EAL domain EML4058_03935 PF03707 Bacterial signalling protein N terminal repeat EML4058_03940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_03945 PF00563 EAL domain EML4058_03945 PF00990 Diguanylate cyclase, GGDEF domain EML4058_03945 PF03707 Bacterial signalling protein N terminal repeat EML4058_03950 PF00989 PAS fold EML4058_03950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_03950 PF00512 His Kinase A (phospho-acceptor) domain EML4058_03955 PF00196 Bacterial regulatory proteins, luxR family EML4058_03955 PF00072 Response regulator receiver domain EML4058_03965 PF00005 ABC transporter EML4058_03965 PF12848 ABC transporter EML4058_03970 PF17158 Membrane-associated sensor, integral membrane domain EML4058_03970 PF00990 Diguanylate cyclase, GGDEF domain EML4058_03975 PF13417 Glutathione S-transferase, N-terminal domain EML4058_03980 PF00334 Nucleoside diphosphate kinase EML4058_04000 PF02391 MoaE protein EML4058_04005 PF02597 ThiS family EML4058_04010 PF01066 CDP-alcohol phosphatidyltransferase EML4058_04015 PF01541 GIY-YIG catalytic domain EML4058_04015 PF02151 UvrB/uvrC motif EML4058_04015 PF08459 UvrC Helix-hairpin-helix N-terminal EML4058_04025 PF13505 Outer membrane protein beta-barrel domain EML4058_04030 PF00043 Glutathione S-transferase, C-terminal domain EML4058_04030 PF13417 Glutathione S-transferase, N-terminal domain EML4058_04035 PF00445 Ribonuclease T2 family EML4058_04045 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EML4058_04050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EML4058_04050 PF00384 Molybdopterin oxidoreductase EML4058_04050 PF01568 Molydopterin dinucleotide binding domain EML4058_04055 PF00293 NUDIX domain EML4058_04065 PF00551 Formyl transferase EML4058_04070 PF02769 AIR synthase related protein, C-terminal domain EML4058_04070 PF00586 AIR synthase related protein, N-terminal domain EML4058_04075 PF01594 AI-2E family transporter EML4058_04085 PF13089 Polyphosphate kinase N-terminal domain EML4058_04085 PF13090 Polyphosphate kinase C-terminal domain 2 EML4058_04085 PF17941 Polyphosphate kinase C-terminal domain 1 EML4058_04085 PF02503 Polyphosphate kinase middle domain EML4058_04090 PF02541 Ppx/GppA phosphatase family EML4058_04095 PF00132 Bacterial transferase hexapeptide (six repeats) EML4058_04115 PF00211 Adenylate and Guanylate cyclase catalytic domain EML4058_04125 PF00570 HRDC domain EML4058_04125 PF01612 3'-5' exonuclease EML4058_04130 PF07690 Major Facilitator Superfamily EML4058_04135 PF01336 OB-fold nucleic acid binding domain EML4058_04135 PF02938 GAD domain EML4058_04135 PF00152 tRNA synthetases class II (D, K and N) EML4058_04145 PF06123 Inner membrane protein CreD EML4058_04150 PF01740 STAS domain EML4058_04150 PF00916 Sulfate permease family EML4058_04160 PF00521 DNA gyrase/topoisomerase IV, subunit A EML4058_04160 PF03989 DNA gyrase C-terminal domain, beta-propeller EML4058_04165 PF04376 Arginine-tRNA-protein transferase, N terminus EML4058_04165 PF04377 Arginine-tRNA-protein transferase, C terminus EML4058_04175 PF00490 Delta-aminolevulinic acid dehydratase EML4058_04195 PF00464 Serine hydroxymethyltransferase EML4058_04200 PF03477 ATP cone domain EML4058_04205 PF01872 RibD C-terminal domain EML4058_04205 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EML4058_04210 PF00677 Lumazine binding domain EML4058_04215 PF01810 LysE type translocator EML4058_04220 PF00885 6,7-dimethyl-8-ribityllumazine synthase EML4058_04225 PF01029 NusB family EML4058_04230 PF07690 Major Facilitator Superfamily EML4058_04235 PF03030 Inorganic H+ pyrophosphatase EML4058_04255 PF02504 Fatty acid synthesis protein EML4058_04260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EML4058_04260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EML4058_04265 PF00216 Bacterial DNA-binding protein EML4058_04270 PF13411 MerR HTH family regulatory protein EML4058_04345 PF00403 Heavy-metal-associated domain EML4058_04350 PF00175 Oxidoreductase NAD-binding domain EML4058_04350 PF00970 Oxidoreductase FAD-binding domain EML4058_04350 PF00111 2Fe-2S iron-sulfur cluster binding domain EML4058_04355 PF00376 MerR family regulatory protein EML4058_04355 PF09278 MerR, DNA binding EML4058_04360 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_04365 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_04365 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_04370 PF00005 ABC transporter EML4058_04370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_04375 PF00005 ABC transporter EML4058_04375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_04380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_04390 PF02386 Cation transport protein EML4058_04395 PF00291 Pyridoxal-phosphate dependent enzyme EML4058_04395 PF00585 C-terminal regulatory domain of Threonine dehydratase EML4058_04405 PF00072 Response regulator receiver domain EML4058_04405 PF00990 Diguanylate cyclase, GGDEF domain EML4058_04410 PF02525 Flavodoxin-like fold EML4058_04415 PF03466 LysR substrate binding domain EML4058_04415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_04420 PF02872 5'-nucleotidase, C-terminal domain EML4058_04420 PF00149 Calcineurin-like phosphoesterase EML4058_04445 PF00581 Rhodanese-like domain EML4058_04450 PF01411 tRNA synthetases class II (A) EML4058_04450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EML4058_04450 PF02272 DHHA1 domain EML4058_04455 PF00571 CBS domain EML4058_04455 PF00291 Pyridoxal-phosphate dependent enzyme EML4058_04460 PF03441 FAD binding domain of DNA photolyase EML4058_04460 PF00875 DNA photolyase EML4058_04470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EML4058_04470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EML4058_04500 PF06055 Exopolysaccharide synthesis, ExoD EML4058_04550 PF02397 Bacterial sugar transferase EML4058_04555 PF00534 Glycosyl transferases group 1 EML4058_04555 PF13439 Glycosyltransferase Family 4 EML4058_04580 PF02628 Cytochrome oxidase assembly protein EML4058_04585 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase EML4058_04590 PF01118 Semialdehyde dehydrogenase, NAD binding domain EML4058_04595 PF00491 Arginase family EML4058_04600 PF00380 Ribosomal protein S9/S16 EML4058_04605 PF00572 Ribosomal protein L13 EML4058_04615 PF13380 CoA binding domain EML4058_04620 PF01053 Cys/Met metabolism PLP-dependent enzyme EML4058_04645 PF00067 Cytochrome P450 EML4058_04650 PF00990 Diguanylate cyclase, GGDEF domain EML4058_04655 PF00574 Clp protease EML4058_04660 PF06689 ClpX C4-type zinc finger EML4058_04660 PF10431 C-terminal, D2-small domain, of ClpB protein EML4058_04660 PF07724 AAA domain (Cdc48 subfamily) EML4058_04665 PF00004 ATPase family associated with various cellular activities (AAA) EML4058_04665 PF02190 ATP-dependent protease La (LON) substrate-binding domain EML4058_04665 PF05362 Lon protease (S16) C-terminal proteolytic domain EML4058_04670 PF00216 Bacterial DNA-binding protein EML4058_04695 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EML4058_04700 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EML4058_04705 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EML4058_04715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EML4058_04730 PF10531 SLBB domain EML4058_04730 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EML4058_04730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EML4058_04735 PF00384 Molybdopterin oxidoreductase EML4058_04735 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EML4058_04735 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal EML4058_04740 PF00146 NADH dehydrogenase EML4058_04745 PF12838 4Fe-4S dicluster domain EML4058_04750 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EML4058_04755 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EML4058_04760 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EML4058_04760 PF00361 Proton-conducting membrane transporter EML4058_04765 PF00361 Proton-conducting membrane transporter EML4058_04765 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus EML4058_04770 PF00361 Proton-conducting membrane transporter EML4058_04775 PF08279 HTH domain EML4058_04775 PF02237 Biotin protein ligase C terminal domain EML4058_04775 PF03099 Biotin/lipoate A/B protein ligase family EML4058_04780 PF17770 Ribonuclease J C-terminal domain EML4058_04780 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EML4058_04780 PF12706 Beta-lactamase superfamily domain EML4058_04790 PF03129 Anticodon binding domain EML4058_04790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EML4058_04795 PF12704 MacB-like periplasmic core domain EML4058_04795 PF02687 FtsX-like permease family EML4058_04800 PF00005 ABC transporter EML4058_04805 PF14579 Helix-hairpin-helix motif EML4058_04805 PF02811 PHP domain EML4058_04805 PF07733 Bacterial DNA polymerase III alpha NTPase domain EML4058_04805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EML4058_04815 PF11799 impB/mucB/samB family C-terminal domain EML4058_04815 PF00817 impB/mucB/samB family EML4058_04825 PF00072 Response regulator receiver domain EML4058_04830 PF00072 Response regulator receiver domain EML4058_04830 PF00990 Diguanylate cyclase, GGDEF domain EML4058_04835 PF00471 Ribosomal protein L33 EML4058_04840 PF07690 Major Facilitator Superfamily EML4058_04855 PF17876 Cold shock domain EML4058_04855 PF00575 S1 RNA binding domain EML4058_04855 PF00773 RNB domain EML4058_04855 PF08206 Ribonuclease B OB domain EML4058_04855 PF08461 Ribonuclease R winged-helix domain EML4058_04860 PF01131 DNA topoisomerase EML4058_04860 PF01396 Topoisomerase DNA binding C4 zinc finger EML4058_04860 PF13368 Topoisomerase C-terminal repeat EML4058_04860 PF01751 Toprim domain EML4058_04870 PF02481 DNA recombination-mediator protein A EML4058_04870 PF17782 DprA winged helix domain EML4058_04875 PF02660 Glycerol-3-phosphate acyltransferase EML4058_04880 PF01979 Amidohydrolase family EML4058_04885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EML4058_04885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EML4058_04895 PF18158 Adaptive response protein AidB N-terminal domain EML4058_04895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EML4058_04895 PF02770 Acyl-CoA dehydrogenase, middle domain EML4058_04900 PF00583 Acetyltransferase (GNAT) family EML4058_04930 PF03652 Holliday junction resolvase EML4058_04935 PF03831 PhnA domain EML4058_04935 PF08274 PhnA Zinc-Ribbon EML4058_04945 PF02686 Glu-tRNAGln amidotransferase C subunit EML4058_04950 PF01425 Amidase EML4058_04955 PF00583 Acetyltransferase (GNAT) family EML4058_04955 PF13673 Acetyltransferase (GNAT) domain EML4058_04960 PF09857 Putative toxin of bacterial toxin-antitoxin pair EML4058_04975 PF02934 GatB/GatE catalytic domain EML4058_04975 PF02637 GatB domain EML4058_04985 PF00583 Acetyltransferase (GNAT) family EML4058_05000 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EML4058_05005 PF02785 Biotin carboxylase C-terminal domain EML4058_05005 PF00289 Biotin carboxylase, N-terminal domain EML4058_05005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EML4058_05010 PF00364 Biotin-requiring enzyme EML4058_05015 PF01220 Dehydroquinase class II EML4058_05020 PF06965 Na+/H+ antiporter 1 EML4058_05020 PF13462 Thioredoxin EML4058_05025 PF00155 Aminotransferase class I and II EML4058_05050 PF12111 Polyribonucleotide phosphorylase C terminal EML4058_05050 PF00575 S1 RNA binding domain EML4058_05050 PF10150 Ribonuclease E/G family EML4058_05060 PF01520 N-acetylmuramoyl-L-alanine amidase EML4058_05065 PF17092 Penicillin-binding protein OB-like domain EML4058_05065 PF00912 Transglycosylase EML4058_05065 PF00905 Penicillin binding protein transpeptidase domain EML4058_05085 PF01513 ATP-NAD kinase EML4058_05090 PF02567 Phenazine biosynthesis-like protein EML4058_05095 PF03764 Elongation factor G, domain IV EML4058_05095 PF00009 Elongation factor Tu GTP binding domain EML4058_05095 PF00679 Elongation factor G C-terminus EML4058_05110 PF00111 2Fe-2S iron-sulfur cluster binding domain EML4058_05120 PF00809 Pterin binding enzyme EML4058_05125 PF02152 Dihydroneopterin aldolase EML4058_05130 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EML4058_05140 PF05128 Domain of unknown function (DUF697) EML4058_05145 PF04317 YcjX-like family, DUF463 EML4058_05155 PF01258 Prokaryotic dksA/traR C4-type zinc finger EML4058_05170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_05170 PF00512 His Kinase A (phospho-acceptor) domain EML4058_05170 PF08448 PAS fold EML4058_05170 PF13188 PAS domain EML4058_05170 PF00072 Response regulator receiver domain EML4058_05175 PF02617 ATP-dependent Clp protease adaptor protein ClpS EML4058_05180 PF10431 C-terminal, D2-small domain, of ClpB protein EML4058_05180 PF02861 Clp amino terminal domain, pathogenicity island component EML4058_05180 PF17871 AAA lid domain EML4058_05180 PF07724 AAA domain (Cdc48 subfamily) EML4058_05180 PF00004 ATPase family associated with various cellular activities (AAA) EML4058_05195 PF03466 LysR substrate binding domain EML4058_05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_05205 PF01230 HIT domain EML4058_05230 PF00318 Ribosomal protein S2 EML4058_05235 PF00889 Elongation factor TS EML4058_05240 PF00696 Amino acid kinase family EML4058_05245 PF01765 Ribosome recycling factor EML4058_05250 PF01255 Putative undecaprenyl diphosphate synthase EML4058_05260 PF02163 Peptidase family M50 EML4058_05260 PF17820 PDZ domain EML4058_05265 PF01103 Surface antigen EML4058_05265 PF07244 Surface antigen variable number repeat EML4058_05270 PF00132 Bacterial transferase hexapeptide (six repeats) EML4058_05270 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EML4058_05275 PF07977 FabA-like domain EML4058_05280 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EML4058_05280 PF00132 Bacterial transferase hexapeptide (six repeats) EML4058_05285 PF17930 LpxI N-terminal domain EML4058_05285 PF06230 LpxI C-terminal domain EML4058_05290 PF02684 Lipid-A-disaccharide synthetase EML4058_05295 PF00392 Bacterial regulatory proteins, gntR family EML4058_05295 PF07729 FCD domain EML4058_05300 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_05305 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_05310 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_05315 PF00005 ABC transporter EML4058_05320 PF00285 Citrate synthase, C-terminal domain EML4058_05335 PF00717 Peptidase S24-like EML4058_05335 PF01726 LexA DNA binding domain EML4058_05340 PF00005 ABC transporter EML4058_05345 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_05350 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_05355 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_05360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EML4058_05360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_05365 PF08402 TOBE domain EML4058_05365 PF00005 ABC transporter EML4058_05370 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_05375 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_05380 PF01547 Bacterial extracellular solute-binding protein EML4058_05390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EML4058_05390 PF13378 Enolase C-terminal domain-like EML4058_05400 PF00107 Zinc-binding dehydrogenase EML4058_05400 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_05405 PF04115 Ureidoglycolate lyase EML4058_05410 PF00005 ABC transporter EML4058_05415 PF12399 Branched-chain amino acid ATP-binding cassette transporter EML4058_05415 PF00005 ABC transporter EML4058_05425 PF13458 Periplasmic binding protein EML4058_05430 PF12806 Acetyl-CoA dehydrogenase C-terminal like EML4058_05430 PF02770 Acyl-CoA dehydrogenase, middle domain EML4058_05430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EML4058_05430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EML4058_05435 PF00106 short chain dehydrogenase EML4058_05440 PF00501 AMP-binding enzyme EML4058_05440 PF07993 Male sterility protein EML4058_05440 PF00550 Phosphopantetheine attachment site EML4058_05445 PF00378 Enoyl-CoA hydratase/isomerase EML4058_05455 PF07729 FCD domain EML4058_05455 PF00392 Bacterial regulatory proteins, gntR family EML4058_05460 PF01571 Aminomethyltransferase folate-binding domain EML4058_05480 PF00793 DAHP synthetase I family EML4058_05485 PF03952 Enolase, N-terminal domain EML4058_05485 PF00113 Enolase, C-terminal TIM barrel domain EML4058_05495 PF00676 Dehydrogenase E1 component EML4058_05500 PF02779 Transketolase, pyrimidine binding domain EML4058_05500 PF02780 Transketolase, C-terminal domain EML4058_05500 PF00364 Biotin-requiring enzyme EML4058_05510 PF00364 Biotin-requiring enzyme EML4058_05510 PF02817 e3 binding domain EML4058_05510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EML4058_05520 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_05520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EML4058_05530 PF04055 Radical SAM superfamily EML4058_05530 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EML4058_05535 PF00892 EamA-like transporter family EML4058_05555 PF03364 Polyketide cyclase / dehydrase and lipid transport EML4058_05560 PF02464 Competence-damaged protein EML4058_05565 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EML4058_05565 PF02542 YgbB family EML4058_05570 PF01207 Dihydrouridine synthase (Dus) EML4058_05575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_05575 PF00512 His Kinase A (phospho-acceptor) domain EML4058_05575 PF00989 PAS fold EML4058_05580 PF00158 Sigma-54 interaction domain EML4058_05580 PF00072 Response regulator receiver domain EML4058_05580 PF02954 Bacterial regulatory protein, Fis family EML4058_05585 PF00512 His Kinase A (phospho-acceptor) domain EML4058_05585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_05585 PF00989 PAS fold EML4058_05585 PF00672 HAMP domain EML4058_05590 PF00072 Response regulator receiver domain EML4058_05590 PF00158 Sigma-54 interaction domain EML4058_05590 PF02954 Bacterial regulatory protein, Fis family EML4058_05595 PF02254 TrkA-N domain EML4058_05595 PF02080 TrkA-C domain EML4058_05600 PF17209 Hfq protein EML4058_05605 PF01926 50S ribosome-binding GTPase EML4058_05605 PF13167 GTP-binding GTPase N-terminal EML4058_05605 PF16360 GTP-binding GTPase Middle Region EML4058_05610 PF03819 MazG nucleotide pyrophosphohydrolase domain EML4058_05620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EML4058_05620 PF14824 Sirohaem biosynthesis protein central EML4058_05620 PF10414 Sirohaem synthase dimerisation region EML4058_05635 PF01795 MraW methylase family EML4058_05640 PF00970 Oxidoreductase FAD-binding domain EML4058_05640 PF00175 Oxidoreductase NAD-binding domain EML4058_05645 PF07690 Major Facilitator Superfamily EML4058_05660 PF02347 Glycine cleavage system P-protein EML4058_05665 PF01597 Glycine cleavage H-protein EML4058_05670 PF01571 Aminomethyltransferase folate-binding domain EML4058_05670 PF08669 Glycine cleavage T-protein C-terminal barrel domain EML4058_05695 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EML4058_05705 PF13419 Haloacid dehalogenase-like hydrolase EML4058_05720 PF01042 Endoribonuclease L-PSP EML4058_05725 PF00756 Putative esterase EML4058_05735 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EML4058_05745 PF10417 C-terminal domain of 1-Cys peroxiredoxin EML4058_05745 PF00578 AhpC/TSA family EML4058_05770 PF04542 Sigma-70 region 2 EML4058_05770 PF08281 Sigma-70, region 4 EML4058_05785 PF00665 Integrase core domain EML4058_05785 PF13936 Helix-turn-helix domain EML4058_05790 PF03358 NADPH-dependent FMN reductase EML4058_05795 PF03960 ArsC family EML4058_05800 PF01758 Sodium Bile acid symporter family EML4058_05815 PF00654 Voltage gated chloride channel EML4058_05820 PF12706 Beta-lactamase superfamily domain EML4058_05820 PF03099 Biotin/lipoate A/B protein ligase family EML4058_05825 PF01026 TatD related DNase EML4058_05830 PF08264 Anticodon-binding domain of tRNA EML4058_05830 PF09334 tRNA synthetases class I (M) EML4058_05835 PF09115 DNA polymerase III, delta subunit, C terminal EML4058_05840 PF02223 Thymidylate kinase EML4058_05845 PF07943 Penicillin-binding protein 5, C-terminal domain EML4058_05845 PF00768 D-alanyl-D-alanine carboxypeptidase EML4058_05850 PF03330 Lytic transglycolase EML4058_05850 PF05036 Sporulation related domain EML4058_05895 PF00521 DNA gyrase/topoisomerase IV, subunit A EML4058_05895 PF03989 DNA gyrase C-terminal domain, beta-propeller EML4058_05900 PF01914 MarC family integral membrane protein EML4058_05905 PF01743 Poly A polymerase head domain EML4058_05905 PF00571 CBS domain EML4058_05915 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH EML4058_05920 PF00436 Single-strand binding protein family EML4058_05925 PF17755 UvrA DNA-binding domain EML4058_05925 PF17760 UvrA interaction domain EML4058_05935 PF01207 Dihydrouridine synthase (Dus) EML4058_05940 PF01557 Fumarylacetoacetate (FAA) hydrolase family EML4058_05945 PF00132 Bacterial transferase hexapeptide (six repeats) EML4058_05955 PF00950 ABC 3 transport family EML4058_05960 PF00005 ABC transporter EML4058_05965 PF01297 Zinc-uptake complex component A periplasmic EML4058_05970 PF00356 Bacterial regulatory proteins, lacI family EML4058_05980 PF00248 Aldo/keto reductase family EML4058_05990 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EML4058_05990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EML4058_05995 PF03597 Cytochrome oxidase maturation protein cbb3-type EML4058_06005 PF05751 FixH EML4058_06010 PF13746 4Fe-4S dicluster domain EML4058_06010 PF12801 4Fe-4S binding domain EML4058_06010 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EML4058_06030 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EML4058_06030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EML4058_06045 PF00115 Cytochrome C and Quinol oxidase polypeptide I EML4058_06050 PF00916 Sulfate permease family EML4058_06050 PF01740 STAS domain EML4058_06060 PF00924 Mechanosensitive ion channel EML4058_06065 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EML4058_06080 PF09278 MerR, DNA binding EML4058_06080 PF00376 MerR family regulatory protein EML4058_06085 PF01769 Divalent cation transporter EML4058_06085 PF00571 CBS domain EML4058_06085 PF03448 MgtE intracellular N domain EML4058_06090 PF00384 Molybdopterin oxidoreductase EML4058_06100 PF01327 Polypeptide deformylase EML4058_06125 PF03099 Biotin/lipoate A/B protein ligase family EML4058_06130 PF00107 Zinc-binding dehydrogenase EML4058_06130 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_06155 PF02355 Protein export membrane protein EML4058_06155 PF07549 SecD/SecF GG Motif EML4058_06160 PF02699 Preprotein translocase subunit EML4058_06175 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_06175 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EML4058_06180 PF00440 Bacterial regulatory proteins, tetR family EML4058_06185 PF00067 Cytochrome P450 EML4058_06195 PF00132 Bacterial transferase hexapeptide (six repeats) EML4058_06195 PF06426 Serine acetyltransferase, N-terminal EML4058_06200 PF00561 alpha/beta hydrolase fold EML4058_06210 PF01494 FAD binding domain EML4058_06215 PF01053 Cys/Met metabolism PLP-dependent enzyme EML4058_06220 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_06225 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_06230 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_06235 PF00005 ABC transporter EML4058_06250 PF01368 DHH family EML4058_06250 PF02272 DHHA1 domain EML4058_06250 PF17768 RecJ OB domain EML4058_06260 PF00742 Homoserine dehydrogenase EML4058_06260 PF03447 Homoserine dehydrogenase, NAD binding domain EML4058_06260 PF01842 ACT domain EML4058_06265 PF00155 Aminotransferase class I and II EML4058_06270 PF01156 Inosine-uridine preferring nucleoside hydrolase EML4058_06275 PF01925 Sulfite exporter TauE/SafE EML4058_06290 PF00107 Zinc-binding dehydrogenase EML4058_06290 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_06295 PF00109 Beta-ketoacyl synthase, N-terminal domain EML4058_06295 PF02801 Beta-ketoacyl synthase, C-terminal domain EML4058_06305 PF07977 FabA-like domain EML4058_06310 PF00550 Phosphopantetheine attachment site EML4058_06315 PF04055 Radical SAM superfamily EML4058_06320 PF00027 Cyclic nucleotide-binding domain EML4058_06320 PF13545 Crp-like helix-turn-helix domain EML4058_06330 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus EML4058_06335 PF03749 Sugar fermentation stimulation protein RE domain EML4058_06335 PF17746 SfsA N-terminal OB domain EML4058_06340 PF00557 Metallopeptidase family M24 EML4058_06345 PF04002 RadC-like JAB domain EML4058_06360 PF01474 Class-II DAHP synthetase family EML4058_06365 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_06365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EML4058_06375 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EML4058_06380 PF13419 Haloacid dehalogenase-like hydrolase EML4058_06390 PF10415 Fumarase C C-terminus EML4058_06390 PF00206 Lyase EML4058_06400 PF06418 CTP synthase N-terminus EML4058_06400 PF00117 Glutamine amidotransferase class-I EML4058_06405 PF03840 Preprotein translocase SecG subunit EML4058_06410 PF00121 Triosephosphate isomerase EML4058_06420 PF01751 Toprim domain EML4058_06420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_06420 PF00204 DNA gyrase B EML4058_06420 PF00986 DNA gyrase B subunit, carboxyl terminus EML4058_06425 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_06430 PF16859 Tetracyclin repressor-like, C-terminal domain EML4058_06430 PF00440 Bacterial regulatory proteins, tetR family EML4058_06435 PF01209 ubiE/COQ5 methyltransferase family EML4058_06445 PF00574 Clp protease EML4058_06455 PF01022 Bacterial regulatory protein, arsR family EML4058_06460 PF13091 PLD-like domain EML4058_06465 PF00072 Response regulator receiver domain EML4058_06470 PF01266 FAD dependent oxidoreductase EML4058_06470 PF08669 Glycine cleavage T-protein C-terminal barrel domain EML4058_06470 PF01571 Aminomethyltransferase folate-binding domain EML4058_06470 PF16350 FAD dependent oxidoreductase central domain EML4058_06475 PF12795 Mechanosensitive ion channel porin domain EML4058_06475 PF12794 Mechanosensitive ion channel inner membrane domain 1 EML4058_06475 PF00924 Mechanosensitive ion channel EML4058_06535 PF00005 ABC transporter EML4058_06540 PF02405 Permease MlaE EML4058_06545 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EML4058_06545 PF13378 Enolase C-terminal domain-like EML4058_06560 PF03949 Malic enzyme, NAD binding domain EML4058_06560 PF00390 Malic enzyme, N-terminal domain EML4058_06560 PF01515 Phosphate acetyl/butaryl transferase EML4058_06570 PF00881 Nitroreductase family EML4058_06575 PF07676 WD40-like Beta Propeller Repeat EML4058_06580 PF00795 Carbon-nitrogen hydrolase EML4058_06580 PF02540 NAD synthase EML4058_06585 PF00884 Sulfatase EML4058_06595 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_06595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EML4058_06610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EML4058_06610 PF05697 Bacterial trigger factor protein (TF) EML4058_06610 PF05698 Bacterial trigger factor protein (TF) C-terminus EML4058_06630 PF01134 Glucose inhibited division protein A EML4058_06635 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_06635 PF00107 Zinc-binding dehydrogenase EML4058_06645 PF00550 Phosphopantetheine attachment site EML4058_06650 PF00668 Condensation domain EML4058_06650 PF13193 AMP-binding enzyme C-terminal domain EML4058_06650 PF00550 Phosphopantetheine attachment site EML4058_06650 PF00975 Thioesterase domain EML4058_06650 PF00501 AMP-binding enzyme EML4058_06655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EML4058_06655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EML4058_06670 PF00425 chorismate binding enzyme EML4058_06670 PF04715 Anthranilate synthase component I, N terminal region EML4058_06675 PF01702 Queuine tRNA-ribosyltransferase EML4058_06680 PF02547 Queuosine biosynthesis protein EML4058_06685 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EML4058_06690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EML4058_06695 PF01467 Cytidylyltransferase-like EML4058_06710 PF02885 Glycosyl transferase family, helical bundle domain EML4058_06710 PF00591 Glycosyl transferase family, a/b domain EML4058_06715 