locus-tag class description FY134_00005 PF00308 Bacterial dnaA protein FY134_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY134_00005 PF11638 DnaA N-terminal domain FY134_00010 PF06969 HemN C-terminal domain FY134_00010 PF04055 Radical SAM superfamily FY134_00015 PF01725 Ham1 family FY134_00020 PF01138 3' exoribonuclease family, domain 1 FY134_00020 PF03725 3' exoribonuclease family, domain 2 FY134_00025 PF01628 HrcA protein C terminal domain FY134_00030 PF01025 GrpE FY134_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY134_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY134_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY134_00045 PF04552 Sigma-54, DNA binding domain FY134_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY134_00045 PF04963 Sigma-54 factor, core binding domain FY134_00050 PF00005 ABC transporter FY134_00055 PF03968 OstA-like protein FY134_00065 PF01343 Peptidase family S49 FY134_00070 PF00216 Bacterial DNA-binding protein FY134_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY134_00080 PF02926 THUMP domain FY134_00080 PF01170 Putative RNA methylase family UPF0020 FY134_00085 PF00588 SpoU rRNA Methylase family FY134_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY134_00090 PF01252 Signal peptidase (SPase) II FY134_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY134_00095 PF01627 Hpt domain FY134_00095 PF00072 Response regulator receiver domain FY134_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_00095 PF00672 HAMP domain FY134_00095 PF00512 His Kinase A (phospho-acceptor) domain FY134_00105 PF01624 MutS domain I FY134_00105 PF05188 MutS domain II FY134_00105 PF05192 MutS domain III FY134_00105 PF05190 MutS family domain IV FY134_00105 PF00488 MutS domain V FY134_00110 PF08335 GlnD PII-uridylyltransferase FY134_00110 PF01966 HD domain FY134_00110 PF01909 Nucleotidyltransferase domain FY134_00110 PF01842 ACT domain FY134_00115 PF03023 Lipid II flippase MurJ FY134_00125 PF00579 tRNA synthetases class I (W and Y) FY134_00135 PF01106 NifU-like domain FY134_00140 PF00814 Glycoprotease family FY134_00145 PF13508 Acetyltransferase (GNAT) domain FY134_00145 PF00583 Acetyltransferase (GNAT) family FY134_00150 PF01475 Ferric uptake regulator family FY134_00155 PF01553 Acyltransferase FY134_00160 PF04055 Radical SAM superfamily FY134_00160 PF01938 TRAM domain FY134_00160 PF00919 Uncharacterized protein family UPF0004 FY134_00165 PF02562 PhoH-like protein FY134_00170 PF02130 Uncharacterized protein family UPF0054 FY134_00175 PF00571 CBS domain FY134_00175 PF03471 Transporter associated domain FY134_00180 PF00795 Carbon-nitrogen hydrolase FY134_00185 PF01381 Helix-turn-helix FY134_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY134_00190 PF02772 S-adenosylmethionine synthetase, central domain FY134_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY134_00195 PF02390 Putative methyltransferase FY134_00200 PF00294 pfkB family carbohydrate kinase FY134_00205 PF02646 RmuC family FY134_00210 PF01327 Polypeptide deformylase FY134_00215 PF02911 Formyl transferase, C-terminal domain FY134_00215 PF00551 Formyl transferase FY134_00220 PF01416 tRNA pseudouridine synthase FY134_00230 PF07687 Peptidase dimerisation domain FY134_00230 PF01546 Peptidase family M20/M25/M40 FY134_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY134_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY134_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY134_00245 PF00672 HAMP domain FY134_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY134_00255 PF00011 Hsp20/alpha crystallin family FY134_00280 PF00696 Amino acid kinase family FY134_00290 PF01926 50S ribosome-binding GTPase FY134_00295 PF14849 YidC periplasmic domain FY134_00295 PF02096 60Kd inner membrane protein FY134_00300 PF00825 Ribonuclease P FY134_00305 PF00468 Ribosomal protein L34 FY134_00310 PF00672 HAMP domain FY134_00310 PF02203 Tar ligand binding domain homologue FY134_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_00315 PF00512 His Kinase A (phospho-acceptor) domain FY134_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_00325 PF01209 ubiE/COQ5 methyltransferase family FY134_00330 PF00005 ABC transporter FY134_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY134_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY134_00350 PF00149 Calcineurin-like phosphoesterase FY134_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY134_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY134_00365 PF05544 Proline racemase FY134_00370 PF01979 Amidohydrolase family FY134_00375 PF00156 Phosphoribosyl transferase domain FY134_00380 PF00294 pfkB family carbohydrate kinase FY134_00395 PF00342 Phosphoglucose isomerase FY134_00400 PF13193 AMP-binding enzyme C-terminal domain FY134_00400 PF00501 AMP-binding enzyme FY134_00405 PF00005 ABC transporter FY134_00405 PF08402 TOBE domain FY134_00415 PF00528 Binding-protein-dependent transport system inner membrane component FY134_00420 PF07715 TonB-dependent Receptor Plug Domain FY134_00420 PF00593 TonB dependent receptor FY134_00445 PF01679 Proteolipid membrane potential modulator FY134_00465 PF03976 Polyphosphate kinase 2 (PPK2) FY134_00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_00470 PF16736 Single Cache-like FY134_00470 PF00989 PAS fold FY134_00470 PF00512 His Kinase A (phospho-acceptor) domain FY134_00475 PF12849 PBP superfamily domain FY134_00480 PF00528 Binding-protein-dependent transport system inner membrane component FY134_00485 PF00528 Binding-protein-dependent transport system inner membrane component FY134_00490 PF00005 ABC transporter FY134_00495 PF01895 PhoU domain FY134_00500 PF00486 Transcriptional regulatory protein, C terminal FY134_00500 PF00072 Response regulator receiver domain FY134_00510 PF00202 Aminotransferase class-III FY134_00515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY134_00515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY134_00520 PF01430 Hsp33 protein FY134_00525 PF04379 ApaG domain FY134_00530 PF01053 Cys/Met metabolism PLP-dependent enzyme FY134_00540 PF00692 dUTPase FY134_00550 PF02469 Fasciclin domain FY134_00570 PF00230 Major intrinsic protein FY134_00610 PF00196 Bacterial regulatory proteins, luxR family FY134_00610 PF00072 Response regulator receiver domain FY134_00620 PF01180 Dihydroorotate dehydrogenase FY134_00635 PF08241 Methyltransferase domain FY134_00655 PF02082 Transcriptional regulator FY134_00660 PF00270 DEAD/DEAH box helicase FY134_00660 PF08494 DEAD/H associated FY134_00660 PF00271 Helicase conserved C-terminal domain FY134_00680 PF01925 Sulfite exporter TauE/SafE FY134_00690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY134_00690 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY134_00690 PF02770 Acyl-CoA dehydrogenase, middle domain FY134_00690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY134_00695 PF02803 Thiolase, C-terminal domain FY134_00695 PF00108 Thiolase, N-terminal domain FY134_00700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY134_00700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY134_00700 PF00378 Enoyl-CoA hydratase/isomerase FY134_00720 PF03334 Na+/H+ antiporter subunit FY134_00725 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY134_00730 PF01899 Na+/H+ ion antiporter subunit FY134_00735 PF00361 Proton-conducting membrane transporter FY134_00740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY134_00745 PF13244 Domain of unknown function (DUF4040) FY134_00745 PF00361 Proton-conducting membrane transporter FY134_00745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY134_00745 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY134_00755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_00765 PF00072 Response regulator receiver domain FY134_00770 PF01584 CheW-like domain FY134_00770 PF01627 Hpt domain FY134_00770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_00770 PF02895 Signal transducing histidine kinase, homodimeric domain FY134_00775 PF01739 CheR methyltransferase, SAM binding domain FY134_00775 PF03705 CheR methyltransferase, all-alpha domain FY134_00780 PF01339 CheB methylesterase FY134_00780 PF00072 Response regulator receiver domain FY134_00785 PF00072 Response regulator receiver domain FY134_00790 PF03975 CheD chemotactic sensory transduction FY134_00800 PF01514 Secretory protein of YscJ/FliF family FY134_00800 PF08345 Flagellar M-ring protein C-terminal FY134_00805 PF00196 Bacterial regulatory proteins, luxR family FY134_00805 PF03472 Autoinducer binding domain FY134_00815 PF00672 HAMP domain FY134_00815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_00820 PF00672 HAMP domain FY134_00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_00820 PF00512 His Kinase A (phospho-acceptor) domain FY134_00820 PF01627 Hpt domain FY134_00820 PF00072 Response regulator receiver domain FY134_00830 PF01741 Large-conductance mechanosensitive channel, MscL FY134_00835 PF00155 Aminotransferase class I and II FY134_00840 PF01370 NAD dependent epimerase/dehydratase family FY134_00850 PF03884 DNA gyrase inhibitor YacG FY134_00855 PF02545 Maf-like protein FY134_00860 PF01176 Translation initiation factor 1A / IF-1 FY134_00870 PF06793 Uncharacterised protein family (UPF0262) FY134_00875 PF00815 Histidinol dehydrogenase FY134_00885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY134_00900 PF00700 Bacterial flagellin C-terminal helical region FY134_00900 PF00669 Bacterial flagellin N-terminal helical region FY134_00905 PF00669 Bacterial flagellin N-terminal helical region FY134_00905 PF00700 Bacterial flagellin C-terminal helical region FY134_00915 PF00669 Bacterial flagellin N-terminal helical region FY134_00915 PF00700 Bacterial flagellin C-terminal helical region FY134_00920 PF00813 FliP family FY134_00930 PF02107 Flagellar L-ring protein FY134_00940 PF02119 Flagellar P-ring protein FY134_00945 PF13144 Chaperone for flagella basal body P-ring formation FY134_00950 PF00460 Flagella basal body rod protein FY134_00950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY134_00955 PF02049 Flagellar hook-basal body complex protein FliE FY134_00960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY134_00965 PF00460 Flagella basal body rod protein FY134_00970 PF01810 LysE type translocator FY134_00980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY134_00980 PF18269 T3SS EscN ATPase C-terminal domain FY134_00985 PF00460 Flagella basal body rod protein FY134_00985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY134_00995 PF01618 MotA/TolQ/ExbB proton channel family FY134_01000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY134_01005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY134_01010 PF14842 FliG N-terminal domain FY134_01010 PF01706 FliG C-terminal domain FY134_01010 PF14841 FliG middle domain FY134_01015 PF01312 FlhB HrpN YscU SpaS Family FY134_01025 PF00669 Bacterial flagellin N-terminal helical region FY134_01025 PF00700 Bacterial flagellin C-terminal helical region FY134_01035 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY134_01035 PF00691 OmpA family FY134_01045 PF02120 Flagellar hook-length control protein FliK FY134_01055 PF00486 Transcriptional regulatory protein, C terminal FY134_01060 PF07559 Flagellar basal body protein FlaE FY134_01060 PF00460 Flagella basal body rod protein FY134_01060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY134_01080 PF07378 Flagellar protein FlbT FY134_01085 PF03963 Flagellar hook capping protein - N-terminal region FY134_01090 PF01313 Bacterial export proteins, family 3 FY134_01095 PF00771 FHIPEP family FY134_01100 PF01311 Bacterial export proteins, family 1 FY134_01135 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY134_01135 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY134_01140 PF00356 Bacterial regulatory proteins, lacI family FY134_01145 PF01547 Bacterial extracellular solute-binding protein FY134_01150 PF00528 Binding-protein-dependent transport system inner membrane component FY134_01155 PF00528 Binding-protein-dependent transport system inner membrane component FY134_01160 PF00128 Alpha amylase, catalytic domain FY134_01165 PF00005 ABC transporter FY134_01165 PF17912 MalK OB fold domain FY134_01165 PF03459 TOBE domain FY134_01175 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY134_01190 PF00920 Dehydratase family FY134_01195 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY134_01200 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY134_01200 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY134_01205 PF01266 FAD dependent oxidoreductase FY134_01210 PF00120 Glutamine synthetase, catalytic domain FY134_01235 PF00463 Isocitrate lyase family FY134_01240 PF01381 Helix-turn-helix FY134_01240 PF06114 IrrE N-terminal-like domain FY134_01240 PF09856 Predicted transcriptional regulator (DUF2083) FY134_01245 PF13416 Bacterial extracellular solute-binding protein FY134_01250 PF00005 ABC transporter FY134_01250 PF08402 TOBE domain FY134_01255 PF00528 Binding-protein-dependent transport system inner membrane component FY134_01260 PF00528 Binding-protein-dependent transport system inner membrane component FY134_01270 PF00512 His Kinase A (phospho-acceptor) domain FY134_01270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_01270 PF13426 PAS domain FY134_01270 PF13188 PAS domain FY134_01270 PF00989 PAS fold FY134_01280 PF02541 Ppx/GppA phosphatase family FY134_01285 PF01728 FtsJ-like methyltransferase FY134_01290 PF07690 Major Facilitator Superfamily FY134_01295 PF00753 Metallo-beta-lactamase superfamily FY134_01300 PF00571 CBS domain FY134_01300 PF00478 IMP dehydrogenase / GMP reductase domain FY134_01310 PF08240 Alcohol dehydrogenase GroES-like domain FY134_01310 PF00107 Zinc-binding dehydrogenase FY134_01315 PF01738 Dienelactone hydrolase family FY134_01320 PF00512 His Kinase A (phospho-acceptor) domain FY134_01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_01320 PF00672 HAMP domain FY134_01325 PF00072 Response regulator receiver domain FY134_01325 PF00486 Transcriptional regulatory protein, C terminal FY134_01335 PF00994 Probable molybdopterin binding domain FY134_01340 PF00288 GHMP kinases N terminal domain FY134_01340 PF08544 GHMP kinases C terminal FY134_01350 PF00348 Polyprenyl synthetase FY134_01365 PF06965 Na+/H+ antiporter 1 FY134_01365 PF01343 Peptidase family S49 FY134_01375 PF02091 Glycyl-tRNA synthetase alpha subunit FY134_01385 PF04011 LemA family FY134_01390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY134_01400 PF05746 DALR anticodon binding domain FY134_01400 PF02092 Glycyl-tRNA synthetase beta subunit FY134_01405 PF04463 Protein of unknown function (DUF523) FY134_01410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_01410 PF00672 HAMP domain FY134_01420 PF02844 Phosphoribosylglycinamide synthetase, N domain FY134_01420 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY134_01420 PF02843 Phosphoribosylglycinamide synthetase, C domain FY134_01425 PF09371 Tex-like protein N-terminal domain FY134_01425 PF00575 S1 RNA binding domain FY134_01425 PF17674 HHH domain FY134_01425 PF16921 Tex protein YqgF-like domain FY134_01440 PF01040 UbiA prenyltransferase family FY134_01455 PF03466 LysR substrate binding domain FY134_01455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_01465 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY134_01470 PF04452 RNA methyltransferase FY134_01475 PF01384 Phosphate transporter family FY134_01485 PF05116 Sucrose-6F-phosphate phosphohydrolase FY134_01490 PF13439 Glycosyltransferase Family 4 FY134_01490 PF00534 Glycosyl transferases group 1 FY134_01495 PF00392 Bacterial regulatory proteins, gntR family FY134_01495 PF07729 FCD domain FY134_01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_01505 PF03466 LysR substrate binding domain FY134_01510 PF01565 FAD binding domain FY134_01510 PF02913 FAD linked oxidases, C-terminal domain FY134_01515 PF02913 FAD linked oxidases, C-terminal domain FY134_01515 PF01565 FAD binding domain FY134_01520 PF02754 Cysteine-rich domain FY134_01520 PF13183 4Fe-4S dicluster domain FY134_01530 PF17969 L,D-transpeptidase C-terminal domain FY134_01530 PF03734 L,D-transpeptidase catalytic domain FY134_01535 PF03352 Methyladenine glycosylase FY134_01535 PF00117 Glutamine amidotransferase class-I FY134_01535 PF00958 GMP synthase C terminal domain FY134_01535 PF13673 Acetyltransferase (GNAT) domain FY134_01535 PF13302 Acetyltransferase (GNAT) domain FY134_01545 PF03601 Conserved hypothetical protein 698 FY134_01550 PF03466 LysR substrate binding domain FY134_01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_01570 PF03129 Anticodon binding domain FY134_01570 PF13393 Histidyl-tRNA synthetase FY134_01580 PF13393 Histidyl-tRNA synthetase FY134_01585 PF01634 ATP phosphoribosyltransferase FY134_01590 PF07681 DoxX FY134_01600 PF00118 TCP-1/cpn60 chaperonin family FY134_01605 PF00166 Chaperonin 10 Kd subunit FY134_01615 PF01687 Riboflavin kinase FY134_01615 PF06574 FAD synthetase FY134_01620 PF00133 tRNA synthetases class I (I, L, M and V) FY134_01620 PF08264 Anticodon-binding domain of tRNA FY134_01630 PF14437 MafB19-like deaminase FY134_01635 PF00849 RNA pseudouridylate synthase FY134_01635 PF01479 S4 domain FY134_01645 PF01734 Patatin-like phospholipase FY134_01650 PF00999 Sodium/hydrogen exchanger family FY134_01650 PF02254 TrkA-N domain FY134_01655 PF01523 Putative modulator of DNA gyrase FY134_01660 PF00459 Inositol monophosphatase family FY134_01670 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY134_01670 PF00534 Glycosyl transferases group 1 FY134_01680 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY134_01690 PF08676 MutL C terminal dimerisation domain FY134_01690 PF01119 DNA mismatch repair protein, C-terminal domain FY134_01695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_01695 PF00512 His Kinase A (phospho-acceptor) domain FY134_01695 PF09456 RcsC Alpha-Beta-Loop (ABL) FY134_01695 PF00072 Response regulator receiver domain FY134_01700 PF13188 PAS domain FY134_01700 PF03707 Bacterial signalling protein N terminal repeat FY134_01700 PF00990 Diguanylate cyclase, GGDEF domain FY134_01700 PF00563 EAL domain FY134_01705 PF08450 SMP-30/Gluconolactonase/LRE-like region FY134_01710 PF01081 KDPG and KHG aldolase FY134_01715 PF05035 2-keto-3-deoxy-galactonokinase FY134_01730 PF00196 Bacterial regulatory proteins, luxR family FY134_01730 PF03472 Autoinducer binding domain FY134_01740 PF10609 NUBPL iron-transfer P-loop NTPase FY134_01745 PF01544 CorA-like Mg2+ transporter protein FY134_01750 PF02705 K+ potassium transporter FY134_01760 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter FY134_01765 PF00119 ATP synthase A chain FY134_01770 PF00137 ATP synthase subunit C FY134_01775 PF00430 ATP synthase B/B' CF(0) FY134_01780 PF00430 ATP synthase B/B' CF(0) FY134_01795 PF01351 Ribonuclease HII FY134_01810 PF02913 FAD linked oxidases, C-terminal domain FY134_01810 PF01565 FAD binding domain FY134_01815 PF01300 Telomere recombination FY134_01815 PF03481 Putative GTP-binding controlling metal-binding FY134_01825 PF00355 Rieske [2Fe-2S] domain FY134_01825 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY134_01830 PF00970 Oxidoreductase FAD-binding domain FY134_01830 PF00175 Oxidoreductase NAD-binding domain FY134_01830 PF00111 2Fe-2S iron-sulfur cluster binding domain FY134_01835 PF07886 BA14K-like protein FY134_01840 PF07886 BA14K-like protein FY134_01850 PF02770 Acyl-CoA dehydrogenase, middle domain FY134_01850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY134_01850 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY134_01850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY134_01865 PF05958 tRNA (Uracil-5-)-methyltransferase FY134_01870 PF01728 FtsJ-like methyltransferase FY134_01870 PF01479 S4 domain FY134_01875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_01875 PF00672 HAMP domain FY134_01885 PF13404 AsnC-type helix-turn-helix domain FY134_01885 PF01037 Lrp/AsnC ligand binding domain FY134_01915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY134_01915 PF02779 Transketolase, pyrimidine binding domain FY134_01915 PF02780 Transketolase, C-terminal domain FY134_01920 PF02678 Pirin FY134_01920 PF05726 Pirin C-terminal cupin domain FY134_01925 PF02609 Exonuclease VII small subunit FY134_01930 PF00850 Histone deacetylase domain FY134_01935 PF02632 BioY family FY134_01940 PF02361 Cobalt transport protein FY134_01945 PF00005 ABC transporter FY134_01950 PF06224 Winged helix DNA-binding domain FY134_01955 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY134_01955 PF00925 GTP cyclohydrolase II FY134_01960 PF01264 Chorismate synthase FY134_01970 PF00300 Histidine phosphatase superfamily (branch 1) FY134_01980 PF01556 DnaJ C terminal domain FY134_01980 PF00684 DnaJ central domain FY134_01980 PF00226 DnaJ domain FY134_01990 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY134_01990 PF01243 Pyridoxamine 5'-phosphate oxidase FY134_02005 PF13419 Haloacid dehalogenase-like hydrolase FY134_02015 PF01523 Putative modulator of DNA gyrase FY134_02025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY134_02025 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY134_02030 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY134_02035 PF01040 UbiA prenyltransferase family FY134_02040 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY134_02045 PF00510 Cytochrome c oxidase subunit III FY134_02055 PF02104 SURF1 family FY134_02060 PF02401 LytB protein FY134_02065 PF01636 Phosphotransferase enzyme family FY134_02070 PF00075 RNase H FY134_02085 PF00462 Glutaredoxin FY134_02085 PF08534 Redoxin FY134_02095 PF02622 Uncharacterized ACR, COG1678 FY134_02105 PF15887 Putative zinc-binding metallo-peptidase FY134_02105 PF10005 zinc-ribbon domain FY134_02110 PF00563 EAL domain FY134_02110 PF13185 GAF domain FY134_02110 PF00990 Diguanylate cyclase, GGDEF domain FY134_02115 PF13302 Acetyltransferase (GNAT) domain FY134_02120 PF00675 Insulinase (Peptidase family M16) FY134_02120 PF05193 Peptidase M16 inactive domain FY134_02125 PF14821 Threonine synthase N terminus FY134_02125 PF00291 Pyridoxal-phosphate dependent enzyme FY134_02145 PF13419 Haloacid dehalogenase-like hydrolase FY134_02150 PF07729 FCD domain FY134_02150 PF00392 Bacterial regulatory proteins, gntR family FY134_02165 PF01555 DNA methylase FY134_02165 PF18755 Restriction Enzyme Adenine Methylase Associated FY134_02175 PF00730 HhH-GPD superfamily base excision DNA repair protein FY134_02175 PF14815 NUDIX domain FY134_02185 PF13462 Thioredoxin FY134_02190 PF02463 RecF/RecN/SMC N terminal domain FY134_02195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY134_02200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY134_02200 PF02896 PEP-utilising enzyme, TIM barrel domain FY134_02200 PF00391 PEP-utilising enzyme, mobile domain FY134_02215 PF00375 Sodium:dicarboxylate symporter family FY134_02235 PF00440 Bacterial regulatory proteins, tetR family FY134_02240 PF00043 Glutathione S-transferase, C-terminal domain FY134_02240 PF02798 Glutathione S-transferase, N-terminal domain FY134_02245 PF06039 Malate:quinone oxidoreductase (Mqo) FY134_02260 PF00009 Elongation factor Tu GTP binding domain FY134_02265 PF01507 Phosphoadenosine phosphosulfate reductase family FY134_02270 PF01507 Phosphoadenosine phosphosulfate reductase family FY134_02275 PF02082 Transcriptional regulator FY134_02285 PF00528 Binding-protein-dependent transport system inner membrane component FY134_02290 PF00528 Binding-protein-dependent transport system inner membrane component FY134_02295 PF00005 ABC transporter FY134_02295 PF12857 TOBE-like domain FY134_02300 PF08659 KR domain FY134_02300 PF02801 Beta-ketoacyl synthase, C-terminal domain FY134_02300 PF00550 Phosphopantetheine attachment site FY134_02300 PF16197 Ketoacyl-synthetase C-terminal extension FY134_02300 PF00698 Acyl transferase domain FY134_02300 PF00107 Zinc-binding dehydrogenase FY134_02300 PF00109 Beta-ketoacyl synthase, N-terminal domain FY134_02300 PF08240 Alcohol dehydrogenase GroES-like domain FY134_02300 PF14765 Polyketide synthase dehydratase FY134_02305 PF00989 PAS fold FY134_02305 PF00990 Diguanylate cyclase, GGDEF domain FY134_02305 PF01590 GAF domain FY134_02305 PF00563 EAL domain FY134_02315 PF00440 Bacterial regulatory proteins, tetR family FY134_02315 PF13977 BetI-type transcriptional repressor, C-terminal FY134_02320 PF00171 Aldehyde dehydrogenase family FY134_02325 PF05199 GMC oxidoreductase FY134_02325 PF00732 GMC oxidoreductase FY134_02340 PF00654 Voltage gated chloride channel FY134_02360 PF13417 Glutathione S-transferase, N-terminal domain FY134_02360 PF00043 Glutathione S-transferase, C-terminal domain FY134_02370 PF07690 Major Facilitator Superfamily FY134_02380 PF04679 ATP dependent DNA ligase C terminal region FY134_02380 PF01068 ATP dependent DNA ligase domain FY134_02380 PF04675 DNA ligase N terminus FY134_02390 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FY134_02395 PF00403 Heavy-metal-associated domain FY134_02400 PF03734 L,D-transpeptidase catalytic domain FY134_02400 PF17969 L,D-transpeptidase C-terminal domain FY134_02405 PF17969 L,D-transpeptidase C-terminal domain FY134_02405 PF03734 L,D-transpeptidase catalytic domain FY134_02410 PF01047 MarR family FY134_02415 PF02566 OsmC-like protein FY134_02430 PF12848 ABC transporter FY134_02430 PF00005 ABC transporter FY134_02440 PF01047 MarR family FY134_02460 PF03466 LysR substrate binding domain FY134_02460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_02465 PF00106 short chain dehydrogenase FY134_02480 PF05872 Bacterial protein of unknown function (DUF853) FY134_02495 PF01638 HxlR-like helix-turn-helix FY134_02500 PF00106 short chain dehydrogenase FY134_02505 PF12833 Helix-turn-helix domain FY134_02515 PF00248 Aldo/keto reductase family FY134_02520 PF08279 HTH domain FY134_02520 PF13280 WYL domain FY134_02535 PF01063 Amino-transferase class IV FY134_02540 PF00672 HAMP domain FY134_02540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_02545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_02545 PF03466 LysR substrate binding domain FY134_02560 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY134_02560 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY134_02570 PF08279 HTH domain FY134_02570 PF13280 WYL domain FY134_02575 PF01810 LysE type translocator FY134_02580 PF01322 Cytochrome C' FY134_02585 PF00034 Cytochrome c FY134_02615 PF00561 alpha/beta hydrolase fold FY134_02620 PF09278 MerR, DNA binding FY134_02620 PF00376 MerR family regulatory protein FY134_02630 PF02583 Metal-sensitive transcriptional repressor FY134_02635 PF01545 Cation efflux family FY134_02645 PF00005 ABC transporter FY134_02645 PF00571 CBS domain FY134_02650 PF00528 Binding-protein-dependent transport system inner membrane component FY134_02660 PF00326 Prolyl oligopeptidase family FY134_02660 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY134_02670 PF00701 Dihydrodipicolinate synthetase family FY134_02680 PF12833 Helix-turn-helix domain FY134_02680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY134_02680 PF02805 Metal binding domain of Ada FY134_02680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY134_02690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY134_02710 PF03006 Haemolysin-III related FY134_02720 PF01641 SelR domain FY134_02725 PF13244 Domain of unknown function (DUF4040) FY134_02725 PF00361 Proton-conducting membrane transporter FY134_02725 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY134_02730 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY134_02735 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY134_02740 PF00361 Proton-conducting membrane transporter FY134_02745 PF01899 Na+/H+ ion antiporter subunit FY134_02750 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY134_02755 PF03334 Na+/H+ antiporter subunit FY134_02760 PF05443 ROS/MUCR transcriptional regulator protein FY134_02775 PF02657 Fe-S metabolism associated domain FY134_02780 PF17264 Family of unknown function (DUF5330) FY134_02785 PF00512 His Kinase A (phospho-acceptor) domain FY134_02785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_02820 PF01810 LysE type translocator FY134_02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_02825 PF03466 LysR substrate binding domain FY134_02830 PF00144 Beta-lactamase FY134_02845 PF00912 Transglycosylase FY134_02845 PF00905 Penicillin binding protein transpeptidase domain FY134_02850 PF03692 Putative zinc- or iron-chelating domain FY134_02855 PF00905 Penicillin binding protein transpeptidase domain FY134_02865 PF00403 Heavy-metal-associated domain FY134_02870 PF00376 MerR family regulatory protein FY134_02870 PF09278 MerR, DNA binding FY134_02900 PF08244 Glycosyl hydrolases family 32 C terminal FY134_02900 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY134_02905 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY134_02915 PF01037 Lrp/AsnC ligand binding domain FY134_02915 PF13404 AsnC-type helix-turn-helix domain FY134_02955 PF04860 Phage portal protein FY134_03170 PF00239 Resolvase, N terminal domain FY134_03170 PF07508 Recombinase FY134_03170 PF13408 Recombinase zinc beta ribbon domain FY134_03255 PF00072 Response regulator receiver domain FY134_03255 PF00486 Transcriptional regulatory protein, C terminal FY134_03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_03275 PF03100 CcmE FY134_03280 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY134_03280 PF01578 Cytochrome C assembly protein FY134_03285 PF03918 Cytochrome C biogenesis protein FY134_03290 PF13180 PDZ domain FY134_03295 PF00486 Transcriptional regulatory protein, C terminal FY134_03295 PF00072 Response regulator receiver domain FY134_03300 PF00672 HAMP domain FY134_03300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_03300 PF00512 His Kinase A (phospho-acceptor) domain FY134_03305 PF04134 Protein of unknown function, DUF393 FY134_03315 PF06629 MltA-interacting protein MipA FY134_03320 PF08335 GlnD PII-uridylyltransferase FY134_03320 PF03710 Glutamate-ammonia ligase adenylyltransferase FY134_03325 PF00989 PAS fold FY134_03325 PF00512 His Kinase A (phospho-acceptor) domain FY134_03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_03335 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY134_03335 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY134_03335 PF01433 Peptidase family M1 domain FY134_03340 PF00892 EamA-like transporter family FY134_03355 PF00012 Hsp70 protein FY134_03360 PF00563 EAL domain FY134_03360 PF00990 Diguanylate cyclase, GGDEF domain FY134_03360 PF03707 Bacterial signalling protein N terminal repeat FY134_03380 PF16925 Tetracyclin repressor-like, C-terminal domain FY134_03380 PF00440 Bacterial regulatory proteins, tetR family FY134_03395 PF08240 Alcohol dehydrogenase GroES-like domain FY134_03395 PF00107 Zinc-binding dehydrogenase FY134_03400 PF01638 HxlR-like helix-turn-helix FY134_03405 PF02673 Bacitracin resistance protein BacA FY134_03410 PF00571 CBS domain FY134_03410 PF01769 Divalent cation transporter FY134_03410 PF03448 MgtE intracellular N domain FY134_03415 PF07690 Major Facilitator Superfamily FY134_03420 PF00781 Diacylglycerol kinase catalytic domain FY134_03425 PF00202 Aminotransferase class-III FY134_03440 PF09957 Bacterial antitoxin of type II TA system, VapB FY134_03445 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY134_03445 PF01048 Phosphorylase superfamily FY134_03475 PF00155 Aminotransferase class I and II FY134_03485 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_03485 PF14759 Reductase C-terminal FY134_03490 PF03328 HpcH/HpaI aldolase/citrate lyase family FY134_03510 PF02530 Porin subfamily FY134_03515 PF02530 Porin subfamily FY134_03520 PF01464 Transglycosylase SLT domain FY134_03520 PF14718 Soluble lytic murein transglycosylase L domain FY134_03530 PF00701 Dihydrodipicolinate synthetase family FY134_03535 PF01668 SmpB protein FY134_03540 PF00672 HAMP domain FY134_03540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_03550 PF01192 RNA polymerase Rpb6 FY134_03555 PF13291 ACT domain FY134_03555 PF04607 Region found in RelA / SpoT proteins FY134_03555 PF02824 TGS domain FY134_03570 PF01648 4'-phosphopantetheinyl transferase superfamily FY134_03575 PF10502 Signal peptidase, peptidase S26 FY134_03580 PF00035 Double-stranded RNA binding motif FY134_03580 PF14622 Ribonuclease-III-like FY134_03585 PF07650 KH domain FY134_03585 PF01926 50S ribosome-binding GTPase FY134_03590 PF00027 Cyclic nucleotide-binding domain FY134_03590 PF13545 Crp-like helix-turn-helix domain FY134_03595 PF00072 Response regulator receiver domain FY134_03600 PF11967 Recombination protein O N terminal FY134_03600 PF02565 Recombination protein O C terminal FY134_03605 PF07690 Major Facilitator Superfamily FY134_03610 PF08241 Methyltransferase domain FY134_03620 PF01966 HD domain FY134_03630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY134_03640 PF00005 ABC transporter FY134_03645 PF00528 Binding-protein-dependent transport system inner membrane component FY134_03650 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY134_03655 PF00924 Mechanosensitive ion channel FY134_03655 PF05552 Conserved TM helix FY134_03665 PF01966 HD domain FY134_03670 PF01571 Aminomethyltransferase folate-binding domain FY134_03690 PF00293 NUDIX domain FY134_03695 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY134_03705 PF00990 Diguanylate cyclase, GGDEF domain FY134_03705 PF00072 Response regulator receiver domain FY134_03710 PF01066 CDP-alcohol