Atu0001 PF03618 Atu0001 Atu0002 PF02545 Maf-like protein Atu0003 PF01488 Shikimate / quinate 5-dehydrogenase Atu0003 PF08501 Shikimate dehydrogenase substrate binding domain Atu0004 PF01121 Dephospho-CoA kinase Atu0005 PF00929 Exonuclease Atu0006 PF02556 Preprotein translocase subunit SecB Atu0007 PF04186 Atu0007 Atu0008 PF04280 Tim44-like domain Atu0009 PF03562 MltA specific insert domain Atu0009 PF06725 3D domain Atu0010 PF01713 Smr domain Atu0011 PF01381 Helix-turn-helix Atu0012 PF00204 DNA gyrase B Atu0012 PF00986 DNA gyrase B subunit, carboxyl terminus Atu0012 PF01751 Toprim domain Atu0012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0013 PF00881 Nitroreductase family Atu0014 PF01557 Fumarylacetoacetate (FAA) hydrolase family Atu0015 PF06850 Atu0015 Atu0016 PF01863 Protein of unknown function DUF45 Atu0017 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Atu0018 PF00291 Pyridoxal-phosphate dependent enzyme Atu0019 PF00290 Tryptophan synthase alpha chain Atu0020 PF01039 Carboxyl transferase domain Atu0021 PF08245 Mur ligase middle domain Atu0022 PF00085 Thioredoxin Atu0023 PF00580 UvrD/REP helicase N-terminal domain Atu0023 PF12705 PD-(D/E)XK nuclease superfamily Atu0023 PF13361 UvrD-like helicase C-terminal domain Atu0024 PF12705 PD-(D/E)XK nuclease superfamily Atu0025 PF12804 MobA-like NTP transferase domain Atu0026 PF01636 Phosphotransferase enzyme family Atu0026 PF02367 Uncharacterised P-loop hydrolase UPF0079 Atu0027 PF00512 His Kinase A (phospho-acceptor) domain Atu0027 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0027 PF12860 Atu0027 Atu0029 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Atu0029 PF05221 S-adenosyl-L-homocysteine hydrolase Atu0030 PF00381 PTS HPr component phosphorylation site Atu0031 PF03610 PTS system fructose IIA component Atu0032 PF07475 HPr Serine kinase C-terminal domain Atu0033 PF00512 His Kinase A (phospho-acceptor) domain Atu0033 PF00672 HAMP domain Atu0033 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0033 PF13755 Atu0033 Atu0033 PF13756 Atu0033 Atu0034 PF00072 Response regulator receiver domain Atu0034 PF00486 Transcriptional regulatory protein, C terminal Atu0035 PF01293 Phosphoenolpyruvate carboxykinase Atu0036 PF00472 RF-1 domain Atu0037 PF00485 Phosphoribulokinase / Uridine kinase family Atu0038 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Atu0039 PF00977 Histidine biosynthesis protein Atu0040 PF00977 Histidine biosynthesis protein Atu0041 PF00117 Glutamine amidotransferase class-I Atu0043 PF00475 Imidazoleglycerol-phosphate dehydratase Atu0044 PF00227 Proteasome subunit Atu0045 PF00004 ATPase family associated with various cellular activities (AAA) Atu0045 PF07724 AAA domain (Cdc48 subfamily) Atu0045 PF10431 C-terminal, D2-small domain, of ClpB protein Atu0046 PF07182 Atu0046 Atu0047 PF01274 Malate synthase Atu0048 PF03734 L,D-transpeptidase catalytic domain Atu0049 PF06319 Protein of unknown function (DUF1052) Atu0050 PF00072 Response regulator receiver domain Atu0050 PF02954 Bacterial regulatory protein, Fis family Atu0051 PF00512 His Kinase A (phospho-acceptor) domain Atu0051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0052 PF00270 DEAD/DEAH box helicase Atu0052 PF00271 Helicase conserved C-terminal domain Atu0052 PF04408 Helicase associated domain (HA2) Atu0052 PF08482 Atu0052 Atu0061 PF00270 DEAD/DEAH box helicase Atu0061 PF00271 Helicase conserved C-terminal domain Atu0061 PF00570 HRDC domain Atu0061 PF09382 RQC domain Atu0061 PF16124 Atu0061 Atu0062 PF00480 ROK family Atu0062 PF13412 Winged helix-turn-helix DNA-binding Atu0063 PF13407 Periplasmic binding protein domain Atu0064 PF02653 Atu0064 Atu0065 PF00005 ABC transporter Atu0066 PF00485 Phosphoribulokinase / Uridine kinase family Atu0068 PF00462 Glutaredoxin Atu0069 PF07972 NrdI Flavodoxin like Atu0070 PF00317 Ribonucleotide reductase, all-alpha domain Atu0070 PF02867 Ribonucleotide reductase, barrel domain Atu0070 PF08343 Ribonucleotide reductase N-terminal Atu0071 PF00268 Ribonucleotide reductase, small chain Atu0072 PF05990 Alpha/beta hydrolase of unknown function (DUF900) Atu0073 PF02463 RecF/RecN/SMC N terminal domain Atu0074 PF00899 ThiF family Atu0075 PF00583 Acetyltransferase (GNAT) family Atu0077 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atu0077 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu0078 PF06347 Bacterial SH3 domain Atu0079 PF00294 pfkB family carbohydrate kinase Atu0080 PF03547 Atu0080 Atu0081 PF05175 Methyltransferase small domain Atu0082 PF00013 KH domain Atu0082 PF00575 S1 RNA binding domain Atu0082 PF01138 3' exoribonuclease family, domain 1 Atu0082 PF03725 3' exoribonuclease family, domain 2 Atu0082 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Atu0084 PF00312 Ribosomal protein S15 Atu0085 PF01509 TruB family pseudouridylate synthase (N terminal domain) Atu0085 PF09157 Pseudouridine synthase II TruB, C-terminal Atu0085 PF16198 Atu0085 Atu0086 PF02033 Ribosome-binding factor A Atu0087 PF00009 Elongation factor Tu GTP binding domain Atu0087 PF03144 Elongation factor Tu domain 2 Atu0087 PF04760 Translation initiation factor IF-2, N-terminal region Atu0087 PF08364 Atu0087 Atu0087 PF11987 Translation-initiation factor 2 Atu0088 PF04296 Protein of unknown function (DUF448) Atu0089 PF00575 S1 RNA binding domain Atu0089 PF08529 NusA N-terminal domain Atu0089 PF13184 NusA-like KH domain Atu0089 PF14520 Helix-hairpin-helix domain Atu0090 PF02576 Uncharacterised BCR, YhbC family COG0779 Atu0090 PF17384 Atu0090 Atu0091 PF05977 Transmembrane secretion effector Atu0092 PF01471 Putative peptidoglycan binding domain Atu0092 PF13406 Transglycosylase SLT domain Atu0093 PF02132 RecR protein Atu0093 PF13662 Toprim domain Atu0094 PF03473 MOSC domain Atu0095 PF02575 YbaB/EbfC DNA-binding family Atu0096 PF12169 DNA polymerase III subunits gamma and tau domain III Atu0096 PF12362 Atu0096 Atu0096 PF13177 DNA polymerase III, delta subunit Atu0097 PF01230 HIT domain Atu0098 PF00293 NUDIX domain Atu0098 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Atu0098 PF09297 NADH pyrophosphatase zinc ribbon domain Atu0099 PF00800 Prephenate dehydratase Atu0100 PF02348 Cytidylyltransferase Atu0101 PF00034 Cytochrome c Atu0102 PF02397 Atu0102 Atu0103 PF00905 Penicillin binding protein transpeptidase domain Atu0103 PF00912 Transglycosylase Atu0104 PF04073 Aminoacyl-tRNA editing domain Atu0106 PF00313 'Cold-shock' DNA-binding domain Atu0108 PF01546 Peptidase family M20/M25/M40 Atu0108 PF07687 Peptidase dimerisation domain Atu0109 PF01047 MarR family Atu0110 PF00476 DNA polymerase family A Atu0110 PF01367 5'-3' exonuclease, C-terminal SAM fold Atu0110 PF01612 3'-5' exonuclease Atu0110 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Atu0111 PF08975 Domain of unknown function (DUF1868) Atu0112 PF01783 Ribosomal L32p protein family Atu0113 PF00512 His Kinase A (phospho-acceptor) domain Atu0113 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0113 PF02743 Cache domain Atu0114 PF00072 Response regulator receiver domain Atu0114 PF00158 Sigma-54 interaction domain Atu0114 PF02954 Bacterial regulatory protein, Fis family Atu0116 PF03401 Tripartite tricarboxylate transporter family receptor Atu0117 PF07331 Atu0117 Atu0118 PF01970 Atu0118 Atu0119 PF04102 SlyX Atu0120 PF06041 Bacterial protein of unknown function (DUF924) Atu0121 PF00226 DnaJ domain Atu0121 PF00684 DnaJ central domain Atu0121 PF01556 DnaJ C terminal domain Atu0122 PF00012 Hsp70 protein Atu0125 PF01625 Peptide methionine sulfoxide reductase Atu0126 PF02608 Basic membrane protein Atu0127 PF00005 ABC transporter Atu0128 PF02653 Atu0128 Atu0129 PF02653 Atu0129 Atu0130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Atu0131 PF01048 Phosphorylase superfamily Atu0132 PF01791 DeoC/LacD family aldolase Atu0133 PF00591 Glycosyl transferase family, a/b domain Atu0133 PF02885 Glycosyl transferase family, helical bundle domain Atu0133 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Atu0134 PF13975 Atu0134 Atu0135 PF14681 Uracil phosphoribosyltransferase Atu0136 PF00962 Adenosine/AMP deaminase Atu0137 PF01676 Metalloenzyme superfamily Atu0138 PF02104 Atu0138 Atu0139 PF03626 Atu0139 Atu0140 PF00510 Cytochrome c oxidase subunit III Atu0141 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atu0142 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Atu0142 PF06481 COX Aromatic Rich Motif Atu0143 PF00083 Sugar (and other) transporter Atu0145 PF00310 Glutamine amidotransferases class-II Atu0145 PF01493 GXGXG motif Atu0145 PF01645 Conserved region in glutamate synthase Atu0145 PF04898 Glutamate synthase central domain Atu0146 PF00175 Oxidoreductase NAD-binding domain Atu0146 PF00258 Flavodoxin Atu0146 PF00667 FAD binding domain Atu0147 PF07811 Atu0147 Atu0148 PF07811 Atu0148 Atu0149 PF13561 Enoyl-(Acyl carrier protein) reductase Atu0150 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu0150 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu0151 PF07977 FabA-like domain Atu0153 PF01475 Ferric uptake regulator family Atu0154 PF03458 Atu0154 Atu0156 PF06912 Atu0156 Atu0157 PF09084 NMT1/THI5 like Atu0158 PF00528 Binding-protein-dependent transport system inner membrane component Atu0159 PF00005 ABC transporter Atu0160 PF00392 Bacterial regulatory proteins, gntR family Atu0160 PF07702 UTRA domain Atu0161 PF01618 Atu0161 Atu0162 PF02472 Biopolymer transport protein ExbD/TolR Atu0163 PF13103 TonB C terminal Atu0164 PF02615 Malate/L-lactate dehydrogenase Atu0165 PF00196 Bacterial regulatory proteins, luxR family Atu0167 PF12625 Atu0167 Atu0167 PF12833 Helix-turn-helix domain Atu0168 PF00625 Guanylate kinase Atu0169 PF01979 Amidohydrolase family Atu0170 PF06299 Atu0170 Atu0171 PF00528 Binding-protein-dependent transport system inner membrane component Atu0172 PF00528 Binding-protein-dependent transport system inner membrane component Atu0173 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein Atu0174 PF00005 ABC transporter Atu0175 PF00132 Bacterial transferase hexapeptide (six repeats) Atu0176 PF00005 ABC transporter Atu0177 PF00005 ABC transporter Atu0178 PF06007 Atu0178 Atu0179 PF05861 Atu0179 Atu0180 PF05845 Bacterial phosphonate metabolism protein (PhnH) Atu0181 PF06754 Atu0181 Atu0182 PF00392 Bacterial regulatory proteins, gntR family Atu0182 PF07702 UTRA domain Atu0183 PF01113 Dihydrodipicolinate reductase, N-terminus Atu0183 PF05173 Dihydrodipicolinate reductase, C-terminus Atu0184 PF02685 Glucokinase Atu0185 PF02142 MGS-like domain Atu0186 PF03411 Penicillin-insensitive murein endopeptidase Atu0187 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu0188 PF00528 Binding-protein-dependent transport system inner membrane component Atu0189 PF00528 Binding-protein-dependent transport system inner membrane component Atu0189 PF12911 Atu0189 Atu0190 PF00005 ABC transporter Atu0190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu0193 PF00120 Glutamine synthetase, catalytic domain Atu0194 PF01266 FAD dependent oxidoreductase Atu0195 PF01202 Shikimate kinase Atu0196 PF00528 Binding-protein-dependent transport system inner membrane component Atu0197 PF00005 ABC transporter Atu0198 PF00528 Binding-protein-dependent transport system inner membrane component Atu0199 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu0200 PF05145 Atu0200 Atu0201 PF02082 Transcriptional regulator Atu0202 PF13343 Bacterial extracellular solute-binding protein Atu0203 PF01435 Peptidase family M48 Atu0204 PF05987 Atu0204 Atu0205 PF00171 Aldehyde dehydrogenase family Atu0206 PF03992 Antibiotic biosynthesis monooxygenase Atu0207 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0207 PF03466 LysR substrate binding domain Atu0208 PF00892 EamA-like transporter family Atu0209 PF04332 Atu0209 Atu0210 PF12802 MarR family Atu0211 PF00877 NlpC/P60 family Atu0213 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Atu0214 PF00883 Cytosol aminopeptidase family, catalytic domain Atu0215 PF13414 TPR repeat Atu0215 PF14559 Tetratricopeptide repeat Atu0216 PF00482 Type II secretion system (T2SS), protein F Atu0217 PF00482 Type II secretion system (T2SS), protein F Atu0218 PF00437 Type II/IV secretion system protein Atu0220 PF09476 Atu0220 Atu0221 PF00263 Atu0221 Atu0221 PF04972 BON domain Atu0221 PF13629 Atu0221 Atu0222 PF08666 SAF domain Atu0222 PF16976 Atu0222 Atu0223 PF01478 Type IV leader peptidase family Atu0224 PF04964 Atu0224 Atu0226 PF13629 Atu0226 Atu0228 PF10262 Rdx family Atu0229 PF07681 Atu0229 Atu0231 PF00117 Glutamine amidotransferase class-I Atu0232 PF07411 Domain of unknown function (DUF1508) Atu0233 PF01183 Glycosyl hydrolases family 25 Atu0234 PF00892 EamA-like transporter family Atu0235 PF00155 Aminotransferase class I and II Atu0235 PF00392 Bacterial regulatory proteins, gntR family Atu0237 PF02082 Transcriptional regulator Atu0238 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu0239 PF02311 AraC-like ligand binding domain Atu0239 PF12833 Helix-turn-helix domain Atu0240 PF09391 Protein of unknown function (DUF2000) Atu0241 PF00009 Elongation factor Tu GTP binding domain Atu0241 PF00679 Elongation factor G C-terminus Atu0241 PF03144 Elongation factor Tu domain 2 Atu0241 PF06421 GTP-binding protein LepA C-terminus Atu0242 PF00795 Carbon-nitrogen hydrolase Atu0243 PF00583 Acetyltransferase (GNAT) family Atu0245 PF01381 Helix-turn-helix Atu0245 PF07883 Cupin domain Atu0246 PF13673 Acetyltransferase (GNAT) domain Atu0248 PF12833 Helix-turn-helix domain Atu0249 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu0251 PF02915 Rubrerythrin Atu0252 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP Atu0253 PF12697 Alpha/beta hydrolase family Atu0254 PF00707 Translation initiation factor IF-3, C-terminal domain Atu0254 PF05198 Translation initiation factor IF-3, N-terminal domain Atu0255 PF01632 Ribosomal protein L35 Atu0256 PF00453 Ribosomal protein L20 Atu0257 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family Atu0258 PF01409 tRNA synthetases class II core domain (F) Atu0258 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Atu0259 PF01588 Putative tRNA binding domain Atu0259 PF03147 Ferredoxin-fold anticodon binding domain Atu0259 PF03483 B3/4 domain Atu0259 PF03484 tRNA synthetase B5 domain Atu0260 PF00248 Aldo/keto reductase family Atu0261 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0261 PF03466 LysR substrate binding domain Atu0262 PF00583 Acetyltransferase (GNAT) family Atu0263 PF00248 Aldo/keto reductase family Atu0264 PF01965 DJ-1/PfpI family Atu0264 PF12833 Helix-turn-helix domain Atu0265 PF00857 Isochorismatase family Atu0266 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu0269 PF02601 Atu0269 Atu0269 PF13742 Atu0269 Atu0270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu0270 PF13378 Enolase C-terminal domain-like Atu0271 PF00392 Bacterial regulatory proteins, gntR family Atu0271 PF07729 FCD domain Atu0272 PF01047 MarR family Atu0273 PF00892 EamA-like transporter family Atu0274 PF02073 Thermophilic metalloprotease (M29) Atu0275 PF04073 Aminoacyl-tRNA editing domain Atu0276 PF03960 ArsC family Atu0278 PF02834 LigT like Phosphoesterase Atu0279 PF00440 Bacterial regulatory proteins, tetR family Atu0281 PF00117 Glutamine amidotransferase class-I Atu0281 PF00958 GMP synthase C terminal domain Atu0281 PF03054 tRNA methyl transferase Atu0282 PF01048 Phosphorylase superfamily Atu0283 PF03061 Thioesterase superfamily Atu0284 PF03073 TspO/MBR family Atu0285 PF07433 Atu0285 Atu0286 PF09375 Imelysin Atu0287 PF06537 Atu0287 Atu0288 PF09375 Imelysin Atu0289 PF01189 NOL1/NOP2/sun family Atu0290 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Atu0291 PF01370 NAD dependent epimerase/dehydratase family Atu0292 PF08331 Atu0292 Atu0292 PF13484 Atu0292 Atu0293 PF13417 Glutathione S-transferase, N-terminal domain Atu0293 PF14497 Glutathione S-transferase, C-terminal domain Atu0294 PF02673 Atu0294 Atu0296 PF01370 NAD dependent epimerase/dehydratase family Atu0297 PF07045 Protein of unknown function (DUF1330) Atu0298 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Atu0299 PF00300 Histidine phosphatase superfamily (branch 1) Atu0300 PF13649 Methyltransferase domain Atu0301 PF00712 DNA polymerase III beta subunit, N-terminal domain Atu0301 PF02767 DNA polymerase III beta subunit, central domain Atu0301 PF02768 DNA polymerase III beta subunit, C-terminal domain Atu0302 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu0303 PF02021 Uncharacterised protein family UPF0102 Atu0304 PF12464 Maltose acetyltransferase Atu0304 PF14602 Hexapeptide repeat of succinyl-transferase Atu0305 PF13416 Bacterial extracellular solute-binding protein Atu0306 PF00528 Binding-protein-dependent transport system inner membrane component Atu0307 PF00528 Binding-protein-dependent transport system inner membrane component Atu0308 PF00005 ABC transporter Atu0309 PF05899 Protein of unknown function (DUF861) Atu0310 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Atu0310 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Atu0311 PF01078 Magnesium chelatase, subunit ChlI Atu0311 PF13335 Atu0311 Atu0311 PF13541 Subunit ChlI of Mg-chelatase Atu0312 PF00291 Pyridoxal-phosphate dependent enzyme Atu0313 PF01810 Atu0313 Atu0314 PF00692 dUTPase Atu0315 PF00009 Elongation factor Tu GTP binding domain Atu0315 PF03144 Elongation factor Tu domain 2 Atu0315 PF16658 Atu0315 Atu0316 PF02441 Flavoprotein Atu0316 PF04127 DNA / pantothenate metabolism flavoprotein Atu0317 PF04237 YjbR Atu0318 PF04116 Atu0318 Atu0319 PF03109 Atu0319 Atu0320 PF01209 ubiE/COQ5 methyltransferase family Atu0321 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Atu0321 PF06827 Zinc finger found in FPG and IleRS Atu0321 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Atu0322 PF00378 Enoyl-CoA hydratase/isomerase family Atu0323 PF01649 Ribosomal protein S20 Atu0324 PF00308 Bacterial dnaA protein Atu0324 PF08299 Bacterial dnaA protein helix-turn-helix Atu0324 PF11638 DnaA N-terminal domain Atu0325 PF04055 Radical SAM superfamily Atu0325 PF06969 HemN C-terminal domain Atu0326 PF01725 Ham1 family Atu0327 PF01138 3' exoribonuclease family, domain 1 Atu0327 PF03725 3' exoribonuclease family, domain 2 Atu0328 PF01628 HrcA protein C terminal domain Atu0329 PF01025 GrpE Atu0330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Atu0331 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Atu0331 PF16321 Atu0331 Atu0332 PF00309 Atu0332 Atu0332 PF04552 Sigma-54, DNA binding domain Atu0332 PF04963 Sigma-54 factor, core binding domain Atu0333 PF00005 ABC transporter Atu0333 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu0334 PF03968 OstA-like protein Atu0335 PF06835 Lipopolysaccharide-assembly, LptC-related Atu0337 PF01343 Peptidase family S49 Atu0338 PF00216 Bacterial DNA-binding protein Atu0340 PF10672 S-adenosylmethionine-dependent methyltransferase Atu0341 PF00588 SpoU rRNA Methylase family Atu0341 PF08032 RNA 2'-O ribose methyltransferase substrate binding Atu0342 PF01252 Atu0342 Atu0343 PF00072 Response regulator receiver domain Atu0343 PF00512 His Kinase A (phospho-acceptor) domain Atu0343 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0344 PF13444 Acetyltransferase (GNAT) domain Atu0345 PF00488 MutS domain V Atu0345 PF01624 MutS domain I Atu0345 PF05188 MutS domain II Atu0345 PF05190 MutS family domain IV Atu0345 PF05192 MutS domain III Atu0346 PF01842 ACT domain Atu0346 PF01909 Nucleotidyltransferase domain Atu0346 PF01966 HD domain Atu0346 PF08335 GlnD PII-uridylyltransferase Atu0347 PF03023 Atu0347 Atu0348 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0349 PF00579 tRNA synthetases class I (W and Y) Atu0351 PF01106 NifU-like domain Atu0351 PF08712 Scaffold protein Nfu/NifU N terminal Atu0352 PF00814 Glycoprotease family Atu0353 PF00583 Acetyltransferase (GNAT) family Atu0354 PF01475 Ferric uptake regulator family Atu0355 PF01553 Acyltransferase Atu0356 PF00919 Uncharacterized protein family UPF0004 Atu0356 PF01938 TRAM domain Atu0356 PF04055 Radical SAM superfamily Atu0357 PF02562 PhoH-like protein Atu0358 PF02130 Uncharacterized protein family UPF0054 Atu0359 PF00571 CBS domain Atu0359 PF03471 Transporter associated domain Atu0360 PF00795 Carbon-nitrogen hydrolase Atu0361 PF01381 Helix-turn-helix Atu0362 PF00438 S-adenosylmethionine synthetase, N-terminal domain Atu0362 PF02772 S-adenosylmethionine synthetase, central domain Atu0362 PF02773 S-adenosylmethionine synthetase, C-terminal domain Atu0363 PF02390 Putative methyltransferase Atu0364 PF00294 pfkB family carbohydrate kinase Atu0365 PF02646 Atu0365 Atu0366 PF01327 Polypeptide deformylase Atu0367 PF00551 Formyl transferase Atu0367 PF02911 Formyl transferase, C-terminal domain Atu0368 PF01416 tRNA pseudouridine synthase Atu0370 PF01546 Peptidase family M20/M25/M40 Atu0370 PF07687 Peptidase dimerisation domain Atu0371 PF00132 Bacterial transferase hexapeptide (six repeats) Atu0371 PF14602 Hexapeptide repeat of succinyl-transferase Atu0371 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Atu0372 PF03641 Possible lysine decarboxylase Atu0373 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0373 PF02743 Cache domain Atu0374 PF01156 Inosine-uridine preferring nucleoside hydrolase Atu0375 PF00011 Hsp20/alpha crystallin family Atu0376 PF06620 Atu0376 Atu0377 PF13202 EF hand Atu0378 PF13419 Haloacid dehalogenase-like hydrolase Atu0379 PF00892 EamA-like transporter family Atu0380 PF00696 Amino acid kinase family Atu0383 PF01926 50S ribosome-binding GTPase Atu0384 PF02096 60Kd inner membrane protein Atu0384 PF14849 YidC periplasmic domain Atu0385 PF00825 Ribonuclease P Atu0387 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0387 PF00672 HAMP domain Atu0388 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0390 PF08241 Methyltransferase domain Atu0391 PF00005 ABC transporter Atu0392 PF00528 Binding-protein-dependent transport system inner membrane component Atu0393 PF00528 Binding-protein-dependent transport system inner membrane component Atu0394 PF13416 Bacterial extracellular solute-binding protein Atu0395 PF00149 Calcineurin-like phosphoesterase Atu0396 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Atu0396 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Atu0397 PF05990 Alpha/beta hydrolase of unknown function (DUF900) Atu0398 PF05544 Proline racemase Atu0399 PF01979 Amidohydrolase family Atu0400 PF00156 Phosphoribosyl transferase domain Atu0401 PF00294 pfkB family carbohydrate kinase Atu0402 PF05448 Acetyl xylan esterase (AXE1) Atu0403 PF00756 Putative esterase Atu0404 PF00342 Phosphoglucose isomerase Atu0405 PF00501 AMP-binding enzyme Atu0405 PF13193 AMP-binding enzyme C-terminal domain Atu0406 PF00005 ABC transporter Atu0407 PF13343 Bacterial extracellular solute-binding protein Atu0408 PF00528 Binding-protein-dependent transport system inner membrane component Atu0409 PF00593 TonB dependent receptor Atu0409 PF07715 TonB-dependent Receptor Plug Domain Atu0410 PF12833 Helix-turn-helix domain Atu0413 PF01679 Atu0413 Atu0415 PF03060 Nitronate monooxygenase Atu0418 PF03976 Polyphosphate kinase 2 (PPK2) Atu0419 PF00512 His Kinase A (phospho-acceptor) domain Atu0419 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0420 PF12849 PBP superfamily domain Atu0421 PF00528 Binding-protein-dependent transport system inner membrane component Atu0421 PF12501 Atu0421 Atu0422 PF00528 Binding-protein-dependent transport system inner membrane component Atu0422 PF11812 Atu0422 Atu0423 PF00005 ABC transporter Atu0424 PF01895 PhoU domain Atu0425 PF00072 Response regulator receiver domain Atu0425 PF00486 Transcriptional regulatory protein, C terminal Atu0428 PF00202 Aminotransferase class-III Atu0429 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Atu0429 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Atu0430 PF01430 Hsp33 protein Atu0431 PF04379 Protein of unknown function (DUF525) Atu0432 PF01053 Cys/Met metabolism PLP-dependent enzyme Atu0434 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) Atu0436 PF13538 UvrD-like helicase C-terminal domain Atu0437 PF10053 Atu0437 Atu0438 PF00589 Phage integrase family Atu0443 PF00717 Peptidase S24-like Atu0443 PF01381 Helix-turn-helix Atu0444 PF15943 Atu0444 Atu0449 PF13730 