PF00218 Indole-3-glycerol phosphate synthase EML4058_06720 PF01967 MoaC family EML4058_06725 PF00994 Probable molybdopterin binding domain EML4058_06725 PF03453 MoeA N-terminal region (domain I and II) EML4058_06725 PF03454 MoeA C-terminal region (domain IV) EML4058_06730 PF00990 Diguanylate cyclase, GGDEF domain EML4058_06730 PF17158 Membrane-associated sensor, integral membrane domain EML4058_06740 PF00999 Sodium/hydrogen exchanger family EML4058_06740 PF02254 TrkA-N domain EML4058_06750 PF06463 Molybdenum Cofactor Synthesis C EML4058_06750 PF04055 Radical SAM superfamily EML4058_06755 PF00892 EamA-like transporter family EML4058_06760 PF07690 Major Facilitator Superfamily EML4058_06765 PF12804 MobA-like NTP transferase domain EML4058_06770 PF03205 Molybdopterin guanine dinucleotide synthesis protein B EML4058_06775 PF01551 Peptidase family M23 EML4058_06785 PF01975 Survival protein SurE EML4058_06790 PF02403 Seryl-tRNA synthetase N-terminal domain EML4058_06790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EML4058_06795 PF00902 Sec-independent protein translocase protein (TatC) EML4058_06800 PF02416 mttA/Hcf106 family EML4058_06805 PF02416 mttA/Hcf106 family EML4058_06810 PF04079 Segregation and condensation complex subunit ScpB EML4058_06815 PF02616 Segregation and condensation protein ScpA EML4058_06820 PF00933 Glycosyl hydrolase family 3 N terminal domain EML4058_06830 PF03485 Arginyl tRNA synthetase N terminal domain EML4058_06830 PF05746 DALR anticodon binding domain EML4058_06830 PF00750 tRNA synthetases class I (R) EML4058_06835 PF13286 Phosphohydrolase-associated domain EML4058_06835 PF01966 HD domain EML4058_06840 PF01521 Iron-sulphur cluster biosynthesis EML4058_06850 PF08238 Sel1 repeat EML4058_06865 PF00133 tRNA synthetases class I (I, L, M and V) EML4058_06865 PF10458 Valyl tRNA synthetase tRNA binding arm EML4058_06865 PF08264 Anticodon-binding domain of tRNA EML4058_06905 PF03358 NADPH-dependent FMN reductase EML4058_06910 PF18146 Damage-inducible protein CinA KH domain EML4058_06910 PF00994 Probable molybdopterin binding domain EML4058_06910 PF02464 Competence-damaged protein EML4058_06915 PF00582 Universal stress protein family EML4058_06920 PF00156 Phosphoribosyl transferase domain EML4058_06925 PF08471 Class II vitamin B12-dependent ribonucleotide reductase EML4058_06925 PF02867 Ribonucleotide reductase, barrel domain EML4058_06940 PF01566 Natural resistance-associated macrophage protein EML4058_06950 PF00005 ABC transporter EML4058_06950 PF00664 ABC transporter transmembrane region EML4058_06955 PF01594 AI-2E family transporter EML4058_06960 PF00583 Acetyltransferase (GNAT) family EML4058_06975 PF01613 Flavin reductase like domain EML4058_06990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EML4058_06990 PF03129 Anticodon binding domain EML4058_06990 PF02824 TGS domain EML4058_06990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EML4058_07000 PF01809 Putative membrane protein insertion efficiency factor EML4058_07010 PF01227 GTP cyclohydrolase I EML4058_07015 PF01502 Phosphoribosyl-AMP cyclohydrolase EML4058_07020 PF01734 Patatin-like phospholipase EML4058_07025 PF00571 CBS domain EML4058_07025 PF00478 IMP dehydrogenase / GMP reductase domain EML4058_07055 PF03313 Serine dehydratase alpha chain EML4058_07055 PF03315 Serine dehydratase beta chain EML4058_07090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_07090 PF03466 LysR substrate binding domain EML4058_07095 PF01965 DJ-1/PfpI family EML4058_07095 PF12833 Helix-turn-helix domain EML4058_07100 PF03853 YjeF-related protein N-terminus EML4058_07100 PF01256 Carbohydrate kinase EML4058_07105 PF00543 Nitrogen regulatory protein P-II EML4058_07110 PF03951 Glutamine synthetase, beta-Grasp domain EML4058_07110 PF00120 Glutamine synthetase, catalytic domain EML4058_07120 PF08755 Hemimethylated DNA-binding protein YccV like EML4058_07130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_07140 PF00892 EamA-like transporter family EML4058_07150 PF17757 UvrB interaction domain EML4058_07150 PF02559 CarD-like/TRCF domain EML4058_07150 PF00270 DEAD/DEAH box helicase EML4058_07150 PF03461 TRCF domain EML4058_07150 PF00271 Helicase conserved C-terminal domain EML4058_07160 PF17191 RecG wedge domain EML4058_07160 PF00271 Helicase conserved C-terminal domain EML4058_07160 PF00270 DEAD/DEAH box helicase EML4058_07170 PF05016 ParE toxin of type II toxin-antitoxin system, parDE EML4058_07175 PF01402 Ribbon-helix-helix protein, copG family EML4058_07190 PF01380 SIS domain EML4058_07195 PF00132 Bacterial transferase hexapeptide (six repeats) EML4058_07195 PF14602 Hexapeptide repeat of succinyl-transferase EML4058_07195 PF12804 MobA-like NTP transferase domain EML4058_07200 PF00392 Bacterial regulatory proteins, gntR family EML4058_07200 PF07729 FCD domain EML4058_07205 PF02608 ABC transporter substrate-binding protein PnrA-like EML4058_07210 PF02653 Branched-chain amino acid transport system / permease component EML4058_07215 PF02653 Branched-chain amino acid transport system / permease component EML4058_07220 PF00005 ABC transporter EML4058_07230 PF01494 FAD binding domain EML4058_07235 PF03547 Membrane transport protein EML4058_07240 PF02683 Cytochrome C biogenesis protein transmembrane region EML4058_07270 PF00313 'Cold-shock' DNA-binding domain EML4058_07325 PF00561 alpha/beta hydrolase fold EML4058_07340 PF12704 MacB-like periplasmic core domain EML4058_07340 PF02687 FtsX-like permease family EML4058_07340 PF00005 ABC transporter EML4058_07345 PF00005 ABC transporter EML4058_07345 PF02687 FtsX-like permease family EML4058_07345 PF12704 MacB-like periplasmic core domain EML4058_07355 PF01521 Iron-sulphur cluster biosynthesis EML4058_07360 PF01883 Iron-sulfur cluster assembly protein EML4058_07365 PF00266 Aminotransferase class-V EML4058_07370 PF01458 Uncharacterized protein family (UPF0051) EML4058_07375 PF00005 ABC transporter EML4058_07380 PF01458 Uncharacterized protein family (UPF0051) EML4058_07385 PF00266 Aminotransferase class-V EML4058_07390 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EML4058_07395 PF03702 Anhydro-N-acetylmuramic acid kinase EML4058_07400 PF00579 tRNA synthetases class I (W and Y) EML4058_07410 PF00578 AhpC/TSA family EML4058_07415 PF04305 Protein of unknown function (DUF455) EML4058_07420 PF01476 LysM domain EML4058_07420 PF01551 Peptidase family M23 EML4058_07420 PF08525 Opacity-associated protein A N-terminal motif EML4058_07425 PF00271 Helicase conserved C-terminal domain EML4058_07425 PF00270 DEAD/DEAH box helicase EML4058_07445 PF00834 Ribulose-phosphate 3 epimerase family EML4058_07455 PF10397 Adenylosuccinate lyase C-terminus EML4058_07455 PF00206 Lyase EML4058_07465 PF01259 SAICAR synthetase EML4058_07470 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase EML4058_07490 PF00155 Aminotransferase class I and II EML4058_07490 PF00392 Bacterial regulatory proteins, gntR family EML4058_07500 PF00586 AIR synthase related protein, N-terminal domain EML4058_07500 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EML4058_07500 PF02769 AIR synthase related protein, C-terminal domain EML4058_07520 PF00462 Glutaredoxin EML4058_07525 PF07690 Major Facilitator Superfamily EML4058_07530 PF00459 Inositol monophosphatase family EML4058_07535 PF00459 Inositol monophosphatase family EML4058_07540 PF01171 PP-loop family EML4058_07545 PF04960 Glutaminase EML4058_07550 PF01479 S4 domain EML4058_07550 PF00163 Ribosomal protein S4/S9 N-terminal domain EML4058_07555 PF03741 Integral membrane protein TerC family EML4058_07565 PF00892 EamA-like transporter family EML4058_07570 PF01810 LysE type translocator EML4058_07580 PF01177 Asp/Glu/Hydantoin racemase EML4058_07585 PF00588 SpoU rRNA Methylase family EML4058_07595 PF00180 Isocitrate/isopropylmalate dehydrogenase EML4058_07610 PF02272 DHHA1 domain EML4058_07610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EML4058_07610 PF01411 tRNA synthetases class II (A) EML4058_07615 PF00154 recA bacterial DNA recombination protein EML4058_07620 PF00294 pfkB family carbohydrate kinase EML4058_07625 PF04227 Indigoidine synthase A like protein EML4058_07630 PF00691 OmpA family EML4058_07630 PF01389 OmpA-like transmembrane domain EML4058_07635 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_07640 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_07645 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_07650 PF06233 Usg-like family EML4058_07655 PF08241 Methyltransferase domain EML4058_07660 PF09084 NMT1/THI5 like EML4058_07665 PF13404 AsnC-type helix-turn-helix domain EML4058_07665 PF01037 Lrp/AsnC ligand binding domain EML4058_07670 PF03167 Uracil DNA glycosylase superfamily EML4058_07680 PF00989 PAS fold EML4058_07680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_07680 PF00512 His Kinase A (phospho-acceptor) domain EML4058_07685 PF01219 Prokaryotic diacylglycerol kinase EML4058_07690 PF02277 Phosphoribosyltransferase EML4058_07695 PF02654 Cobalamin-5-phosphate synthase EML4058_07710 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EML4058_07720 PF00005 ABC transporter EML4058_07725 PF13407 Periplasmic binding protein domain EML4058_07730 PF02653 Branched-chain amino acid transport system / permease component EML4058_07735 PF00456 Transketolase, thiamine diphosphate binding domain EML4058_07740 PF02780 Transketolase, C-terminal domain EML4058_07740 PF02779 Transketolase, pyrimidine binding domain EML4058_07745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EML4058_07745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EML4058_07750 PF04198 Putative sugar-binding domain EML4058_07755 PF00106 short chain dehydrogenase EML4058_07760 PF01061 ABC-2 type transporter EML4058_07765 PF00005 ABC transporter EML4058_07780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_07780 PF08269 Cache domain EML4058_07790 PF16193 AAA C-terminal domain EML4058_07790 PF12002 MgsA AAA+ ATPase C terminal EML4058_07790 PF00004 ATPase family associated with various cellular activities (AAA) EML4058_07795 PF00595 PDZ domain EML4058_07795 PF13180 PDZ domain EML4058_07810 PF00920 Dehydratase family EML4058_07815 PF00174 Oxidoreductase molybdopterin binding domain EML4058_07820 PF01794 Ferric reductase like transmembrane component EML4058_07830 PF05675 Protein of unknown function (DUF817) EML4058_07835 PF01196 Ribosomal protein L17 EML4058_07840 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EML4058_07840 PF01000 RNA polymerase Rpb3/RpoA insert domain EML4058_07840 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EML4058_07845 PF00411 Ribosomal protein S11 EML4058_07850 PF00416 Ribosomal protein S13/S18 EML4058_07860 PF00344 SecY translocase EML4058_07865 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EML4058_07870 PF00327 Ribosomal protein L30p/L7e EML4058_07875 PF03719 Ribosomal protein S5, C-terminal domain EML4058_07875 PF00333 Ribosomal protein S5, N-terminal domain EML4058_07880 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EML4058_07885 PF00347 Ribosomal protein L6 EML4058_07890 PF00410 Ribosomal protein S8 EML4058_07895 PF00253 Ribosomal protein S14p/S29e EML4058_07900 PF00281 Ribosomal protein L5 EML4058_07900 PF00673 ribosomal L5P family C-terminus EML4058_07905 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EML4058_07905 PF00467 KOW motif EML4058_07910 PF00238 Ribosomal protein L14p/L23e EML4058_07915 PF00366 Ribosomal protein S17 EML4058_07920 PF00831 Ribosomal L29 protein EML4058_07925 PF00252 Ribosomal protein L16p/L10e EML4058_07930 PF07650 KH domain EML4058_07930 PF00189 Ribosomal protein S3, C-terminal domain EML4058_07935 PF00237 Ribosomal protein L22p/L17e EML4058_07940 PF00203 Ribosomal protein S19 EML4058_07945 PF00181 Ribosomal Proteins L2, RNA binding domain EML4058_07945 PF03947 Ribosomal Proteins L2, C-terminal domain EML4058_07950 PF00276 Ribosomal protein L23 EML4058_07955 PF00573 Ribosomal protein L4/L1 family EML4058_07960 PF00297 Ribosomal protein L3 EML4058_07965 PF00338 Ribosomal protein S10p/S20e EML4058_07970 PF03144 Elongation factor Tu domain 2 EML4058_07970 PF03143 Elongation factor Tu C-terminal domain EML4058_07970 PF00009 Elongation factor Tu GTP binding domain EML4058_07975 PF03144 Elongation factor Tu domain 2 EML4058_07975 PF03764 Elongation factor G, domain IV EML4058_07975 PF14492 Elongation Factor G, domain II EML4058_07975 PF00679 Elongation factor G C-terminus EML4058_07975 PF00009 Elongation factor Tu GTP binding domain EML4058_07980 PF00177 Ribosomal protein S7p/S5e EML4058_07985 PF00164 Ribosomal protein S12/S23 EML4058_08005 PF04997 RNA polymerase Rpb1, domain 1 EML4058_08005 PF00623 RNA polymerase Rpb1, domain 2 EML4058_08005 PF04983 RNA polymerase Rpb1, domain 3 EML4058_08005 PF05000 RNA polymerase Rpb1, domain 4 EML4058_08005 PF04998 RNA polymerase Rpb1, domain 5 EML4058_08010 PF04560 RNA polymerase Rpb2, domain 7 EML4058_08010 PF04561 RNA polymerase Rpb2, domain 2 EML4058_08010 PF04565 RNA polymerase Rpb2, domain 3 EML4058_08010 PF10385 RNA polymerase beta subunit external 1 domain EML4058_08010 PF04563 RNA polymerase beta subunit EML4058_08010 PF00562 RNA polymerase Rpb2, domain 6 EML4058_08015 PF00542 Ribosomal protein L7/L12 C-terminal domain EML4058_08015 PF16320 Ribosomal protein L7/L12 dimerisation domain EML4058_08020 PF00466 Ribosomal protein L10 EML4058_08025 PF00687 Ribosomal protein L1p/L10e family EML4058_08030 PF00298 Ribosomal protein L11, RNA binding domain EML4058_08030 PF03946 Ribosomal protein L11, N-terminal domain EML4058_08035 PF02357 Transcription termination factor nusG EML4058_08035 PF00467 KOW motif EML4058_08040 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EML4058_08050 PF08485 Polysaccharide biosynthesis protein C-terminal EML4058_08050 PF02719 Polysaccharide biosynthesis protein EML4058_08055 PF00009 Elongation factor Tu GTP binding domain EML4058_08055 PF03144 Elongation factor Tu domain 2 EML4058_08055 PF03143 Elongation factor Tu C-terminal domain EML4058_08060 PF03741 Integral membrane protein TerC family EML4058_08065 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme EML4058_08095 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_08095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EML4058_08120 PF04545 Sigma-70, region 4 EML4058_08120 PF04542 Sigma-70 region 2 EML4058_08130 PF00158 Sigma-54 interaction domain EML4058_08130 PF00072 Response regulator receiver domain EML4058_08130 PF02954 Bacterial regulatory protein, Fis family EML4058_08135 PF00072 Response regulator receiver domain EML4058_08135 PF08769 Sporulation initiation factor Spo0A C terminal EML4058_08140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_08140 PF00072 Response regulator receiver domain EML4058_08140 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_08140 PF01627 Hpt domain EML4058_08140 PF00512 His Kinase A (phospho-acceptor) domain EML4058_08145 PF00072 Response regulator receiver domain EML4058_08150 PF13426 PAS domain EML4058_08150 PF08447 PAS fold EML4058_08150 PF07536 HWE histidine kinase EML4058_08155 PF00072 Response regulator receiver domain EML4058_08160 PF01590 GAF domain EML4058_08160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_08160 PF00512 His Kinase A (phospho-acceptor) domain EML4058_08160 PF08446 PAS fold EML4058_08160 PF00360 Phytochrome region EML4058_08175 PF08032 RNA 2'-O ribose methyltransferase substrate binding EML4058_08175 PF00588 SpoU rRNA Methylase family EML4058_08180 PF03061 Thioesterase superfamily EML4058_08205 PF13460 NAD(P)H-binding EML4058_08210 PF01638 HxlR-like helix-turn-helix EML4058_08215 PF02151 UvrB/uvrC motif EML4058_08215 PF00271 Helicase conserved C-terminal domain EML4058_08215 PF17757 UvrB interaction domain EML4058_08215 PF04851 Type III restriction enzyme, res subunit EML4058_08215 PF12344 Ultra-violet resistance protein B EML4058_08220 PF00756 Putative esterase EML4058_08220 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EML4058_08240 PF01556 DnaJ C terminal domain EML4058_08240 PF00684 DnaJ central domain EML4058_08240 PF00226 DnaJ domain EML4058_08255 PF17151 Periplasmic sensor domain EML4058_08255 PF00990 Diguanylate cyclase, GGDEF domain EML4058_08265 PF00005 ABC transporter EML4058_08265 PF08402 TOBE domain EML4058_08275 PF01547 Bacterial extracellular solute-binding protein EML4058_08280 PF00155 Aminotransferase class I and II EML4058_08285 PF05025 RbsD / FucU transport protein family EML4058_08290 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system EML4058_08300 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EML4058_08300 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EML4058_08310 PF12833 Helix-turn-helix domain EML4058_08310 PF06719 AraC-type transcriptional regulator N-terminus EML4058_08315 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_08315 PF00107 Zinc-binding dehydrogenase EML4058_08320 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_08325 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EML4058_08330 PF03472 Autoinducer binding domain EML4058_08330 PF00196 Bacterial regulatory proteins, luxR family EML4058_08335 PF14490 Helix-hairpin-helix containing domain EML4058_08335 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain EML4058_08335 PF13538 UvrD-like helicase C-terminal domain EML4058_08355 PF04542 Sigma-70 region 2 EML4058_08355 PF08281 Sigma-70, region 4 EML4058_08365 PF00248 Aldo/keto reductase family EML4058_08380 PF10369 Small subunit of acetolactate synthase EML4058_08385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EML4058_08385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EML4058_08385 PF00205 Thiamine pyrophosphate enzyme, central domain EML4058_08405 PF13302 Acetyltransferase (GNAT) domain EML4058_08415 PF13180 PDZ domain EML4058_08420 PF01145 SPFH domain / Band 7 family EML4058_08425 PF01145 SPFH domain / Band 7 family EML4058_08430 PF00186 Dihydrofolate reductase EML4058_08435 PF00303 Thymidylate synthase EML4058_08470 PF02913 FAD linked oxidases, C-terminal domain EML4058_08470 PF01565 FAD binding domain EML4058_08475 PF00873 AcrB/AcrD/AcrF family EML4058_08480 PF13533 Biotin-lipoyl like EML4058_08490 PF13361 UvrD-like helicase C-terminal domain EML4058_08490 PF00580 UvrD/REP helicase N-terminal domain EML4058_08500 PF00440 Bacterial regulatory proteins, tetR family EML4058_08500 PF13977 BetI-type transcriptional repressor, C-terminal EML4058_08505 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EML4058_08510 PF00561 alpha/beta hydrolase fold EML4058_08530 PF00857 Isochorismatase family EML4058_08550 PF01321 Creatinase/Prolidase N-terminal domain EML4058_08550 PF00557 Metallopeptidase family M24 EML4058_08565 PF02630 SCO1/SenC EML4058_08575 PF01584 CheW-like domain EML4058_08585 PF00929 Exonuclease EML4058_08590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_08590 PF03466 LysR substrate binding domain EML4058_08600 PF00583 Acetyltransferase (GNAT) family EML4058_08605 PF01636 Phosphotransferase enzyme family EML4058_08610 PF01653 NAD-dependent DNA ligase adenylation domain EML4058_08610 PF12826 Helix-hairpin-helix motif EML4058_08610 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EML4058_08610 PF03120 NAD-dependent DNA ligase OB-fold domain EML4058_08610 PF00533 BRCA1 C Terminus (BRCT) domain EML4058_08615 PF02463 RecF/RecN/SMC N terminal domain EML4058_08620 PF13525 Outer membrane lipoprotein EML4058_08625 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EML4058_08630 PF12327 FtsZ family, C-terminal domain EML4058_08630 PF00091 Tubulin/FtsZ family, GTPase domain EML4058_08635 PF02491 SHS2 domain inserted in FTSA EML4058_08640 PF03799 Cell division protein FtsQ EML4058_08640 PF08478 POTRA domain, FtsQ-type EML4058_08645 PF01820 D-ala D-ala ligase N-terminus EML4058_08645 PF07478 D-ala D-ala ligase C-terminus EML4058_08650 PF07690 Major Facilitator Superfamily EML4058_08650 PF00083 Sugar (and other) transporter EML4058_08655 PF03707 Bacterial signalling protein N terminal repeat EML4058_08655 PF00990 Diguanylate cyclase, GGDEF domain EML4058_08655 PF00563 EAL domain EML4058_08655 PF13188 PAS domain EML4058_08660 PF01565 FAD binding domain EML4058_08660 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EML4058_08665 PF01225 Mur ligase family, catalytic domain EML4058_08665 PF02875 Mur ligase family, glutamate ligase domain EML4058_08665 PF08245 Mur ligase middle domain EML4058_08670 PF03033 Glycosyltransferase family 28 N-terminal domain EML4058_08670 PF04101 Glycosyltransferase family 28 C-terminal domain EML4058_08675 PF01098 Cell cycle protein EML4058_08680 PF08245 Mur ligase middle domain EML4058_08680 PF02875 Mur ligase family, glutamate ligase domain EML4058_08685 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EML4058_08685 PF00953 Glycosyl transferase family 4 EML4058_08690 PF02875 Mur ligase family, glutamate ligase domain EML4058_08690 PF01225 Mur ligase family, catalytic domain EML4058_08690 PF08245 Mur ligase middle domain EML4058_08695 PF01225 Mur ligase family, catalytic domain EML4058_08695 PF02875 Mur ligase family, glutamate ligase domain EML4058_08695 PF08245 Mur ligase middle domain EML4058_08700 PF03717 Penicillin-binding Protein dimerisation domain EML4058_08700 PF00905 Penicillin binding protein transpeptidase domain EML4058_08710 PF01795 MraW methylase family EML4058_08715 PF02381 MraZ protein, putative antitoxin-like EML4058_08720 PF03994 Domain of Unknown Function (DUF350) EML4058_08735 PF13276 HTH-like domain EML4058_08735 PF01527 Transposase EML4058_08735 PF00665 Integrase core domain EML4058_08735 PF13333 Integrase core domain EML4058_08765 PF01510 N-acetylmuramoyl-L-alanine amidase EML4058_08770 PF05099 Tellurite resistance protein TerB EML4058_08770 PF00226 DnaJ domain EML4058_08775 PF00365 Phosphofructokinase EML4058_08795 PF13649 Methyltransferase domain EML4058_08800 PF01183 Glycosyl hydrolases family 25 EML4058_08810 PF02219 Methylenetetrahydrofolate reductase EML4058_08815 PF01209 ubiE/COQ5 methyltransferase family EML4058_08820 PF12848 ABC transporter EML4058_08820 PF00005 ABC transporter EML4058_08825 PF12146 Serine aminopeptidase, S33 EML4058_08830 PF02515 CoA-transferase family III EML4058_08835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EML4058_08835 PF00205 Thiamine pyrophosphate enzyme, central domain EML4058_08835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EML4058_08845 PF01042 Endoribonuclease L-PSP EML4058_08860 PF03734 L,D-transpeptidase catalytic domain EML4058_08860 PF01476 LysM domain EML4058_08865 PF07690 Major Facilitator Superfamily EML4058_08875 PF10609 NUBPL iron-transfer P-loop NTPase EML4058_08885 PF00465 Iron-containing alcohol dehydrogenase EML4058_08890 PF00171 Aldehyde dehydrogenase family EML4058_08905 PF03951 Glutamine synthetase, beta-Grasp domain EML4058_08905 PF00120 Glutamine synthetase, catalytic domain EML4058_08910 PF13520 Amino acid permease EML4058_08920 PF01418 Helix-turn-helix domain, rpiR family EML4058_08920 PF01380 SIS domain EML4058_08940 PF08402 TOBE domain EML4058_08940 PF00005 ABC transporter EML4058_08945 PF00107 Zinc-binding dehydrogenase EML4058_08945 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_08960 PF07690 Major Facilitator Superfamily EML4058_08965 PF00809 Pterin binding enzyme EML4058_08965 PF02965 Vitamin B12 dependent methionine synthase, activation domain EML4058_08965 PF02607 B12 binding domain EML4058_08965 PF02310 B12 binding domain EML4058_08965 PF02574 Homocysteine S-methyltransferase EML4058_08985 PF13505 Outer membrane protein beta-barrel domain EML4058_09000 PF04402 Protein of unknown function (DUF541) EML4058_09010 PF01894 Uncharacterised protein family UPF0047 EML4058_09015 PF00360 Phytochrome region EML4058_09015 PF01590 GAF domain EML4058_09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_09015 PF00512 His Kinase A (phospho-acceptor) domain EML4058_09015 PF08446 PAS fold EML4058_09025 PF03979 Sigma-70 factor, region 1.1 EML4058_09025 PF00140 Sigma-70 factor, region 1.2 EML4058_09025 PF04542 Sigma-70 region 2 EML4058_09025 PF04539 Sigma-70 region 3 EML4058_09025 PF04545 Sigma-70, region 4 EML4058_09025 PF04546 Sigma-70, non-essential region EML4058_09030 PF10410 DnaB-helicase binding domain of primase EML4058_09030 PF08278 DNA primase DnaG DnaB-binding EML4058_09030 PF01807 CHC2 zinc finger EML4058_09030 PF08275 DNA primase catalytic core, N-terminal domain EML4058_09040 PF00117 Glutamine amidotransferase class-I EML4058_09040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EML4058_09050 PF00561 alpha/beta hydrolase fold EML4058_09055 PF01554 MatE EML4058_09060 PF00672 HAMP domain EML4058_09060 PF02743 Cache domain EML4058_09060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_09070 PF04228 Putative neutral zinc metallopeptidase EML4058_09085 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EML4058_09085 PF02142 MGS-like domain EML4058_09085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EML4058_09095 PF00990 Diguanylate cyclase, GGDEF domain EML4058_09095 PF07694 5TMR of 5TMR-LYT EML4058_09110 PF01272 Transcription elongation factor, GreA/GreB, C-term EML4058_09110 PF03449 Transcription elongation factor, N-terminal EML4058_09115 PF00534 Glycosyl transferases group 1 EML4058_09120 PF01037 Lrp/AsnC ligand binding domain EML4058_09125 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_09130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_09130 PF03466 LysR substrate binding domain EML4058_09140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EML4058_09155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_09155 PF03466 LysR substrate binding domain EML4058_09165 PF01699 Sodium/calcium exchanger protein EML4058_09170 PF00155 Aminotransferase class I and II EML4058_09175 PF00563 EAL domain EML4058_09175 PF05231 MASE1 EML4058_09190 PF00313 'Cold-shock' DNA-binding domain EML4058_09195 PF00753 Metallo-beta-lactamase superfamily EML4058_09205 PF12802 MarR family EML4058_09210 PF00486 Transcriptional regulatory protein, C terminal EML4058_09210 PF00072 Response regulator receiver domain EML4058_09215 PF00672 HAMP domain EML4058_09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_09215 PF00512 His Kinase A (phospho-acceptor) domain EML4058_09215 PF16527 Two-component sensor protein CpxA, periplasmic domain EML4058_09220 PF01588 Putative tRNA binding domain EML4058_09225 PF14748 Pyrroline-5-carboxylate reductase dimerisation EML4058_09225 PF03807 NADP oxidoreductase coenzyme F420-dependent EML4058_09240 PF01790 Prolipoprotein diacylglyceryl transferase EML4058_09250 PF02578 Multi-copper polyphenol oxidoreductase laccase EML4058_09265 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EML4058_09265 PF14572 Phosphoribosyl synthetase-associated domain EML4058_09275 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase EML4058_09285 PF00535 Glycosyl transferase family 2 EML4058_09290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_09290 PF00672 HAMP domain EML4058_09295 PF00171 Aldehyde dehydrogenase family EML4058_09300 PF02954 Bacterial regulatory protein, Fis family EML4058_09305 PF00563 EAL domain EML4058_09305 PF13188 PAS domain EML4058_09305 PF03707 Bacterial signalling protein N terminal repeat EML4058_09305 PF00990 Diguanylate cyclase, GGDEF domain EML4058_09310 PF01386 Ribosomal L25p family EML4058_09310 PF14693 Ribosomal protein TL5, C-terminal domain EML4058_09315 PF00563 EAL domain EML4058_09315 PF00990 Diguanylate cyclase, GGDEF domain EML4058_09315 PF08447 PAS fold EML4058_09315 PF08448 PAS fold EML4058_09325 PF01195 Peptidyl-tRNA hydrolase EML4058_09335 PF02617 ATP-dependent Clp protease adaptor protein ClpS EML4058_09340 PF06071 Protein of unknown function (DUF933) EML4058_09340 PF01926 50S ribosome-binding GTPase EML4058_09355 PF00156 Phosphoribosyl transferase domain EML4058_09360 PF00032 Cytochrome b(C-terminal)/b6/petD EML4058_09360 PF02167 Cytochrome C1 family EML4058_09360 PF00033 Cytochrome b/b6/petB EML4058_09365 PF00033 Cytochrome b/b6/petB EML4058_09365 PF00032 Cytochrome b(C-terminal)/b6/petD EML4058_09370 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EML4058_09370 PF00355 Rieske [2Fe-2S] domain EML4058_09380 PF00005 ABC transporter EML4058_09380 PF00664 ABC transporter transmembrane