phosphatidyltransferase FY134_03715 PF02666 Phosphatidylserine decarboxylase FY134_03720 PF00664 ABC transporter transmembrane region FY134_03720 PF00005 ABC transporter FY134_03730 PF03641 Possible lysine decarboxylase FY134_03735 PF03717 Penicillin-binding Protein dimerisation domain FY134_03735 PF00905 Penicillin binding protein transpeptidase domain FY134_03740 PF00892 EamA-like transporter family FY134_03745 PF00561 alpha/beta hydrolase fold FY134_03760 PF04480 Protein of unknown function (DUF559) FY134_03765 PF01406 tRNA synthetases class I (C) catalytic domain FY134_03765 PF09190 DALR domain FY134_03770 PF00106 short chain dehydrogenase FY134_03775 PF13537 Glutamine amidotransferase domain FY134_03775 PF00156 Phosphoribosyl transferase domain FY134_03780 PF02674 Colicin V production protein FY134_03785 PF06745 KaiC FY134_03785 PF18073 Rubredoxin metal binding domain FY134_03800 PF00842 Alanine racemase, C-terminal domain FY134_03800 PF01168 Alanine racemase, N-terminal domain FY134_03805 PF12852 Cupin FY134_03805 PF12833 Helix-turn-helix domain FY134_03810 PF03591 AzlC protein FY134_03820 PF00772 DnaB-like helicase N terminal domain FY134_03820 PF03796 DnaB-like helicase C terminal domain FY134_03825 PF01047 MarR family FY134_03835 PF13533 Biotin-lipoyl like FY134_03840 PF03948 Ribosomal protein L9, C-terminal domain FY134_03840 PF01281 Ribosomal protein L9, N-terminal domain FY134_03850 PF01084 Ribosomal protein S18 FY134_03855 PF01250 Ribosomal protein S6 FY134_03860 PF00248 Aldo/keto reductase family FY134_03865 PF00698 Acyl transferase domain FY134_03875 PF00550 Phosphopantetheine attachment site FY134_03880 PF00109 Beta-ketoacyl synthase, N-terminal domain FY134_03880 PF02801 Beta-ketoacyl synthase, C-terminal domain FY134_03885 PF02618 YceG-like family FY134_03890 PF08340 Domain of unknown function (DUF1732) FY134_03890 PF03755 YicC-like family, N-terminal region FY134_03895 PF00625 Guanylate kinase FY134_03900 PF01738 Dienelactone hydrolase family FY134_03905 PF00398 Ribosomal RNA adenine dimethylase FY134_03910 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY134_03920 PF03968 OstA-like protein FY134_03920 PF04453 LPS transport system D FY134_03935 PF02789 Cytosol aminopeptidase family, N-terminal domain FY134_03935 PF00883 Cytosol aminopeptidase family, catalytic domain FY134_03945 PF00563 EAL domain FY134_03945 PF03707 Bacterial signalling protein N terminal repeat FY134_03945 PF00990 Diguanylate cyclase, GGDEF domain FY134_03950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_03955 PF03707 Bacterial signalling protein N terminal repeat FY134_03955 PF00990 Diguanylate cyclase, GGDEF domain FY134_03955 PF00563 EAL domain FY134_03960 PF00989 PAS fold FY134_03960 PF00512 His Kinase A (phospho-acceptor) domain FY134_03960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_03965 PF00196 Bacterial regulatory proteins, luxR family FY134_03965 PF00072 Response regulator receiver domain FY134_03975 PF00005 ABC transporter FY134_03975 PF12848 ABC transporter FY134_03980 PF00990 Diguanylate cyclase, GGDEF domain FY134_03980 PF17158 Membrane-associated sensor, integral membrane domain FY134_03985 PF13417 Glutathione S-transferase, N-terminal domain FY134_03990 PF00334 Nucleoside diphosphate kinase FY134_04010 PF02391 MoaE protein FY134_04015 PF02597 ThiS family FY134_04020 PF01066 CDP-alcohol phosphatidyltransferase FY134_04025 PF01541 GIY-YIG catalytic domain FY134_04025 PF02151 UvrB/uvrC motif FY134_04025 PF08459 UvrC Helix-hairpin-helix N-terminal FY134_04035 PF13505 Outer membrane protein beta-barrel domain FY134_04040 PF00043 Glutathione S-transferase, C-terminal domain FY134_04040 PF13417 Glutathione S-transferase, N-terminal domain FY134_04045 PF00445 Ribonuclease T2 family FY134_04060 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY134_04065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY134_04065 PF00384 Molybdopterin oxidoreductase FY134_04065 PF01568 Molydopterin dinucleotide binding domain FY134_04070 PF00293 NUDIX domain FY134_04080 PF00551 Formyl transferase FY134_04085 PF00586 AIR synthase related protein, N-terminal domain FY134_04085 PF02769 AIR synthase related protein, C-terminal domain FY134_04090 PF01594 AI-2E family transporter FY134_04100 PF02503 Polyphosphate kinase middle domain FY134_04100 PF13090 Polyphosphate kinase C-terminal domain 2 FY134_04100 PF17941 Polyphosphate kinase C-terminal domain 1 FY134_04100 PF13089 Polyphosphate kinase N-terminal domain FY134_04105 PF02541 Ppx/GppA phosphatase family FY134_04110 PF00132 Bacterial transferase hexapeptide (six repeats) FY134_04130 PF00211 Adenylate and Guanylate cyclase catalytic domain FY134_04140 PF00570 HRDC domain FY134_04140 PF01612 3'-5' exonuclease FY134_04145 PF07690 Major Facilitator Superfamily FY134_04150 PF01336 OB-fold nucleic acid binding domain FY134_04150 PF02938 GAD domain FY134_04150 PF00152 tRNA synthetases class II (D, K and N) FY134_04160 PF06123 Inner membrane protein CreD FY134_04165 PF01740 STAS domain FY134_04165 PF00916 Sulfate permease family FY134_04175 PF00521 DNA gyrase/topoisomerase IV, subunit A FY134_04175 PF03989 DNA gyrase C-terminal domain, beta-propeller FY134_04180 PF04376 Arginine-tRNA-protein transferase, N terminus FY134_04180 PF04377 Arginine-tRNA-protein transferase, C terminus FY134_04190 PF00490 Delta-aminolevulinic acid dehydratase FY134_04210 PF00464 Serine hydroxymethyltransferase FY134_04215 PF03477 ATP cone domain FY134_04220 PF01872 RibD C-terminal domain FY134_04220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY134_04225 PF00677 Lumazine binding domain FY134_04230 PF01810 LysE type translocator FY134_04235 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY134_04240 PF01029 NusB family FY134_04245 PF07690 Major Facilitator Superfamily FY134_04250 PF03030 Inorganic H+ pyrophosphatase FY134_04270 PF02504 Fatty acid synthesis protein FY134_04275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY134_04275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY134_04280 PF00216 Bacterial DNA-binding protein FY134_04285 PF13411 MerR HTH family regulatory protein FY134_04300 PF00403 Heavy-metal-associated domain FY134_04305 PF00175 Oxidoreductase NAD-binding domain FY134_04305 PF00970 Oxidoreductase FAD-binding domain FY134_04305 PF00111 2Fe-2S iron-sulfur cluster binding domain FY134_04310 PF09278 MerR, DNA binding FY134_04310 PF00376 MerR family regulatory protein FY134_04315 PF00528 Binding-protein-dependent transport system inner membrane component FY134_04320 PF00528 Binding-protein-dependent transport system inner membrane component FY134_04320 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_04325 PF00005 ABC transporter FY134_04325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_04330 PF00005 ABC transporter FY134_04330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_04335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_04345 PF02386 Cation transport protein FY134_04350 PF00291 Pyridoxal-phosphate dependent enzyme FY134_04350 PF00585 C-terminal regulatory domain of Threonine dehydratase FY134_04360 PF00990 Diguanylate cyclase, GGDEF domain FY134_04360 PF00072 Response regulator receiver domain FY134_04365 PF02525 Flavodoxin-like fold FY134_04370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_04370 PF03466 LysR substrate binding domain FY134_04375 PF02872 5'-nucleotidase, C-terminal domain FY134_04375 PF00149 Calcineurin-like phosphoesterase FY134_04400 PF00581 Rhodanese-like domain FY134_04405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY134_04405 PF02272 DHHA1 domain FY134_04405 PF01411 tRNA synthetases class II (A) FY134_04410 PF00291 Pyridoxal-phosphate dependent enzyme FY134_04410 PF00571 CBS domain FY134_04415 PF03441 FAD binding domain of DNA photolyase FY134_04415 PF00875 DNA photolyase FY134_04425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY134_04425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY134_04455 PF06055 Exopolysaccharide synthesis, ExoD FY134_04560 PF03354 Phage Terminase FY134_04625 PF02397 Bacterial sugar transferase FY134_04630 PF00534 Glycosyl transferases group 1 FY134_04630 PF13439 Glycosyltransferase Family 4 FY134_04655 PF02628 Cytochrome oxidase assembly protein FY134_04660 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY134_04665 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY134_04670 PF00491 Arginase family FY134_04675 PF13744 Helix-turn-helix domain FY134_04680 PF05973 Phage derived protein Gp49-like (DUF891) FY134_04685 PF00380 Ribosomal protein S9/S16 FY134_04690 PF00572 Ribosomal protein L13 FY134_04700 PF13380 CoA binding domain FY134_04705 PF01053 Cys/Met metabolism PLP-dependent enzyme FY134_04730 PF00067 Cytochrome P450 FY134_04735 PF00990 Diguanylate cyclase, GGDEF domain FY134_04740 PF00574 Clp protease FY134_04745 PF07724 AAA domain (Cdc48 subfamily) FY134_04745 PF06689 ClpX C4-type zinc finger FY134_04745 PF10431 C-terminal, D2-small domain, of ClpB protein FY134_04750 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY134_04750 PF05362 Lon protease (S16) C-terminal proteolytic domain FY134_04750 PF00004 ATPase family associated with various cellular activities (AAA) FY134_04755 PF00216 Bacterial DNA-binding protein FY134_04760 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY134_04790 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY134_04795 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY134_04800 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY134_04810 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY134_04825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY134_04825 PF10531 SLBB domain FY134_04825 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY134_04830 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY134_04830 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY134_04830 PF00384 Molybdopterin oxidoreductase FY134_04835 PF00146 NADH dehydrogenase FY134_04840 PF12838 4Fe-4S dicluster domain FY134_04845 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY134_04850 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY134_04855 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY134_04855 PF00361 Proton-conducting membrane transporter FY134_04860 PF00361 Proton-conducting membrane transporter FY134_04860 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY134_04865 PF00361 Proton-conducting membrane transporter FY134_04870 PF03099 Biotin/lipoate A/B protein ligase family FY134_04870 PF02237 Biotin protein ligase C terminal domain FY134_04870 PF08279 HTH domain FY134_04875 PF17770 Ribonuclease J C-terminal domain FY134_04875 PF12706 Beta-lactamase superfamily domain FY134_04875 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY134_04885 PF03129 Anticodon binding domain FY134_04885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY134_04890 PF02687 FtsX-like permease family FY134_04890 PF12704 MacB-like periplasmic core domain FY134_04895 PF00005 ABC transporter FY134_04900 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY134_04900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY134_04900 PF14579 Helix-hairpin-helix motif FY134_04900 PF02811 PHP domain FY134_04910 PF00817 impB/mucB/samB family FY134_04910 PF11799 impB/mucB/samB family C-terminal domain FY134_04930 PF00072 Response regulator receiver domain FY134_04935 PF00990 Diguanylate cyclase, GGDEF domain FY134_04935 PF00072 Response regulator receiver domain FY134_04940 PF00471 Ribosomal protein L33 FY134_04945 PF07690 Major Facilitator Superfamily FY134_04960 PF17876 Cold shock domain FY134_04960 PF08206 Ribonuclease B OB domain FY134_04960 PF00773 RNB domain FY134_04960 PF00575 S1 RNA binding domain FY134_04960 PF08461 Ribonuclease R winged-helix domain FY134_04965 PF01751 Toprim domain FY134_04965 PF01131 DNA topoisomerase FY134_04965 PF13368 Topoisomerase C-terminal repeat FY134_04965 PF01396 Topoisomerase DNA binding C4 zinc finger FY134_04975 PF02481 DNA recombination-mediator protein A FY134_04975 PF17782 DprA winged helix domain FY134_04980 PF02660 Glycerol-3-phosphate acyltransferase FY134_04985 PF01979 Amidohydrolase family FY134_04990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY134_04990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY134_05000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY134_05000 PF02770 Acyl-CoA dehydrogenase, middle domain FY134_05000 PF18158 Adaptive response protein AidB N-terminal domain FY134_05005 PF00583 Acetyltransferase (GNAT) family FY134_05035 PF03652 Holliday junction resolvase FY134_05040 PF08274 PhnA Zinc-Ribbon FY134_05040 PF03831 PhnA domain FY134_05050 PF02686 Glu-tRNAGln amidotransferase C subunit FY134_05055 PF01425 Amidase FY134_05060 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY134_05075 PF02934 GatB/GatE catalytic domain FY134_05075 PF02637 GatB domain FY134_05085 PF00583 Acetyltransferase (GNAT) family FY134_05100 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY134_05105 PF02785 Biotin carboxylase C-terminal domain FY134_05105 PF00289 Biotin carboxylase, N-terminal domain FY134_05105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY134_05110 PF00364 Biotin-requiring enzyme FY134_05115 PF01220 Dehydroquinase class II FY134_05120 PF06965 Na+/H+ antiporter 1 FY134_05120 PF13462 Thioredoxin FY134_05125 PF00155 Aminotransferase class I and II FY134_05150 PF12111 Polyribonucleotide phosphorylase C terminal FY134_05150 PF10150 Ribonuclease E/G family FY134_05150 PF00575 S1 RNA binding domain FY134_05155 PF01520 N-acetylmuramoyl-L-alanine amidase FY134_05160 PF17092 Penicillin-binding protein OB-like domain FY134_05160 PF00912 Transglycosylase FY134_05160 PF00905 Penicillin binding protein transpeptidase domain FY134_05180 PF01513 ATP-NAD kinase FY134_05185 PF02567 Phenazine biosynthesis-like protein FY134_05200 PF00111 2Fe-2S iron-sulfur cluster binding domain FY134_05210 PF00809 Pterin binding enzyme FY134_05215 PF02152 Dihydroneopterin aldolase FY134_05220 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY134_05230 PF05128 Domain of unknown function (DUF697) FY134_05235 PF04317 YcjX-like family, DUF463 FY134_05245 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY134_05260 PF08448 PAS fold FY134_05260 PF13188 PAS domain FY134_05260 PF00072 Response regulator receiver domain FY134_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_05260 PF00512 His Kinase A (phospho-acceptor) domain FY134_05265 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY134_05270 PF07724 AAA domain (Cdc48 subfamily) FY134_05270 PF00004 ATPase family associated with various cellular activities (AAA) FY134_05270 PF02861 Clp amino terminal domain, pathogenicity island component FY134_05270 PF10431 C-terminal, D2-small domain, of ClpB protein FY134_05270 PF17871 AAA lid domain FY134_05285 PF03466 LysR substrate binding domain FY134_05285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_05295 PF01230 HIT domain FY134_05320 PF00318 Ribosomal protein S2 FY134_05325 PF00889 Elongation factor TS FY134_05330 PF00696 Amino acid kinase family FY134_05335 PF01765 Ribosome recycling factor FY134_05340 PF01255 Putative undecaprenyl diphosphate synthase FY134_05350 PF17820 PDZ domain FY134_05350 PF02163 Peptidase family M50 FY134_05355 PF01103 Surface antigen FY134_05355 PF07244 Surface antigen variable number repeat FY134_05360 PF00132 Bacterial transferase hexapeptide (six repeats) FY134_05360 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY134_05365 PF07977 FabA-like domain FY134_05370 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY134_05370 PF00132 Bacterial transferase hexapeptide (six repeats) FY134_05375 PF17930 LpxI N-terminal domain FY134_05375 PF06230 LpxI C-terminal domain FY134_05380 PF02684 Lipid-A-disaccharide synthetase FY134_05385 PF07729 FCD domain FY134_05385 PF00392 Bacterial regulatory proteins, gntR family FY134_05390 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_05395 PF00528 Binding-protein-dependent transport system inner membrane component FY134_05400 PF00528 Binding-protein-dependent transport system inner membrane component FY134_05405 PF00005 ABC transporter FY134_05410 PF00285 Citrate synthase, C-terminal domain FY134_05425 PF00717 Peptidase S24-like FY134_05425 PF01726 LexA DNA binding domain FY134_05430 PF00005 ABC transporter FY134_05435 PF00528 Binding-protein-dependent transport system inner membrane component FY134_05440 PF00528 Binding-protein-dependent transport system inner membrane component FY134_05445 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_05450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY134_05450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY134_05455 PF00005 ABC transporter FY134_05455 PF17912 MalK OB fold domain FY134_05460 PF00528 Binding-protein-dependent transport system inner membrane component FY134_05465 PF00528 Binding-protein-dependent transport system inner membrane component FY134_05470 PF01547 Bacterial extracellular solute-binding protein FY134_05480 PF13378 Enolase C-terminal domain-like FY134_05480 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY134_05490 PF08240 Alcohol dehydrogenase GroES-like domain FY134_05490 PF00107 Zinc-binding dehydrogenase FY134_05495 PF04115 Ureidoglycolate lyase FY134_05500 PF00005 ABC transporter FY134_05505 PF00005 ABC transporter FY134_05505 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY134_05515 PF13458 Periplasmic binding protein FY134_05520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY134_05520 PF02770 Acyl-CoA dehydrogenase, middle domain FY134_05520 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY134_05520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY134_05525 PF00106 short chain dehydrogenase FY134_05530 PF00501 AMP-binding enzyme FY134_05530 PF07993 Male sterility protein FY134_05530 PF00550 Phosphopantetheine attachment site FY134_05535 PF00378 Enoyl-CoA hydratase/isomerase FY134_05545 PF07729 FCD domain FY134_05545 PF00392 Bacterial regulatory proteins, gntR family FY134_05550 PF01571 Aminomethyltransferase folate-binding domain FY134_05570 PF00793 DAHP synthetase I family FY134_05575 PF03952 Enolase, N-terminal domain FY134_05575 PF00113 Enolase, C-terminal TIM barrel domain FY134_05585 PF00676 Dehydrogenase E1 component FY134_05590 PF00364 Biotin-requiring enzyme FY134_05590 PF02779 Transketolase, pyrimidine binding domain FY134_05590 PF02780 Transketolase, C-terminal domain FY134_05600 PF02817 e3 binding domain FY134_05600 PF00364 Biotin-requiring enzyme FY134_05600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY134_05610 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_05610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY134_05620 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY134_05620 PF04055 Radical SAM superfamily FY134_05625 PF00892 EamA-like transporter family FY134_05640 PF03364 Polyketide cyclase / dehydrase and lipid transport FY134_05645 PF02464 Competence-damaged protein FY134_05650 PF02542 YgbB family FY134_05650 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY134_05655 PF01207 Dihydrouridine synthase (Dus) FY134_05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_05660 PF00512 His Kinase A (phospho-acceptor) domain FY134_05660 PF00989 PAS fold FY134_05665 PF02954 Bacterial regulatory protein, Fis family FY134_05665 PF00072 Response regulator receiver domain FY134_05665 PF00158 Sigma-54 interaction domain FY134_05670 PF00989 PAS fold FY134_05670 PF00512 His Kinase A (phospho-acceptor) domain FY134_05670 PF00672 HAMP domain FY134_05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_05675 PF02954 Bacterial regulatory protein, Fis family FY134_05675 PF00072 Response regulator receiver domain FY134_05675 PF00158 Sigma-54 interaction domain FY134_05680 PF02080 TrkA-C domain FY134_05680 PF02254 TrkA-N domain FY134_05685 PF17209 Hfq protein FY134_05690 PF16360 GTP-binding GTPase Middle Region FY134_05690 PF13167 GTP-binding GTPase N-terminal FY134_05690 PF01926 50S ribosome-binding GTPase FY134_05695 PF03819 MazG nucleotide pyrophosphohydrolase domain FY134_05705 PF10414 Sirohaem synthase dimerisation region FY134_05705 PF14824 Sirohaem biosynthesis protein central FY134_05705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY134_05720 PF01795 MraW methylase family FY134_05725 PF00970 Oxidoreductase FAD-binding domain FY134_05725 PF00175 Oxidoreductase NAD-binding domain FY134_05730 PF07690 Major Facilitator Superfamily FY134_05745 PF02347 Glycine cleavage system P-protein FY134_05750 PF01597 Glycine cleavage H-protein FY134_05755 PF01571 Aminomethyltransferase folate-binding domain FY134_05755 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY134_05780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY134_05785 PF00849 RNA pseudouridylate synthase FY134_05785 PF01479 S4 domain FY134_05790 PF13419 Haloacid dehalogenase-like hydrolase FY134_05805 PF01042 Endoribonuclease L-PSP FY134_05810 PF00756 Putative esterase FY134_05820 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY134_05830 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY134_05830 PF00578 AhpC/TSA family FY134_05855 PF04542 Sigma-70 region 2 FY134_05855 PF08281 Sigma-70, region 4 FY134_05870 PF13936 Helix-turn-helix domain FY134_05870 PF00665 Integrase core domain FY134_05875 PF03358 NADPH-dependent FMN reductase FY134_05880 PF03960 ArsC family FY134_05885 PF01758 Sodium Bile acid symporter family FY134_05900 PF00654 Voltage gated chloride channel FY134_05905 PF12706 Beta-lactamase superfamily domain FY134_05905 PF03099 Biotin/lipoate A/B protein ligase family FY134_05910 PF01026 TatD related DNase FY134_05915 PF08264 Anticodon-binding domain of tRNA FY134_05915 PF09334 tRNA synthetases class I (M) FY134_05920 PF09115 DNA polymerase III, delta subunit, C terminal FY134_05925 PF02223 Thymidylate kinase FY134_05930 PF07943 Penicillin-binding protein 5, C-terminal domain FY134_05930 PF00768 D-alanyl-D-alanine carboxypeptidase FY134_05935 PF03330 Lytic transglycolase FY134_05935 PF05036 Sporulation related domain FY134_05975 PF00521 DNA gyrase/topoisomerase IV, subunit A FY134_05975 PF03989 DNA gyrase C-terminal domain, beta-propeller FY134_05980 PF01914 MarC family integral membrane protein FY134_05985 PF01743 Poly A polymerase head domain FY134_05985 PF00571 CBS domain FY134_05995 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY134_06000 PF00436 Single-strand binding protein family FY134_06005 PF17755 UvrA DNA-binding domain FY134_06005 PF17760 UvrA interaction domain FY134_06015 PF01207 Dihydrouridine synthase (Dus) FY134_06020 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY134_06025 PF00132 Bacterial transferase hexapeptide (six repeats) FY134_06035 PF00950 ABC 3 transport family FY134_06040 PF00005 ABC transporter FY134_06045 PF01297 Zinc-uptake complex component A periplasmic FY134_06050 PF00356 Bacterial regulatory proteins, lacI family FY134_06060 PF00248 Aldo/keto reductase family FY134_06070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY134_06070 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY134_06075 PF03597 Cytochrome oxidase maturation protein cbb3-type FY134_06085 PF05751 FixH FY134_06090 PF12801 4Fe-4S binding domain FY134_06090 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY134_06090 PF13746 4Fe-4S dicluster domain FY134_06110 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY134_06110 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY134_06125 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY134_06130 PF01740 STAS domain FY134_06130 PF00916 Sulfate permease family FY134_06140 PF00924 Mechanosensitive ion channel FY134_06145 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY134_06160 PF00376 MerR family regulatory protein FY134_06160 PF09278 MerR, DNA binding FY134_06165 PF00571 CBS domain FY134_06165 PF01769 Divalent cation transporter FY134_06165 PF03448 MgtE intracellular N domain FY134_06170 PF00384 Molybdopterin oxidoreductase FY134_06180 PF01327 Polypeptide deformylase FY134_06200 PF03099 Biotin/lipoate A/B protein ligase family FY134_06205 PF00107 Zinc-binding dehydrogenase FY134_06205 PF08240 Alcohol dehydrogenase GroES-like domain FY134_06230 PF07549 SecD/SecF GG Motif FY134_06230 PF02355 Protein export membrane protein FY134_06235 PF02699 Preprotein translocase subunit FY134_06250 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY134_06250 PF08240 Alcohol dehydrogenase GroES-like domain FY134_06255 PF00440 Bacterial regulatory proteins, tetR family FY134_06260 PF00067 Cytochrome P450 FY134_06270 PF00132 Bacterial transferase hexapeptide (six repeats) FY134_06270 PF06426 Serine acetyltransferase, N-terminal FY134_06280 PF00561 alpha/beta hydrolase fold FY134_06290 PF01494 FAD binding domain FY134_06295 PF01053 Cys/Met metabolism PLP-dependent enzyme FY134_06300 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_06305 PF00528 Binding-protein-dependent transport system inner membrane component FY134_06310 PF00528 Binding-protein-dependent transport system inner membrane component FY134_06315 PF00005 ABC transporter FY134_06330 PF17768 RecJ OB domain FY134_06330 PF01368 DHH family FY134_06330 PF02272 DHHA1 domain FY134_06340 PF01842 ACT domain FY134_06340 PF00742 Homoserine dehydrogenase FY134_06340 PF03447 Homoserine dehydrogenase, NAD binding domain FY134_06345 PF00155 Aminotransferase class I and II FY134_06350 PF01156 Inosine-uridine preferring nucleoside hydrolase FY134_06355 PF01925 Sulfite exporter TauE/SafE FY134_06370 PF08240 Alcohol dehydrogenase GroES-like domain FY134_06370 PF00107 Zinc-binding dehydrogenase FY134_06375 PF00109 Beta-ketoacyl synthase, N-terminal domain FY134_06375 PF02801 Beta-ketoacyl synthase, C-terminal domain FY134_06385 PF07977 FabA-like domain FY134_06390 PF00550 Phosphopantetheine attachment site FY134_06395 PF04055 Radical SAM superfamily FY134_06400 PF00027 Cyclic nucleotide-binding domain FY134_06400 PF13545 Crp-like helix-turn-helix domain FY134_06410 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY134_06415 PF17746 SfsA N-terminal OB domain FY134_06415 PF03749 Sugar fermentation stimulation protein RE domain FY134_06420 PF00557 Metallopeptidase family M24 FY134_06425 PF04002 RadC-like JAB domain FY134_06440 PF01474 Class-II DAHP synthetase family FY134_06450 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_06450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY134_06460 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY134_06465 PF13419 Haloacid dehalogenase-like hydrolase FY134_06480 PF00206 Lyase FY134_06480 PF10415 Fumarase C C-terminus FY134_06490 PF00117 Glutamine amidotransferase class-I FY134_06490 PF06418 CTP synthase N-terminus FY134_06495 PF03840 Preprotein translocase SecG subunit FY134_06500 PF00121 Triosephosphate isomerase FY134_06510 PF00204 DNA gyrase B FY134_06510 PF00986 DNA gyrase B subunit, carboxyl terminus FY134_06510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_06510 PF01751 Toprim domain FY134_06515 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_06520 PF16859 Tetracyclin repressor-like, C-terminal domain FY134_06520 PF00440 Bacterial regulatory proteins, tetR family FY134_06525 PF01209 ubiE/COQ5 methyltransferase family FY134_06535 PF00574 Clp protease FY134_06545 PF01022 Bacterial regulatory protein, arsR family FY134_06550 PF13091 PLD-like domain FY134_06555 PF00072 Response regulator receiver domain FY134_06560 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY134_06560 PF01571 Aminomethyltransferase folate-binding domain FY134_06560 PF16350 FAD dependent oxidoreductase central domain FY134_06560 PF01266 FAD dependent oxidoreductase FY134_06565 PF00924 Mechanosensitive ion channel FY134_06565 PF12795 Mechanosensitive ion channel porin domain FY134_06565 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY134_06635 PF00005 ABC transporter FY134_06640 PF02405 Permease MlaE FY134_06645 PF13378 Enolase C-terminal domain-like FY134_06645 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY134_06660 PF00390 Malic enzyme, N-terminal domain FY134_06660 PF03949 Malic enzyme, NAD binding domain FY134_06660 PF01515 Phosphate acetyl/butaryl transferase FY134_06670 PF00881 Nitroreductase family FY134_06675 PF07676 WD40-like Beta Propeller Repeat FY134_06680 PF00795 Carbon-nitrogen hydrolase FY134_06680 PF02540 NAD synthase FY134_06685 PF00884 Sulfatase FY134_06695 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_06695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY134_06710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY134_06710 PF05698 Bacterial trigger factor protein (TF) C-terminus FY134_06710 PF05697 Bacterial trigger factor protein (TF) FY134_06730 PF01134 Glucose inhibited division protein A FY134_06735 PF00107 Zinc-binding dehydrogenase FY134_06735 PF08240 Alcohol dehydrogenase GroES-like domain FY134_06750 PF00668 Condensation domain FY134_06750 PF00501 AMP-binding enzyme FY134_06750 PF00550 Phosphopantetheine attachment site FY134_06750 PF00975 Thioesterase domain FY134_06750 PF13193 AMP-binding enzyme C-terminal domain FY134_06755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY134_06755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY134_06765 PF00425 chorismate binding enzyme FY134_06765 PF04715 Anthranilate synthase component I, N terminal region FY134_06770 PF01702 Queuine tRNA-ribosyltransferase FY134_06775 PF02547 Queuosine biosynthesis protein FY134_06780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY134_06785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY134_06790 PF01467 Cytidylyltransferase-like FY134_06805 PF02885 Glycosyl transferase family, helical bundle domain FY134_06805 PF00591 Glycosyl transferase family, a/b domain FY134_06810 PF00218 Indole-3-glycerol phosphate synthase FY134_06815 PF01967 MoaC family FY134_06820 PF00994 Probable molybdopterin binding domain FY134_06820 PF03454 MoeA C-terminal region (domain IV) FY134_06820 PF03453 MoeA N-terminal region (domain I and II) FY134_06825 PF17158 Membrane-associated sensor, integral membrane domain FY134_06825 PF00990 Diguanylate cyclase, GGDEF domain FY134_06835 PF02254 TrkA-N domain FY134_06835 PF00999 Sodium/hydrogen exchanger family FY134_06845 PF06463 Molybdenum Cofactor Synthesis C FY134_06845 PF04055 Radical SAM superfamily FY134_06850 PF00892 EamA-like transporter family FY134_06855 PF07690 Major Facilitator Superfamily FY134_06860 PF12804 MobA-like NTP transferase domain FY134_06865 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY134_06870 PF01551 Peptidase family M23 FY134_06880 PF01975 Survival protein SurE FY134_06885 PF02403 Seryl-tRNA synthetase N-terminal domain FY134_06885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY134_06890 PF00902 Sec-independent protein translocase protein (TatC) FY134_06895 PF02416 mttA/Hcf106 family FY134_06900 PF02416 mttA/Hcf106 family FY134_06905 PF04079 Segregation and condensation complex subunit ScpB FY134_06910 PF02616 Segregation and condensation protein ScpA FY134_06915 PF00933 Glycosyl hydrolase family 3 N terminal domain FY134_06925 PF00750 tRNA synthetases class I (R) FY134_06925 PF05746 DALR anticodon binding domain FY134_06925 PF03485 Arginyl tRNA synthetase N terminal domain FY134_06930 PF13286 Phosphohydrolase-associated domain FY134_06930 PF01966 HD domain FY134_06935 PF01521 Iron-sulphur cluster biosynthesis FY134_06945 PF08238 Sel1 repeat FY134_06960 PF08264 Anticodon-binding domain of tRNA FY134_06960 PF10458 Valyl tRNA synthetase tRNA binding arm FY134_06960 PF00133 tRNA synthetases class I (I, L, M and V) FY134_07005 PF03358 NADPH-dependent FMN reductase FY134_07010 PF02464 Competence-damaged protein FY134_07010 PF18146 Damage-inducible protein CinA KH domain FY134_07010 PF00994 Probable molybdopterin binding domain FY134_07015 PF00582 Universal stress protein family FY134_07020 PF00156 Phosphoribosyl transferase domain FY134_07025 PF02867 Ribonucleotide reductase, barrel domain FY134_07025 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY134_07085 PF01026 TatD related DNase FY134_07115 PF01434 Peptidase family M41 FY134_07115 PF17862 AAA+ lid domain FY134_07115 PF00004 ATPase family associated with various cellular activities (AAA) FY134_07135 PF01566 Natural resistance-associated macrophage protein FY134_07145 PF00664 ABC transporter transmembrane region FY134_07145 PF00005 ABC transporter FY134_07150 PF01594 AI-2E family transporter FY134_07155 PF00583 Acetyltransferase (GNAT) family FY134_07170 PF01613 Flavin reductase like domain FY134_07185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY134_07185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY134_07185 PF02824 TGS domain FY134_07185 PF03129 Anticodon binding domain FY134_07195 PF01809 Putative membrane protein insertion efficiency factor FY134_07205 PF01227 GTP cyclohydrolase I FY134_07210 PF01502 Phosphoribosyl-AMP cyclohydrolase FY134_07215 PF01734 Patatin-like phospholipase FY134_07220 PF00478 IMP dehydrogenase / GMP reductase domain FY134_07220 PF00571 CBS domain FY134_07250 PF03315 Serine dehydratase beta chain FY134_07250 PF03313 Serine dehydratase alpha chain FY134_07285 PF03466 LysR substrate binding domain FY134_07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_07295 PF12833 Helix-turn-helix domain FY134_07295 PF01965 DJ-1/PfpI family FY134_07300 PF01256 Carbohydrate kinase FY134_07300 PF03853 YjeF-related protein N-terminus FY134_07310 PF00543 Nitrogen regulatory protein P-II FY134_07315 PF03951 Glutamine