Atu0449 Atu0450 PF02357 Transcription termination factor nusG Atu0454 PF04717 Phage-related baseplate assembly protein Atu0460 PF05489 Phage Tail Protein X Atu0461 PF05954 Phage late control gene D protein (GPD) Atu0462 PF13539 D-alanyl-D-alanine carboxypeptidase Atu0464 PF16083 Atu0464 Atu0465 PF13560 Helix-turn-helix domain Atu0466 PF14076 Atu0466 Atu0470 PF07369 Protein of unknown function (DUF1488) Atu0472 PF02469 Fasciclin domain Atu0473 PF14339 Atu0473 Atu0474 PF04542 Sigma-70 region 2 Atu0474 PF08281 Sigma-70, region 4 Atu0475 PF10099 Atu0475 Atu0476 PF00230 Major intrinsic protein Atu0478 PF13632 Glycosyl transferase family group 2 Atu0479 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu0480 PF01943 Atu0480 Atu0481 PF04932 Atu0481 Atu0482 PF01522 Polysaccharide deacetylase Atu0483 PF00717 Peptidase S24-like Atu0484 PF00072 Response regulator receiver domain Atu0484 PF00196 Bacterial regulatory proteins, luxR family Atu0485 PF06108 Protein of unknown function (DUF952) Atu0486 PF01180 Dihydroorotate dehydrogenase Atu0489 PF13489 Methyltransferase domain Atu0490 PF02588 Atu0490 Atu0491 PF02588 Atu0491 Atu0492 PF02627 Carboxymuconolactone decarboxylase family Atu0493 PF02082 Transcriptional regulator Atu0494 PF00270 DEAD/DEAH box helicase Atu0494 PF00271 Helicase conserved C-terminal domain Atu0494 PF08494 Atu0494 Atu0495 PF00149 Calcineurin-like phosphoesterase Atu0496 PF00582 Universal stress protein family Atu0498 PF01925 Atu0498 Atu0499 PF01471 Putative peptidoglycan binding domain Atu0499 PF08238 Sel1 repeat Atu0501 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu0501 PF02770 Acyl-CoA dehydrogenase, middle domain Atu0501 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu0501 PF12418 Atu0501 Atu0501 PF12806 Atu0501 Atu0502 PF00108 Thiolase, N-terminal domain Atu0502 PF02803 Thiolase, C-terminal domain Atu0503 PF00378 Enoyl-CoA hydratase/isomerase family Atu0503 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Atu0503 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Atu0506 PF13532 2OG-Fe(II) oxygenase superfamily Atu0507 PF03334 Atu0507 Atu0508 PF04066 Atu0508 Atu0509 PF01899 Atu0509 Atu0510 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu0511 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atu0514 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0514 PF11563 Protoglobin Atu0515 PF13466 STAS domain Atu0516 PF00072 Response regulator receiver domain Atu0517 PF01584 CheW-like domain Atu0517 PF01627 Hpt domain Atu0517 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0517 PF02895 Signal transducing histidine kinase, homodimeric domain Atu0518 PF01739 CheR methyltransferase, SAM binding domain Atu0518 PF03705 CheR methyltransferase, all-alpha domain Atu0519 PF00072 Response regulator receiver domain Atu0519 PF01339 CheB methylesterase Atu0520 PF00072 Response regulator receiver domain Atu0521 PF03975 CheD chemotactic sensory transduction Atu0523 PF01514 Secretory protein of YscJ/FliF family Atu0523 PF08345 Atu0523 Atu0524 PF00196 Bacterial regulatory proteins, luxR family Atu0525 PF00196 Bacterial regulatory proteins, luxR family Atu0526 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0526 PF00672 HAMP domain Atu0526 PF17201 Atu0526 Atu0527 PF00072 Response regulator receiver domain Atu0527 PF00512 His Kinase A (phospho-acceptor) domain Atu0527 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0527 PF12860 Atu0527 Atu0528 PF01741 Large-conductance mechanosensitive channel, MscL Atu0529 PF00155 Aminotransferase class I and II Atu0530 PF01370 NAD dependent epimerase/dehydratase family Atu0533 PF02545 Maf-like protein Atu0534 PF01176 Translation initiation factor 1A / IF-1 Atu0535 PF01451 Low molecular weight phosphotyrosine protein phosphatase Atu0536 PF06793 Atu0536 Atu0537 PF00815 Histidinol dehydrogenase Atu0538 PF11164 Atu0538 Atu0539 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Atu0542 PF00669 Bacterial flagellin N-terminal helical region Atu0542 PF00700 Bacterial flagellin C-terminal helical region Atu0543 PF00669 Bacterial flagellin N-terminal helical region Atu0543 PF00700 Bacterial flagellin C-terminal helical region Atu0545 PF00669 Bacterial flagellin N-terminal helical region Atu0545 PF00700 Bacterial flagellin C-terminal helical region Atu0546 PF00813 Atu0546 Atu0547 PF03748 Atu0547 Atu0548 PF02107 Atu0548 Atu0550 PF02119 Atu0550 Atu0551 PF13144 SAF-like Atu0552 PF00460 Flagella basal body rod protein Atu0552 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0553 PF02049 Atu0553 Atu0554 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0555 PF00460 Flagella basal body rod protein Atu0557 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atu0558 PF00460 Flagella basal body rod protein Atu0558 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0559 PF06748 Protein of unknown function (DUF1217) Atu0560 PF01618 Atu0560 Atu0561 PF01052 Surface presentation of antigens (SPOA) Atu0562 PF01052 Surface presentation of antigens (SPOA) Atu0563 PF01706 FliG C-terminal domain Atu0563 PF14841 FliG middle domain Atu0563 PF14842 FliG N-terminal domain Atu0564 PF01312 FlhB HrpN YscU SpaS Family Atu0567 PF00669 Bacterial flagellin N-terminal helical region Atu0567 PF00700 Bacterial flagellin C-terminal helical region Atu0569 PF00691 OmpA family Atu0569 PF13677 Atu0569 Atu0571 PF02120 Flagellar hook-length control protein FliK Atu0572 PF01464 Transglycosylase SLT domain Atu0573 PF00486 Transcriptional regulatory protein, C terminal Atu0574 PF00460 Flagella basal body rod protein Atu0574 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0574 PF07559 Flagellar basal body protein FlaE Atu0575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0576 PF00669 Bacterial flagellin N-terminal helical region Atu0576 PF00700 Bacterial flagellin C-terminal helical region Atu0577 PF07309 Atu0577 Atu0578 PF07378 Atu0578 Atu0579 PF03963 Atu0579 Atu0580 PF01313 Atu0580 Atu0581 PF00771 FHIPEP family Atu0582 PF01311 Atu0582 Atu0584 PF10135 Atu0584 Atu0587 PF03808 Atu0587 Atu0589 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Atu0589 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Atu0590 PF00356 Bacterial regulatory proteins, lacI family Atu0590 PF13377 Periplasmic binding protein-like domain Atu0591 PF01547 Bacterial extracellular solute-binding protein Atu0592 PF00528 Binding-protein-dependent transport system inner membrane component Atu0593 PF00528 Binding-protein-dependent transport system inner membrane component Atu0594 PF00128 Alpha amylase, catalytic domain Atu0594 PF11941 Domain of unknown function (DUF3459) Atu0595 PF00005 ABC transporter Atu0595 PF08402 TOBE domain Atu0597 PF02872 5'-nucleotidase, C-terminal domain Atu0598 PF00920 Dehydratase family Atu0599 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Atu0600 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Atu0600 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Atu0601 PF01266 FAD dependent oxidoreductase Atu0602 PF00120 Glutamine synthetase, catalytic domain Atu0603 PF03486 HI0933-like protein Atu0605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0605 PF03466 LysR substrate binding domain Atu0607 PF00463 Isocitrate lyase family Atu0608 PF01381 Helix-turn-helix Atu0608 PF06114 Domain of unknown function (DUF955) Atu0608 PF09856 Atu0608 Atu0609 PF13416 Bacterial extracellular solute-binding protein Atu0610 PF00005 ABC transporter Atu0610 PF08402 TOBE domain Atu0611 PF00528 Binding-protein-dependent transport system inner membrane component Atu0612 PF00528 Binding-protein-dependent transport system inner membrane component Atu0613 PF00528 Binding-protein-dependent transport system inner membrane component Atu0614 PF00512 His Kinase A (phospho-acceptor) domain Atu0614 PF00989 PAS fold Atu0614 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0614 PF13188 PAS domain Atu0619 PF02541 Ppx/GppA phosphatase family Atu0620 PF01728 FtsJ-like methyltransferase Atu0621 PF07690 Major Facilitator Superfamily Atu0622 PF00753 Metallo-beta-lactamase superfamily Atu0624 PF00478 IMP dehydrogenase / GMP reductase domain Atu0624 PF00571 CBS domain Atu0626 PF00107 Zinc-binding dehydrogenase Atu0626 PF08240 Alcohol dehydrogenase GroES-like domain Atu0627 PF01738 Dienelactone hydrolase family Atu0628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0629 PF00072 Response regulator receiver domain Atu0629 PF00486 Transcriptional regulatory protein, C terminal Atu0631 PF00994 Probable molybdopterin binding domain Atu0632 PF00288 GHMP kinases N terminal domain Atu0632 PF08544 GHMP kinases C terminal Atu0633 PF00515 Tetratricopeptide repeat Atu0633 PF13181 Tetratricopeptide repeat Atu0633 PF13432 Tetratricopeptide repeat Atu0633 PF14559 Tetratricopeptide repeat Atu0634 PF00348 Polyprenyl synthetase Atu0635 PF09413 Domain of unknown function (DUF2007) Atu0636 PF05175 Methyltransferase small domain Atu0637 PF01343 Peptidase family S49 Atu0639 PF02091 Glycyl-tRNA synthetase alpha subunit Atu0641 PF04011 LemA family Atu0642 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Atu0643 PF09972 Atu0643 Atu0644 PF02092 Atu0644 Atu0644 PF05746 DALR anticodon binding domain Atu0645 PF04463 Atu0645 Atu0646 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0646 PF17200 Atu0646 Atu0647 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Atu0647 PF02843 Phosphoribosylglycinamide synthetase, C domain Atu0647 PF02844 Phosphoribosylglycinamide synthetase, N domain Atu0648 PF00575 S1 RNA binding domain Atu0648 PF09371 Tex-like protein N-terminal domain Atu0648 PF12836 Helix-hairpin-helix motif Atu0648 PF16921 Atu0648 Atu0649 PF02353 Mycolic acid cyclopropane synthetase Atu0650 PF06629 Atu0650 Atu0651 PF01040 UbiA prenyltransferase family Atu0653 PF06748 Protein of unknown function (DUF1217) Atu0654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0654 PF03466 LysR substrate binding domain Atu0656 PF04107 Glutamate-cysteine ligase family 2(GCS2) Atu0657 PF04452 RNA methyltransferase Atu0658 PF01384 Atu0658 Atu0660 PF05116 Sucrose-6F-phosphate phosphohydrolase Atu0661 PF00534 Glycosyl transferases group 1 Atu0661 PF13439 Glycosyltransferase Family 4 Atu0662 PF00392 Bacterial regulatory proteins, gntR family Atu0662 PF07729 FCD domain Atu0663 PF11902 Atu0663 Atu0664 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0664 PF03466 LysR substrate binding domain Atu0665 PF01565 FAD binding domain Atu0665 PF02913 FAD linked oxidases, C-terminal domain Atu0666 PF01565 FAD binding domain Atu0667 PF02754 Atu0667 Atu0667 PF12838 4Fe-4S dicluster domain Atu0668 PF13505 Outer membrane protein beta-barrel domain Atu0669 PF03734 L,D-transpeptidase catalytic domain Atu0670 PF03352 Methyladenine glycosylase Atu0671 PF03601 Atu0671 Atu0672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0672 PF03466 LysR substrate binding domain Atu0674 PF05016 Plasmid stabilisation system protein Atu0675 PF01402 Ribbon-helix-helix protein, copG family Atu0676 PF03129 Anticodon binding domain Atu0676 PF13393 Histidyl-tRNA synthetase Atu0677 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0678 PF13393 Histidyl-tRNA synthetase Atu0679 PF01634 ATP phosphoribosyltransferase Atu0680 PF07681 Atu0680 Atu0682 PF00118 TCP-1/cpn60 chaperonin family Atu0683 PF00166 Chaperonin 10 Kd subunit Atu0684 PF13242 HAD-hyrolase-like Atu0684 PF13344 Haloacid dehalogenase-like hydrolase Atu0685 PF01687 Riboflavin kinase Atu0685 PF06574 FAD synthetase Atu0686 PF00133 tRNA synthetases class I (I, L, M and V) Atu0686 PF08264 Anticodon-binding domain of tRNA Atu0688 PF14437 Atu0688 Atu0689 PF00849 RNA pseudouridylate synthase Atu0689 PF01479 S4 domain Atu0690 PF03602 Conserved hypothetical protein 95 Atu0691 PF01734 Patatin-like phospholipase Atu0692 PF00999 Sodium/hydrogen exchanger family Atu0692 PF02254 TrkA-N domain Atu0693 PF01523 Putative modulator of DNA gyrase Atu0694 PF00459 Inositol monophosphatase family Atu0695 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Atu0696 PF13419 Haloacid dehalogenase-like hydrolase Atu0697 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Atu0698 PF09866 Atu0698 Atu0699 PF01119 DNA mismatch repair protein, C-terminal domain Atu0699 PF08676 MutL C terminal dimerisation domain Atu0699 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0700 PF00072 Response regulator receiver domain Atu0700 PF08448 PAS fold Atu0701 PF00563 EAL domain Atu0701 PF00990 GGDEF domain Atu0702 PF08450 SMP-30/Gluconolaconase/LRE-like region Atu0703 PF01081 KDPG and KHG aldolase Atu0704 PF05035 2-keto-3-deoxy-galactonokinase Atu0705 PF13561 Enoyl-(Acyl carrier protein) reductase Atu0706 PF01614 Bacterial transcriptional regulator Atu0706 PF09339 IclR helix-turn-helix domain Atu0707 PF00196 Bacterial regulatory proteins, luxR family Atu0707 PF03472 Autoinducer binding domain Atu0708 PF13379 NMT1-like family Atu0709 PF01883 Domain of unknown function DUF59 Atu0709 PF10609 ParA/MinD ATPase like Atu0710 PF01544 CorA-like Mg2+ transporter protein Atu0711 PF02705 Atu0711 Atu0712 PF07486 Cell Wall Hydrolase Atu0713 PF09527 Atu0713 Atu0714 PF00119 ATP synthase A chain Atu0715 PF00137 ATP synthase subunit C Atu0716 PF00430 ATP synthase B/B' CF(0) Atu0717 PF00430 ATP synthase B/B' CF(0) Atu0718 PF01243 Pyridoxamine 5'-phosphate oxidase Atu0719 PF00132 Bacterial transferase hexapeptide (six repeats) Atu0720 PF01351 Ribonuclease HII Atu0721 PF04055 Radical SAM superfamily Atu0723 PF01565 FAD binding domain Atu0723 PF02913 FAD linked oxidases, C-terminal domain Atu0724 PF01300 Telomere recombination Atu0724 PF03481 Putative GTP-binding controlling metal-binding Atu0726 PF00355 Rieske [2Fe-2S] domain Atu0726 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Atu0727 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu0727 PF00175 Oxidoreductase NAD-binding domain Atu0727 PF00970 Oxidoreductase FAD-binding domain Atu0728 PF07886 Atu0728 Atu0730 PF07886 Atu0730 Atu0731 PF01544 CorA-like Mg2+ transporter protein Atu0732 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu0732 PF02770 Acyl-CoA dehydrogenase, middle domain Atu0732 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu0732 PF12806 Atu0732 Atu0733 PF00378 Enoyl-CoA hydratase/isomerase family Atu0735 PF05958 tRNA (Uracil-5-)-methyltransferase Atu0736 PF01479 S4 domain Atu0736 PF01728 FtsJ-like methyltransferase Atu0738 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0738 PF00672 HAMP domain Atu0738 PF05227 CHASE3 domain Atu0739 PF07670 Nucleoside recognition Atu0740 PF01037 AsnC family Atu0740 PF13404 AsnC-type helix-turn-helix domain Atu0741 PF13840 ACT domain Atu0742 PF12680 SnoaL-like domain Atu0743 PF13560 Helix-turn-helix domain Atu0744 PF12680 SnoaL-like domain Atu0745 PF02779 Transketolase, pyrimidine binding domain Atu0745 PF02780 Transketolase, C-terminal domain Atu0745 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Atu0746 PF02678 Pirin Atu0746 PF05726 Pirin C-terminal cupin domain Atu0747 PF02609 Exonuclease VII small subunit Atu0748 PF00850 Histone deacetylase domain Atu0749 PF02632 BioY family Atu0750 PF02361 Cobalt transport protein Atu0751 PF00005 ABC transporter Atu0752 PF06224 Atu0752 Atu0753 PF00925 GTP cyclohydrolase II Atu0753 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Atu0754 PF01264 Chorismate synthase Atu0755 PF07076 Atu0755 Atu0756 PF00300 Histidine phosphatase superfamily (branch 1) Atu0757 PF13561 Enoyl-(Acyl carrier protein) reductase Atu0758 PF00226 DnaJ domain Atu0758 PF01556 DnaJ C terminal domain Atu0759 PF16998 Atu0759 Atu0760 PF01243 Pyridoxamine 5'-phosphate oxidase Atu0760 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Atu0761 PF01925 Atu0761 Atu0762 PF03819 MazG nucleotide pyrophosphohydrolase domain Atu0763 PF13419 Haloacid dehalogenase-like hydrolase Atu0764 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0765 PF01523 Putative modulator of DNA gyrase Atu0766 PF06776 Invasion associated locus B (IalB) protein Atu0767 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Atu0767 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Atu0768 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atu0769 PF01040 UbiA prenyltransferase family Atu0770 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Atu0771 PF00510 Cytochrome c oxidase subunit III Atu0772 PF06170 Atu0772 Atu0773 PF02104 Atu0773 Atu0774 PF02401 LytB protein Atu0775 PF01636 Phosphotransferase enzyme family Atu0776 PF00075 RNase H Atu0777 PF07876 Stress responsive A/B Barrel Domain Atu0778 PF03797 Autotransporter beta-domain Atu0779 PF08534 Redoxin Atu0780 PF11412 Disulphide bond corrector protein DsbC Atu0781 PF02622 Uncharacterized ACR, COG1678 Atu0782 PF05532 CsbD-like Atu0783 PF10005 Atu0783 Atu0783 PF15887 Atu0783 Atu0784 PF00563 EAL domain Atu0784 PF00990 GGDEF domain Atu0784 PF07696 7TMR-DISM extracellular 2 Atu0784 PF08447 PAS fold Atu0785 PF13302 Acetyltransferase (GNAT) domain Atu0786 PF00675 Insulinase (Peptidase family M16) Atu0786 PF05193 Peptidase M16 inactive domain Atu0787 PF00291 Pyridoxal-phosphate dependent enzyme Atu0787 PF14821 Threonine synthase N terminus Atu0790 PF13419 Haloacid dehalogenase-like hydrolase Atu0791 PF00392 Bacterial regulatory proteins, gntR family Atu0791 PF07729 FCD domain Atu0792 PF06935 Atu0792 Atu0794 PF01555 DNA methylase Atu0796 PF00326 Prolyl oligopeptidase family Atu0797 PF13419 Haloacid dehalogenase-like hydrolase Atu0798 PF00730 HhH-GPD superfamily base excision DNA repair protein Atu0798 PF14815 NUDIX domain Atu0800 PF13462 Thioredoxin Atu0801 PF02463 RecF/RecN/SMC N terminal domain Atu0802 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0803 PF00391 PEP-utilising enzyme, mobile domain Atu0803 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Atu0803 PF02896 PEP-utilising enzyme, TIM barrel domain Atu0804 PF00375 Sodium:dicarboxylate symporter family Atu0806 PF07386 Atu0806 Atu0807 PF00753 Metallo-beta-lactamase superfamily Atu0809 PF05016 Plasmid stabilisation system protein Atu0810 PF03693 Uncharacterised protein family (UPF0156) Atu0811 PF06039 Atu0811 Atu0816 PF00009 Elongation factor Tu GTP binding domain Atu0817 PF01507 Phosphoadenosine phosphosulfate reductase family Atu0818 PF01507 Phosphoadenosine phosphosulfate reductase family Atu0819 PF02082 Transcriptional regulator Atu0820 PF13531 Bacterial extracellular solute-binding protein Atu0821 PF00528 Binding-protein-dependent transport system inner membrane component Atu0822 PF00528 Binding-protein-dependent transport system inner membrane component Atu0823 PF00005 ABC transporter Atu0823 PF12857 Atu0823 Atu0825 PF00107 Zinc-binding dehydrogenase Atu0825 PF08240 Alcohol dehydrogenase GroES-like domain Atu0826 PF00563 EAL domain Atu0826 PF00571 CBS domain Atu0826 PF00990 GGDEF domain Atu0828 PF00440 Bacterial regulatory proteins, tetR family Atu0828 PF13977 Bacterial transcriptional repressor Atu0829 PF00171 Aldehyde dehydrogenase family Atu0830 PF00732 GMC oxidoreductase Atu0830 PF05199 GMC oxidoreductase Atu0832 PF00654 Voltage gated chloride channel Atu0834 PF06089 Atu0834 Atu0835 PF02798 Glutathione S-transferase, N-terminal domain Atu0835 PF14497 Glutathione S-transferase, C-terminal domain Atu0836 PF00043 Glutathione S-transferase, C-terminal domain Atu0836 PF02798 Glutathione S-transferase, N-terminal domain Atu0837 PF12802 MarR family Atu0838 PF07690 Major Facilitator Superfamily Atu0840 PF01068 ATP dependent DNA ligase domain Atu0840 PF04675 DNA ligase N terminus Atu0840 PF04679 ATP dependent DNA ligase C terminal region Atu0841 PF00326 Prolyl oligopeptidase family Atu0842 PF04488 Glycosyltransferase sugar-binding region containing DXD motif Atu0843 PF00122 E1-E2 ATPase Atu0843 PF00403 Heavy-metal-associated domain Atu0843 PF00702 haloacid dehalogenase-like hydrolase Atu0844 PF03734 L,D-transpeptidase catalytic domain Atu0845 PF03734 L,D-transpeptidase catalytic domain Atu0846 PF01047 MarR family Atu0847 PF02566 OsmC-like protein Atu0848 PF09722 Atu0848 Atu0849 PF08808 Atu0849 Atu0850 PF00005 ABC transporter Atu0851 PF03795 YCII-related domain Atu0852 PF01047 MarR family Atu0853 PF05988 Atu0853 Atu0854 PF07617 Atu0854 Atu0855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0856 PF03466 LysR substrate binding domain Atu0857 PF00106 short chain dehydrogenase Atu0858 PF02627 Carboxymuconolactone decarboxylase family Atu0859 PF11512 Agrobacterium tumefaciens protein Atu4866 Atu0860 PF05872 Atu0860 Atu0863 PF01638 HxlR-like helix-turn-helix Atu0864 PF00106 short chain dehydrogenase Atu0865 PF02311 AraC-like ligand binding domain Atu0865 PF12833 Helix-turn-helix domain Atu0866 PF01810 Atu0866 Atu0867 PF00248 Aldo/keto reductase family Atu0868 PF08279 HTH domain Atu0868 PF13280 Atu0868 Atu0869 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0870 PF13489 Methyltransferase domain Atu0871 PF01063 Aminotransferase class IV Atu0872 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0872 PF00672 HAMP domain Atu0873 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0873 PF03466 LysR substrate binding domain Atu0874 PF13420 Acetyltransferase (GNAT) domain Atu0876 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Atu0876 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Atu0877 PF00149 Calcineurin-like phosphoesterase Atu0878 PF08279 HTH domain Atu0878 PF13280 Atu0878 Atu0879 PF01810 Atu0879 Atu0881 PF01322 Cytochrome C' Atu0882 PF00034 Cytochrome c Atu0883 PF09489 Atu0883 Atu0884 PF09490 Atu0884 Atu0886 PF01965 DJ-1/PfpI family Atu0887 PF00583 Acetyltransferase (GNAT) family Atu0888 PF13411 MerR HTH family regulatory protein Atu0890 PF02583 Metal-sensitive transcriptional repressor Atu0891 PF01545 Cation efflux family Atu0893 PF00005 ABC transporter Atu0894 PF00528 Binding-protein-dependent transport system inner membrane component Atu0895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu0897 PF00326 Prolyl oligopeptidase family Atu0897 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Atu0898 PF06059 Atu0898 Atu0899 PF00701 Dihydrodipicolinate synthetase family Atu0900 PF01522 Polysaccharide deacetylase Atu0901 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Atu0901 PF02805 Metal binding domain of Ada Atu0901 PF12833 Helix-turn-helix domain Atu0902 PF01594 Atu0902 Atu0903 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0904 PF00582 Universal stress protein family Atu0905 PF01258 Prokaryotic dksA/traR C4-type zinc finger Atu0906 PF03006 Atu0906 Atu0907 PF13420 Acetyltransferase (GNAT) domain Atu0908 PF01641 SelR domain Atu0909 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu0909 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atu0909 PF13244 Atu0909 Atu0910 PF04039 Atu0910 Atu0911 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atu0912 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu0913 PF01899 Atu0913 Atu0914 PF04066 Atu0914 Atu0915 PF03334 Atu0915 Atu0916 PF05443 ROS/MUCR transcriptional regulator protein Atu0917 PF08299 Bacterial dnaA protein helix-turn-helix Atu0919 PF02657 Fe-S metabolism associated domain Atu0920 PF17264 Atu0920 Atu0921 PF00512 His Kinase A (phospho-acceptor) domain Atu0921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0922 PF07372 Protein of unknown function (DUF1491) Atu0923 PF10098 Atu0923 Atu0926 PF06742 Protein of unknown function (DUF1214) Atu0927 PF01810 Atu0927 Atu0928 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0928 PF03466 LysR substrate binding domain Atu0929 PF00144 Beta-lactamase Atu0930 PF13372 Alginate export Atu0931 PF00905 Penicillin binding protein transpeptidase domain Atu0931 PF00912 Transglycosylase Atu0932 PF03692 Atu0932 Atu0933 PF00905 Penicillin binding protein transpeptidase domain Atu0934 PF15738 Atu0934 Atu0935 PF04221 RelB antitoxin Atu0936 PF13649 Methyltransferase domain Atu0937 PF00122 E1-E2 ATPase Atu0937 PF00403 Heavy-metal-associated domain Atu0937 PF00702 haloacid dehalogenase-like hydrolase Atu0938 PF00376 MerR family regulatory protein Atu0938 PF09278 MerR, DNA binding Atu0939 PF04014 Antidote-toxin recognition MazE Atu0940 PF02452 PemK-like protein Atu0942 PF07690 Major Facilitator Superfamily Atu0944 PF00251 Glycosyl hydrolases family 32 N-terminal domain Atu0945 PF02696 Atu0945 Atu0946 PF03435 