region EML4058_09385 PF00005 ABC transporter EML4058_09385 PF00664 ABC transporter transmembrane region EML4058_09390 PF00149 Calcineurin-like phosphoesterase EML4058_09395 PF00588 SpoU rRNA Methylase family EML4058_09400 PF02690 Na+/Pi-cotransporter EML4058_09410 PF01218 Coproporphyrinogen III oxidase EML4058_09425 PF12627 Probable RNA and SrmB- binding site of polymerase A EML4058_09425 PF01743 Poly A polymerase head domain EML4058_09425 PF13735 tRNA nucleotidyltransferase domain 2 putative EML4058_09430 PF00293 NUDIX domain EML4058_09440 PF17863 AAA lid domain EML4058_09440 PF07726 ATPase family associated with various cellular activities (AAA) EML4058_09460 PF00583 Acetyltransferase (GNAT) family EML4058_09465 PF07690 Major Facilitator Superfamily EML4058_09475 PF13409 Glutathione S-transferase, N-terminal domain EML4058_09480 PF00293 NUDIX domain EML4058_09490 PF08502 LeuA allosteric (dimerisation) domain EML4058_09490 PF00682 HMGL-like EML4058_09495 PF03594 Benzoate membrane transport protein EML4058_09510 PF04542 Sigma-70 region 2 EML4058_09510 PF08281 Sigma-70, region 4 EML4058_09520 PF00574 Clp protease EML4058_09525 PF04955 HupE / UreJ protein EML4058_09535 PF14489 QueF-like protein EML4058_09540 PF01545 Cation efflux family EML4058_09540 PF16916 Dimerisation domain of Zinc Transporter EML4058_09550 PF13458 Periplasmic binding protein EML4058_09560 PF01022 Bacterial regulatory protein, arsR family EML4058_09565 PF00005 ABC transporter EML4058_09565 PF00571 CBS domain EML4058_09570 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_09575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EML4058_09580 PF00265 Thymidine kinase EML4058_09585 PF00127 Copper binding proteins, plastocyanin/azurin family EML4058_09595 PF03472 Autoinducer binding domain EML4058_09595 PF00196 Bacterial regulatory proteins, luxR family EML4058_09600 PF03350 Uncharacterized protein family, UPF0114 EML4058_09605 PF00593 TonB dependent receptor EML4058_09605 PF07715 TonB-dependent Receptor Plug Domain EML4058_09605 PF04886 PT repeat EML4058_09615 PF00117 Glutamine amidotransferase class-I EML4058_09615 PF04715 Anthranilate synthase component I, N terminal region EML4058_09615 PF00425 chorismate binding enzyme EML4058_09625 PF01966 HD domain EML4058_09625 PF11871 Domain of unknown function (DUF3391) EML4058_09630 PF13382 Adenine deaminase C-terminal domain EML4058_09630 PF01979 Amidohydrolase family EML4058_09640 PF00583 Acetyltransferase (GNAT) family EML4058_09645 PF00128 Alpha amylase, catalytic domain EML4058_09650 PF00294 pfkB family carbohydrate kinase EML4058_09670 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EML4058_09670 PF01926 50S ribosome-binding GTPase EML4058_09690 PF05992 SbmA/BacA-like family EML4058_09700 PF00557 Metallopeptidase family M24 EML4058_09715 PF01799 [2Fe-2S] binding domain EML4058_09715 PF00111 2Fe-2S iron-sulfur cluster binding domain EML4058_09720 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EML4058_09720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EML4058_09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_09730 PF03466 LysR substrate binding domain EML4058_09745 PF01979 Amidohydrolase family EML4058_09760 PF01070 FMN-dependent dehydrogenase EML4058_09765 PF00893 Small Multidrug Resistance protein EML4058_09770 PF00440 Bacterial regulatory proteins, tetR family EML4058_09770 PF17932 Tetracyclin repressor-like, C-terminal domain EML4058_09775 PF00768 D-alanyl-D-alanine carboxypeptidase EML4058_09775 PF07943 Penicillin-binding protein 5, C-terminal domain EML4058_09785 PF00576 HIUase/Transthyretin family EML4058_09790 PF04115 Ureidoglycolate lyase EML4058_09805 PF09349 OHCU decarboxylase EML4058_09805 PF01014 Uricase EML4058_09815 PF06299 Protein of unknown function (DUF1045) EML4058_09820 PF01266 FAD dependent oxidoreductase EML4058_09825 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EML4058_09825 PF01266 FAD dependent oxidoreductase EML4058_09830 PF00072 Response regulator receiver domain EML4058_09830 PF00672 HAMP domain EML4058_09830 PF00512 His Kinase A (phospho-acceptor) domain EML4058_09830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_09830 PF01627 Hpt domain EML4058_09830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EML4058_09835 PF00271 Helicase conserved C-terminal domain EML4058_09835 PF00270 DEAD/DEAH box helicase EML4058_09840 PF00892 EamA-like transporter family EML4058_09845 PF07681 DoxX EML4058_09850 PF01476 LysM domain EML4058_09850 PF03734 L,D-transpeptidase catalytic domain EML4058_09860 PF14403 Circularly permuted ATP-grasp type 2 EML4058_09870 PF08379 Bacterial transglutaminase-like N-terminal region EML4058_09870 PF01841 Transglutaminase-like superfamily EML4058_09885 PF00583 Acetyltransferase (GNAT) family EML4058_09900 PF02653 Branched-chain amino acid transport system / permease component EML4058_09905 PF00005 ABC transporter EML4058_09910 PF13407 Periplasmic binding protein domain EML4058_09915 PF03466 LysR substrate binding domain EML4058_09915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_09945 PF01757 Acyltransferase family EML4058_09955 PF00672 HAMP domain EML4058_09955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_09960 PF07690 Major Facilitator Superfamily EML4058_09965 PF02574 Homocysteine S-methyltransferase EML4058_09965 PF02310 B12 binding domain EML4058_09965 PF00809 Pterin binding enzyme EML4058_09965 PF02965 Vitamin B12 dependent methionine synthase, activation domain EML4058_09965 PF02607 B12 binding domain EML4058_09970 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_09975 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_09980 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_09985 PF00005 ABC transporter EML4058_10000 PF00331 Glycosyl hydrolase family 10 EML4058_10005 PF00535 Glycosyl transferase family 2 EML4058_10020 PF03808 Glycosyl transferase WecB/TagA/CpsF family EML4058_10035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EML4058_10035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EML4058_10035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EML4058_10035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EML4058_10040 PF01152 Bacterial-like globin EML4058_10060 PF08362 YcdC-like protein, C-terminal region EML4058_10060 PF00440 Bacterial regulatory proteins, tetR family EML4058_10065 PF01546 Peptidase family M20/M25/M40 EML4058_10065 PF07687 Peptidase dimerisation domain EML4058_10070 PF01979 Amidohydrolase family EML4058_10075 PF00293 NUDIX domain EML4058_10080 PF00005 ABC transporter EML4058_10085 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_10090 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_10105 PF00873 AcrB/AcrD/AcrF family EML4058_10115 PF12706 Beta-lactamase superfamily domain EML4058_10115 PF00753 Metallo-beta-lactamase superfamily EML4058_10120 PF02492 CobW/HypB/UreG, nucleotide-binding domain EML4058_10125 PF01730 UreF EML4058_10130 PF05194 UreE urease accessory protein, C-terminal domain EML4058_10130 PF02814 UreE urease accessory protein, N-terminal domain EML4058_10135 PF08534 Redoxin EML4058_10145 PF00449 Urease alpha-subunit, N-terminal domain EML4058_10145 PF01979 Amidohydrolase family EML4058_10155 PF07007 Lysozyme inhibitor LprI EML4058_10165 PF00699 Urease beta subunit EML4058_10170 PF06906 Protein of unknown function (DUF1272) EML4058_10175 PF00547 Urease, gamma subunit EML4058_10180 PF01774 UreD urease accessory protein EML4058_10190 PF00005 ABC transporter EML4058_10195 PF12399 Branched-chain amino acid ATP-binding cassette transporter EML4058_10195 PF00005 ABC transporter EML4058_10205 PF02653 Branched-chain amino acid transport system / permease component EML4058_10215 PF10931 Protein of unknown function (DUF2735) EML4058_10220 PF03951 Glutamine synthetase, beta-Grasp domain EML4058_10220 PF00120 Glutamine synthetase, catalytic domain EML4058_10225 PF00106 short chain dehydrogenase EML4058_10230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_10230 PF01627 Hpt domain EML4058_10230 PF00989 PAS fold EML4058_10230 PF00072 Response regulator receiver domain EML4058_10230 PF18415 Histidine kinase receptor ArcB trans-membrane domain EML4058_10230 PF00512 His Kinase A (phospho-acceptor) domain EML4058_10235 PF00072 Response regulator receiver domain EML4058_10245 PF01522 Polysaccharide deacetylase EML4058_10250 PF13458 Periplasmic binding protein EML4058_10260 PF00005 ABC transporter EML4058_10265 PF12399 Branched-chain amino acid ATP-binding cassette transporter EML4058_10265 PF00005 ABC transporter EML4058_10270 PF11862 Domain of unknown function (DUF3382) EML4058_10270 PF02653 Branched-chain amino acid transport system / permease component EML4058_10275 PF02653 Branched-chain amino acid transport system / permease component EML4058_10280 PF00459 Inositol monophosphatase family EML4058_10310 PF00072 Response regulator receiver domain EML4058_10310 PF00486 Transcriptional regulatory protein, C terminal EML4058_10330 PF10090 Histidine phosphotransferase C-terminal domain EML4058_10345 PF00588 SpoU rRNA Methylase family EML4058_10355 PF00849 RNA pseudouridylate synthase EML4058_10365 PF00140 Sigma-70 factor, region 1.2 EML4058_10365 PF04545 Sigma-70, region 4 EML4058_10365 PF04542 Sigma-70 region 2 EML4058_10375 PF00709 Adenylosuccinate synthetase EML4058_10400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EML4058_10410 PF03167 Uracil DNA glycosylase superfamily EML4058_10415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EML4058_10420 PF04304 Protein of unknown function (DUF454) EML4058_10425 PF00005 ABC transporter EML4058_10430 PF01032 FecCD transport family EML4058_10435 PF01497 Periplasmic binding protein EML4058_10445 PF06228 Haem utilisation ChuX/HutX EML4058_10455 PF00551 Formyl transferase EML4058_10460 PF00512 His Kinase A (phospho-acceptor) domain EML4058_10460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_10460 PF00672 HAMP domain EML4058_10465 PF00072 Response regulator receiver domain EML4058_10465 PF00486 Transcriptional regulatory protein, C terminal EML4058_10475 PF03401 Tripartite tricarboxylate transporter family receptor EML4058_10485 PF01970 Tripartite tricarboxylate transporter TctA family EML4058_10500 PF01032 FecCD transport family EML4058_10505 PF01032 FecCD transport family EML4058_10510 PF00005 ABC transporter EML4058_10515 PF00210 Ferritin-like domain EML4058_10530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_10530 PF03466 LysR substrate binding domain EML4058_10535 PF07859 alpha/beta hydrolase fold EML4058_10540 PF13533 Biotin-lipoyl like EML4058_10545 PF00873 AcrB/AcrD/AcrF family EML4058_10560 PF13396 Phospholipase_D-nuclease N-terminal EML4058_10560 PF13091 PLD-like domain EML4058_10565 PF08543 Phosphomethylpyrimidine kinase EML4058_10570 PF00484 Carbonic anhydrase EML4058_10580 PF01118 Semialdehyde dehydrogenase, NAD binding domain EML4058_10580 PF02774 Semialdehyde dehydrogenase, dimerisation domain EML4058_10585 PF00083 Sugar (and other) transporter EML4058_10590 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EML4058_10590 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EML4058_10590 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EML4058_10595 PF02233 NAD(P) transhydrogenase beta subunit EML4058_10600 PF01613 Flavin reductase like domain EML4058_10605 PF00881 Nitroreductase family EML4058_10610 PF00561 alpha/beta hydrolase fold EML4058_10615 PF01042 Endoribonuclease L-PSP EML4058_10620 PF00857 Isochorismatase family EML4058_10625 PF00296 Luciferase-like monooxygenase EML4058_10630 PF01126 Heme oxygenase EML4058_10635 PF00701 Dihydrodipicolinate synthetase family EML4058_10640 PF00392 Bacterial regulatory proteins, gntR family EML4058_10640 PF07729 FCD domain EML4058_10650 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_10655 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_10660 PF17912 MalK OB fold domain EML4058_10660 PF03459 TOBE domain EML4058_10660 PF00005 ABC transporter EML4058_10665 PF00294 pfkB family carbohydrate kinase EML4058_10670 PF03576 Peptidase family S58 EML4058_10675 PF01063 Amino-transferase class IV EML4058_10680 PF03466 LysR substrate binding domain EML4058_10680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_10690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_10690 PF00005 ABC transporter EML4058_10695 PF00005 ABC transporter EML4058_10695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_10700 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_10700 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_10705 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_10710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_10715 PF01244 Membrane dipeptidase (Peptidase family M19) EML4058_10725 PF03706 Lysylphosphatidylglycerol synthase TM region EML4058_10725 PF09924 Uncharacterised conserved protein (DUF2156) EML4058_10745 PF07690 Major Facilitator Superfamily EML4058_10755 PF00775 Dioxygenase EML4058_10755 PF04444 Catechol dioxygenase N terminus EML4058_10760 PF00465 Iron-containing alcohol dehydrogenase EML4058_10770 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EML4058_10770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EML4058_10775 PF01613 Flavin reductase like domain EML4058_10795 PF00512 His Kinase A (phospho-acceptor) domain EML4058_10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_10800 PF00072 Response regulator receiver domain EML4058_10800 PF00486 Transcriptional regulatory protein, C terminal EML4058_10810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EML4058_10845 PF01259 SAICAR synthetase EML4058_10855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EML4058_10855 PF00529 HlyD membrane-fusion protein of T1SS EML4058_10860 PF00873 AcrB/AcrD/AcrF family EML4058_10865 PF02321 Outer membrane efflux protein EML4058_10870 PF08207 Elongation factor P (EF-P) KOW-like domain EML4058_10870 PF09285 Elongation factor P, C-terminal EML4058_10870 PF01132 Elongation factor P (EF-P) OB domain EML4058_10875 PF00152 tRNA synthetases class II (D, K and N) EML4058_10880 PF04055 Radical SAM superfamily EML4058_10880 PF12544 Lysine-2,3-aminomutase EML4058_10895 PF03466 LysR substrate binding domain EML4058_10895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_10900 PF01266 FAD dependent oxidoreductase EML4058_10910 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_10915 PF03459 TOBE domain EML4058_10915 PF00005 ABC transporter EML4058_10925 PF03576 Peptidase family S58 EML4058_10930 PF05690 Thiazole biosynthesis protein ThiG EML4058_10940 PF01266 FAD dependent oxidoreductase EML4058_10945 PF01964 Radical SAM ThiC family EML4058_10945 PF13667 ThiC-associated domain EML4058_10950 PF00550 Phosphopantetheine attachment site EML4058_10980 PF00664 ABC transporter transmembrane region EML4058_10980 PF00005 ABC transporter EML4058_10985 PF00027 Cyclic nucleotide-binding domain EML4058_10985 PF13545 Crp-like helix-turn-helix domain EML4058_10995 PF00672 HAMP domain EML4058_10995 PF00211 Adenylate and Guanylate cyclase catalytic domain EML4058_11005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EML4058_11005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EML4058_11005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EML4058_11010 PF00534 Glycosyl transferases group 1 EML4058_11010 PF13439 Glycosyltransferase Family 4 EML4058_11025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_11025 PF00005 ABC transporter EML4058_11030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_11035 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_11040 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_11040 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_11050 PF13439 Glycosyltransferase Family 4 EML4058_11050 PF00534 Glycosyl transferases group 1 EML4058_11055 PF04101 Glycosyltransferase family 28 C-terminal domain EML4058_11055 PF03033 Glycosyltransferase family 28 N-terminal domain EML4058_11060 PF03932 CutC family EML4058_11075 PF02838 Glycosyl hydrolase family 20, domain 2 EML4058_11075 PF00728 Glycosyl hydrolase family 20, catalytic domain EML4058_11085 PF01418 Helix-turn-helix domain, rpiR family EML4058_11085 PF01380 SIS domain EML4058_11095 PF00005 ABC transporter EML4058_11095 PF17912 MalK OB fold domain EML4058_11095 PF03459 TOBE domain EML4058_11100 PF01547 Bacterial extracellular solute-binding protein EML4058_11105 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_11110 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_11120 PF00392 Bacterial regulatory proteins, gntR family EML4058_11120 PF07702 UTRA domain EML4058_11125 PF01380 SIS domain EML4058_11130 PF01979 Amidohydrolase family EML4058_11135 PF00480 ROK family EML4058_11140 PF01494 FAD binding domain EML4058_11145 PF01569 PAP2 superfamily EML4058_11150 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EML4058_11150 PF13288 DXP reductoisomerase C-terminal domain EML4058_11150 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EML4058_11155 PF00155 Aminotransferase class I and II EML4058_11165 PF01103 Surface antigen EML4058_11165 PF07244 Surface antigen variable number repeat EML4058_11165 PF17243 POTRA domain TamA domain 1 EML4058_11175 PF01584 CheW-like domain EML4058_11180 PF08447 PAS fold EML4058_11180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_11180 PF13426 PAS domain EML4058_11185 PF02634 FdhD/NarQ family EML4058_11190 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EML4058_11195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EML4058_11195 PF02874 ATP synthase alpha/beta family, beta-barrel domain EML4058_11200 PF00231 ATP synthase EML4058_11205 PF00306 ATP synthase alpha/beta chain, C terminal domain EML4058_11205 PF02874 ATP synthase alpha/beta family, beta-barrel domain EML4058_11205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EML4058_11210 PF00213 ATP synthase delta (OSCP) subunit EML4058_11220 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EML4058_11220 PF18074 Primosomal protein N C-terminal domain EML4058_11220 PF17764 3′ DNA-binding domain (3′BD) EML4058_11220 PF00270 DEAD/DEAH box helicase EML4058_11225 PF02899 Phage integrase, N-terminal SAM-like domain EML4058_11225 PF00589 Phage integrase family EML4058_11245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EML4058_11245 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_11250 PF01810 LysE type translocator EML4058_11260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EML4058_11260 PF00364 Biotin-requiring enzyme EML4058_11260 PF02817 e3 binding domain EML4058_11265 PF02779 Transketolase, pyrimidine binding domain EML4058_11265 PF16870 2-oxoglutarate dehydrogenase C-terminal EML4058_11265 PF00676 Dehydrogenase E1 component EML4058_11265 PF16078 2-oxoglutarate dehydrogenase N-terminus EML4058_11270 PF02629 CoA binding domain EML4058_11270 PF00549 CoA-ligase EML4058_11275 PF00549 CoA-ligase EML4058_11275 PF08442 ATP-grasp domain EML4058_11280 PF00056 lactate/malate dehydrogenase, NAD binding domain EML4058_11280 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EML4058_11285 PF03969 AFG1-like ATPase EML4058_11290 PF02974 Protease inhibitor Inh EML4058_11295 PF13085 2Fe-2S iron-sulfur cluster binding domain EML4058_11295 PF13237 4Fe-4S dicluster domain EML4058_11300 PF02910 Fumarate reductase flavoprotein C-term EML4058_11300 PF00890 FAD binding domain EML4058_11310 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EML4058_11335 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EML4058_11335 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EML4058_11340 PF00814 Glycoprotease family EML4058_11345 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EML4058_11345 PF03900 Porphobilinogen deaminase, C-terminal domain EML4058_11370 PF00117 Glutamine amidotransferase class-I EML4058_11380 PF02325 YGGT family EML4058_11385 PF02594 Uncharacterised ACR, YggU family COG1872 EML4058_11390 PF00719 Inorganic pyrophosphatase EML4058_11400 PF00679 Elongation factor G C-terminus EML4058_11400 PF03144 Elongation factor Tu domain 2 EML4058_11400 PF00009 Elongation factor Tu GTP binding domain EML4058_11405 PF01432 Peptidase family M3 EML4058_11410 PF01047 MarR family EML4058_11415 PF07690 Major Facilitator Superfamily EML4058_11420 PF00764 Arginosuccinate synthase EML4058_11425 PF00106 short chain dehydrogenase EML4058_11430 PF01810 LysE type translocator EML4058_11435 PF00005 ABC transporter EML4058_11440 PF02653 Branched-chain amino acid transport system / permease component EML4058_11450 PF04055 Radical SAM superfamily EML4058_11465 PF01329 Pterin 4 alpha carbinolamine dehydratase EML4058_11470 PF01451 Low molecular weight phosphotyrosine protein phosphatase EML4058_11475 PF02834 LigT like Phosphoesterase EML4058_11480 PF13472 GDSL-like Lipase/Acylhydrolase family EML4058_11485 PF00005 ABC transporter EML4058_11495 PF01027 Inhibitor of apoptosis-promoting Bax1 EML4058_11510 PF00330 Aconitase family (aconitate hydratase) EML4058_11510 PF00694 Aconitase C-terminal domain EML4058_11515 PF00005 ABC transporter EML4058_11520 PF03379 CcmB protein EML4058_11525 PF01578 Cytochrome C assembly protein EML4058_11535 PF08534 Redoxin EML4058_11540 PF00990 Diguanylate cyclase, GGDEF domain EML4058_11545 PF10755 Protein of unknown function (DUF2585) EML4058_11550 PF04279 Intracellular septation protein A EML4058_11555 PF02881 SRP54-type protein, helical bundle domain EML4058_11555 PF00448 SRP54-type protein, GTPase domain EML4058_11560 PF00919 Uncharacterized protein family UPF0004 EML4058_11560 PF04055 Radical SAM superfamily EML4058_11565 PF01678 Diaminopimelate epimerase EML4058_11570 PF12706 Beta-lactamase superfamily domain EML4058_11575 PF00448 SRP54-type protein, GTPase domain EML4058_11575 PF02881 SRP54-type protein, helical bundle domain EML4058_11575 PF02978 Signal peptide binding domain EML4058_11580 PF01817 Chorismate mutase type II EML4058_11580 PF02153 Prephenate dehydrogenase EML4058_11585 PF00886 Ribosomal protein S16 EML4058_11590 PF05239 PRC-barrel domain EML4058_11590 PF01782 RimM N-terminal domain EML4058_11595 PF01746 tRNA (Guanine-1)-methyltransferase EML4058_11605 PF01245 Ribosomal protein L19 EML4058_11610 PF00664 ABC transporter transmembrane region EML4058_11610 PF00005 ABC transporter EML4058_11615 PF00529 HlyD membrane-fusion protein of T1SS EML4058_11615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EML4058_11625 PF07690 Major Facilitator Superfamily EML4058_11630 PF00330 Aconitase family (aconitate hydratase) EML4058_11635 PF01435 Peptidase family M48 EML4058_11640 PF00005 ABC transporter EML4058_11645 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_11650 PF01547 Bacterial extracellular solute-binding protein EML4058_11660 PF16326 ABC transporter C-terminal domain EML4058_11660 PF00005 ABC transporter EML4058_11670 PF04204 Homoserine O-succinyltransferase EML4058_11675 PF01263 Aldose 1-epimerase EML4058_11680 PF00912 Transglycosylase EML4058_11685 PF00348 Polyprenyl synthetase EML4058_11690 PF00691 OmpA family EML4058_11690 PF13488 Glycine zipper EML4058_11695 PF04551 GcpE protein EML4058_11700 PF07690 Major Facilitator Superfamily EML4058_11705 PF00455 DeoR C terminal sensor domain EML4058_11705 PF08220 DeoR-like helix-turn-helix domain EML4058_11710 PF02436 Conserved carboxylase domain EML4058_11710 PF00682 HMGL-like EML4058_11710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EML4058_11710 PF00364 Biotin-requiring enzyme EML4058_11710 PF00289 Biotin carboxylase, N-terminal domain EML4058_11710 PF02785 Biotin carboxylase C-terminal domain EML4058_11715 PF00196 Bacterial regulatory proteins, luxR family EML4058_11715 PF00072 Response regulator receiver domain EML4058_11720 PF00664 ABC transporter transmembrane region EML4058_11720 PF00005 ABC transporter EML4058_11730 PF06165 Glycosyltransferase family 36 EML4058_11730 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EML4058_11730 PF10091 Putative glucoamylase EML4058_11735 PF01546 Peptidase family M20/M25/M40 EML4058_11735 PF07687 Peptidase dimerisation domain EML4058_11740 PF01266 FAD dependent oxidoreductase EML4058_11745 PF00291 Pyridoxal-phosphate dependent enzyme EML4058_11750 PF00920 Dehydratase family EML4058_11755 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EML4058_11755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EML4058_11760 PF01370 NAD dependent epimerase/dehydratase family EML4058_11765 PF01565 FAD binding domain EML4058_11765 PF02913 FAD linked oxidases, C-terminal domain EML4058_11770 PF00392 Bacterial regulatory proteins, gntR family EML4058_11770 PF07729 FCD domain EML4058_11780 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EML4058_11785 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EML4058_11790 PF03480 Bacterial extracellular solute-binding protein, family 7 EML4058_11795 PF00501 AMP-binding enzyme EML4058_11795 PF16177 Acetyl-coenzyme A synthetase N-terminus EML4058_11795 PF13193 AMP-binding enzyme C-terminal domain EML4058_11805 PF01168 Alanine racemase, N-terminal domain EML4058_11810 PF13603 Leucyl-tRNA synthetase, Domain 2 EML4058_11810 PF08264 Anticodon-binding domain of tRNA EML4058_11810 PF00133 tRNA synthetases class I (I, L, M and V) EML4058_11825 PF00037 4Fe-4S binding domain EML4058_11825 PF11953 Domain of unknown function (DUF3470) EML4058_11840 PF01494 FAD binding domain EML4058_11850 PF00543 Nitrogen regulatory protein P-II EML4058_11855 PF00909 Ammonium Transporter Family EML4058_11860 PF09397 Ftsk gamma domain EML4058_11860 PF01580 FtsK/SpoIIIE family EML4058_11860 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EML4058_11860 PF17854 FtsK alpha domain EML4058_11865 PF03548 Outer membrane lipoprotein carrier protein LolA EML4058_11880 PF00072 Response regulator receiver domain EML4058_11880 PF00486 Transcriptional regulatory protein, C terminal EML4058_11890 PF02559 CarD-like/TRCF domain EML4058_11895 PF05088 Bacterial NAD-glutamate dehydrogenase EML4058_11900 PF11700 Vacuole effluxer Atg22 like EML4058_11905 PF05233 PHB accumulation regulatory domain EML4058_11905 PF07879 PHB/PHA accumulation regulator DNA-binding domain EML4058_11910 PF02803 Thiolase, C-terminal domain EML4058_11910 PF00108 Thiolase, N-terminal domain EML4058_11925 PF00210 Ferritin-like domain EML4058_11930 PF00293 NUDIX domain EML4058_11940 PF13180 PDZ domain EML4058_11940 PF03572 Peptidase family S41 EML4058_11950 PF02590 Predicted SPOUT methyltransferase EML4058_11960 PF01467 Cytidylyltransferase-like EML4058_11965 PF00171 Aldehyde dehydrogenase family EML4058_11970 PF01472 PUA domain EML4058_11970 PF00696 Amino acid kinase family EML4058_11975 PF01926 50S ribosome-binding GTPase EML4058_11975 PF01018 GTP1/OBG EML4058_11980 PF13302 Acetyltransferase (GNAT) domain EML4058_11990 PF01016 Ribosomal L27 protein EML4058_11995 PF00829 Ribosomal prokaryotic L21 protein EML4058_12010 PF03328 HpcH/HpaI aldolase/citrate lyase family EML4058_12020 PF00694 Aconitase C-terminal domain EML4058_12025 PF00180 Isocitrate/isopropylmalate dehydrogenase EML4058_12030 PF03150 Di-haem cytochrome c peroxidase EML4058_12035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EML4058_12035 PF07685 CobB/CobQ-like glutamine amidotransferase domain EML4058_12040 PF10414 Sirohaem synthase dimerisation region EML4058_12040 PF14824 Sirohaem biosynthesis protein central EML4058_12040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EML4058_12045 PF01888 CbiD EML4058_12050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EML4058_12060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EML4058_12065 PF02571 Precorrin-6x reductase CbiJ/CobK EML4058_12070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EML4058_12075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EML4058_12080 PF02570 Precorrin-8X methylmutase EML4058_12085 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EML4058_12090 PF02514 CobN/Magnesium Chelatase EML4058_12095 PF02492 CobW/HypB/UreG, nucleotide-binding domain EML4058_12095 PF07683 Cobalamin synthesis protein cobW C-terminal domain EML4058_12105 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EML4058_12110 PF07685 CobB/CobQ-like glutamine amidotransferase domain EML4058_12110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EML4058_12115 PF03186 