synthetase, beta-Grasp domain FY134_07315 PF00120 Glutamine synthetase, catalytic domain FY134_07325 PF08755 Hemimethylated DNA-binding protein YccV like FY134_07335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_07345 PF00892 EamA-like transporter family FY134_07355 PF00271 Helicase conserved C-terminal domain FY134_07355 PF03461 TRCF domain FY134_07355 PF02559 CarD-like/TRCF domain FY134_07355 PF00270 DEAD/DEAH box helicase FY134_07355 PF17757 UvrB interaction domain FY134_07365 PF00270 DEAD/DEAH box helicase FY134_07365 PF00271 Helicase conserved C-terminal domain FY134_07365 PF17191 RecG wedge domain FY134_07380 PF01850 PIN domain FY134_07395 PF01380 SIS domain FY134_07400 PF00132 Bacterial transferase hexapeptide (six repeats) FY134_07400 PF12804 MobA-like NTP transferase domain FY134_07400 PF14602 Hexapeptide repeat of succinyl-transferase FY134_07405 PF00392 Bacterial regulatory proteins, gntR family FY134_07405 PF07729 FCD domain FY134_07410 PF02608 ABC transporter substrate-binding protein PnrA-like FY134_07415 PF02653 Branched-chain amino acid transport system / permease component FY134_07420 PF02653 Branched-chain amino acid transport system / permease component FY134_07425 PF00005 ABC transporter FY134_07435 PF01494 FAD binding domain FY134_07440 PF03547 Membrane transport protein FY134_07445 PF02683 Cytochrome C biogenesis protein transmembrane region FY134_07475 PF00313 'Cold-shock' DNA-binding domain FY134_07525 PF00561 alpha/beta hydrolase fold FY134_07535 PF02687 FtsX-like permease family FY134_07535 PF00005 ABC transporter FY134_07535 PF12704 MacB-like periplasmic core domain FY134_07540 PF00005 ABC transporter FY134_07540 PF02687 FtsX-like permease family FY134_07540 PF12704 MacB-like periplasmic core domain FY134_07550 PF01521 Iron-sulphur cluster biosynthesis FY134_07555 PF01883 Iron-sulfur cluster assembly protein FY134_07560 PF00266 Aminotransferase class-V FY134_07565 PF01458 Uncharacterized protein family (UPF0051) FY134_07570 PF00005 ABC transporter FY134_07580 PF01458 Uncharacterized protein family (UPF0051) FY134_07585 PF00266 Aminotransferase class-V FY134_07590 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY134_07595 PF03702 Anhydro-N-acetylmuramic acid kinase FY134_07600 PF00579 tRNA synthetases class I (W and Y) FY134_07610 PF00578 AhpC/TSA family FY134_07615 PF04305 Protein of unknown function (DUF455) FY134_07620 PF01476 LysM domain FY134_07620 PF08525 Opacity-associated protein A N-terminal motif FY134_07620 PF01551 Peptidase family M23 FY134_07625 PF00270 DEAD/DEAH box helicase FY134_07625 PF00271 Helicase conserved C-terminal domain FY134_07645 PF00834 Ribulose-phosphate 3 epimerase family FY134_07655 PF10397 Adenylosuccinate lyase C-terminus FY134_07655 PF00206 Lyase FY134_07665 PF01259 SAICAR synthetase FY134_07670 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY134_07690 PF00155 Aminotransferase class I and II FY134_07690 PF00392 Bacterial regulatory proteins, gntR family FY134_07700 PF00586 AIR synthase related protein, N-terminal domain FY134_07700 PF02769 AIR synthase related protein, C-terminal domain FY134_07700 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY134_07720 PF00462 Glutaredoxin FY134_07725 PF07690 Major Facilitator Superfamily FY134_07730 PF00459 Inositol monophosphatase family FY134_07735 PF00459 Inositol monophosphatase family FY134_07740 PF01171 PP-loop family FY134_07745 PF04960 Glutaminase FY134_07750 PF00163 Ribosomal protein S4/S9 N-terminal domain FY134_07750 PF01479 S4 domain FY134_07755 PF03741 Integral membrane protein TerC family FY134_07765 PF00892 EamA-like transporter family FY134_07770 PF01810 LysE type translocator FY134_07780 PF01177 Asp/Glu/Hydantoin racemase FY134_07785 PF00588 SpoU rRNA Methylase family FY134_07795 PF00180 Isocitrate/isopropylmalate dehydrogenase FY134_07810 PF02272 DHHA1 domain FY134_07810 PF01411 tRNA synthetases class II (A) FY134_07810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY134_07815 PF00154 recA bacterial DNA recombination protein FY134_07820 PF00294 pfkB family carbohydrate kinase FY134_07825 PF04227 Indigoidine synthase A like protein FY134_07830 PF01389 OmpA-like transmembrane domain FY134_07830 PF00691 OmpA family FY134_07835 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_07840 PF00528 Binding-protein-dependent transport system inner membrane component FY134_07845 PF00528 Binding-protein-dependent transport system inner membrane component FY134_07850 PF06233 Usg-like family FY134_07855 PF08241 Methyltransferase domain FY134_07860 PF09084 NMT1/THI5 like FY134_07865 PF01037 Lrp/AsnC ligand binding domain FY134_07865 PF13404 AsnC-type helix-turn-helix domain FY134_07870 PF03167 Uracil DNA glycosylase superfamily FY134_07880 PF00989 PAS fold FY134_07880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_07880 PF00512 His Kinase A (phospho-acceptor) domain FY134_07885 PF01219 Prokaryotic diacylglycerol kinase FY134_07890 PF02277 Phosphoribosyltransferase FY134_07895 PF02654 Cobalamin-5-phosphate synthase FY134_07910 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY134_07925 PF00005 ABC transporter FY134_07930 PF13407 Periplasmic binding protein domain FY134_07935 PF02653 Branched-chain amino acid transport system / permease component FY134_07940 PF00456 Transketolase, thiamine diphosphate binding domain FY134_07945 PF02780 Transketolase, C-terminal domain FY134_07945 PF02779 Transketolase, pyrimidine binding domain FY134_07950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY134_07950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY134_07955 PF04198 Putative sugar-binding domain FY134_07960 PF00106 short chain dehydrogenase FY134_07965 PF01061 ABC-2 type transporter FY134_07970 PF00005 ABC transporter FY134_07990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_07990 PF08269 Cache domain FY134_08000 PF00004 ATPase family associated with various cellular activities (AAA) FY134_08000 PF16193 AAA C-terminal domain FY134_08000 PF12002 MgsA AAA+ ATPase C terminal FY134_08005 PF13180 PDZ domain FY134_08005 PF00595 PDZ domain FY134_08020 PF00920 Dehydratase family FY134_08025 PF00174 Oxidoreductase molybdopterin binding domain FY134_08030 PF01794 Ferric reductase like transmembrane component FY134_08040 PF01196 Ribosomal protein L17 FY134_08045 PF01000 RNA polymerase Rpb3/RpoA insert domain FY134_08045 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY134_08045 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY134_08050 PF00411 Ribosomal protein S11 FY134_08055 PF00416 Ribosomal protein S13/S18 FY134_08065 PF00344 SecY translocase FY134_08070 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY134_08075 PF00327 Ribosomal protein L30p/L7e FY134_08080 PF00333 Ribosomal protein S5, N-terminal domain FY134_08080 PF03719 Ribosomal protein S5, C-terminal domain FY134_08085 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY134_08090 PF00347 Ribosomal protein L6 FY134_08095 PF00410 Ribosomal protein S8 FY134_08100 PF00253 Ribosomal protein S14p/S29e FY134_08105 PF00673 ribosomal L5P family C-terminus FY134_08105 PF00281 Ribosomal protein L5 FY134_08110 PF00467 KOW motif FY134_08110 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY134_08115 PF00238 Ribosomal protein L14p/L23e FY134_08120 PF00366 Ribosomal protein S17 FY134_08125 PF00831 Ribosomal L29 protein FY134_08130 PF00252 Ribosomal protein L16p/L10e FY134_08135 PF00189 Ribosomal protein S3, C-terminal domain FY134_08135 PF07650 KH domain FY134_08140 PF00237 Ribosomal protein L22p/L17e FY134_08145 PF00203 Ribosomal protein S19 FY134_08150 PF00181 Ribosomal Proteins L2, RNA binding domain FY134_08150 PF03947 Ribosomal Proteins L2, C-terminal domain FY134_08155 PF00276 Ribosomal protein L23 FY134_08160 PF00573 Ribosomal protein L4/L1 family FY134_08165 PF00297 Ribosomal protein L3 FY134_08170 PF00338 Ribosomal protein S10p/S20e FY134_08175 PF00009 Elongation factor Tu GTP binding domain FY134_08175 PF03144 Elongation factor Tu domain 2 FY134_08175 PF03143 Elongation factor Tu C-terminal domain FY134_08180 PF03144 Elongation factor Tu domain 2 FY134_08180 PF14492 Elongation Factor G, domain II FY134_08180 PF03764 Elongation factor G, domain IV FY134_08180 PF00679 Elongation factor G C-terminus FY134_08180 PF00009 Elongation factor Tu GTP binding domain FY134_08185 PF00177 Ribosomal protein S7p/S5e FY134_08190 PF00164 Ribosomal protein S12/S23 FY134_08210 PF04983 RNA polymerase Rpb1, domain 3 FY134_08210 PF04997 RNA polymerase Rpb1, domain 1 FY134_08210 PF05000 RNA polymerase Rpb1, domain 4 FY134_08210 PF00623 RNA polymerase Rpb1, domain 2 FY134_08210 PF04998 RNA polymerase Rpb1, domain 5 FY134_08215 PF04563 RNA polymerase beta subunit FY134_08215 PF04561 RNA polymerase Rpb2, domain 2 FY134_08215 PF04565 RNA polymerase Rpb2, domain 3 FY134_08215 PF10385 RNA polymerase beta subunit external 1 domain FY134_08215 PF00562 RNA polymerase Rpb2, domain 6 FY134_08215 PF04560 RNA polymerase Rpb2, domain 7 FY134_08220 PF00542 Ribosomal protein L7/L12 C-terminal domain FY134_08220 PF16320 Ribosomal protein L7/L12 dimerisation domain FY134_08225 PF00466 Ribosomal protein L10 FY134_08230 PF00687 Ribosomal protein L1p/L10e family FY134_08235 PF03946 Ribosomal protein L11, N-terminal domain FY134_08235 PF00298 Ribosomal protein L11, RNA binding domain FY134_08240 PF00467 KOW motif FY134_08240 PF02357 Transcription termination factor nusG FY134_08245 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY134_08255 PF08485 Polysaccharide biosynthesis protein C-terminal FY134_08255 PF02719 Polysaccharide biosynthesis protein FY134_08260 PF03144 Elongation factor Tu domain 2 FY134_08260 PF00009 Elongation factor Tu GTP binding domain FY134_08260 PF03143 Elongation factor Tu C-terminal domain FY134_08265 PF03741 Integral membrane protein TerC family FY134_08275 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FY134_08305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY134_08305 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_08330 PF04542 Sigma-70 region 2 FY134_08330 PF04545 Sigma-70, region 4 FY134_08340 PF00158 Sigma-54 interaction domain FY134_08340 PF02954 Bacterial regulatory protein, Fis family FY134_08340 PF00072 Response regulator receiver domain FY134_08345 PF08769 Sporulation initiation factor Spo0A C terminal FY134_08345 PF00072 Response regulator receiver domain FY134_08350 PF01627 Hpt domain FY134_08350 PF00512 His Kinase A (phospho-acceptor) domain FY134_08350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_08350 PF00072 Response regulator receiver domain FY134_08350 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_08355 PF00072 Response regulator receiver domain FY134_08360 PF08447 PAS fold FY134_08360 PF13426 PAS domain FY134_08360 PF07536 HWE histidine kinase FY134_08365 PF00072 Response regulator receiver domain FY134_08370 PF01590 GAF domain FY134_08370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_08370 PF00512 His Kinase A (phospho-acceptor) domain FY134_08370 PF08446 PAS fold FY134_08370 PF00360 Phytochrome region FY134_08385 PF00588 SpoU rRNA Methylase family FY134_08385 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY134_08390 PF03061 Thioesterase superfamily FY134_08415 PF13460 NAD(P)H-binding FY134_08420 PF01638 HxlR-like helix-turn-helix FY134_08425 PF04851 Type III restriction enzyme, res subunit FY134_08425 PF00271 Helicase conserved C-terminal domain FY134_08425 PF02151 UvrB/uvrC motif FY134_08425 PF17757 UvrB interaction domain FY134_08425 PF12344 Ultra-violet resistance protein B FY134_08430 PF00756 Putative esterase FY134_08430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY134_08450 PF00226 DnaJ domain FY134_08450 PF01556 DnaJ C terminal domain FY134_08450 PF00684 DnaJ central domain FY134_08465 PF00990 Diguanylate cyclase, GGDEF domain FY134_08465 PF17151 Periplasmic sensor domain FY134_08475 PF00005 ABC transporter FY134_08475 PF08402 TOBE domain FY134_08485 PF01547 Bacterial extracellular solute-binding protein FY134_08490 PF00155 Aminotransferase class I and II FY134_08495 PF05025 RbsD / FucU transport protein family FY134_08500 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FY134_08510 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY134_08510 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY134_08520 PF06719 AraC-type transcriptional regulator N-terminus FY134_08520 PF12833 Helix-turn-helix domain FY134_08525 PF08240 Alcohol dehydrogenase GroES-like domain FY134_08525 PF00107 Zinc-binding dehydrogenase FY134_08530 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_08535 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY134_08540 PF00196 Bacterial regulatory proteins, luxR family FY134_08540 PF03472 Autoinducer binding domain FY134_08545 PF13538 UvrD-like helicase C-terminal domain FY134_08545 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY134_08545 PF14490 Helix-hairpin-helix containing domain FY134_08565 PF04542 Sigma-70 region 2 FY134_08565 PF08281 Sigma-70, region 4 FY134_08575 PF00248 Aldo/keto reductase family FY134_08590 PF10369 Small subunit of acetolactate synthase FY134_08595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY134_08595 PF00205 Thiamine pyrophosphate enzyme, central domain FY134_08595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY134_08615 PF13302 Acetyltransferase (GNAT) domain FY134_08625 PF13180 PDZ domain FY134_08630 PF01145 SPFH domain / Band 7 family FY134_08635 PF01145 SPFH domain / Band 7 family FY134_08640 PF00186 Dihydrofolate reductase FY134_08645 PF00303 Thymidylate synthase FY134_08680 PF02913 FAD linked oxidases, C-terminal domain FY134_08680 PF01565 FAD binding domain FY134_08685 PF00873 AcrB/AcrD/AcrF family FY134_08690 PF13533 Biotin-lipoyl like FY134_08700 PF00580 UvrD/REP helicase N-terminal domain FY134_08700 PF13361 UvrD-like helicase C-terminal domain FY134_08710 PF13977 BetI-type transcriptional repressor, C-terminal FY134_08710 PF00440 Bacterial regulatory proteins, tetR family FY134_08715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY134_08720 PF00561 alpha/beta hydrolase fold FY134_08740 PF00857 Isochorismatase family FY134_08760 PF00557 Metallopeptidase family M24 FY134_08760 PF01321 Creatinase/Prolidase N-terminal domain FY134_08770 PF02630 SCO1/SenC FY134_08780 PF01584 CheW-like domain FY134_08795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_08795 PF03466 LysR substrate binding domain FY134_08805 PF00583 Acetyltransferase (GNAT) family FY134_08815 PF12826 Helix-hairpin-helix motif FY134_08815 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY134_08815 PF00533 BRCA1 C Terminus (BRCT) domain FY134_08815 PF03120 NAD-dependent DNA ligase OB-fold domain FY134_08815 PF01653 NAD-dependent DNA ligase adenylation domain FY134_08820 PF02463 RecF/RecN/SMC N terminal domain FY134_08825 PF13525 Outer membrane lipoprotein FY134_08830 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY134_08835 PF00091 Tubulin/FtsZ family, GTPase domain FY134_08835 PF12327 FtsZ family, C-terminal domain FY134_08840 PF02491 SHS2 domain inserted in FTSA FY134_08845 PF08478 POTRA domain, FtsQ-type FY134_08845 PF03799 Cell division protein FtsQ FY134_08850 PF01820 D-ala D-ala ligase N-terminus FY134_08850 PF07478 D-ala D-ala ligase C-terminus FY134_08855 PF07690 Major Facilitator Superfamily FY134_08855 PF00083 Sugar (and other) transporter FY134_08860 PF13188 PAS domain FY134_08860 PF03707 Bacterial signalling protein N terminal repeat FY134_08860 PF00990 Diguanylate cyclase, GGDEF domain FY134_08860 PF00563 EAL domain FY134_08865 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY134_08865 PF01565 FAD binding domain FY134_08870 PF08245 Mur ligase middle domain FY134_08870 PF02875 Mur ligase family, glutamate ligase domain FY134_08870 PF01225 Mur ligase family, catalytic domain FY134_08875 PF03033 Glycosyltransferase family 28 N-terminal domain FY134_08875 PF04101 Glycosyltransferase family 28 C-terminal domain FY134_08880 PF01098 Cell cycle protein FY134_08885 PF02875 Mur ligase family, glutamate ligase domain FY134_08885 PF08245 Mur ligase middle domain FY134_08890 PF00953 Glycosyl transferase family 4 FY134_08890 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY134_08895 PF01225 Mur ligase family, catalytic domain FY134_08895 PF08245 Mur ligase middle domain FY134_08895 PF02875 Mur ligase family, glutamate ligase domain FY134_08900 PF02875 Mur ligase family, glutamate ligase domain FY134_08900 PF08245 Mur ligase middle domain FY134_08900 PF01225 Mur ligase family, catalytic domain FY134_08905 PF00905 Penicillin binding protein transpeptidase domain FY134_08905 PF03717 Penicillin-binding Protein dimerisation domain FY134_08915 PF01795 MraW methylase family FY134_08920 PF02381 MraZ protein, putative antitoxin-like FY134_08945 PF01510 N-acetylmuramoyl-L-alanine amidase FY134_08950 PF05099 Tellurite resistance protein TerB FY134_08950 PF00226 DnaJ domain FY134_08955 PF00365 Phosphofructokinase FY134_08975 PF13649 Methyltransferase domain FY134_08980 PF01183 Glycosyl hydrolases family 25 FY134_08990 PF02219 Methylenetetrahydrofolate reductase FY134_08995 PF01209 ubiE/COQ5 methyltransferase family FY134_09000 PF00005 ABC transporter FY134_09000 PF12848 ABC transporter FY134_09005 PF12146 Serine aminopeptidase, S33 FY134_09010 PF02515 CoA-transferase family III FY134_09015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY134_09015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY134_09015 PF00205 Thiamine pyrophosphate enzyme, central domain FY134_09025 PF01042 Endoribonuclease L-PSP FY134_09040 PF03734 L,D-transpeptidase catalytic domain FY134_09040 PF01476 LysM domain FY134_09045 PF07690 Major Facilitator Superfamily FY134_09055 PF10609 NUBPL iron-transfer P-loop NTPase FY134_09065 PF00465 Iron-containing alcohol dehydrogenase FY134_09070 PF00171 Aldehyde dehydrogenase family FY134_09085 PF00120 Glutamine synthetase, catalytic domain FY134_09085 PF03951 Glutamine synthetase, beta-Grasp domain FY134_09090 PF13520 Amino acid permease FY134_09100 PF01418 Helix-turn-helix domain, rpiR family FY134_09100 PF01380 SIS domain FY134_09120 PF08402 TOBE domain FY134_09120 PF00005 ABC transporter FY134_09125 PF00107 Zinc-binding dehydrogenase FY134_09125 PF08240 Alcohol dehydrogenase GroES-like domain FY134_09140 PF07690 Major Facilitator Superfamily FY134_09145 PF02607 B12 binding domain FY134_09145 PF02310 B12 binding domain FY134_09145 PF00809 Pterin binding enzyme FY134_09145 PF02574 Homocysteine S-methyltransferase FY134_09145 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY134_09165 PF13505 Outer membrane protein beta-barrel domain FY134_09180 PF04402 Protein of unknown function (DUF541) FY134_09195 PF00360 Phytochrome region FY134_09195 PF08446 PAS fold FY134_09195 PF00512 His Kinase A (phospho-acceptor) domain FY134_09195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_09195 PF01590 GAF domain FY134_09205 PF00140 Sigma-70 factor, region 1.2 FY134_09205 PF04546 Sigma-70, non-essential region FY134_09205 PF04542 Sigma-70 region 2 FY134_09205 PF04539 Sigma-70 region 3 FY134_09205 PF04545 Sigma-70, region 4 FY134_09205 PF03979 Sigma-70 factor, region 1.1 FY134_09210 PF10410 DnaB-helicase binding domain of primase FY134_09210 PF01807 CHC2 zinc finger FY134_09210 PF08275 DNA primase catalytic core, N-terminal domain FY134_09210 PF08278 DNA primase DnaG DnaB-binding FY134_09230 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY134_09230 PF00117 Glutamine amidotransferase class-I FY134_09240 PF00561 alpha/beta hydrolase fold FY134_09245 PF01554 MatE FY134_09250 PF02743 Cache domain FY134_09250 PF00672 HAMP domain FY134_09250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_09260 PF04228 Putative neutral zinc metallopeptidase FY134_09275 PF02142 MGS-like domain FY134_09275 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY134_09275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY134_09280 PF00990 Diguanylate cyclase, GGDEF domain FY134_09280 PF07694 5TMR of 5TMR-LYT FY134_09295 PF01272 Transcription elongation factor, GreA/GreB, C-term FY134_09295 PF03449 Transcription elongation factor, N-terminal FY134_09300 PF00534 Glycosyl transferases group 1 FY134_09305 PF01037 Lrp/AsnC ligand binding domain FY134_09310 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_09315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_09315 PF03466 LysR substrate binding domain FY134_09325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY134_09340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_09340 PF03466 LysR substrate binding domain FY134_09350 PF01699 Sodium/calcium exchanger protein FY134_09355 PF00155 Aminotransferase class I and II FY134_09360 PF00563 EAL domain FY134_09360 PF05231 MASE1 FY134_09375 PF00313 'Cold-shock' DNA-binding domain FY134_09380 PF00753 Metallo-beta-lactamase superfamily FY134_09390 PF12802 MarR family FY134_09395 PF00486 Transcriptional regulatory protein, C terminal FY134_09395 PF00072 Response regulator receiver domain FY134_09400 PF00512 His Kinase A (phospho-acceptor) domain FY134_09400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_09400 PF00672 HAMP domain FY134_09400 PF16527 Two-component sensor protein CpxA, periplasmic domain FY134_09405 PF01588 Putative tRNA binding domain FY134_09410 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY134_09410 PF03807 NADP oxidoreductase coenzyme F420-dependent FY134_09425 PF01790 Prolipoprotein diacylglyceryl transferase FY134_09435 PF02578 Multi-copper polyphenol oxidoreductase laccase FY134_09450 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY134_09450 PF14572 Phosphoribosyl synthetase-associated domain FY134_09460 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY134_09470 PF00535 Glycosyl transferase family 2 FY134_09475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_09475 PF00672 HAMP domain FY134_09480 PF00171 Aldehyde dehydrogenase family FY134_09485 PF02954 Bacterial regulatory protein, Fis family FY134_09490 PF03707 Bacterial signalling protein N terminal repeat FY134_09490 PF00563 EAL domain FY134_09490 PF00990 Diguanylate cyclase, GGDEF domain FY134_09490 PF13188 PAS domain FY134_09495 PF01386 Ribosomal L25p family FY134_09495 PF14693 Ribosomal protein TL5, C-terminal domain FY134_09500 PF08448 PAS fold FY134_09500 PF08447 PAS fold FY134_09500 PF00990 Diguanylate cyclase, GGDEF domain FY134_09500 PF00563 EAL domain FY134_09510 PF01195 Peptidyl-tRNA hydrolase FY134_09520 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY134_09525 PF06071 Protein of unknown function (DUF933) FY134_09525 PF01926 50S ribosome-binding GTPase FY134_09540 PF00156 Phosphoribosyl transferase domain FY134_09545 PF02167 Cytochrome C1 family FY134_09545 PF00033 Cytochrome b/b6/petB FY134_09545 PF00032 Cytochrome b(C-terminal)/b6/petD FY134_09550 PF00033 Cytochrome b/b6/petB FY134_09550 PF00032 Cytochrome b(C-terminal)/b6/petD FY134_09555 PF00355 Rieske [2Fe-2S] domain FY134_09555 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY134_09565 PF00664 ABC transporter transmembrane region FY134_09565 PF00005 ABC transporter FY134_09570 PF00664 ABC transporter transmembrane region FY134_09570 PF00005 ABC transporter FY134_09575 PF00149 Calcineurin-like phosphoesterase FY134_09580 PF00588 SpoU rRNA Methylase family FY134_09585 PF02690 Na+/Pi-cotransporter FY134_09595 PF01218 Coproporphyrinogen III oxidase FY134_09610 PF13735 tRNA nucleotidyltransferase domain 2 putative FY134_09610 PF01743 Poly A polymerase head domain FY134_09610 PF12627 Probable RNA and SrmB- binding site of polymerase A FY134_09615 PF00293 NUDIX domain FY134_09625 PF07726 ATPase family associated with various cellular activities (AAA) FY134_09625 PF17863 AAA lid domain FY134_09645 PF00583 Acetyltransferase (GNAT) family FY134_09650 PF07690 Major Facilitator Superfamily FY134_09660 PF13409 Glutathione S-transferase, N-terminal domain FY134_09665 PF00293 NUDIX domain FY134_09675 PF00682 HMGL-like FY134_09675 PF08502 LeuA allosteric (dimerisation) domain FY134_09690 PF03594 Benzoate membrane transport protein FY134_09705 PF04542 Sigma-70 region 2 FY134_09705 PF08281 Sigma-70, region 4 FY134_09715 PF00574 Clp protease FY134_09720 PF04955 HupE / UreJ protein FY134_09730 PF14489 QueF-like protein FY134_09735 PF16916 Dimerisation domain of Zinc Transporter FY134_09735 PF01545 Cation efflux family FY134_09745 PF13458 Periplasmic binding protein FY134_09755 PF01022 Bacterial regulatory protein, arsR family FY134_09760 PF00571 CBS domain FY134_09760 PF00005 ABC transporter FY134_09765 PF00528 Binding-protein-dependent transport system inner membrane component FY134_09770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY134_09775 PF00265 Thymidine kinase FY134_09780 PF00127 Copper binding proteins, plastocyanin/azurin family FY134_09790 PF03472 Autoinducer binding domain FY134_09790 PF00196 Bacterial regulatory proteins, luxR family FY134_09795 PF03350 Uncharacterized protein family, UPF0114 FY134_09800 PF07715 TonB-dependent Receptor Plug Domain FY134_09800 PF04886 PT repeat FY134_09800 PF00593 TonB dependent receptor FY134_09810 PF00117 Glutamine amidotransferase class-I FY134_09810 PF04715 Anthranilate synthase component I, N terminal region FY134_09810 PF00425 chorismate binding enzyme FY134_09820 PF11871 Domain of unknown function (DUF3391) FY134_09820 PF01966 HD domain FY134_09825 PF13382 Adenine deaminase C-terminal domain FY134_09825 PF01979 Amidohydrolase family FY134_09835 PF00583 Acetyltransferase (GNAT) family FY134_09840 PF00128 Alpha amylase, catalytic domain FY134_09845 PF00294 pfkB family carbohydrate kinase FY134_09865 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY134_09865 PF01926 50S ribosome-binding GTPase FY134_09885 PF05992 SbmA/BacA-like family FY134_09895 PF00557 Metallopeptidase family M24 FY134_09910 PF00111 2Fe-2S iron-sulfur cluster binding domain FY134_09910 PF01799 [2Fe-2S] binding domain FY134_09915 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY134_09915 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY134_09925 PF03466 LysR substrate binding domain FY134_09925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_09940 PF01979 Amidohydrolase family FY134_09955 PF01070 FMN-dependent dehydrogenase FY134_09960 PF00893 Small Multidrug Resistance protein FY134_09965 PF00440 Bacterial regulatory proteins, tetR family FY134_09965 PF17932 Tetracyclin repressor-like, C-terminal domain FY134_09970 PF00768 D-alanyl-D-alanine carboxypeptidase FY134_09970 PF07943 Penicillin-binding protein 5, C-terminal domain FY134_09980 PF00576 HIUase/Transthyretin family FY134_09985 PF04115 Ureidoglycolate lyase FY134_10000 PF01014 Uricase FY134_10000 PF09349 OHCU decarboxylase FY134_10010 PF06299 Protein of unknown function (DUF1045) FY134_10015 PF01266 FAD dependent oxidoreductase FY134_10020 PF01266 FAD dependent oxidoreductase FY134_10020 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY134_10025 PF00672 HAMP domain FY134_10025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_10025 PF00512 His Kinase A (phospho-acceptor) domain FY134_10025 PF01627 Hpt domain FY134_10025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY134_10025 PF00072 Response regulator receiver domain FY134_10030 PF00271 Helicase conserved C-terminal domain FY134_10030 PF00270 DEAD/DEAH box helicase FY134_10035 PF00892 EamA-like transporter family FY134_10040 PF07681 DoxX FY134_10045 PF01476 LysM domain FY134_10045 PF03734 L,D-transpeptidase catalytic domain FY134_10055 PF14403 Circularly permuted ATP-grasp type 2 FY134_10065 PF01841 Transglutaminase-like superfamily FY134_10065 PF08379 Bacterial transglutaminase-like N-terminal region FY134_10080 PF00583 Acetyltransferase (GNAT) family FY134_10095 PF02653 Branched-chain amino acid transport system / permease component FY134_10100 PF00005 ABC transporter FY134_10105 PF13407 Periplasmic binding protein domain FY134_10110 PF03466 LysR substrate binding domain FY134_10110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_10225 PF01757 Acyltransferase family FY134_10235 PF00672 HAMP domain FY134_10235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_10240 PF07690 Major Facilitator Superfamily FY134_10245 PF02219 Methylenetetrahydrofolate reductase FY134_10245 PF02574 Homocysteine S-methyltransferase FY134_10250 PF00528 Binding-protein-dependent transport system inner membrane component FY134_10255 PF00528 Binding-protein-dependent transport system inner membrane component FY134_10260 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_10265 PF00005 ABC transporter FY134_10280 PF00331 Glycosyl hydrolase family 10 FY134_10285 PF00535 Glycosyl transferase family 2 FY134_10300 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY134_10315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY134_10315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY134_10315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY134_10315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY134_10320 PF01152 Bacterial-like globin FY134_10340 PF08362 YcdC-like protein, C-terminal region FY134_10340 PF00440 Bacterial regulatory proteins, tetR family FY134_10345 PF07687 Peptidase dimerisation domain FY134_10345 PF01546 Peptidase family M20/M25/M40 FY134_10350 PF01979 Amidohydrolase family FY134_10355 PF00293 NUDIX domain FY134_10360 PF00005 ABC transporter FY134_10365 PF00528 Binding-protein-dependent transport system inner membrane component FY134_10370 PF00528 Binding-protein-dependent transport system inner membrane component FY134_10385 PF00873 AcrB/AcrD/AcrF family FY134_10395 PF12706 Beta-lactamase superfamily domain FY134_10395 PF00753 Metallo-beta-lactamase superfamily FY134_10400 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY134_10405 PF01730 UreF FY134_10410 PF02814 UreE urease accessory protein, N-terminal domain FY134_10410 PF05194 UreE urease accessory protein, C-terminal domain FY134_10415 PF08534 Redoxin FY134_10425 PF00449 Urease alpha-subunit, N-terminal domain FY134_10425 PF01979 Amidohydrolase family FY134_10435 PF07007 Lysozyme inhibitor LprI FY134_10445 PF00699 Urease beta subunit FY134_10450 PF06906 Protein of unknown function (DUF1272) FY134_10455 PF00547 Urease, gamma subunit FY134_10460 PF01774 UreD urease accessory protein FY134_10470 PF00005 ABC transporter FY134_10475 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY134_10475 PF00005 ABC transporter FY134_10485 PF02653 Branched-chain amino acid transport system / permease component FY134_10495 PF10931 Protein of unknown function (DUF2735) FY134_10500 PF03951 Glutamine synthetase, beta-Grasp domain FY134_10500 PF00120 Glutamine synthetase, catalytic domain FY134_10505 PF00106 short chain dehydrogenase FY134_10510 PF00072 Response regulator receiver domain FY134_10510 PF00989 PAS fold FY134_10510 PF01627 Hpt domain FY134_10510 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY134_10510 PF00512 His Kinase A (phospho-acceptor) domain FY134_10510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_10515 PF00072 Response regulator receiver domain FY134_10525 PF01522 Polysaccharide deacetylase FY134_10530 PF13458 Periplasmic binding protein FY134_10540 PF00005 ABC transporter FY134_10545 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY134_10545 PF00005 ABC transporter FY134_10550 PF02653 Branched-chain amino acid transport system / permease component FY134_10550 PF11862 Domain of unknown function (DUF3382) FY134_10555 PF02653 Branched-chain amino acid transport system / permease component FY134_10560 PF00459 Inositol monophosphatase family FY134_10590 PF00486 Transcriptional regulatory protein, C terminal FY134_10590 PF00072 Response regulator receiver domain FY134_10610 PF10090 Histidine phosphotransferase C-terminal domain FY134_10625 PF00588 SpoU rRNA Methylase family FY134_10635 PF00849 RNA pseudouridylate synthase FY134_10645 PF04542 Sigma-70 region 2 FY134_10645 PF04545 Sigma-70, region 4 FY134_10645 PF00140 Sigma-70 factor, region 1.2 FY134_10655 PF00709 Adenylosuccinate synthetase FY134_10680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY134_10690 PF03167 Uracil DNA glycosylase superfamily FY134_10695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY134_10700 PF04304 Protein of unknown function (DUF454) FY134_10705 PF00005 ABC transporter FY134_10710 PF01032 FecCD transport family FY134_10715 PF01497 Periplasmic binding protein FY134_10725 PF06228 Haem utilisation ChuX/HutX FY134_10735 PF00551 Formyl transferase FY134_10740 PF00512 His Kinase A (phospho-acceptor) domain FY134_10740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_10740 PF00672 HAMP domain FY134_10745 PF00486 Transcriptional regulatory protein, C terminal FY134_10745 PF00072 Response regulator receiver domain FY134_10755 PF03401 Tripartite tricarboxylate transporter family receptor FY134_10765 PF01970 Tripartite tricarboxylate transporter TctA family FY134_10780 PF01032 FecCD transport family FY134_10785 PF01032 FecCD transport family FY134_10790 PF00005 ABC transporter FY134_10795 PF00210 Ferritin-like domain FY134_10810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_10810 PF03466 LysR substrate binding domain FY134_10815 PF07859 alpha/beta hydrolase fold FY134_10820 PF13533 Biotin-lipoyl like FY134_10825 PF00873 AcrB/AcrD/AcrF family FY134_10840 PF13396 Phospholipase_D-nuclease N-terminal FY134_10840 PF13091 PLD-like domain FY134_10845 PF08543 Phosphomethylpyrimidine kinase FY134_10850 PF00484 Carbonic anhydrase FY134_10860 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY134_10860 