Saccharopine dehydrogenase Atu0946 PF16653 Atu0946 Atu0947 PF01037 AsnC family Atu0947 PF13404 AsnC-type helix-turn-helix domain Atu0948 PF01638 HxlR-like helix-turn-helix Atu0949 PF05368 NmrA-like family Atu0950 PF10081 Atu0950 Atu0950 PF15420 Atu0950 Atu0951 PF03237 Terminase-like family Atu0951 PF17289 Atu0951 Atu0953 PF07876 Stress responsive A/B Barrel Domain Atu0954 PF04860 Phage portal protein Atu0956 PF04586 Atu0956 Atu0957 PF05065 Phage capsid family Atu0959 PF11367 Protein of unknown function (DUF3168) Atu0960 PF07690 Major Facilitator Superfamily Atu0962 PF10387 Protein of unknown function (DUF2442) Atu0964 PF09343 Atu0964 Atu0965 PF09356 Atu0965 Atu0965 PF09931 Atu0965 Atu0966 PF00877 NlpC/P60 family Atu0967 PF13547 Atu0967 Atu0967 PF13550 Atu0967 Atu0970 PF00072 Response regulator receiver domain Atu0970 PF00486 Transcriptional regulatory protein, C terminal Atu0971 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0974 PF03100 CcmE Atu0975 PF01578 Atu0975 Atu0975 PF16327 Atu0975 Atu0976 PF03918 Cytochrome C biogenesis protein Atu0977 PF13180 PDZ domain Atu0977 PF13365 Trypsin-like peptidase domain Atu0978 PF00072 Response regulator receiver domain Atu0978 PF00486 Transcriptional regulatory protein, C terminal Atu0979 PF00512 His Kinase A (phospho-acceptor) domain Atu0979 PF00672 HAMP domain Atu0979 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0981 PF03710 Glutamate-ammonia ligase adenylyltransferase Atu0981 PF08335 GlnD PII-uridylyltransferase Atu0982 PF00512 His Kinase A (phospho-acceptor) domain Atu0982 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0982 PF08447 PAS fold Atu0982 PF12860 Atu0982 Atu0983 PF02627 Carboxymuconolactone decarboxylase family Atu0984 PF01433 Peptidase family M1 Atu0984 PF11940 Domain of unknown function (DUF3458) Atu0984 PF17432 Atu0984 Atu0985 PF00892 EamA-like transporter family Atu0987 PF03167 Uracil DNA glycosylase superfamily Atu0988 PF00012 Hsp70 protein Atu0989 PF00990 GGDEF domain Atu0989 PF13188 PAS domain Atu0990 PF13561 Enoyl-(Acyl carrier protein) reductase Atu0991 PF01545 Cation efflux family Atu0992 PF00892 EamA-like transporter family Atu0993 PF00440 Bacterial regulatory proteins, tetR family Atu0993 PF16925 Atu0993 Atu0994 PF01946 Thi4 family Atu0994 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase Atu0995 PF00805 Pentapeptide repeats (8 copies) Atu0995 PF13599 Pentapeptide repeats (9 copies) Atu0996 PF08240 Alcohol dehydrogenase GroES-like domain Atu0996 PF13602 Zinc-binding dehydrogenase Atu0997 PF01638 HxlR-like helix-turn-helix Atu0998 PF02673 Atu0998 Atu0999 PF00571 CBS domain Atu0999 PF01769 Divalent cation transporter Atu0999 PF03448 MgtE intracellular N domain Atu1000 PF07690 Major Facilitator Superfamily Atu1001 PF00781 Diacylglycerol kinase catalytic domain Atu1002 PF00202 Aminotransferase class-III Atu1003 PF02566 OsmC-like protein Atu1004 PF01850 PIN domain Atu1005 PF09957 Atu1005 Atu1006 PF01048 Phosphorylase superfamily Atu1006 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus Atu1009 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) Atu1011 PF00155 Aminotransferase class I and II Atu1013 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1013 PF14759 Reductase C-terminal Atu1014 PF03328 HpcH/HpaI aldolase/citrate lyase family Atu1020 PF02530 Atu1020 Atu1021 PF02530 Atu1021 Atu1022 PF01464 Transglycosylase SLT domain Atu1024 PF00701 Dihydrodipicolinate synthetase family Atu1025 PF01668 SmpB protein Atu1027 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu1027 PF11563 Protoglobin Atu1028 PF01936 NYN domain Atu1029 PF01192 RNA polymerase Rpb6 Atu1030 PF02824 TGS domain Atu1030 PF04607 Region found in RelA / SpoT proteins Atu1030 PF13291 ACT domain Atu1030 PF13328 HD domain Atu1032 PF09835 Atu1032 Atu1033 PF01648 4'-phosphopantetheinyl transferase superfamily Atu1034 PF00717 Peptidase S24-like Atu1034 PF10502 Signal peptidase, peptidase S26 Atu1035 PF00035 Double-stranded RNA binding motif Atu1035 PF14622 Ribonuclease-III-like Atu1036 PF01926 50S ribosome-binding GTPase Atu1036 PF07650 KH domain Atu1037 PF00027 Cyclic nucleotide-binding domain Atu1037 PF13545 Crp-like helix-turn-helix domain Atu1038 PF00072 Response regulator receiver domain Atu1039 PF02565 Recombination protein O C terminal Atu1039 PF11967 Recombination protein O N terminal Atu1040 PF07690 Major Facilitator Superfamily Atu1041 PF08241 Methyltransferase domain Atu1042 PF03473 MOSC domain Atu1042 PF03476 MOSC N-terminal beta barrel domain Atu1043 PF01966 HD domain Atu1044 PF10101 Atu1044 Atu1045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu1046 PF09084 NMT1/THI5 like Atu1047 PF00005 ABC transporter Atu1048 PF00528 Binding-protein-dependent transport system inner membrane component Atu1049 PF09223 YodA lipocalin-like domain Atu1050 PF00924 Mechanosensitive ion channel Atu1053 PF01571 Aminomethyltransferase folate-binding domain Atu1053 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu1056 PF09539 Atu1056 Atu1057 PF00293 NUDIX domain Atu1058 PF02694 Atu1058 Atu1059 PF02586 Uncharacterised ACR, COG2135 Atu1060 PF00072 Response regulator receiver domain Atu1060 PF00990 GGDEF domain Atu1062 PF01066 CDP-alcohol phosphatidyltransferase Atu1062 PF08009 Atu1062 Atu1063 PF02666 Atu1063 Atu1064 PF00005 ABC transporter Atu1064 PF00664 ABC transporter transmembrane region Atu1066 PF03641 Possible lysine decarboxylase Atu1067 PF00905 Penicillin binding protein transpeptidase domain Atu1067 PF03717 Penicillin-binding Protein dimerisation domain Atu1068 PF00892 EamA-like transporter family Atu1069 PF00561 alpha/beta hydrolase fold Atu1070 PF04828 Glutathione-dependent formaldehyde-activating enzyme Atu1071 PF04828 Glutathione-dependent formaldehyde-activating enzyme Atu1072 PF04480 Protein of unknown function (DUF559) Atu1073 PF01406 tRNA synthetases class I (C) catalytic domain Atu1073 PF09190 DALR domain Atu1074 PF00106 short chain dehydrogenase Atu1075 PF00156 Phosphoribosyl transferase domain Atu1075 PF13537 Glutamine amidotransferase domain Atu1076 PF02674 Atu1076 Atu1077 PF13481 AAA domain Atu1077 PF13541 Subunit ChlI of Mg-chelatase Atu1079 PF03693 Uncharacterised protein family (UPF0156) Atu1080 PF00842 Alanine racemase, C-terminal domain Atu1080 PF01168 Alanine racemase, N-terminal domain Atu1081 PF02311 AraC-like ligand binding domain Atu1081 PF12833 Helix-turn-helix domain Atu1082 PF03591 Atu1082 Atu1083 PF05437 Atu1083 Atu1084 PF00772 DnaB-like helicase N terminal domain Atu1084 PF03796 DnaB-like helicase C terminal domain Atu1085 PF12802 MarR family Atu1086 PF07690 Major Facilitator Superfamily Atu1087 PF00529 HlyD family secretion protein Atu1087 PF16576 Atu1087 Atu1088 PF01281 Ribosomal protein L9, N-terminal domain Atu1088 PF03948 Ribosomal protein L9, C-terminal domain Atu1089 PF09991 Atu1089 Atu1090 PF01084 Ribosomal protein S18 Atu1091 PF01250 Ribosomal protein S6 Atu1093 PF00248 Aldo/keto reductase family Atu1094 PF00698 Acyl transferase domain Atu1095 PF13561 Enoyl-(Acyl carrier protein) reductase Atu1096 PF00550 Phosphopantetheine attachment site Atu1097 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu1097 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu1099 PF02618 YceG-like family Atu1100 PF03755 Atu1100 Atu1100 PF08340 Atu1100 Atu1101 PF00625 Guanylate kinase Atu1102 PF01738 Dienelactone hydrolase family Atu1103 PF00398 Ribosomal RNA adenine dimethylase Atu1104 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Atu1105 PF13624 SurA N-terminal domain Atu1106 PF04453 Organic solvent tolerance protein Atu1107 PF03739 Atu1107 Atu1108 PF03739 Atu1108 Atu1110 PF00883 Cytosol aminopeptidase family, catalytic domain Atu1110 PF02789 Cytosol aminopeptidase family, N-terminal domain Atu1111 PF04364 DNA polymerase III chi subunit, HolC Atu1112 PF00990 GGDEF domain Atu1112 PF01590 GAF domain Atu1113 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu1114 PF00563 EAL domain Atu1114 PF00990 GGDEF domain Atu1115 PF00512 His Kinase A (phospho-acceptor) domain Atu1115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1116 PF00072 Response regulator receiver domain Atu1116 PF00196 Bacterial regulatory proteins, luxR family Atu1117 PF03928 Domain of unknown function (DUF336) Atu1118 PF00005 ABC transporter Atu1118 PF12848 ABC transporter Atu1119 PF00990 GGDEF domain Atu1121 PF13410 Glutathione S-transferase, C-terminal domain Atu1121 PF13417 Glutathione S-transferase, N-terminal domain Atu1122 PF00334 Nucleoside diphosphate kinase Atu1124 PF11706 CGNR zinc finger Atu1125 PF02653 Atu1125 Atu1126 PF02391 MoaE protein Atu1127 PF02597 ThiS family Atu1128 PF01066 CDP-alcohol phosphatidyltransferase Atu1129 PF01541 GIY-YIG catalytic domain Atu1129 PF02151 UvrB/uvrC motif Atu1129 PF08459 UvrC Helix-hairpin-helix N-terminal Atu1130 PF00106 short chain dehydrogenase Atu1131 PF13505 Outer membrane protein beta-barrel domain Atu1132 PF13417 Glutathione S-transferase, N-terminal domain Atu1133 PF00445 Ribonuclease T2 family Atu1134 PF03706 Atu1134 Atu1135 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ Atu1136 PF00384 Molybdopterin oxidoreductase Atu1136 PF01568 Molydopterin dinucleotide binding domain Atu1136 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atu1137 PF00293 NUDIX domain Atu1138 PF01278 Omptin family Atu1139 PF01278 Omptin family Atu1140 PF00551 Formyl transferase Atu1141 PF00586 AIR synthase related protein, N-terminal domain Atu1141 PF02769 AIR synthase related protein, C-terminal domain Atu1142 PF01594 Atu1142 Atu1144 PF02503 Polyphosphate kinase middle domain Atu1144 PF13089 Polyphosphate kinase N-terminal domain Atu1144 PF13090 Polyphosphate kinase C-terminal domain Atu1145 PF02541 Ppx/GppA phosphatase family Atu1146 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1148 PF13449 Esterase-like activity of phytase Atu1149 PF00211 Adenylate and Guanylate cyclase catalytic domain Atu1151 PF00570 HRDC domain Atu1151 PF01612 3'-5' exonuclease Atu1152 PF07690 Major Facilitator Superfamily Atu1153 PF00152 tRNA synthetases class II (D, K and N) Atu1153 PF01336 OB-fold nucleic acid binding domain Atu1153 PF02938 GAD domain Atu1154 PF13515 Atu1154 Atu1155 PF06123 Atu1155 Atu1156 PF00916 Atu1156 Atu1156 PF01740 STAS domain Atu1158 PF00521 DNA gyrase/topoisomerase IV, subunit A Atu1158 PF03989 DNA gyrase C-terminal domain, beta-propeller Atu1159 PF04376 Atu1159 Atu1159 PF04377 Atu1159 Atu1160 PF06271 Atu1160 Atu1161 PF00490 Delta-aminolevulinic acid dehydratase Atu1163 PF13463 Winged helix DNA-binding domain Atu1164 PF01471 Putative peptidoglycan binding domain Atu1164 PF03734 L,D-transpeptidase catalytic domain Atu1165 PF00464 Serine hydroxymethyltransferase Atu1166 PF03477 ATP cone domain Atu1169 PF00677 Lumazine binding domain Atu1170 PF01810 Atu1170 Atu1171 PF00885 6,7-dimethyl-8-ribityllumazine synthase Atu1172 PF01029 NusB family Atu1173 PF07690 Major Facilitator Superfamily Atu1174 PF03030 Inorganic H+ pyrophosphatase Atu1175 PF04355 SmpA / OmlA family Atu1176 PF03981 Atu1176 Atu1177 PF02620 Atu1177 Atu1178 PF02504 Fatty acid synthesis protein Atu1179 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Atu1179 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Atu1180 PF00216 Bacterial DNA-binding protein Atu1181 PF13411 MerR HTH family regulatory protein Atu1183 PF00940 DNA-dependent RNA polymerase Atu1183 PF14700 DNA-directed RNA polymerase N-terminal Atu1187 PF03906 Atu1187 Atu1190 PF07275 Antirestriction protein (ArdA) Atu1192 PF12802 MarR family Atu1194 PF00589 Phage integrase family Atu1195 PF00122 E1-E2 ATPase Atu1195 PF00403 Heavy-metal-associated domain Atu1195 PF00702 haloacid dehalogenase-like hydrolase Atu1196 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu1196 PF00175 Oxidoreductase NAD-binding domain Atu1196 PF00970 Oxidoreductase FAD-binding domain Atu1197 PF00376 MerR family regulatory protein Atu1197 PF09278 MerR, DNA binding Atu1198 PF00528 Binding-protein-dependent transport system inner membrane component Atu1199 PF00528 Binding-protein-dependent transport system inner membrane component Atu1199 PF12911 Atu1199 Atu1200 PF00005 ABC transporter Atu1200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu1201 PF00005 ABC transporter Atu1201 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu1202 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu1203 PF00403 Heavy-metal-associated domain Atu1204 PF02386 Cation transport protein Atu1205 PF00291 Pyridoxal-phosphate dependent enzyme Atu1205 PF00585 C-terminal regulatory domain of Threonine dehydratase Atu1206 PF10115 Atu1206 Atu1207 PF00990 GGDEF domain Atu1208 PF02525 Flavodoxin-like fold Atu1209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu1209 PF03466 LysR substrate binding domain Atu1210 PF00149 Calcineurin-like phosphoesterase Atu1210 PF02872 5'-nucleotidase, C-terminal domain Atu1212 PF06718 Atu1212 Atu1213 PF14247 Atu1213 Atu1214 PF01872 RibD C-terminal domain Atu1215 PF00581 Rhodanese-like domain Atu1216 PF01411 tRNA synthetases class II (A) Atu1216 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atu1217 PF00291 Pyridoxal-phosphate dependent enzyme Atu1218 PF00875 DNA photolyase Atu1218 PF03441 FAD binding domain of DNA photolyase Atu1219 PF06169 Protein of unknown function (DUF982) Atu1220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Atu1222 PF11154 Atu1222 Atu1226 PF06055 Atu1226 Atu1232 PF06897 Atu1232 Atu1236 PF02397 Atu1236 Atu1236 PF13727 CoA-binding domain Atu1237 PF00534 Glycosyl transferases group 1 Atu1237 PF13579 Glycosyl transferase 4-like domain Atu1238 PF02563 Polysaccharide biosynthesis/export protein Atu1238 PF10531 SLBB domain Atu1239 PF02706 Chain length determinant protein Atu1240 PF13480 Acetyltransferase (GNAT) domain Atu1241 PF11003 Atu1241 Atu1242 PF02628 Atu1242 Atu1243 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase Atu1244 PF01118 Semialdehyde dehydrogenase, NAD binding domain Atu1245 PF00491 Arginase family Atu1246 PF00380 Ribosomal protein S9/S16 Atu1247 PF00572 Ribosomal protein L13 Atu1248 PF00892 EamA-like transporter family Atu1250 PF13380 CoA binding domain Atu1251 PF01053 Cys/Met metabolism PLP-dependent enzyme Atu1253 PF05899 Protein of unknown function (DUF861) Atu1254 PF12840 Helix-turn-helix domain Atu1255 PF13561 Enoyl-(Acyl carrier protein) reductase Atu1256 PF00067 Cytochrome P450 Atu1257 PF00990 GGDEF domain Atu1258 PF00574 Clp protease Atu1259 PF06689 ClpX C4-type zinc finger Atu1259 PF07724 AAA domain (Cdc48 subfamily) Atu1259 PF10431 C-terminal, D2-small domain, of ClpB protein Atu1261 PF00004 ATPase family associated with various cellular activities (AAA) Atu1261 PF02190 ATP-dependent protease La (LON) domain Atu1261 PF05362 Lon protease (S16) C-terminal proteolytic domain Atu1262 PF00216 Bacterial DNA-binding protein Atu1263 PF13449 Esterase-like activity of phytase Atu1268 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Atu1269 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Atu1270 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Atu1271 PF04828 Glutathione-dependent formaldehyde-activating enzyme Atu1272 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Atu1274 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Atu1275 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Atu1275 PF10531 SLBB domain Atu1275 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Atu1276 PF00384 Molybdopterin oxidoreductase Atu1276 PF09326 Atu1276 Atu1276 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Atu1276 PF13510 2Fe-2S iron-sulfur cluster binding domain Atu1277 PF00146 NADH dehydrogenase Atu1278 PF12838 4Fe-4S dicluster domain Atu1279 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Atu1280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atu1281 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu1281 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atu1281 PF06455 Atu1281 Atu1282 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu1282 PF01059 Atu1282 Atu1283 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu1284 PF02237 Biotin protein ligase C terminal domain Atu1284 PF03099 Biotin/lipoate A/B protein ligase family Atu1285 PF07521 RNA-metabolising metallo-beta-lactamase Atu1285 PF12706 Beta-lactamase superfamily domain Atu1286 PF07330 Atu1286 Atu1288 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atu1288 PF03129 Anticodon binding domain Atu1289 PF02687 Atu1289 Atu1289 PF12704 MacB-like periplasmic core domain Atu1290 PF00005 ABC transporter Atu1292 PF02811 PHP domain Atu1292 PF07733 Bacterial DNA polymerase III alpha subunit Atu1292 PF14579 Helix-hairpin-helix motif Atu1293 PF01471 Putative peptidoglycan binding domain Atu1293 PF03734 L,D-transpeptidase catalytic domain Atu1294 PF00817 impB/mucB/samB family Atu1294 PF11799 impB/mucB/samB family C-terminal domain Atu1296 PF00072 Response regulator receiver domain Atu1297 PF00072 Response regulator receiver domain Atu1297 PF00990 GGDEF domain Atu1299 PF00471 Ribosomal protein L33 Atu1300 PF07690 Major Facilitator Superfamily Atu1301 PF00293 NUDIX domain Atu1302 PF06170 Atu1302 Atu1303 PF00575 S1 RNA binding domain Atu1303 PF00773 RNB domain Atu1304 PF01131 DNA topoisomerase Atu1304 PF01396 Atu1304 Atu1304 PF01751 Toprim domain Atu1304 PF13368 Atu1304 Atu1305 PF02481 DNA recombination-mediator protein A Atu1306 PF02660 Atu1306 Atu1307 PF01979 Amidohydrolase family Atu1308 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Atu1308 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Atu1310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu1310 PF02770 Acyl-CoA dehydrogenase, middle domain Atu1311 PF00583 Acetyltransferase (GNAT) family Atu1312 PF03693 Uncharacterised protein family (UPF0156) Atu1314 PF00440 Bacterial regulatory proteins, tetR family Atu1316 PF03652 Uncharacterised protein family (UPF0081) Atu1317 PF13483 Beta-lactamase superfamily domain Atu1318 PF02686 Glu-tRNAGln amidotransferase C subunit Atu1319 PF01425 Amidase Atu1320 PF00583 Acetyltransferase (GNAT) family Atu1321 PF09857 Atu1321 Atu1322 PF00583 Acetyltransferase (GNAT) family Atu1323 PF06961 Atu1323 Atu1324 PF02637 GatB domain Atu1324 PF02934 GatB/GatE catalytic domain Atu1325 PF13673 Acetyltransferase (GNAT) domain Atu1326 PF00583 Acetyltransferase (GNAT) family Atu1327 PF05071 Atu1327 Atu1328 PF09923 Atu1328 Atu1329 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Atu1330 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Atu1330 PF02785 Biotin carboxylase C-terminal domain Atu1330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu1331 PF00364 Biotin-requiring enzyme Atu1332 PF01220 Dehydroquinase class II Atu1333 PF01323 DSBA-like thioredoxin domain Atu1334 PF00155 Aminotransferase class I and II Atu1335 PF12840 Helix-turn-helix domain Atu1336 PF07978 NIPSNAP Atu1337 PF03992 Antibiotic biosynthesis monooxygenase Atu1338 PF13561 Enoyl-(Acyl carrier protein) reductase Atu1339 PF10150 Ribonuclease E/G family Atu1340 PF01520 N-acetylmuramoyl-L-alanine amidase Atu1340 PF11741 AMIN domain Atu1341 PF00905 Penicillin binding protein transpeptidase domain Atu1341 PF00912 Transglycosylase Atu1341 PF17092 Atu1341 Atu1342 PF00472 RF-1 domain Atu1342 PF03462 PCRF domain Atu1343 PF00857 Isochorismatase family Atu1345 PF01513 ATP-NAD kinase Atu1346 PF02567 Phenazine biosynthesis-like protein Atu1347 PF00009 Elongation factor Tu GTP binding domain Atu1347 PF00679 Elongation factor G C-terminus Atu1347 PF03764 Elongation factor G, domain IV Atu1347 PF14492 Elongation Factor G, domain II Atu1348 PF01442 Apolipoprotein A1/A4/E domain Atu1349 PF01627 Hpt domain Atu1350 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu1351 PF06037 Atu1351 Atu1352 PF00809 Pterin binding enzyme Atu1353 PF02152 Dihydroneopterin aldolase Atu1354 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Atu1356 PF05128 Atu1356 Atu1357 PF04317 Atu1357 Atu1358 PF00300 Histidine phosphatase superfamily (branch 1) Atu1359 PF01258 Prokaryotic dksA/traR C4-type zinc finger Atu1360 PF04347 Atu1360 Atu1362 PF00072 Response regulator receiver domain Atu1362 PF00989 PAS fold Atu1362 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1362 PF08448 PAS fold Atu1363 PF02617 ATP-dependent Clp protease adaptor protein ClpS Atu1364 PF00004 ATPase family associated with various cellular activities (AAA) Atu1364 PF02861 Clp amino terminal domain Atu1364 PF07724 AAA domain (Cdc48 subfamily) Atu1364 PF10431 C-terminal, D2-small domain, of ClpB protein Atu1366 PF05437 Atu1366 Atu1367 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu1367 PF03466 LysR substrate binding domain Atu1368 PF09347 Domain of unknown function (DUF1989) Atu1369 PF01230 HIT domain Atu1370 PF04339 Atu1370 Atu1371 PF03009 Glycerophosphoryl diester phosphodiesterase family Atu1372 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease Atu1373 PF08904 Atu1373 Atu1374 PF00318 Ribosomal protein S2 Atu1375 PF00889 Elongation factor TS Atu1376 PF00696 Amino acid kinase family Atu1377 PF01765 Ribosome recycling factor Atu1378 PF01255 Putative undecaprenyl diphosphate synthase Atu1379 PF01148 Cytidylyltransferase family Atu1380 PF02163 Peptidase family M50 Atu1380 PF13180 PDZ domain Atu1381 PF01103 Surface antigen Atu1381 PF07244 Surface antigen variable number repeat Atu1382 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1382 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Atu1383 PF07977 FabA-like domain Atu1384 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1384 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Atu1385 PF06230 Protein of unknown function (DUF1009) Atu1386 PF02684 Atu1386 Atu1387 PF00392 Bacterial regulatory proteins, gntR family Atu1387 PF07729 FCD domain Atu1388 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1389 PF00528 Binding-protein-dependent transport system inner membrane component Atu1390 PF00528 Binding-protein-dependent transport system inner membrane component Atu1391 PF00005 ABC transporter Atu1392 PF00285 Citrate synthase Atu1393 PF03772 Atu1393 Atu1393 PF13567 Atu1393 Atu1394 PF13417 Glutathione S-transferase, N-terminal domain Atu1395 PF00717 Peptidase S24-like Atu1395 PF01726 LexA DNA binding domain Atu1396 PF00005 ABC transporter Atu1397 PF00528 Binding-protein-dependent transport system inner membrane component Atu1398 PF00528 Binding-protein-dependent transport system inner membrane component Atu1399 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu1401 PF00005 ABC transporter Atu1401 PF08402 TOBE domain Atu1402 PF00528 Binding-protein-dependent transport system inner membrane component Atu1403 PF00528 Binding-protein-dependent transport system inner membrane component Atu1404 PF01547 Bacterial extracellular solute-binding protein Atu1405 PF00392 Bacterial regulatory proteins, gntR family Atu1405 PF07729 FCD domain Atu1406 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu1406 PF13378 Enolase C-terminal domain-like Atu1407 PF13561 Enoyl-(Acyl carrier protein) reductase Atu1408 PF00107 Zinc-binding dehydrogenase Atu1408 PF08240 Alcohol dehydrogenase GroES-like domain Atu1409 PF04115 Ureidoglycolate hydrolase Atu1410 PF00005 ABC transporter Atu1411 PF00005 ABC transporter Atu1411 PF02653 Atu1411 Atu1411 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu1412 PF02653 Atu1412 Atu1413 PF13458 Periplasmic binding protein Atu1414 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu1414 PF02770 Acyl-CoA dehydrogenase, middle domain Atu1414 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu1415 PF00106 short chain dehydrogenase Atu1416 PF00501 AMP-binding enzyme Atu1417 PF00378 Enoyl-CoA hydratase/isomerase family Atu1419 PF00392 Bacterial regulatory proteins, gntR family Atu1419 PF07729 FCD domain Atu1420 PF01571 Aminomethyltransferase folate-binding domain Atu1420 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu1421 PF04909 Amidohydrolase Atu1422 PF01047 MarR family Atu1423 PF13468 Glyoxalase-like domain Atu1424 PF00793 DAHP synthetase I family Atu1426 PF00113 Enolase, C-terminal TIM barrel domain Atu1426 PF03952 Enolase, N-terminal domain Atu1428 PF04977 Septum formation initiator Atu1429 PF00676 Dehydrogenase E1 component Atu1430 PF00364 Biotin-requiring enzyme