CobD/Cbib protein EML4058_12120 PF00155 Aminotransferase class I and II EML4058_12125 PF13378 Enolase C-terminal domain-like EML4058_12125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EML4058_12130 PF05336 L-rhamnose mutarotase EML4058_12135 PF08125 Mannitol dehydrogenase C-terminal domain EML4058_12135 PF01232 Mannitol dehydrogenase Rossmann domain EML4058_12140 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_12140 PF00107 Zinc-binding dehydrogenase EML4058_12150 PF00248 Aldo/keto reductase family EML4058_12160 PF02653 Branched-chain amino acid transport system / permease component EML4058_12165 PF00005 ABC transporter EML4058_12170 PF07729 FCD domain EML4058_12170 PF00392 Bacterial regulatory proteins, gntR family EML4058_12175 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EML4058_12175 PF08666 SAF domain EML4058_12180 PF01808 AICARFT/IMPCHase bienzyme EML4058_12180 PF02142 MGS-like domain EML4058_12190 PF01189 16S rRNA methyltransferase RsmB/F EML4058_12190 PF01029 NusB family EML4058_12195 PF01435 Peptidase family M48 EML4058_12205 PF17762 HTH domain found in ParB protein EML4058_12205 PF02195 ParB-like nuclease domain EML4058_12210 PF13614 AAA domain EML4058_12215 PF02527 rRNA small subunit methyltransferase G EML4058_12220 PF13932 GidA associated domain EML4058_12220 PF01134 Glucose inhibited division protein A EML4058_12225 PF12631 MnmE helical domain EML4058_12225 PF10396 GTP-binding protein TrmE N-terminus EML4058_12225 PF01926 50S ribosome-binding GTPase EML4058_12230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EML4058_12230 PF07497 Rho termination factor, RNA-binding domain EML4058_12230 PF07498 Rho termination factor, N-terminal domain EML4058_12235 PF03653 Uncharacterised protein family (UPF0093) EML4058_12240 PF01208 Uroporphyrinogen decarboxylase (URO-D) EML4058_12245 PF03618 Kinase/pyrophosphorylase EML4058_12250 PF02545 Maf-like protein EML4058_12255 PF08501 Shikimate dehydrogenase substrate binding domain EML4058_12255 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EML4058_12255 PF01488 Shikimate / quinate 5-dehydrogenase EML4058_12260 PF01121 Dephospho-CoA kinase EML4058_12265 PF00929 Exonuclease EML4058_12270 PF02556 Preprotein translocase subunit SecB EML4058_12275 PF04186 FxsA cytoplasmic membrane protein EML4058_12285 PF06725 3D domain EML4058_12285 PF03562 MltA specific insert domain EML4058_12300 PF01751 Toprim domain EML4058_12300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_12300 PF00986 DNA gyrase B subunit, carboxyl terminus EML4058_12300 PF00204 DNA gyrase B EML4058_12310 PF01557 Fumarylacetoacetate (FAA) hydrolase family EML4058_12325 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EML4058_12330 PF00291 Pyridoxal-phosphate dependent enzyme EML4058_12335 PF00290 Tryptophan synthase alpha chain EML4058_12340 PF01039 Carboxyl transferase domain EML4058_12345 PF02875 Mur ligase family, glutamate ligase domain EML4058_12345 PF08245 Mur ligase middle domain EML4058_12350 PF00085 Thioredoxin EML4058_12355 PF12705 PD-(D/E)XK nuclease superfamily EML4058_12355 PF00580 UvrD/REP helicase N-terminal domain EML4058_12355 PF13361 UvrD-like helicase C-terminal domain EML4058_12365 PF12804 MobA-like NTP transferase domain EML4058_12370 PF01636 Phosphotransferase enzyme family EML4058_12375 PF00512 His Kinase A (phospho-acceptor) domain EML4058_12375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_12380 PF05221 S-adenosyl-L-homocysteine hydrolase EML4058_12380 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EML4058_12385 PF00381 PTS HPr component phosphorylation site EML4058_12390 PF03610 PTS system fructose IIA component EML4058_12390 PF03830 PTS system sorbose subfamily IIB component EML4058_12395 PF07475 HPr Serine kinase C-terminal domain EML4058_12395 PF02603 HPr Serine kinase N terminus EML4058_12400 PF13755 Sensor N-terminal transmembrane domain EML4058_12400 PF00512 His Kinase A (phospho-acceptor) domain EML4058_12400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_12400 PF13756 Stimulus-sensing domain EML4058_12400 PF00672 HAMP domain EML4058_12405 PF00072 Response regulator receiver domain EML4058_12405 PF00486 Transcriptional regulatory protein, C terminal EML4058_12410 PF01293 Phosphoenolpyruvate carboxykinase EML4058_12415 PF00472 RF-1 domain EML4058_12420 PF00485 Phosphoribulokinase / Uridine kinase family EML4058_12425 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EML4058_12430 PF00977 Histidine biosynthesis protein EML4058_12435 PF00977 Histidine biosynthesis protein EML4058_12440 PF00117 Glutamine amidotransferase class-I EML4058_12450 PF00475 Imidazoleglycerol-phosphate dehydratase EML4058_12455 PF00227 Proteasome subunit EML4058_12460 PF07724 AAA domain (Cdc48 subfamily) EML4058_12460 PF10431 C-terminal, D2-small domain, of ClpB protein EML4058_12460 PF00004 ATPase family associated with various cellular activities (AAA) EML4058_12470 PF01274 Malate synthase EML4058_12485 PF00072 Response regulator receiver domain EML4058_12490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_12490 PF00512 His Kinase A (phospho-acceptor) domain EML4058_12495 PF00271 Helicase conserved C-terminal domain EML4058_12495 PF04408 Helicase associated domain (HA2) EML4058_12495 PF00270 DEAD/DEAH box helicase EML4058_12495 PF08482 ATP-dependent helicase C-terminal EML4058_12530 PF00270 DEAD/DEAH box helicase EML4058_12530 PF00271 Helicase conserved C-terminal domain EML4058_12530 PF16124 RecQ zinc-binding EML4058_12530 PF00570 HRDC domain EML4058_12530 PF09382 RQC domain EML4058_12540 PF13407 Periplasmic binding protein domain EML4058_12545 PF02653 Branched-chain amino acid transport system / permease component EML4058_12550 PF00005 ABC transporter EML4058_12555 PF00485 Phosphoribulokinase / Uridine kinase family EML4058_12560 PF00462 Glutaredoxin EML4058_12565 PF07972 NrdI Flavodoxin like EML4058_12570 PF02867 Ribonucleotide reductase, barrel domain EML4058_12570 PF08343 Ribonucleotide reductase N-terminal EML4058_12570 PF00317 Ribonucleotide reductase, all-alpha domain EML4058_12575 PF00268 Ribonucleotide reductase, small chain EML4058_12585 PF02463 RecF/RecN/SMC N terminal domain EML4058_12590 PF00899 ThiF family EML4058_12590 PF00581 Rhodanese-like domain EML4058_12605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_12605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EML4058_12615 PF00294 pfkB family carbohydrate kinase EML4058_12625 PF08468 Methyltransferase small domain N-terminal EML4058_12625 PF05175 Methyltransferase small domain EML4058_12630 PF03725 3' exoribonuclease family, domain 2 EML4058_12630 PF01138 3' exoribonuclease family, domain 1 EML4058_12630 PF00013 KH domain EML4058_12630 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EML4058_12630 PF00575 S1 RNA binding domain EML4058_12635 PF00312 Ribosomal protein S15 EML4058_12640 PF09157 Pseudouridine synthase II TruB, C-terminal EML4058_12640 PF16198 tRNA pseudouridylate synthase B C-terminal domain EML4058_12640 PF01509 TruB family pseudouridylate synthase (N terminal domain) EML4058_12645 PF02033 Ribosome-binding factor A EML4058_12650 PF04760 Translation initiation factor IF-2, N-terminal region EML4058_12650 PF00009 Elongation factor Tu GTP binding domain EML4058_12650 PF08364 Bacterial translation initiation factor IF-2 associated region EML4058_12650 PF03144 Elongation factor Tu domain 2 EML4058_12650 PF11987 Translation-initiation factor 2 EML4058_12660 PF00575 S1 RNA binding domain EML4058_12660 PF13184 NusA-like KH domain EML4058_12660 PF08529 NusA N-terminal domain EML4058_12665 PF02576 RimP N-terminal domain EML4058_12665 PF17384 RimP C-terminal SH3 domain EML4058_12670 PF05977 Transmembrane secretion effector EML4058_12675 PF13406 Transglycosylase SLT domain EML4058_12680 PF13662 Toprim domain EML4058_12680 PF02132 RecR protein EML4058_12690 PF02575 YbaB/EbfC DNA-binding family EML4058_12695 PF12169 DNA polymerase III subunits gamma and tau domain III EML4058_12695 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EML4058_12695 PF12170 DNA polymerase III tau subunit V interacting with alpha EML4058_12710 PF09297 NADH pyrophosphatase zinc ribbon domain EML4058_12710 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EML4058_12710 PF00293 NUDIX domain EML4058_12715 PF00800 Prephenate dehydratase EML4058_12715 PF01817 Chorismate mutase type II EML4058_12720 PF02348 Cytidylyltransferase EML4058_12725 PF00034 Cytochrome c EML4058_12730 PF02397 Bacterial sugar transferase EML4058_12735 PF00905 Penicillin binding protein transpeptidase domain EML4058_12735 PF00912 Transglycosylase EML4058_12740 PF04073 Aminoacyl-tRNA editing domain EML4058_12745 PF00313 'Cold-shock' DNA-binding domain EML4058_12750 PF01546 Peptidase family M20/M25/M40 EML4058_12750 PF07687 Peptidase dimerisation domain EML4058_12755 PF01047 MarR family EML4058_12765 PF01612 3'-5' exonuclease EML4058_12765 PF01367 5'-3' exonuclease, C-terminal SAM fold EML4058_12765 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EML4058_12765 PF00476 DNA polymerase family A EML4058_12775 PF01783 Ribosomal L32p protein family EML4058_12780 PF02743 Cache domain EML4058_12780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_12780 PF00512 His Kinase A (phospho-acceptor) domain EML4058_12785 PF00072 Response regulator receiver domain EML4058_12785 PF02954 Bacterial regulatory protein, Fis family EML4058_12785 PF00158 Sigma-54 interaction domain EML4058_12790 PF03401 Tripartite tricarboxylate transporter family receptor EML4058_12795 PF07331 Tripartite tricarboxylate transporter TctB family EML4058_12800 PF01970 Tripartite tricarboxylate transporter TctA family EML4058_12805 PF04102 SlyX EML4058_12815 PF00226 DnaJ domain EML4058_12815 PF01556 DnaJ C terminal domain EML4058_12815 PF00684 DnaJ central domain EML4058_12820 PF00012 Hsp70 protein EML4058_12835 PF01625 Peptide methionine sulfoxide reductase EML4058_12840 PF02608 ABC transporter substrate-binding protein PnrA-like EML4058_12845 PF00005 ABC transporter EML4058_12850 PF02653 Branched-chain amino acid transport system / permease component EML4058_12855 PF02653 Branched-chain amino acid transport system / permease component EML4058_12860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EML4058_12865 PF01048 Phosphorylase superfamily EML4058_12870 PF01791 DeoC/LacD family aldolase EML4058_12875 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EML4058_12875 PF02885 Glycosyl transferase family, helical bundle domain EML4058_12875 PF00591 Glycosyl transferase family, a/b domain EML4058_12890 PF00962 Adenosine/AMP deaminase EML4058_12895 PF01676 Metalloenzyme superfamily EML4058_12905 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EML4058_12910 PF00510 Cytochrome c oxidase subunit III EML4058_12915 PF00115 Cytochrome C and Quinol oxidase polypeptide I EML4058_12920 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EML4058_12920 PF06481 COX Aromatic Rich Motif EML4058_12925 PF07690 Major Facilitator Superfamily EML4058_12925 PF00083 Sugar (and other) transporter EML4058_12930 PF01493 GXGXG motif EML4058_12930 PF00310 Glutamine amidotransferases class-II EML4058_12930 PF01645 Conserved region in glutamate synthase EML4058_12930 PF04898 Glutamate synthase central domain EML4058_12935 PF00175 Oxidoreductase NAD-binding domain EML4058_12935 PF00258 Flavodoxin EML4058_12935 PF00667 FAD binding domain EML4058_12955 PF02801 Beta-ketoacyl synthase, C-terminal domain EML4058_12955 PF00109 Beta-ketoacyl synthase, N-terminal domain EML4058_12960 PF07977 FabA-like domain EML4058_12970 PF03458 UPF0126 domain EML4058_12980 PF06912 Protein of unknown function (DUF1275) EML4058_12990 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_12995 PF00005 ABC transporter EML4058_13000 PF00392 Bacterial regulatory proteins, gntR family EML4058_13000 PF07702 UTRA domain EML4058_13005 PF01618 MotA/TolQ/ExbB proton channel family EML4058_13010 PF02472 Biopolymer transport protein ExbD/TolR EML4058_13020 PF02615 Malate/L-lactate dehydrogenase EML4058_13035 PF00625 Guanylate kinase EML4058_13040 PF07969 Amidohydrolase family EML4058_13045 PF06299 Protein of unknown function (DUF1045) EML4058_13050 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_13055 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_13065 PF00005 ABC transporter EML4058_13075 PF00005 ABC transporter EML4058_13080 PF00005 ABC transporter EML4058_13085 PF06007 Phosphonate metabolism protein PhnJ EML4058_13090 PF05861 Bacterial phosphonate metabolism protein (PhnI) EML4058_13095 PF05845 Bacterial phosphonate metabolism protein (PhnH) EML4058_13100 PF06754 Phosphonate metabolism protein PhnG EML4058_13105 PF00392 Bacterial regulatory proteins, gntR family EML4058_13105 PF07702 UTRA domain EML4058_13110 PF01113 Dihydrodipicolinate reductase, N-terminus EML4058_13110 PF05173 Dihydrodipicolinate reductase, C-terminus EML4058_13115 PF02685 Glucokinase EML4058_13120 PF02142 MGS-like domain EML4058_13125 PF03411 Penicillin-insensitive murein endopeptidase EML4058_13130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_13135 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_13140 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_13140 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_13145 PF00005 ABC transporter EML4058_13145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_13155 PF00120 Glutamine synthetase, catalytic domain EML4058_13160 PF01266 FAD dependent oxidoreductase EML4058_13170 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_13175 PF00005 ABC transporter EML4058_13180 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_13185 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EML4058_13195 PF02082 Transcriptional regulator EML4058_13200 PF13416 Bacterial extracellular solute-binding protein EML4058_13210 PF05987 Bacterial protein of unknown function (DUF898) EML4058_13215 PF00171 Aldehyde dehydrogenase family EML4058_13225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_13225 PF03466 LysR substrate binding domain EML4058_13230 PF00892 EamA-like transporter family EML4058_13245 PF00877 NlpC/P60 family EML4058_13255 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EML4058_13255 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EML4058_13260 PF02789 Cytosol aminopeptidase family, N-terminal domain EML4058_13260 PF00883 Cytosol aminopeptidase family, catalytic domain EML4058_13280 PF00437 Type II/IV secretion system protein EML4058_13295 PF04972 BON domain EML4058_13295 PF00263 Bacterial type II and III secretion system protein EML4058_13295 PF13629 Pilus formation protein N terminal region EML4058_13340 PF07411 Domain of unknown function (DUF1508) EML4058_13345 PF01183 Glycosyl hydrolases family 25 EML4058_13350 PF00892 EamA-like transporter family EML4058_13355 PF00392 Bacterial regulatory proteins, gntR family EML4058_13355 PF00155 Aminotransferase class I and II EML4058_13385 PF06421 GTP-binding protein LepA C-terminus EML4058_13385 PF03144 Elongation factor Tu domain 2 EML4058_13385 PF00679 Elongation factor G C-terminus EML4058_13385 PF00009 Elongation factor Tu GTP binding domain EML4058_13390 PF00795 Carbon-nitrogen hydrolase EML4058_13420 PF02311 AraC-like ligand binding domain EML4058_13420 PF12833 Helix-turn-helix domain EML4058_13425 PF03480 Bacterial extracellular solute-binding protein, family 7 EML4058_13450 PF05198 Translation initiation factor IF-3, N-terminal domain EML4058_13450 PF00707 Translation initiation factor IF-3, C-terminal domain EML4058_13455 PF01632 Ribosomal protein L35 EML4058_13460 PF00453 Ribosomal protein L20 EML4058_13470 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EML4058_13470 PF01409 tRNA synthetases class II core domain (F) EML4058_13475 PF03147 Ferredoxin-fold anticodon binding domain EML4058_13475 PF03484 tRNA synthetase B5 domain EML4058_13475 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EML4058_13475 PF03483 B3/4 domain EML4058_13475 PF01588 Putative tRNA binding domain EML4058_13480 PF00248 Aldo/keto reductase family EML4058_13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_13485 PF03466 LysR substrate binding domain EML4058_13495 PF00248 Aldo/keto reductase family EML4058_13500 PF01965 DJ-1/PfpI family EML4058_13500 PF12833 Helix-turn-helix domain EML4058_13510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_13510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_13525 PF02601 Exonuclease VII, large subunit EML4058_13525 PF13742 OB-fold nucleic acid binding domain EML4058_13530 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EML4058_13530 PF13378 Enolase C-terminal domain-like EML4058_13535 PF07729 FCD domain EML4058_13535 PF00392 Bacterial regulatory proteins, gntR family EML4058_13540 PF01047 MarR family EML4058_13545 PF00892 EamA-like transporter family EML4058_13550 PF02073 Thermophilic metalloprotease (M29) EML4058_13555 PF04073 Aminoacyl-tRNA editing domain EML4058_13560 PF03960 ArsC family EML4058_13575 PF00440 Bacterial regulatory proteins, tetR family EML4058_13585 PF00958 GMP synthase C terminal domain EML4058_13585 PF00117 Glutamine amidotransferase class-I EML4058_13600 PF03073 TspO/MBR family EML4058_13625 PF01189 16S rRNA methyltransferase RsmB/F EML4058_13625 PF01029 NusB family EML4058_13630 PF03330 Lytic transglycolase EML4058_13640 PF08331 Domain of unknown function (DUF1730) EML4058_13645 PF00043 Glutathione S-transferase, C-terminal domain EML4058_13645 PF13417 Glutathione S-transferase, N-terminal domain EML4058_13650 PF02673 Bacitracin resistance protein BacA EML4058_13670 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EML4058_13680 PF00398 Ribosomal RNA adenine dimethylase EML4058_13685 PF02767 DNA polymerase III beta subunit, central domain EML4058_13685 PF02768 DNA polymerase III beta subunit, C-terminal domain EML4058_13685 PF00712 DNA polymerase III beta subunit, N-terminal domain EML4058_13690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EML4058_13695 PF02021 Uncharacterised protein family UPF0102 EML4058_13700 PF12464 Maltose acetyltransferase EML4058_13700 PF14602 Hexapeptide repeat of succinyl-transferase EML4058_13705 PF13416 Bacterial extracellular solute-binding protein EML4058_13710 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_13715 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_13720 PF00005 ABC transporter EML4058_13730 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EML4058_13730 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EML4058_13735 PF13335 Magnesium chelatase, subunit ChlI C-terminal EML4058_13735 PF01078 Magnesium chelatase, subunit ChlI EML4058_13740 PF00291 Pyridoxal-phosphate dependent enzyme EML4058_13745 PF01810 LysE type translocator EML4058_13750 PF00692 dUTPase EML4058_13755 PF03144 Elongation factor Tu domain 2 EML4058_13755 PF16658 Class II release factor RF3, C-terminal domain EML4058_13755 PF00009 Elongation factor Tu GTP binding domain EML4058_13760 PF04127 DNA / pantothenate metabolism flavoprotein EML4058_13760 PF02441 Flavoprotein EML4058_13775 PF03109 ABC1 family EML4058_13780 PF01209 ubiE/COQ5 methyltransferase family EML4058_13785 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EML4058_13785 PF06827 Zinc finger found in FPG and IleRS EML4058_13785 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EML4058_13790 PF00378 Enoyl-CoA hydratase/isomerase EML4058_13795 PF01649 Ribosomal protein S20 EML4058_13825 PF01757 Acyltransferase family EML4058_13875 PF00392 Bacterial regulatory proteins, gntR family EML4058_13875 PF07729 FCD domain EML4058_13880 PF17912 MalK OB fold domain EML4058_13880 PF00005 ABC transporter EML4058_13885 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_13890 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_13895 PF01547 Bacterial extracellular solute-binding protein EML4058_13915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_13915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EML4058_13925 PF13378 Enolase C-terminal domain-like EML4058_13925 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EML4058_13955 PF00072 Response regulator receiver domain EML4058_13955 PF00196 Bacterial regulatory proteins, luxR family EML4058_13960 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_13965 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_13965 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_13970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_13970 PF00005 ABC transporter EML4058_13985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_14000 PF01112 Asparaginase EML4058_14010 PF01266 FAD dependent oxidoreductase EML4058_14015 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_14015 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14020 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_14030 PF01266 FAD dependent oxidoreductase EML4058_14035 PF00300 Histidine phosphatase superfamily (branch 1) EML4058_14035 PF00106 short chain dehydrogenase EML4058_14045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_14045 PF00005 ABC transporter EML4058_14060 PF00535 Glycosyl transferase family 2 EML4058_14060 PF03552 Cellulose synthase EML4058_14060 PF07238 PilZ domain EML4058_14070 PF00999 Sodium/hydrogen exchanger family EML4058_14075 PF06472 ABC transporter transmembrane region 2 EML4058_14075 PF00005 ABC transporter EML4058_14080 PF00990 Diguanylate cyclase, GGDEF domain EML4058_14085 PF00356 Bacterial regulatory proteins, lacI family EML4058_14095 PF00005 ABC transporter EML4058_14100 PF02653 Branched-chain amino acid transport system / permease component EML4058_14105 PF02126 Phosphotriesterase family EML4058_14115 PF00294 pfkB family carbohydrate kinase EML4058_14125 PF01546 Peptidase family M20/M25/M40 EML4058_14125 PF07687 Peptidase dimerisation domain EML4058_14135 PF13193 AMP-binding enzyme C-terminal domain EML4058_14135 PF00501 AMP-binding enzyme EML4058_14135 PF00668 Condensation domain EML4058_14135 PF00550 Phosphopantetheine attachment site EML4058_14135 PF00975 Thioesterase domain EML4058_14140 PF01177 Asp/Glu/Hydantoin racemase EML4058_14150 PF00440 Bacterial regulatory proteins, tetR family EML4058_14155 PF00860 Permease family EML4058_14160 PF00144 Beta-lactamase EML4058_14165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_14165 PF03466 LysR substrate binding domain EML4058_14195 PF08281 Sigma-70, region 4 EML4058_14195 PF04542 Sigma-70 region 2 EML4058_14200 PF01177 Asp/Glu/Hydantoin racemase EML4058_14205 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14210 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14220 PF08402 TOBE domain EML4058_14220 PF00005 ABC transporter EML4058_14245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_14245 PF08447 PAS fold EML4058_14245 PF13426 PAS domain EML4058_14255 PF13416 Bacterial extracellular solute-binding protein EML4058_14260 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14265 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14270 PF17912 MalK OB fold domain EML4058_14270 PF00005 ABC transporter EML4058_14275 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14280 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14290 PF17912 MalK OB fold domain EML4058_14290 PF00005 ABC transporter EML4058_14295 PF06964 Alpha-L-arabinofuranosidase C-terminal domain EML4058_14310 PF00356 Bacterial regulatory proteins, lacI family EML4058_14320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_14320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EML4058_14325 PF01261 Xylose isomerase-like TIM barrel EML4058_14330 PF00005 ABC transporter EML4058_14330 PF17912 MalK OB fold domain EML4058_14330 PF03459 TOBE domain EML4058_14335 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14340 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14345 PF13416 Bacterial extracellular solute-binding protein EML4058_14350 PF17938 Tetracyclin repressor-like, C-terminal domain EML4058_14350 PF00440 Bacterial regulatory proteins, tetR family EML4058_14355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_14355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_14370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_14370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_14380 PF00313 'Cold-shock' DNA-binding domain EML4058_14390 PF01165 Ribosomal protein S21 EML4058_14415 PF07470 Glycosyl Hydrolase Family 88 EML4058_14420 PF00295 Glycosyl hydrolases family 28 EML4058_14430 PF00005 ABC transporter EML4058_14430 PF08402 TOBE domain EML4058_14435 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14440 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14445 PF12833 Helix-turn-helix domain EML4058_14445 PF02311 AraC-like ligand binding domain EML4058_14450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EML4058_14460 PF03480 Bacterial extracellular solute-binding protein, family 7 EML4058_14465 PF04909 Amidohydrolase EML4058_14470 PF13378 Enolase C-terminal domain-like EML4058_14470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EML4058_14475 PF00701 Dihydrodipicolinate synthetase family EML4058_14485 PF04962 KduI/IolB family EML4058_14490 PF01370 NAD dependent epimerase/dehydratase family EML4058_14495 PF00392 Bacterial regulatory proteins, gntR family EML4058_14495 PF07729 FCD domain EML4058_14505 PF01321 Creatinase/Prolidase N-terminal domain EML4058_14505 PF00557 Metallopeptidase family M24 EML4058_14510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_14510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_14515 PF00005 ABC transporter EML4058_14515 PF17912 MalK OB fold domain EML4058_14520 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14525 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14530 PF13416 Bacterial extracellular solute-binding protein EML4058_14540 PF02311 AraC-like ligand binding domain EML4058_14540 PF12833 Helix-turn-helix domain EML4058_14545 PF07690 Major Facilitator Superfamily EML4058_14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_14550 PF03466 LysR substrate binding domain EML4058_14555 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EML4058_14565 PF03480 Bacterial extracellular solute-binding protein, family 7 EML4058_14570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EML4058_14570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EML4058_14585 PF00356 Bacterial regulatory proteins, lacI family EML4058_14590 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_14590 PF16912 Glucose dehydrogenase C-terminus EML4058_14605 PF00294 pfkB family carbohydrate kinase EML4058_14610 PF08013 Tagatose 6 phosphate kinase EML4058_14615 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14620 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14625 PF00005 ABC transporter EML4058_14625 PF08402 TOBE domain EML4058_14630 PF17912 MalK OB fold domain EML4058_14630 PF00005 ABC transporter EML4058_14635 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14640 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14645 PF01547 Bacterial extracellular solute-binding protein EML4058_14650 PF01053 Cys/Met metabolism PLP-dependent enzyme EML4058_14665 PF01297 Zinc-uptake complex component A periplasmic EML4058_14670 PF00950 ABC 3 transport family EML4058_14675 PF00005 ABC transporter EML4058_14680 PF07683 Cobalamin synthesis protein cobW C-terminal domain EML4058_14680 PF02492 CobW/HypB/UreG, nucleotide-binding domain EML4058_14695 PF07683 Cobalamin synthesis protein cobW C-terminal domain EML4058_14695 PF02492 CobW/HypB/UreG, nucleotide-binding domain EML4058_14700 PF13416 Bacterial extracellular solute-binding protein EML4058_14705 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14710 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14715 PF00005 ABC transporter EML4058_14715 PF08402 TOBE domain EML4058_14730 PF03922 OmpW family EML4058_14750 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EML4058_14750 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EML4058_14755 PF03466 LysR substrate binding domain EML4058_14755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_14760 PF13407 Periplasmic binding protein domain EML4058_14765 PF02653 Branched-chain amino acid transport system / permease component EML4058_14770 PF00005 ABC transporter