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY134_10870 PF00083 Sugar (and other) transporter FY134_10875 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY134_10875 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY134_10875 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY134_10880 PF02233 NAD(P) transhydrogenase beta subunit FY134_10885 PF01613 Flavin reductase like domain FY134_10890 PF00881 Nitroreductase family FY134_10895 PF00561 alpha/beta hydrolase fold FY134_10900 PF01042 Endoribonuclease L-PSP FY134_10905 PF00857 Isochorismatase family FY134_10910 PF00296 Luciferase-like monooxygenase FY134_10915 PF01126 Heme oxygenase FY134_10920 PF00701 Dihydrodipicolinate synthetase family FY134_10925 PF07729 FCD domain FY134_10925 PF00392 Bacterial regulatory proteins, gntR family FY134_10930 PF01547 Bacterial extracellular solute-binding protein FY134_10935 PF00528 Binding-protein-dependent transport system inner membrane component FY134_10940 PF00528 Binding-protein-dependent transport system inner membrane component FY134_10945 PF00005 ABC transporter FY134_10945 PF17912 MalK OB fold domain FY134_10945 PF03459 TOBE domain FY134_10950 PF00294 pfkB family carbohydrate kinase FY134_10955 PF03576 Peptidase family S58 FY134_10960 PF01063 Amino-transferase class IV FY134_10965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_10965 PF03466 LysR substrate binding domain FY134_10975 PF00005 ABC transporter FY134_10975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_10980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_10980 PF00005 ABC transporter FY134_10985 PF00528 Binding-protein-dependent transport system inner membrane component FY134_10985 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_10990 PF00528 Binding-protein-dependent transport system inner membrane component FY134_10995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_11000 PF01244 Membrane dipeptidase (Peptidase family M19) FY134_11010 PF03706 Lysylphosphatidylglycerol synthase TM region FY134_11010 PF09924 Uncharacterised conserved protein (DUF2156) FY134_11030 PF07690 Major Facilitator Superfamily FY134_11040 PF04444 Catechol dioxygenase N terminus FY134_11040 PF00775 Dioxygenase FY134_11045 PF00465 Iron-containing alcohol dehydrogenase FY134_11050 PF04909 Amidohydrolase FY134_11055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY134_11055 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY134_11060 PF01613 Flavin reductase like domain FY134_11080 PF00512 His Kinase A (phospho-acceptor) domain FY134_11080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_11085 PF00486 Transcriptional regulatory protein, C terminal FY134_11085 PF00072 Response regulator receiver domain FY134_11095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY134_11135 PF01259 SAICAR synthetase FY134_11145 PF00529 HlyD membrane-fusion protein of T1SS FY134_11145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY134_11150 PF00873 AcrB/AcrD/AcrF family FY134_11155 PF02321 Outer membrane efflux protein FY134_11160 PF08207 Elongation factor P (EF-P) KOW-like domain FY134_11160 PF09285 Elongation factor P, C-terminal FY134_11160 PF01132 Elongation factor P (EF-P) OB domain FY134_11165 PF00152 tRNA synthetases class II (D, K and N) FY134_11170 PF12544 Lysine-2,3-aminomutase FY134_11170 PF04055 Radical SAM superfamily FY134_11185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_11185 PF03466 LysR substrate binding domain FY134_11190 PF01266 FAD dependent oxidoreductase FY134_11200 PF00528 Binding-protein-dependent transport system inner membrane component FY134_11205 PF03459 TOBE domain FY134_11205 PF00005 ABC transporter FY134_11215 PF03576 Peptidase family S58 FY134_11220 PF05690 Thiazole biosynthesis protein ThiG FY134_11230 PF01266 FAD dependent oxidoreductase FY134_11235 PF13667 ThiC-associated domain FY134_11235 PF01964 Radical SAM ThiC family FY134_11240 PF00550 Phosphopantetheine attachment site FY134_11270 PF00664 ABC transporter transmembrane region FY134_11270 PF00005 ABC transporter FY134_11275 PF13545 Crp-like helix-turn-helix domain FY134_11275 PF00027 Cyclic nucleotide-binding domain FY134_11285 PF00672 HAMP domain FY134_11285 PF00211 Adenylate and Guanylate cyclase catalytic domain FY134_11295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY134_11295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY134_11295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY134_11300 PF13439 Glycosyltransferase Family 4 FY134_11300 PF00534 Glycosyl transferases group 1 FY134_11315 PF00005 ABC transporter FY134_11315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_11320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_11325 PF00528 Binding-protein-dependent transport system inner membrane component FY134_11330 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_11330 PF00528 Binding-protein-dependent transport system inner membrane component FY134_11340 PF00534 Glycosyl transferases group 1 FY134_11340 PF13439 Glycosyltransferase Family 4 FY134_11345 PF03033 Glycosyltransferase family 28 N-terminal domain FY134_11345 PF04101 Glycosyltransferase family 28 C-terminal domain FY134_11350 PF03932 CutC family FY134_11365 PF00728 Glycosyl hydrolase family 20, catalytic domain FY134_11365 PF02838 Glycosyl hydrolase family 20, domain 2 FY134_11375 PF01380 SIS domain FY134_11375 PF01418 Helix-turn-helix domain, rpiR family FY134_11385 PF03459 TOBE domain FY134_11385 PF17912 MalK OB fold domain FY134_11385 PF00005 ABC transporter FY134_11390 PF01547 Bacterial extracellular solute-binding protein FY134_11395 PF00528 Binding-protein-dependent transport system inner membrane component FY134_11400 PF00528 Binding-protein-dependent transport system inner membrane component FY134_11410 PF07702 UTRA domain FY134_11410 PF00392 Bacterial regulatory proteins, gntR family FY134_11415 PF01380 SIS domain FY134_11420 PF01979 Amidohydrolase family FY134_11425 PF00480 ROK family FY134_11430 PF01494 FAD binding domain FY134_11435 PF01569 PAP2 superfamily FY134_11440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY134_11440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY134_11440 PF13288 DXP reductoisomerase C-terminal domain FY134_11445 PF00155 Aminotransferase class I and II FY134_11455 PF01103 Surface antigen FY134_11455 PF07244 Surface antigen variable number repeat FY134_11455 PF17243 POTRA domain TamA domain 1 FY134_11465 PF01584 CheW-like domain FY134_11470 PF13426 PAS domain FY134_11470 PF08447 PAS fold FY134_11470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_11475 PF02634 FdhD/NarQ family FY134_11480 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY134_11485 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY134_11485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY134_11490 PF00231 ATP synthase FY134_11495 PF00306 ATP synthase alpha/beta chain, C terminal domain FY134_11495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY134_11495 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY134_11500 PF00213 ATP synthase delta (OSCP) subunit FY134_11510 PF18074 Primosomal protein N C-terminal domain FY134_11510 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY134_11510 PF17764 3′ DNA-binding domain (3′BD) FY134_11510 PF00270 DEAD/DEAH box helicase FY134_11515 PF00589 Phage integrase family FY134_11515 PF02899 Phage integrase, N-terminal SAM-like domain FY134_11535 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_11535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY134_11540 PF01810 LysE type translocator FY134_11550 PF02817 e3 binding domain FY134_11550 PF00364 Biotin-requiring enzyme FY134_11550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY134_11555 PF16078 2-oxoglutarate dehydrogenase N-terminus FY134_11555 PF00676 Dehydrogenase E1 component FY134_11555 PF16870 2-oxoglutarate dehydrogenase C-terminal FY134_11555 PF02779 Transketolase, pyrimidine binding domain FY134_11560 PF00549 CoA-ligase FY134_11560 PF02629 CoA binding domain FY134_11565 PF00549 CoA-ligase FY134_11565 PF08442 ATP-grasp domain FY134_11570 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY134_11570 PF00056 lactate/malate dehydrogenase, NAD binding domain FY134_11575 PF03969 AFG1-like ATPase FY134_11580 PF02974 Protease inhibitor Inh FY134_11585 PF13085 2Fe-2S iron-sulfur cluster binding domain FY134_11585 PF13237 4Fe-4S dicluster domain FY134_11590 PF02910 Fumarate reductase flavoprotein C-term FY134_11590 PF00890 FAD binding domain FY134_11600 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY134_11625 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY134_11625 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY134_11630 PF00814 Glycoprotease family FY134_11635 PF03900 Porphobilinogen deaminase, C-terminal domain FY134_11635 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY134_11660 PF00117 Glutamine amidotransferase class-I FY134_11670 PF02325 YGGT family FY134_11675 PF02594 Uncharacterised ACR, YggU family COG1872 FY134_11680 PF00719 Inorganic pyrophosphatase FY134_11695 PF03144 Elongation factor Tu domain 2 FY134_11695 PF00679 Elongation factor G C-terminus FY134_11695 PF00009 Elongation factor Tu GTP binding domain FY134_11700 PF01432 Peptidase family M3 FY134_11705 PF01047 MarR family FY134_11710 PF07690 Major Facilitator Superfamily FY134_11715 PF00764 Arginosuccinate synthase FY134_11720 PF00106 short chain dehydrogenase FY134_11725 PF01810 LysE type translocator FY134_11730 PF00005 ABC transporter FY134_11735 PF02653 Branched-chain amino acid transport system / permease component FY134_11745 PF04055 Radical SAM superfamily FY134_11760 PF01329 Pterin 4 alpha carbinolamine dehydratase FY134_11765 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY134_11770 PF02834 LigT like Phosphoesterase FY134_11775 PF13472 GDSL-like Lipase/Acylhydrolase family FY134_11780 PF00005 ABC transporter FY134_11790 PF01027 Inhibitor of apoptosis-promoting Bax1 FY134_11805 PF00694 Aconitase C-terminal domain FY134_11805 PF00330 Aconitase family (aconitate hydratase) FY134_11810 PF00005 ABC transporter FY134_11815 PF03379 CcmB protein FY134_11820 PF01578 Cytochrome C assembly protein FY134_11830 PF08534 Redoxin FY134_11835 PF00990 Diguanylate cyclase, GGDEF domain FY134_11840 PF10755 Protein of unknown function (DUF2585) FY134_11845 PF04279 Intracellular septation protein A FY134_11850 PF00448 SRP54-type protein, GTPase domain FY134_11850 PF02881 SRP54-type protein, helical bundle domain FY134_11855 PF04055 Radical SAM superfamily FY134_11855 PF00919 Uncharacterized protein family UPF0004 FY134_11860 PF01678 Diaminopimelate epimerase FY134_11865 PF12706 Beta-lactamase superfamily domain FY134_11870 PF00448 SRP54-type protein, GTPase domain FY134_11870 PF02881 SRP54-type protein, helical bundle domain FY134_11870 PF02978 Signal peptide binding domain FY134_11875 PF01817 Chorismate mutase type II FY134_11875 PF02153 Prephenate dehydrogenase FY134_11880 PF00886 Ribosomal protein S16 FY134_11885 PF01782 RimM N-terminal domain FY134_11885 PF05239 PRC-barrel domain FY134_11890 PF01746 tRNA (Guanine-1)-methyltransferase FY134_11900 PF01245 Ribosomal protein L19 FY134_11905 PF00664 ABC transporter transmembrane region FY134_11905 PF00005 ABC transporter FY134_11910 PF00529 HlyD membrane-fusion protein of T1SS FY134_11910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY134_11920 PF07690 Major Facilitator Superfamily FY134_11925 PF00330 Aconitase family (aconitate hydratase) FY134_11930 PF01435 Peptidase family M48 FY134_11935 PF00005 ABC transporter FY134_11940 PF00528 Binding-protein-dependent transport system inner membrane component FY134_11945 PF01547 Bacterial extracellular solute-binding protein FY134_11955 PF00005 ABC transporter FY134_11955 PF16326 ABC transporter C-terminal domain FY134_11965 PF04204 Homoserine O-succinyltransferase FY134_11970 PF01263 Aldose 1-epimerase FY134_11975 PF00912 Transglycosylase FY134_11980 PF00348 Polyprenyl synthetase FY134_11985 PF13488 Glycine zipper FY134_11985 PF00691 OmpA family FY134_11990 PF04551 GcpE protein FY134_11995 PF07690 Major Facilitator Superfamily FY134_12000 PF00455 DeoR C terminal sensor domain FY134_12000 PF08220 DeoR-like helix-turn-helix domain FY134_12005 PF02436 Conserved carboxylase domain FY134_12005 PF00682 HMGL-like FY134_12005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY134_12005 PF00364 Biotin-requiring enzyme FY134_12005 PF00289 Biotin carboxylase, N-terminal domain FY134_12005 PF02785 Biotin carboxylase C-terminal domain FY134_12010 PF00196 Bacterial regulatory proteins, luxR family FY134_12010 PF00072 Response regulator receiver domain FY134_12015 PF00005 ABC transporter FY134_12015 PF00664 ABC transporter transmembrane region FY134_12025 PF10091 Putative glucoamylase FY134_12025 PF06165 Glycosyltransferase family 36 FY134_12025 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY134_12030 PF07687 Peptidase dimerisation domain FY134_12030 PF01546 Peptidase family M20/M25/M40 FY134_12035 PF01266 FAD dependent oxidoreductase FY134_12040 PF00291 Pyridoxal-phosphate dependent enzyme FY134_12045 PF00920 Dehydratase family FY134_12050 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY134_12050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY134_12055 PF01370 NAD dependent epimerase/dehydratase family FY134_12060 PF01565 FAD binding domain FY134_12060 PF02913 FAD linked oxidases, C-terminal domain FY134_12065 PF00392 Bacterial regulatory proteins, gntR family FY134_12065 PF07729 FCD domain FY134_12075 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY134_12080 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY134_12085 PF03480 Bacterial extracellular solute-binding protein, family 7 FY134_12090 PF16177 Acetyl-coenzyme A synthetase N-terminus FY134_12090 PF00501 AMP-binding enzyme FY134_12090 PF13193 AMP-binding enzyme C-terminal domain FY134_12100 PF01168 Alanine racemase, N-terminal domain FY134_12105 PF08264 Anticodon-binding domain of tRNA FY134_12105 PF00133 tRNA synthetases class I (I, L, M and V) FY134_12105 PF13603 Leucyl-tRNA synthetase, Domain 2 FY134_12120 PF00037 4Fe-4S binding domain FY134_12120 PF11953 Domain of unknown function (DUF3470) FY134_12135 PF01494 FAD binding domain FY134_12145 PF00543 Nitrogen regulatory protein P-II FY134_12150 PF00909 Ammonium Transporter Family FY134_12155 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY134_12155 PF17854 FtsK alpha domain FY134_12155 PF09397 Ftsk gamma domain FY134_12155 PF01580 FtsK/SpoIIIE family FY134_12160 PF03548 Outer membrane lipoprotein carrier protein LolA FY134_12175 PF00072 Response regulator receiver domain FY134_12175 PF00486 Transcriptional regulatory protein, C terminal FY134_12185 PF02559 CarD-like/TRCF domain FY134_12190 PF05088 Bacterial NAD-glutamate dehydrogenase FY134_12195 PF11700 Vacuole effluxer Atg22 like FY134_12200 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY134_12200 PF05233 PHB accumulation regulatory domain FY134_12205 PF00108 Thiolase, N-terminal domain FY134_12205 PF02803 Thiolase, C-terminal domain FY134_12220 PF00210 Ferritin-like domain FY134_12225 PF00293 NUDIX domain FY134_12235 PF13180 PDZ domain FY134_12235 PF03572 Peptidase family S41 FY134_12245 PF02590 Predicted SPOUT methyltransferase FY134_12255 PF01467 Cytidylyltransferase-like FY134_12260 PF00171 Aldehyde dehydrogenase family FY134_12265 PF00696 Amino acid kinase family FY134_12265 PF01472 PUA domain FY134_12270 PF01018 GTP1/OBG FY134_12270 PF01926 50S ribosome-binding GTPase FY134_12275 PF13302 Acetyltransferase (GNAT) domain FY134_12285 PF01016 Ribosomal L27 protein FY134_12290 PF00829 Ribosomal prokaryotic L21 protein FY134_12305 PF03328 HpcH/HpaI aldolase/citrate lyase family FY134_12315 PF00694 Aconitase C-terminal domain FY134_12320 PF00180 Isocitrate/isopropylmalate dehydrogenase FY134_12325 PF03150 Di-haem cytochrome c peroxidase FY134_12330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY134_12330 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY134_12335 PF10414 Sirohaem synthase dimerisation region FY134_12335 PF14824 Sirohaem biosynthesis protein central FY134_12335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY134_12340 PF01888 CbiD FY134_12345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY134_12355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY134_12360 PF02571 Precorrin-6x reductase CbiJ/CobK FY134_12365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY134_12370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY134_12375 PF02570 Precorrin-8X methylmutase FY134_12380 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY134_12385 PF02514 CobN/Magnesium Chelatase FY134_12390 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY134_12390 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY134_12400 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY134_12405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY134_12405 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY134_12410 PF03186 CobD/Cbib protein FY134_12415 PF00155 Aminotransferase class I and II FY134_12420 PF13378 Enolase C-terminal domain-like FY134_12420 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY134_12425 PF05336 L-rhamnose mutarotase FY134_12430 PF01232 Mannitol dehydrogenase Rossmann domain FY134_12430 PF08125 Mannitol dehydrogenase C-terminal domain FY134_12435 PF08240 Alcohol dehydrogenase GroES-like domain FY134_12435 PF00107 Zinc-binding dehydrogenase FY134_12445 PF00248 Aldo/keto reductase family FY134_12455 PF02653 Branched-chain amino acid transport system / permease component FY134_12460 PF00005 ABC transporter FY134_12465 PF07729 FCD domain FY134_12465 PF00392 Bacterial regulatory proteins, gntR family FY134_12470 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY134_12470 PF08666 SAF domain FY134_12475 PF02142 MGS-like domain FY134_12475 PF01808 AICARFT/IMPCHase bienzyme FY134_12485 PF01189 16S rRNA methyltransferase RsmB/F FY134_12485 PF01029 NusB family FY134_12490 PF01435 Peptidase family M48 FY134_12500 PF17762 HTH domain found in ParB protein FY134_12500 PF02195 ParB-like nuclease domain FY134_12505 PF13614 AAA domain FY134_12510 PF02527 rRNA small subunit methyltransferase G FY134_12515 PF01134 Glucose inhibited division protein A FY134_12515 PF13932 GidA associated domain FY134_12520 PF01926 50S ribosome-binding GTPase FY134_12520 PF12631 MnmE helical domain FY134_12520 PF10396 GTP-binding protein TrmE N-terminus FY134_12525 PF07497 Rho termination factor, RNA-binding domain FY134_12525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY134_12525 PF07498 Rho termination factor, N-terminal domain FY134_12530 PF03653 Uncharacterised protein family (UPF0093) FY134_12535 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY134_12540 PF03618 Kinase/pyrophosphorylase FY134_12545 PF02545 Maf-like protein FY134_12550 PF08501 Shikimate dehydrogenase substrate binding domain FY134_12550 PF01488 Shikimate / quinate 5-dehydrogenase FY134_12550 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY134_12555 PF01121 Dephospho-CoA kinase FY134_12560 PF00929 Exonuclease FY134_12565 PF02556 Preprotein translocase subunit SecB FY134_12570 PF04186 FxsA cytoplasmic membrane protein FY134_12580 PF03562 MltA specific insert domain FY134_12580 PF06725 3D domain FY134_12595 PF01751 Toprim domain FY134_12595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_12595 PF00986 DNA gyrase B subunit, carboxyl terminus FY134_12595 PF00204 DNA gyrase B FY134_12605 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY134_12620 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY134_12625 PF00291 Pyridoxal-phosphate dependent enzyme FY134_12630 PF00290 Tryptophan synthase alpha chain FY134_12635 PF01039 Carboxyl transferase domain FY134_12640 PF08245 Mur ligase middle domain FY134_12640 PF02875 Mur ligase family, glutamate ligase domain FY134_12645 PF00085 Thioredoxin FY134_12650 PF13361 UvrD-like helicase C-terminal domain FY134_12650 PF00580 UvrD/REP helicase N-terminal domain FY134_12660 PF12804 MobA-like NTP transferase domain FY134_12665 PF01636 Phosphotransferase enzyme family FY134_12670 PF00512 His Kinase A (phospho-acceptor) domain FY134_12670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_12680 PF05221 S-adenosyl-L-homocysteine hydrolase FY134_12680 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY134_12685 PF00381 PTS HPr component phosphorylation site FY134_12690 PF03610 PTS system fructose IIA component FY134_12690 PF03830 PTS system sorbose subfamily IIB component FY134_12695 PF07475 HPr Serine kinase C-terminal domain FY134_12695 PF02603 HPr Serine kinase N terminus FY134_12700 PF00672 HAMP domain FY134_12700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_12700 PF00512 His Kinase A (phospho-acceptor) domain FY134_12700 PF13755 Sensor N-terminal transmembrane domain FY134_12700 PF13756 Stimulus-sensing domain FY134_12705 PF00486 Transcriptional regulatory protein, C terminal FY134_12705 PF00072 Response regulator receiver domain FY134_12710 PF01293 Phosphoenolpyruvate carboxykinase FY134_12715 PF00472 RF-1 domain FY134_12720 PF00485 Phosphoribulokinase / Uridine kinase family FY134_12725 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY134_12730 PF00977 Histidine biosynthesis protein FY134_12735 PF00977 Histidine biosynthesis protein FY134_12740 PF00117 Glutamine amidotransferase class-I FY134_12750 PF00475 Imidazoleglycerol-phosphate dehydratase FY134_12755 PF00227 Proteasome subunit FY134_12760 PF00004 ATPase family associated with various cellular activities (AAA) FY134_12760 PF07724 AAA domain (Cdc48 subfamily) FY134_12760 PF10431 C-terminal, D2-small domain, of ClpB protein FY134_12770 PF01274 Malate synthase FY134_12785 PF00072 Response regulator receiver domain FY134_12790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_12790 PF00512 His Kinase A (phospho-acceptor) domain FY134_12795 PF00270 DEAD/DEAH box helicase FY134_12795 PF04408 Helicase associated domain (HA2) FY134_12795 PF00271 Helicase conserved C-terminal domain FY134_12795 PF08482 ATP-dependent helicase C-terminal FY134_12835 PF00270 DEAD/DEAH box helicase FY134_12835 PF00271 Helicase conserved C-terminal domain FY134_12835 PF00570 HRDC domain FY134_12835 PF16124 RecQ zinc-binding FY134_12835 PF09382 RQC domain FY134_12845 PF13407 Periplasmic binding protein domain FY134_12850 PF02653 Branched-chain amino acid transport system / permease component FY134_12855 PF00005 ABC transporter FY134_12860 PF00485 Phosphoribulokinase / Uridine kinase family FY134_12865 PF00462 Glutaredoxin FY134_12870 PF07972 NrdI Flavodoxin like FY134_12875 PF02867 Ribonucleotide reductase, barrel domain FY134_12875 PF00317 Ribonucleotide reductase, all-alpha domain FY134_12875 PF08343 Ribonucleotide reductase N-terminal FY134_12880 PF00268 Ribonucleotide reductase, small chain FY134_12890 PF02463 RecF/RecN/SMC N terminal domain FY134_12895 PF00581 Rhodanese-like domain FY134_12895 PF00899 ThiF family FY134_12910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY134_12910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY134_12920 PF00294 pfkB family carbohydrate kinase FY134_12930 PF05175 Methyltransferase small domain FY134_12930 PF08468 Methyltransferase small domain N-terminal FY134_12935 PF00013 KH domain FY134_12935 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY134_12935 PF01138 3' exoribonuclease family, domain 1 FY134_12935 PF03725 3' exoribonuclease family, domain 2 FY134_12935 PF00575 S1 RNA binding domain FY134_12940 PF00312 Ribosomal protein S15 FY134_12945 PF09157 Pseudouridine synthase II TruB, C-terminal FY134_12945 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY134_12945 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY134_12950 PF02033 Ribosome-binding factor A FY134_12955 PF08364 Bacterial translation initiation factor IF-2 associated region FY134_12955 PF11987 Translation-initiation factor 2 FY134_12955 PF03144 Elongation factor Tu domain 2 FY134_12955 PF00009 Elongation factor Tu GTP binding domain FY134_12955 PF04760 Translation initiation factor IF-2, N-terminal region FY134_12965 PF00575 S1 RNA binding domain FY134_12965 PF08529 NusA N-terminal domain FY134_12965 PF13184 NusA-like KH domain FY134_12970 PF02576 RimP N-terminal domain FY134_12970 PF17384 RimP C-terminal SH3 domain FY134_12975 PF05977 Transmembrane secretion effector FY134_12980 PF13406 Transglycosylase SLT domain FY134_12985 PF02132 RecR protein FY134_12985 PF13662 Toprim domain FY134_12995 PF02575 YbaB/EbfC DNA-binding family FY134_13000 PF12170 DNA polymerase III tau subunit V interacting with alpha FY134_13000 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY134_13000 PF12169 DNA polymerase III subunits gamma and tau domain III FY134_13015 PF00293 NUDIX domain FY134_13015 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY134_13015 PF09297 NADH pyrophosphatase zinc ribbon domain FY134_13020 PF00800 Prephenate dehydratase FY134_13020 PF01817 Chorismate mutase type II FY134_13025 PF02348 Cytidylyltransferase FY134_13030 PF00034 Cytochrome c FY134_13035 PF02397 Bacterial sugar transferase FY134_13040 PF00912 Transglycosylase FY134_13040 PF00905 Penicillin binding protein transpeptidase domain FY134_13045 PF04073 Aminoacyl-tRNA editing domain FY134_13055 PF00313 'Cold-shock' DNA-binding domain FY134_13065 PF01546 Peptidase family M20/M25/M40 FY134_13065 PF07687 Peptidase dimerisation domain FY134_13070 PF01047 MarR family FY134_13080 PF01367 5'-3' exonuclease, C-terminal SAM fold FY134_13080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY134_13080 PF00476 DNA polymerase family A FY134_13080 PF01612 3'-5' exonuclease FY134_13090 PF01783 Ribosomal L32p protein family FY134_13095 PF02743 Cache domain FY134_13095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_13095 PF00512 His Kinase A (phospho-acceptor) domain FY134_13100 PF02954 Bacterial regulatory protein, Fis family FY134_13100 PF00072 Response regulator receiver domain FY134_13100 PF00158 Sigma-54 interaction domain FY134_13105 PF03401 Tripartite tricarboxylate transporter family receptor FY134_13110 PF07331 Tripartite tricarboxylate transporter TctB family FY134_13115 PF01970 Tripartite tricarboxylate transporter TctA family FY134_13120 PF04102 SlyX FY134_13130 PF00684 DnaJ central domain FY134_13130 PF00226 DnaJ domain FY134_13130 PF01556 DnaJ C terminal domain FY134_13135 PF00012 Hsp70 protein FY134_13150 PF01625 Peptide methionine sulfoxide reductase FY134_13155 PF02608 ABC transporter substrate-binding protein PnrA-like FY134_13160 PF00005 ABC transporter FY134_13165 PF02653 Branched-chain amino acid transport system / permease component FY134_13170 PF02653 Branched-chain amino acid transport system / permease component FY134_13175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY134_13180 PF01048 Phosphorylase superfamily FY134_13185 PF01791 DeoC/LacD family aldolase FY134_13190 PF00591 Glycosyl transferase family, a/b domain FY134_13190 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY134_13190 PF02885 Glycosyl transferase family, helical bundle domain FY134_13205 PF00962 Adenosine/AMP deaminase FY134_13210 PF01676 Metalloenzyme superfamily FY134_13220 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY134_13225 PF00510 Cytochrome c oxidase subunit III FY134_13230 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY134_13235 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY134_13235 PF06481 COX Aromatic Rich Motif FY134_13240 PF07690 Major Facilitator Superfamily FY134_13240 PF00083 Sugar (and other) transporter FY134_13245 PF00310 Glutamine amidotransferases class-II FY134_13245 PF01645 Conserved region in glutamate synthase FY134_13245 PF01493 GXGXG motif FY134_13245 PF04898 Glutamate synthase central domain FY134_13250 PF00667 FAD binding domain FY134_13250 PF00258 Flavodoxin FY134_13250 PF00175 Oxidoreductase NAD-binding domain FY134_13270 PF00109 Beta-ketoacyl synthase, N-terminal domain FY134_13270 PF02801 Beta-ketoacyl synthase, C-terminal domain FY134_13275 PF07977 FabA-like domain FY134_13285 PF03458 UPF0126 domain FY134_13295 PF06912 Protein of unknown function (DUF1275) FY134_13305 PF00528 Binding-protein-dependent transport system inner membrane component FY134_13310 PF00005 ABC transporter FY134_13315 PF07702 UTRA domain FY134_13315 PF00392 Bacterial regulatory proteins, gntR family FY134_13320 PF01618 MotA/TolQ/ExbB proton channel family FY134_13325 PF02472 Biopolymer transport protein ExbD/TolR FY134_13335 PF02615 Malate/L-lactate dehydrogenase FY134_13350 PF00625 Guanylate kinase FY134_13355 PF07969 Amidohydrolase family FY134_13360 PF06299 Protein of unknown function (DUF1045) FY134_13365 PF00528 Binding-protein-dependent transport system inner membrane component FY134_13370 PF00528 Binding-protein-dependent transport system inner membrane component FY134_13380 PF00005 ABC transporter FY134_13390 PF00005 ABC transporter FY134_13395 PF00005 ABC transporter FY134_13400 PF06007 Phosphonate metabolism protein PhnJ FY134_13405 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY134_13410 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY134_13415 PF06754 Phosphonate metabolism protein PhnG FY134_13420 PF00392 Bacterial regulatory proteins, gntR family FY134_13420 PF07702 UTRA domain FY134_13425 PF05173 Dihydrodipicolinate reductase, C-terminus FY134_13425 PF01113 Dihydrodipicolinate reductase, N-terminus FY134_13430 PF02685 Glucokinase FY134_13435 PF02142 MGS-like domain FY134_13440 PF03411 Penicillin-insensitive murein endopeptidase FY134_13445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_13450 PF00528 Binding-protein-dependent transport system inner membrane component FY134_13455 PF00528 Binding-protein-dependent transport system inner membrane component FY134_13455 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_13460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_13460 PF00005 ABC transporter FY134_13465 PF01266 FAD dependent oxidoreductase FY134_13470 PF00120 Glutamine synthetase, catalytic domain FY134_13475 PF01266 FAD dependent oxidoreductase FY134_13485 PF00528 Binding-protein-dependent transport system inner membrane component FY134_13490 PF00005 ABC transporter FY134_13495 PF00528 Binding-protein-dependent transport system inner membrane component FY134_13500 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY134_13510 PF02082 Transcriptional regulator FY134_13515 PF13416 Bacterial extracellular solute-binding protein FY134_13520 PF00171 Aldehyde dehydrogenase family FY134_13530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_13530 PF03466 LysR substrate binding domain FY134_13535 PF00892 EamA-like transporter family FY134_13550 PF00877 NlpC/P60 family FY134_13560 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY134_13560 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY134_13565 PF00883 Cytosol aminopeptidase family, catalytic domain FY134_13565 PF02789 Cytosol aminopeptidase family, N-terminal domain FY134_13585 PF00437 Type II/IV secretion system protein FY134_13600 PF04972 BON domain FY134_13600 PF00263 Bacterial type II and III secretion system protein FY134_13600 PF13629 Pilus formation protein N terminal region FY134_13645 PF07411 Domain of unknown function (DUF1508) FY134_13650 PF01183 Glycosyl hydrolases family 25 FY134_13655 PF00892 EamA-like transporter family FY134_13660 PF00155 Aminotransferase class I and II FY134_13660 PF00392 Bacterial regulatory proteins, gntR family FY134_13675 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_13675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY134_13690 PF06421 GTP-binding protein LepA C-terminus FY134_13690 PF00679 Elongation factor G C-terminus FY134_13690 PF00009 Elongation factor Tu GTP binding domain FY134_13690 PF03144 Elongation factor Tu domain 2 FY134_13695 PF00795 Carbon-nitrogen hydrolase FY134_13725 PF12833 Helix-turn-helix domain FY134_13725 PF02311 AraC-like ligand binding domain FY134_13730 PF03480 Bacterial extracellular solute-binding protein, family 7 FY134_13755 PF00707 Translation initiation factor IF-3, C-terminal domain FY134_13755 PF05198 Translation initiation factor IF-3, N-terminal domain FY134_13760 PF01632 Ribosomal protein L35 FY134_13765 PF00453 Ribosomal protein L20 FY134_13775 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY134_13775 PF01409 tRNA synthetases class II core domain (F) FY134_13780 PF03483 B3/4 domain FY134_13780 PF03484 tRNA synthetase B5 domain FY134_13780 PF03147 Ferredoxin-fold anticodon binding domain FY134_13780 PF01588 Putative tRNA binding domain FY134_13780 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY134_13785 PF00248 Aldo/keto reductase family FY134_13790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_13790 PF03466 LysR substrate binding domain FY134_13800 PF00248 Aldo/keto reductase family FY134_13805 PF12833 Helix-turn-helix domain FY134_13805 PF01965 DJ-1/PfpI family FY134_13815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_13815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_13830 PF02601 Exonuclease VII, large subunit FY134_13830 PF13742 OB-fold nucleic acid binding domain FY134_13835 PF13378 Enolase C-terminal domain-like FY134_13835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY134_13840 PF07729 FCD domain FY134_13840 PF00392 Bacterial regulatory proteins, gntR family FY134_13845 PF01047 MarR family FY134_13850 PF00892 EamA-like transporter family FY134_13855 PF02073 