Atu1430 PF02779 Transketolase, pyrimidine binding domain Atu1430 PF02780 Transketolase, C-terminal domain Atu1432 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atu1432 PF02817 e3 binding domain Atu1433 PF13472 GDSL-like Lipase/Acylhydrolase family Atu1434 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu1434 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1435 PF04226 Atu1435 Atu1436 PF04055 Radical SAM superfamily Atu1436 PF16881 Atu1436 Atu1437 PF00892 EamA-like transporter family Atu1438 PF12833 Helix-turn-helix domain Atu1441 PF03364 Polyketide cyclase / dehydrase and lipid transport Atu1442 PF02464 Competence-damaged protein Atu1443 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Atu1443 PF02542 YgbB family Atu1444 PF01207 Dihydrouridine synthase (Dus) Atu1445 PF00512 His Kinase A (phospho-acceptor) domain Atu1445 PF00989 PAS fold Atu1445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1446 PF00072 Response regulator receiver domain Atu1446 PF00158 Sigma-54 interaction domain Atu1446 PF02954 Bacterial regulatory protein, Fis family Atu1447 PF00512 His Kinase A (phospho-acceptor) domain Atu1447 PF00672 HAMP domain Atu1447 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1447 PF08448 PAS fold Atu1448 PF00072 Response regulator receiver domain Atu1448 PF00158 Sigma-54 interaction domain Atu1448 PF02954 Bacterial regulatory protein, Fis family Atu1449 PF02080 TrkA-C domain Atu1449 PF02254 TrkA-N domain Atu1450 PF17209 Atu1450 Atu1451 PF01926 50S ribosome-binding GTPase Atu1451 PF13167 Atu1451 Atu1451 PF16360 Atu1451 Atu1452 PF03819 MazG nucleotide pyrophosphohydrolase domain Atu1453 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Atu1454 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu1454 PF10414 Sirohaem synthase dimerisation region Atu1454 PF13241 Putative NAD(P)-binding Atu1455 PF11011 Atu1455 Atu1456 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Atu1456 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Atu1457 PF06073 Atu1457 Atu1458 PF00970 Oxidoreductase FAD-binding domain Atu1459 PF12832 MFS_1 like family Atu1461 PF03372 Endonuclease/Exonuclease/phosphatase family Atu1462 PF02347 Glycine cleavage system P-protein Atu1463 PF01597 Glycine cleavage H-protein Atu1464 PF01571 Aminomethyltransferase folate-binding domain Atu1464 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu1468 PF04314 Protein of unknown function (DUF461) Atu1468 PF07987 Domain of unkown function (DUF1775) Atu1470 PF02537 Atu1470 Atu1471 PF00849 RNA pseudouridylate synthase Atu1472 PF13419 Haloacid dehalogenase-like hydrolase Atu1473 PF07542 ATP12 chaperone protein Atu1475 PF01042 Endoribonuclease L-PSP Atu1476 PF00756 Putative esterase Atu1477 PF07077 Atu1477 Atu1478 PF02639 Atu1478 Atu1480 PF00578 AhpC/TSA family Atu1480 PF10417 C-terminal domain of 1-Cys peroxiredoxin Atu1482 PF06353 Atu1482 Atu1483 PF01292 Prokaryotic cytochrome b561 Atu1485 PF04542 Sigma-70 region 2 Atu1485 PF08281 Sigma-70, region 4 Atu1486 PF03640 Atu1486 Atu1487 PF04264 YceI-like domain Atu1488 PF00665 Integrase core domain Atu1488 PF13936 Helix-turn-helix domain Atu1489 PF03358 NADPH-dependent FMN reductase Atu1490 PF03960 ArsC family Atu1491 PF01758 Sodium Bile acid symporter family Atu1492 PF12840 Helix-turn-helix domain Atu1493 PF00654 Voltage gated chloride channel Atu1494 PF12706 Beta-lactamase superfamily domain Atu1495 PF01026 TatD related DNase Atu1496 PF08264 Anticodon-binding domain of tRNA Atu1496 PF09334 tRNA synthetases class I (M) Atu1497 PF13177 DNA polymerase III, delta subunit Atu1498 PF02223 Thymidylate kinase Atu1499 PF00768 D-alanyl-D-alanine carboxypeptidase Atu1499 PF07943 Penicillin-binding protein 5, C-terminal domain Atu1500 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Atu1505 PF00768 D-alanyl-D-alanine carboxypeptidase Atu1505 PF05036 Sporulation related domain Atu1507 PF00521 DNA gyrase/topoisomerase IV, subunit A Atu1507 PF03989 DNA gyrase C-terminal domain, beta-propeller Atu1508 PF01914 Atu1508 Atu1509 PF00571 CBS domain Atu1509 PF04982 Atu1509 Atu1510 PF05016 Plasmid stabilisation system protein Atu1511 PF03693 Uncharacterised protein family (UPF0156) Atu1512 PF00436 Single-strand binding protein family Atu1513 PF00005 ABC transporter Atu1513 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu1514 PF01904 Protein of unknown function DUF72 Atu1515 PF01207 Dihydrouridine synthase (Dus) Atu1516 PF01557 Fumarylacetoacetate (FAA) hydrolase family Atu1517 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1518 PF01475 Ferric uptake regulator family Atu1519 PF00950 Atu1519 Atu1520 PF00005 ABC transporter Atu1521 PF01297 Periplasmic solute binding protein family Atu1522 PF00356 Bacterial regulatory proteins, lacI family Atu1522 PF13377 Periplasmic binding protein-like domain Atu1523 PF00703 Glycosyl hydrolases family 2 Atu1524 PF00248 Aldo/keto reductase family Atu1525 PF11776 Domain of unknown function (DUF3315) Atu1526 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Atu1526 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atu1527 PF03597 Atu1527 Atu1528 PF00122 E1-E2 ATPase Atu1528 PF00403 Heavy-metal-associated domain Atu1528 PF00702 haloacid dehalogenase-like hydrolase Atu1529 PF05751 Atu1529 Atu1530 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Atu1530 PF12801 Atu1530 Atu1530 PF13746 4Fe-4S dicluster domain Atu1532 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu1533 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu1534 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Atu1534 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Atu1535 PF05545 Atu1535 Atu1536 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO Atu1537 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atu1539 PF00916 Atu1539 Atu1539 PF01740 STAS domain Atu1540 PF08857 Putative ParB-like nuclease Atu1541 PF00924 Mechanosensitive ion channel Atu1542 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Atu1544 PF04654 Atu1544 Atu1545 PF07786 Atu1545 Atu1546 PF13411 MerR HTH family regulatory protein Atu1547 PF00571 CBS domain Atu1547 PF01769 Divalent cation transporter Atu1547 PF03448 MgtE intracellular N domain Atu1548 PF00384 Molybdopterin oxidoreductase Atu1548 PF01568 Molydopterin dinucleotide binding domain Atu1550 PF01327 Polypeptide deformylase Atu1551 PF02566 OsmC-like protein Atu1553 PF08447 PAS fold Atu1556 PF03099 Biotin/lipoate A/B protein ligase family Atu1557 PF00107 Zinc-binding dehydrogenase Atu1557 PF08240 Alcohol dehydrogenase GroES-like domain Atu1558 PF00892 EamA-like transporter family Atu1560 PF00494 Squalene/phytoene synthase Atu1561 PF04430 Protein of unknown function (DUF498/DUF598) Atu1562 PF02355 Protein export membrane protein Atu1562 PF07549 SecD/SecF GG Motif Atu1563 PF02699 Preprotein translocase subunit Atu1564 PF05673 Protein of unknown function (DUF815) Atu1565 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1567 PF00107 Zinc-binding dehydrogenase Atu1567 PF08240 Alcohol dehydrogenase GroES-like domain Atu1568 PF00440 Bacterial regulatory proteins, tetR family Atu1568 PF13972 Bacterial transcriptional repressor Atu1569 PF00067 Cytochrome P450 Atu1570 PF11324 Atu1570 Atu1571 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1571 PF06426 Serine acetyltransferase, N-terminal Atu1572 PF00561 alpha/beta hydrolase fold Atu1573 PF10276 Zinc-finger domain Atu1574 PF01494 FAD binding domain Atu1575 PF01053 Cys/Met metabolism PLP-dependent enzyme Atu1577 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1578 PF00528 Binding-protein-dependent transport system inner membrane component Atu1579 PF00528 Binding-protein-dependent transport system inner membrane component Atu1580 PF00005 ABC transporter Atu1586 PF01368 DHH family Atu1586 PF02272 DHHA1 domain Atu1588 PF00742 Homoserine dehydrogenase Atu1588 PF01842 ACT domain Atu1588 PF03447 Homoserine dehydrogenase, NAD binding domain Atu1589 PF00155 Aminotransferase class I and II Atu1590 PF01156 Inosine-uridine preferring nucleoside hydrolase Atu1591 PF01925 Atu1591 Atu1594 PF03279 Atu1594 Atu1595 PF00107 Zinc-binding dehydrogenase Atu1595 PF08240 Alcohol dehydrogenase GroES-like domain Atu1596 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu1596 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu1597 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu1599 PF07977 FabA-like domain Atu1600 PF00550 Phosphopantetheine attachment site Atu1601 PF04055 Radical SAM superfamily Atu1602 PF00027 Cyclic nucleotide-binding domain Atu1602 PF13545 Crp-like helix-turn-helix domain Atu1604 PF07167 Atu1604 Atu1605 PF03749 Sugar fermentation stimulation protein Atu1606 PF00557 Metallopeptidase family M24 Atu1607 PF04002 RadC-like JAB domain Atu1608 PF07811 Atu1608 Atu1609 PF09977 Atu1609 Atu1610 PF01474 Class-II DAHP synthetase family Atu1611 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu1611 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1613 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Atu1614 PF13419 Haloacid dehalogenase-like hydrolase Atu1615 PF01471 Putative peptidoglycan binding domain Atu1615 PF03734 L,D-transpeptidase catalytic domain Atu1616 PF00206 Lyase Atu1616 PF10415 Fumarase C C-terminus Atu1617 PF07859 alpha/beta hydrolase fold Atu1618 PF00117 Glutamine amidotransferase class-I Atu1618 PF06418 CTP synthase N-terminus Atu1619 PF03840 Preprotein translocase SecG subunit Atu1620 PF00121 Triosephosphate isomerase Atu1621 PF01738 Dienelactone hydrolase family Atu1622 PF00204 DNA gyrase B Atu1622 PF00986 DNA gyrase B subunit, carboxyl terminus Atu1622 PF01751 Toprim domain Atu1622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1623 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1624 PF00440 Bacterial regulatory proteins, tetR family Atu1624 PF14246 AefR-like transcriptional repressor, C-terminal region Atu1625 PF08241 Methyltransferase domain Atu1626 PF01370 NAD dependent epimerase/dehydratase family Atu1627 PF00574 Clp protease Atu1629 PF12840 Helix-turn-helix domain Atu1630 PF13091 PLD-like domain Atu1631 PF00072 Response regulator receiver domain Atu1632 PF01266 FAD dependent oxidoreductase Atu1632 PF01571 Aminomethyltransferase folate-binding domain Atu1632 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu1632 PF16350 Atu1632 Atu1633 PF00924 Mechanosensitive ion channel Atu1634 PF04226 Atu1634 Atu1643 PF05232 Atu1643 Atu1644 PF03886 Protein of unknown function (DUF330) Atu1645 PF02470 Atu1645 Atu1646 PF00005 ABC transporter Atu1647 PF02405 Atu1647 Atu1647 PF13466 STAS domain Atu1648 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu1648 PF13378 Enolase C-terminal domain-like Atu1649 PF12850 Calcineurin-like phosphoesterase superfamily domain Atu1650 PF01757 Atu1650 Atu1652 PF00390 Malic enzyme, N-terminal domain Atu1652 PF01515 Phosphate acetyl/butaryl transferase Atu1652 PF03949 Malic enzyme, NAD binding domain Atu1653 PF11064 Atu1653 Atu1654 PF00881 Nitroreductase family Atu1656 PF07676 WD40-like Beta Propeller Repeat Atu1657 PF00795 Carbon-nitrogen hydrolase Atu1657 PF02540 NAD synthase Atu1658 PF00884 Sulfatase Atu1659 PF06210 Atu1659 Atu1661 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu1661 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1663 PF00795 Carbon-nitrogen hydrolase Atu1664 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Atu1664 PF05697 Bacterial trigger factor protein (TF) Atu1664 PF05698 Bacterial trigger factor protein (TF) C-terminus Atu1667 PF06568 Atu1667 Atu1669 PF01134 Glucose inhibited division protein A Atu1670 PF00107 Zinc-binding dehydrogenase Atu1670 PF08240 Alcohol dehydrogenase GroES-like domain Atu1672 PF00501 AMP-binding enzyme Atu1672 PF13193 AMP-binding enzyme C-terminal domain Atu1673 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Atu1673 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Atu1675 PF00196 Bacterial regulatory proteins, luxR family Atu1676 PF00425 chorismate binding enzyme Atu1677 PF01702 Queuine tRNA-ribosyltransferase Atu1678 PF02547 Queuosine biosynthesis protein Atu1679 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Atu1680 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Atu1681 PF01467 Cytidylyltransferase Atu1686 PF13145 PPIC-type PPIASE domain Atu1686 PF13624 SurA N-terminal domain Atu1687 PF00591 Glycosyl transferase family, a/b domain Atu1687 PF02885 Glycosyl transferase family, helical bundle domain Atu1688 PF00218 Indole-3-glycerol phosphate synthase Atu1689 PF01967 MoaC family Atu1690 PF00994 Probable molybdopterin binding domain Atu1690 PF03453 MoeA N-terminal region (domain I and II) Atu1690 PF03454 MoeA C-terminal region (domain IV) Atu1691 PF00990 GGDEF domain Atu1692 PF01243 Pyridoxamine 5'-phosphate oxidase Atu1693 PF00999 Sodium/hydrogen exchanger family Atu1693 PF02254 TrkA-N domain Atu1694 PF06155 Protein of unknown function (DUF971) Atu1695 PF04055 Radical SAM superfamily Atu1695 PF06463 Molybdenum Cofactor Synthesis C Atu1695 PF13353 4Fe-4S single cluster domain Atu1696 PF00892 EamA-like transporter family Atu1697 PF07690 Major Facilitator Superfamily Atu1698 PF12804 MobA-like NTP transferase domain Atu1699 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Atu1700 PF01476 LysM domain Atu1700 PF01551 Peptidase family M23 Atu1701 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Atu1702 PF01975 Survival protein SurE Atu1703 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atu1703 PF02403 Seryl-tRNA synthetase N-terminal domain Atu1704 PF00902 Sec-independent protein translocase protein (TatC) Atu1705 PF02416 mttA/Hcf106 family Atu1706 PF02416 mttA/Hcf106 family Atu1707 PF04079 Putative transcriptional regulators (Ypuh-like) Atu1708 PF02616 ScpA/B protein Atu1709 PF00933 Glycosyl hydrolase family 3 N terminal domain Atu1710 PF05036 Sporulation related domain Atu1711 PF00750 tRNA synthetases class I (R) Atu1711 PF03485 Arginyl tRNA synthetase N terminal domain Atu1711 PF05746 DALR anticodon binding domain Atu1712 PF01966 HD domain Atu1712 PF13286 Phosphohydrolase-associated domain Atu1713 PF01521 Iron-sulphur cluster biosynthesis Atu1714 PF03372 Endonuclease/Exonuclease/phosphatase family Atu1715 PF08238 Sel1 repeat Atu1717 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Atu1719 PF00133 tRNA synthetases class I (I, L, M and V) Atu1719 PF08264 Anticodon-binding domain of tRNA Atu1719 PF10458 Valyl tRNA synthetase tRNA binding arm Atu1720 PF10691 Atu1720 Atu1721 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Atu1728 PF03358 NADPH-dependent FMN reductase Atu1729 PF00994 Probable molybdopterin binding domain Atu1730 PF00582 Universal stress protein family Atu1731 PF00156 Phosphoribosyl transferase domain Atu1733 PF02867 Ribonucleotide reductase, barrel domain Atu1733 PF08471 Atu1733 Atu1735 PF01381 Helix-turn-helix Atu1736 PF01566 Atu1736 Atu1738 PF00005 ABC transporter Atu1738 PF00664 ABC transporter transmembrane region Atu1739 PF01594 Atu1739 Atu1740 PF00583 Acetyltransferase (GNAT) family Atu1742 PF10098 Atu1742 Atu1743 PF01613 Flavin reductase like domain Atu1744 PF00881 Nitroreductase family Atu1746 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atu1746 PF02824 TGS domain Atu1746 PF03129 Anticodon binding domain Atu1746 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atu1747 PF01809 Atu1747 Atu1748 PF01592 NifU-like N terminal domain Atu1749 PF01227 GTP cyclohydrolase I Atu1750 PF01502 Phosphoribosyl-AMP cyclohydrolase Atu1751 PF01734 Patatin-like phospholipase Atu1752 PF00571 CBS domain Atu1753 PF01694 Rhomboid family Atu1754 PF07310 Atu1754 Atu1757 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP Atu1758 PF07370 Atu1758 Atu1759 PF03313 Atu1759 Atu1759 PF03315 Serine dehydratase beta chain Atu1762 PF09992 Predicted periplasmic protein (DUF2233) Atu1763 PF00551 Formyl transferase Atu1764 PF02219 Methylenetetrahydrofolate reductase Atu1765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu1765 PF03466 LysR substrate binding domain Atu1767 PF01965 DJ-1/PfpI family Atu1767 PF12833 Helix-turn-helix domain Atu1768 PF01256 Carbohydrate kinase Atu1768 PF03853 YjeF-related protein N-terminus Atu1769 PF00543 Nitrogen regulatory protein P-II Atu1770 PF00120 Glutamine synthetase, catalytic domain Atu1770 PF03951 Glutamine synthetase, beta-Grasp domain Atu1771 PF00892 EamA-like transporter family Atu1773 PF06776 Invasion associated locus B (IalB) protein Atu1774 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu1775 PF01323 DSBA-like thioredoxin domain Atu1776 PF00892 EamA-like transporter family Atu1778 PF00270 DEAD/DEAH box helicase Atu1778 PF00271 Helicase conserved C-terminal domain Atu1778 PF02559 CarD-like/TRCF domain Atu1778 PF03461 TRCF domain Atu1779 PF03937 Flavinator of succinate dehydrogenase Atu1780 PF00270 DEAD/DEAH box helicase Atu1780 PF00271 Helicase conserved C-terminal domain Atu1780 PF17191 Atu1780 Atu1782 PF05016 Plasmid stabilisation system protein Atu1783 PF01402 Ribbon-helix-helix protein, copG family Atu1784 PF04367 Atu1784 Atu1785 PF13508 Acetyltransferase (GNAT) domain Atu1786 PF01380 SIS domain Atu1786 PF13522 Glutamine amidotransferase domain Atu1787 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1787 PF12804 MobA-like NTP transferase domain Atu1787 PF14602 Hexapeptide repeat of succinyl-transferase Atu1788 PF00392 Bacterial regulatory proteins, gntR family Atu1788 PF07729 FCD domain Atu1789 PF02608 Basic membrane protein Atu1790 PF02653 Atu1790 Atu1791 PF02653 Atu1791 Atu1792 PF00005 ABC transporter Atu1794 PF01494 FAD binding domain Atu1795 PF03547 Atu1795 Atu1796 PF02683 Atu1796 Atu1798 PF12796 Ankyrin repeats (3 copies) Atu1799 PF01755 Atu1799 Atu1800 PF08291 Peptidase M15 Atu1802 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu1803 PF00313 'Cold-shock' DNA-binding domain Atu1804 PF02643 Uncharacterized ACR, COG1430 Atu1805 PF04972 BON domain Atu1808 PF13506 Glycosyl transferase family 21 Atu1810 PF04800 ETC complex I subunit conserved region Atu1813 PF02082 Transcriptional regulator Atu1814 PF00561 alpha/beta hydrolase fold Atu1815 PF16576 Atu1815 Atu1816 PF00005 ABC transporter Atu1817 PF02687 Atu1817 Atu1817 PF12704 MacB-like periplasmic core domain Atu1819 PF01521 Iron-sulphur cluster biosynthesis Atu1820 PF01883 Domain of unknown function DUF59 Atu1821 PF00266 Aminotransferase class-V Atu1822 PF01458 Uncharacterized protein family (UPF0051) Atu1823 PF00005 ABC transporter Atu1824 PF01458 Uncharacterized protein family (UPF0051) Atu1825 PF00266 Aminotransferase class-V Atu1826 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Atu1827 PF03702 Uncharacterised protein family (UPF0075) Atu1828 PF00579 tRNA synthetases class I (W and Y) Atu1830 PF00578 AhpC/TSA family Atu1831 PF04305 Atu1831 Atu1832 PF01551 Peptidase family M23 Atu1833 PF00270 DEAD/DEAH box helicase Atu1833 PF00271 Helicase conserved C-terminal domain Atu1834 PF00293 NUDIX domain Atu1837 PF12844 Helix-turn-helix domain Atu1838 PF13458 Periplasmic binding protein Atu1839 PF00834 Ribulose-phosphate 3 epimerase family Atu1841 PF00206 Lyase Atu1841 PF10397 Adenylosuccinate lyase C-terminus Atu1842 PF06821 Serine hydrolase Atu1843 PF01259 SAICAR synthetase Atu1844 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Atu1845 PF13507 CobB/CobQ-like glutamine amidotransferase domain Atu1847 PF06568 Atu1847 Atu1848 PF00155 Aminotransferase class I and II Atu1848 PF00392 Bacterial regulatory proteins, gntR family Atu1849 PF09411 Lipid A 3-O-deacylase (PagL) Atu1850 PF00586 AIR synthase related protein, N-terminal domain Atu1850 PF02769 AIR synthase related protein, C-terminal domain Atu1851 PF01722 BolA-like protein Atu1854 PF00462 Glutaredoxin Atu1855 PF07690 Major Facilitator Superfamily Atu1856 PF00459 Inositol monophosphatase family Atu1857 PF00459 Inositol monophosphatase family Atu1858 PF01171 PP-loop family Atu1859 PF04960 Glutaminase Atu1860 PF00163 Ribosomal protein S4/S9 N-terminal domain Atu1860 PF01479 S4 domain Atu1861 PF03741 Atu1861 Atu1862 PF01935 Domain of unknown function DUF87 Atu1863 PF00892 EamA-like transporter family Atu1864 PF01810 Atu1864 Atu1867 PF01177 Asp/Glu/Hydantoin racemase Atu1868 PF00588 SpoU rRNA Methylase family Atu1870 PF00180 Isocitrate/isopropylmalate dehydrogenase Atu1871 PF13417 Glutathione S-transferase, N-terminal domain Atu1872 PF12681 Glyoxalase-like domain Atu1873 PF01411 tRNA synthetases class II (A) Atu1873 PF02272 DHHA1 domain Atu1873 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atu1874 PF00154 recA bacterial DNA recombination protein Atu1875 PF00294 pfkB family carbohydrate kinase Atu1876 PF04227 Indigoidine synthase A like protein Atu1877 PF00691 OmpA family Atu1879 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1880 PF00528 Binding-protein-dependent transport system inner membrane component Atu1881 PF00528 Binding-protein-dependent transport system inner membrane component Atu1882 PF06233 Atu1882 Atu1883 PF00515 Tetratricopeptide repeat Atu1883 PF13489 Methyltransferase domain Atu1884 PF13379 NMT1-like family Atu1885 PF01037 AsnC family Atu1885 PF13412 Winged helix-turn-helix DNA-binding Atu1886 PF03167 Uracil DNA glycosylase superfamily Atu1887 PF00565 Staphylococcal nuclease homologue Atu1888 PF00512 His Kinase A (phospho-acceptor) domain Atu1888 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1889 PF01219 Prokaryotic diacylglycerol kinase Atu1890 PF02277 Phosphoribosyltransferase Atu1891 PF02654 Atu1891 Atu1892 PF06945 Atu1892 Atu1893 PF13975 Atu1893 Atu1895 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Atu1897 PF13561 Enoyl-(Acyl carrier protein) reductase Atu1898 PF00005 ABC transporter Atu1899 PF13407 Periplasmic binding protein domain Atu1900 PF02653 Atu1900 Atu1901 PF00456 Transketolase, thiamine diphosphate binding domain Atu1902 PF02779 Transketolase, pyrimidine binding domain Atu1902 PF02780 Transketolase, C-terminal domain Atu1903 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Atu1903 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Atu1904 PF04198 Putative sugar-binding domain Atu1904 PF12802 MarR family Atu1905 PF13561 Enoyl-(Acyl carrier protein) reductase Atu1906 PF01061 Atu1906 Atu1907 PF00005 ABC transporter Atu1908 PF01925 Atu1908 Atu1910 PF06904 Atu1910 Atu1912 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu1912 PF00672 HAMP domain Atu1912 PF17200 Atu1912 Atu1913 PF08980 Domain of unknown function (DUF1883) Atu1914 PF00004 ATPase family associated with various cellular activities (AAA) Atu1914 PF12002 MgsA AAA+ ATPase C terminal Atu1914 PF16193 Atu1914 Atu1915 PF13180 PDZ domain Atu1915 PF13365 Trypsin-like peptidase domain Atu1917 PF00144 Beta-lactamase Atu1918 PF00920 Dehydratase family Atu1919 PF00174 Oxidoreductase molybdopterin binding domain Atu1920 PF01794 Atu1920 Atu1921 PF05675 Atu1921 Atu1922 PF01196 Ribosomal protein L17 Atu1923 PF01000 RNA polymerase Rpb3/RpoA insert domain Atu1923 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Atu1923 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Atu1924 PF00411 Ribosomal protein S11 Atu1925 PF00416 Ribosomal protein S13/S18 Atu1926 PF00406 Adenylate kinase Atu1927 PF00344 SecY translocase Atu1928 PF00828 Ribosomal protein L18e/L15 Atu1929 PF00333 Ribosomal protein S5, N-terminal domain Atu1929 PF03719 Ribosomal protein S5, C-terminal domain Atu1930 PF00861 Ribosomal L18p/L5e family Atu1931 PF00347 Ribosomal protein L6 Atu1932 PF00410 Ribosomal protein S8 Atu1933 PF00253 Ribosomal protein S14p/S29e Atu1934 PF00281 Ribosomal protein L5 Atu1934 PF00673 ribosomal L5P family C-terminus Atu1935 PF00467 KOW motif Atu1935 PF17136 Atu1935 Atu1936 PF00238 Ribosomal protein L14p/L23e Atu1937 PF00366 Ribosomal protein S17 Atu1938 PF00831 Ribosomal L29 protein Atu1939 PF00252 Ribosomal protein L16p/L10e Atu1940 PF00189 Ribosomal protein S3, C-terminal domain Atu1940 PF07650 KH domain Atu1941 PF00237 Ribosomal protein L22p/L17e Atu1942 PF00203 Ribosomal protein S19 Atu1943 PF00181 Ribosomal Proteins L2, RNA binding domain Atu1943 PF03947 Ribosomal Proteins L2, C-terminal domain Atu1944 PF00276 Ribosomal protein L23 Atu1945 PF00573 Ribosomal protein L4/L1 family Atu1946 PF00297 Ribosomal protein L3 Atu1947 PF00338 Ribosomal