EML4058_14775 PF08361 MAATS-type transcriptional repressor, C-terminal region EML4058_14775 PF00440 Bacterial regulatory proteins, tetR family EML4058_14780 PF00873 AcrB/AcrD/AcrF family EML4058_14785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EML4058_14785 PF00529 HlyD membrane-fusion protein of T1SS EML4058_14790 PF00563 EAL domain EML4058_14790 PF05231 MASE1 EML4058_14790 PF08448 PAS fold EML4058_14790 PF13426 PAS domain EML4058_14790 PF00990 Diguanylate cyclase, GGDEF domain EML4058_14790 PF08447 PAS fold EML4058_14795 PF05899 Protein of unknown function (DUF861) EML4058_14795 PF07883 Cupin domain EML4058_14805 PF08448 PAS fold EML4058_14805 PF00990 Diguanylate cyclase, GGDEF domain EML4058_14805 PF00563 EAL domain EML4058_14805 PF08447 PAS fold EML4058_14810 PF02615 Malate/L-lactate dehydrogenase EML4058_14815 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EML4058_14815 PF17854 FtsK alpha domain EML4058_14815 PF01580 FtsK/SpoIIIE family EML4058_14815 PF09397 Ftsk gamma domain EML4058_14825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_14830 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14835 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_14840 PF00005 ABC transporter EML4058_14845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_14845 PF00005 ABC transporter EML4058_14850 PF00266 Aminotransferase class-V EML4058_14860 PF00920 Dehydratase family EML4058_14870 PF13407 Periplasmic binding protein domain EML4058_14875 PF00005 ABC transporter EML4058_14880 PF02653 Branched-chain amino acid transport system / permease component EML4058_14885 PF02653 Branched-chain amino acid transport system / permease component EML4058_14890 PF07729 FCD domain EML4058_14890 PF00392 Bacterial regulatory proteins, gntR family EML4058_14900 PF07733 Bacterial DNA polymerase III alpha NTPase domain EML4058_14900 PF02811 PHP domain EML4058_14900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EML4058_14900 PF01336 OB-fold nucleic acid binding domain EML4058_14900 PF14579 Helix-hairpin-helix motif EML4058_14920 PF05161 MOFRL family EML4058_14920 PF13660 Domain of unknown function (DUF4147) EML4058_14930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_14930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_14940 PF00005 ABC transporter EML4058_14940 PF17912 MalK OB fold domain EML4058_14940 PF03459 TOBE domain EML4058_14945 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14950 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_14955 PF01547 Bacterial extracellular solute-binding protein EML4058_14965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_14975 PF01425 Amidase EML4058_14980 PF00563 EAL domain EML4058_14980 PF08448 PAS fold EML4058_14980 PF08447 PAS fold EML4058_14980 PF00990 Diguanylate cyclase, GGDEF domain EML4058_14985 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_14995 PF03776 Septum formation topological specificity factor MinE EML4058_15000 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EML4058_15005 PF03775 Septum formation inhibitor MinC, C-terminal domain EML4058_15005 PF05209 Septum formation inhibitor MinC, N-terminal domain EML4058_15010 PF13419 Haloacid dehalogenase-like hydrolase EML4058_15015 PF00392 Bacterial regulatory proteins, gntR family EML4058_15015 PF07729 FCD domain EML4058_15020 PF03480 Bacterial extracellular solute-binding protein, family 7 EML4058_15030 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EML4058_15035 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_15035 PF00107 Zinc-binding dehydrogenase EML4058_15040 PF03786 D-mannonate dehydratase (UxuA) EML4058_15050 PF00171 Aldehyde dehydrogenase family EML4058_15055 PF03480 Bacterial extracellular solute-binding protein, family 7 EML4058_15060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EML4058_15065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_15065 PF00005 ABC transporter EML4058_15070 PF03841 L-seryl-tRNA selenium transferase EML4058_15085 PF01979 Amidohydrolase family EML4058_15090 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_15090 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15095 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_15105 PF13439 Glycosyltransferase Family 4 EML4058_15105 PF00534 Glycosyl transferases group 1 EML4058_15110 PF02563 Polysaccharide biosynthesis/export protein EML4058_15115 PF13533 Biotin-lipoyl like EML4058_15120 PF00873 AcrB/AcrD/AcrF family EML4058_15130 PF13018 Extended Signal Peptide of Type V secretion system EML4058_15135 PF01613 Flavin reductase like domain EML4058_15140 PF00248 Aldo/keto reductase family EML4058_15145 PF00296 Luciferase-like monooxygenase EML4058_15155 PF00005 ABC transporter EML4058_15155 PF08402 TOBE domain EML4058_15160 PF01547 Bacterial extracellular solute-binding protein EML4058_15165 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15170 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15175 PF01055 Glycosyl hydrolases family 31 EML4058_15180 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15185 PF09084 NMT1/THI5 like EML4058_15190 PF02110 Hydroxyethylthiazole kinase family EML4058_15195 PF02581 Thiamine monophosphate synthase EML4058_15200 PF08543 Phosphomethylpyrimidine kinase EML4058_15205 PF01037 Lrp/AsnC ligand binding domain EML4058_15210 PF01168 Alanine racemase, N-terminal domain EML4058_15210 PF00842 Alanine racemase, C-terminal domain EML4058_15215 PF01266 FAD dependent oxidoreductase EML4058_15230 PF02954 Bacterial regulatory protein, Fis family EML4058_15230 PF00072 Response regulator receiver domain EML4058_15230 PF00158 Sigma-54 interaction domain EML4058_15235 PF02743 Cache domain EML4058_15235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_15235 PF00512 His Kinase A (phospho-acceptor) domain EML4058_15240 PF00375 Sodium:dicarboxylate symporter family EML4058_15245 PF00892 EamA-like transporter family EML4058_15250 PF00202 Aminotransferase class-III EML4058_15265 PF01546 Peptidase family M20/M25/M40 EML4058_15265 PF07687 Peptidase dimerisation domain EML4058_15275 PF01270 Glycosyl hydrolases family 8 EML4058_15285 PF00535 Glycosyl transferase family 2 EML4058_15285 PF07238 PilZ domain EML4058_15285 PF03552 Cellulose synthase EML4058_15315 PF16363 GDP-mannose 4,6 dehydratase EML4058_15320 PF16363 GDP-mannose 4,6 dehydratase EML4058_15330 PF00196 Bacterial regulatory proteins, luxR family EML4058_15330 PF00072 Response regulator receiver domain EML4058_15345 PF00664 ABC transporter transmembrane region EML4058_15345 PF00005 ABC transporter EML4058_15350 PF00529 HlyD membrane-fusion protein of T1SS EML4058_15365 PF02563 Polysaccharide biosynthesis/export protein EML4058_15370 PF02397 Bacterial sugar transferase EML4058_15380 PF00202 Aminotransferase class-III EML4058_15385 PF00672 HAMP domain EML4058_15385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_15390 PF03734 L,D-transpeptidase catalytic domain EML4058_15390 PF17969 L,D-transpeptidase C-terminal domain EML4058_15390 PF01476 LysM domain EML4058_15410 PF02245 Methylpurine-DNA glycosylase (MPG) EML4058_15425 PF00356 Bacterial regulatory proteins, lacI family EML4058_15430 PF01547 Bacterial extracellular solute-binding protein EML4058_15435 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15440 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15445 PF03459 TOBE domain EML4058_15445 PF17912 MalK OB fold domain EML4058_15445 PF00005 ABC transporter EML4058_15455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_15455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_15460 PF04055 Radical SAM superfamily EML4058_15465 PF01242 6-pyruvoyl tetrahydropterin synthase EML4058_15470 PF06508 Queuosine biosynthesis protein QueC EML4058_15475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_15475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_15485 PF00005 ABC transporter EML4058_15485 PF17912 MalK OB fold domain EML4058_15490 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15495 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15500 PF01547 Bacterial extracellular solute-binding protein EML4058_15505 PF01050 Mannose-6-phosphate isomerase EML4058_15505 PF00483 Nucleotidyl transferase EML4058_15510 PF01011 PQQ enzyme repeat EML4058_15515 PF03466 LysR substrate binding domain EML4058_15515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_15520 PF03949 Malic enzyme, NAD binding domain EML4058_15520 PF01515 Phosphate acetyl/butaryl transferase EML4058_15520 PF00390 Malic enzyme, N-terminal domain EML4058_15525 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_15530 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15535 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15540 PF00005 ABC transporter EML4058_15545 PF03972 MmgE/PrpD family EML4058_15550 PF00296 Luciferase-like monooxygenase EML4058_15555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_15555 PF08447 PAS fold EML4058_15555 PF13426 PAS domain EML4058_15560 PF01266 FAD dependent oxidoreductase EML4058_15575 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EML4058_15580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EML4058_15585 PF03480 Bacterial extracellular solute-binding protein, family 7 EML4058_15590 PF07722 Peptidase C26 EML4058_15595 PF02653 Branched-chain amino acid transport system / permease component EML4058_15600 PF00005 ABC transporter EML4058_15605 PF13407 Periplasmic binding protein domain EML4058_15610 PF01546 Peptidase family M20/M25/M40 EML4058_15615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_15625 PF00005 ABC transporter EML4058_15625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_15630 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_15630 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15635 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15640 PF03466 LysR substrate binding domain EML4058_15640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_15645 PF00529 HlyD membrane-fusion protein of T1SS EML4058_15645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EML4058_15650 PF00005 ABC transporter EML4058_15650 PF00664 ABC transporter transmembrane region EML4058_15670 PF12680 SnoaL-like domain EML4058_15670 PF04542 Sigma-70 region 2 EML4058_15670 PF08281 Sigma-70, region 4 EML4058_15675 PF00005 ABC transporter EML4058_15680 PF01032 FecCD transport family EML4058_15695 PF01209 ubiE/COQ5 methyltransferase family EML4058_15700 PF00127 Copper binding proteins, plastocyanin/azurin family EML4058_15705 PF00005 ABC transporter EML4058_15710 PF01032 FecCD transport family EML4058_15725 PF01546 Peptidase family M20/M25/M40 EML4058_15725 PF07687 Peptidase dimerisation domain EML4058_15730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_15740 PF00171 Aldehyde dehydrogenase family EML4058_15745 PF00180 Isocitrate/isopropylmalate dehydrogenase EML4058_15750 PF00171 Aldehyde dehydrogenase family EML4058_15755 PF01266 FAD dependent oxidoreductase EML4058_15770 PF00202 Aminotransferase class-III EML4058_15780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_15785 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15790 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15790 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_15795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_15795 PF00005 ABC transporter EML4058_15800 PF01037 Lrp/AsnC ligand binding domain EML4058_15805 PF01266 FAD dependent oxidoreductase EML4058_15815 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_15820 PF00005 ABC transporter EML4058_15830 PF07687 Peptidase dimerisation domain EML4058_15830 PF01546 Peptidase family M20/M25/M40 EML4058_15835 PF00296 Luciferase-like monooxygenase EML4058_15840 PF00296 Luciferase-like monooxygenase EML4058_15845 PF02082 Transcriptional regulator EML4058_15855 PF01613 Flavin reductase like domain EML4058_15860 PF00296 Luciferase-like monooxygenase EML4058_15875 PF00296 Luciferase-like monooxygenase EML4058_15880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EML4058_15880 PF02770 Acyl-CoA dehydrogenase, middle domain EML4058_15880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EML4058_15890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_15895 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15900 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_15905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_15905 PF00005 ABC transporter EML4058_15910 PF00005 ABC transporter EML4058_15910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_15915 PF00248 Aldo/keto reductase family EML4058_15920 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EML4058_15920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EML4058_15925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_15925 PF03466 LysR substrate binding domain EML4058_15930 PF00296 Luciferase-like monooxygenase EML4058_15945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_15950 PF01546 Peptidase family M20/M25/M40 EML4058_15950 PF07687 Peptidase dimerisation domain EML4058_15955 PF00296 Luciferase-like monooxygenase EML4058_15960 PF05368 NmrA-like family EML4058_15970 PF00296 Luciferase-like monooxygenase EML4058_15975 PF00296 Luciferase-like monooxygenase EML4058_15980 PF13378 Enolase C-terminal domain-like EML4058_15980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EML4058_15990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_15995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_15995 PF00005 ABC transporter EML4058_16000 PF00005 ABC transporter EML4058_16000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_16005 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_16005 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_16010 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_16020 PF07729 FCD domain EML4058_16020 PF00392 Bacterial regulatory proteins, gntR family EML4058_16030 PF00561 alpha/beta hydrolase fold EML4058_16045 PF00753 Metallo-beta-lactamase superfamily EML4058_16045 PF04273 Putative phosphatase (DUF442) EML4058_16055 PF04143 Sulphur transport EML4058_16065 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EML4058_16065 PF01676 Metalloenzyme superfamily EML4058_16070 PF00364 Biotin-requiring enzyme EML4058_16070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EML4058_16070 PF02817 e3 binding domain EML4058_16075 PF02779 Transketolase, pyrimidine binding domain EML4058_16075 PF02780 Transketolase, C-terminal domain EML4058_16080 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal EML4058_16080 PF00676 Dehydrogenase E1 component EML4058_16085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EML4058_16085 PF02770 Acyl-CoA dehydrogenase, middle domain EML4058_16085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EML4058_16090 PF00108 Thiolase, N-terminal domain EML4058_16090 PF02803 Thiolase, C-terminal domain EML4058_16095 PF01037 Lrp/AsnC ligand binding domain EML4058_16100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EML4058_16100 PF02770 Acyl-CoA dehydrogenase, middle domain EML4058_16100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EML4058_16105 PF01039 Carboxyl transferase domain EML4058_16110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EML4058_16110 PF02785 Biotin carboxylase C-terminal domain EML4058_16110 PF00364 Biotin-requiring enzyme EML4058_16110 PF00289 Biotin carboxylase, N-terminal domain EML4058_16115 PF00682 HMGL-like EML4058_16120 PF00378 Enoyl-CoA hydratase/isomerase EML4058_16125 PF02569 Pantoate-beta-alanine ligase EML4058_16130 PF02548 Ketopantoate hydroxymethyltransferase EML4058_16135 PF01261 Xylose isomerase-like TIM barrel EML4058_16140 PF00596 Class II Aldolase and Adducin N-terminal domain EML4058_16145 PF08220 DeoR-like helix-turn-helix domain EML4058_16145 PF00455 DeoR C terminal sensor domain EML4058_16150 PF13407 Periplasmic binding protein domain EML4058_16155 PF00005 ABC transporter EML4058_16160 PF02653 Branched-chain amino acid transport system / permease component EML4058_16165 PF02653 Branched-chain amino acid transport system / permease component EML4058_16170 PF05336 L-rhamnose mutarotase EML4058_16180 PF00561 alpha/beta hydrolase fold EML4058_16190 PF00990 Diguanylate cyclase, GGDEF domain EML4058_16190 PF00563 EAL domain EML4058_16190 PF08448 PAS fold EML4058_16190 PF08447 PAS fold EML4058_16200 PF00171 Aldehyde dehydrogenase family EML4058_16210 PF00005 ABC transporter EML4058_16215 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_16220 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_16245 PF08241 Methyltransferase domain EML4058_16255 PF00795 Carbon-nitrogen hydrolase EML4058_16260 PF00462 Glutaredoxin EML4058_16270 PF08241 Methyltransferase domain EML4058_16285 PF00293 NUDIX domain EML4058_16290 PF13508 Acetyltransferase (GNAT) domain EML4058_16290 PF00583 Acetyltransferase (GNAT) family EML4058_16295 PF01960 ArgJ family EML4058_16305 PF07516 SecA Wing and Scaffold domain EML4058_16305 PF07517 SecA DEAD-like domain EML4058_16305 PF01043 SecA preprotein cross-linking domain EML4058_16305 PF02810 SEC-C motif EML4058_16310 PF00892 EamA-like transporter family EML4058_16315 PF01757 Acyltransferase family EML4058_16345 PF00248 Aldo/keto reductase family EML4058_16350 PF03786 D-mannonate dehydratase (UxuA) EML4058_16355 PF08125 Mannitol dehydrogenase C-terminal domain EML4058_16355 PF01232 Mannitol dehydrogenase Rossmann domain EML4058_16360 PF00106 short chain dehydrogenase EML4058_16365 PF07729 FCD domain EML4058_16365 PF00392 Bacterial regulatory proteins, gntR family EML4058_16375 PF02653 Branched-chain amino acid transport system / permease component EML4058_16380 PF02653 Branched-chain amino acid transport system / permease component EML4058_16385 PF00005 ABC transporter EML4058_16410 PF00149 Calcineurin-like phosphoesterase EML4058_16415 PF02734 DAK2 domain EML4058_16415 PF02733 Dak1 domain EML4058_16420 PF03600 Citrate transporter EML4058_16420 PF02080 TrkA-C domain EML4058_16440 PF13439 Glycosyltransferase Family 4 EML4058_16450 PF01943 Polysaccharide biosynthesis protein EML4058_16455 PF00534 Glycosyl transferases group 1 EML4058_16455 PF13579 Glycosyl transferase 4-like domain EML4058_16475 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EML4058_16475 PF02706 Chain length determinant protein EML4058_16475 PF13807 G-rich domain on putative tyrosine kinase EML4058_16495 PF13439 Glycosyltransferase Family 4 EML4058_16495 PF00534 Glycosyl transferases group 1 EML4058_16500 PF13439 Glycosyltransferase Family 4 EML4058_16500 PF00534 Glycosyl transferases group 1 EML4058_16515 PF03449 Transcription elongation factor, N-terminal EML4058_16515 PF01272 Transcription elongation factor, GreA/GreB, C-term EML4058_16520 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) EML4058_16520 PF00722 Glycosyl hydrolases family 16 EML4058_16550 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding EML4058_16565 PF01381 Helix-turn-helix EML4058_16575 PF00005 ABC transporter EML4058_16580 PF02653 Branched-chain amino acid transport system / permease component EML4058_16585 PF13407 Periplasmic binding protein domain EML4058_16595 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EML4058_16595 PF01266 FAD dependent oxidoreductase EML4058_16605 PF02310 B12 binding domain EML4058_16605 PF01642 Methylmalonyl-CoA mutase EML4058_16610 PF18140 Propionyl-coenzyme A carboxylase BT domain EML4058_16610 PF02785 Biotin carboxylase C-terminal domain EML4058_16610 PF00289 Biotin carboxylase, N-terminal domain EML4058_16610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EML4058_16610 PF00364 Biotin-requiring enzyme EML4058_16620 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family EML4058_16630 PF02798 Glutathione S-transferase, N-terminal domain EML4058_16635 PF01039 Carboxyl transferase domain EML4058_16640 PF01381 Helix-turn-helix EML4058_16640 PF09856 Predicted transcriptional regulator (DUF2083) EML4058_16640 PF06114 IrrE N-terminal-like domain EML4058_16645 PF06029 AlkA N-terminal domain EML4058_16645 PF02805 Metal binding domain of Ada EML4058_16645 PF12833 Helix-turn-helix domain EML4058_16645 PF00730 HhH-GPD superfamily base excision DNA repair protein EML4058_16650 PF00749 tRNA synthetases class I (E and Q), catalytic domain EML4058_16660 PF00106 short chain dehydrogenase EML4058_16670 PF01923 Cobalamin adenosyltransferase EML4058_16680 PF01012 Electron transfer flavoprotein domain EML4058_16685 PF00766 Electron transfer flavoprotein FAD-binding domain EML4058_16685 PF01012 Electron transfer flavoprotein domain EML4058_16690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EML4058_16690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EML4058_16695 PF08534 Redoxin EML4058_16700 PF00206 Lyase EML4058_16700 PF14698 Argininosuccinate lyase C-terminal EML4058_16710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EML4058_16710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EML4058_16720 PF00072 Response regulator receiver domain EML4058_16725 PF00156 Phosphoribosyl transferase domain EML4058_16735 PF00005 ABC transporter EML4058_16755 PF04752 ChaC-like protein EML4058_16765 PF02153 Prephenate dehydrogenase EML4058_16770 PF00155 Aminotransferase class I and II EML4058_16775 PF01209 ubiE/COQ5 methyltransferase family EML4058_16780 PF16123 Hydroxyacylglutathione hydrolase C-terminus EML4058_16780 PF00753 Metallo-beta-lactamase superfamily EML4058_16795 PF00830 Ribosomal L28 family EML4058_16800 PF02592 Putative vitamin uptake transporter EML4058_16815 PF06213 Cobalamin biosynthesis protein CobT EML4058_16815 PF11775 Cobalamin biosynthesis protein CobT VWA domain EML4058_16820 PF12556 Cobaltochelatase CobS subunit N terminal EML4058_16820 PF08406 CbbQ/NirQ/NorQ C-terminal EML4058_16820 PF07728 AAA domain (dynein-related subfamily) EML4058_16825 PF00226 DnaJ domain EML4058_16830 PF01722 BolA-like protein EML4058_16835 PF01761 3-dehydroquinate synthase EML4058_16840 PF01202 Shikimate kinase EML4058_16850 PF00589 Phage integrase family EML4058_16850 PF02899 Phage integrase, N-terminal SAM-like domain EML4058_16855 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EML4058_16860 PF03734 L,D-transpeptidase catalytic domain EML4058_16865 PF01206 Sulfurtransferase TusA EML4058_16865 PF00581 Rhodanese-like domain EML4058_16870 PF07683 Cobalamin synthesis protein cobW C-terminal domain EML4058_16870 PF02492 CobW/HypB/UreG, nucleotide-binding domain EML4058_16875 PF00768 D-alanyl-D-alanine carboxypeptidase EML4058_16875 PF07943 Penicillin-binding protein 5, C-terminal domain EML4058_16880 PF07687 Peptidase dimerisation domain EML4058_16880 PF01546 Peptidase family M20/M25/M40 EML4058_16890 PF01165 Ribosomal protein S21 EML4058_16915 PF04717 Type VI secretion system, phage-baseplate injector EML4058_16940 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) EML4058_16960 PF00583 Acetyltransferase (GNAT) family EML4058_16995 PF00561 alpha/beta hydrolase fold EML4058_17000 PF00106 short chain dehydrogenase EML4058_17005 PF02082 Transcriptional regulator EML4058_17010 PF02261 Aspartate decarboxylase EML4058_17025 PF00550 Phosphopantetheine attachment site EML4058_17025 PF00501 AMP-binding enzyme EML4058_17025 PF13193 AMP-binding enzyme C-terminal domain EML4058_17025 PF00668 Condensation domain EML4058_17035 PF00668 Condensation domain EML4058_17035 PF00550 Phosphopantetheine attachment site EML4058_17035 PF00109 Beta-ketoacyl synthase, N-terminal domain EML4058_17035 PF00698 Acyl transferase domain EML4058_17035 PF02801 Beta-ketoacyl synthase, C-terminal domain EML4058_17035 PF16197 Ketoacyl-synthetase C-terminal extension EML4058_17040 PF00501 AMP-binding enzyme EML4058_17045 PF00501 AMP-binding enzyme EML4058_17045 PF13193 AMP-binding enzyme C-terminal domain EML4058_17045 PF00668 Condensation domain EML4058_17045 PF00550 Phosphopantetheine attachment site EML4058_17050 PF13649 Methyltransferase domain EML4058_17055 PF00501 AMP-binding enzyme EML4058_17055 PF16197 Ketoacyl-synthetase C-terminal extension EML4058_17055 PF00202 Aminotransferase class-III EML4058_17055 PF13193 AMP-binding enzyme C-terminal domain EML4058_17055 PF00109 Beta-ketoacyl synthase, N-terminal domain EML4058_17055 PF02801 Beta-ketoacyl synthase, C-terminal domain EML4058_17055 PF00668 Condensation domain EML4058_17055 PF00550 Phosphopantetheine attachment site EML4058_17075 PF02801 Beta-ketoacyl synthase, C-terminal domain EML4058_17075 PF00109 Beta-ketoacyl synthase, N-terminal domain EML4058_17075 PF16197 Ketoacyl-synthetase C-terminal extension EML4058_17075 PF00668 Condensation domain EML4058_17075 PF00698 Acyl transferase domain EML4058_17075 PF00550 Phosphopantetheine attachment site EML4058_17080 PF00501 AMP-binding enzyme EML4058_17080 PF13193 AMP-binding enzyme C-terminal domain EML4058_17080 PF00668 Condensation domain EML4058_17080 PF00550 Phosphopantetheine attachment site EML4058_17085 PF00501 AMP-binding enzyme EML4058_17085 PF00668 Condensation domain EML4058_17085 PF00550 Phosphopantetheine attachment site EML4058_17085 PF13193 AMP-binding enzyme C-terminal domain EML4058_17090 PF00668 Condensation domain EML4058_17090 PF00550 Phosphopantetheine attachment site EML4058_17090 PF13193 AMP-binding enzyme C-terminal domain EML4058_17090 PF00501 AMP-binding enzyme EML4058_17090 PF00550 Phosphopantetheine attachment site EML4058_17090 PF07993 Male sterility protein EML4058_17090 PF00668 Condensation domain EML4058_17090 PF00501 AMP-binding enzyme EML4058_17090 PF07993 Male sterility protein EML4058_17090 PF13193 AMP-binding enzyme C-terminal domain EML4058_17105 PF07715 TonB-dependent Receptor Plug Domain EML4058_17110 PF01497 Periplasmic binding protein EML4058_17115 PF01032 FecCD transport family EML4058_17120 PF01032 FecCD transport family EML4058_17125 PF00005 ABC transporter EML4058_17140 PF06832 Penicillin-Binding Protein C-terminus Family EML4058_17140 PF00912 Transglycosylase EML4058_17140 PF00905 Penicillin binding protein transpeptidase domain EML4058_17145 PF01835 MG2 domain EML4058_17145 PF17962 Bacterial macroglobulin domain 6 EML4058_17145 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain EML4058_17145 PF11974 Bacterial alpha-2-macroglobulin MG3 domain EML4058_17145 PF07678 A-macroglobulin TED domain EML4058_17145 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain EML4058_17145 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain EML4058_17145 PF07703 Alpha-2-macroglobulin bait region domain EML4058_17145 PF00207 Alpha-2-macroglobulin family EML4058_17150 PF03966 Trm112p-like protein EML4058_17160 PF00085 Thioredoxin EML4058_17175 PF02798 Glutathione S-transferase, N-terminal domain EML4058_17200 PF01842 ACT domain EML4058_17200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_17200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EML4058_17210 PF13505 Outer membrane protein beta-barrel domain EML4058_17215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EML4058_17215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EML4058_17215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EML4058_17215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EML4058_17220 PF00004 ATPase family associated with various cellular activities (AAA) EML4058_17220 PF17862 AAA+ lid domain EML4058_17220 PF06480 FtsH Extracellular EML4058_17220 PF01434 Peptidase family M41 EML4058_17225 PF01171 PP-loop family EML4058_17235 PF00691 OmpA family EML4058_17240 PF04052 TolB amino-terminal domain EML4058_17240 PF07676 WD40-like Beta Propeller Repeat EML4058_17250 PF02472 Biopolymer transport protein ExbD/TolR EML4058_17255 PF01618 MotA/TolQ/ExbB proton channel family EML4058_17260 PF03061 Thioesterase superfamily EML4058_17270 PF00293 NUDIX domain EML4058_17285 PF05496 Holliday junction DNA helicase RuvB P-loop domain EML4058_17285 PF05491 RuvB C-terminal winged helix domain EML4058_17285 PF17864 RuvB AAA lid domain EML4058_17290 PF07499 RuvA, C-terminal domain EML4058_17290 PF01330 RuvA N terminal domain EML4058_17295 PF02075 Crossover junction endodeoxyribonuclease RuvC EML4058_17300 PF00672 HAMP domain EML4058_17300 PF02203 Tar ligand binding domain homologue EML4058_17300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_17305 PF00296 Luciferase-like monooxygenase EML4058_17310 PF01709 