Thermophilic metalloprotease (M29) FY134_13860 PF04073 Aminoacyl-tRNA editing domain FY134_13865 PF03960 ArsC family FY134_13875 PF00440 Bacterial regulatory proteins, tetR family FY134_13885 PF00958 GMP synthase C terminal domain FY134_13885 PF00117 Glutamine amidotransferase class-I FY134_13900 PF03073 TspO/MBR family FY134_13925 PF01189 16S rRNA methyltransferase RsmB/F FY134_13925 PF01029 NusB family FY134_13930 PF03330 Lytic transglycolase FY134_13940 PF08331 Domain of unknown function (DUF1730) FY134_13945 PF00043 Glutathione S-transferase, C-terminal domain FY134_13945 PF13417 Glutathione S-transferase, N-terminal domain FY134_13950 PF02673 Bacitracin resistance protein BacA FY134_13965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY134_13975 PF00398 Ribosomal RNA adenine dimethylase FY134_13980 PF00712 DNA polymerase III beta subunit, N-terminal domain FY134_13980 PF02768 DNA polymerase III beta subunit, C-terminal domain FY134_13980 PF02767 DNA polymerase III beta subunit, central domain FY134_13985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY134_13990 PF02021 Uncharacterised protein family UPF0102 FY134_13995 PF12464 Maltose acetyltransferase FY134_13995 PF14602 Hexapeptide repeat of succinyl-transferase FY134_14000 PF13416 Bacterial extracellular solute-binding protein FY134_14005 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14010 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14015 PF00005 ABC transporter FY134_14025 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY134_14025 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY134_14065 PF08676 MutL C terminal dimerisation domain FY134_14065 PF01119 DNA mismatch repair protein, C-terminal domain FY134_14085 PF07669 Eco57I restriction-modification methylase FY134_14090 PF04851 Type III restriction enzyme, res subunit FY134_14120 PF00004 ATPase family associated with various cellular activities (AAA) FY134_14120 PF17862 AAA+ lid domain FY134_14120 PF01434 Peptidase family M41 FY134_14135 PF00291 Pyridoxal-phosphate dependent enzyme FY134_14140 PF01810 LysE type translocator FY134_14145 PF00692 dUTPase FY134_14150 PF16658 Class II release factor RF3, C-terminal domain FY134_14150 PF00009 Elongation factor Tu GTP binding domain FY134_14150 PF03144 Elongation factor Tu domain 2 FY134_14155 PF04127 DNA / pantothenate metabolism flavoprotein FY134_14155 PF02441 Flavoprotein FY134_14170 PF03109 ABC1 family FY134_14175 PF01209 ubiE/COQ5 methyltransferase family FY134_14180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY134_14180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY134_14180 PF06827 Zinc finger found in FPG and IleRS FY134_14185 PF00378 Enoyl-CoA hydratase/isomerase FY134_14190 PF01649 Ribosomal protein S20 FY134_14235 PF00300 Histidine phosphatase superfamily (branch 1) FY134_14250 PF00392 Bacterial regulatory proteins, gntR family FY134_14250 PF07729 FCD domain FY134_14255 PF17912 MalK OB fold domain FY134_14255 PF00005 ABC transporter FY134_14260 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14265 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14270 PF01547 Bacterial extracellular solute-binding protein FY134_14290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY134_14290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY134_14300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY134_14300 PF13378 Enolase C-terminal domain-like FY134_14330 PF00072 Response regulator receiver domain FY134_14330 PF00196 Bacterial regulatory proteins, luxR family FY134_14335 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14340 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_14340 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14345 PF00005 ABC transporter FY134_14345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_14360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_14375 PF01112 Asparaginase FY134_14385 PF01266 FAD dependent oxidoreductase FY134_14390 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_14390 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14395 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_14405 PF01266 FAD dependent oxidoreductase FY134_14410 PF00300 Histidine phosphatase superfamily (branch 1) FY134_14410 PF00106 short chain dehydrogenase FY134_14420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_14420 PF00005 ABC transporter FY134_14435 PF07238 PilZ domain FY134_14435 PF00535 Glycosyl transferase family 2 FY134_14435 PF03552 Cellulose synthase FY134_14445 PF00999 Sodium/hydrogen exchanger family FY134_14450 PF06472 ABC transporter transmembrane region 2 FY134_14450 PF00005 ABC transporter FY134_14455 PF00990 Diguanylate cyclase, GGDEF domain FY134_14460 PF00356 Bacterial regulatory proteins, lacI family FY134_14470 PF00005 ABC transporter FY134_14475 PF02653 Branched-chain amino acid transport system / permease component FY134_14480 PF02126 Phosphotriesterase family FY134_14490 PF00294 pfkB family carbohydrate kinase FY134_14500 PF01546 Peptidase family M20/M25/M40 FY134_14500 PF07687 Peptidase dimerisation domain FY134_14510 PF00975 Thioesterase domain FY134_14510 PF00668 Condensation domain FY134_14510 PF13193 AMP-binding enzyme C-terminal domain FY134_14510 PF00501 AMP-binding enzyme FY134_14510 PF00550 Phosphopantetheine attachment site FY134_14515 PF01177 Asp/Glu/Hydantoin racemase FY134_14525 PF00440 Bacterial regulatory proteins, tetR family FY134_14530 PF00860 Permease family FY134_14535 PF00144 Beta-lactamase FY134_14540 PF03466 LysR substrate binding domain FY134_14540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_14570 PF04542 Sigma-70 region 2 FY134_14570 PF08281 Sigma-70, region 4 FY134_14575 PF01177 Asp/Glu/Hydantoin racemase FY134_14580 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14585 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14595 PF00005 ABC transporter FY134_14595 PF08402 TOBE domain FY134_14620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_14620 PF08447 PAS fold FY134_14620 PF13426 PAS domain FY134_14630 PF13416 Bacterial extracellular solute-binding protein FY134_14635 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14640 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14645 PF00005 ABC transporter FY134_14645 PF17912 MalK OB fold domain FY134_14650 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14655 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14665 PF00005 ABC transporter FY134_14665 PF17912 MalK OB fold domain FY134_14670 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY134_14685 PF00356 Bacterial regulatory proteins, lacI family FY134_14695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY134_14695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY134_14700 PF01261 Xylose isomerase-like TIM barrel FY134_14705 PF03459 TOBE domain FY134_14705 PF17912 MalK OB fold domain FY134_14705 PF00005 ABC transporter FY134_14710 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14715 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14720 PF13416 Bacterial extracellular solute-binding protein FY134_14725 PF17938 Tetracyclin repressor-like, C-terminal domain FY134_14725 PF00440 Bacterial regulatory proteins, tetR family FY134_14730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_14730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_14745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_14745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_14750 PF00313 'Cold-shock' DNA-binding domain FY134_14760 PF01165 Ribosomal protein S21 FY134_14780 PF07470 Glycosyl Hydrolase Family 88 FY134_14785 PF00295 Glycosyl hydrolases family 28 FY134_14795 PF00005 ABC transporter FY134_14795 PF08402 TOBE domain FY134_14800 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14805 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14810 PF02311 AraC-like ligand binding domain FY134_14810 PF12833 Helix-turn-helix domain FY134_14815 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY134_14825 PF03480 Bacterial extracellular solute-binding protein, family 7 FY134_14830 PF04909 Amidohydrolase FY134_14835 PF13378 Enolase C-terminal domain-like FY134_14835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY134_14840 PF00701 Dihydrodipicolinate synthetase family FY134_14850 PF04962 KduI/IolB family FY134_14855 PF01370 NAD dependent epimerase/dehydratase family FY134_14860 PF07729 FCD domain FY134_14860 PF00392 Bacterial regulatory proteins, gntR family FY134_14870 PF00557 Metallopeptidase family M24 FY134_14870 PF01321 Creatinase/Prolidase N-terminal domain FY134_14875 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_14875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_14880 PF17912 MalK OB fold domain FY134_14880 PF00005 ABC transporter FY134_14885 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14890 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14895 PF13416 Bacterial extracellular solute-binding protein FY134_14905 PF02311 AraC-like ligand binding domain FY134_14905 PF12833 Helix-turn-helix domain FY134_14910 PF07690 Major Facilitator Superfamily FY134_14915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_14915 PF03466 LysR substrate binding domain FY134_14920 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY134_14930 PF03480 Bacterial extracellular solute-binding protein, family 7 FY134_14950 PF00356 Bacterial regulatory proteins, lacI family FY134_14955 PF08240 Alcohol dehydrogenase GroES-like domain FY134_14955 PF16912 Glucose dehydrogenase C-terminus FY134_14970 PF00294 pfkB family carbohydrate kinase FY134_14975 PF08013 Tagatose 6 phosphate kinase FY134_14980 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14985 PF00528 Binding-protein-dependent transport system inner membrane component FY134_14990 PF00005 ABC transporter FY134_14990 PF08402 TOBE domain FY134_14995 PF17912 MalK OB fold domain FY134_14995 PF00005 ABC transporter FY134_15000 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15005 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15010 PF01547 Bacterial extracellular solute-binding protein FY134_15015 PF01053 Cys/Met metabolism PLP-dependent enzyme FY134_15025 PF00075 RNase H FY134_15030 PF01297 Zinc-uptake complex component A periplasmic FY134_15035 PF00950 ABC 3 transport family FY134_15040 PF00005 ABC transporter FY134_15045 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY134_15045 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY134_15060 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY134_15060 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY134_15065 PF13416 Bacterial extracellular solute-binding protein FY134_15070 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15075 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15080 PF00005 ABC transporter FY134_15080 PF08402 TOBE domain FY134_15095 PF03922 OmpW family FY134_15115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY134_15115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY134_15120 PF03466 LysR substrate binding domain FY134_15120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_15125 PF13407 Periplasmic binding protein domain FY134_15130 PF02653 Branched-chain amino acid transport system / permease component FY134_15135 PF00005 ABC transporter FY134_15140 PF08361 MAATS-type transcriptional repressor, C-terminal region FY134_15140 PF00440 Bacterial regulatory proteins, tetR family FY134_15145 PF00873 AcrB/AcrD/AcrF family FY134_15150 PF00529 HlyD membrane-fusion protein of T1SS FY134_15150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY134_15155 PF13426 PAS domain FY134_15155 PF08448 PAS fold FY134_15155 PF05231 MASE1 FY134_15155 PF00563 EAL domain FY134_15155 PF00990 Diguanylate cyclase, GGDEF domain FY134_15155 PF08447 PAS fold FY134_15160 PF07883 Cupin domain FY134_15160 PF05899 Protein of unknown function (DUF861) FY134_15170 PF00990 Diguanylate cyclase, GGDEF domain FY134_15170 PF08447 PAS fold FY134_15170 PF00563 EAL domain FY134_15170 PF08448 PAS fold FY134_15175 PF02615 Malate/L-lactate dehydrogenase FY134_15180 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY134_15180 PF17854 FtsK alpha domain FY134_15180 PF09397 Ftsk gamma domain FY134_15180 PF01580 FtsK/SpoIIIE family FY134_15185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_15190 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15195 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15200 PF00005 ABC transporter FY134_15200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_15205 PF00005 ABC transporter FY134_15205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_15210 PF00266 Aminotransferase class-V FY134_15220 PF00920 Dehydratase family FY134_15225 PF13407 Periplasmic binding protein domain FY134_15230 PF00005 ABC transporter FY134_15235 PF02653 Branched-chain amino acid transport system / permease component FY134_15240 PF02653 Branched-chain amino acid transport system / permease component FY134_15245 PF00392 Bacterial regulatory proteins, gntR family FY134_15245 PF07729 FCD domain FY134_15255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY134_15255 PF14579 Helix-hairpin-helix motif FY134_15255 PF02811 PHP domain FY134_15255 PF01336 OB-fold nucleic acid binding domain FY134_15255 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY134_15275 PF05161 MOFRL family FY134_15275 PF13660 Domain of unknown function (DUF4147) FY134_15285 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_15285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_15295 PF17912 MalK OB fold domain FY134_15295 PF03459 TOBE domain FY134_15295 PF00005 ABC transporter FY134_15300 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15305 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15310 PF01547 Bacterial extracellular solute-binding protein FY134_15320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_15330 PF01425 Amidase FY134_15335 PF08448 PAS fold FY134_15335 PF00990 Diguanylate cyclase, GGDEF domain FY134_15335 PF08447 PAS fold FY134_15335 PF00563 EAL domain FY134_15340 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_15350 PF03776 Septum formation topological specificity factor MinE FY134_15355 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY134_15360 PF03775 Septum formation inhibitor MinC, C-terminal domain FY134_15360 PF05209 Septum formation inhibitor MinC, N-terminal domain FY134_15365 PF13419 Haloacid dehalogenase-like hydrolase FY134_15370 PF00392 Bacterial regulatory proteins, gntR family FY134_15370 PF07729 FCD domain FY134_15375 PF03480 Bacterial extracellular solute-binding protein, family 7 FY134_15385 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY134_15390 PF00107 Zinc-binding dehydrogenase FY134_15390 PF08240 Alcohol dehydrogenase GroES-like domain FY134_15395 PF03786 D-mannonate dehydratase (UxuA) FY134_15405 PF00171 Aldehyde dehydrogenase family FY134_15410 PF03480 Bacterial extracellular solute-binding protein, family 7 FY134_15415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY134_15415 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY134_15420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_15420 PF00005 ABC transporter FY134_15425 PF03841 L-seryl-tRNA selenium transferase FY134_15440 PF01979 Amidohydrolase family FY134_15445 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_15445 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15450 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_15460 PF00534 Glycosyl transferases group 1 FY134_15460 PF13439 Glycosyltransferase Family 4 FY134_15465 PF02563 Polysaccharide biosynthesis/export protein FY134_15475 PF00873 AcrB/AcrD/AcrF family FY134_15485 PF12951 Passenger-associated-transport-repeat FY134_15490 PF01613 Flavin reductase like domain FY134_15495 PF00248 Aldo/keto reductase family FY134_15500 PF00296 Luciferase-like monooxygenase FY134_15510 PF00005 ABC transporter FY134_15510 PF08402 TOBE domain FY134_15515 PF01547 Bacterial extracellular solute-binding protein FY134_15520 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15525 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15530 PF01055 Glycosyl hydrolases family 31 FY134_15535 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15540 PF09084 NMT1/THI5 like FY134_15545 PF02110 Hydroxyethylthiazole kinase family FY134_15550 PF02581 Thiamine monophosphate synthase FY134_15555 PF08543 Phosphomethylpyrimidine kinase FY134_15560 PF01037 Lrp/AsnC ligand binding domain FY134_15565 PF01168 Alanine racemase, N-terminal domain FY134_15565 PF00842 Alanine racemase, C-terminal domain FY134_15570 PF01266 FAD dependent oxidoreductase FY134_15585 PF02954 Bacterial regulatory protein, Fis family FY134_15585 PF00072 Response regulator receiver domain FY134_15585 PF00158 Sigma-54 interaction domain FY134_15590 PF00512 His Kinase A (phospho-acceptor) domain FY134_15590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_15590 PF02743 Cache domain FY134_15595 PF00375 Sodium:dicarboxylate symporter family FY134_15600 PF00892 EamA-like transporter family FY134_15605 PF00202 Aminotransferase class-III FY134_15620 PF07687 Peptidase dimerisation domain FY134_15620 PF01546 Peptidase family M20/M25/M40 FY134_15630 PF01270 Glycosyl hydrolases family 8 FY134_15640 PF03552 Cellulose synthase FY134_15640 PF00535 Glycosyl transferase family 2 FY134_15640 PF07238 PilZ domain FY134_15670 PF16363 GDP-mannose 4,6 dehydratase FY134_15675 PF16363 GDP-mannose 4,6 dehydratase FY134_15685 PF00196 Bacterial regulatory proteins, luxR family FY134_15685 PF00072 Response regulator receiver domain FY134_15700 PF00005 ABC transporter FY134_15700 PF00664 ABC transporter transmembrane region FY134_15705 PF00529 HlyD membrane-fusion protein of T1SS FY134_15720 PF02563 Polysaccharide biosynthesis/export protein FY134_15725 PF02397 Bacterial sugar transferase FY134_15740 PF00202 Aminotransferase class-III FY134_15745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_15745 PF00672 HAMP domain FY134_15750 PF17969 L,D-transpeptidase C-terminal domain FY134_15750 PF01476 LysM domain FY134_15750 PF03734 L,D-transpeptidase catalytic domain FY134_15770 PF02245 Methylpurine-DNA glycosylase (MPG) FY134_15780 PF00356 Bacterial regulatory proteins, lacI family FY134_15785 PF01547 Bacterial extracellular solute-binding protein FY134_15790 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15795 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15800 PF17912 MalK OB fold domain FY134_15800 PF00005 ABC transporter FY134_15800 PF03459 TOBE domain FY134_15810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_15810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_15815 PF04055 Radical SAM superfamily FY134_15820 PF01242 6-pyruvoyl tetrahydropterin synthase FY134_15825 PF06508 Queuosine biosynthesis protein QueC FY134_15830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_15830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_15840 PF00005 ABC transporter FY134_15840 PF17912 MalK OB fold domain FY134_15845 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15850 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15855 PF01547 Bacterial extracellular solute-binding protein FY134_15860 PF01050 Mannose-6-phosphate isomerase FY134_15860 PF00483 Nucleotidyl transferase FY134_15865 PF01011 PQQ enzyme repeat FY134_15870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_15870 PF03466 LysR substrate binding domain FY134_15875 PF00390 Malic enzyme, N-terminal domain FY134_15875 PF01515 Phosphate acetyl/butaryl transferase FY134_15875 PF03949 Malic enzyme, NAD binding domain FY134_15880 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_15885 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15890 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15895 PF00005 ABC transporter FY134_15900 PF03972 MmgE/PrpD family FY134_15905 PF00296 Luciferase-like monooxygenase FY134_15910 PF13426 PAS domain FY134_15910 PF08447 PAS fold FY134_15910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_15915 PF01266 FAD dependent oxidoreductase FY134_15930 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY134_15935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY134_15940 PF03480 Bacterial extracellular solute-binding protein, family 7 FY134_15945 PF07722 Peptidase C26 FY134_15950 PF02653 Branched-chain amino acid transport system / permease component FY134_15955 PF00005 ABC transporter FY134_15960 PF13407 Periplasmic binding protein domain FY134_15970 PF01546 Peptidase family M20/M25/M40 FY134_15975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_15985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_15985 PF00005 ABC transporter FY134_15990 PF00528 Binding-protein-dependent transport system inner membrane component FY134_15990 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_15995 PF00528 Binding-protein-dependent transport system inner membrane component FY134_16000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_16000 PF03466 LysR substrate binding domain FY134_16005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY134_16005 PF00529 HlyD membrane-fusion protein of T1SS FY134_16010 PF00664 ABC transporter transmembrane region FY134_16010 PF00005 ABC transporter FY134_16030 PF04542 Sigma-70 region 2 FY134_16030 PF12680 SnoaL-like domain FY134_16030 PF08281 Sigma-70, region 4 FY134_16035 PF00005 ABC transporter FY134_16040 PF01032 FecCD transport family FY134_16055 PF01209 ubiE/COQ5 methyltransferase family FY134_16060 PF00127 Copper binding proteins, plastocyanin/azurin family FY134_16065 PF00005 ABC transporter FY134_16070 PF01032 FecCD transport family FY134_16085 PF01546 Peptidase family M20/M25/M40 FY134_16085 PF07687 Peptidase dimerisation domain FY134_16090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY134_16100 PF00171 Aldehyde dehydrogenase family FY134_16105 PF00180 Isocitrate/isopropylmalate dehydrogenase FY134_16110 PF00171 Aldehyde dehydrogenase family FY134_16115 PF01266 FAD dependent oxidoreductase FY134_16130 PF00202 Aminotransferase class-III FY134_16140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_16145 PF00528 Binding-protein-dependent transport system inner membrane component FY134_16150 PF00528 Binding-protein-dependent transport system inner membrane component FY134_16150 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_16155 PF00005 ABC transporter FY134_16155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_16160 PF01037 Lrp/AsnC ligand binding domain FY134_16165 PF01266 FAD dependent oxidoreductase FY134_16175 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_16180 PF00005 ABC transporter FY134_16190 PF07687 Peptidase dimerisation domain FY134_16190 PF01546 Peptidase family M20/M25/M40 FY134_16195 PF00296 Luciferase-like monooxygenase FY134_16200 PF00296 Luciferase-like monooxygenase FY134_16205 PF02082 Transcriptional regulator FY134_16215 PF01613 Flavin reductase like domain FY134_16220 PF00296 Luciferase-like monooxygenase FY134_16235 PF00296 Luciferase-like monooxygenase FY134_16240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY134_16240 PF02770 Acyl-CoA dehydrogenase, middle domain FY134_16240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY134_16250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_16255 PF00528 Binding-protein-dependent transport system inner membrane component FY134_16260 PF00528 Binding-protein-dependent transport system inner membrane component FY134_16265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_16265 PF00005 ABC transporter FY134_16270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_16270 PF00005 ABC transporter FY134_16275 PF00248 Aldo/keto reductase family FY134_16280 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY134_16280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY134_16285 PF03466 LysR substrate binding domain FY134_16285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_16290 PF00296 Luciferase-like monooxygenase FY134_16305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_16310 PF07687 Peptidase dimerisation domain FY134_16310 PF01546 Peptidase family M20/M25/M40 FY134_16315 PF00296 Luciferase-like monooxygenase FY134_16320 PF05368 NmrA-like family FY134_16330 PF00296 Luciferase-like monooxygenase FY134_16335 PF00296 Luciferase-like monooxygenase FY134_16340 PF13378 Enolase C-terminal domain-like FY134_16340 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY134_16350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_16355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_16355 PF00005 ABC transporter FY134_16360 PF00005 ABC transporter FY134_16360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_16365 PF00528 Binding-protein-dependent transport system inner membrane component FY134_16365 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_16370 PF00528 Binding-protein-dependent transport system inner membrane component FY134_16380 PF00392 Bacterial regulatory proteins, gntR family FY134_16380 PF07729 FCD domain FY134_16390 PF00561 alpha/beta hydrolase fold FY134_16405 PF04273 Putative phosphatase (DUF442) FY134_16405 PF00753 Metallo-beta-lactamase superfamily FY134_16415 PF04143 Sulphur transport FY134_16425 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY134_16425 PF01676 Metalloenzyme superfamily FY134_16430 PF00364 Biotin-requiring enzyme FY134_16430 PF02817 e3 binding domain FY134_16430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY134_16435 PF02779 Transketolase, pyrimidine binding domain FY134_16435 PF02780 Transketolase, C-terminal domain FY134_16440 PF00676 Dehydrogenase E1 component FY134_16440 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY134_16445 PF02770 Acyl-CoA dehydrogenase, middle domain FY134_16445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY134_16445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY134_16450 PF00108 Thiolase, N-terminal domain FY134_16450 PF02803 Thiolase, C-terminal domain FY134_16455 PF01037 Lrp/AsnC ligand binding domain FY134_16460 PF02770 Acyl-CoA dehydrogenase, middle domain FY134_16460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY134_16460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY134_16465 PF01039 Carboxyl transferase domain FY134_16470 PF02785 Biotin carboxylase C-terminal domain FY134_16470 PF00289 Biotin carboxylase, N-terminal domain FY134_16470 PF00364 Biotin-requiring enzyme FY134_16470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY134_16475 PF00682 HMGL-like FY134_16480 PF00378 Enoyl-CoA hydratase/isomerase FY134_16485 PF02569 Pantoate-beta-alanine ligase FY134_16490 PF02548 Ketopantoate hydroxymethyltransferase FY134_16495 PF01261 Xylose isomerase-like TIM barrel FY134_16500 PF00596 Class II Aldolase and Adducin N-terminal domain FY134_16505 PF08220 DeoR-like helix-turn-helix domain FY134_16505 PF00455 DeoR C terminal sensor domain FY134_16510 PF13407 Periplasmic binding protein domain FY134_16515 PF00005 ABC transporter FY134_16520 PF02653 Branched-chain amino acid transport system / permease component FY134_16525 PF02653 Branched-chain amino acid transport system / permease component FY134_16530 PF05336 L-rhamnose mutarotase FY134_16540 PF00561 alpha/beta hydrolase fold FY134_16550 PF08447 PAS fold FY134_16550 PF00563 EAL domain FY134_16550 PF00990 Diguanylate cyclase, GGDEF domain FY134_16550 PF08448 PAS fold FY134_16560 PF00171 Aldehyde dehydrogenase family FY134_16565 PF08713 DNA alkylation repair enzyme FY134_16570 PF00005 ABC transporter FY134_16575 PF00528 Binding-protein-dependent transport system inner membrane component FY134_16580 PF00528 Binding-protein-dependent transport system inner membrane component FY134_16590 PF00378 Enoyl-CoA hydratase/isomerase FY134_16605 PF08241 Methyltransferase domain FY134_16615 PF00795 Carbon-nitrogen hydrolase FY134_16620 PF00462 Glutaredoxin FY134_16630 PF08241 Methyltransferase domain FY134_16645 PF00293 NUDIX domain FY134_16650 PF00583 Acetyltransferase (GNAT) family FY134_16650 PF13508 Acetyltransferase (GNAT) domain FY134_16655 PF01960 ArgJ family FY134_16665 PF07517 SecA DEAD-like domain FY134_16665 PF02810 SEC-C motif FY134_16665 PF07516 SecA Wing and Scaffold domain FY134_16665 PF01043 SecA preprotein cross-linking domain FY134_16675 PF01757 Acyltransferase family FY134_16705 PF00248 Aldo/keto reductase family FY134_16710 PF03786 D-mannonate dehydratase (UxuA) FY134_16715 PF01232 Mannitol dehydrogenase Rossmann domain FY134_16715 PF08125 Mannitol dehydrogenase C-terminal domain FY134_16720 PF00106 short chain dehydrogenase FY134_16725 PF07729 FCD domain FY134_16725 PF00392 Bacterial regulatory proteins, gntR family FY134_16735 PF02653 Branched-chain amino acid transport system / permease component FY134_16740 PF02653 Branched-chain amino acid transport system / permease component FY134_16745 PF00005 ABC transporter FY134_16770 PF00149 Calcineurin-like phosphoesterase FY134_16775 PF02733 Dak1 domain FY134_16775 PF02734 DAK2 domain FY134_16780 PF03600 Citrate transporter FY134_16780 PF02080 TrkA-C domain FY134_16800 PF13439 Glycosyltransferase Family 4 FY134_16810 PF01943 Polysaccharide biosynthesis protein FY134_16815 PF00534 Glycosyl transferases group 1 FY134_16815 PF13579 Glycosyl transferase 4-like domain FY134_16830 PF01757 Acyltransferase family FY134_16840 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY134_16840 PF13807 G-rich domain on putative tyrosine kinase FY134_16840 PF02706 Chain length determinant protein FY134_16860 PF00534 Glycosyl transferases group 1 FY134_16860 PF13439 Glycosyltransferase Family 4 FY134_16865 PF13439 Glycosyltransferase Family 4 FY134_16865 PF00534 Glycosyl transferases group 1 FY134_16880 PF01272 Transcription elongation factor, GreA/GreB, C-term FY134_16880 PF03449 Transcription elongation factor, N-terminal FY134_16885 PF00722 Glycosyl hydrolases family 16 FY134_16885 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY134_16915 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY134_16930 PF01381 Helix-turn-helix FY134_16940 PF00005 ABC transporter FY134_16945 PF02653 Branched-chain amino acid transport system / permease component FY134_16950 PF13407 Periplasmic binding protein domain FY134_16960 PF01266 FAD dependent oxidoreductase FY134_16960 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY134_16970 PF02310 B12 binding domain FY134_16970 PF01642 Methylmalonyl-CoA mutase FY134_16975 PF02785 Biotin carboxylase C-terminal domain FY134_16975 PF00289 Biotin carboxylase, N-terminal domain FY134_16975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY134_16975 PF18140 Propionyl-coenzyme A carboxylase BT domain FY134_16975 PF00364 Biotin-requiring enzyme FY134_16985 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FY134_16995 PF02798 Glutathione S-transferase, N-terminal domain FY134_17000 PF01039 Carboxyl transferase domain FY134_17005 PF01381 Helix-turn-helix FY134_17005 PF09856 Predicted transcriptional regulator (DUF2083) FY134_17005 PF06114 IrrE N-terminal-like domain FY134_17010 PF12833 Helix-turn-helix domain FY134_17010 PF06029 AlkA N-terminal domain FY134_17010 PF02805 Metal binding domain of Ada FY134_17010 PF00730 HhH-GPD superfamily base excision DNA repair protein FY134_17015 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY134_17025 PF00106 short chain dehydrogenase FY134_17035 PF01923 Cobalamin adenosyltransferase FY134_17045 PF01012 Electron transfer flavoprotein domain FY134_17050 PF00766 Electron transfer flavoprotein FAD-binding domain FY134_17050 PF01012 Electron transfer flavoprotein domain FY134_17055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY134_17055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY134_17060 PF08534 Redoxin FY134_17065 PF14698 Argininosuccinate lyase C-terminal FY134_17065 PF00206 Lyase FY134_17075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY134_17075 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY134_17085 PF00072 Response regulator receiver domain FY134_17090 PF00156 Phosphoribosyl transferase domain FY134_17100 PF00005 ABC transporter FY134_17120 PF04752 ChaC-like protein FY134_17130 PF02153 Prephenate dehydrogenase FY134_17135 PF00155 Aminotransferase class I and II FY134_17140 PF01209 ubiE/COQ5 methyltransferase family FY134_17145 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY134_17145 PF00753 Metallo-beta-lactamase superfamily FY134_17165 PF00830 Ribosomal L28 family FY134_17170 PF02592 Putative vitamin uptake transporter FY134_17180 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY134_17180 PF06213 Cobalamin biosynthesis protein CobT FY134_17185 PF07728 AAA domain (dynein-related subfamily) FY134_17185 PF08406 CbbQ/NirQ/NorQ C-terminal FY134_17185 PF12556 Cobaltochelatase CobS subunit N terminal FY134_17190 PF00226 DnaJ domain FY134_17195 PF01722 BolA-like protein FY134_17200 PF01761 3-dehydroquinate synthase FY134_17205 PF01202 Shikimate kinase FY134_17215 PF02899 Phage integrase, N-terminal SAM-like domain FY134_17215 PF00589 Phage integrase family FY134_17220 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY134_17225 PF03734 L,D-transpeptidase catalytic domain FY134_17230 PF01206 Sulfurtransferase TusA FY134_17230 PF00581 Rhodanese-like domain FY134_17235 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY134_17235 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY134_17240 PF00768 D-alanyl-D-alanine carboxypeptidase FY134_17240 PF07943 Penicillin-binding protein 5, C-terminal domain FY134_17245 PF07687 Peptidase dimerisation domain FY134_17245 PF01546 Peptidase