protein S10p/S20e Atu1948 PF00009 Elongation factor Tu GTP binding domain Atu1948 PF03143 Elongation factor Tu C-terminal domain Atu1948 PF03144 Elongation factor Tu domain 2 Atu1949 PF00009 Elongation factor Tu GTP binding domain Atu1949 PF00679 Elongation factor G C-terminus Atu1949 PF03144 Elongation factor Tu domain 2 Atu1949 PF03764 Elongation factor G, domain IV Atu1949 PF14492 Elongation Factor G, domain II Atu1950 PF00177 Ribosomal protein S7p/S5e Atu1951 PF00164 Ribosomal protein S12/S23 Atu1953 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu1954 PF00196 Bacterial regulatory proteins, luxR family Atu1955 PF00623 RNA polymerase Rpb1, domain 2 Atu1955 PF04983 RNA polymerase Rpb1, domain 3 Atu1955 PF04997 RNA polymerase Rpb1, domain 1 Atu1955 PF04998 RNA polymerase Rpb1, domain 5 Atu1955 PF05000 RNA polymerase Rpb1, domain 4 Atu1956 PF00562 RNA polymerase Rpb2, domain 6 Atu1956 PF04560 RNA polymerase Rpb2, domain 7 Atu1956 PF04561 RNA polymerase Rpb2, domain 2 Atu1956 PF04563 RNA polymerase beta subunit Atu1956 PF04565 RNA polymerase Rpb2, domain 3 Atu1956 PF10385 RNA polymerase beta subunit external 1 domain Atu1957 PF00542 Ribosomal protein L7/L12 C-terminal domain Atu1957 PF16320 Atu1957 Atu1958 PF00466 Ribosomal protein L10 Atu1959 PF00687 Ribosomal protein L1p/L10e family Atu1960 PF00298 Ribosomal protein L11, RNA binding domain Atu1960 PF03946 Ribosomal protein L11, N-terminal domain Atu1961 PF00467 KOW motif Atu1961 PF02357 Transcription termination factor nusG Atu1962 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Atu1965 PF01370 NAD dependent epimerase/dehydratase family Atu1966 PF00009 Elongation factor Tu GTP binding domain Atu1966 PF03143 Elongation factor Tu C-terminal domain Atu1966 PF03144 Elongation factor Tu domain 2 Atu1967 PF03741 Atu1967 Atu1969 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme Atu1972 PF07886 Atu1972 Atu1974 PF02353 Mycolic acid cyclopropane synthetase Atu1975 PF06966 Atu1975 Atu1977 PF01593 Flavin containing amine oxidoreductase Atu1978 PF07103 Atu1978 Atu1979 PF02353 Mycolic acid cyclopropane synthetase Atu1980 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) Atu1981 PF09945 Atu1981 Atu1982 PF04542 Sigma-70 region 2 Atu1982 PF08281 Sigma-70, region 4 Atu1983 PF10099 Atu1983 Atu1984 PF00072 Response regulator receiver domain Atu1984 PF07568 Atu1984 Atu1984 PF13581 Histidine kinase-like ATPase domain Atu1985 PF00072 Response regulator receiver domain Atu1986 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1986 PF05227 CHASE3 domain Atu1987 PF00072 Response regulator receiver domain Atu1988 PF00072 Response regulator receiver domain Atu1988 PF07536 Atu1988 Atu1989 PF00072 Response regulator receiver domain Atu1990 PF00360 Phytochrome region Atu1990 PF00512 His Kinase A (phospho-acceptor) domain Atu1990 PF01590 GAF domain Atu1990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1990 PF08446 PAS fold Atu1993 PF00588 SpoU rRNA Methylase family Atu1993 PF08032 RNA 2'-O ribose methyltransferase substrate binding Atu1994 PF03061 Thioesterase superfamily Atu1997 PF03413 Peptidase propeptide and YPEB domain Atu1997 PF03929 Atu1997 Atu1998 PF12680 SnoaL-like domain Atu1999 PF13460 NADH(P)-binding Atu2000 PF01638 HxlR-like helix-turn-helix Atu2001 PF00271 Helicase conserved C-terminal domain Atu2001 PF02151 UvrB/uvrC motif Atu2001 PF04851 Type III restriction enzyme, res subunit Atu2001 PF12344 Ultra-violet resistance protein B Atu2002 PF00756 Putative esterase Atu2003 PF08818 Domain of unknown function (DU1801) Atu2004 PF05239 PRC-barrel domain Atu2005 PF06037 Atu2005 Atu2006 PF00226 DnaJ domain Atu2010 PF00990 GGDEF domain Atu2012 PF00005 ABC transporter Atu2012 PF08402 TOBE domain Atu2013 PF00528 Binding-protein-dependent transport system inner membrane component Atu2014 PF13343 Bacterial extracellular solute-binding protein Atu2015 PF00155 Aminotransferase class I and II Atu2016 PF05025 RbsD / FucU transport protein family Atu2017 PF06769 Plasmid encoded toxin Txe Atu2018 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Atu2019 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Atu2019 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain Atu2020 PF00440 Bacterial regulatory proteins, tetR family Atu2021 PF06719 Atu2021 Atu2021 PF12833 Helix-turn-helix domain Atu2022 PF00107 Zinc-binding dehydrogenase Atu2022 PF08240 Alcohol dehydrogenase GroES-like domain Atu2023 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu2024 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Atu2025 PF00196 Bacterial regulatory proteins, luxR family Atu2025 PF13411 MerR HTH family regulatory protein Atu2026 PF13538 UvrD-like helicase C-terminal domain Atu2026 PF13604 AAA domain Atu2028 PF12840 Helix-turn-helix domain Atu2029 PF03640 Atu2029 Atu2030 PF04542 Sigma-70 region 2 Atu2030 PF08281 Sigma-70, region 4 Atu2032 PF00248 Aldo/keto reductase family Atu2033 PF08327 Activator of Hsp90 ATPase homolog 1-like protein Atu2034 PF12840 Helix-turn-helix domain Atu2035 PF01842 ACT domain Atu2035 PF10369 Small subunit of acetolactate synthase Atu2036 PF00205 Thiamine pyrophosphate enzyme, central domain Atu2036 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atu2036 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Atu2038 PF01935 Domain of unknown function DUF87 Atu2039 PF01715 IPP transferase Atu2040 PF12710 haloacid dehalogenase-like hydrolase Atu2041 PF13302 Acetyltransferase (GNAT) domain Atu2042 PF13561 Enoyl-(Acyl carrier protein) reductase Atu2043 PF13180 PDZ domain Atu2043 PF13365 Trypsin-like peptidase domain Atu2044 PF01145 SPFH domain / Band 7 family Atu2045 PF01145 SPFH domain / Band 7 family Atu2045 PF12221 Atu2045 Atu2046 PF00186 Dihydrofolate reductase Atu2047 PF00303 Thymidylate synthase Atu2051 PF13467 Ribbon-helix-helix domain Atu2052 PF05170 Atu2052 Atu2052 PF13502 Atu2052 Atu2053 PF01565 FAD binding domain Atu2053 PF02913 FAD linked oxidases, C-terminal domain Atu2054 PF00873 AcrB/AcrD/AcrF family Atu2055 PF16576 Atu2055 Atu2056 PF02627 Carboxymuconolactone decarboxylase family Atu2057 PF00580 UvrD/REP helicase N-terminal domain Atu2057 PF13361 UvrD-like helicase C-terminal domain Atu2058 PF01755 Atu2058 Atu2059 PF00440 Bacterial regulatory proteins, tetR family Atu2059 PF13977 Bacterial transcriptional repressor Atu2060 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu2061 PF12146 Putative lysophospholipase Atu2062 PF04657 Atu2062 Atu2063 PF04657 Atu2063 Atu2064 PF10908 Atu2064 Atu2066 PF00857 Isochorismatase family Atu2067 PF09932 Atu2067 Atu2068 PF03591 Atu2068 Atu2069 PF05437 Atu2069 Atu2070 PF00557 Metallopeptidase family M24 Atu2070 PF01321 Creatinase/Prolidase N-terminal domain Atu2070 PF16188 Atu2070 Atu2070 PF16189 Atu2070 Atu2072 PF06325 Ribosomal protein L11 methyltransferase (PrmA) Atu2073 PF02630 SCO1/SenC Atu2075 PF01584 CheW-like domain Atu2076 PF05981 Atu2076 Atu2077 PF00929 Exonuclease Atu2078 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2078 PF03466 LysR substrate binding domain Atu2079 PF00892 EamA-like transporter family Atu2080 PF00583 Acetyltransferase (GNAT) family Atu2081 PF01636 Phosphotransferase enzyme family Atu2082 PF00533 BRCA1 C Terminus (BRCT) domain Atu2082 PF01653 NAD-dependent DNA ligase adenylation domain Atu2082 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Atu2082 PF03120 NAD-dependent DNA ligase OB-fold domain Atu2082 PF12826 Helix-hairpin-helix motif Atu2083 PF02463 RecF/RecN/SMC N terminal domain Atu2084 PF13525 Outer membrane lipoprotein Atu2085 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Atu2086 PF00091 Tubulin/FtsZ family, GTPase domain Atu2086 PF12327 FtsZ family, C-terminal domain Atu2087 PF02491 SHS2 domain inserted in FTSA Atu2087 PF14450 Cell division protein FtsA Atu2088 PF03799 Cell division protein FtsQ Atu2088 PF08478 POTRA domain, FtsQ-type Atu2089 PF01820 D-ala D-ala ligase N-terminus Atu2089 PF07478 D-ala D-ala ligase C-terminus Atu2090 PF00083 Sugar (and other) transporter Atu2091 PF00990 GGDEF domain Atu2092 PF01565 FAD binding domain Atu2092 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Atu2093 PF01225 Mur ligase family, catalytic domain Atu2093 PF02875 Mur ligase family, glutamate ligase domain Atu2093 PF08245 Mur ligase middle domain Atu2094 PF03033 Glycosyltransferase family 28 N-terminal domain Atu2094 PF04101 Glycosyltransferase family 28 C-terminal domain Atu2095 PF01098 Atu2095 Atu2096 PF02875 Mur ligase family, glutamate ligase domain Atu2096 PF08245 Mur ligase middle domain Atu2097 PF00953 Glycosyl transferase family 4 Atu2097 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Atu2098 PF01225 Mur ligase family, catalytic domain Atu2098 PF02875 Mur ligase family, glutamate ligase domain Atu2098 PF08245 Mur ligase middle domain Atu2099 PF01225 Mur ligase family, catalytic domain Atu2099 PF02875 Mur ligase family, glutamate ligase domain Atu2099 PF08245 Mur ligase middle domain Atu2100 PF00905 Penicillin binding protein transpeptidase domain Atu2100 PF03717 Penicillin-binding Protein dimerisation domain Atu2102 PF01795 MraW methylase family Atu2103 PF02381 MraZ protein Atu2104 PF03994 Atu2104 Atu2105 PF06693 Atu2105 Atu2107 PF00665 Integrase core domain Atu2107 PF01527 Transposase Atu2107 PF13276 Atu2107 Atu2110 PF01266 FAD dependent oxidoreductase Atu2111 PF01266 FAD dependent oxidoreductase Atu2112 PF01464 Transglycosylase SLT domain Atu2113 PF01471 Putative peptidoglycan binding domain Atu2113 PF01510 N-acetylmuramoyl-L-alanine amidase Atu2114 PF00226 DnaJ domain Atu2114 PF05099 Tellurite resistance protein TerB Atu2115 PF00365 Phosphofructokinase Atu2116 PF01810 Atu2116 Atu2117 PF01464 Transglycosylase SLT domain Atu2119 PF11899 Atu2119 Atu2120 PF13649 Methyltransferase domain Atu2121 PF01183 Glycosyl hydrolases family 25 Atu2122 PF01471 Putative peptidoglycan binding domain Atu2122 PF13406 Transglycosylase SLT domain Atu2123 PF02219 Methylenetetrahydrofolate reductase Atu2124 PF01022 Bacterial regulatory protein, arsR family Atu2124 PF08241 Methyltransferase domain Atu2125 PF00005 ABC transporter Atu2125 PF12848 ABC transporter Atu2126 PF12146 Putative lysophospholipase Atu2127 PF02515 CoA-transferase family III Atu2128 PF00205 Thiamine pyrophosphate enzyme, central domain Atu2128 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atu2128 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Atu2129 PF13883 Pyridoxamine 5'-phosphate oxidase Atu2130 PF01042 Endoribonuclease L-PSP Atu2131 PF04273 Putative phosphatase (DUF442) Atu2132 PF14486 Domain of unknown function (DUF4432) Atu2133 PF03734 L,D-transpeptidase catalytic domain Atu2134 PF07690 Major Facilitator Superfamily Atu2135 PF00440 Bacterial regulatory proteins, tetR family Atu2136 PF07015 VirC1 protein Atu2138 PF00465 Iron-containing alcohol dehydrogenase Atu2139 PF00171 Aldehyde dehydrogenase family Atu2141 PF01381 Helix-turn-helix Atu2142 PF00120 Glutamine synthetase, catalytic domain Atu2143 PF13520 Amino acid permease Atu2144 PF05013 N-formylglutamate amidohydrolase Atu2145 PF01380 SIS domain Atu2145 PF01418 Helix-turn-helix domain, rpiR family Atu2147 PF13343 Bacterial extracellular solute-binding protein Atu2148 PF00528 Binding-protein-dependent transport system inner membrane component Atu2149 PF00528 Binding-protein-dependent transport system inner membrane component Atu2150 PF00005 ABC transporter Atu2150 PF08402 TOBE domain Atu2151 PF00107 Zinc-binding dehydrogenase Atu2151 PF08240 Alcohol dehydrogenase GroES-like domain Atu2153 PF13304 AAA domain Atu2153 PF13476 AAA domain Atu2154 PF07690 Major Facilitator Superfamily Atu2155 PF00809 Pterin binding enzyme Atu2155 PF02310 B12 binding domain Atu2155 PF02574 Homocysteine S-methyltransferase Atu2155 PF02607 B12 binding domain Atu2155 PF02965 Vitamin B12 dependent methionine synthase, activation domain Atu2156 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Atu2157 PF13350 Tyrosine phosphatase family Atu2159 PF13505 Outer membrane protein beta-barrel domain Atu2162 PF04402 Protein of unknown function (DUF541) Atu2164 PF01894 Uncharacterised protein family UPF0047 Atu2165 PF00072 Response regulator receiver domain Atu2165 PF00360 Phytochrome region Atu2165 PF01590 GAF domain Atu2165 PF07536 Atu2165 Atu2165 PF08446 PAS fold Atu2166 PF06059 Atu2166 Atu2167 PF00140 Sigma-70 factor, region 1 Atu2167 PF03979 Sigma-70 factor, region 1 Atu2167 PF04539 Sigma-70 region 3 Atu2167 PF04542 Sigma-70 region 2 Atu2167 PF04545 Sigma-70, region 4 Atu2167 PF04546 Sigma-70, non-essential region Atu2168 PF01807 CHC2 zinc finger Atu2168 PF08275 DNA primase catalytic core, N-terminal domain Atu2168 PF10410 DnaB-helicase binding domain of primase Atu2168 PF13662 Toprim domain Atu2169 PF09424 Yqey-like protein Atu2170 PF00117 Glutamine amidotransferase class-I Atu2170 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Atu2171 PF00561 alpha/beta hydrolase fold Atu2172 PF01554 MatE Atu2173 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu2173 PF02743 Cache domain Atu2174 PF11158 Atu2174 Atu2175 PF04228 Atu2175 Atu2176 PF10067 Atu2176 Atu2177 PF04397 LytTr DNA-binding domain Atu2178 PF02142 MGS-like domain Atu2178 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu2178 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Atu2179 PF00990 GGDEF domain Atu2180 PF03167 Uracil DNA glycosylase superfamily Atu2180 PF13566 Atu2180 Atu2182 PF01272 Transcription elongation factor, GreA/GreB, C-term Atu2182 PF03449 Transcription elongation factor, N-terminal Atu2183 PF00534 Glycosyl transferases group 1 Atu2184 PF01037 AsnC family Atu2184 PF13412 Winged helix-turn-helix DNA-binding Atu2185 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu2186 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2186 PF03466 LysR substrate binding domain Atu2187 PF12840 Helix-turn-helix domain Atu2188 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Atu2190 PF13460 NADH(P)-binding Atu2191 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2191 PF03466 LysR substrate binding domain Atu2193 PF09954 Atu2193 Atu2195 PF01699 Sodium/calcium exchanger protein Atu2196 PF00155 Aminotransferase class I and II Atu2197 PF00563 EAL domain Atu2199 PF00892 EamA-like transporter family Atu2200 PF00313 'Cold-shock' DNA-binding domain Atu2201 PF00753 Metallo-beta-lactamase superfamily Atu2203 PF06823 Atu2203 Atu2203 PF08239 Bacterial SH3 domain Atu2205 PF12802 MarR family Atu2206 PF00072 Response regulator receiver domain Atu2206 PF00486 Transcriptional regulatory protein, C terminal Atu2207 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2208 PF01588 Putative tRNA binding domain Atu2209 PF03807 NADP oxidoreductase coenzyme F420-dependent Atu2209 PF14748 Pyrroline-5-carboxylate reductase dimerisation Atu2213 PF01790 Atu2213 Atu2214 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase Atu2215 PF02578 Multi-copper polyphenol oxidoreductase laccase Atu2216 PF00557 Metallopeptidase family M24 Atu2216 PF01321 Creatinase/Prolidase N-terminal domain Atu2218 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Atu2218 PF14572 Phosphoribosyl synthetase-associated domain Atu2220 PF13231 Atu2220 Atu2221 PF07578 Lipid A Biosynthesis N-terminal domain Atu2222 PF00535 Glycosyl transferase family 2 Atu2223 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu2224 PF00171 Aldehyde dehydrogenase family Atu2225 PF01590 GAF domain Atu2225 PF02954 Bacterial regulatory protein, Fis family Atu2226 PF00563 EAL domain Atu2226 PF00990 GGDEF domain Atu2226 PF03707 Atu2226 Atu2227 PF01386 Ribosomal L25p family Atu2227 PF14693 Ribosomal protein TL5, C-terminal domain Atu2228 PF00563 EAL domain Atu2228 PF00672 HAMP domain Atu2228 PF00989 PAS fold Atu2228 PF00990 GGDEF domain Atu2229 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu2230 PF01195 Peptidyl-tRNA hydrolase Atu2231 PF00583 Acetyltransferase (GNAT) family Atu2232 PF02617 ATP-dependent Clp protease adaptor protein ClpS Atu2233 PF01926 50S ribosome-binding GTPase Atu2233 PF06071 Protein of unknown function (DUF933) Atu2234 PF01575 MaoC like domain Atu2235 PF01575 MaoC like domain Atu2236 PF00156 Phosphoribosyl transferase domain Atu2237 PF02167 Cytochrome C1 family Atu2238 PF00032 Cytochrome b(C-terminal)/b6/petD Atu2238 PF00033 Cytochrome b(N-terminal)/b6/petB Atu2239 PF00355 Rieske [2Fe-2S] domain Atu2239 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Atu2240 PF03372 Endonuclease/Exonuclease/phosphatase family Atu2241 PF00005 ABC transporter Atu2241 PF00664 ABC transporter transmembrane region Atu2242 PF00005 ABC transporter Atu2242 PF00664 ABC transporter transmembrane region Atu2243 PF00149 Calcineurin-like phosphoesterase Atu2244 PF00588 SpoU rRNA Methylase family Atu2245 PF01895 PhoU domain Atu2245 PF02690 Atu2245 Atu2247 PF01218 Coproporphyrinogen III oxidase Atu2249 PF06348 Atu2249 Atu2250 PF01743 Poly A polymerase head domain Atu2250 PF12627 Probable RNA and SrmB- binding site of polymerase A Atu2251 PF00293 NUDIX domain Atu2252 PF06938 Protein of unknown function (DUF1285) Atu2253 PF07726 ATPase family associated with various cellular activities (AAA) Atu2254 PF01882 Atu2254 Atu2258 PF13673 Acetyltransferase (GNAT) domain Atu2259 PF07690 Major Facilitator Superfamily Atu2260 PF00583 Acetyltransferase (GNAT) family Atu2261 PF13409 Glutathione S-transferase, N-terminal domain Atu2261 PF13410 Glutathione S-transferase, C-terminal domain Atu2262 PF00293 NUDIX domain Atu2263 PF00149 Calcineurin-like phosphoesterase Atu2264 PF00682 HMGL-like Atu2264 PF08502 LeuA allosteric (dimerisation) domain Atu2265 PF03594 Atu2265 Atu2266 PF13449 Esterase-like activity of phytase Atu2267 PF06532 Atu2267 Atu2268 PF04542 Sigma-70 region 2 Atu2268 PF08281 Sigma-70, region 4 Atu2270 PF00574 Clp protease Atu2271 PF04955 Atu2271 Atu2272 PF09849 Atu2272 Atu2273 PF14489 QueF-like protein Atu2274 PF01545 Cation efflux family Atu2274 PF16916 Atu2274 Atu2276 PF13458 Periplasmic binding protein Atu2277 PF11294 Atu2277 Atu2278 PF01022 Bacterial regulatory protein, arsR family Atu2279 PF00005 ABC transporter Atu2280 PF00528 Binding-protein-dependent transport system inner membrane component Atu2281 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu2282 PF00265 Thymidine kinase Atu2283 PF00127 Copper binding proteins, plastocyanin/azurin family Atu2284 PF10095 Atu2284 Atu2285 PF00196 Bacterial regulatory proteins, luxR family Atu2285 PF03472 Autoinducer binding domain Atu2286 PF03350 Atu2286 Atu2287 PF00593 TonB dependent receptor Atu2287 PF07715 TonB-dependent Receptor Plug Domain Atu2288 PF06904 Atu2288 Atu2289 PF00117 Glutamine amidotransferase class-I Atu2289 PF00425 chorismate binding enzyme Atu2289 PF04715 Anthranilate synthase component I, N terminal region Atu2290 PF00583 Acetyltransferase (GNAT) family Atu2291 PF01966 HD domain Atu2291 PF11871 Atu2291 Atu2292 PF01979 Amidohydrolase family Atu2292 PF13382 Adenine deaminase C-terminal domain Atu2294 PF00583 Acetyltransferase (GNAT) family Atu2295 PF00128 Alpha amylase, catalytic domain Atu2295 PF16657 Atu2295 Atu2296 PF00294 pfkB family carbohydrate kinase Atu2297 PF13439 Glycosyltransferase Family 4 Atu2297 PF13692 Glycosyl transferases group 1 Atu2299 PF09641 Protein of unknown function (DUF2026) Atu2300 PF01926 50S ribosome-binding GTPase Atu2300 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Atu2301 PF09976 Tetratricopeptide repeat Atu2302 PF07298 Atu2302 Atu2303 PF01522 Polysaccharide deacetylase Atu2304 PF05992 Atu2304 Atu2305 PF06779 Atu2305 Atu2306 PF00557 Metallopeptidase family M24 Atu2307 PF00296 Luciferase-like monooxygenase Atu2308 PF13561 Enoyl-(Acyl carrier protein) reductase Atu2309 PF00941 FAD binding domain in molybdopterin dehydrogenase Atu2309 PF01799 [2Fe-2S] binding domain Atu2309 PF03450 CO dehydrogenase flavoprotein C-terminal domain Atu2310 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Atu2310 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Atu2311 PF02625 XdhC and CoxI family Atu2311 PF13478 XdhC Rossmann domain Atu2312 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2312 PF03466 LysR substrate binding domain Atu2314 PF06181 Atu2314 Atu2315 PF01979 Amidohydrolase family Atu2316 PF01925 Atu2316 Atu2318 PF01070 FMN-dependent dehydrogenase Atu2319 PF00893 Small Multidrug Resistance protein Atu2320 PF00440 Bacterial regulatory proteins, tetR family Atu2321 PF00768 D-alanyl-D-alanine carboxypeptidase Atu2321 PF05036 Sporulation related domain Atu2322 PF12850 Calcineurin-like phosphoesterase superfamily domain Atu2323 PF00576 HIUase/Transthyretin family Atu2324 PF04115 Ureidoglycolate hydrolase Atu2325 PF01934 Protein of unknown function DUF86 Atu2326 PF01909 Nucleotidyltransferase domain Atu2327 PF09349 OHCU decarboxylase Atu2328 PF01522 Polysaccharide deacetylase Atu2329 PF06299 Atu2329 Atu2330 PF01266 FAD dependent oxidoreductase Atu2331 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Atu2332 PF00072 Response regulator receiver domain Atu2332 PF00512 His Kinase A (phospho-acceptor) domain Atu2332 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2332 PF08448 PAS fold Atu2332 PF12860 Atu2332 Atu2333 PF00270 DEAD/DEAH box helicase Atu2333 PF00271 Helicase conserved C-terminal domain Atu2334 PF00892 EamA-like transporter family Atu2335 PF07681 Atu2335 Atu2336 PF03734 L,D-transpeptidase catalytic domain Atu2337 PF00892 EamA-like transporter family Atu2338 PF14403 Atu2338 Atu2339 PF04168 Atu2339 Atu2340 PF01841 Transglutaminase-like superfamily Atu2340 PF08379 Atu2340 Atu2341 PF13489 Methyltransferase domain Atu2342 PF00583 Acetyltransferase (GNAT) family Atu2343 PF13673 Acetyltransferase (GNAT) domain Atu2344 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu2346 PF02653 Atu2346 Atu2347 PF00005 ABC transporter Atu2348 PF13407 Periplasmic binding protein domain Atu2350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2350 PF03466 LysR substrate binding domain Atu2354 PF12802 MarR family Atu2356 PF04932 Atu2356 Atu2358 PF01757 Atu2358 Atu2360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu2360 PF00672 HAMP domain Atu2361 PF07690 Major Facilitator Superfamily Atu2362 PF02574 Homocysteine S-methyltransferase Atu2363 PF00528 Binding-protein-dependent transport system inner membrane component Atu2364 PF00528 Binding-protein-dependent transport system inner membrane component Atu2365 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu2366 PF00005 ABC transporter Atu2369 PF13527 Acetyltransferase (GNAT) domain Atu2371 PF00331 Glycosyl hydrolase family 10 Atu2372 PF00535 Glycosyl transferase family 2 Atu2373 PF00535 Glycosyl transferase family 2 Atu2375 PF03808 Atu2375 Atu2377 PF02706 Chain length determinant protein Atu2377 PF13807 Atu2377 Atu2379 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Atu2379 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Atu2379 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Atu2379 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Atu2380 PF01152 Bacterial-like globin Atu2381 PF04241 Atu2381 Atu2383 PF10087 Atu2383 Atu2384 PF00440 Bacterial regulatory proteins, tetR family Atu2384 PF08362 YcdC-like protein, C-terminal region Atu2385 PF01546 Peptidase family M20/M25/M40 Atu2385 PF07687 Peptidase dimerisation domain Atu2386 PF01979 Amidohydrolase family Atu2387 PF00293 NUDIX domain Atu2388 PF00005 ABC transporter Atu2389 PF00528 Binding-protein-dependent transport system inner membrane component Atu2390 PF00528 Binding-protein-dependent transport system inner membrane component Atu2391 PF09084 NMT1/THI5 like Atu2392 PF16576 Atu2392 Atu2393 PF00873 AcrB/AcrD/AcrF family Atu2394 PF00027 Cyclic nucleotide-binding domain Atu2394 PF13545 Crp-like helix-turn-helix domain Atu2395 PF00753 Metallo-beta-lactamase superfamily Atu2396 PF02492 CobW/HypB/UreG, nucleotide-binding domain Atu2397 PF01730 UreF Atu2398 PF02814 UreE urease accessory protein, N-terminal domain Atu2398 PF05194 UreE urease accessory protein, C-terminal domain Atu2399 PF08534 Redoxin Atu2400 PF09601 Atu2400 Atu2401 PF00449 Urease alpha-subunit, N-terminal domain Atu2401 PF01979 Amidohydrolase family Atu2403 PF07007 Protein of unknown function (DUF1311) Atu2404 PF04828 Glutathione-dependent