Transcriptional regulator EML4058_17325 PF13277 YmdB-like protein EML4058_17335 PF00571 CBS domain EML4058_17335 PF03471 Transporter associated domain EML4058_17335 PF01595 Cyclin M transmembrane N-terminal domain EML4058_17355 PF02780 Transketolase, C-terminal domain EML4058_17355 PF02779 Transketolase, pyrimidine binding domain EML4058_17355 PF00456 Transketolase, thiamine diphosphate binding domain EML4058_17360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EML4058_17360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EML4058_17365 PF03471 Transporter associated domain EML4058_17365 PF00999 Sodium/hydrogen exchanger family EML4058_17365 PF02080 TrkA-C domain EML4058_17370 PF00162 Phosphoglycerate kinase EML4058_17375 PF00274 Fructose-bisphosphate aldolase class-I EML4058_17400 PF01197 Ribosomal protein L31 EML4058_17405 PF00005 ABC transporter EML4058_17405 PF00664 ABC transporter transmembrane region EML4058_17410 PF00890 FAD binding domain EML4058_17415 PF01389 OmpA-like transmembrane domain EML4058_17415 PF00691 OmpA family EML4058_17425 PF00459 Inositol monophosphatase family EML4058_17455 PF00731 AIR carboxylase EML4058_17460 PF02222 ATP-grasp domain EML4058_17460 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EML4058_17465 PF00444 Ribosomal protein L36 EML4058_17475 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) EML4058_17495 PF02887 Pyruvate kinase, alpha/beta domain EML4058_17495 PF00224 Pyruvate kinase, barrel domain EML4058_17500 PF05951 Bacterial protein of unknown function (DUF882) EML4058_17505 PF02954 Bacterial regulatory protein, Fis family EML4058_17505 PF00072 Response regulator receiver domain EML4058_17505 PF00158 Sigma-54 interaction domain EML4058_17510 PF08439 Oligopeptidase F EML4058_17510 PF01432 Peptidase family M3 EML4058_17515 PF01063 Amino-transferase class IV EML4058_17520 PF00990 Diguanylate cyclase, GGDEF domain EML4058_17525 PF03435 Saccharopine dehydrogenase NADP binding domain EML4058_17525 PF16653 Saccharopine dehydrogenase C-terminal domain EML4058_17535 PF02872 5'-nucleotidase, C-terminal domain EML4058_17535 PF00149 Calcineurin-like phosphoesterase EML4058_17540 PF00762 Ferrochelatase EML4058_17545 PF01145 SPFH domain / Band 7 family EML4058_17545 PF16200 C-terminal region of band_7 EML4058_17555 PF00571 CBS domain EML4058_17555 PF01380 SIS domain EML4058_17575 PF00483 Nucleotidyl transferase EML4058_17580 PF13406 Transglycosylase SLT domain EML4058_17590 PF00072 Response regulator receiver domain EML4058_17590 PF00486 Transcriptional regulatory protein, C terminal EML4058_17595 PF00672 HAMP domain EML4058_17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_17595 PF00512 His Kinase A (phospho-acceptor) domain EML4058_17600 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_17600 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EML4058_17610 PF01493 GXGXG motif EML4058_17610 PF01645 Conserved region in glutamate synthase EML4058_17610 PF04898 Glutamate synthase central domain EML4058_17610 PF00310 Glutamine amidotransferases class-II EML4058_17615 PF01212 Beta-eliminating lyase EML4058_17620 PF00486 Transcriptional regulatory protein, C terminal EML4058_17620 PF00072 Response regulator receiver domain EML4058_17625 PF00512 His Kinase A (phospho-acceptor) domain EML4058_17625 PF13493 Domain of unknown function (DUF4118) EML4058_17625 PF02702 Osmosensitive K+ channel His kinase sensor domain EML4058_17625 PF13492 GAF domain EML4058_17625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_17630 PF02669 K+-transporting ATPase, c chain EML4058_17645 PF03814 Potassium-transporting ATPase A subunit EML4058_17655 PF17763 Glutaminase/Asparaginase C-terminal domain EML4058_17655 PF00710 Asparaginase, N-terminal EML4058_17660 PF00324 Amino acid permease EML4058_17665 PF10415 Fumarase C C-terminus EML4058_17665 PF00206 Lyase EML4058_17670 PF07729 FCD domain EML4058_17670 PF00392 Bacterial regulatory proteins, gntR family EML4058_17675 PF00873 AcrB/AcrD/AcrF family EML4058_17685 PF00529 HlyD membrane-fusion protein of T1SS EML4058_17685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EML4058_17695 PF07702 UTRA domain EML4058_17695 PF00392 Bacterial regulatory proteins, gntR family EML4058_17710 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_17715 PF00005 ABC transporter EML4058_17715 PF00571 CBS domain EML4058_17720 PF00221 Aromatic amino acid lyase EML4058_17725 PF07690 Major Facilitator Superfamily EML4058_17735 PF01053 Cys/Met metabolism PLP-dependent enzyme EML4058_17740 PF01037 Lrp/AsnC ligand binding domain EML4058_17745 PF03466 LysR substrate binding domain EML4058_17745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_17750 PF00248 Aldo/keto reductase family EML4058_17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_17755 PF03466 LysR substrate binding domain EML4058_17760 PF00857 Isochorismatase family EML4058_17775 PF05336 L-rhamnose mutarotase EML4058_17780 PF00392 Bacterial regulatory proteins, gntR family EML4058_17780 PF07729 FCD domain EML4058_17785 PF00248 Aldo/keto reductase family EML4058_17790 PF08666 SAF domain EML4058_17790 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EML4058_17795 PF00005 ABC transporter EML4058_17800 PF02653 Branched-chain amino acid transport system / permease component EML4058_17805 PF02653 Branched-chain amino acid transport system / permease component EML4058_17810 PF13407 Periplasmic binding protein domain EML4058_17820 PF08267 Cobalamin-independent synthase, N-terminal domain EML4058_17820 PF01717 Cobalamin-independent synthase, Catalytic domain EML4058_17835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_17835 PF03466 LysR substrate binding domain EML4058_17980 PF03061 Thioesterase superfamily EML4058_18000 PF04168 A predicted alpha-helical domain with a conserved ER motif. EML4058_18000 PF14403 Circularly permuted ATP-grasp type 2 EML4058_18005 PF01841 Transglutaminase-like superfamily EML4058_18005 PF08379 Bacterial transglutaminase-like N-terminal region EML4058_18015 PF12848 ABC transporter EML4058_18015 PF00005 ABC transporter EML4058_18020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_18020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EML4058_18025 PF01070 FMN-dependent dehydrogenase EML4058_18035 PF01047 MarR family EML4058_18045 PF01791 DeoC/LacD family aldolase EML4058_18050 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EML4058_18050 PF01266 FAD dependent oxidoreductase EML4058_18055 PF00248 Aldo/keto reductase family EML4058_18065 PF02653 Branched-chain amino acid transport system / permease component EML4058_18070 PF00005 ABC transporter EML4058_18075 PF13407 Periplasmic binding protein domain EML4058_18085 PF00072 Response regulator receiver domain EML4058_18095 PF00459 Inositol monophosphatase family EML4058_18110 PF00011 Hsp20/alpha crystallin family EML4058_18115 PF13593 SBF-like CPA transporter family (DUF4137) EML4058_18120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_18120 PF03466 LysR substrate binding domain EML4058_18125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EML4058_18125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EML4058_18140 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_18145 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_18150 PF00005 ABC transporter EML4058_18150 PF17912 MalK OB fold domain EML4058_18155 PF00005 ABC transporter EML4058_18155 PF03459 TOBE domain EML4058_18155 PF17912 MalK OB fold domain EML4058_18160 PF01266 FAD dependent oxidoreductase EML4058_18160 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EML4058_18165 PF00455 DeoR C terminal sensor domain EML4058_18165 PF08220 DeoR-like helix-turn-helix domain EML4058_18170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EML4058_18170 PF10414 Sirohaem synthase dimerisation region EML4058_18170 PF14824 Sirohaem biosynthesis protein central EML4058_18175 PF04324 BFD-like [2Fe-2S] binding domain EML4058_18175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EML4058_18175 PF00384 Molybdopterin oxidoreductase EML4058_18175 PF01568 Molydopterin dinucleotide binding domain EML4058_18185 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_18185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EML4058_18185 PF04324 BFD-like [2Fe-2S] binding domain EML4058_18185 PF18267 Rubredoxin NAD+ reductase C-terminal domain EML4058_18185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EML4058_18190 PF00005 ABC transporter EML4058_18195 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_18210 PF08376 Nitrate and nitrite sensing EML4058_18210 PF03861 ANTAR domain EML4058_18215 PF00392 Bacterial regulatory proteins, gntR family EML4058_18215 PF07729 FCD domain EML4058_18220 PF01566 Natural resistance-associated macrophage protein EML4058_18225 PF03746 LamB/YcsF family EML4058_18230 PF07286 Protein of unknown function (DUF1445) EML4058_18235 PF02626 Carboxyltransferase domain, subdomain A and B EML4058_18240 PF00289 Biotin carboxylase, N-terminal domain EML4058_18240 PF02785 Biotin carboxylase C-terminal domain EML4058_18240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EML4058_18240 PF00364 Biotin-requiring enzyme EML4058_18245 PF02806 Alpha amylase, C-terminal all-beta domain EML4058_18245 PF00128 Alpha amylase, catalytic domain EML4058_18250 PF00376 MerR family regulatory protein EML4058_18250 PF09278 MerR, DNA binding EML4058_18255 PF07715 TonB-dependent Receptor Plug Domain EML4058_18255 PF00593 TonB dependent receptor EML4058_18260 PF03466 LysR substrate binding domain EML4058_18260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_18265 PF06772 Bacterial low temperature requirement A protein (LtrA) EML4058_18285 PF11800 Replication protein C C-terminal region EML4058_18285 PF03428 Replication protein C N-terminal domain EML4058_18290 PF02195 ParB-like nuclease domain EML4058_18290 PF07506 RepB plasmid partitioning protein EML4058_18295 PF13614 AAA domain EML4058_18305 PF01042 Endoribonuclease L-PSP EML4058_18310 PF01168 Alanine racemase, N-terminal domain EML4058_18310 PF14031 Putative serine dehydratase domain EML4058_18315 PF07364 Metallopeptidase family M81 EML4058_18315 PF07171 MlrC C-terminus EML4058_18320 PF05962 HutD EML4058_18330 PF17391 Urocanase N-terminal domain EML4058_18330 PF17392 Urocanase C-terminal domain EML4058_18330 PF01175 Urocanase Rossmann-like domain EML4058_18340 PF00221 Aromatic amino acid lyase EML4058_18345 PF01979 Amidohydrolase family EML4058_18350 PF01979 Amidohydrolase family EML4058_18400 PF01266 FAD dependent oxidoreductase EML4058_18405 PF14031 Putative serine dehydratase domain EML4058_18405 PF01168 Alanine racemase, N-terminal domain EML4058_18410 PF02423 Ornithine cyclodeaminase/mu-crystallin family EML4058_18415 PF00171 Aldehyde dehydrogenase family EML4058_18420 PF03466 LysR substrate binding domain EML4058_18420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_18425 PF01266 FAD dependent oxidoreductase EML4058_18430 PF05544 Proline racemase EML4058_18435 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_18440 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_18445 PF00571 CBS domain EML4058_18445 PF00005 ABC transporter EML4058_18455 PF01266 FAD dependent oxidoreductase EML4058_18460 PF00171 Aldehyde dehydrogenase family EML4058_18465 PF00701 Dihydrodipicolinate synthetase family EML4058_18480 PF07729 FCD domain EML4058_18480 PF00392 Bacterial regulatory proteins, gntR family EML4058_18485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_18485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_18490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_18490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_18495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_18495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_18505 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_18510 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_18515 PF00005 ABC transporter EML4058_18515 PF17912 MalK OB fold domain EML4058_18515 PF03459 TOBE domain EML4058_18520 PF00920 Dehydratase family EML4058_18525 PF01370 NAD dependent epimerase/dehydratase family EML4058_18530 PF03737 Aldolase/RraA EML4058_18540 PF03275 UDP-galactopyranose mutase EML4058_18555 PF03466 LysR substrate binding domain EML4058_18555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_18560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EML4058_18575 PF07969 Amidohydrolase family EML4058_18585 PF05977 Transmembrane secretion effector EML4058_18600 PF03466 LysR substrate binding domain EML4058_18600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_18605 PF07690 Major Facilitator Superfamily EML4058_18650 PF13673 Acetyltransferase (GNAT) domain EML4058_18655 PF04055 Radical SAM superfamily EML4058_18655 PF06968 Biotin and Thiamin Synthesis associated domain EML4058_18660 PF00155 Aminotransferase class I and II EML4058_18670 PF00202 Aminotransferase class-III EML4058_18675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EML4058_18675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EML4058_18705 PF00491 Arginase family EML4058_18715 PF13333 Integrase core domain EML4058_18715 PF01527 Transposase EML4058_18715 PF13276 HTH-like domain EML4058_18715 PF00665 Integrase core domain EML4058_18725 PF00892 EamA-like transporter family EML4058_18730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_18730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_18735 PF00211 Adenylate and Guanylate cyclase catalytic domain EML4058_18745 PF07756 Protein of unknown function (DUF1612) EML4058_18745 PF11972 HTH DNA binding domain EML4058_18750 PF00083 Sugar (and other) transporter EML4058_18755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_18755 PF00512 His Kinase A (phospho-acceptor) domain EML4058_18760 PF00072 Response regulator receiver domain EML4058_18760 PF00486 Transcriptional regulatory protein, C terminal EML4058_18765 PF00884 Sulfatase EML4058_18765 PF08019 Phosphoethanolamine transferase EptA/EptB EML4058_18770 PF03466 LysR substrate binding domain EML4058_18770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_18775 PF00593 TonB dependent receptor EML4058_18775 PF07715 TonB-dependent Receptor Plug Domain EML4058_18785 PF01032 FecCD transport family EML4058_18790 PF00005 ABC transporter EML4058_18800 PF00034 Cytochrome c EML4058_18805 PF02631 RecX family EML4058_18810 PF08450 SMP-30/Gluconolactonase/LRE-like region EML4058_18820 PF02653 Branched-chain amino acid transport system / permease component EML4058_18825 PF00005 ABC transporter EML4058_18830 PF13407 Periplasmic binding protein domain EML4058_18835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_18835 PF07730 Histidine kinase EML4058_18840 PF00196 Bacterial regulatory proteins, luxR family EML4058_18840 PF00072 Response regulator receiver domain EML4058_18850 PF07995 Glucose / Sorbosone dehydrogenase EML4058_18860 PF04445 Putative SAM-dependent methyltransferase EML4058_18865 PF00849 RNA pseudouridylate synthase EML4058_18870 PF01205 Uncharacterized protein family UPF0029 EML4058_18875 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_18875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EML4058_18880 PF00005 ABC transporter EML4058_18880 PF00571 CBS domain EML4058_18885 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_18895 PF13426 PAS domain EML4058_18895 PF00072 Response regulator receiver domain EML4058_18900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_18905 PF02706 Chain length determinant protein EML4058_18905 PF13807 G-rich domain on putative tyrosine kinase EML4058_18905 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EML4058_18910 PF00483 Nucleotidyl transferase EML4058_18915 PF00535 Glycosyl transferase family 2 EML4058_18920 PF00535 Glycosyl transferase family 2 EML4058_18925 PF00535 Glycosyl transferase family 2 EML4058_18935 PF00722 Glycosyl hydrolases family 16 EML4058_18940 PF01757 Acyltransferase family EML4058_18945 PF01943 Polysaccharide biosynthesis protein EML4058_18950 PF00535 Glycosyl transferase family 2 EML4058_18955 PF04230 Polysaccharide pyruvyl transferase EML4058_18960 PF00535 Glycosyl transferase family 2 EML4058_18965 PF11089 Exopolysaccharide production repressor EML4058_18980 PF01165 Ribosomal protein S21 EML4058_18985 PF01266 FAD dependent oxidoreductase EML4058_19000 PF08669 Glycine cleavage T-protein C-terminal barrel domain EML4058_19000 PF01571 Aminomethyltransferase folate-binding domain EML4058_19000 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_19000 PF17806 Sarcosine oxidase A3 domain EML4058_19015 PF01575 MaoC like domain EML4058_19020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EML4058_19020 PF00128 Alpha amylase, catalytic domain EML4058_19020 PF18390 Glycogen debranching enzyme C-terminal domain EML4058_19025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EML4058_19025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EML4058_19025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EML4058_19025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EML4058_19030 PF08323 Starch synthase catalytic domain EML4058_19030 PF00534 Glycosyl transferases group 1 EML4058_19035 PF00483 Nucleotidyl transferase EML4058_19040 PF00128 Alpha amylase, catalytic domain EML4058_19040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EML4058_19040 PF02806 Alpha amylase, C-terminal all-beta domain EML4058_19045 PF00343 Carbohydrate phosphorylase EML4058_19055 PF01177 Asp/Glu/Hydantoin racemase EML4058_19060 PF01037 Lrp/AsnC ligand binding domain EML4058_19070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EML4058_19070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EML4058_19080 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_19080 PF00107 Zinc-binding dehydrogenase EML4058_19090 PF00664 ABC transporter transmembrane region EML4058_19090 PF00005 ABC transporter EML4058_19095 PF00005 ABC transporter EML4058_19095 PF00664 ABC transporter transmembrane region EML4058_19100 PF01654 Cytochrome bd terminal oxidase subunit I EML4058_19105 PF02322 Cytochrome bd terminal oxidase subunit II EML4058_19110 PF08173 Membrane bound YbgT-like protein EML4058_19130 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EML4058_19130 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EML4058_19135 PF00890 FAD binding domain EML4058_19135 PF02910 Fumarate reductase flavoprotein C-term EML4058_19140 PF02445 Quinolinate synthetase A protein EML4058_19170 PF02224 Cytidylate kinase EML4058_19175 PF00575 S1 RNA binding domain EML4058_19205 PF00106 short chain dehydrogenase EML4058_19210 PF00557 Metallopeptidase family M24 EML4058_19210 PF01321 Creatinase/Prolidase N-terminal domain EML4058_19215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_19220 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19225 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19225 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_19230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_19230 PF00005 ABC transporter EML4058_19235 PF00005 ABC transporter EML4058_19235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_19240 PF07729 FCD domain EML4058_19240 PF00392 Bacterial regulatory proteins, gntR family EML4058_19245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EML4058_19245 PF13378 Enolase C-terminal domain-like EML4058_19250 PF00296 Luciferase-like monooxygenase EML4058_19265 PF00005 ABC transporter EML4058_19265 PF12399 Branched-chain amino acid ATP-binding cassette transporter EML4058_19270 PF00005 ABC transporter EML4058_19275 PF02653 Branched-chain amino acid transport system / permease component EML4058_19280 PF02653 Branched-chain amino acid transport system / permease component EML4058_19280 PF11862 Domain of unknown function (DUF3382) EML4058_19285 PF05199 GMC oxidoreductase EML4058_19285 PF00732 GMC oxidoreductase EML4058_19290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EML4058_19290 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EML4058_19295 PF00501 AMP-binding enzyme EML4058_19295 PF13193 AMP-binding enzyme C-terminal domain EML4058_19320 PF01011 PQQ enzyme repeat EML4058_19325 PF05974 Domain of unknown function (DUF892) EML4058_19335 PF03275 UDP-galactopyranose mutase EML4058_19355 PF01965 DJ-1/PfpI family EML4058_19375 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EML4058_19375 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EML4058_19380 PF16363 GDP-mannose 4,6 dehydratase EML4058_19385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EML4058_19385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EML4058_19385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EML4058_19395 PF03466 LysR substrate binding domain EML4058_19395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_19400 PF00171 Aldehyde dehydrogenase family EML4058_19405 PF09084 NMT1/THI5 like EML4058_19410 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19415 PF00005 ABC transporter EML4058_19420 PF01619 Proline dehydrogenase EML4058_19420 PF14850 DNA-binding domain of Proline dehydrogenase EML4058_19420 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EML4058_19420 PF00171 Aldehyde dehydrogenase family EML4058_19425 PF01037 Lrp/AsnC ligand binding domain EML4058_19430 PF08281 Sigma-70, region 4 EML4058_19430 PF04542 Sigma-70 region 2 EML4058_19440 PF00072 Response regulator receiver domain EML4058_19445 PF13426 PAS domain EML4058_19445 PF07536 HWE histidine kinase EML4058_19445 PF08447 PAS fold EML4058_19450 PF13426 PAS domain EML4058_19450 PF07536 HWE histidine kinase EML4058_19450 PF13581 Histidine kinase-like ATPase domain EML4058_19460 PF16363 GDP-mannose 4,6 dehydratase EML4058_19475 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EML4058_19480 PF03435 Saccharopine dehydrogenase NADP binding domain EML4058_19480 PF16653 Saccharopine dehydrogenase C-terminal domain EML4058_19485 PF00271 Helicase conserved C-terminal domain EML4058_19485 PF00270 DEAD/DEAH box helicase EML4058_19490 PF13840 ACT domain EML4058_19490 PF00696 Amino acid kinase family EML4058_19490 PF01842 ACT domain EML4058_19495 PF01590 GAF domain EML4058_19495 PF05524 PEP-utilising enzyme, N-terminal EML4058_19495 PF02896 PEP-utilising enzyme, TIM barrel domain EML4058_19495 PF00391 PEP-utilising enzyme, mobile domain EML4058_19500 PF00472 RF-1 domain EML4058_19500 PF03462 PCRF domain EML4058_19505 PF17827 PrmC N-terminal domain EML4058_19505 PF05175 Methyltransferase small domain EML4058_19515 PF00004 ATPase family associated with various cellular activities (AAA) EML4058_19515 PF07724 AAA domain (Cdc48 subfamily) EML4058_19515 PF02861 Clp amino terminal domain, pathogenicity island component EML4058_19515 PF10431 C-terminal, D2-small domain, of ClpB protein EML4058_19515 PF17871 AAA lid domain EML4058_19520 PF10145 Phage-related minor tail protein EML4058_19520 PF01464 Transglycosylase SLT domain EML4058_19520 PF01551 Peptidase family M23 EML4058_19560 PF00701 Dihydrodipicolinate synthetase family EML4058_19565 PF08450 SMP-30/Gluconolactonase/LRE-like region EML4058_19570 PF00392 Bacterial regulatory proteins, gntR family EML4058_19570 PF07729 FCD domain EML4058_19575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_19580 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19585 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_19585 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19590 PF00005 ABC transporter EML4058_19590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_19595 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EML4058_19595 PF13378 Enolase C-terminal domain-like EML4058_19620 PF03358 NADPH-dependent FMN reductase EML4058_19625 PF13649 Methyltransferase domain EML4058_19630 PF01161 Phosphatidylethanolamine-binding protein EML4058_19640 PF00440 Bacterial regulatory proteins, tetR family EML4058_19640 PF02909 Tetracyclin repressor-like, C-terminal domain EML4058_19645 PF07690 Major Facilitator Superfamily EML4058_19650 PF00480 ROK family EML4058_19650 PF01047 MarR family EML4058_19665 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19670 PF00005 ABC transporter EML4058_19670 PF08402 TOBE domain EML4058_19675 PF03009 Glycerophosphoryl diester phosphodiesterase family EML4058_19680 PF00313 'Cold-shock' DNA-binding domain EML4058_19690 PF00109 Beta-ketoacyl synthase, N-terminal domain EML4058_19690 PF02801 Beta-ketoacyl synthase, C-terminal domain EML4058_19705 PF00873 AcrB/AcrD/AcrF family EML4058_19710 PF00106 short chain dehydrogenase EML4058_19720 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_19720 PF17806 Sarcosine oxidase A3 domain EML4058_19720 PF01571 Aminomethyltransferase folate-binding domain EML4058_19720 PF08669 Glycine cleavage T-protein C-terminal barrel domain EML4058_19725 PF04267 Sarcosine oxidase, delta subunit family EML4058_19730 PF01266 FAD dependent oxidoreductase EML4058_19735 PF01965 DJ-1/PfpI family EML4058_19735 PF12833 Helix-turn-helix domain EML4058_19750 PF01493 GXGXG motif EML4058_19755 PF01645 Conserved region in glutamate synthase EML4058_19760 PF00120 Glutamine synthetase, catalytic domain EML4058_19765 PF00551 Formyl transferase EML4058_19770 PF00392 Bacterial regulatory proteins, gntR family EML4058_19770 PF07729 FCD domain EML4058_19780 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19785 PF00005 ABC transporter EML4058_19790 PF00465 Iron-containing alcohol dehydrogenase EML4058_19800 PF12697 Alpha/beta hydrolase family EML4058_19805 PF01613 Flavin reductase like domain EML4058_19810 PF00296 Luciferase-like monooxygenase EML4058_19815 PF00171 Aldehyde dehydrogenase family EML4058_19830 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19835 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19840 PF08402 TOBE domain EML4058_19840 PF00005 ABC transporter EML4058_19845 PF00171 Aldehyde dehydrogenase family EML4058_19855 PF00005 ABC transporter EML4058_19855 PF03459 TOBE domain EML4058_19855 PF17912 MalK OB fold domain EML4058_19860 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19865 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19875 PF04205 FMN-binding domain EML4058_19875 PF00890 FAD binding domain EML4058_19880 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EML4058_19880 PF00356 Bacterial regulatory proteins, lacI family EML4058_19890 PF00005 ABC transporter EML4058_19890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_19895 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19895 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_19900 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_19910 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_19915 PF00005 ABC transporter EML4058_19925 PF04303 PrpF protein EML4058_19930 PF03466 LysR substrate binding domain EML4058_19930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_19940 PF00392 Bacterial regulatory proteins, gntR family EML4058_19940 PF00155 Aminotransferase class I and II EML4058_19955 PF02567 Phenazine biosynthesis-like protein EML4058_19960 PF00293 NUDIX domain EML4058_19965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_19965 PF03466 LysR substrate binding domain EML4058_19975 PF00364 Biotin-requiring enzyme EML4058_19980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EML4058_19980 PF00289 Biotin carboxylase, N-terminal domain EML4058_19980 PF02785 Biotin carboxylase C-terminal domain EML4058_19995 PF02626 Carboxyltransferase domain, subdomain A and B EML4058_20000 PF03746 LamB/YcsF family EML4058_20005 PF00155 Aminotransferase class I and II EML4058_20010 PF03466 LysR substrate binding domain EML4058_20010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_20015 PF00106 short chain dehydrogenase EML4058_20020 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_20025 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_20030 PF00005 ABC transporter EML4058_20035 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_20040 PF03737 Aldolase/RraA EML4058_20055 PF03466 LysR substrate binding domain EML4058_20055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_20065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_20065 PF03466 LysR substrate binding domain EML4058_20070 PF07690 Major Facilitator Superfamily EML4058_20075 PF00296 Luciferase-like