family M20/M25/M40 FY134_17250 PF02082 Transcriptional regulator FY134_17255 PF02261 Aspartate decarboxylase FY134_17270 PF00501 AMP-binding enzyme FY134_17270 PF00550 Phosphopantetheine attachment site FY134_17270 PF07993 Male sterility protein FY134_17270 PF00668 Condensation domain FY134_17270 PF13193 AMP-binding enzyme C-terminal domain FY134_17280 PF00668 Condensation domain FY134_17280 PF16197 Ketoacyl-synthetase C-terminal extension FY134_17280 PF00109 Beta-ketoacyl synthase, N-terminal domain FY134_17280 PF02801 Beta-ketoacyl synthase, C-terminal domain FY134_17280 PF00550 Phosphopantetheine attachment site FY134_17280 PF00698 Acyl transferase domain FY134_17285 PF00501 AMP-binding enzyme FY134_17290 PF00550 Phosphopantetheine attachment site FY134_17290 PF00501 AMP-binding enzyme FY134_17290 PF13193 AMP-binding enzyme C-terminal domain FY134_17290 PF00668 Condensation domain FY134_17290 PF07993 Male sterility protein FY134_17295 PF13649 Methyltransferase domain FY134_17300 PF00501 AMP-binding enzyme FY134_17300 PF13193 AMP-binding enzyme C-terminal domain FY134_17300 PF00668 Condensation domain FY134_17300 PF16197 Ketoacyl-synthetase C-terminal extension FY134_17300 PF00109 Beta-ketoacyl synthase, N-terminal domain FY134_17300 PF00550 Phosphopantetheine attachment site FY134_17300 PF00202 Aminotransferase class-III FY134_17300 PF02801 Beta-ketoacyl synthase, C-terminal domain FY134_17320 PF00550 Phosphopantetheine attachment site FY134_17320 PF02801 Beta-ketoacyl synthase, C-terminal domain FY134_17320 PF00109 Beta-ketoacyl synthase, N-terminal domain FY134_17320 PF16197 Ketoacyl-synthetase C-terminal extension FY134_17320 PF00668 Condensation domain FY134_17320 PF00698 Acyl transferase domain FY134_17325 PF00550 Phosphopantetheine attachment site FY134_17325 PF00668 Condensation domain FY134_17325 PF13193 AMP-binding enzyme C-terminal domain FY134_17325 PF00501 AMP-binding enzyme FY134_17330 PF00668 Condensation domain FY134_17330 PF00501 AMP-binding enzyme FY134_17330 PF00550 Phosphopantetheine attachment site FY134_17330 PF13193 AMP-binding enzyme C-terminal domain FY134_17335 PF00668 Condensation domain FY134_17335 PF07993 Male sterility protein FY134_17335 PF13193 AMP-binding enzyme C-terminal domain FY134_17335 PF00550 Phosphopantetheine attachment site FY134_17335 PF07993 Male sterility protein FY134_17335 PF00668 Condensation domain FY134_17335 PF13193 AMP-binding enzyme C-terminal domain FY134_17335 PF00501 AMP-binding enzyme FY134_17335 PF00550 Phosphopantetheine attachment site FY134_17335 PF00501 AMP-binding enzyme FY134_17350 PF07715 TonB-dependent Receptor Plug Domain FY134_17355 PF01497 Periplasmic binding protein FY134_17360 PF01032 FecCD transport family FY134_17365 PF01032 FecCD transport family FY134_17370 PF00005 ABC transporter FY134_17385 PF06832 Penicillin-Binding Protein C-terminus Family FY134_17385 PF00912 Transglycosylase FY134_17385 PF00905 Penicillin binding protein transpeptidase domain FY134_17390 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY134_17390 PF01835 MG2 domain FY134_17390 PF07678 A-macroglobulin TED domain FY134_17390 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY134_17390 PF17962 Bacterial macroglobulin domain 6 FY134_17390 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY134_17390 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY134_17390 PF07703 Alpha-2-macroglobulin bait region domain FY134_17390 PF00207 Alpha-2-macroglobulin family FY134_17395 PF03966 Trm112p-like protein FY134_17405 PF00085 Thioredoxin FY134_17420 PF02798 Glutathione S-transferase, N-terminal domain FY134_17445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY134_17445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY134_17445 PF01842 ACT domain FY134_17455 PF13505 Outer membrane protein beta-barrel domain FY134_17460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY134_17460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY134_17460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY134_17460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY134_17465 PF00004 ATPase family associated with various cellular activities (AAA) FY134_17465 PF17862 AAA+ lid domain FY134_17465 PF06480 FtsH Extracellular FY134_17465 PF01434 Peptidase family M41 FY134_17470 PF01171 PP-loop family FY134_17480 PF00691 OmpA family FY134_17485 PF07676 WD40-like Beta Propeller Repeat FY134_17485 PF04052 TolB amino-terminal domain FY134_17495 PF02472 Biopolymer transport protein ExbD/TolR FY134_17500 PF01618 MotA/TolQ/ExbB proton channel family FY134_17505 PF03061 Thioesterase superfamily FY134_17515 PF00293 NUDIX domain FY134_17520 PF05163 DinB family FY134_17530 PF17864 RuvB AAA lid domain FY134_17530 PF05491 RuvB C-terminal winged helix domain FY134_17530 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY134_17535 PF07499 RuvA, C-terminal domain FY134_17535 PF01330 RuvA N terminal domain FY134_17540 PF02075 Crossover junction endodeoxyribonuclease RuvC FY134_17545 PF00672 HAMP domain FY134_17545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_17550 PF00296 Luciferase-like monooxygenase FY134_17555 PF01709 Transcriptional regulator FY134_17570 PF13277 YmdB-like protein FY134_17580 PF00571 CBS domain FY134_17580 PF03471 Transporter associated domain FY134_17580 PF01595 Cyclin M transmembrane N-terminal domain FY134_17600 PF02779 Transketolase, pyrimidine binding domain FY134_17600 PF00456 Transketolase, thiamine diphosphate binding domain FY134_17600 PF02780 Transketolase, C-terminal domain FY134_17605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY134_17605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY134_17610 PF00999 Sodium/hydrogen exchanger family FY134_17610 PF03471 Transporter associated domain FY134_17615 PF00162 Phosphoglycerate kinase FY134_17620 PF00274 Fructose-bisphosphate aldolase class-I FY134_17640 PF01197 Ribosomal protein L31 FY134_17645 PF00005 ABC transporter FY134_17645 PF00664 ABC transporter transmembrane region FY134_17650 PF00890 FAD binding domain FY134_17655 PF01389 OmpA-like transmembrane domain FY134_17655 PF00691 OmpA family FY134_17665 PF00459 Inositol monophosphatase family FY134_17695 PF00731 AIR carboxylase FY134_17700 PF02222 ATP-grasp domain FY134_17700 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY134_17705 PF00444 Ribosomal protein L36 FY134_17715 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY134_17735 PF00224 Pyruvate kinase, barrel domain FY134_17735 PF02887 Pyruvate kinase, alpha/beta domain FY134_17740 PF05951 Bacterial protein of unknown function (DUF882) FY134_17745 PF00072 Response regulator receiver domain FY134_17745 PF00158 Sigma-54 interaction domain FY134_17745 PF02954 Bacterial regulatory protein, Fis family FY134_17750 PF08439 Oligopeptidase F FY134_17750 PF01432 Peptidase family M3 FY134_17755 PF01063 Amino-transferase class IV FY134_17760 PF00990 Diguanylate cyclase, GGDEF domain FY134_17765 PF16653 Saccharopine dehydrogenase C-terminal domain FY134_17765 PF03435 Saccharopine dehydrogenase NADP binding domain FY134_17775 PF00149 Calcineurin-like phosphoesterase FY134_17775 PF02872 5'-nucleotidase, C-terminal domain FY134_17780 PF00762 Ferrochelatase FY134_17785 PF01145 SPFH domain / Band 7 family FY134_17785 PF16200 C-terminal region of band_7 FY134_17795 PF01380 SIS domain FY134_17795 PF00571 CBS domain FY134_17815 PF00483 Nucleotidyl transferase FY134_17820 PF13406 Transglycosylase SLT domain FY134_17830 PF00072 Response regulator receiver domain FY134_17830 PF00486 Transcriptional regulatory protein, C terminal FY134_17835 PF00512 His Kinase A (phospho-acceptor) domain FY134_17835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_17835 PF00672 HAMP domain FY134_17840 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_17840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY134_17850 PF00310 Glutamine amidotransferases class-II FY134_17850 PF01645 Conserved region in glutamate synthase FY134_17850 PF04898 Glutamate synthase central domain FY134_17850 PF01493 GXGXG motif FY134_17855 PF01212 Beta-eliminating lyase FY134_17860 PF00072 Response regulator receiver domain FY134_17860 PF00486 Transcriptional regulatory protein, C terminal FY134_17865 PF02702 Osmosensitive K+ channel His kinase sensor domain FY134_17865 PF00512 His Kinase A (phospho-acceptor) domain FY134_17865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_17865 PF13492 GAF domain FY134_17865 PF13493 Domain of unknown function (DUF4118) FY134_17870 PF02669 K+-transporting ATPase, c chain FY134_17880 PF03814 Potassium-transporting ATPase A subunit FY134_17895 PF00710 Asparaginase, N-terminal FY134_17895 PF17763 Glutaminase/Asparaginase C-terminal domain FY134_17900 PF00324 Amino acid permease FY134_17905 PF10415 Fumarase C C-terminus FY134_17905 PF00206 Lyase FY134_17910 PF00392 Bacterial regulatory proteins, gntR family FY134_17910 PF07729 FCD domain FY134_17915 PF00873 AcrB/AcrD/AcrF family FY134_17925 PF00529 HlyD membrane-fusion protein of T1SS FY134_17925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY134_17935 PF00392 Bacterial regulatory proteins, gntR family FY134_17935 PF07702 UTRA domain FY134_17945 PF00528 Binding-protein-dependent transport system inner membrane component FY134_17950 PF00005 ABC transporter FY134_17950 PF00571 CBS domain FY134_17955 PF00221 Aromatic amino acid lyase FY134_17960 PF07690 Major Facilitator Superfamily FY134_17970 PF01053 Cys/Met metabolism PLP-dependent enzyme FY134_17975 PF01037 Lrp/AsnC ligand binding domain FY134_17980 PF03466 LysR substrate binding domain FY134_17980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_17985 PF00248 Aldo/keto reductase family FY134_17990 PF03466 LysR substrate binding domain FY134_17990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_17995 PF00857 Isochorismatase family FY134_18010 PF05336 L-rhamnose mutarotase FY134_18015 PF00392 Bacterial regulatory proteins, gntR family FY134_18015 PF07729 FCD domain FY134_18020 PF00248 Aldo/keto reductase family FY134_18025 PF08666 SAF domain FY134_18025 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY134_18030 PF00005 ABC transporter FY134_18035 PF02653 Branched-chain amino acid transport system / permease component FY134_18040 PF02653 Branched-chain amino acid transport system / permease component FY134_18045 PF13407 Periplasmic binding protein domain FY134_18055 PF08267 Cobalamin-independent synthase, N-terminal domain FY134_18055 PF01717 Cobalamin-independent synthase, Catalytic domain FY134_18070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_18070 PF03466 LysR substrate binding domain FY134_18080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_18080 PF03466 LysR substrate binding domain FY134_18100 PF03061 Thioesterase superfamily FY134_18120 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY134_18120 PF14403 Circularly permuted ATP-grasp type 2 FY134_18125 PF01841 Transglutaminase-like superfamily FY134_18125 PF08379 Bacterial transglutaminase-like N-terminal region FY134_18135 PF00005 ABC transporter FY134_18135 PF12848 ABC transporter FY134_18140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY134_18140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY134_18145 PF01070 FMN-dependent dehydrogenase FY134_18155 PF01047 MarR family FY134_18165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY134_18165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY134_18170 PF01791 DeoC/LacD family aldolase FY134_18175 PF01266 FAD dependent oxidoreductase FY134_18175 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY134_18180 PF00248 Aldo/keto reductase family FY134_18190 PF02653 Branched-chain amino acid transport system / permease component FY134_18195 PF00005 ABC transporter FY134_18200 PF13407 Periplasmic binding protein domain FY134_18265 PF13505 Outer membrane protein beta-barrel domain FY134_18315 PF00072 Response regulator receiver domain FY134_18325 PF00459 Inositol monophosphatase family FY134_18340 PF00011 Hsp20/alpha crystallin family FY134_18345 PF13593 SBF-like CPA transporter family (DUF4137) FY134_18350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_18350 PF03466 LysR substrate binding domain FY134_18355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY134_18355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY134_18370 PF00528 Binding-protein-dependent transport system inner membrane component FY134_18375 PF00528 Binding-protein-dependent transport system inner membrane component FY134_18380 PF00005 ABC transporter FY134_18380 PF17912 MalK OB fold domain FY134_18385 PF00005 ABC transporter FY134_18385 PF17912 MalK OB fold domain FY134_18385 PF03459 TOBE domain FY134_18390 PF01266 FAD dependent oxidoreductase FY134_18390 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY134_18395 PF08220 DeoR-like helix-turn-helix domain FY134_18395 PF00455 DeoR C terminal sensor domain FY134_18400 PF14824 Sirohaem biosynthesis protein central FY134_18400 PF10414 Sirohaem synthase dimerisation region FY134_18400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY134_18405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY134_18405 PF04324 BFD-like [2Fe-2S] binding domain FY134_18405 PF01568 Molydopterin dinucleotide binding domain FY134_18405 PF00384 Molybdopterin oxidoreductase FY134_18415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY134_18415 PF04324 BFD-like [2Fe-2S] binding domain FY134_18415 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_18415 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY134_18415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY134_18420 PF00005 ABC transporter FY134_18425 PF00528 Binding-protein-dependent transport system inner membrane component FY134_18440 PF08376 Nitrate and nitrite sensing FY134_18440 PF03861 ANTAR domain FY134_18445 PF00392 Bacterial regulatory proteins, gntR family FY134_18445 PF07729 FCD domain FY134_18450 PF01566 Natural resistance-associated macrophage protein FY134_18455 PF03746 LamB/YcsF family FY134_18460 PF07286 Protein of unknown function (DUF1445) FY134_18465 PF02682 Carboxyltransferase domain, subdomain C and D FY134_18470 PF02785 Biotin carboxylase C-terminal domain FY134_18470 PF00289 Biotin carboxylase, N-terminal domain FY134_18470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY134_18470 PF00364 Biotin-requiring enzyme FY134_18475 PF00128 Alpha amylase, catalytic domain FY134_18475 PF02806 Alpha amylase, C-terminal all-beta domain FY134_18480 PF00376 MerR family regulatory protein FY134_18480 PF09278 MerR, DNA binding FY134_18485 PF00593 TonB dependent receptor FY134_18485 PF07715 TonB-dependent Receptor Plug Domain FY134_18490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_18490 PF03466 LysR substrate binding domain FY134_18495 PF06772 Bacterial low temperature requirement A protein (LtrA) FY134_18510 PF03428 Replication protein C N-terminal domain FY134_18510 PF11800 Replication protein C C-terminal region FY134_18515 PF07506 RepB plasmid partitioning protein FY134_18515 PF02195 ParB-like nuclease domain FY134_18520 PF13614 AAA domain FY134_18530 PF01042 Endoribonuclease L-PSP FY134_18535 PF01168 Alanine racemase, N-terminal domain FY134_18535 PF14031 Putative serine dehydratase domain FY134_18540 PF07364 Metallopeptidase family M81 FY134_18540 PF07171 MlrC C-terminus FY134_18545 PF05962 HutD FY134_18550 PF12697 Alpha/beta hydrolase family FY134_18555 PF17392 Urocanase C-terminal domain FY134_18555 PF17391 Urocanase N-terminal domain FY134_18555 PF01175 Urocanase Rossmann-like domain FY134_18565 PF00221 Aromatic amino acid lyase FY134_18570 PF01979 Amidohydrolase family FY134_18575 PF01979 Amidohydrolase family FY134_18630 PF01266 FAD dependent oxidoreductase FY134_18635 PF14031 Putative serine dehydratase domain FY134_18635 PF01168 Alanine racemase, N-terminal domain FY134_18640 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY134_18645 PF00171 Aldehyde dehydrogenase family FY134_18650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_18650 PF03466 LysR substrate binding domain FY134_18655 PF01266 FAD dependent oxidoreductase FY134_18660 PF05544 Proline racemase FY134_18665 PF00528 Binding-protein-dependent transport system inner membrane component FY134_18670 PF00528 Binding-protein-dependent transport system inner membrane component FY134_18675 PF00005 ABC transporter FY134_18675 PF00571 CBS domain FY134_18685 PF01266 FAD dependent oxidoreductase FY134_18690 PF00171 Aldehyde dehydrogenase family FY134_18695 PF00701 Dihydrodipicolinate synthetase family FY134_18715 PF07729 FCD domain FY134_18715 PF00392 Bacterial regulatory proteins, gntR family FY134_18720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_18720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_18725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_18725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_18730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_18730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_18740 PF00528 Binding-protein-dependent transport system inner membrane component FY134_18745 PF00528 Binding-protein-dependent transport system inner membrane component FY134_18750 PF00005 ABC transporter FY134_18750 PF17912 MalK OB fold domain FY134_18750 PF03459 TOBE domain FY134_18755 PF00920 Dehydratase family FY134_18760 PF01370 NAD dependent epimerase/dehydratase family FY134_18765 PF03737 Aldolase/RraA FY134_18775 PF03275 UDP-galactopyranose mutase FY134_18790 PF03466 LysR substrate binding domain FY134_18790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_18795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY134_18810 PF07969 Amidohydrolase family FY134_18825 PF05977 Transmembrane secretion effector FY134_18840 PF03466 LysR substrate binding domain FY134_18840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_18845 PF07690 Major Facilitator Superfamily FY134_18890 PF13673 Acetyltransferase (GNAT) domain FY134_18895 PF06968 Biotin and Thiamin Synthesis associated domain FY134_18895 PF04055 Radical SAM superfamily FY134_18900 PF00155 Aminotransferase class I and II FY134_18910 PF00202 Aminotransferase class-III FY134_18915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY134_18915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY134_18945 PF00491 Arginase family FY134_18950 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY134_18955 PF00892 EamA-like transporter family FY134_18960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_18960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_18965 PF00211 Adenylate and Guanylate cyclase catalytic domain FY134_18975 PF11972 HTH DNA binding domain FY134_18975 PF07756 Protein of unknown function (DUF1612) FY134_18980 PF00083 Sugar (and other) transporter FY134_18985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_18985 PF00512 His Kinase A (phospho-acceptor) domain FY134_18990 PF00072 Response regulator receiver domain FY134_18990 PF00486 Transcriptional regulatory protein, C terminal FY134_18995 PF08019 Phosphoethanolamine transferase EptA/EptB FY134_18995 PF00884 Sulfatase FY134_19005 PF03466 LysR substrate binding domain FY134_19005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_19010 PF07715 TonB-dependent Receptor Plug Domain FY134_19010 PF00593 TonB dependent receptor FY134_19020 PF01032 FecCD transport family FY134_19025 PF00005 ABC transporter FY134_19035 PF00034 Cytochrome c FY134_19040 PF02631 RecX family FY134_19045 PF08450 SMP-30/Gluconolactonase/LRE-like region FY134_19055 PF02653 Branched-chain amino acid transport system / permease component FY134_19060 PF00005 ABC transporter FY134_19065 PF13407 Periplasmic binding protein domain FY134_19070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_19070 PF07730 Histidine kinase FY134_19075 PF00072 Response regulator receiver domain FY134_19075 PF00196 Bacterial regulatory proteins, luxR family FY134_19085 PF07995 Glucose / Sorbosone dehydrogenase FY134_19095 PF04445 Putative SAM-dependent methyltransferase FY134_19100 PF00849 RNA pseudouridylate synthase FY134_19105 PF01205 Uncharacterized protein family UPF0029 FY134_19110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY134_19110 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_19115 PF00571 CBS domain FY134_19115 PF00005 ABC transporter FY134_19120 PF00528 Binding-protein-dependent transport system inner membrane component FY134_19130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_19130 PF13426 PAS domain FY134_19130 PF00072 Response regulator receiver domain FY134_19135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY134_19140 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY134_19140 PF02706 Chain length determinant protein FY134_19140 PF13807 G-rich domain on putative tyrosine kinase FY134_19145 PF00483 Nucleotidyl transferase FY134_19150 PF00535 Glycosyl transferase family 2 FY134_19155 PF00535 Glycosyl transferase family 2 FY134_19160 PF00535 Glycosyl transferase family 2 FY134_19170 PF00722 Glycosyl hydrolases family 16 FY134_19175 PF01757 Acyltransferase family FY134_19180 PF01943 Polysaccharide biosynthesis protein FY134_19185 PF00535 Glycosyl transferase family 2 FY134_19190 PF04230 Polysaccharide pyruvyl transferase FY134_19195 PF00535 Glycosyl transferase family 2 FY134_19200 PF11089 Exopolysaccharide production repressor FY134_19215 PF01165 Ribosomal protein S21 FY134_19220 PF01266 FAD dependent oxidoreductase FY134_19235 PF01571 Aminomethyltransferase folate-binding domain FY134_19235 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY134_19235 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_19235 PF17806 Sarcosine oxidase A3 domain FY134_19250 PF01575 MaoC like domain FY134_19255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY134_19255 PF18390 Glycogen debranching enzyme C-terminal domain FY134_19255 PF00128 Alpha amylase, catalytic domain FY134_19260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY134_19260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY134_19260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY134_19260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY134_19265 PF08323 Starch synthase catalytic domain FY134_19265 PF00534 Glycosyl transferases group 1 FY134_19270 PF00483 Nucleotidyl transferase FY134_19275 PF02806 Alpha amylase, C-terminal all-beta domain FY134_19275 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY134_19275 PF00128 Alpha amylase, catalytic domain FY134_19280 PF00343 Carbohydrate phosphorylase FY134_19290 PF01177 Asp/Glu/Hydantoin racemase FY134_19295 PF01037 Lrp/AsnC ligand binding domain FY134_19305 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY134_19305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY134_19315 PF08240 Alcohol dehydrogenase GroES-like domain FY134_19315 PF00107 Zinc-binding dehydrogenase FY134_19325 PF00664 ABC transporter transmembrane region FY134_19325 PF00005 ABC transporter FY134_19330 PF00664 ABC transporter transmembrane region FY134_19330 PF00005 ABC transporter FY134_19335 PF01654 Cytochrome bd terminal oxidase subunit I FY134_19340 PF02322 Cytochrome bd terminal oxidase subunit II FY134_19345 PF08173 Membrane bound YbgT-like protein FY134_19365 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY134_19365 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY134_19370 PF00890 FAD binding domain FY134_19370 PF02910 Fumarate reductase flavoprotein C-term FY134_19375 PF02445 Quinolinate synthetase A protein FY134_19405 PF02224 Cytidylate kinase FY134_19410 PF00575 S1 RNA binding domain FY134_19440 PF00106 short chain dehydrogenase FY134_19445 PF01321 Creatinase/Prolidase N-terminal domain FY134_19445 PF00557 Metallopeptidase family M24 FY134_19450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_19455 PF00528 Binding-protein-dependent transport system inner membrane component FY134_19460 PF00528 Binding-protein-dependent transport system inner membrane component FY134_19460 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_19465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_19465 PF00005 ABC transporter FY134_19470 PF00005 ABC transporter FY134_19470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_19475 PF07729 FCD domain FY134_19475 PF00392 Bacterial regulatory proteins, gntR family FY134_19480 PF13378 Enolase C-terminal domain-like FY134_19480 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY134_19485 PF00296 Luciferase-like monooxygenase FY134_19500 PF00005 ABC transporter FY134_19500 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY134_19505 PF00005 ABC transporter FY134_19510 PF02653 Branched-chain amino acid transport system / permease component FY134_19515 PF11862 Domain of unknown function (DUF3382) FY134_19515 PF02653 Branched-chain amino acid transport system / permease component FY134_19520 PF00732 GMC oxidoreductase FY134_19520 PF05199 GMC oxidoreductase FY134_19525 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY134_19525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY134_19530 PF00501 AMP-binding enzyme FY134_19530 PF13193 AMP-binding enzyme C-terminal domain FY134_19555 PF01011 PQQ enzyme repeat FY134_19560 PF05974 Domain of unknown function (DUF892) FY134_19570 PF03275 UDP-galactopyranose mutase FY134_19590 PF01965 DJ-1/PfpI family FY134_19610 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY134_19610 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY134_19615 PF16363 GDP-mannose 4,6 dehydratase FY134_19620 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY134_19620 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY134_19620 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY134_19630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_19630 PF03466 LysR substrate binding domain FY134_19635 PF00171 Aldehyde dehydrogenase family FY134_19640 PF09084 NMT1/THI5 like FY134_19645 PF00528 Binding-protein-dependent transport system inner membrane component FY134_19650 PF00005 ABC transporter FY134_19655 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY134_19655 PF14850 DNA-binding domain of Proline dehydrogenase FY134_19655 PF01619 Proline dehydrogenase FY134_19655 PF00171 Aldehyde dehydrogenase family FY134_19660 PF01037 Lrp/AsnC ligand binding domain FY134_19665 PF08281 Sigma-70, region 4 FY134_19665 PF04542 Sigma-70 region 2 FY134_19675 PF00072 Response regulator receiver domain FY134_19680 PF08447 PAS fold FY134_19680 PF13426 PAS domain FY134_19680 PF07536 HWE histidine kinase FY134_19685 PF07536 HWE histidine kinase FY134_19685 PF13581 Histidine kinase-like ATPase domain FY134_19685 PF13426 PAS domain FY134_19695 PF16363 GDP-mannose 4,6 dehydratase FY134_19710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY134_19715 PF16653 Saccharopine dehydrogenase C-terminal domain FY134_19715 PF03435 Saccharopine dehydrogenase NADP binding domain FY134_19720 PF00270 DEAD/DEAH box helicase FY134_19720 PF00271 Helicase conserved C-terminal domain FY134_19725 PF00696 Amino acid kinase family FY134_19725 PF01842 ACT domain FY134_19725 PF13840 ACT domain FY134_19730 PF00391 PEP-utilising enzyme, mobile domain FY134_19730 PF02896 PEP-utilising enzyme, TIM barrel domain FY134_19730 PF05524 PEP-utilising enzyme, N-terminal FY134_19730 PF01590 GAF domain FY134_19735 PF03462 PCRF domain FY134_19735 PF00472 RF-1 domain FY134_19740 PF05175 Methyltransferase small domain FY134_19740 PF17827 PrmC N-terminal domain FY134_19750 PF17871 AAA lid domain FY134_19750 PF10431 C-terminal, D2-small domain, of ClpB protein FY134_19750 PF02861 Clp amino terminal domain, pathogenicity island component FY134_19750 PF07724 AAA domain (Cdc48 subfamily) FY134_19750 PF00004 ATPase family associated with various cellular activities (AAA) FY134_19755 PF01464 Transglycosylase SLT domain FY134_19755 PF01551 Peptidase family M23 FY134_19755 PF10145 Phage-related minor tail protein FY134_19795 PF00701 Dihydrodipicolinate synthetase family FY134_19800 PF08450 SMP-30/Gluconolactonase/LRE-like region FY134_19805 PF07729 FCD domain FY134_19805 PF00392 Bacterial regulatory proteins, gntR family FY134_19810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_19815 PF00528 Binding-protein-dependent transport system inner membrane component FY134_19820 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_19820 PF00528 Binding-protein-dependent transport system inner membrane component FY134_19825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_19825 PF00005 ABC transporter FY134_19830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY134_19830 PF13378 Enolase C-terminal domain-like FY134_19855 PF03358 NADPH-dependent FMN reductase FY134_19860 PF13649 Methyltransferase domain FY134_19865 PF01161 Phosphatidylethanolamine-binding protein FY134_19875 PF02909 Tetracyclin repressor-like, C-terminal domain FY134_19875 PF00440 Bacterial regulatory proteins, tetR family FY134_19880 PF07690 Major Facilitator Superfamily FY134_19890 PF00313 'Cold-shock' DNA-binding domain FY134_19900 PF02801 Beta-ketoacyl synthase, C-terminal domain FY134_19900 PF00109 Beta-ketoacyl synthase, N-terminal domain FY134_19915 PF00873 AcrB/AcrD/AcrF family FY134_19920 PF00106 short chain dehydrogenase FY134_19930 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY134_19930 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_19930 PF01571 Aminomethyltransferase folate-binding domain FY134_19930 PF17806 Sarcosine oxidase A3 domain FY134_19935 PF04267 Sarcosine oxidase, delta subunit family FY134_19940 PF01266 FAD dependent oxidoreductase FY134_19945 PF01965 DJ-1/PfpI family FY134_19945 PF12833 Helix-turn-helix domain FY134_19960 PF01493 GXGXG motif FY134_19965 PF01645 Conserved region in glutamate synthase FY134_19970 PF00120 Glutamine synthetase, catalytic domain FY134_19975 PF00551 Formyl transferase FY134_19980 PF07729 FCD domain FY134_19980 PF00392 Bacterial regulatory proteins, gntR family FY134_19990 PF00528 Binding-protein-dependent transport system inner membrane component FY134_19995 PF00005 ABC transporter FY134_20000 PF00465 Iron-containing alcohol dehydrogenase FY134_20010 PF12697 Alpha/beta hydrolase family FY134_20015 PF01613 Flavin reductase like domain FY134_20020 PF00296 Luciferase-like monooxygenase FY134_20025 PF00171 Aldehyde dehydrogenase family FY134_20040 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20045 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20050 PF08402 TOBE domain FY134_20050 PF00005 ABC transporter FY134_20055 PF00171 Aldehyde dehydrogenase family FY134_20060 PF03459 TOBE domain FY134_20060 PF17912 MalK OB fold domain FY134_20060 PF00005 ABC transporter FY134_20065 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20070 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20080 PF04205 FMN-binding domain FY134_20080 PF00890 FAD binding domain FY134_20085 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY134_20085 PF00356 Bacterial regulatory proteins, lacI family FY134_20095 PF00005 ABC transporter FY134_20095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_20100 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20100 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_20105 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_20115 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20120 PF00005 ABC transporter FY134_20130 PF04303 PrpF protein FY134_20135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_20135 PF03466 LysR substrate binding domain FY134_20145 PF00155 Aminotransferase class I and II FY134_20145 PF00392 Bacterial regulatory proteins, gntR family FY134_20155 PF01810 LysE type translocator FY134_20160 PF02567 Phenazine biosynthesis-like protein FY134_20165 PF00293 NUDIX domain FY134_20170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_20170 PF03466 LysR substrate binding domain FY134_20180 PF00364 Biotin-requiring enzyme FY134_20185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY134_20185 PF02785 Biotin carboxylase C-terminal domain FY134_20185 PF00289 Biotin carboxylase, N-terminal domain FY134_20200 PF02626 Carboxyltransferase domain, subdomain A and B FY134_20205 PF03746 LamB/YcsF family FY134_20210 PF00155 Aminotransferase class I and II FY134_20215 PF03466 LysR substrate binding domain FY134_20215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_20220 PF00106 short chain dehydrogenase FY134_20225 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20230 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20235 PF00005 ABC transporter FY134_20240 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_20245 PF03737 Aldolase/RraA FY134_20260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_20260 PF03466 LysR substrate binding domain FY134_20265 PF08240 Alcohol dehydrogenase GroES-like domain FY134_20265 PF00107 Zinc-binding dehydrogenase FY134_20270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_20270 PF03466 LysR substrate binding domain FY134_20275 PF07690 Major Facilitator Superfamily FY134_20280 PF00296 Luciferase-like monooxygenase FY134_20285 PF00248 Aldo/keto reductase family FY134_20290 PF01488 Shikimate / quinate 5-dehydrogenase FY134_20290 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY134_20290 PF08501 Shikimate dehydrogenase substrate binding domain FY134_20295 PF05199 GMC oxidoreductase FY134_20295 PF00732 GMC oxidoreductase FY134_20300 PF02311 AraC-like ligand binding domain FY134_20300 PF12833 Helix-turn-helix domain FY134_20305 PF00924 Mechanosensitive ion channel FY134_20315 PF00196 Bacterial regulatory proteins, luxR family FY134_20315 