formaldehyde-activating enzyme Atu2405 PF00699 Urease beta subunit Atu2406 PF06906 Atu2406 Atu2407 PF00547 Urease, gamma subunit Atu2408 PF01774 UreD urease accessory protein Atu2410 PF00005 ABC transporter Atu2411 PF00005 ABC transporter Atu2411 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu2412 PF02653 Atu2412 Atu2413 PF02653 Atu2413 Atu2414 PF13433 Periplasmic binding protein domain Atu2415 PF10931 Atu2415 Atu2416 PF00120 Glutamine synthetase, catalytic domain Atu2416 PF03951 Glutamine synthetase, beta-Grasp domain Atu2417 PF13561 Enoyl-(Acyl carrier protein) reductase Atu2418 PF00072 Response regulator receiver domain Atu2418 PF00512 His Kinase A (phospho-acceptor) domain Atu2418 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2419 PF00072 Response regulator receiver domain Atu2419 PF00196 Bacterial regulatory proteins, luxR family Atu2420 PF13521 AAA domain Atu2421 PF01522 Polysaccharide deacetylase Atu2422 PF13458 Periplasmic binding protein Atu2424 PF00005 ABC transporter Atu2425 PF00005 ABC transporter Atu2425 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu2426 PF02653 Atu2426 Atu2426 PF11862 Atu2426 Atu2427 PF02653 Atu2427 Atu2428 PF00459 Inositol monophosphatase family Atu2430 PF06627 Protein of unknown function (DUF1153) Atu2431 PF14542 GCN5-related N-acetyl-transferase Atu2432 PF06348 Atu2432 Atu2434 PF00072 Response regulator receiver domain Atu2434 PF00486 Transcriptional regulatory protein, C terminal Atu2435 PF13302 Acetyltransferase (GNAT) domain Atu2436 PF12146 Putative lysophospholipase Atu2437 PF13302 Acetyltransferase (GNAT) domain Atu2438 PF10090 Uncharacterized protein conserved in bacteria (DUF2328) Atu2439 PF06577 Atu2439 Atu2441 PF00588 SpoU rRNA Methylase family Atu2443 PF00849 RNA pseudouridylate synthase Atu2443 PF01479 S4 domain Atu2444 PF13578 Methyltransferase domain Atu2445 PF00140 Sigma-70 factor, region 1 Atu2445 PF04542 Sigma-70 region 2 Atu2445 PF04545 Sigma-70, region 4 Atu2447 PF00709 Adenylosuccinate synthetase Atu2448 PF00892 EamA-like transporter family Atu2449 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP Atu2451 PF01464 Transglycosylase SLT domain Atu2452 PF01738 Dienelactone hydrolase family Atu2453 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu2454 PF04954 Siderophore-interacting protein Atu2454 PF08021 Siderophore-interacting FAD-binding domain Atu2454 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) Atu2455 PF03167 Uracil DNA glycosylase superfamily Atu2456 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu2457 PF04304 Atu2457 Atu2458 PF00005 ABC transporter Atu2459 PF01032 FecCD transport family Atu2460 PF01497 Periplasmic binding protein Atu2461 PF03992 Antibiotic biosynthesis monooxygenase Atu2462 PF06228 Haem utilisation ChuX/HutX Atu2463 PF03724 META domain Atu2463 PF09619 Type III secretion system lipoprotein chaperone (YscW) Atu2464 PF00551 Formyl transferase Atu2465 PF00512 His Kinase A (phospho-acceptor) domain Atu2465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2465 PF08521 Atu2465 Atu2466 PF00072 Response regulator receiver domain Atu2466 PF00486 Transcriptional regulatory protein, C terminal Atu2467 PF13416 Bacterial extracellular solute-binding protein Atu2469 PF03401 Tripartite tricarboxylate transporter family receptor Atu2470 PF07331 Atu2470 Atu2471 PF01970 Atu2471 Atu2473 PF01497 Periplasmic binding protein Atu2474 PF01032 FecCD transport family Atu2475 PF01032 FecCD transport family Atu2476 PF00005 ABC transporter Atu2477 PF00210 Ferritin-like domain Atu2480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2480 PF03466 LysR substrate binding domain Atu2481 PF07859 alpha/beta hydrolase fold Atu2482 PF13533 Biotin-lipoyl like Atu2483 PF00873 AcrB/AcrD/AcrF family Atu2485 PF03372 Endonuclease/Exonuclease/phosphatase family Atu2486 PF13091 PLD-like domain Atu2486 PF13396 Atu2486 Atu2487 PF08543 Phosphomethylpyrimidine kinase Atu2488 PF00484 Carbonic anhydrase Atu2489 PF13406 Transglycosylase SLT domain Atu2490 PF01118 Semialdehyde dehydrogenase, NAD binding domain Atu2490 PF02774 Semialdehyde dehydrogenase, dimerisation domain Atu2492 PF00083 Sugar (and other) transporter Atu2493 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Atu2493 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Atu2493 PF12769 Domain of unknown function (DUF3814) Atu2494 PF02233 NAD(P) transhydrogenase beta subunit Atu2495 PF01613 Flavin reductase like domain Atu2496 PF00881 Nitroreductase family Atu2497 PF00561 alpha/beta hydrolase fold Atu2498 PF01042 Endoribonuclease L-PSP Atu2499 PF00857 Isochorismatase family Atu2500 PF00296 Luciferase-like monooxygenase Atu2502 PF01126 Heme oxygenase Atu2503 PF00701 Dihydrodipicolinate synthetase family Atu2504 PF00392 Bacterial regulatory proteins, gntR family Atu2504 PF07729 FCD domain Atu2505 PF01547 Bacterial extracellular solute-binding protein Atu2506 PF00528 Binding-protein-dependent transport system inner membrane component Atu2507 PF00528 Binding-protein-dependent transport system inner membrane component Atu2508 PF00005 ABC transporter Atu2508 PF08402 TOBE domain Atu2509 PF00294 pfkB family carbohydrate kinase Atu2510 PF03576 Peptidase family S58 Atu2511 PF01063 Aminotransferase class IV Atu2512 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2512 PF03466 LysR substrate binding domain Atu2513 PF00144 Beta-lactamase Atu2514 PF00005 ABC transporter Atu2515 PF00005 ABC transporter Atu2516 PF00528 Binding-protein-dependent transport system inner membrane component Atu2516 PF12911 Atu2516 Atu2517 PF00528 Binding-protein-dependent transport system inner membrane component Atu2518 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu2519 PF01244 Membrane dipeptidase (Peptidase family M19) Atu2521 PF03706 Atu2521 Atu2521 PF09924 Uncharacterized conserved protein (DUF2156) Atu2522 PF06057 Bacterial virulence protein (VirJ) Atu2523 PF16684 Atu2523 Atu2524 PF06748 Protein of unknown function (DUF1217) Atu2525 PF07690 Major Facilitator Superfamily Atu2526 PF03795 YCII-related domain Atu2527 PF00775 Dioxygenase Atu2527 PF04444 Catechol dioxygenase N terminus Atu2528 PF00465 Iron-containing alcohol dehydrogenase Atu2529 PF04909 Amidohydrolase Atu2530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu2530 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Atu2531 PF01613 Flavin reductase like domain Atu2532 PF01047 MarR family Atu2534 PF13505 Outer membrane protein beta-barrel domain Atu2535 PF00512 His Kinase A (phospho-acceptor) domain Atu2535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2536 PF00072 Response regulator receiver domain Atu2536 PF00486 Transcriptional regulatory protein, C terminal Atu2537 PF00440 Bacterial regulatory proteins, tetR family Atu2538 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Atu2538 PF13450 NAD(P)-binding Rossmann-like domain Atu2548 PF01259 SAICAR synthetase Atu2549 PF00440 Bacterial regulatory proteins, tetR family Atu2550 PF13533 Biotin-lipoyl like Atu2551 PF00873 AcrB/AcrD/AcrF family Atu2552 PF02321 Outer membrane efflux protein Atu2553 PF01132 Elongation factor P (EF-P) OB domain Atu2553 PF08207 Elongation factor P (EF-P) KOW-like domain Atu2553 PF09285 Elongation factor P, C-terminal Atu2554 PF00152 tRNA synthetases class II (D, K and N) Atu2555 PF04055 Radical SAM superfamily Atu2555 PF13353 4Fe-4S single cluster domain Atu2558 PF01037 AsnC family Atu2559 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2559 PF03466 LysR substrate binding domain Atu2560 PF01266 FAD dependent oxidoreductase Atu2561 PF13531 Bacterial extracellular solute-binding protein Atu2562 PF00528 Binding-protein-dependent transport system inner membrane component Atu2563 PF00005 ABC transporter Atu2563 PF03459 TOBE domain Atu2564 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2565 PF03576 Peptidase family S58 Atu2566 PF05690 Thiazole biosynthesis protein ThiG Atu2567 PF02597 ThiS family Atu2568 PF01266 FAD dependent oxidoreductase Atu2569 PF01964 ThiC family Atu2569 PF13667 ThiC-associated domain Atu2571 PF00550 Phosphopantetheine attachment site Atu2572 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu2572 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu2574 PF08893 Atu2574 Atu2576 PF12146 Putative lysophospholipase Atu2576 PF12697 Alpha/beta hydrolase family Atu2577 PF00005 ABC transporter Atu2577 PF00664 ABC transporter transmembrane region Atu2578 PF00027 Cyclic nucleotide-binding domain Atu2579 PF12706 Beta-lactamase superfamily domain Atu2580 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu2580 PF00211 Adenylate and Guanylate cyclase catalytic domain Atu2582 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Atu2582 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Atu2582 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Atu2583 PF00534 Glycosyl transferases group 1 Atu2585 PF04488 Glycosyltransferase sugar-binding region containing DXD motif Atu2586 PF00005 ABC transporter Atu2586 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu2587 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu2588 PF00528 Binding-protein-dependent transport system inner membrane component Atu2589 PF00528 Binding-protein-dependent transport system inner membrane component Atu2589 PF12911 Atu2589 Atu2590 PF04101 Glycosyltransferase family 28 C-terminal domain Atu2591 PF00534 Glycosyl transferases group 1 Atu2592 PF04101 Glycosyltransferase family 28 C-terminal domain Atu2593 PF03932 CutC family Atu2594 PF07690 Major Facilitator Superfamily Atu2595 PF07171 MlrC C-terminus Atu2595 PF07364 Protein of unknown function (DUF1485) Atu2596 PF00728 Glycosyl hydrolase family 20, catalytic domain Atu2596 PF02838 Glycosyl hydrolase family 20, domain 2 Atu2597 PF13561 Enoyl-(Acyl carrier protein) reductase Atu2598 PF01380 SIS domain Atu2598 PF01418 Helix-turn-helix domain, rpiR family Atu2600 PF00005 ABC transporter Atu2601 PF13416 Bacterial extracellular solute-binding protein Atu2602 PF00528 Binding-protein-dependent transport system inner membrane component Atu2603 PF00528 Binding-protein-dependent transport system inner membrane component Atu2604 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu2604 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu2606 PF00392 Bacterial regulatory proteins, gntR family Atu2606 PF07702 UTRA domain Atu2607 PF01380 SIS domain Atu2608 PF01979 Amidohydrolase family Atu2609 PF00480 ROK family Atu2610 PF01494 FAD binding domain Atu2611 PF01569 PAP2 superfamily Atu2612 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Atu2612 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal Atu2612 PF13288 DXP reductoisomerase C-terminal domain Atu2613 PF00155 Aminotransferase class I and II Atu2614 PF13488 Atu2614 Atu2615 PF01103 Surface antigen Atu2615 PF07244 Surface antigen variable number repeat Atu2616 PF04357 Atu2616 Atu2617 PF01584 CheW-like domain Atu2618 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu2618 PF08447 PAS fold Atu2619 PF02634 FdhD/NarQ family Atu2621 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Atu2622 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atu2622 PF02874 ATP synthase alpha/beta family, beta-barrel domain Atu2623 PF00231 ATP synthase Atu2624 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atu2624 PF00306 ATP synthase alpha/beta chain, C terminal domain Atu2624 PF02874 ATP synthase alpha/beta family, beta-barrel domain Atu2625 PF00213 ATP synthase delta (OSCP) subunit Atu2627 PF04851 Type III restriction enzyme, res subunit Atu2628 PF00589 Phage integrase family Atu2628 PF02899 Phage integrase, N-terminal SAM-like domain Atu2629 PF01963 Atu2629 Atu2630 PF11066 Atu2630 Atu2631 PF01292 Prokaryotic cytochrome b561 Atu2632 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu2632 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu2633 PF01810 Atu2633 Atu2634 PF01124 MAPEG family Atu2635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atu2635 PF00364 Biotin-requiring enzyme Atu2635 PF02817 e3 binding domain Atu2636 PF00676 Dehydrogenase E1 component Atu2636 PF02779 Transketolase, pyrimidine binding domain Atu2636 PF16078 Atu2636 Atu2636 PF16870 Atu2636 Atu2637 PF00549 CoA-ligase Atu2637 PF02629 CoA binding domain Atu2638 PF00549 CoA-ligase Atu2638 PF08442 ATP-grasp domain Atu2639 PF00056 lactate/malate dehydrogenase, NAD binding domain Atu2639 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Atu2640 PF03969 AFG1-like ATPase Atu2641 PF02974 Protease inhibitor Inh Atu2642 PF13085 2Fe-2S iron-sulfur cluster binding domain Atu2642 PF13534 4Fe-4S dicluster domain Atu2643 PF00890 FAD binding domain Atu2643 PF02910 Fumarate reductase flavoprotein C-term Atu2644 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Atu2645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Atu2647 PF06325 Ribosomal protein L11 methyltransferase (PrmA) Atu2648 PF01878 EVE domain Atu2649 PF03795 YCII-related domain Atu2650 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Atu2650 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Atu2651 PF00814 Glycoprotease family Atu2652 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Atu2652 PF03900 Porphobilinogen deaminase, C-terminal domain Atu2653 PF02602 Uroporphyrinogen-III synthase HemD Atu2655 PF09731 Atu2655 Atu2656 PF07219 Atu2656 Atu2657 PF05099 Tellurite resistance protein TerB Atu2658 PF00117 Glutamine amidotransferase class-I Atu2659 PF05977 Transmembrane secretion effector Atu2660 PF02594 Uncharacterised ACR, YggU family COG1872 Atu2661 PF00719 Inorganic pyrophosphatase Atu2662 PF00583 Acetyltransferase (GNAT) family Atu2663 PF00009 Elongation factor Tu GTP binding domain Atu2663 PF00679 Elongation factor G C-terminus Atu2663 PF03144 Elongation factor Tu domain 2 Atu2664 PF01432 Peptidase family M3 Atu2665 PF12802 MarR family Atu2666 PF07690 Major Facilitator Superfamily Atu2667 PF00764 Arginosuccinate synthase Atu2668 PF00106 short chain dehydrogenase Atu2669 PF01810 Atu2669 Atu2670 PF00005 ABC transporter Atu2671 PF02653 Atu2671 Atu2672 PF04392 ABC transporter substrate binding protein Atu2673 PF04055 Radical SAM superfamily Atu2675 PF06803 Atu2675 Atu2676 PF01329 Pterin 4 alpha carbinolamine dehydratase Atu2677 PF01451 Low molecular weight phosphotyrosine protein phosphatase Atu2678 PF02834 LigT like Phosphoesterase Atu2679 PF13472 GDSL-like Lipase/Acylhydrolase family Atu2680 PF00005 ABC transporter Atu2682 PF01027 Inhibitor of apoptosis-promoting Bax1 Atu2683 PF10984 Atu2683 Atu2684 PF06764 Protein of unknown function (DUF1223) Atu2685 PF00330 Aconitase family (aconitate hydratase) Atu2685 PF00694 Aconitase C-terminal domain Atu2686 PF00005 ABC transporter Atu2687 PF03379 Atu2687 Atu2688 PF01578 Atu2688 Atu2689 PF04995 Atu2689 Atu2690 PF08534 Redoxin Atu2691 PF00990 GGDEF domain Atu2692 PF04279 Atu2692 Atu2693 PF00448 SRP54-type protein, GTPase domain Atu2693 PF02881 SRP54-type protein, helical bundle domain Atu2694 PF00919 Uncharacterized protein family UPF0004 Atu2694 PF04055 Radical SAM superfamily Atu2695 PF01678 Diaminopimelate epimerase Atu2696 PF12706 Beta-lactamase superfamily domain Atu2697 PF00448 SRP54-type protein, GTPase domain Atu2697 PF02881 SRP54-type protein, helical bundle domain Atu2697 PF02978 Signal peptide binding domain Atu2698 PF01817 Chorismate mutase type II Atu2699 PF00886 Ribosomal protein S16 Atu2700 PF01782 RimM N-terminal domain Atu2700 PF05239 PRC-barrel domain Atu2701 PF01746 tRNA (Guanine-1)-methyltransferase Atu2702 PF01925 Atu2702 Atu2703 PF01245 Ribosomal protein L19 Atu2705 PF00005 ABC transporter Atu2705 PF00664 ABC transporter transmembrane region Atu2706 PF13437 HlyD family secretion protein Atu2706 PF13533 Biotin-lipoyl like Atu2708 PF07690 Major Facilitator Superfamily Atu2709 PF00330 Aconitase family (aconitate hydratase) Atu2710 PF01435 Peptidase family M48 Atu2712 PF00005 ABC transporter Atu2713 PF00528 Binding-protein-dependent transport system inner membrane component Atu2714 PF13343 Bacterial extracellular solute-binding protein Atu2716 PF00005 ABC transporter Atu2716 PF16326 Atu2716 Atu2717 PF04263 Thiamin pyrophosphokinase, catalytic domain Atu2718 PF04204 Homoserine O-succinyltransferase Atu2719 PF01263 Aldose 1-epimerase Atu2720 PF00912 Transglycosylase Atu2721 PF00348 Polyprenyl synthetase Atu2722 PF00691 OmpA family Atu2722 PF13488 Atu2722 Atu2723 PF04551 GcpE protein Atu2724 PF07690 Major Facilitator Superfamily Atu2725 PF00455 Atu2725 Atu2725 PF08220 DeoR-like helix-turn-helix domain Atu2726 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Atu2726 PF00364 Biotin-requiring enzyme Atu2726 PF00682 HMGL-like Atu2726 PF02436 Conserved carboxylase domain Atu2726 PF02785 Biotin carboxylase C-terminal domain Atu2726 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu2727 PF00196 Bacterial regulatory proteins, luxR family Atu2727 PF03472 Autoinducer binding domain Atu2728 PF00005 ABC transporter Atu2728 PF00664 ABC transporter transmembrane region Atu2730 PF06165 Glycosyltransferase family 36 Atu2730 PF10091 Putative glucoamylase Atu2730 PF17167 Atu2730 Atu2732 PF01546 Peptidase family M20/M25/M40 Atu2732 PF07687 Peptidase dimerisation domain Atu2734 PF01266 FAD dependent oxidoreductase Atu2735 PF00291 Pyridoxal-phosphate dependent enzyme Atu2736 PF00920 Dehydratase family Atu2737 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atu2737 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Atu2738 PF01370 NAD dependent epimerase/dehydratase family Atu2739 PF01565 FAD binding domain Atu2739 PF02913 FAD linked oxidases, C-terminal domain Atu2740 PF00392 Bacterial regulatory proteins, gntR family Atu2740 PF07729 FCD domain Atu2741 PF01557 Fumarylacetoacetate (FAA) hydrolase family Atu2742 PF04290 Atu2742 Atu2743 PF06808 Atu2743 Atu2744 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu2745 PF00501 AMP-binding enzyme Atu2745 PF13193 AMP-binding enzyme C-terminal domain Atu2745 PF16177 Atu2745 Atu2746 PF06242 Atu2746 Atu2747 PF01168 Alanine racemase, N-terminal domain Atu2748 PF00133 tRNA synthetases class I (I, L, M and V) Atu2748 PF08264 Anticodon-binding domain of tRNA Atu2748 PF13603 Leucyl-tRNA synthetase, Domain 2 Atu2749 PF04390 Lipopolysaccharide-assembly Atu2750 PF06144 DNA polymerase III, delta subunit Atu2751 PF00037 4Fe-4S binding domain Atu2751 PF11953 Domain of unknown function (DUF3470) Atu2752 PF01479 S4 domain Atu2753 PF00271 Helicase conserved C-terminal domain Atu2755 PF01494 FAD binding domain Atu2756 PF13622 Thioesterase-like superfamily Atu2757 PF00543 Nitrogen regulatory protein P-II Atu2758 PF00909 Ammonium Transporter Family Atu2759 PF01580 FtsK/SpoIIIE family Atu2759 PF09397 Ftsk gamma domain Atu2759 PF13491 Atu2759 Atu2760 PF03548 Outer membrane lipoprotein carrier protein LolA Atu2761 PF03372 Endonuclease/Exonuclease/phosphatase family Atu2762 PF00027 Cyclic nucleotide-binding domain Atu2763 PF00072 Response regulator receiver domain Atu2763 PF00486 Transcriptional regulatory protein, C terminal Atu2764 PF03734 L,D-transpeptidase catalytic domain Atu2765 PF02559 CarD-like/TRCF domain Atu2766 PF05088 Atu2766 Atu2767 PF11700 Atu2767 Atu2768 PF05233 Atu2768 Atu2768 PF07879 Atu2768 Atu2769 PF00108 Thiolase, N-terminal domain Atu2769 PF02803 Thiolase, C-terminal domain Atu2770 PF13561 Enoyl-(Acyl carrier protein) reductase Atu2771 PF00210 Ferritin-like domain Atu2772 PF00293 NUDIX domain Atu2773 PF04748 Divergent polysaccharide deacetylase Atu2774 PF03572 Peptidase family S41 Atu2774 PF13180 PDZ domain Atu2775 PF01551 Peptidase family M23 Atu2776 PF02590 Predicted SPOUT methyltransferase Atu2777 PF02410 Oligomerisation domain Atu2778 PF01467 Cytidylyltransferase Atu2779 PF00171 Aldehyde dehydrogenase family Atu2780 PF00696 Amino acid kinase family Atu2780 PF01472 PUA domain Atu2781 PF01018 GTP1/OBG Atu2781 PF01926 50S ribosome-binding GTPase Atu2782 PF13302 Acetyltransferase (GNAT) domain Atu2783 PF13302 Acetyltransferase (GNAT) domain Atu2784 PF01016 Ribosomal L27 protein Atu2785 PF00829 Ribosomal prokaryotic L21 protein Atu2786 PF06262 Possibl zinc metallo-peptidase Atu2787 PF08410 Atu2787 Atu2788 PF03328 HpcH/HpaI aldolase/citrate lyase family Atu2790 PF00694 Aconitase C-terminal domain Atu2791 PF00180 Isocitrate/isopropylmalate dehydrogenase Atu2792 PF00034 Cytochrome c Atu2792 PF03150 Di-haem cytochrome c peroxidase Atu2793 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atu2793 PF07685 CobB/CobQ-like glutamine amidotransferase domain Atu2794 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2795 PF01888 CbiD Atu2796 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2797 PF01890 Cobalamin synthesis G C-terminus Atu2798 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2798 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Atu2799 PF02571 Atu2799 Atu2800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2801 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2802 PF02570 Precorrin-8X methylmutase Atu2803 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Atu2804 PF02514 Atu2804 Atu2805 PF02492 CobW/HypB/UreG, nucleotide-binding domain Atu2805 PF07683 Cobalamin synthesis protein cobW C-terminal domain Atu2806 PF07845 Atu2806 Atu2807 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Atu2807 PF12557 Cob(I)alamin adenosyltransferase N terminal Atu2808 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atu2808 PF07685 CobB/CobQ-like glutamine amidotransferase domain Atu2809 PF03186 Atu2809 Atu2810 PF00155 Aminotransferase class I and II Atu2811 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu2811 PF13378 Enolase C-terminal domain-like Atu2812 PF05336 Domain of unknown function (DUF718) Atu2813 PF08125 Mannitol dehydrogenase C-terminal domain Atu2814 PF00107 Zinc-binding dehydrogenase Atu2814 PF08240 Alcohol dehydrogenase GroES-like domain Atu2815 PF04909 Amidohydrolase Atu2816 PF00248 Aldo/keto reductase family Atu2817 PF13407 Periplasmic binding protein domain Atu2818 PF02653 Atu2818 Atu2819 PF00005 ABC transporter Atu2821 PF00392 Bacterial regulatory proteins, gntR family Atu2821 PF07729 FCD domain Atu2822 PF04295 Atu2822 Atu2822 PF08666 SAF domain Atu2823 PF01808 AICARFT/IMPCHase bienzyme Atu2823 PF02142 MGS-like domain Atu2824 PF07940 Heparinase II/III-like protein Atu2825 PF01029 NusB family Atu2825 PF01189 NOL1/NOP2/sun family Atu2826 PF01435 Peptidase family M48 Atu2827 PF07896 Protein of unknown function (DUF1674) Atu2828 PF02195 ParB-like nuclease domain Atu2829 PF13614 AAA domain Atu2830 PF02527 rRNA small subunit methyltransferase G Atu2831 PF01134 Glucose inhibited division protein A Atu2831 PF13932 GidA associated domain 3 Atu2832 PF01926 50S ribosome-binding GTPase Atu2832 PF10396 GTP-binding protein TrmE N-terminus Atu2832 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE Atu2833 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atu2833 PF07497 Rho termination factor, RNA-binding domain Atu2833 PF07498 Rho termination factor, N-terminal domain Atu2834 PF03653 Atu2834 Atu2835 PF01208 Uroporphyrinogen decarboxylase (URO-D) Atu3009 PF01757 Atu3009 Atu3010 PF08327 Activator of Hsp90 ATPase homolog 1-like protein Atu3011 PF12840 Helix-turn-helix domain Atu3012 PF11876 Atu3012 Atu3013 PF01850 PIN domain Atu3014 PF04014 Antidote-toxin recognition MazE Atu3015 PF13238 AAA domain Atu3016 PF00300 Histidine phosphatase superfamily (branch 1) Atu3017 PF00300 Histidine phosphatase superfamily (branch 1) Atu3018 PF07366 SnoaL-like polyketide cyclase Atu3020 PF00392 Bacterial regulatory proteins, gntR family Atu3020 PF07729 FCD domain Atu3021 PF00005 ABC transporter Atu3022 PF00528 Binding-protein-dependent transport system inner membrane component Atu3023 PF00528 Binding-protein-dependent transport system inner membrane component Atu3024 PF01547 Bacterial extracellular solute-binding protein Atu3025 PF07940 Heparinase II/III-like protein Atu3025 PF16332 Atu3025 Atu3026 PF13561 Enoyl-(Acyl carrier protein) reductase Atu3027 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu3028 PF01261 Xylose isomerase-like TIM barrel Atu3029 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu3029 PF13378 Enolase C-terminal domain-like Atu3034 PF00480 ROK family Atu3035 PF00196 