monooxygenase EML4058_20080 PF00248 Aldo/keto reductase family EML4058_20085 PF01488 Shikimate / quinate 5-dehydrogenase EML4058_20085 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EML4058_20085 PF08501 Shikimate dehydrogenase substrate binding domain EML4058_20090 PF05199 GMC oxidoreductase EML4058_20090 PF00732 GMC oxidoreductase EML4058_20095 PF12833 Helix-turn-helix domain EML4058_20095 PF02311 AraC-like ligand binding domain EML4058_20100 PF00924 Mechanosensitive ion channel EML4058_20110 PF00196 Bacterial regulatory proteins, luxR family EML4058_20110 PF00072 Response regulator receiver domain EML4058_20130 PF00924 Mechanosensitive ion channel EML4058_20135 PF13493 Domain of unknown function (DUF4118) EML4058_20135 PF00512 His Kinase A (phospho-acceptor) domain EML4058_20135 PF13426 PAS domain EML4058_20135 PF00989 PAS fold EML4058_20135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_20135 PF08447 PAS fold EML4058_20140 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EML4058_20140 PF00072 Response regulator receiver domain EML4058_20140 PF00672 HAMP domain EML4058_20140 PF01627 Hpt domain EML4058_20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_20140 PF00512 His Kinase A (phospho-acceptor) domain EML4058_20145 PF00753 Metallo-beta-lactamase superfamily EML4058_20145 PF16123 Hydroxyacylglutathione hydrolase C-terminus EML4058_20160 PF01266 FAD dependent oxidoreductase EML4058_20170 PF17806 Sarcosine oxidase A3 domain EML4058_20170 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_20170 PF08669 Glycine cleavage T-protein C-terminal barrel domain EML4058_20170 PF01571 Aminomethyltransferase folate-binding domain EML4058_20180 PF00464 Serine hydroxymethyltransferase EML4058_20185 PF00551 Formyl transferase EML4058_20195 PF00440 Bacterial regulatory proteins, tetR family EML4058_20200 PF00107 Zinc-binding dehydrogenase EML4058_20200 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_20205 PF12833 Helix-turn-helix domain EML4058_20210 PF13407 Periplasmic binding protein domain EML4058_20215 PF00005 ABC transporter EML4058_20220 PF02653 Branched-chain amino acid transport system / permease component EML4058_20225 PF00106 short chain dehydrogenase EML4058_20230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EML4058_20230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EML4058_20240 PF08946 Osmosensory transporter coiled coil EML4058_20240 PF00083 Sugar (and other) transporter EML4058_20250 PF02563 Polysaccharide biosynthesis/export protein EML4058_20265 PF14331 ImcF-related N-terminal domain EML4058_20265 PF06744 Type VI secretion protein IcmF C-terminal EML4058_20265 PF06761 Intracellular multiplication and human macrophage-killing EML4058_20270 PF00691 OmpA family EML4058_20275 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE EML4058_20290 PF05947 Type VI secretion system, TssF EML4058_20310 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath EML4058_20315 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 EML4058_20325 PF17871 AAA lid domain EML4058_20325 PF00004 ATPase family associated with various cellular activities (AAA) EML4058_20325 PF10431 C-terminal, D2-small domain, of ClpB protein EML4058_20325 PF07724 AAA domain (Cdc48 subfamily) EML4058_20345 PF04717 Type VI secretion system, phage-baseplate injector EML4058_20370 PF00990 Diguanylate cyclase, GGDEF domain EML4058_20370 PF08447 PAS fold EML4058_20370 PF00563 EAL domain EML4058_20370 PF08448 PAS fold EML4058_20380 PF03471 Transporter associated domain EML4058_20380 PF03741 Integral membrane protein TerC family EML4058_20395 PF17912 MalK OB fold domain EML4058_20395 PF00005 ABC transporter EML4058_20395 PF03459 TOBE domain EML4058_20400 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_20405 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_20410 PF13416 Bacterial extracellular solute-binding protein EML4058_20415 PF01261 Xylose isomerase-like TIM barrel EML4058_20420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_20420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_20425 PF00356 Bacterial regulatory proteins, lacI family EML4058_20440 PF03466 LysR substrate binding domain EML4058_20440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_20450 PF13407 Periplasmic binding protein domain EML4058_20455 PF00005 ABC transporter EML4058_20460 PF02653 Branched-chain amino acid transport system / permease component EML4058_20465 PF02653 Branched-chain amino acid transport system / permease component EML4058_20470 PF00356 Bacterial regulatory proteins, lacI family EML4058_20480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_20480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_20500 PF00034 Cytochrome c EML4058_20515 PF07732 Multicopper oxidase EML4058_20515 PF00394 Multicopper oxidase EML4058_20535 PF00092 von Willebrand factor type A domain EML4058_20540 PF08406 CbbQ/NirQ/NorQ C-terminal EML4058_20540 PF07728 AAA domain (dynein-related subfamily) EML4058_20545 PF00115 Cytochrome C and Quinol oxidase polypeptide I EML4058_20550 PF00034 Cytochrome c EML4058_20560 PF00510 Cytochrome c oxidase subunit III EML4058_20575 PF02441 Flavoprotein EML4058_20580 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EML4058_20585 PF04343 Protein of unknown function, DUF488 EML4058_20595 PF01136 Peptidase family U32 EML4058_20625 PF00005 ABC transporter EML4058_20635 PF06796 Periplasmic nitrate reductase protein NapE EML4058_20650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EML4058_20650 PF01568 Molydopterin dinucleotide binding domain EML4058_20650 PF00384 Molybdopterin oxidoreductase EML4058_20655 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) EML4058_20660 PF03264 NapC/NirT cytochrome c family, N-terminal region EML4058_20665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_20665 PF03466 LysR substrate binding domain EML4058_20675 PF00664 ABC transporter transmembrane region EML4058_20675 PF00005 ABC transporter EML4058_20680 PF00529 HlyD membrane-fusion protein of T1SS EML4058_20680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EML4058_20690 PF17837 4'-phosphopantetheinyl transferase N-terminal domain EML4058_20690 PF01648 4'-phosphopantetheinyl transferase superfamily EML4058_20695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EML4058_20695 PF02770 Acyl-CoA dehydrogenase, middle domain EML4058_20695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EML4058_20700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_20700 PF03466 LysR substrate binding domain EML4058_20705 PF00356 Bacterial regulatory proteins, lacI family EML4058_20715 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_20725 PF00005 ABC transporter EML4058_20725 PF08402 TOBE domain EML4058_20735 PF13382 Adenine deaminase C-terminal domain EML4058_20735 PF01979 Amidohydrolase family EML4058_20740 PF03796 DnaB-like helicase C terminal domain EML4058_20745 PF01546 Peptidase family M20/M25/M40 EML4058_20745 PF07687 Peptidase dimerisation domain EML4058_20755 PF01244 Membrane dipeptidase (Peptidase family M19) EML4058_20760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_20765 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_20770 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_20770 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_20775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_20775 PF00005 ABC transporter EML4058_20780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_20780 PF00005 ABC transporter EML4058_20790 PF03466 LysR substrate binding domain EML4058_20790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_20795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_20800 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_20805 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_20805 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_20810 PF01425 Amidase EML4058_20815 PF01965 DJ-1/PfpI family EML4058_20825 PF07687 Peptidase dimerisation domain EML4058_20825 PF01546 Peptidase family M20/M25/M40 EML4058_20830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_20830 PF00005 ABC transporter EML4058_20835 PF04198 Putative sugar-binding domain EML4058_20845 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_20850 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_20855 PF00005 ABC transporter EML4058_20855 PF08402 TOBE domain EML4058_20860 PF08125 Mannitol dehydrogenase C-terminal domain EML4058_20860 PF01232 Mannitol dehydrogenase Rossmann domain EML4058_20865 PF13419 Haloacid dehalogenase-like hydrolase EML4058_20870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EML4058_20870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EML4058_20875 PF01380 SIS domain EML4058_20875 PF01418 Helix-turn-helix domain, rpiR family EML4058_20885 PF10576 Iron-sulfur binding domain of endonuclease III EML4058_20885 PF00730 HhH-GPD superfamily base excision DNA repair protein EML4058_20885 PF00633 Helix-hairpin-helix motif EML4058_20895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EML4058_20895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EML4058_20910 PF04198 Putative sugar-binding domain EML4058_20910 PF13936 Helix-turn-helix domain EML4058_20915 PF00923 Transaldolase/Fructose-6-phosphate aldolase EML4058_20920 PF09339 IclR helix-turn-helix domain EML4058_20920 PF01614 Bacterial transcriptional regulator EML4058_20935 PF00950 ABC 3 transport family EML4058_20940 PF00950 ABC 3 transport family EML4058_20945 PF00005 ABC transporter EML4058_20950 PF01297 Zinc-uptake complex component A periplasmic EML4058_20960 PF00152 tRNA synthetases class II (D, K and N) EML4058_20960 PF01336 OB-fold nucleic acid binding domain EML4058_20965 PF00749 tRNA synthetases class I (E and Q), catalytic domain EML4058_20970 PF02080 TrkA-C domain EML4058_20970 PF03600 Citrate transporter EML4058_20975 PF03471 Transporter associated domain EML4058_20975 PF03741 Integral membrane protein TerC family EML4058_20980 PF00440 Bacterial regulatory proteins, tetR family EML4058_20985 PF13533 Biotin-lipoyl like EML4058_20990 PF07690 Major Facilitator Superfamily EML4058_21000 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EML4058_21000 PF00356 Bacterial regulatory proteins, lacI family EML4058_21005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EML4058_21005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EML4058_21010 PF01261 Xylose isomerase-like TIM barrel EML4058_21015 PF00232 Glycosyl hydrolase family 1 EML4058_21020 PF00881 Nitroreductase family EML4058_21025 PF09383 NIL domain EML4058_21025 PF00005 ABC transporter EML4058_21030 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21035 PF03180 NLPA lipoprotein EML4058_21040 PF00563 EAL domain EML4058_21040 PF13188 PAS domain EML4058_21040 PF00990 Diguanylate cyclase, GGDEF domain EML4058_21040 PF03707 Bacterial signalling protein N terminal repeat EML4058_21045 PF17773 UPF0176 acylphosphatase like domain EML4058_21045 PF00581 Rhodanese-like domain EML4058_21055 PF01928 CYTH domain EML4058_21060 PF01081 KDPG and KHG aldolase EML4058_21080 PF03824 High-affinity nickel-transport protein EML4058_21100 PF07683 Cobalamin synthesis protein cobW C-terminal domain EML4058_21100 PF02492 CobW/HypB/UreG, nucleotide-binding domain EML4058_21105 PF02633 Creatinine amidohydrolase EML4058_21110 PF01047 MarR family EML4058_21115 PF00356 Bacterial regulatory proteins, lacI family EML4058_21120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_21120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EML4058_21125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_21125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_21130 PF04962 KduI/IolB family EML4058_21135 PF01261 Xylose isomerase-like TIM barrel EML4058_21140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EML4058_21140 PF00205 Thiamine pyrophosphate enzyme, central domain EML4058_21140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EML4058_21145 PF00294 pfkB family carbohydrate kinase EML4058_21155 PF00005 ABC transporter EML4058_21160 PF00005 ABC transporter EML4058_21160 PF12399 Branched-chain amino acid ATP-binding cassette transporter EML4058_21175 PF13458 Periplasmic binding protein EML4058_21185 PF12833 Helix-turn-helix domain EML4058_21195 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_21195 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21200 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_21210 PF00005 ABC transporter EML4058_21210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_21220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EML4058_21220 PF01261 Xylose isomerase-like TIM barrel EML4058_21230 PF01220 Dehydroquinase class II EML4058_21235 PF08501 Shikimate dehydrogenase substrate binding domain EML4058_21235 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EML4058_21240 PF00005 ABC transporter EML4058_21245 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_21250 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_21255 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21260 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21265 PF10397 Adenylosuccinate lyase C-terminus EML4058_21265 PF00206 Lyase EML4058_21270 PF00775 Dioxygenase EML4058_21275 PF00775 Dioxygenase EML4058_21275 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal EML4058_21280 PF02627 Carboxymuconolactone decarboxylase family EML4058_21285 PF00561 alpha/beta hydrolase fold EML4058_21290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_21290 PF03466 LysR substrate binding domain EML4058_21295 PF01494 FAD binding domain EML4058_21305 PF09339 IclR helix-turn-helix domain EML4058_21305 PF01614 Bacterial transcriptional regulator EML4058_21310 PF01144 Coenzyme A transferase EML4058_21315 PF01144 Coenzyme A transferase EML4058_21320 PF00108 Thiolase, N-terminal domain EML4058_21320 PF02803 Thiolase, C-terminal domain EML4058_21325 PF00356 Bacterial regulatory proteins, lacI family EML4058_21330 PF13407 Periplasmic binding protein domain EML4058_21335 PF13407 Periplasmic binding protein domain EML4058_21340 PF01261 Xylose isomerase-like TIM barrel EML4058_21345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_21345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_21355 PF00356 Bacterial regulatory proteins, lacI family EML4058_21360 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21365 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21370 PF17912 MalK OB fold domain EML4058_21370 PF00005 ABC transporter EML4058_21380 PF07470 Glycosyl Hydrolase Family 88 EML4058_21400 PF00480 ROK family EML4058_21400 PF01325 Iron dependent repressor, N-terminal DNA binding domain EML4058_21410 PF17912 MalK OB fold domain EML4058_21410 PF00005 ABC transporter EML4058_21415 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21420 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21425 PF03009 Glycerophosphoryl diester phosphodiesterase family EML4058_21430 PF00459 Inositol monophosphatase family EML4058_21435 PF00106 short chain dehydrogenase EML4058_21440 PF12833 Helix-turn-helix domain EML4058_21440 PF12852 Cupin EML4058_21445 PF00480 ROK family EML4058_21455 PF08402 TOBE domain EML4058_21455 PF00005 ABC transporter EML4058_21460 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21475 PF00037 4Fe-4S binding domain EML4058_21475 PF11953 Domain of unknown function (DUF3470) EML4058_21480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EML4058_21480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EML4058_21510 PF00248 Aldo/keto reductase family EML4058_21515 PF03466 LysR substrate binding domain EML4058_21515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_21525 PF01557 Fumarylacetoacetate (FAA) hydrolase family EML4058_21545 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21550 PF00005 ABC transporter EML4058_21560 PF00664 ABC transporter transmembrane region EML4058_21560 PF00005 ABC transporter EML4058_21590 PF01757 Acyltransferase family EML4058_21595 PF00535 Glycosyl transferase family 2 EML4058_21605 PF01370 NAD dependent epimerase/dehydratase family EML4058_21610 PF00535 Glycosyl transferase family 2 EML4058_21620 PF00483 Nucleotidyl transferase EML4058_21625 PF04321 RmlD substrate binding domain EML4058_21630 PF16363 GDP-mannose 4,6 dehydratase EML4058_21635 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EML4058_21640 PF13361 UvrD-like helicase C-terminal domain EML4058_21640 PF00580 UvrD/REP helicase N-terminal domain EML4058_21645 PF00005 ABC transporter EML4058_21645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_21650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_21650 PF00005 ABC transporter EML4058_21655 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_21655 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21660 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21665 PF07729 FCD domain EML4058_21665 PF00392 Bacterial regulatory proteins, gntR family EML4058_21670 PF03786 D-mannonate dehydratase (UxuA) EML4058_21675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_21685 PF13188 PAS domain EML4058_21685 PF03707 Bacterial signalling protein N terminal repeat EML4058_21685 PF00563 EAL domain EML4058_21685 PF00990 Diguanylate cyclase, GGDEF domain EML4058_21700 PF02735 Ku70/Ku80 beta-barrel domain EML4058_21715 PF01865 Protein of unknown function DUF47 EML4058_21725 PF00873 AcrB/AcrD/AcrF family EML4058_21730 PF13533 Biotin-lipoyl like EML4058_21735 PF00072 Response regulator receiver domain EML4058_21735 PF00486 Transcriptional regulatory protein, C terminal EML4058_21740 PF00672 HAMP domain EML4058_21740 PF00512 His Kinase A (phospho-acceptor) domain EML4058_21740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_21750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_21750 PF03466 LysR substrate binding domain EML4058_21755 PF00141 Peroxidase EML4058_21765 PF12833 Helix-turn-helix domain EML4058_21765 PF10114 Sensory domain found in PocR EML4058_21770 PF00171 Aldehyde dehydrogenase family EML4058_21775 PF03466 LysR substrate binding domain EML4058_21775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_21780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EML4058_21785 PF12411 Choline sulfatase enzyme C terminal EML4058_21785 PF00884 Sulfatase EML4058_21790 PF00294 pfkB family carbohydrate kinase EML4058_21795 PF08402 TOBE domain EML4058_21795 PF00005 ABC transporter EML4058_21800 PF00206 Lyase EML4058_21800 PF14698 Argininosuccinate lyase C-terminal EML4058_21805 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21810 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21815 PF13416 Bacterial extracellular solute-binding protein EML4058_21820 PF00480 ROK family EML4058_21845 PF02056 Family 4 glycosyl hydrolase EML4058_21845 PF11975 Family 4 glycosyl hydrolase C-terminal domain EML4058_21850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_21855 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21860 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_21860 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21865 PF00005 ABC transporter EML4058_21865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_21870 PF02056 Family 4 glycosyl hydrolase EML4058_21870 PF11975 Family 4 glycosyl hydrolase C-terminal domain EML4058_21875 PF13533 Biotin-lipoyl like EML4058_21880 PF00005 ABC transporter EML4058_21900 PF00072 Response regulator receiver domain EML4058_21905 PF00091 Tubulin/FtsZ family, GTPase domain EML4058_21905 PF12327 FtsZ family, C-terminal domain EML4058_21910 PF00392 Bacterial regulatory proteins, gntR family EML4058_21910 PF07729 FCD domain EML4058_21915 PF00701 Dihydrodipicolinate synthetase family EML4058_21920 PF02615 Malate/L-lactate dehydrogenase EML4058_21930 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21935 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21940 PF00005 ABC transporter EML4058_21945 PF01266 FAD dependent oxidoreductase EML4058_21955 PF05544 Proline racemase EML4058_21960 PF00356 Bacterial regulatory proteins, lacI family EML4058_21970 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_21975 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21980 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_21985 PF00005 ABC transporter EML4058_21990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_21990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EML4058_21995 PF00563 EAL domain EML4058_21995 PF03707 Bacterial signalling protein N terminal repeat EML4058_21995 PF00990 Diguanylate cyclase, GGDEF domain EML4058_22000 PF02530 Porin subfamily EML4058_22005 PF01979 Amidohydrolase family EML4058_22010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_22015 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_22020 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_22020 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_22025 PF01979 Amidohydrolase family EML4058_22030 PF01979 Amidohydrolase family EML4058_22035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_22035 PF00005 ABC transporter EML4058_22040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_22040 PF00005 ABC transporter EML4058_22045 PF07729 FCD domain EML4058_22045 PF00392 Bacterial regulatory proteins, gntR family EML4058_22050 PF01613 Flavin reductase like domain EML4058_22055 PF01177 Asp/Glu/Hydantoin racemase EML4058_22060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_22060 PF03466 LysR substrate binding domain EML4058_22070 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EML4058_22070 PF00037 4Fe-4S binding domain EML4058_22070 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EML4058_22075 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EML4058_22075 PF01568 Molydopterin dinucleotide binding domain EML4058_22075 PF00384 Molybdopterin oxidoreductase EML4058_22075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EML4058_22075 PF00037 4Fe-4S binding domain EML4058_22085 PF07690 Major Facilitator Superfamily EML4058_22090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_22095 PF00072 Response regulator receiver domain EML4058_22095 PF00486 Transcriptional regulatory protein, C terminal EML4058_22115 PF05532 CsbD-like EML4058_22120 PF00072 Response regulator receiver domain EML4058_22120 PF00196 Bacterial regulatory proteins, luxR family EML4058_22125 PF07729 FCD domain EML4058_22125 PF00392 Bacterial regulatory proteins, gntR family EML4058_22130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_22135 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_22140 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_22140 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_22150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_22150 PF00005 ABC transporter EML4058_22155 PF05532 CsbD-like EML4058_22165 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EML4058_22165 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EML4058_22170 PF03401 Tripartite tricarboxylate transporter family receptor EML4058_22175 PF00005 ABC transporter EML4058_22175 PF00664 ABC transporter transmembrane region EML4058_22180 PF00005 ABC transporter EML4058_22190 PF00577 Outer membrane usher protein EML4058_22190 PF13954 PapC N-terminal domain EML4058_22190 PF13953 PapC C-terminal domain EML4058_22205 PF11791 Aconitate B N-terminal domain EML4058_22205 PF00330 Aconitase family (aconitate hydratase) EML4058_22205 PF06434 Aconitate hydratase 2 N-terminus EML4058_22210 PF00672 HAMP domain EML4058_22210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_22220 PF00132 Bacterial transferase hexapeptide (six repeats) EML4058_22230 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_22230 PF00107 Zinc-binding dehydrogenase EML4058_22235 PF01590 GAF domain EML4058_22235 PF02954 Bacterial regulatory protein, Fis family EML4058_22235 PF00158 Sigma-54 interaction domain EML4058_22245 PF00356 Bacterial regulatory proteins, lacI family EML4058_22255 PF00005 ABC transporter EML4058_22260 PF02653 Branched-chain amino acid transport system / permease component EML4058_22265 PF02653 Branched-chain amino acid transport system / permease component EML4058_22270 PF01261 Xylose isomerase-like TIM barrel EML4058_22275 PF00485 Phosphoribulokinase / Uridine kinase family EML4058_22280 PF01261 Xylose isomerase-like TIM barrel EML4058_22290 PF00005 ABC transporter EML4058_22295 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_22300 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_22305 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_22310 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EML4058_22315 PF01321 Creatinase/Prolidase N-terminal domain EML4058_22315 PF00557 Metallopeptidase family M24 EML4058_22320 PF02423 Ornithine cyclodeaminase/mu-crystallin family EML4058_22325 PF00291 Pyridoxal-phosphate dependent enzyme EML4058_22330 PF00155 Aminotransferase class I and II EML4058_22330 PF00392 Bacterial regulatory proteins, gntR family EML4058_22335 PF00202 Aminotransferase class-III EML4058_22340 PF00171 Aldehyde dehydrogenase family EML4058_22345 PF01037 Lrp/AsnC ligand binding domain EML4058_22355 PF04244 Deoxyribodipyrimidine photo-lyase-related protein EML4058_22375 PF04199 Putative cyclase EML4058_22380 PF01494 FAD binding domain EML4058_22385 PF00190 Cupin EML4058_22395 PF00196 Bacterial regulatory proteins, luxR family EML4058_22395 PF00072 Response regulator receiver domain EML4058_22400 PF00072 Response regulator receiver domain EML4058_22400 PF00196 Bacterial regulatory proteins, luxR family EML4058_22405 PF13426 PAS domain EML4058_22405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_22405 PF08448 PAS fold EML4058_22405 PF00512 His Kinase A (phospho-acceptor) domain EML4058_22405 PF00072 Response regulator receiver domain EML4058_22410 PF00384 Molybdopterin oxidoreductase EML4058_22415 PF00210 Ferritin-like domain EML4058_22420 PF00561 alpha/beta hydrolase fold EML4058_22435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_22435 PF13426 PAS domain EML4058_22435 PF00072 Response regulator receiver domain EML4058_22440 PF00072 Response regulator receiver domain EML4058_22440 PF00486 Transcriptional regulatory protein, C terminal EML4058_22455 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_22460 PF08402 TOBE domain EML4058_22460 PF00005 ABC transporter EML4058_22465 PF00459 Inositol monophosphatase family EML4058_22475 PF16363 GDP-mannose 4,6 dehydratase EML4058_22480 PF01370 NAD dependent epimerase/dehydratase family EML4058_22505 PF00196 Bacterial regulatory proteins, luxR family EML4058_22505 PF00072 Response regulator receiver domain EML4058_22510 PF02585 GlcNAc-PI de-N-acetylase EML4058_22515 PF00483 Nucleotidyl transferase EML4058_22520 PF08484 C-methyltransferase C-terminal domain EML4058_22520 PF08421 Putative zinc binding domain EML4058_22525 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EML4058_22530 PF09940 Domain of unknown function (DUF2172) EML4058_22530 PF16254 Domain of unknown function (DUF4910) EML4058_22530 PF16221 winged helix-turn-helix EML4058_22535 PF16363 GDP-mannose 4,6 dehydratase EML4058_22540 PF00202 Aminotransferase class-III EML4058_22545 PF00072 Response regulator receiver domain EML4058_22545 PF00196 Bacterial regulatory proteins, luxR family EML4058_22550 PF00072 Response regulator receiver domain EML4058_22550 PF00196 Bacterial regulatory proteins, luxR family EML4058_22570 PF00534 Glycosyl transferases group 1 EML4058_22570 PF13439 Glycosyltransferase Family 4 EML4058_22580 PF00953 Glycosyl transferase family 4 EML4058_22600 PF13439 Glycosyltransferase Family 4 EML4058_22600 PF00534 Glycosyl transferases group 1 EML4058_22605 PF00534 Glycosyl transferases group 1 EML4058_22605 PF13439 Glycosyltransferase Family 4 EML4058_22615 PF01037 Lrp/AsnC ligand binding domain EML4058_22640 PF00501 AMP-binding enzyme EML4058_22640 PF13193 AMP-binding enzyme C-terminal domain EML4058_22650 PF09339 IclR helix-turn-helix domain EML4058_22650 PF01614 Bacterial transcriptional regulator EML4058_22660 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EML4058_22660 PF03480 Bacterial extracellular solute-binding protein, family 7 EML4058_22665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EML4058_22680 PF14659 Phage integrase, N-terminal