PF00072 Response regulator receiver domain FY134_20335 PF00924 Mechanosensitive ion channel FY134_20340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_20340 PF00512 His Kinase A (phospho-acceptor) domain FY134_20340 PF13493 Domain of unknown function (DUF4118) FY134_20340 PF13426 PAS domain FY134_20340 PF08447 PAS fold FY134_20340 PF00989 PAS fold FY134_20345 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY134_20345 PF00072 Response regulator receiver domain FY134_20345 PF01627 Hpt domain FY134_20345 PF00512 His Kinase A (phospho-acceptor) domain FY134_20345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_20345 PF00672 HAMP domain FY134_20350 PF00753 Metallo-beta-lactamase superfamily FY134_20350 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY134_20370 PF01266 FAD dependent oxidoreductase FY134_20380 PF17806 Sarcosine oxidase A3 domain FY134_20380 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_20380 PF01571 Aminomethyltransferase folate-binding domain FY134_20380 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY134_20390 PF00464 Serine hydroxymethyltransferase FY134_20395 PF00551 Formyl transferase FY134_20405 PF00440 Bacterial regulatory proteins, tetR family FY134_20410 PF00107 Zinc-binding dehydrogenase FY134_20410 PF08240 Alcohol dehydrogenase GroES-like domain FY134_20415 PF12833 Helix-turn-helix domain FY134_20420 PF13407 Periplasmic binding protein domain FY134_20425 PF00005 ABC transporter FY134_20430 PF02653 Branched-chain amino acid transport system / permease component FY134_20435 PF00106 short chain dehydrogenase FY134_20440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY134_20440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY134_20450 PF08946 Osmosensory transporter coiled coil FY134_20450 PF00083 Sugar (and other) transporter FY134_20460 PF02563 Polysaccharide biosynthesis/export protein FY134_20475 PF06761 Intracellular multiplication and human macrophage-killing FY134_20475 PF06744 Type VI secretion protein IcmF C-terminal FY134_20475 PF14331 ImcF-related N-terminal domain FY134_20480 PF00691 OmpA family FY134_20485 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY134_20500 PF05947 Type VI secretion system, TssF FY134_20520 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY134_20525 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY134_20535 PF10431 C-terminal, D2-small domain, of ClpB protein FY134_20535 PF17871 AAA lid domain FY134_20535 PF07724 AAA domain (Cdc48 subfamily) FY134_20535 PF00004 ATPase family associated with various cellular activities (AAA) FY134_20555 PF04717 Type VI secretion system, phage-baseplate injector FY134_20580 PF00563 EAL domain FY134_20580 PF08447 PAS fold FY134_20580 PF00990 Diguanylate cyclase, GGDEF domain FY134_20580 PF08448 PAS fold FY134_20590 PF03471 Transporter associated domain FY134_20590 PF03741 Integral membrane protein TerC family FY134_20605 PF03459 TOBE domain FY134_20605 PF17912 MalK OB fold domain FY134_20605 PF00005 ABC transporter FY134_20610 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20615 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20620 PF13416 Bacterial extracellular solute-binding protein FY134_20625 PF01261 Xylose isomerase-like TIM barrel FY134_20630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_20630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_20635 PF00356 Bacterial regulatory proteins, lacI family FY134_20650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_20650 PF03466 LysR substrate binding domain FY134_20660 PF13407 Periplasmic binding protein domain FY134_20665 PF00005 ABC transporter FY134_20670 PF02653 Branched-chain amino acid transport system / permease component FY134_20675 PF02653 Branched-chain amino acid transport system / permease component FY134_20680 PF00356 Bacterial regulatory proteins, lacI family FY134_20690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_20690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_20710 PF00034 Cytochrome c FY134_20715 PF04343 Protein of unknown function, DUF488 FY134_20725 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY134_20725 PF01648 4'-phosphopantetheinyl transferase superfamily FY134_20730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY134_20730 PF02770 Acyl-CoA dehydrogenase, middle domain FY134_20730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY134_20735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_20735 PF03466 LysR substrate binding domain FY134_20740 PF00356 Bacterial regulatory proteins, lacI family FY134_20750 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20760 PF00005 ABC transporter FY134_20760 PF08402 TOBE domain FY134_20770 PF01979 Amidohydrolase family FY134_20770 PF13382 Adenine deaminase C-terminal domain FY134_20775 PF03796 DnaB-like helicase C terminal domain FY134_20780 PF01546 Peptidase family M20/M25/M40 FY134_20780 PF07687 Peptidase dimerisation domain FY134_20790 PF01244 Membrane dipeptidase (Peptidase family M19) FY134_20795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_20800 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20805 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_20805 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_20810 PF00005 ABC transporter FY134_20815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_20815 PF00005 ABC transporter FY134_20820 PF03466 LysR substrate binding domain FY134_20820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_20825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_20830 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20835 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20835 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_20840 PF01425 Amidase FY134_20845 PF01965 DJ-1/PfpI family FY134_20855 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_20855 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20860 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_20870 PF07687 Peptidase dimerisation domain FY134_20870 PF01546 Peptidase family M20/M25/M40 FY134_20875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_20875 PF00005 ABC transporter FY134_20880 PF04198 Putative sugar-binding domain FY134_20890 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20895 PF00528 Binding-protein-dependent transport system inner membrane component FY134_20900 PF00005 ABC transporter FY134_20900 PF08402 TOBE domain FY134_20905 PF08125 Mannitol dehydrogenase C-terminal domain FY134_20905 PF01232 Mannitol dehydrogenase Rossmann domain FY134_20910 PF13419 Haloacid dehalogenase-like hydrolase FY134_20915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY134_20915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY134_20920 PF01418 Helix-turn-helix domain, rpiR family FY134_20920 PF01380 SIS domain FY134_20930 PF00633 Helix-hairpin-helix motif FY134_20930 PF10576 Iron-sulfur binding domain of endonuclease III FY134_20930 PF00730 HhH-GPD superfamily base excision DNA repair protein FY134_20940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY134_20940 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY134_20945 PF13936 Helix-turn-helix domain FY134_20945 PF04198 Putative sugar-binding domain FY134_20950 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY134_20955 PF09339 IclR helix-turn-helix domain FY134_20955 PF01614 Bacterial transcriptional regulator FY134_20970 PF00950 ABC 3 transport family FY134_20975 PF00950 ABC 3 transport family FY134_20980 PF00005 ABC transporter FY134_20985 PF01297 Zinc-uptake complex component A periplasmic FY134_20995 PF01336 OB-fold nucleic acid binding domain FY134_20995 PF00152 tRNA synthetases class II (D, K and N) FY134_21000 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY134_21005 PF02080 TrkA-C domain FY134_21005 PF03600 Citrate transporter FY134_21010 PF03741 Integral membrane protein TerC family FY134_21010 PF03471 Transporter associated domain FY134_21015 PF00440 Bacterial regulatory proteins, tetR family FY134_21020 PF13533 Biotin-lipoyl like FY134_21025 PF07690 Major Facilitator Superfamily FY134_21030 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY134_21030 PF00356 Bacterial regulatory proteins, lacI family FY134_21035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY134_21035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY134_21040 PF01261 Xylose isomerase-like TIM barrel FY134_21045 PF00232 Glycosyl hydrolase family 1 FY134_21050 PF00881 Nitroreductase family FY134_21055 PF00005 ABC transporter FY134_21055 PF09383 NIL domain FY134_21060 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21065 PF03180 NLPA lipoprotein FY134_21070 PF00990 Diguanylate cyclase, GGDEF domain FY134_21070 PF03707 Bacterial signalling protein N terminal repeat FY134_21070 PF13188 PAS domain FY134_21070 PF00563 EAL domain FY134_21075 PF00581 Rhodanese-like domain FY134_21075 PF17773 UPF0176 acylphosphatase like domain FY134_21085 PF01928 CYTH domain FY134_21090 PF01081 KDPG and KHG aldolase FY134_21110 PF03824 High-affinity nickel-transport protein FY134_21130 PF07690 Major Facilitator Superfamily FY134_21140 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY134_21140 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY134_21145 PF02633 Creatinine amidohydrolase FY134_21150 PF01047 MarR family FY134_21155 PF00356 Bacterial regulatory proteins, lacI family FY134_21165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY134_21165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY134_21170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_21170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_21175 PF04962 KduI/IolB family FY134_21180 PF01261 Xylose isomerase-like TIM barrel FY134_21185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY134_21185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY134_21185 PF00205 Thiamine pyrophosphate enzyme, central domain FY134_21190 PF00294 pfkB family carbohydrate kinase FY134_21200 PF00005 ABC transporter FY134_21205 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY134_21205 PF00005 ABC transporter FY134_21220 PF13458 Periplasmic binding protein FY134_21235 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21235 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_21240 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_21250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_21250 PF00005 ABC transporter FY134_21260 PF01261 Xylose isomerase-like TIM barrel FY134_21260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY134_21270 PF01220 Dehydroquinase class II FY134_21275 PF08501 Shikimate dehydrogenase substrate binding domain FY134_21275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY134_21280 PF00005 ABC transporter FY134_21285 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_21290 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_21295 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21300 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21305 PF10397 Adenylosuccinate lyase C-terminus FY134_21305 PF00206 Lyase FY134_21310 PF00775 Dioxygenase FY134_21315 PF00775 Dioxygenase FY134_21315 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY134_21320 PF02627 Carboxymuconolactone decarboxylase family FY134_21325 PF00561 alpha/beta hydrolase fold FY134_21330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_21330 PF03466 LysR substrate binding domain FY134_21335 PF01494 FAD binding domain FY134_21345 PF01614 Bacterial transcriptional regulator FY134_21345 PF09339 IclR helix-turn-helix domain FY134_21350 PF01144 Coenzyme A transferase FY134_21355 PF01144 Coenzyme A transferase FY134_21360 PF02803 Thiolase, C-terminal domain FY134_21360 PF00108 Thiolase, N-terminal domain FY134_21365 PF00356 Bacterial regulatory proteins, lacI family FY134_21370 PF13407 Periplasmic binding protein domain FY134_21375 PF13407 Periplasmic binding protein domain FY134_21380 PF01261 Xylose isomerase-like TIM barrel FY134_21385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_21385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_21395 PF00356 Bacterial regulatory proteins, lacI family FY134_21400 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21405 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21410 PF00005 ABC transporter FY134_21410 PF17912 MalK OB fold domain FY134_21420 PF07470 Glycosyl Hydrolase Family 88 FY134_21450 PF17912 MalK OB fold domain FY134_21450 PF00005 ABC transporter FY134_21455 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21460 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21465 PF03009 Glycerophosphoryl diester phosphodiesterase family FY134_21470 PF00459 Inositol monophosphatase family FY134_21475 PF00106 short chain dehydrogenase FY134_21480 PF12852 Cupin FY134_21480 PF12833 Helix-turn-helix domain FY134_21485 PF00480 ROK family FY134_21495 PF00005 ABC transporter FY134_21495 PF08402 TOBE domain FY134_21500 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21515 PF11953 Domain of unknown function (DUF3470) FY134_21515 PF00037 4Fe-4S binding domain FY134_21520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY134_21520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY134_21550 PF01758 Sodium Bile acid symporter family FY134_21555 PF00248 Aldo/keto reductase family FY134_21560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_21560 PF03466 LysR substrate binding domain FY134_21570 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY134_21590 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21595 PF00005 ABC transporter FY134_21605 PF00664 ABC transporter transmembrane region FY134_21605 PF00005 ABC transporter FY134_21615 PF00535 Glycosyl transferase family 2 FY134_21645 PF00535 Glycosyl transferase family 2 FY134_21650 PF05721 Phytanoyl-CoA dioxygenase (PhyH) FY134_21665 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FY134_21670 PF08889 WbqC-like protein family FY134_21675 PF13649 Methyltransferase domain FY134_21680 PF08241 Methyltransferase domain FY134_21685 PF01370 NAD dependent epimerase/dehydratase family FY134_21695 PF00483 Nucleotidyl transferase FY134_21700 PF04321 RmlD substrate binding domain FY134_21705 PF16363 GDP-mannose 4,6 dehydratase FY134_21710 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY134_21715 PF13361 UvrD-like helicase C-terminal domain FY134_21715 PF00580 UvrD/REP helicase N-terminal domain FY134_21720 PF00005 ABC transporter FY134_21720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_21725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_21725 PF00005 ABC transporter FY134_21730 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_21730 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21735 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21740 PF00392 Bacterial regulatory proteins, gntR family FY134_21740 PF07729 FCD domain FY134_21745 PF03786 D-mannonate dehydratase (UxuA) FY134_21750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_21760 PF13188 PAS domain FY134_21760 PF00563 EAL domain FY134_21760 PF03707 Bacterial signalling protein N terminal repeat FY134_21760 PF00990 Diguanylate cyclase, GGDEF domain FY134_21775 PF02735 Ku70/Ku80 beta-barrel domain FY134_21780 PF04679 ATP dependent DNA ligase C terminal region FY134_21780 PF01068 ATP dependent DNA ligase domain FY134_21780 PF13298 DNA polymerase Ligase (LigD) FY134_21785 PF02735 Ku70/Ku80 beta-barrel domain FY134_21790 PF01384 Phosphate transporter family FY134_21795 PF01865 Protein of unknown function DUF47 FY134_21810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_21810 PF03466 LysR substrate binding domain FY134_21815 PF00141 Peroxidase FY134_21820 PF12833 Helix-turn-helix domain FY134_21820 PF02311 AraC-like ligand binding domain FY134_21825 PF00171 Aldehyde dehydrogenase family FY134_21830 PF03466 LysR substrate binding domain FY134_21830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_21835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY134_21840 PF00884 Sulfatase FY134_21840 PF12411 Choline sulfatase enzyme C terminal FY134_21845 PF00294 pfkB family carbohydrate kinase FY134_21850 PF00005 ABC transporter FY134_21850 PF08402 TOBE domain FY134_21855 PF14698 Argininosuccinate lyase C-terminal FY134_21855 PF00206 Lyase FY134_21860 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21865 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21870 PF13416 Bacterial extracellular solute-binding protein FY134_21875 PF00480 ROK family FY134_21900 PF02056 Family 4 glycosyl hydrolase FY134_21900 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY134_21905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_21910 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21915 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21915 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_21920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_21920 PF00005 ABC transporter FY134_21925 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY134_21925 PF02056 Family 4 glycosyl hydrolase FY134_21930 PF13533 Biotin-lipoyl like FY134_21935 PF00005 ABC transporter FY134_21955 PF00072 Response regulator receiver domain FY134_21960 PF12327 FtsZ family, C-terminal domain FY134_21960 PF00091 Tubulin/FtsZ family, GTPase domain FY134_21965 PF07729 FCD domain FY134_21965 PF00392 Bacterial regulatory proteins, gntR family FY134_21970 PF00701 Dihydrodipicolinate synthetase family FY134_21975 PF02615 Malate/L-lactate dehydrogenase FY134_21985 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21990 PF00528 Binding-protein-dependent transport system inner membrane component FY134_21995 PF00005 ABC transporter FY134_22000 PF01266 FAD dependent oxidoreductase FY134_22010 PF05544 Proline racemase FY134_22015 PF00356 Bacterial regulatory proteins, lacI family FY134_22025 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_22030 PF00528 Binding-protein-dependent transport system inner membrane component FY134_22035 PF00528 Binding-protein-dependent transport system inner membrane component FY134_22040 PF00005 ABC transporter FY134_22045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY134_22045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY134_22050 PF00990 Diguanylate cyclase, GGDEF domain FY134_22050 PF03707 Bacterial signalling protein N terminal repeat FY134_22050 PF00563 EAL domain FY134_22055 PF02530 Porin subfamily FY134_22060 PF01979 Amidohydrolase family FY134_22065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_22070 PF00528 Binding-protein-dependent transport system inner membrane component FY134_22075 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_22075 PF00528 Binding-protein-dependent transport system inner membrane component FY134_22080 PF01979 Amidohydrolase family FY134_22085 PF01979 Amidohydrolase family FY134_22090 PF00005 ABC transporter FY134_22090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_22095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_22095 PF00005 ABC transporter FY134_22100 PF00392 Bacterial regulatory proteins, gntR family FY134_22100 PF07729 FCD domain FY134_22105 PF01613 Flavin reductase like domain FY134_22110 PF01177 Asp/Glu/Hydantoin racemase FY134_22115 PF03466 LysR substrate binding domain FY134_22115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_22125 PF00037 4Fe-4S binding domain FY134_22125 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY134_22125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY134_22130 PF00037 4Fe-4S binding domain FY134_22130 PF00384 Molybdopterin oxidoreductase FY134_22130 PF01568 Molydopterin dinucleotide binding domain FY134_22130 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY134_22130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY134_22140 PF07690 Major Facilitator Superfamily FY134_22145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_22150 PF00072 Response regulator receiver domain FY134_22150 PF00486 Transcriptional regulatory protein, C terminal FY134_22170 PF05532 CsbD-like FY134_22175 PF00072 Response regulator receiver domain FY134_22175 PF00196 Bacterial regulatory proteins, luxR family FY134_22180 PF00392 Bacterial regulatory proteins, gntR family FY134_22180 PF07729 FCD domain FY134_22185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_22190 PF00528 Binding-protein-dependent transport system inner membrane component FY134_22195 PF00528 Binding-protein-dependent transport system inner membrane component FY134_22195 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_22205 PF00005 ABC transporter FY134_22205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_22210 PF00459 Inositol monophosphatase family FY134_22220 PF00005 ABC transporter FY134_22220 PF08402 TOBE domain FY134_22225 PF00528 Binding-protein-dependent transport system inner membrane component FY134_22245 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY134_22245 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY134_22250 PF03401 Tripartite tricarboxylate transporter family receptor FY134_22255 PF00664 ABC transporter transmembrane region FY134_22255 PF00005 ABC transporter FY134_22260 PF00005 ABC transporter FY134_22270 PF13953 PapC C-terminal domain FY134_22270 PF13954 PapC N-terminal domain FY134_22270 PF00577 Outer membrane usher protein FY134_22285 PF00330 Aconitase family (aconitate hydratase) FY134_22285 PF06434 Aconitate hydratase 2 N-terminus FY134_22285 PF11791 Aconitate B N-terminal domain FY134_22290 PF00672 HAMP domain FY134_22290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_22300 PF00132 Bacterial transferase hexapeptide (six repeats) FY134_22310 PF08240 Alcohol dehydrogenase GroES-like domain FY134_22310 PF00107 Zinc-binding dehydrogenase FY134_22315 PF00158 Sigma-54 interaction domain FY134_22315 PF02954 Bacterial regulatory protein, Fis family FY134_22315 PF01590 GAF domain FY134_22325 PF00356 Bacterial regulatory proteins, lacI family FY134_22335 PF00005 ABC transporter FY134_22340 PF02653 Branched-chain amino acid transport system / permease component FY134_22345 PF02653 Branched-chain amino acid transport system / permease component FY134_22350 PF01261 Xylose isomerase-like TIM barrel FY134_22360 PF01261 Xylose isomerase-like TIM barrel FY134_22370 PF00005 ABC transporter FY134_22375 PF00528 Binding-protein-dependent transport system inner membrane component FY134_22380 PF00528 Binding-protein-dependent transport system inner membrane component FY134_22385 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_22390 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FY134_22395 PF00557 Metallopeptidase family M24 FY134_22395 PF01321 Creatinase/Prolidase N-terminal domain FY134_22400 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY134_22405 PF00291 Pyridoxal-phosphate dependent enzyme FY134_22410 PF00155 Aminotransferase class I and II FY134_22410 PF00392 Bacterial regulatory proteins, gntR family FY134_22415 PF00202 Aminotransferase class-III FY134_22420 PF00171 Aldehyde dehydrogenase family FY134_22425 PF01037 Lrp/AsnC ligand binding domain FY134_22430 PF13302 Acetyltransferase (GNAT) domain FY134_22450 PF04199 Putative cyclase FY134_22455 PF01494 FAD binding domain FY134_22460 PF00190 Cupin FY134_22470 PF00196 Bacterial regulatory proteins, luxR family FY134_22470 PF00072 Response regulator receiver domain FY134_22475 PF00072 Response regulator receiver domain FY134_22475 PF00196 Bacterial regulatory proteins, luxR family FY134_22480 PF00072 Response regulator receiver domain FY134_22480 PF08448 PAS fold FY134_22480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_22480 PF13426 PAS domain FY134_22480 PF00512 His Kinase A (phospho-acceptor) domain FY134_22485 PF00384 Molybdopterin oxidoreductase FY134_22490 PF00210 Ferritin-like domain FY134_22495 PF00561 alpha/beta hydrolase fold FY134_22510 PF06441 Epoxide hydrolase N terminus FY134_22515 PF00171 Aldehyde dehydrogenase family FY134_22520 PF02566 OsmC-like protein FY134_22525 PF00672 HAMP domain FY134_22525 PF00512 His Kinase A (phospho-acceptor) domain FY134_22525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_22530 PF00072 Response regulator receiver domain FY134_22530 PF00486 Transcriptional regulatory protein, C terminal FY134_22535 PF00561 alpha/beta hydrolase fold FY134_22545 PF00578 AhpC/TSA family FY134_22545 PF02683 Cytochrome C biogenesis protein transmembrane region FY134_22545 PF17991 Thioredoxin like C-terminal domain FY134_22565 PF13426 PAS domain FY134_22565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_22565 PF00072 Response regulator receiver domain FY134_22570 PF00072 Response regulator receiver domain FY134_22570 PF00486 Transcriptional regulatory protein, C terminal FY134_22585 PF00528 Binding-protein-dependent transport system inner membrane component FY134_22590 PF00005 ABC transporter FY134_22590 PF08402 TOBE domain FY134_22595 PF00459 Inositol monophosphatase family FY134_22605 PF16363 GDP-mannose 4,6 dehydratase FY134_22610 PF01370 NAD dependent epimerase/dehydratase family FY134_22635 PF00072 Response regulator receiver domain FY134_22635 PF00196 Bacterial regulatory proteins, luxR family FY134_22640 PF02585 GlcNAc-PI de-N-acetylase FY134_22645 PF00483 Nucleotidyl transferase FY134_22650 PF08421 Putative zinc binding domain FY134_22650 PF08484 C-methyltransferase C-terminal domain FY134_22655 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY134_22660 PF16221 winged helix-turn-helix FY134_22660 PF16254 Domain of unknown function (DUF4910) FY134_22660 PF09940 Domain of unknown function (DUF2172) FY134_22665 PF16363 GDP-mannose 4,6 dehydratase FY134_22670 PF00202 Aminotransferase class-III FY134_22675 PF00072 Response regulator receiver domain FY134_22675 PF00196 Bacterial regulatory proteins, luxR family FY134_22680 PF00072 Response regulator receiver domain FY134_22680 PF00196 Bacterial regulatory proteins, luxR family FY134_22700 PF00534 Glycosyl transferases group 1 FY134_22700 PF13439 Glycosyltransferase Family 4 FY134_22710 PF00953 Glycosyl transferase family 4 FY134_22730 PF00534 Glycosyl transferases group 1 FY134_22730 PF13439 Glycosyltransferase Family 4 FY134_22735 PF00534 Glycosyl transferases group 1 FY134_22735 PF13439 Glycosyltransferase Family 4 FY134_22745 PF01037 Lrp/AsnC ligand binding domain FY134_22770 PF00501 AMP-binding enzyme FY134_22770 PF13193 AMP-binding enzyme C-terminal domain FY134_22780 PF09339 IclR helix-turn-helix domain FY134_22780 PF01614 Bacterial transcriptional regulator FY134_22790 PF03480 Bacterial extracellular solute-binding protein, family 7 FY134_22790 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY134_22795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY134_22810 PF09137 Glucodextranase, domain N FY134_22810 PF00723 Glycosyl hydrolases family 15 FY134_22815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY134_22815 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY134_22820 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY134_22820 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY134_22845 PF08220 DeoR-like helix-turn-helix domain FY134_22845 PF00455 DeoR C terminal sensor domain FY134_22850 PF13407 Periplasmic binding protein domain FY134_22855 PF00005 ABC transporter FY134_22860 PF02653 Branched-chain amino acid transport system / permease component FY134_22865 PF02653 Branched-chain amino acid transport system / permease component FY134_22875 PF00294 pfkB family carbohydrate kinase FY134_22875 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY134_22880 PF01791 DeoC/LacD family aldolase FY134_22885 PF00171 Aldehyde dehydrogenase family FY134_22890 PF01810 LysE type translocator FY134_22895 PF01609 Transposase DDE domain FY134_22905 PF17841 BID domain of Bartonella effector protein (Bep) FY134_22905 PF03389 MobA/MobL family FY134_22905 PF01443 Viral (Superfamily 1) RNA helicase FY134_22920 PF02534 Type IV secretory system Conjugative DNA transfer FY134_22930 PF00300 Histidine phosphatase superfamily (branch 1) FY134_22955 PF13454 FAD-NAD(P)-binding FY134_23005 PF07411 Domain of unknown function (DUF1508) FY134_23020 PF13614 AAA domain FY134_23020 PF00376 MerR family regulatory protein FY134_23025 PF07506 RepB plasmid partitioning protein FY134_23025 PF02195 ParB-like nuclease domain FY134_23030 PF03428 Replication protein C N-terminal domain FY134_23030 PF11800 Replication protein C C-terminal region FY134_23040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_23040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_23045 PF00005 ABC transporter FY134_23050 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_23055 PF00356 Bacterial regulatory proteins, lacI family FY134_23075 PF01638 HxlR-like helix-turn-helix FY134_23115 PF07756 Protein of unknown function (DUF1612) FY134_23115 PF11972 HTH DNA binding domain FY134_23195 PF01850 PIN domain FY134_23205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_23205 PF03466 LysR substrate binding domain FY134_23210 PF01554 MatE FY134_23215 PF00155 Aminotransferase class I and II FY134_23230 PF00561 alpha/beta hydrolase fold FY134_23255 PF04193 PQ loop repeat FY134_23275 PF07536 HWE histidine kinase FY134_23275 PF13581 Histidine kinase-like ATPase domain FY134_23275 PF13426 PAS domain FY134_23290 PF00072 Response regulator receiver domain FY134_23300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY134_23300 PF00128 Alpha amylase, catalytic domain FY134_23310 PF04193 PQ loop repeat FY134_23325 PF01566 Natural resistance-associated macrophage protein FY134_23325 PF03358 NADPH-dependent FMN reductase FY134_23340 PF18011 C-terminal domain found in long catalases FY134_23340 PF00199 Catalase FY134_23340 PF06628 Catalase-related immune-responsive FY134_23345 PF05974 Domain of unknown function (DUF892) FY134_23375 PF04542 Sigma-70 region 2 FY134_23375 PF08281 Sigma-70, region 4 FY134_23380 PF11941 Domain of unknown function (DUF3459) FY134_23380 PF00128 Alpha amylase, catalytic domain FY134_23380 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY134_23385 PF08323 Starch synthase catalytic domain FY134_23385 PF00534 Glycosyl transferases group 1 FY134_23465 PF00356 Bacterial regulatory proteins, lacI family FY134_23475 PF02653 Branched-chain amino acid transport system / permease component FY134_23480 PF00005 ABC transporter FY134_23490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_23490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_23500 PF00005 ABC transporter FY134_23500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_23505 PF00005 ABC transporter FY134_23505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_23510 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_23510 PF00528 Binding-protein-dependent transport system inner membrane component FY134_23515 PF00528 Binding-protein-dependent transport system inner membrane component FY134_23520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_23525 PF00392 Bacterial regulatory proteins, gntR family FY134_23525 PF07729 FCD domain FY134_23530 PF00701 Dihydrodipicolinate synthetase family FY134_23535 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY134_23535 PF13378 Enolase C-terminal domain-like FY134_23540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_23540 PF03466 LysR substrate binding domain FY134_23545 PF00043 Glutathione S-transferase, C-terminal domain FY134_23545 PF02798 Glutathione S-transferase, N-terminal domain FY134_23575 PF02735 Ku70/Ku80 beta-barrel domain FY134_23580 PF02735 Ku70/Ku80 beta-barrel domain FY134_23585 PF04679 ATP dependent DNA ligase C terminal region FY134_23585 PF01068 ATP dependent DNA ligase domain FY134_23585 PF13298 DNA polymerase Ligase (LigD) FY134_23605 PF13298 DNA polymerase Ligase (LigD) FY134_23605 PF04679 ATP dependent DNA ligase C terminal region FY134_23605 PF01068 ATP dependent DNA ligase domain FY134_23620 PF13416 Bacterial extracellular solute-binding protein FY134_23625 PF00528 Binding-protein-dependent transport system inner membrane component FY134_23630 PF00528 Binding-protein-dependent transport system inner membrane component FY134_23640 PF08402 TOBE domain FY134_23640 PF00005 ABC transporter FY134_23645 PF01418 Helix-turn-helix domain, rpiR family FY134_23645 PF01380 SIS domain FY134_23650 PF01047 MarR family FY134_23655 PF00561 alpha/beta hydrolase fold FY134_23665 PF00701 Dihydrodipicolinate synthetase family FY134_23670 PF00005 ABC transporter FY134_23670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_23675 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_23675 PF00528 Binding-protein-dependent transport system inner membrane component FY134_23680 PF00528 Binding-protein-dependent transport system inner membrane component FY134_23685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_23695 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY134_23700 PF00465 Iron-containing alcohol dehydrogenase FY134_23705 PF00392 Bacterial regulatory proteins, gntR family FY134_23705 PF07729 FCD domain FY134_23710 PF17042 Nucleotide-binding C-terminal domain FY134_23710 PF07005 Sugar-binding N-terminal domain FY134_23730 PF00085 Thioredoxin FY134_23730 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_23735 PF16859 Tetracyclin repressor-like, C-terminal domain FY134_23735 PF00440 Bacterial regulatory proteins, tetR family FY134_23745 PF01022 Bacterial regulatory protein, arsR family FY134_23760 PF13784 Fic/DOC family N-terminal FY134_23760 PF02661 Fic/DOC family FY134_23765 PF00440 Bacterial regulatory proteins, tetR family FY134_23775 PF00561 alpha/beta hydrolase fold FY134_23780 