Bacterial regulatory proteins, luxR family Atu3036 PF00528 Binding-protein-dependent transport system inner membrane component Atu3037 PF00528 Binding-protein-dependent transport system inner membrane component Atu3037 PF12911 Atu3037 Atu3038 PF00005 ABC transporter Atu3038 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu3039 PF01968 Hydantoinase/oxoprolinase Atu3039 PF05378 Atu3039 Atu3040 PF06032 Protein of unknown function (DUF917) Atu3041 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu3042 PF06032 Protein of unknown function (DUF917) Atu3043 PF01968 Hydantoinase/oxoprolinase Atu3043 PF05378 Atu3043 Atu3044 PF01112 Asparaginase Atu3045 PF05899 Protein of unknown function (DUF861) Atu3046 PF01266 FAD dependent oxidoreductase Atu3047 PF00528 Binding-protein-dependent transport system inner membrane component Atu3047 PF12911 Atu3047 Atu3048 PF00528 Binding-protein-dependent transport system inner membrane component Atu3049 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu3050 PF01266 FAD dependent oxidoreductase Atu3051 PF00106 short chain dehydrogenase Atu3052 PF01047 MarR family Atu3053 PF00005 ABC transporter Atu3053 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu3054 PF10091 Putative glucoamylase Atu3056 PF13632 Glycosyl transferase family group 2 Atu3059 PF00999 Sodium/hydrogen exchanger family Atu3060 PF00005 ABC transporter Atu3060 PF06472 Atu3060 Atu3061 PF00990 GGDEF domain Atu3062 PF00356 Bacterial regulatory proteins, lacI family Atu3062 PF13377 Periplasmic binding protein-like domain Atu3063 PF13407 Periplasmic binding protein domain Atu3064 PF00005 ABC transporter Atu3065 PF02653 Atu3065 Atu3066 PF02126 Phosphotriesterase family Atu3067 PF07090 Protein of unknown function (DUF1355) Atu3068 PF00294 pfkB family carbohydrate kinase Atu3069 PF03437 BtpA family Atu3070 PF01546 Peptidase family M20/M25/M40 Atu3070 PF07687 Peptidase dimerisation domain Atu3071 PF12852 Cupin Atu3072 PF00132 Bacterial transferase hexapeptide (six repeats) Atu3072 PF00501 AMP-binding enzyme Atu3072 PF00550 Phosphopantetheine attachment site Atu3072 PF13193 AMP-binding enzyme C-terminal domain Atu3073 PF01177 Asp/Glu/Hydantoin racemase Atu3074 PF13561 Enoyl-(Acyl carrier protein) reductase Atu3075 PF00440 Bacterial regulatory proteins, tetR family Atu3076 PF00860 Permease family Atu3077 PF00144 Beta-lactamase Atu3078 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3078 PF03466 LysR substrate binding domain Atu3079 PF02417 Atu3079 Atu3080 PF07394 Atu3080 Atu3081 PF08811 Atu3081 Atu3084 PF04542 Sigma-70 region 2 Atu3084 PF08281 Sigma-70, region 4 Atu3085 PF01177 Asp/Glu/Hydantoin racemase Atu3086 PF00528 Binding-protein-dependent transport system inner membrane component Atu3088 PF13416 Bacterial extracellular solute-binding protein Atu3089 PF00005 ABC transporter Atu3089 PF08402 TOBE domain Atu3090 PF00929 Exonuclease Atu3093 PF01464 Transglycosylase SLT domain Atu3094 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu3094 PF08447 PAS fold Atu3094 PF08448 PAS fold Atu3095 PF06983 3-demethylubiquinone-9 3-methyltransferase Atu3096 PF13416 Bacterial extracellular solute-binding protein Atu3097 PF00528 Binding-protein-dependent transport system inner membrane component Atu3098 PF00528 Binding-protein-dependent transport system inner membrane component Atu3099 PF00005 ABC transporter Atu3099 PF08402 TOBE domain Atu3100 PF00528 Binding-protein-dependent transport system inner membrane component Atu3101 PF00528 Binding-protein-dependent transport system inner membrane component Atu3102 PF01547 Bacterial extracellular solute-binding protein Atu3103 PF00005 ABC transporter Atu3103 PF08402 TOBE domain Atu3104 PF06964 Alpha-L-arabinofuranosidase C-terminus Atu3105 PF12840 Helix-turn-helix domain Atu3106 PF13416 Bacterial extracellular solute-binding protein Atu3107 PF00356 Bacterial regulatory proteins, lacI family Atu3107 PF13377 Periplasmic binding protein-like domain Atu3108 PF10022 Atu3108 Atu3109 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atu3109 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu3110 PF01261 Xylose isomerase-like TIM barrel Atu3111 PF00005 ABC transporter Atu3111 PF08402 TOBE domain Atu3112 PF00528 Binding-protein-dependent transport system inner membrane component Atu3113 PF00528 Binding-protein-dependent transport system inner membrane component Atu3114 PF01547 Bacterial extracellular solute-binding protein Atu3115 PF00440 Bacterial regulatory proteins, tetR family Atu3116 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu3117 PF06187 Protein of unknown function (DUF993) Atu3118 PF01261 Xylose isomerase-like TIM barrel Atu3119 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu3119 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu3121 PF00313 'Cold-shock' DNA-binding domain Atu3123 PF01165 Ribosomal protein S21 Atu3127 PF01757 Atu3127 Atu3128 PF07470 Glycosyl Hydrolase Family 88 Atu3129 PF00295 Glycosyl hydrolases family 28 Atu3130 PF01547 Bacterial extracellular solute-binding protein Atu3131 PF00005 ABC transporter Atu3131 PF08402 TOBE domain Atu3132 PF00528 Binding-protein-dependent transport system inner membrane component Atu3133 PF00528 Binding-protein-dependent transport system inner membrane component Atu3134 PF12833 Helix-turn-helix domain Atu3135 PF06808 Atu3135 Atu3136 PF04290 Atu3136 Atu3137 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu3138 PF04909 Amidohydrolase Atu3139 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu3139 PF13378 Enolase C-terminal domain-like Atu3140 PF00701 Dihydrodipicolinate synthetase family Atu3141 PF13561 Enoyl-(Acyl carrier protein) reductase Atu3142 PF04962 KduI/IolB family Atu3143 PF01370 NAD dependent epimerase/dehydratase family Atu3144 PF00392 Bacterial regulatory proteins, gntR family Atu3144 PF07729 FCD domain Atu3145 PF07883 Cupin domain Atu3146 PF00557 Metallopeptidase family M24 Atu3146 PF01321 Creatinase/Prolidase N-terminal domain Atu3147 PF00248 Aldo/keto reductase family Atu3147 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu3148 PF00005 ABC transporter Atu3148 PF08402 TOBE domain Atu3149 PF00528 Binding-protein-dependent transport system inner membrane component Atu3150 PF00528 Binding-protein-dependent transport system inner membrane component Atu3151 PF01547 Bacterial extracellular solute-binding protein Atu3152 PF07883 Cupin domain Atu3152 PF12833 Helix-turn-helix domain Atu3153 PF02311 AraC-like ligand binding domain Atu3153 PF12833 Helix-turn-helix domain Atu3154 PF07690 Major Facilitator Superfamily Atu3155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3155 PF03466 LysR substrate binding domain Atu3156 PF06808 Atu3156 Atu3157 PF04290 Atu3157 Atu3158 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu3159 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atu3159 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Atu3160 PF03992 Antibiotic biosynthesis monooxygenase Atu3161 PF03447 Homoserine dehydrogenase, NAD binding domain Atu3162 PF00356 Bacterial regulatory proteins, lacI family Atu3162 PF13377 Periplasmic binding protein-like domain Atu3163 PF08240 Alcohol dehydrogenase GroES-like domain Atu3163 PF16912 Atu3163 Atu3164 PF13561 Enoyl-(Acyl carrier protein) reductase Atu3165 PF01547 Bacterial extracellular solute-binding protein Atu3166 PF00294 pfkB family carbohydrate kinase Atu3167 PF08013 Tagatose 6 phosphate kinase Atu3168 PF00528 Binding-protein-dependent transport system inner membrane component Atu3169 PF00528 Binding-protein-dependent transport system inner membrane component Atu3170 PF00005 ABC transporter Atu3170 PF08402 TOBE domain Atu3171 PF00005 ABC transporter Atu3171 PF08402 TOBE domain Atu3172 PF00528 Binding-protein-dependent transport system inner membrane component Atu3173 PF00528 Binding-protein-dependent transport system inner membrane component Atu3174 PF01547 Bacterial extracellular solute-binding protein Atu3175 PF01053 Cys/Met metabolism PLP-dependent enzyme Atu3176 PF00392 Bacterial regulatory proteins, gntR family Atu3176 PF07729 FCD domain Atu3177 PF00075 RNase H Atu3178 PF01297 Periplasmic solute binding protein family Atu3179 PF00950 Atu3179 Atu3180 PF00005 ABC transporter Atu3181 PF02492 CobW/HypB/UreG, nucleotide-binding domain Atu3181 PF07683 Cobalamin synthesis protein cobW C-terminal domain Atu3182 PF09335 Atu3182 Atu3184 PF02492 CobW/HypB/UreG, nucleotide-binding domain Atu3184 PF07683 Cobalamin synthesis protein cobW C-terminal domain Atu3185 PF13416 Bacterial extracellular solute-binding protein Atu3186 PF00528 Binding-protein-dependent transport system inner membrane component Atu3187 PF00528 Binding-protein-dependent transport system inner membrane component Atu3188 PF00005 ABC transporter Atu3188 PF08402 TOBE domain Atu3189 PF13489 Methyltransferase domain Atu3191 PF03922 OmpW family Atu3192 PF07690 Major Facilitator Superfamily Atu3193 PF12802 MarR family Atu3194 PF00583 Acetyltransferase (GNAT) family Atu3196 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Atu3196 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Atu3197 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3197 PF03466 LysR substrate binding domain Atu3198 PF13407 Periplasmic binding protein domain Atu3199 PF02653 Atu3199 Atu3200 PF00005 ABC transporter Atu3201 PF00440 Bacterial regulatory proteins, tetR family Atu3201 PF08361 MAATS-type transcriptional repressor, C-terminal region Atu3202 PF00873 AcrB/AcrD/AcrF family Atu3203 PF00529 HlyD family secretion protein Atu3203 PF16576 Atu3203 Atu3204 PF00990 GGDEF domain Atu3204 PF08448 PAS fold Atu3204 PF13188 PAS domain Atu3205 PF05899 Protein of unknown function (DUF861) Atu3205 PF07883 Cupin domain Atu3207 PF00563 EAL domain Atu3207 PF00990 GGDEF domain Atu3208 PF02615 Malate/L-lactate dehydrogenase Atu3210 PF01580 FtsK/SpoIIIE family Atu3210 PF09397 Ftsk gamma domain Atu3212 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu3212 PF10518 TAT (twin-arginine translocation) pathway signal sequence Atu3213 PF00528 Binding-protein-dependent transport system inner membrane component Atu3214 PF00528 Binding-protein-dependent transport system inner membrane component Atu3215 PF00005 ABC transporter Atu3216 PF00005 ABC transporter Atu3217 PF00266 Aminotransferase class-V Atu3219 PF00920 Dehydratase family Atu3222 PF13407 Periplasmic binding protein domain Atu3223 PF00005 ABC transporter Atu3224 PF02653 Atu3224 Atu3225 PF02653 Atu3225 Atu3226 PF00392 Bacterial regulatory proteins, gntR family Atu3226 PF07729 FCD domain Atu3227 PF12833 Helix-turn-helix domain Atu3227 PF12852 Cupin Atu3228 PF01336 OB-fold nucleic acid binding domain Atu3228 PF02811 PHP domain Atu3228 PF07733 Bacterial DNA polymerase III alpha subunit Atu3228 PF14579 Helix-hairpin-helix motif Atu3229 PF00817 impB/mucB/samB family Atu3232 PF05161 MOFRL family Atu3232 PF13660 Domain of unknown function (DUF4147) Atu3234 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu3234 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu3235 PF01261 Xylose isomerase-like TIM barrel Atu3235 PF07582 AP endonuclease family 2 C terminus Atu3236 PF00005 ABC transporter Atu3236 PF08402 TOBE domain Atu3237 PF00528 Binding-protein-dependent transport system inner membrane component Atu3238 PF00528 Binding-protein-dependent transport system inner membrane component Atu3239 PF13416 Bacterial extracellular solute-binding protein Atu3240 PF00480 ROK family Atu3240 PF13412 Winged helix-turn-helix DNA-binding Atu3241 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu3242 PF06283 Trehalose utilisation Atu3243 PF01425 Amidase Atu3244 PF00563 EAL domain Atu3244 PF00672 HAMP domain Atu3244 PF00990 GGDEF domain Atu3245 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu3246 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu3247 PF03776 Septum formation topological specificity factor MinE Atu3248 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atu3249 PF03775 Septum formation inhibitor MinC, C-terminal domain Atu3249 PF05209 Septum formation inhibitor MinC, N-terminal domain Atu3251 PF13419 Haloacid dehalogenase-like hydrolase Atu3252 PF00392 Bacterial regulatory proteins, gntR family Atu3252 PF07729 FCD domain Atu3253 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu3254 PF04290 Atu3254 Atu3255 PF06808 Atu3255 Atu3256 PF00107 Zinc-binding dehydrogenase Atu3256 PF08240 Alcohol dehydrogenase GroES-like domain Atu3257 PF03786 D-mannonate dehydratase (UxuA) Atu3259 PF00171 Aldehyde dehydrogenase family Atu3260 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu3261 PF04290 Atu3261 Atu3261 PF06808 Atu3261 Atu3262 PF00005 ABC transporter Atu3262 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu3263 PF03841 L-seryl-tRNA selenium transferase Atu3264 PF01614 Bacterial transcriptional regulator Atu3264 PF09339 IclR helix-turn-helix domain Atu3265 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease Atu3266 PF01979 Amidohydrolase family Atu3267 PF00528 Binding-protein-dependent transport system inner membrane component Atu3267 PF12911 Atu3267 Atu3268 PF00528 Binding-protein-dependent transport system inner membrane component Atu3269 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu3271 PF00534 Glycosyl transferases group 1 Atu3271 PF13439 Glycosyltransferase Family 4 Atu3272 PF02563 Polysaccharide biosynthesis/export protein Atu3273 PF16576 Atu3273 Atu3274 PF00873 AcrB/AcrD/AcrF family Atu3275 PF06776 Invasion associated locus B (IalB) protein Atu3276 PF03797 Autotransporter beta-domain Atu3276 PF12951 Atu3276 Atu3277 PF01613 Flavin reductase like domain Atu3278 PF00248 Aldo/keto reductase family Atu3279 PF00296 Luciferase-like monooxygenase Atu3280 PF00392 Bacterial regulatory proteins, gntR family Atu3280 PF07702 UTRA domain Atu3281 PF00005 ABC transporter Atu3281 PF03459 TOBE domain Atu3282 PF01547 Bacterial extracellular solute-binding protein Atu3283 PF00528 Binding-protein-dependent transport system inner membrane component Atu3284 PF00528 Binding-protein-dependent transport system inner membrane component Atu3285 PF01055 Glycosyl hydrolases family 31 Atu3286 PF00528 Binding-protein-dependent transport system inner membrane component Atu3287 PF09084 NMT1/THI5 like Atu3288 PF02110 Hydroxyethylthiazole kinase family Atu3289 PF02581 Thiamine monophosphate synthase/TENI Atu3290 PF08543 Phosphomethylpyrimidine kinase Atu3291 PF01037 AsnC family Atu3291 PF13412 Winged helix-turn-helix DNA-binding Atu3292 PF00842 Alanine racemase, C-terminal domain Atu3292 PF01168 Alanine racemase, N-terminal domain Atu3293 PF01266 FAD dependent oxidoreductase Atu3294 PF00392 Bacterial regulatory proteins, gntR family Atu3294 PF07729 FCD domain Atu3295 PF07886 Atu3295 Atu3296 PF00072 Response regulator receiver domain Atu3296 PF00158 Sigma-54 interaction domain Atu3296 PF02954 Bacterial regulatory protein, Fis family Atu3297 PF00512 His Kinase A (phospho-acceptor) domain Atu3297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu3298 PF00375 Sodium:dicarboxylate symporter family Atu3299 PF00892 EamA-like transporter family Atu3300 PF00202 Aminotransferase class-III Atu3301 PF13561 Enoyl-(Acyl carrier protein) reductase Atu3302 PF13432 Tetratricopeptide repeat Atu3302 PF13480 Acetyltransferase (GNAT) domain Atu3303 PF01546 Peptidase family M20/M25/M40 Atu3303 PF07687 Peptidase dimerisation domain Atu3307 PF01270 Glycosyl hydrolases family 8 Atu3308 PF03170 Bacterial cellulose synthase subunit Atu3309 PF00535 Glycosyl transferase family 2 Atu3309 PF03552 Cellulose synthase Atu3309 PF07238 PilZ domain Atu3311 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Atu3312 PF02156 Glycosyl hydrolase family 26 Atu3313 PF06191 Atu3313 Atu3314 PF13506 Glycosyl transferase family 21 Atu3315 PF01370 NAD dependent epimerase/dehydratase family Atu3316 PF01370 NAD dependent epimerase/dehydratase family Atu3318 PF00196 Bacterial regulatory proteins, luxR family Atu3322 PF00005 ABC transporter Atu3322 PF00664 ABC transporter transmembrane region Atu3323 PF13437 HlyD family secretion protein Atu3326 PF02563 Polysaccharide biosynthesis/export protein Atu3327 PF02397 Atu3327 Atu3328 PF07883 Cupin domain Atu3328 PF13560 Helix-turn-helix domain Atu3329 PF00202 Aminotransferase class-III Atu3330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu3331 PF03734 L,D-transpeptidase catalytic domain Atu3333 PF13561 Enoyl-(Acyl carrier protein) reductase Atu3335 PF02245 Methylpurine-DNA glycosylase (MPG) Atu3337 PF00356 Bacterial regulatory proteins, lacI family Atu3337 PF13377 Periplasmic binding protein-like domain Atu3338 PF01547 Bacterial extracellular solute-binding protein Atu3339 PF00528 Binding-protein-dependent transport system inner membrane component Atu3340 PF00528 Binding-protein-dependent transport system inner membrane component Atu3341 PF00005 ABC transporter Atu3341 PF08402 TOBE domain Atu3342 PF06283 Trehalose utilisation Atu3343 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu3343 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu3344 PF04055 Radical SAM superfamily Atu3344 PF13394 4Fe-4S single cluster domain Atu3345 PF01242 6-pyruvoyl tetrahydropterin synthase Atu3346 PF06508 Queuosine biosynthesis protein QueC Atu3347 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu3348 PF01261 Xylose isomerase-like TIM barrel Atu3349 PF00005 ABC transporter Atu3349 PF08402 TOBE domain Atu3350 PF00528 Binding-protein-dependent transport system inner membrane component Atu3351 PF00528 Binding-protein-dependent transport system inner membrane component Atu3352 PF01547 Bacterial extracellular solute-binding protein Atu3353 PF00483 Nucleotidyl transferase Atu3353 PF01050 Mannose-6-phosphate isomerase Atu3354 PF01011 PQQ enzyme repeat Atu3355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3355 PF03466 LysR substrate binding domain Atu3356 PF00390 Malic enzyme, N-terminal domain Atu3356 PF01515 Phosphate acetyl/butaryl transferase Atu3356 PF03949 Malic enzyme, NAD binding domain Atu3357 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu3358 PF00528 Binding-protein-dependent transport system inner membrane component Atu3359 PF00528 Binding-protein-dependent transport system inner membrane component Atu3360 PF00005 ABC transporter Atu3361 PF03972 MmgE/PrpD family Atu3362 PF00296 Luciferase-like monooxygenase Atu3363 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu3363 PF08447 PAS fold Atu3363 PF13426 PAS domain Atu3364 PF01266 FAD dependent oxidoreductase Atu3366 PF04290 Atu3366 Atu3367 PF06808 Atu3367 Atu3368 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu3369 PF07722 Peptidase C26 Atu3370 PF02653 Atu3370 Atu3371 PF00005 ABC transporter Atu3372 PF13407 Periplasmic binding protein domain Atu3374 PF01546 Peptidase family M20/M25/M40 Atu3375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu3376 PF13354 Beta-lactamase enzyme family Atu3377 PF00005 ABC transporter Atu3377 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu3378 PF00528 Binding-protein-dependent transport system inner membrane component Atu3379 PF00528 Binding-protein-dependent transport system inner membrane component Atu3381 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3381 PF03466 LysR substrate binding domain Atu3382 PF13437 HlyD family secretion protein Atu3382 PF13533 Biotin-lipoyl like Atu3383 PF00005 ABC transporter Atu3383 PF00664 ABC transporter transmembrane region Atu3385 PF00593 TonB dependent receptor Atu3385 PF07715 TonB-dependent Receptor Plug Domain Atu3386 PF04773 FecR protein Atu3386 PF16220 Atu3386 Atu3387 PF04542 Sigma-70 region 2 Atu3387 PF08281 Sigma-70, region 4 Atu3388 PF00005 ABC transporter Atu3389 PF01032 FecCD transport family Atu3390 PF01497 Periplasmic binding protein Atu3391 PF01497 Periplasmic binding protein Atu3392 PF08241 Methyltransferase domain Atu3393 PF00127 Copper binding proteins, plastocyanin/azurin family Atu3394 PF00005 ABC transporter Atu3395 PF01032 FecCD transport family Atu3396 PF01497 Periplasmic binding protein Atu3397 PF00583 Acetyltransferase (GNAT) family Atu3398 PF01546 Peptidase family M20/M25/M40 Atu3398 PF07687 Peptidase dimerisation domain Atu3399 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu3400 PF05899 Protein of unknown function (DUF861) Atu3401 PF00171 Aldehyde dehydrogenase family Atu3402 PF00180 Isocitrate/isopropylmalate dehydrogenase Atu3403 PF00171 Aldehyde dehydrogenase family Atu3404 PF01266 FAD dependent oxidoreductase Atu3405 PF13419 Haloacid dehalogenase-like hydrolase Atu3406 PF00583 Acetyltransferase (GNAT) family Atu3407 PF00202 Aminotransferase class-III Atu3408 PF13419 Haloacid dehalogenase-like hydrolase Atu3409 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu3410 PF00528 Binding-protein-dependent transport system inner membrane component Atu3411 PF00528 Binding-protein-dependent transport system inner membrane component Atu3412 PF00005 ABC transporter Atu3412 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu3413 PF01037 AsnC family Atu3413 PF13412 Winged helix-turn-helix DNA-binding Atu3414 PF01266 FAD dependent oxidoreductase Atu3415 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu3416 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu3417 PF00005 ABC transporter Atu3417 PF00528 Binding-protein-dependent transport system inner membrane component Atu3418 PF00583 Acetyltransferase (GNAT) family Atu3419 PF01546 Peptidase family M20/M25/M40 Atu3419 PF07687 Peptidase dimerisation domain Atu3420 PF00296 Luciferase-like monooxygenase Atu3421 PF00296 Luciferase-like monooxygenase Atu3423 PF02082 Transcriptional regulator Atu3424 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu3425 PF01613 Flavin reductase like domain Atu3426 PF00296 Luciferase-like monooxygenase Atu3428 PF06821 Serine hydrolase Atu3430 PF00296 Luciferase-like monooxygenase Atu3431 PF02770 Acyl-CoA dehydrogenase, middle domain Atu3431 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu3431 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Atu3432 PF09084 NMT1/THI5 like Atu3433 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu3434 PF00528 Binding-protein-dependent transport system inner membrane component Atu3435 PF00528 Binding-protein-dependent transport system inner membrane component Atu3435 PF12911 Atu3435 Atu3436 PF00005 ABC transporter Atu3436 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu3437 PF00005 ABC transporter Atu3437 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu3438 PF00248 Aldo/keto reductase family Atu3439 PF02770 Acyl-CoA dehydrogenase, middle domain Atu3439 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Atu3440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3440 PF03466 LysR substrate binding domain Atu3441 PF00296 Luciferase-like monooxygenase Atu3442 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu3444 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu3445 PF01546 Peptidase family M20/M25/M40 Atu3445 PF07687 Peptidase dimerisation domain Atu3446 PF00296 Luciferase-like monooxygenase Atu3447 PF05368 NmrA-like family Atu3448 PF09084 NMT1/THI5 like Atu3450 PF00296 Luciferase-like monooxygenase Atu3451 PF00296 Luciferase-like monooxygenase Atu3453 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu3453 PF13378 Enolase C-terminal domain-like Atu3454 PF13472 GDSL-like Lipase/Acylhydrolase family Atu3455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu3456 PF00005 ABC transporter Atu3457 PF00005 ABC transporter Atu3458 PF00528 Binding-protein-dependent transport system inner membrane component Atu3458 PF12911 Atu3458 Atu3459 PF00528 Binding-protein-dependent transport system inner membrane component Atu3460 PF01810 Atu3460 Atu3461 PF00392 Bacterial regulatory proteins, gntR family Atu3461 PF07729 FCD domain Atu3462 PF01965 DJ-1/PfpI family Atu3462 PF12833 Helix-turn-helix domain Atu3463 PF00561 alpha/beta hydrolase fold Atu3464 PF00106 short chain dehydrogenase Atu3465 PF00753 Metallo-beta-lactamase superfamily Atu3465 PF04273 Putative phosphatase (DUF442) Atu3466 PF12840 Helix-turn-helix domain Atu3467 PF04143 Atu3467 Atu3469 PF01676 Metalloenzyme superfamily Atu3469 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Atu3471 