SAM-like domain EML4058_22680 PF13356 Arm DNA-binding domain EML4058_22680 PF00589 Phage integrase family EML4058_22695 PF00723 Glycosyl hydrolases family 15 EML4058_22695 PF09137 Glucodextranase, domain N EML4058_22700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EML4058_22700 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EML4058_22705 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EML4058_22705 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EML4058_22730 PF08220 DeoR-like helix-turn-helix domain EML4058_22730 PF00455 DeoR C terminal sensor domain EML4058_22735 PF13407 Periplasmic binding protein domain EML4058_22740 PF00005 ABC transporter EML4058_22745 PF02653 Branched-chain amino acid transport system / permease component EML4058_22750 PF02653 Branched-chain amino acid transport system / permease component EML4058_22760 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EML4058_22760 PF00294 pfkB family carbohydrate kinase EML4058_22765 PF01791 DeoC/LacD family aldolase EML4058_22770 PF00171 Aldehyde dehydrogenase family EML4058_22795 PF01443 Viral (Superfamily 1) RNA helicase EML4058_22795 PF17841 BID domain of Bartonella effector protein (Bep) EML4058_22795 PF03389 MobA/MobL family EML4058_22810 PF02534 Type IV secretory system Conjugative DNA transfer EML4058_22830 PF01695 IstB-like ATP binding protein EML4058_22845 PF01047 MarR family EML4058_22865 PF00248 Aldo/keto reductase family EML4058_22875 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_22875 PF00107 Zinc-binding dehydrogenase EML4058_22880 PF03466 LysR substrate binding domain EML4058_22880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_22885 PF00440 Bacterial regulatory proteins, tetR family EML4058_22900 PF00248 Aldo/keto reductase family EML4058_22920 PF12833 Helix-turn-helix domain EML4058_22920 PF07883 Cupin domain EML4058_22980 PF00665 Integrase core domain EML4058_22985 PF13302 Acetyltransferase (GNAT) domain EML4058_23000 PF00376 MerR family regulatory protein EML4058_23000 PF13614 AAA domain EML4058_23005 PF07506 RepB plasmid partitioning protein EML4058_23005 PF02195 ParB-like nuclease domain EML4058_23010 PF11800 Replication protein C C-terminal region EML4058_23010 PF03428 Replication protein C N-terminal domain EML4058_23020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_23020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_23025 PF00005 ABC transporter EML4058_23030 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_23035 PF00356 Bacterial regulatory proteins, lacI family EML4058_23080 PF07756 Protein of unknown function (DUF1612) EML4058_23080 PF11972 HTH DNA binding domain EML4058_23115 PF02463 RecF/RecN/SMC N terminal domain EML4058_23120 PF00570 HRDC domain EML4058_23120 PF13361 UvrD-like helicase C-terminal domain EML4058_23180 PF02661 Fic/DOC family EML4058_23180 PF13784 Fic/DOC family N-terminal EML4058_23190 PF17762 HTH domain found in ParB protein EML4058_23190 PF02195 ParB-like nuclease domain EML4058_23240 PF02735 Ku70/Ku80 beta-barrel domain EML4058_23245 PF02735 Ku70/Ku80 beta-barrel domain EML4058_23250 PF13298 DNA polymerase Ligase (LigD) EML4058_23250 PF01068 ATP dependent DNA ligase domain EML4058_23250 PF04679 ATP dependent DNA ligase C terminal region EML4058_23255 PF00011 Hsp20/alpha crystallin family EML4058_23270 PF01068 ATP dependent DNA ligase domain EML4058_23270 PF13298 DNA polymerase Ligase (LigD) EML4058_23270 PF04679 ATP dependent DNA ligase C terminal region EML4058_23285 PF13416 Bacterial extracellular solute-binding protein EML4058_23290 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_23295 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_23305 PF00005 ABC transporter EML4058_23305 PF08402 TOBE domain EML4058_23310 PF01418 Helix-turn-helix domain, rpiR family EML4058_23310 PF01380 SIS domain EML4058_23315 PF01047 MarR family EML4058_23320 PF00561 alpha/beta hydrolase fold EML4058_23330 PF00701 Dihydrodipicolinate synthetase family EML4058_23335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_23335 PF00005 ABC transporter EML4058_23340 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_23340 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_23345 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_23350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_23360 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EML4058_23365 PF00465 Iron-containing alcohol dehydrogenase EML4058_23370 PF07729 FCD domain EML4058_23370 PF00392 Bacterial regulatory proteins, gntR family EML4058_23375 PF07005 Sugar-binding N-terminal domain EML4058_23375 PF17042 Nucleotide-binding C-terminal domain EML4058_23385 PF00356 Bacterial regulatory proteins, lacI family EML4058_23395 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_23400 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_23410 PF00005 ABC transporter EML4058_23410 PF17912 MalK OB fold domain EML4058_23415 PF03466 LysR substrate binding domain EML4058_23415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_23425 PF06745 KaiC EML4058_23430 PF07536 HWE histidine kinase EML4058_23430 PF13426 PAS domain EML4058_23430 PF13581 Histidine kinase-like ATPase domain EML4058_23440 PF07238 PilZ domain EML4058_23440 PF03552 Cellulose synthase EML4058_23440 PF00535 Glycosyl transferase family 2 EML4058_23470 PF04679 ATP dependent DNA ligase C terminal region EML4058_23470 PF01068 ATP dependent DNA ligase domain EML4058_23470 PF13298 DNA polymerase Ligase (LigD) EML4058_23485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EML4058_23485 PF07733 Bacterial DNA polymerase III alpha NTPase domain EML4058_23485 PF14579 Helix-hairpin-helix motif EML4058_23485 PF02811 PHP domain EML4058_23505 PF05284 Protein of unknown function (DUF736) EML4058_23520 PF05406 WGR domain EML4058_23525 PF02534 Type IV secretory system Conjugative DNA transfer EML4058_23540 PF17841 BID domain of Bartonella effector protein (Bep) EML4058_23540 PF03389 MobA/MobL family EML4058_23540 PF01443 Viral (Superfamily 1) RNA helicase EML4058_23575 PF00155 Aminotransferase class I and II EML4058_23580 PF00486 Transcriptional regulatory protein, C terminal EML4058_23580 PF00072 Response regulator receiver domain EML4058_23590 PF00486 Transcriptional regulatory protein, C terminal EML4058_23590 PF00072 Response regulator receiver domain EML4058_23600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EML4058_23600 PF00205 Thiamine pyrophosphate enzyme, central domain EML4058_23600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EML4058_23605 PF00202 Aminotransferase class-III EML4058_23615 PF00005 ABC transporter EML4058_23615 PF08402 TOBE domain EML4058_23620 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_23625 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_23635 PF00005 ABC transporter EML4058_23650 PF09339 IclR helix-turn-helix domain EML4058_23650 PF01614 Bacterial transcriptional regulator EML4058_23655 PF00171 Aldehyde dehydrogenase family EML4058_23660 PF00465 Iron-containing alcohol dehydrogenase EML4058_23665 PF00753 Metallo-beta-lactamase superfamily EML4058_23695 PF02308 MgtC family EML4058_23710 PF02798 Glutathione S-transferase, N-terminal domain EML4058_23710 PF00043 Glutathione S-transferase, C-terminal domain EML4058_23715 PF01638 HxlR-like helix-turn-helix EML4058_23755 PF04956 TrbC/VIRB2 family EML4058_23760 PF05101 Type IV secretory pathway, VirB3-like protein EML4058_23765 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EML4058_23770 PF07996 Type IV secretion system proteins EML4058_23780 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EML4058_23790 PF04335 VirB8 protein EML4058_23795 PF03524 Conjugal transfer protein EML4058_23800 PF03743 Bacterial conjugation TrbI-like protein EML4058_23805 PF00437 Type II/IV secretion system protein EML4058_23820 PF00072 Response regulator receiver domain EML4058_23820 PF00486 Transcriptional regulatory protein, C terminal EML4058_23825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_23825 PF00512 His Kinase A (phospho-acceptor) domain EML4058_23825 PF00989 PAS fold EML4058_23825 PF11808 Phosphate regulon sensor protein PhoR EML4058_23830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EML4058_23835 PF02687 FtsX-like permease family EML4058_23835 PF12704 MacB-like periplasmic core domain EML4058_23835 PF00005 ABC transporter EML4058_23850 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_23850 PF00107 Zinc-binding dehydrogenase EML4058_23860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_23860 PF03466 LysR substrate binding domain EML4058_23870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_23870 PF03466 LysR substrate binding domain EML4058_23875 PF00107 Zinc-binding dehydrogenase EML4058_23875 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_23885 PF00561 alpha/beta hydrolase fold EML4058_23890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_23890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_23895 PF00326 Prolyl oligopeptidase family EML4058_23900 PF13411 MerR HTH family regulatory protein EML4058_23900 PF07739 TipAS antibiotic-recognition domain EML4058_23905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_23905 PF03466 LysR substrate binding domain EML4058_23910 PF17969 L,D-transpeptidase C-terminal domain EML4058_23910 PF03734 L,D-transpeptidase catalytic domain EML4058_23915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_23915 PF03466 LysR substrate binding domain EML4058_23920 PF00248 Aldo/keto reductase family EML4058_23925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_23925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_23935 PF02678 Pirin EML4058_23935 PF05726 Pirin C-terminal cupin domain EML4058_23940 PF00107 Zinc-binding dehydrogenase EML4058_23940 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_23950 PF00171 Aldehyde dehydrogenase family EML4058_23960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_23960 PF03466 LysR substrate binding domain EML4058_23970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_23970 PF03466 LysR substrate binding domain EML4058_23985 PF01047 MarR family EML4058_24005 PF03466 LysR substrate binding domain EML4058_24005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_24010 PF00571 CBS domain EML4058_24010 PF00005 ABC transporter EML4058_24015 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24020 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EML4058_24025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_24045 PF00561 alpha/beta hydrolase fold EML4058_24050 PF00296 Luciferase-like monooxygenase EML4058_24055 PF00171 Aldehyde dehydrogenase family EML4058_24060 PF01613 Flavin reductase like domain EML4058_24075 PF01042 Endoribonuclease L-PSP EML4058_24085 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24090 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24095 PF00005 ABC transporter EML4058_24100 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_24105 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EML4058_24110 PF00356 Bacterial regulatory proteins, lacI family EML4058_24115 PF00107 Zinc-binding dehydrogenase EML4058_24115 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_24120 PF03466 LysR substrate binding domain EML4058_24120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_24125 PF03576 Peptidase family S58 EML4058_24130 PF00455 DeoR C terminal sensor domain EML4058_24130 PF08220 DeoR-like helix-turn-helix domain EML4058_24135 PF00857 Isochorismatase family EML4058_24140 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24145 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24150 PF08402 TOBE domain EML4058_24150 PF00005 ABC transporter EML4058_24165 PF00202 Aminotransferase class-III EML4058_24175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_24180 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24185 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24185 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_24190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_24190 PF00005 ABC transporter EML4058_24195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_24195 PF00005 ABC transporter EML4058_24205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_24205 PF03466 LysR substrate binding domain EML4058_24210 PF00144 Beta-lactamase EML4058_24215 PF07519 Tannase and feruloyl esterase EML4058_24220 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24225 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24235 PF07730 Histidine kinase EML4058_24235 PF17200 Single Cache domain 2 EML4058_24240 PF00196 Bacterial regulatory proteins, luxR family EML4058_24240 PF00072 Response regulator receiver domain EML4058_24245 PF03480 Bacterial extracellular solute-binding protein, family 7 EML4058_24250 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EML4058_24260 PF08279 HTH domain EML4058_24260 PF13280 WYL domain EML4058_24265 PF13417 Glutathione S-transferase, N-terminal domain EML4058_24265 PF00043 Glutathione S-transferase, C-terminal domain EML4058_24270 PF01047 MarR family EML4058_24295 PF05974 Domain of unknown function (DUF892) EML4058_24325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EML4058_24325 PF11941 Domain of unknown function (DUF3459) EML4058_24325 PF00128 Alpha amylase, catalytic domain EML4058_24330 PF08323 Starch synthase catalytic domain EML4058_24330 PF00534 Glycosyl transferases group 1 EML4058_24345 PF00440 Bacterial regulatory proteins, tetR family EML4058_24345 PF18665 Tetracyclin repressor-like, C-terminal domain EML4058_24350 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EML4058_24350 PF01488 Shikimate / quinate 5-dehydrogenase EML4058_24350 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EML4058_24355 PF00440 Bacterial regulatory proteins, tetR family EML4058_24355 PF08360 QacR-like protein, C-terminal region EML4058_24375 PF00561 alpha/beta hydrolase fold EML4058_24380 PF00561 alpha/beta hydrolase fold EML4058_24405 PF00202 Aminotransferase class-III EML4058_24410 PF03466 LysR substrate binding domain EML4058_24410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_24420 PF00285 Citrate synthase, C-terminal domain EML4058_24425 PF00285 Citrate synthase, C-terminal domain EML4058_24445 PF07715 TonB-dependent Receptor Plug Domain EML4058_24445 PF00593 TonB dependent receptor EML4058_24450 PF01497 Periplasmic binding protein EML4058_24460 PF01032 FecCD transport family EML4058_24465 PF01032 FecCD transport family EML4058_24470 PF00005 ABC transporter EML4058_24490 PF03358 NADPH-dependent FMN reductase EML4058_24500 PF00107 Zinc-binding dehydrogenase EML4058_24500 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_24505 PF03466 LysR substrate binding domain EML4058_24505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_24510 PF03466 LysR substrate binding domain EML4058_24510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_24515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EML4058_24515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_24515 PF01842 ACT domain EML4058_24520 PF03737 Aldolase/RraA EML4058_24535 PF01970 Tripartite tricarboxylate transporter TctA family EML4058_24540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_24540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EML4058_24545 PF13660 Domain of unknown function (DUF4147) EML4058_24545 PF05161 MOFRL family EML4058_24550 PF01070 FMN-dependent dehydrogenase EML4058_24570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_24570 PF03466 LysR substrate binding domain EML4058_24580 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24585 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24590 PF00005 ABC transporter EML4058_24590 PF08402 TOBE domain EML4058_24595 PF13454 FAD-NAD(P)-binding EML4058_24600 PF01323 DSBA-like thioredoxin domain EML4058_24615 PF01554 MatE EML4058_24635 PF00356 Bacterial regulatory proteins, lacI family EML4058_24635 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EML4058_24640 PF01261 Xylose isomerase-like TIM barrel EML4058_24645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EML4058_24645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EML4058_24650 PF01261 Xylose isomerase-like TIM barrel EML4058_24655 PF01638 HxlR-like helix-turn-helix EML4058_24680 PF00672 HAMP domain EML4058_24680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_24690 PF00106 short chain dehydrogenase EML4058_24695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EML4058_24700 PF00561 alpha/beta hydrolase fold EML4058_24705 PF08240 Alcohol dehydrogenase GroES-like domain EML4058_24705 PF00107 Zinc-binding dehydrogenase EML4058_24710 PF05406 WGR domain EML4058_24715 PF00011 Hsp20/alpha crystallin family EML4058_24725 PF00005 ABC transporter EML4058_24730 PF12704 MacB-like periplasmic core domain EML4058_24730 PF02687 FtsX-like permease family EML4058_24745 PF05035 2-keto-3-deoxy-galactonokinase EML4058_24750 PF00701 Dihydrodipicolinate synthetase family EML4058_24755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EML4058_24755 PF13378 Enolase C-terminal domain-like EML4058_24765 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24770 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24775 PF17912 MalK OB fold domain EML4058_24775 PF00005 ABC transporter EML4058_24780 PF16363 GDP-mannose 4,6 dehydratase EML4058_24785 PF01614 Bacterial transcriptional regulator EML4058_24785 PF09339 IclR helix-turn-helix domain EML4058_24795 PF02705 K+ potassium transporter EML4058_24805 PF11799 impB/mucB/samB family C-terminal domain EML4058_24805 PF00817 impB/mucB/samB family EML4058_24820 PF01063 Amino-transferase class IV EML4058_24825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EML4058_24835 PF06418 CTP synthase N-terminus EML4058_24835 PF00117 Glutamine amidotransferase class-I EML4058_24840 PF01321 Creatinase/Prolidase N-terminal domain EML4058_24840 PF00557 Metallopeptidase family M24 EML4058_24845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EML4058_24845 PF13378 Enolase C-terminal domain-like EML4058_24850 PF07687 Peptidase dimerisation domain EML4058_24850 PF01546 Peptidase family M20/M25/M40 EML4058_24855 PF00005 ABC transporter EML4058_24860 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_24865 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_24870 PF07729 FCD domain EML4058_24870 PF00392 Bacterial regulatory proteins, gntR family EML4058_24900 PF04542 Sigma-70 region 2 EML4058_24900 PF08281 Sigma-70, region 4 EML4058_24910 PF06628 Catalase-related immune-responsive EML4058_24910 PF18011 C-terminal domain found in long catalases EML4058_24910 PF00199 Catalase EML4058_24925 PF05974 Domain of unknown function (DUF892) EML4058_24930 PF00561 alpha/beta hydrolase fold EML4058_24935 PF17925 Tetracyclin repressor-like, C-terminal domain EML4058_24935 PF00440 Bacterial regulatory proteins, tetR family EML4058_24940 PF13478 XdhC Rossmann domain EML4058_24940 PF02625 XdhC and CoxI family EML4058_24945 PF00111 2Fe-2S iron-sulfur cluster binding domain EML4058_24945 PF01799 [2Fe-2S] binding domain EML4058_24950 PF00941 FAD binding domain in molybdopterin dehydrogenase EML4058_24950 PF03450 CO dehydrogenase flavoprotein C-terminal domain EML4058_24955 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EML4058_24955 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EML4058_24960 PF00132 Bacterial transferase hexapeptide (six repeats) EML4058_24960 PF12804 MobA-like NTP transferase domain EML4058_24980 PF00072 Response regulator receiver domain EML4058_24980 PF00486 Transcriptional regulatory protein, C terminal EML4058_24985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_25000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_25000 PF13426 PAS domain EML4058_25000 PF00072 Response regulator receiver domain EML4058_25005 PF06745 KaiC EML4058_25020 PF00313 'Cold-shock' DNA-binding domain EML4058_25025 PF00226 DnaJ domain EML4058_25030 PF07478 D-ala D-ala ligase C-terminus EML4058_25030 PF01820 D-ala D-ala ligase N-terminus EML4058_25045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EML4058_25045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EML4058_25050 PF00005 ABC transporter EML4058_25060 PF02653 Branched-chain amino acid transport system / permease component EML4058_25070 PF12399 Branched-chain amino acid ATP-binding cassette transporter EML4058_25070 PF00005 ABC transporter EML4058_25075 PF00296 Luciferase-like monooxygenase EML4058_25080 PF03358 NADPH-dependent FMN reductase EML4058_25085 PF07536 HWE histidine kinase EML4058_25085 PF13581 Histidine kinase-like ATPase domain EML4058_25085 PF13426 PAS domain EML4058_25100 PF13458 Periplasmic binding protein EML4058_25105 PF02653 Branched-chain amino acid transport system / permease component EML4058_25115 PF12399 Branched-chain amino acid ATP-binding cassette transporter EML4058_25115 PF00005 ABC transporter EML4058_25120 PF09383 NIL domain EML4058_25120 PF00005 ABC transporter EML4058_25125 PF00795 Carbon-nitrogen hydrolase EML4058_25135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EML4058_25135 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_25145 PF13533 Biotin-lipoyl like EML4058_25155 PF04632 Fusaric acid resistance protein family EML4058_25165 PF02311 AraC-like ligand binding domain EML4058_25165 PF12833 Helix-turn-helix domain EML4058_25175 PF03466 LysR substrate binding domain EML4058_25175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_25180 PF00753 Metallo-beta-lactamase superfamily EML4058_25190 PF13614 AAA domain EML4058_25195 PF07506 RepB plasmid partitioning protein EML4058_25195 PF02195 ParB-like nuclease domain EML4058_25200 PF11800 Replication protein C C-terminal region EML4058_25200 PF03428 Replication protein C N-terminal domain EML4058_25210 PF00990 Diguanylate cyclase, GGDEF domain EML4058_25210 PF03707 Bacterial signalling protein N terminal repeat EML4058_25210 PF00563 EAL domain EML4058_25210 PF13188 PAS domain EML4058_25215 PF00589 Phage integrase family EML4058_25340 PF00067 Cytochrome P450 EML4058_25345 PF00067 Cytochrome P450 EML4058_25350 PF06903 VirK protein EML4058_25355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EML4058_25355 PF00512 His Kinase A (phospho-acceptor) domain EML4058_25370 PF01464 Transglycosylase SLT domain EML4058_25375 PF04956 TrbC/VIRB2 family EML4058_25380 PF05101 Type IV secretory pathway, VirB3-like protein EML4058_25385 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EML4058_25395 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EML4058_25400 PF17413 Outer membrane lipoprotein virB7 EML4058_25405 PF04335 VirB8 protein EML4058_25410 PF03524 Conjugal transfer protein EML4058_25415 PF03743 Bacterial conjugation TrbI-like protein EML4058_25420 PF00437 Type II/IV secretion system protein EML4058_25425 PF00072 Response regulator receiver domain EML4058_25425 PF00486 Transcriptional regulatory protein, C terminal EML4058_25440 PF13005 zinc-finger binding domain of transposase IS66 EML4058_25440 PF13817 IS66 C-terminal element EML4058_25440 PF03050 Transposase IS66 family EML4058_25440 PF13007 Transposase C of IS166 homeodomain EML4058_25445 PF05717 IS66 Orf2 like protein EML4058_25450 PF01527 Transposase EML4058_25460 PF05717 IS66 Orf2 like protein EML4058_25470 PF07181 VirC2 protein EML4058_25475 PF07015 VirC1 protein EML4058_25480 PF07328 T-DNA border endonuclease VirD1 EML4058_25485 PF03432 Relaxase/Mobilisation nuclease domain EML4058_25490 PF02534 Type IV secretory system Conjugative DNA transfer EML4058_25500 PF12189 Single-strand DNA-binding protein EML4058_25505 PF07229 VirE2 EML4058_25520 PF00216 Bacterial DNA-binding protein EML4058_25530 PF00313 'Cold-shock' DNA-binding domain EML4058_25550 PF10502 Signal peptidase, peptidase S26 EML4058_25565 PF13419 Haloacid dehalogenase-like hydrolase EML4058_25570 PF01980 tRNA-methyltransferase O EML4058_25615 PF01815 Rop protein EML4058_25640 PF00216 Bacterial DNA-binding protein EML4058_25655 PF02534 Type IV secretory system Conjugative DNA transfer EML4058_25660 PF06412 Conjugal transfer protein TraD EML4058_25665 PF07820 TraC-like protein EML4058_25670 PF17841 BID domain of Bartonella effector protein (Bep) EML4058_25670 PF01443 Viral (Superfamily 1) RNA helicase EML4058_25670 PF03389 MobA/MobL family EML4058_25675 PF10502 Signal peptidase, peptidase S26 EML4058_25680 PF00795 Carbon-nitrogen hydrolase EML4058_25685 PF06871 TraH_2 EML4058_25700 PF09228 Prokaryotic Transcriptional repressor TraM EML4058_25705 PF00196 Bacterial regulatory proteins, luxR family EML4058_25705 PF03472 Autoinducer binding domain EML4058_25710 PF00005 ABC transporter EML4058_25710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_25715 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_25715 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_25720 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_25725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_25735 PF02423 Ornithine cyclodeaminase/mu-crystallin family EML4058_25745 PF04324 BFD-like [2Fe-2S] binding domain EML4058_25745 PF07992 Pyridine nucleotide-disulphide oxidoreductase EML4058_25755 PF01266 FAD dependent oxidoreductase EML4058_25760 PF00497 Bacterial extracellular solute-binding proteins, family 3 EML4058_25765 PF00005 ABC transporter EML4058_25770 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_25775 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_25780 PF03466 LysR substrate binding domain EML4058_25780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EML4058_25795 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_25800 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_25805 PF00005 ABC transporter EML4058_25805 PF08402 TOBE domain EML4058_25815 PF00672 HAMP domain EML4058_25815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EML4058_25830 PF08402 TOBE domain EML4058_25830 PF00005 ABC transporter EML4058_25835 PF01321 Creatinase/Prolidase N-terminal domain EML4058_25835 PF00557 Metallopeptidase family M24 EML4058_25840 PF00294 pfkB family carbohydrate kinase EML4058_25855 PF00106 short chain dehydrogenase EML4058_25860 PF00920 Dehydratase family EML4058_25865 PF00248 Aldo/keto reductase family EML4058_25880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EML4058_25885 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_25885 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_25890 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_25895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_25895 PF00005 ABC transporter EML4058_25905 PF01266 FAD dependent oxidoreductase EML4058_25910 PF01968 Hydantoinase/oxoprolinase EML4058_25910 PF05378 Hydantoinase/oxoprolinase N-terminal region EML4058_25925 PF00455 DeoR C terminal sensor domain EML4058_25925 PF08220 DeoR-like helix-turn-helix domain EML4058_25935 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_25940 PF00528 Binding-protein-dependent transport system inner membrane component EML4058_25940 PF12911 N-terminal TM domain of oligopeptide transport permease C EML4058_25945 PF00005 ABC transporter EML4058_25945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EML4058_25955 PF03743 Bacterial conjugation TrbI-like protein EML4058_25965 PF03524 Conjugal transfer protein EML4058_25970 PF04335 VirB8 protein EML4058_25975 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EML4058_25980 PF10907 Protein of unknown function (DUF2749) EML4058_25990 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EML4058_25995 PF05101 Type IV secretory pathway, VirB3-like protein EML4058_26000 PF04956 TrbC/VIRB2 family EML4058_26005 PF00437 Type II/IV secretion system protein EML4058_26010 PF00765 Autoinducer synthase EML4058_26015 PF00486 Transcriptional regulatory protein, C terminal EML4058_26015 PF00072 Response regulator receiver domain EML4058_26030 PF12189 Single-strand DNA-binding protein EML4058_26035 PF07229 VirE2 EML4058_26045 PF07690 Major Facilitator Superfamily EML4058_26060 PF01815 Rop protein EML4058_26085 PF11740 Plasmid replication region DNA-binding N-term EML4058_26090 PF00565 Staphylococcal nuclease homologue EML4058_26110 PF00893 Small Multidrug Resistance protein EML4058_26115 PF13427 Domain of unknown function (DUF4111)