PF12833 Helix-turn-helix domain FY134_23780 PF01965 DJ-1/PfpI family FY134_23785 PF13635 Domain of unknown function (DUF4143) FY134_23785 PF13173 AAA domain FY134_23790 PF00285 Citrate synthase, C-terminal domain FY134_23795 PF00285 Citrate synthase, C-terminal domain FY134_23815 PF00561 alpha/beta hydrolase fold FY134_23845 PF07704 Rv0623-like transcription factor FY134_23860 PF00672 HAMP domain FY134_23860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_23865 PF01966 HD domain FY134_23865 PF11871 Domain of unknown function (DUF3391) FY134_23875 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY134_23875 PF01266 FAD dependent oxidoreductase FY134_23880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY134_23880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY134_23890 PF00528 Binding-protein-dependent transport system inner membrane component FY134_23895 PF00528 Binding-protein-dependent transport system inner membrane component FY134_23900 PF00005 ABC transporter FY134_23900 PF08402 TOBE domain FY134_23910 PF04198 Putative sugar-binding domain FY134_23925 PF13545 Crp-like helix-turn-helix domain FY134_23925 PF00027 Cyclic nucleotide-binding domain FY134_23930 PF00072 Response regulator receiver domain FY134_23930 PF00196 Bacterial regulatory proteins, luxR family FY134_23935 PF00512 His Kinase A (phospho-acceptor) domain FY134_23935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_23935 PF00989 PAS fold FY134_23940 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FY134_23955 PF07732 Multicopper oxidase FY134_23955 PF00394 Multicopper oxidase FY134_23975 PF00092 von Willebrand factor type A domain FY134_23980 PF07728 AAA domain (dynein-related subfamily) FY134_23980 PF08406 CbbQ/NirQ/NorQ C-terminal FY134_23985 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY134_23990 PF00034 Cytochrome c FY134_24000 PF00510 Cytochrome c oxidase subunit III FY134_24010 PF02441 Flavoprotein FY134_24015 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FY134_24020 PF04343 Protein of unknown function, DUF488 FY134_24030 PF01136 Peptidase family U32 FY134_24055 PF00005 ABC transporter FY134_24065 PF06796 Periplasmic nitrate reductase protein NapE FY134_24080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY134_24080 PF00384 Molybdopterin oxidoreductase FY134_24080 PF01568 Molydopterin dinucleotide binding domain FY134_24085 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FY134_24090 PF03264 NapC/NirT cytochrome c family, N-terminal region FY134_24130 PF15975 Flotillin FY134_24130 PF01145 SPFH domain / Band 7 family FY134_24155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_24155 PF03466 LysR substrate binding domain FY134_24180 PF03466 LysR substrate binding domain FY134_24180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_24190 PF00528 Binding-protein-dependent transport system inner membrane component FY134_24195 PF00528 Binding-protein-dependent transport system inner membrane component FY134_24200 PF08402 TOBE domain FY134_24200 PF00005 ABC transporter FY134_24205 PF13454 FAD-NAD(P)-binding FY134_24210 PF01323 DSBA-like thioredoxin domain FY134_24225 PF01554 MatE FY134_24250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY134_24250 PF00356 Bacterial regulatory proteins, lacI family FY134_24255 PF01261 Xylose isomerase-like TIM barrel FY134_24260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_24260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_24265 PF01261 Xylose isomerase-like TIM barrel FY134_24270 PF01638 HxlR-like helix-turn-helix FY134_24295 PF00672 HAMP domain FY134_24295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_24310 PF00106 short chain dehydrogenase FY134_24315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY134_24320 PF00561 alpha/beta hydrolase fold FY134_24325 PF08240 Alcohol dehydrogenase GroES-like domain FY134_24325 PF00107 Zinc-binding dehydrogenase FY134_24330 PF05406 WGR domain FY134_24335 PF00011 Hsp20/alpha crystallin family FY134_24345 PF00005 ABC transporter FY134_24350 PF12704 MacB-like periplasmic core domain FY134_24350 PF02687 FtsX-like permease family FY134_24365 PF05035 2-keto-3-deoxy-galactonokinase FY134_24370 PF00701 Dihydrodipicolinate synthetase family FY134_24375 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY134_24375 PF13378 Enolase C-terminal domain-like FY134_24385 PF00528 Binding-protein-dependent transport system inner membrane component FY134_24390 PF00528 Binding-protein-dependent transport system inner membrane component FY134_24395 PF17912 MalK OB fold domain FY134_24395 PF00005 ABC transporter FY134_24400 PF16363 GDP-mannose 4,6 dehydratase FY134_24405 PF09339 IclR helix-turn-helix domain FY134_24405 PF01614 Bacterial transcriptional regulator FY134_24415 PF02705 K+ potassium transporter FY134_24425 PF00817 impB/mucB/samB family FY134_24425 PF11799 impB/mucB/samB family C-terminal domain FY134_24440 PF00665 Integrase core domain FY134_24440 PF13936 Helix-turn-helix domain FY134_24445 PF01063 Amino-transferase class IV FY134_24450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY134_24460 PF00117 Glutamine amidotransferase class-I FY134_24460 PF06418 CTP synthase N-terminus FY134_24465 PF00557 Metallopeptidase family M24 FY134_24465 PF01321 Creatinase/Prolidase N-terminal domain FY134_24470 PF13378 Enolase C-terminal domain-like FY134_24470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY134_24475 PF07687 Peptidase dimerisation domain FY134_24475 PF01546 Peptidase family M20/M25/M40 FY134_24480 PF00005 ABC transporter FY134_24485 PF00528 Binding-protein-dependent transport system inner membrane component FY134_24490 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_24495 PF00392 Bacterial regulatory proteins, gntR family FY134_24495 PF07729 FCD domain FY134_24525 PF08281 Sigma-70, region 4 FY134_24525 PF04542 Sigma-70 region 2 FY134_24535 PF18011 C-terminal domain found in long catalases FY134_24535 PF06628 Catalase-related immune-responsive FY134_24535 PF00199 Catalase FY134_24550 PF05974 Domain of unknown function (DUF892) FY134_24555 PF00561 alpha/beta hydrolase fold FY134_24560 PF17925 Tetracyclin repressor-like, C-terminal domain FY134_24560 PF00440 Bacterial regulatory proteins, tetR family FY134_24565 PF02625 XdhC and CoxI family FY134_24565 PF13478 XdhC Rossmann domain FY134_24570 PF00111 2Fe-2S iron-sulfur cluster binding domain FY134_24570 PF01799 [2Fe-2S] binding domain FY134_24575 PF03450 CO dehydrogenase flavoprotein C-terminal domain FY134_24575 PF00941 FAD binding domain in molybdopterin dehydrogenase FY134_24580 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY134_24580 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY134_24585 PF12804 MobA-like NTP transferase domain FY134_24585 PF00132 Bacterial transferase hexapeptide (six repeats) FY134_24605 PF00072 Response regulator receiver domain FY134_24605 PF00486 Transcriptional regulatory protein, C terminal FY134_24610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_24630 PF00072 Response regulator receiver domain FY134_24630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_24630 PF13426 PAS domain FY134_24635 PF06745 KaiC FY134_24650 PF00313 'Cold-shock' DNA-binding domain FY134_24655 PF00226 DnaJ domain FY134_24660 PF07478 D-ala D-ala ligase C-terminus FY134_24660 PF01820 D-ala D-ala ligase N-terminus FY134_24675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY134_24675 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY134_24680 PF00005 ABC transporter FY134_24700 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY134_24700 PF00005 ABC transporter FY134_24705 PF00296 Luciferase-like monooxygenase FY134_24710 PF03358 NADPH-dependent FMN reductase FY134_24715 PF13581 Histidine kinase-like ATPase domain FY134_24715 PF07536 HWE histidine kinase FY134_24715 PF13426 PAS domain FY134_24735 PF13458 Periplasmic binding protein FY134_24740 PF02653 Branched-chain amino acid transport system / permease component FY134_24750 PF00005 ABC transporter FY134_24750 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY134_24755 PF00005 ABC transporter FY134_24755 PF09383 NIL domain FY134_24760 PF00795 Carbon-nitrogen hydrolase FY134_24770 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY134_24770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY134_24780 PF13533 Biotin-lipoyl like FY134_24790 PF04632 Fusaric acid resistance protein family FY134_24800 PF12833 Helix-turn-helix domain FY134_24800 PF02311 AraC-like ligand binding domain FY134_24810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_24810 PF03466 LysR substrate binding domain FY134_24815 PF00753 Metallo-beta-lactamase superfamily FY134_24825 PF13614 AAA domain FY134_24830 PF07506 RepB plasmid partitioning protein FY134_24830 PF02195 ParB-like nuclease domain FY134_24835 PF03428 Replication protein C N-terminal domain FY134_24835 PF11800 Replication protein C C-terminal region FY134_24840 PF00239 Resolvase, N terminal domain FY134_24845 PF11972 HTH DNA binding domain FY134_24845 PF07756 Protein of unknown function (DUF1612) FY134_24865 PF08808 RES domain FY134_24885 PF03466 LysR substrate binding domain FY134_24885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_24895 PF00528 Binding-protein-dependent transport system inner membrane component FY134_24900 PF00005 ABC transporter FY134_24905 PF09084 NMT1/THI5 like FY134_24910 PF00296 Luciferase-like monooxygenase FY134_24915 PF00296 Luciferase-like monooxygenase FY134_24925 PF00732 GMC oxidoreductase FY134_24925 PF05199 GMC oxidoreductase FY134_24930 PF00561 alpha/beta hydrolase fold FY134_24950 PF02653 Branched-chain amino acid transport system / permease component FY134_24955 PF00005 ABC transporter FY134_24965 PF00753 Metallo-beta-lactamase superfamily FY134_24970 PF02770 Acyl-CoA dehydrogenase, middle domain FY134_24970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY134_24970 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY134_24975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_24980 PF00005 ABC transporter FY134_24980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_24985 PF00528 Binding-protein-dependent transport system inner membrane component FY134_24985 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_24990 PF00528 Binding-protein-dependent transport system inner membrane component FY134_25000 PF00296 Luciferase-like monooxygenase FY134_25005 PF00296 Luciferase-like monooxygenase FY134_25010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_25010 PF03466 LysR substrate binding domain FY134_25020 PF01434 Peptidase family M41 FY134_25020 PF17862 AAA+ lid domain FY134_25020 PF00004 ATPase family associated with various cellular activities (AAA) FY134_25035 PF00005 ABC transporter FY134_25035 PF00664 ABC transporter transmembrane region FY134_25040 PF00005 ABC transporter FY134_25040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_25045 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_25045 PF00528 Binding-protein-dependent transport system inner membrane component FY134_25050 PF00528 Binding-protein-dependent transport system inner membrane component FY134_25055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_25065 PF01261 Xylose isomerase-like TIM barrel FY134_25070 PF00291 Pyridoxal-phosphate dependent enzyme FY134_25075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY134_25085 PF02195 ParB-like nuclease domain FY134_25095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY134_25095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY134_25095 PF01842 ACT domain FY134_25100 PF00483 Nucleotidyl transferase FY134_25105 PF00155 Aminotransferase class I and II FY134_25130 PF04679 ATP dependent DNA ligase C terminal region FY134_25130 PF01068 ATP dependent DNA ligase domain FY134_25130 PF13298 DNA polymerase Ligase (LigD) FY134_25145 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY134_25145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY134_25145 PF14579 Helix-hairpin-helix motif FY134_25145 PF02811 PHP domain FY134_25160 PF17841 BID domain of Bartonella effector protein (Bep) FY134_25160 PF02661 Fic/DOC family FY134_25185 PF17762 HTH domain found in ParB protein FY134_25185 PF02195 ParB-like nuclease domain FY134_25210 PF03831 PhnA domain FY134_25210 PF08274 PhnA Zinc-Ribbon FY134_25260 PF05284 Protein of unknown function (DUF736) FY134_25265 PF00216 Bacterial DNA-binding protein FY134_25285 PF02534 Type IV secretory system Conjugative DNA transfer FY134_25290 PF06412 Conjugal transfer protein TraD FY134_25295 PF07820 TraC-like protein FY134_25300 PF01443 Viral (Superfamily 1) RNA helicase FY134_25300 PF17841 BID domain of Bartonella effector protein (Bep) FY134_25300 PF03389 MobA/MobL family FY134_25305 PF10502 Signal peptidase, peptidase S26 FY134_25310 PF00795 Carbon-nitrogen hydrolase FY134_25315 PF06871 TraH_2 FY134_25320 PF09228 Prokaryotic Transcriptional repressor TraM FY134_25325 PF08447 PAS fold FY134_25325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY134_25325 PF13426 PAS domain FY134_25335 PF03472 Autoinducer binding domain FY134_25335 PF00196 Bacterial regulatory proteins, luxR family FY134_25340 PF00128 Alpha amylase, catalytic domain FY134_25345 PF02690 Na+/Pi-cotransporter FY134_25355 PF00455 DeoR C terminal sensor domain FY134_25355 PF08220 DeoR-like helix-turn-helix domain FY134_25360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_25365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_25365 PF00005 ABC transporter FY134_25370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_25370 PF00005 ABC transporter FY134_25375 PF00528 Binding-protein-dependent transport system inner membrane component FY134_25380 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_25380 PF00528 Binding-protein-dependent transport system inner membrane component FY134_25385 PF03009 Glycerophosphoryl diester phosphodiesterase family FY134_25390 PF00459 Inositol monophosphatase family FY134_25415 PF00067 Cytochrome P450 FY134_25420 PF00067 Cytochrome P450 FY134_25435 PF06903 VirK protein FY134_25470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_25470 PF00512 His Kinase A (phospho-acceptor) domain FY134_25475 PF01464 Transglycosylase SLT domain FY134_25480 PF04956 TrbC/VIRB2 family FY134_25485 PF05101 Type IV secretory pathway, VirB3-like protein FY134_25490 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY134_25500 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY134_25505 PF17413 Outer membrane lipoprotein virB7 FY134_25510 PF04335 VirB8 protein FY134_25515 PF03524 Conjugal transfer protein FY134_25520 PF03743 Bacterial conjugation TrbI-like protein FY134_25525 PF00437 Type II/IV secretion system protein FY134_25530 PF00072 Response regulator receiver domain FY134_25530 PF00486 Transcriptional regulatory protein, C terminal FY134_25535 PF07181 VirC2 protein FY134_25540 PF07015 VirC1 protein FY134_25545 PF07328 T-DNA border endonuclease VirD1 FY134_25550 PF03432 Relaxase/Mobilisation nuclease domain FY134_25560 PF02534 Type IV secretory system Conjugative DNA transfer FY134_25580 PF12189 Single-strand DNA-binding protein FY134_25585 PF07229 VirE2 FY134_25605 PF05717 IS66 Orf2 like protein FY134_25610 PF00196 Bacterial regulatory proteins, luxR family FY134_25610 PF03472 Autoinducer binding domain FY134_25625 PF00459 Inositol monophosphatase family FY134_25660 PF02027 RolB/RolC glucosidase family FY134_25665 PF01425 Amidase FY134_25670 PF02027 RolB/RolC glucosidase family FY134_25670 PF01593 Flavin containing amine oxidoreductase FY134_25680 PF02027 RolB/RolC glucosidase family FY134_25685 PF01380 SIS domain FY134_25690 PF00106 short chain dehydrogenase FY134_25690 PF00300 Histidine phosphatase superfamily (branch 1) FY134_25695 PF00557 Metallopeptidase family M24 FY134_25695 PF01321 Creatinase/Prolidase N-terminal domain FY134_25715 PF00528 Binding-protein-dependent transport system inner membrane component FY134_25720 PF00528 Binding-protein-dependent transport system inner membrane component FY134_25725 PF08402 TOBE domain FY134_25725 PF00005 ABC transporter FY134_25755 PF00005 ABC transporter FY134_25755 PF08402 TOBE domain FY134_25760 PF01321 Creatinase/Prolidase N-terminal domain FY134_25760 PF00557 Metallopeptidase family M24 FY134_25765 PF00294 pfkB family carbohydrate kinase FY134_25780 PF00106 short chain dehydrogenase FY134_25785 PF00920 Dehydratase family FY134_25790 PF00248 Aldo/keto reductase family FY134_25805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_25810 PF00528 Binding-protein-dependent transport system inner membrane component FY134_25810 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_25815 PF00528 Binding-protein-dependent transport system inner membrane component FY134_25820 PF00005 ABC transporter FY134_25820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_25825 PF00300 Histidine phosphatase superfamily (branch 1) FY134_25825 PF00106 short chain dehydrogenase FY134_25830 PF01266 FAD dependent oxidoreductase FY134_25835 PF05378 Hydantoinase/oxoprolinase N-terminal region FY134_25835 PF01968 Hydantoinase/oxoprolinase FY134_25850 PF08220 DeoR-like helix-turn-helix domain FY134_25850 PF00455 DeoR C terminal sensor domain FY134_25860 PF00528 Binding-protein-dependent transport system inner membrane component FY134_25865 PF00528 Binding-protein-dependent transport system inner membrane component FY134_25865 PF12911 N-terminal TM domain of oligopeptide transport permease C FY134_25870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY134_25870 PF00005 ABC transporter FY134_25875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY134_25885 PF03743 Bacterial conjugation TrbI-like protein FY134_25895 PF03524 Conjugal transfer protein FY134_25900 PF04335 VirB8 protein FY134_25905 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY134_25910 PF10907 Protein of unknown function (DUF2749) FY134_25920 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY134_25925 PF05101 Type IV secretory pathway, VirB3-like protein FY134_25930 PF04956 TrbC/VIRB2 family FY134_25935 PF00437 Type II/IV secretion system protein FY134_25940 PF00765 Autoinducer synthase FY134_25945 PF13614 AAA domain FY134_25950 PF02195 ParB-like nuclease domain FY134_25950 PF07506 RepB plasmid partitioning protein FY134_25955 PF11800 Replication protein C C-terminal region FY134_25955 PF03428 Replication protein C N-terminal domain FY134_26020 PF01734 Patatin-like phospholipase FY134_26035 PF14464 Prokaryotic homologs of the JAB domain FY134_26045 PF07729 FCD domain FY134_26045 PF00392 Bacterial regulatory proteins, gntR family FY134_26050 PF02219 Methylenetetrahydrofolate reductase FY134_26055 PF01571 Aminomethyltransferase folate-binding domain FY134_26060 PF01464 Transglycosylase SLT domain FY134_26060 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_26065 PF03328 HpcH/HpaI aldolase/citrate lyase family FY134_26070 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY134_26075 PF00775 Dioxygenase FY134_26075 PF04444 Catechol dioxygenase N terminus FY134_26080 PF13458 Periplasmic binding protein FY134_26095 PF00005 ABC transporter FY134_26095 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY134_26100 PF00005 ABC transporter FY134_26105 PF01571 Aminomethyltransferase folate-binding domain FY134_26110 PF00551 Formyl transferase FY134_26115 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY134_26115 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY134_26120 PF00456 Transketolase, thiamine diphosphate binding domain FY134_26125 PF02779 Transketolase, pyrimidine binding domain FY134_26125 PF02780 Transketolase, C-terminal domain FY134_26130 PF00171 Aldehyde dehydrogenase family FY134_26135 PF08240 Alcohol dehydrogenase GroES-like domain FY134_26135 PF00107 Zinc-binding dehydrogenase FY134_26140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY134_26140 PF08501 Shikimate dehydrogenase substrate binding domain FY134_26140 PF01488 Shikimate / quinate 5-dehydrogenase FY134_26145 PF00465 Iron-containing alcohol dehydrogenase FY134_26165 PF07729 FCD domain FY134_26165 PF00392 Bacterial regulatory proteins, gntR family FY134_26175 PF03480 Bacterial extracellular solute-binding protein, family 7 FY134_26185 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY134_26190 PF07729 FCD domain FY134_26190 PF00392 Bacterial regulatory proteins, gntR family FY134_26200 PF00005 ABC transporter FY134_26205 PF00528 Binding-protein-dependent transport system inner membrane component FY134_26210 PF00528 Binding-protein-dependent transport system inner membrane component FY134_26215 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_26220 PF05378 Hydantoinase/oxoprolinase N-terminal region FY134_26220 PF01968 Hydantoinase/oxoprolinase FY134_26230 PF00155 Aminotransferase class I and II FY134_26235 PF00701 Dihydrodipicolinate synthetase family FY134_26240 PF12697 Alpha/beta hydrolase family FY134_26255 PF00356 Bacterial regulatory proteins, lacI family FY134_26260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_26260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_26265 PF01261 Xylose isomerase-like TIM barrel FY134_26270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_26270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_26275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_26275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_26285 PF04962 KduI/IolB family FY134_26290 PF01261 Xylose isomerase-like TIM barrel FY134_26295 PF00205 Thiamine pyrophosphate enzyme, central domain FY134_26295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY134_26295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY134_26300 PF00294 pfkB family carbohydrate kinase FY134_26310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY134_26310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY134_26315 PF01261 Xylose isomerase-like TIM barrel FY134_26325 PF02653 Branched-chain amino acid transport system / permease component FY134_26330 PF00005 ABC transporter FY134_26335 PF13407 Periplasmic binding protein domain FY134_26340 PF00356 Bacterial regulatory proteins, lacI family FY134_26345 PF00440 Bacterial regulatory proteins, tetR family FY134_26345 PF17922 Tetracyclin repressor-like, C-terminal domain FY134_26350 PF00529 HlyD membrane-fusion protein of T1SS FY134_26350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY134_26355 PF00873 AcrB/AcrD/AcrF family FY134_26360 PF00440 Bacterial regulatory proteins, tetR family FY134_26380 PF01053 Cys/Met metabolism PLP-dependent enzyme FY134_26385 PF00491 Arginase family FY134_26390 PF00528 Binding-protein-dependent transport system inner membrane component FY134_26395 PF00528 Binding-protein-dependent transport system inner membrane component FY134_26400 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_26405 PF00005 ABC transporter FY134_26410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_26410 PF03466 LysR substrate binding domain FY134_26415 PF01037 Lrp/AsnC ligand binding domain FY134_26420 PF01636 Phosphotransferase enzyme family FY134_26425 PF00206 Lyase FY134_26425 PF10415 Fumarase C C-terminus FY134_26430 PF00701 Dihydrodipicolinate synthetase family FY134_26440 PF00665 Integrase core domain FY134_26445 PF01695 IstB-like ATP binding protein FY134_26450 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY134_26455 PF00005 ABC transporter FY134_26475 PF01053 Cys/Met metabolism PLP-dependent enzyme FY134_26480 PF00392 Bacterial regulatory proteins, gntR family FY134_26480 PF00155 Aminotransferase class I and II FY134_26490 PF00701 Dihydrodipicolinate synthetase family FY134_26495 PF00171 Aldehyde dehydrogenase family FY134_26505 PF01494 FAD binding domain FY134_26515 PF01571 Aminomethyltransferase folate-binding domain FY134_26520 PF02219 Methylenetetrahydrofolate reductase FY134_26525 PF13458 Periplasmic binding protein FY134_26540 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY134_26540 PF00005 ABC transporter FY134_26545 PF00005 ABC transporter FY134_26550 PF00551 Formyl transferase FY134_26565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY134_26565 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY134_26570 PF06505 Activator of aromatic catabolism FY134_26570 PF00158 Sigma-54 interaction domain FY134_26570 PF02830 V4R domain FY134_26570 PF02954 Bacterial regulatory protein, Fis family FY134_26580 PF00440 Bacterial regulatory proteins, tetR family FY134_26580 PF17925 Tetracyclin repressor-like, C-terminal domain FY134_26585 PF01494 FAD binding domain FY134_26590 PF00465 Iron-containing alcohol dehydrogenase FY134_26600 PF00005 ABC transporter FY134_26605 PF00005 ABC transporter FY134_26610 PF02653 Branched-chain amino acid transport system / permease component FY134_26615 PF11862 Domain of unknown function (DUF3382) FY134_26615 PF02653 Branched-chain amino acid transport system / permease component FY134_26620 PF04444 Catechol dioxygenase N terminus FY134_26620 PF00775 Dioxygenase FY134_26635 PF00440 Bacterial regulatory proteins, tetR family FY134_26635 PF16859 Tetracyclin repressor-like, C-terminal domain FY134_26640 PF00561 alpha/beta hydrolase fold FY134_26645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_26645 PF03466 LysR substrate binding domain FY134_26655 PF01494 FAD binding domain FY134_26680 PF00239 Resolvase, N terminal domain FY134_26680 PF02796 Helix-turn-helix domain of resolvase FY134_26685 PF01526 Tn3 transposase DDE domain FY134_26685 PF13700 Domain of unknown function (DUF4158) FY134_26690 PF01266 FAD dependent oxidoreductase FY134_26715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_26715 PF03466 LysR substrate binding domain FY134_26760 PF13298 DNA polymerase Ligase (LigD) FY134_26760 PF01068 ATP dependent DNA ligase domain FY134_26760 PF04679 ATP dependent DNA ligase C terminal region FY134_26775 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY134_26775 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY134_26775 PF14579 Helix-hairpin-helix motif FY134_26775 PF02811 PHP domain FY134_26795 PF05284 Protein of unknown function (DUF736) FY134_26800 PF00589 Phage integrase family FY134_26800 PF13495 Phage integrase, N-terminal SAM-like domain FY134_26815 PF00293 NUDIX domain FY134_26825 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY134_26825 PF05362 Lon protease (S16) C-terminal proteolytic domain FY134_26825 PF00004 ATPase family associated with various cellular activities (AAA) FY134_26830 PF00216 Bacterial DNA-binding protein FY134_26835 PF05406 WGR domain FY134_26845 PF02534 Type IV secretory system Conjugative DNA transfer FY134_26850 PF06412 Conjugal transfer protein TraD FY134_26855 PF07820 TraC-like protein FY134_26860 PF01443 Viral (Superfamily 1) RNA helicase FY134_26860 PF03389 MobA/MobL family FY134_26860 PF17841 BID domain of Bartonella effector protein (Bep) FY134_26865 PF10502 Signal peptidase, peptidase S26 FY134_26870 PF00795 Carbon-nitrogen hydrolase FY134_26875 PF06871 TraH_2 FY134_26880 PF09228 Prokaryotic Transcriptional repressor TraM FY134_26885 PF00196 Bacterial regulatory proteins, luxR family FY134_26885 PF03472 Autoinducer binding domain FY134_26890 PF00005 ABC transporter FY134_26890 PF17912 MalK OB fold domain FY134_26895 PF07944 Beta-L-arabinofuranosidase, GH127 FY134_26900 PF00528 Binding-protein-dependent transport system inner membrane component FY134_26905 PF00528 Binding-protein-dependent transport system inner membrane component FY134_26910 PF01547 Bacterial extracellular solute-binding protein FY134_26915 PF00356 Bacterial regulatory proteins, lacI family FY134_26940 PF01022 Bacterial regulatory protein, arsR family FY134_26945 PF12706 Beta-lactamase superfamily domain FY134_26950 PF00857 Isochorismatase family FY134_26955 PF12833 Helix-turn-helix domain FY134_26955 PF02311 AraC-like ligand binding domain FY134_26960 PF03328 HpcH/HpaI aldolase/citrate lyase family FY134_26975 PF01968 Hydantoinase/oxoprolinase FY134_26975 PF05378 Hydantoinase/oxoprolinase N-terminal region FY134_26980 PF03466 LysR substrate binding domain FY134_26980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_26985 PF00155 Aminotransferase class I and II FY134_26990 PF00005 ABC transporter FY134_26995 PF00005 ABC transporter FY134_26995 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY134_27000 PF02653 Branched-chain amino acid transport system / permease component FY134_27005 PF02653 Branched-chain amino acid transport system / permease component FY134_27010 PF13458 Periplasmic binding protein FY134_27025 PF00171 Aldehyde dehydrogenase family FY134_27030 PF00202 Aminotransferase class-III FY134_27040 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FY134_27040 PF12833 Helix-turn-helix domain FY134_27055 PF03743 Bacterial conjugation TrbI-like protein FY134_27065 PF03524 Conjugal transfer protein FY134_27070 PF04335 VirB8 protein FY134_27075 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY134_27080 PF10907 Protein of unknown function (DUF2749) FY134_27090 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY134_27095 PF05101 Type IV secretory pathway, VirB3-like protein FY134_27100 PF04956 TrbC/VIRB2 family FY134_27105 PF00437 Type II/IV secretion system protein FY134_27110 PF00765 Autoinducer synthase FY134_27115 PF00376 MerR family regulatory protein FY134_27115 PF13614 AAA domain FY134_27120 PF07506 RepB plasmid partitioning protein FY134_27120 PF02195 ParB-like nuclease domain FY134_27125 PF03428 Replication protein C N-terminal domain FY134_27125 PF11800 Replication protein C C-terminal region FY134_27130 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY134_27130 PF05362 Lon protease (S16) C-terminal proteolytic domain FY134_27130 PF00004 ATPase family associated with various cellular activities (AAA) FY134_27135 PF07687 Peptidase dimerisation domain FY134_27135 PF01546 Peptidase family M20/M25/M40 FY134_27165 PF11972 HTH DNA binding domain FY134_27165 PF07756 Protein of unknown function (DUF1612) FY134_27200 PF02463 RecF/RecN/SMC N terminal domain FY134_27235 PF16701 Adenylate cyclase regulatory domain FY134_27235 PF00211 Adenylate and Guanylate cyclase catalytic domain FY134_27245 PF01381 Helix-turn-helix FY134_27250 PF13657 HipA N-terminal domain FY134_27250 PF07804 HipA-like C-terminal domain FY134_27280 PF02954 Bacterial regulatory protein, Fis family FY134_27280 PF00158 Sigma-54 interaction domain FY134_27280 PF00072 Response regulator receiver domain FY134_27285 PF13188 PAS domain FY134_27285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY134_27285 PF00512 His Kinase A (phospho-acceptor) domain FY134_27285 PF08448 PAS fold FY134_27285 PF00072 Response regulator receiver domain FY134_27290 PF03150 Di-haem cytochrome c peroxidase FY134_27290 PF00034 Cytochrome c FY134_27290 PF14376 Haem-binding domain FY134_27300 PF00111 2Fe-2S iron-sulfur cluster binding domain FY134_27300 PF00970 Oxidoreductase FAD-binding domain FY134_27300 PF00175 Oxidoreductase NAD-binding domain FY134_27305 PF03466 LysR substrate binding domain FY134_27305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_27310 PF03466 LysR substrate binding domain FY134_27310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY134_27315 PF01638 HxlR-like helix-turn-helix FY134_27330 PF00486 Transcriptional regulatory protein, C terminal FY134_27330 PF00072 Response regulator receiver domain FY134_27335 PF01464 Transglycosylase SLT domain FY134_27335 PF10145 Phage-related minor tail protein FY134_27335 PF01551 Peptidase family M23 FY134_27350 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY134_27375 PF03743 Bacterial conjugation TrbI-like protein FY134_27380 PF00437 Type II/IV secretion system protein FY134_27390 PF07181 VirC2 protein FY134_27395 PF07015 VirC1 protein FY134_27400 PF02534 Type IV secretory system Conjugative DNA transfer FY134_27405 PF03432 Relaxase/Mobilisation nuclease domain FY134_27410 PF07328 T-DNA border endonuclease VirD1 FY134_27505 PF05717 IS66 Orf2 like protein FY134_27515 PF00480 ROK family FY134_27520 PF13416 Bacterial extracellular solute-binding protein FY134_27525 PF00528 Binding-protein-dependent transport system inner membrane component FY134_27530 PF00528 Binding-protein-dependent transport system inner membrane component FY134_27545 PF17912 MalK OB fold domain FY134_27545 PF00005 ABC transporter FY134_27550 PF01380 SIS domain FY134_27560 PF02690 Na+/Pi-cotransporter FY134_27570 PF05406 WGR domain FY134_27575 PF02534 Type IV secretory system Conjugative DNA transfer FY134_27580 PF06412 Conjugal transfer protein TraD FY134_27585 PF07820 TraC-like protein FY134_27590 PF01443 Viral (Superfamily 1) RNA helicase FY134_27590 PF17841 BID domain of Bartonella effector protein (Bep) FY134_27590 PF03389 MobA/MobL family FY134_27595 PF10502 Signal peptidase, peptidase S26 FY134_27600 PF00795 Carbon-nitrogen hydrolase FY134_27605 PF06871 TraH_2 FY134_27610 PF09228 Prokaryotic Transcriptional repressor TraM FY134_27615 PF03472 Autoinducer binding domain FY134_27615 PF00196 Bacterial regulatory proteins, luxR family FY134_27630 PF01494 FAD binding domain FY134_27645 PF03743 Bacterial conjugation TrbI-like protein FY134_27655 PF03524 Conjugal transfer protein FY134_27660 PF04335 VirB8 protein FY134_27665 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY134_27680 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY134_27685 PF05101 Type IV secretory pathway, VirB3-like protein FY134_27690 PF04956 TrbC/VIRB2 family FY134_27695 PF00437 Type II/IV secretion system protein FY134_27700 PF00765 Autoinducer synthase