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atu3471 PF00364 Biotin-requiring enzyme Atu3471 PF02817 e3 binding domain Atu3472 PF02779 Transketolase, pyrimidine binding domain Atu3472 PF02780 Transketolase, C-terminal domain Atu3473 PF00676 Dehydrogenase E1 component Atu3473 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal Atu3474 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu3474 PF02770 Acyl-CoA dehydrogenase, middle domain Atu3474 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu3475 PF00108 Thiolase, N-terminal domain Atu3475 PF02803 Thiolase, C-terminal domain Atu3476 PF01037 AsnC family Atu3476 PF13412 Winged helix-turn-helix DNA-binding Atu3477 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu3477 PF02770 Acyl-CoA dehydrogenase, middle domain Atu3477 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu3478 PF01039 Carboxyl transferase domain Atu3479 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Atu3479 PF00364 Biotin-requiring enzyme Atu3479 PF02785 Biotin carboxylase C-terminal domain Atu3479 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu3480 PF00682 HMGL-like Atu3481 PF00378 Enoyl-CoA hydratase/isomerase family Atu3482 PF02569 Pantoate-beta-alanine ligase Atu3483 PF02548 Ketopantoate hydroxymethyltransferase Atu3485 PF00596 Class II Aldolase and Adducin N-terminal domain Atu3485 PF13561 Enoyl-(Acyl carrier protein) reductase Atu3486 PF00455 Atu3486 Atu3486 PF08220 DeoR-like helix-turn-helix domain Atu3487 PF13407 Periplasmic binding protein domain Atu3488 PF00005 ABC transporter Atu3489 PF02653 Atu3489 Atu3490 PF02653 Atu3490 Atu3491 PF05336 Domain of unknown function (DUF718) Atu3492 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Atu3493 PF00561 alpha/beta hydrolase fold Atu3494 PF05050 Methyltransferase FkbM domain Atu3495 PF00563 EAL domain Atu3495 PF00990 GGDEF domain Atu3498 PF00171 Aldehyde dehydrogenase family Atu3500 PF08713 DNA alkylation repair enzyme Atu3501 PF00005 ABC transporter Atu3502 PF00528 Binding-protein-dependent transport system inner membrane component Atu3503 PF00528 Binding-protein-dependent transport system inner membrane component Atu3504 PF13531 Bacterial extracellular solute-binding protein Atu3505 PF16113 Atu3505 Atu3506 PF11154 Atu3506 Atu3507 PF08239 Bacterial SH3 domain Atu3508 PF08241 Methyltransferase domain Atu3509 PF06676 Atu3509 Atu3510 PF00795 Carbon-nitrogen hydrolase Atu3511 PF00462 Glutaredoxin Atu3512 PF00156 Phosphoribosyl transferase domain Atu3513 PF08241 Methyltransferase domain Atu3514 PF04964 Atu3514 Atu3516 PF14815 NUDIX domain Atu3517 PF00583 Acetyltransferase (GNAT) family Atu3518 PF01960 ArgJ family Atu3519 PF13616 PPIC-type PPIASE domain Atu3520 PF01043 SecA preprotein cross-linking domain Atu3520 PF02810 SEC-C motif Atu3520 PF07516 SecA Wing and Scaffold domain Atu3520 PF07517 SecA DEAD-like domain Atu3521 PF00892 EamA-like transporter family Atu3522 PF01757 Atu3522 Atu3523 PF01943 Atu3523 Atu3523 PF14667 Polysaccharide biosynthesis C-terminal domain Atu3527 PF04909 Amidohydrolase Atu3528 PF00248 Aldo/keto reductase family Atu3529 PF03786 D-mannonate dehydratase (UxuA) Atu3530 PF01232 Mannitol dehydrogenase Rossmann domain Atu3530 PF08125 Mannitol dehydrogenase C-terminal domain Atu3531 PF13561 Enoyl-(Acyl carrier protein) reductase Atu3532 PF00392 Bacterial regulatory proteins, gntR family Atu3532 PF07729 FCD domain Atu3533 PF13407 Periplasmic binding protein domain Atu3534 PF02653 Atu3534 Atu3535 PF02653 Atu3535 Atu3536 PF00005 ABC transporter Atu3538 PF02600 Disulfide bond formation protein DsbB Atu3539 PF14279 Atu3539 Atu3541 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP Atu3542 PF00149 Calcineurin-like phosphoesterase Atu3543 PF02733 Dak1 domain Atu3543 PF02734 DAK2 domain Atu3544 PF02040 Atu3544 Atu3547 PF09929 Atu3547 Atu3548 PF13439 Glycosyltransferase Family 4 Atu3548 PF13692 Glycosyl transferases group 1 Atu3549 PF04230 Atu3549 Atu3550 PF13440 Atu3550 Atu3551 PF00534 Glycosyl transferases group 1 Atu3551 PF13439 Glycosyltransferase Family 4 Atu3556 PF02706 Chain length determinant protein Atu3556 PF13614 AAA domain Atu3556 PF13807 Atu3556 Atu3557 PF04932 Atu3557 Atu3558 PF13579 Glycosyl transferase 4-like domain Atu3558 PF13692 Glycosyl transferases group 1 Atu3559 PF00534 Glycosyl transferases group 1 Atu3559 PF13439 Glycosyltransferase Family 4 Atu3560 PF00534 Glycosyl transferases group 1 Atu3560 PF13439 Glycosyltransferase Family 4 Atu3563 PF01272 Transcription elongation factor, GreA/GreB, C-term Atu3564 PF00722 Glycosyl hydrolases family 16 Atu3565 PF01261 Xylose isomerase-like TIM barrel Atu3568 PF03704 Bacterial transcriptional activator domain Atu3570 PF02624 YcaO-like family Atu3571 PF07812 Atu3571 Atu3572 PF01381 Helix-turn-helix Atu3574 PF00005 ABC transporter Atu3575 PF02653 Atu3575 Atu3576 PF13407 Periplasmic binding protein domain Atu3577 PF00480 ROK family Atu3578 PF01266 FAD dependent oxidoreductase Atu3578 PF16901 Atu3578 Atu3579 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu3580 PF01642 Methylmalonyl-CoA mutase Atu3580 PF02310 B12 binding domain Atu3581 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Atu3581 PF00364 Biotin-requiring enzyme Atu3581 PF02785 Biotin carboxylase C-terminal domain Atu3581 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu3583 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family Atu3585 PF02798 Glutathione S-transferase, N-terminal domain Atu3585 PF13410 Glutathione S-transferase, C-terminal domain Atu3586 PF01039 Carboxyl transferase domain Atu3587 PF06114 Domain of unknown function (DUF955) Atu3587 PF09856 Atu3587 Atu3587 PF13560 Helix-turn-helix domain Atu3588 PF00730 HhH-GPD superfamily base excision DNA repair protein Atu3589 PF00749 tRNA synthetases class I (E and Q), catalytic domain Atu3590 PF03631 Atu3590 Atu3591 PF00106 short chain dehydrogenase Atu3593 PF01923 Cobalamin adenosyltransferase Atu3594 PF01694 Rhomboid family Atu3595 PF01012 Electron transfer flavoprotein domain Atu3596 PF00766 Electron transfer flavoprotein FAD-binding domain Atu3596 PF01012 Electron transfer flavoprotein domain Atu3597 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Atu3597 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Atu3598 PF08534 Redoxin Atu3599 PF00206 Lyase Atu3599 PF14698 Argininosuccinate lyase C-terminal Atu3601 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Atu3601 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Atu3602 PF13779 Atu3602 Atu3603 PF00072 Response regulator receiver domain Atu3604 PF00156 Phosphoribosyl transferase domain Atu3606 PF00005 ABC transporter Atu3608 PF02698 DUF218 domain Atu3609 PF01553 Acyltransferase Atu3610 PF04752 Atu3610 Atu3611 PF02153 Prephenate dehydrogenase Atu3612 PF00155 Aminotransferase class I and II Atu3613 PF08241 Methyltransferase domain Atu3614 PF00753 Metallo-beta-lactamase superfamily Atu3614 PF16123 Atu3614 Atu3615 PF06172 Cupin superfamily (DUF985) Atu3616 PF11306 Protein of unknown function (DUF3108) Atu3617 PF00830 Ribosomal L28 family Atu3618 PF02592 Atu3618 Atu3619 PF13599 Pentapeptide repeats (9 copies) Atu3620 PF13449 Esterase-like activity of phytase Atu3621 PF06213 Atu3621 Atu3621 PF11775 Atu3621 Atu3622 PF07728 AAA domain (dynein-related subfamily) Atu3622 PF12556 Atu3622 Atu3623 PF00226 DnaJ domain Atu3624 PF01722 BolA-like protein Atu3625 PF01761 3-dehydroquinate synthase Atu3626 PF01202 Shikimate kinase Atu3629 PF00589 Phage integrase family Atu3629 PF02899 Phage integrase, N-terminal SAM-like domain Atu3630 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Atu3632 PF01206 Sulfurtransferase TusA Atu3633 PF02492 CobW/HypB/UreG, nucleotide-binding domain Atu3633 PF07683 Cobalamin synthesis protein cobW C-terminal domain Atu3634 PF00768 D-alanyl-D-alanine carboxypeptidase Atu3635 PF01546 Peptidase family M20/M25/M40 Atu3635 PF07687 Peptidase dimerisation domain Atu3637 PF01165 Ribosomal protein S21 Atu3639 PF08887 Atu3639 Atu3639 PF08906 Atu3639 Atu3640 PF13665 Atu3640 Atu3640 PF15604 Atu3640 Atu3641 PF09937 Atu3641 Atu3642 PF05954 Phage late control gene D protein (GPD) Atu3648 PF06042 Bacterial protein of unknown function (DUF925) Atu3650 PF13302 Acetyltransferase (GNAT) domain Atu3651 PF01738 Dienelactone hydrolase family Atu3652 PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal Atu3655 PF08534 Redoxin Atu3656 PF13673 Acetyltransferase (GNAT) domain Atu3657 PF07883 Cupin domain Atu3658 PF13411 MerR HTH family regulatory protein Atu3663 PF02082 Transcriptional regulator Atu3664 PF00561 alpha/beta hydrolase fold Atu3665 PF13561 Enoyl-(Acyl carrier protein) reductase Atu3666 PF02082 Transcriptional regulator Atu3667 PF02261 Aspartate decarboxylase Atu3668 PF02082 Transcriptional regulator Atu3669 PF01554 MatE Atu3670 PF00501 AMP-binding enzyme Atu3670 PF00550 Phosphopantetheine attachment site Atu3670 PF00668 Condensation domain Atu3670 PF13193 AMP-binding enzyme C-terminal domain Atu3671 PF00296 Luciferase-like monooxygenase Atu3672 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu3672 PF00550 Phosphopantetheine attachment site Atu3672 PF00698 Acyl transferase domain Atu3672 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu3672 PF08659 KR domain Atu3672 PF16197 Atu3672 Atu3673 PF00501 AMP-binding enzyme Atu3673 PF00550 Phosphopantetheine attachment site Atu3675 PF00501 AMP-binding enzyme Atu3675 PF00550 Phosphopantetheine attachment site Atu3675 PF00668 Condensation domain Atu3675 PF07993 Male sterility protein Atu3675 PF13193 AMP-binding enzyme C-terminal domain Atu3676 PF13649 Methyltransferase domain Atu3677 PF00202 Aminotransferase class-III Atu3678 PF03621 MbtH-like protein Atu3681 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu3681 PF00550 Phosphopantetheine attachment site Atu3681 PF00698 Acyl transferase domain Atu3681 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu3681 PF08659 KR domain Atu3681 PF16197 Atu3681 Atu3682 PF00501 AMP-binding enzyme Atu3682 PF00550 Phosphopantetheine attachment site Atu3682 PF00668 Condensation domain Atu3682 PF00881 Nitroreductase family Atu3683 PF00501 AMP-binding enzyme Atu3683 PF00550 Phosphopantetheine attachment site Atu3683 PF00668 Condensation domain Atu3683 PF13193 AMP-binding enzyme C-terminal domain Atu3684 PF00550 Phosphopantetheine attachment site Atu3684 PF00668 Condensation domain Atu3685 PF00975 Thioesterase domain Atu3686 PF06276 Ferric iron reductase FhuF-like transporter Atu3686 PF11575 Atu3686 Atu3687 PF00593 TonB dependent receptor Atu3687 PF07660 Secretin and TonB N terminus short domain Atu3687 PF07715 TonB-dependent Receptor Plug Domain Atu3688 PF01497 Periplasmic binding protein Atu3689 PF01032 FecCD transport family Atu3690 PF01032 FecCD transport family Atu3691 PF00005 ABC transporter Atu3692 PF08281 Sigma-70, region 4 Atu3693 PF04773 FecR protein Atu3693 PF16220 Atu3693 Atu3693 PF16344 Atu3693 Atu3694 PF00905 Penicillin binding protein transpeptidase domain Atu3694 PF00912 Transglycosylase Atu3694 PF06832 Atu3694 Atu3695 PF00024 PAN domain Atu3695 PF00207 Alpha-2-macroglobulin family Atu3695 PF01835 MG2 domain Atu3695 PF07703 Alpha-2-macroglobulin family N-terminal region Atu3695 PF10569 Alpha-macro-globulin thiol-ester bond-forming region Atu3695 PF11974 Alpha-2-macroglobulin MG1 domain Atu3696 PF03966 Trm112p-like protein Atu3697 PF02190 ATP-dependent protease La (LON) domain Atu3698 PF00085 Thioredoxin Atu3698 PF14559 Tetratricopeptide repeat Atu3698 PF14561 Tetratricopeptide repeat Atu3699 PF04073 Aminoacyl-tRNA editing domain Atu3701 PF02798 Glutathione S-transferase, N-terminal domain Atu3701 PF13410 Glutathione S-transferase, C-terminal domain Atu3703 PF03054 tRNA methyl transferase Atu3704 PF10129 Atu3704 Atu3705 PF04280 Tim44-like domain Atu3706 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atu3706 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu3707 PF00266 Aminotransferase class-V Atu3708 PF13505 Outer membrane protein beta-barrel domain Atu3709 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Atu3709 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Atu3709 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Atu3709 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Atu3710 PF00004 ATPase family associated with various cellular activities (AAA) Atu3710 PF01434 Peptidase family M41 Atu3710 PF06480 FtsH Extracellular Atu3711 PF01171 PP-loop family Atu3712 PF13525 Outer membrane lipoprotein Atu3713 PF00691 OmpA family Atu3714 PF04052 TolB amino-terminal domain Atu3714 PF07676 WD40-like Beta Propeller Repeat Atu3716 PF02472 Biopolymer transport protein ExbD/TolR Atu3717 PF01618 Atu3717 Atu3718 PF03061 Thioesterase superfamily Atu3719 PF00293 NUDIX domain Atu3720 PF05163 DinB family Atu3721 PF11160 Atu3721 Atu3722 PF05491 Holliday junction DNA helicase ruvB C-terminus Atu3722 PF05496 Holliday junction DNA helicase ruvB N-terminus Atu3723 PF01330 RuvA N terminal domain Atu3723 PF07499 RuvA, C-terminal domain Atu3723 PF14520 Helix-hairpin-helix domain Atu3724 PF02075 Crossover junction endodeoxyribonuclease RuvC Atu3725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu3725 PF00672 HAMP domain Atu3726 PF00296 Luciferase-like monooxygenase Atu3727 PF01709 Transcriptional regulator Atu3728 PF16242 Atu3728 Atu3729 PF13483 Beta-lactamase superfamily domain Atu3730 PF13277 YmdB-like protein Atu3731 PF01812 5-formyltetrahydrofolate cyclo-ligase family Atu3732 PF00571 CBS domain Atu3732 PF01595 Atu3732 Atu3732 PF03471 Transporter associated domain Atu3736 PF00456 Transketolase, thiamine diphosphate binding domain Atu3736 PF02779 Transketolase, pyrimidine binding domain Atu3736 PF02780 Transketolase, C-terminal domain Atu3737 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Atu3737 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Atu3738 PF00999 Sodium/hydrogen exchanger family Atu3739 PF00162 Phosphoglycerate kinase Atu3740 PF00274 Fructose-bisphosphate aldolase class-I Atu3741 PF07690 Major Facilitator Superfamily Atu3742 PF07323 Protein of unknown function (DUF1465) Atu3743 PF01197 Ribosomal protein L31 Atu3744 PF00005 ABC transporter Atu3744 PF00664 ABC transporter transmembrane region Atu3745 PF00890 FAD binding domain Atu3746 PF00691 OmpA family Atu3748 PF00459 Inositol monophosphatase family Atu3749 PF08238 Sel1 repeat Atu3750 PF02581 Thiamine monophosphate synthase/TENI Atu3751 PF01925 Atu3751 Atu3752 PF04325 Protein of unknown function (DUF465) Atu3753 PF04325 Protein of unknown function (DUF465) Atu3754 PF00731 AIR carboxylase Atu3755 PF02222 ATP-grasp domain Atu3758 PF10073 Atu3758 Atu3759 PF06844 Protein of unknown function (DUF1244) Atu3760 PF05013 N-formylglutamate amidohydrolase Atu3761 PF06282 Atu3761 Atu3762 PF00224 Pyruvate kinase, barrel domain Atu3762 PF02887 Pyruvate kinase, alpha/beta domain Atu3763 PF05951 Atu3763 Atu3764 PF00072 Response regulator receiver domain Atu3764 PF00158 Sigma-54 interaction domain Atu3764 PF02954 Bacterial regulatory protein, Fis family Atu3765 PF01432 Peptidase family M3 Atu3765 PF08439 Oligopeptidase F Atu3766 PF01063 Aminotransferase class IV Atu3767 PF00990 GGDEF domain Atu3768 PF03435 Saccharopine dehydrogenase Atu3768 PF16653 Atu3768 Atu3770 PF00149 Calcineurin-like phosphoesterase Atu3770 PF01476 LysM domain Atu3770 PF02872 5'-nucleotidase, C-terminal domain Atu3771 PF00762 Ferrochelatase Atu3772 PF01145 SPFH domain / Band 7 family Atu3773 PF01957 NfeD-like C-terminal, partner-binding Atu3774 PF00571 CBS domain Atu3774 PF01380 SIS domain Atu3775 PF08447 PAS fold Atu3777 PF10082 Atu3777 Atu3778 PF00483 Nucleotidyl transferase Atu3779 PF01471 Putative peptidoglycan binding domain Atu3779 PF13406 Transglycosylase SLT domain Atu3780 PF04311 Atu3780 Atu3781 PF00072 Response regulator receiver domain Atu3781 PF00486 Transcriptional regulatory protein, C terminal Atu3782 PF00512 His Kinase A (phospho-acceptor) domain Atu3782 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu3783 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu3783 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Atu3784 PF00310 Glutamine amidotransferases class-II Atu3784 PF01493 GXGXG motif Atu3784 PF01645 Conserved region in glutamate synthase Atu3784 PF04898 Glutamate synthase central domain Atu3785 PF01212 Beta-eliminating lyase Atu3786 PF00072 Response regulator receiver domain Atu3786 PF00486 Transcriptional regulatory protein, C terminal Atu3787 PF00512 His Kinase A (phospho-acceptor) domain Atu3787 PF00582 Universal stress protein family Atu3787 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu3787 PF02702 Osmosensitive K+ channel His kinase sensor domain Atu3787 PF13492 GAF domain Atu3787 PF13493 Domain of unknown function (DUF4118) Atu3788 PF02669 Atu3788 Atu3789 PF00122 E1-E2 ATPase Atu3789 PF00702 haloacid dehalogenase-like hydrolase Atu3790 PF03814 Atu3790 Atu3791 PF00710 Asparaginase Atu3792 PF00324 Amino acid permease Atu3793 PF00206 Lyase Atu3793 PF10415 Fumarase C C-terminus Atu3794 PF00392 Bacterial regulatory proteins, gntR family Atu3794 PF07729 FCD domain Atu3795 PF00873 AcrB/AcrD/AcrF family Atu3796 PF16576 Atu3796 Atu3797 PF16576 Atu3797 Atu3798 PF00440 Bacterial regulatory proteins, tetR family Atu3799 PF00392 Bacterial regulatory proteins, gntR family Atu3799 PF07702 UTRA domain Atu3800 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu3801 PF00528 Binding-protein-dependent transport system inner membrane component Atu3802 PF00005 ABC transporter Atu3803 PF00221 Aromatic amino acid lyase Atu3804 PF07690 Major Facilitator Superfamily Atu3805 PF03690 Atu3805 Atu3806 PF01053 Cys/Met metabolism PLP-dependent enzyme Atu3807 PF01037 AsnC family Atu3807 PF13412 Winged helix-turn-helix DNA-binding Atu3808 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3808 PF03466 LysR substrate binding domain Atu3809 PF00248 Aldo/keto reductase family Atu3810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3810 PF03466 LysR substrate binding domain Atu3811 PF00857 Isochorismatase family Atu3812 PF04120 Atu3812 Atu3813 PF13561 Enoyl-(Acyl carrier protein) reductase Atu3814 PF05336 Domain of unknown function (DUF718) Atu3815 PF00392 Bacterial regulatory proteins, gntR family Atu3815 PF07729 FCD domain Atu3816 PF00248 Aldo/keto reductase family Atu3817 PF04295 Atu3817 Atu3817 PF08666 SAF domain Atu3818 PF00005 ABC transporter Atu3819 PF02653 Atu3819 Atu3820 PF02653 Atu3820 Atu3821 PF13407 Periplasmic binding protein domain Atu3823 PF01717 Cobalamin-independent synthase, Catalytic domain Atu3824 PF08908 Atu3824 Atu3826 PF03061 Thioesterase superfamily Atu3827 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3827 PF03466 LysR substrate binding domain Atu3828 PF00583 Acetyltransferase (GNAT) family Atu3829 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3829 PF03466 LysR substrate binding domain Atu3830 PF07690 Major Facilitator Superfamily Atu3831 PF00589 Phage integrase family Atu3831 PF13356 Domain of unknown function (DUF4102) Atu3849 PF00239 Resolvase, N terminal domain Atu3849 PF02796 Helix-turn-helix domain of resolvase Atu3850 PF12728 Helix-turn-helix domain Atu3854 PF13481 AAA domain Atu3860 PF01522 Polysaccharide deacetylase Atu3861 PF03061 Thioesterase superfamily Atu3863 PF06472 Atu3863 Atu3865 PF01841 Transglutaminase-like superfamily Atu3865 PF08379 Atu3865 Atu3865 PF09899 Atu3865 Atu3866 PF04168 Atu3866 Atu3866 PF14403 Atu3866 Atu3867 PF01841 Transglutaminase-like superfamily Atu3867 PF08379 Atu3867 Atu3868 PF00092 von Willebrand factor type A domain Atu3868 PF13400 Atu3868 Atu3869 PF00005 ABC transporter Atu3869 PF12848 ABC transporter Atu3870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atu3870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu3871 PF01070 FMN-dependent dehydrogenase Atu3873 PF00583 Acetyltransferase (GNAT) family Atu3873 PF12802 MarR family Atu3874 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Atu3874 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Atu3875 PF01791 DeoC/LacD family aldolase Atu3876 PF01266 FAD dependent oxidoreductase Atu3876 PF16901 Atu3876 Atu3877 PF00248 Aldo/keto reductase family Atu3878 PF04198 Putative sugar-binding domain Atu3879 PF02653 Atu3879 Atu3880 PF00005 ABC transporter Atu3881 PF13407 Periplasmic binding protein domain Atu3883 PF00072 Response regulator receiver domain Atu3884 PF05013 N-formylglutamate amidohydrolase Atu3885 PF00459 Inositol monophosphatase family Atu3886 PF12146 Putative lysophospholipase Atu3887 PF00011 Hsp20/alpha crystallin family Atu3888 PF13593 SBF-like CPA transporter family (DUF4137) Atu3889 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3889 PF03466 LysR substrate binding domain Atu3890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Atu3890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Atu3891 PF13416 Bacterial extracellular solute-binding protein Atu3892 PF09928 Atu3892 Atu3893 PF00528 Binding-protein-dependent transport system inner membrane component Atu3894 PF00528 Binding-protein-dependent transport system inner membrane component Atu3895 PF00005 ABC transporter Atu3895 PF08402 TOBE domain Atu3896 PF00005 ABC transporter Atu3897 PF01266 FAD dependent oxidoreductase Atu3897 PF16901 Atu3897 Atu3898 PF00455 Atu3898 Atu3898 PF08220 DeoR-like helix-turn-helix domain Atu3899 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu3899 PF10414 Sirohaem synthase dimerisation region Atu3899 PF13241 Putative NAD(P)-binding Atu3899 PF14824 Sirohaem biosynthesis protein central Atu3900 PF00384 Molybdopterin oxidoreductase Atu3900 PF01568 Molydopterin dinucleotide binding domain Atu3900 PF04324 BFD-like [2Fe-2S] binding domain Atu3900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atu3901 PF13806 Rieske-like [2Fe-2S] domain Atu3902 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Atu3902 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Atu3902 PF04324 BFD-like [2Fe-2S] binding domain Atu3902 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu3903 PF00005 ABC transporter Atu3904 PF00528 Binding-protein-dependent transport system inner membrane component Atu3905 PF13379 NMT1-like family Atu3906 PF13379 NMT1-like family Atu3907 PF00072 Response regulator receiver domain Atu3907 PF03861 ANTAR domain Atu3908 PF00392 Bacterial regulatory proteins, gntR family Atu3908 PF07729 FCD domain Atu3909 PF01566 Atu3909 Atu3910 PF03746 LamB/YcsF family Atu3911 PF07286 Protein of unknown function (DUF1445) Atu3912 PF02626 Allophanate hydrolase subunit 2 Atu3912 PF02682 Allophanate hydrolase subunit 1 Atu3913 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Atu3913 PF00364 Biotin-requiring enzyme Atu3913 PF02785 Biotin carboxylase C-terminal domain Atu3913 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu3914 PF00128 Alpha amylase, catalytic domain Atu3915 PF00376 MerR family regulatory protein Atu3915 PF09278 MerR, DNA binding Atu3916 PF00593 TonB dependent receptor Atu3916 PF07715 TonB-dependent Receptor Plug Domain Atu3917 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3917 PF02885 Glycosyl transferase family, helical bundle domain Atu3918 PF06772 Atu3918 Atu3922 PF03428 Atu3922 Atu3922 PF11800 Atu3922 Atu3923 PF02195 ParB-like nuclease domain Atu3923 PF07506 Atu3923 Atu3924 PF13614 AAA domain Atu3925 PF00890 FAD binding domain Atu3925 PF13454 FAD-NAD(P)-binding Atu3926 PF01042 Endoribonuclease L-PSP Atu3927 PF01168 Alanine racemase, N-terminal domain Atu3927 PF14031 Putative serine dehydratase domain Atu3928 PF07171 MlrC C-terminus Atu3928 PF07364 Protein of unknown function (DUF1485) Atu3929 PF05962 HutD Atu3930 PF00561 alpha/beta hydrolase fold Atu3931 PF01175 Urocanase Atu3931 PF17391 Atu3931 Atu3931 PF17392 Atu3931 Atu3932 PF05013 N-formylglutamate amidohydrolase Atu3933 PF00221 Aromatic amino acid lyase Atu3934 PF01979 Amidohydrolase family Atu3935 PF01979 Amidohydrolase family Atu3936 PF00392 Bacterial regulatory proteins, gntR family Atu3936 PF07702 UTRA domain Atu3947 PF01266 FAD dependent oxidoreductase Atu3948 PF01168 Alanine racemase, N-terminal domain Atu3948 PF14031 Putative serine dehydratase domain Atu3949 PF02423 Ornithine cyclodeaminase/mu-crystallin family Atu3950 PF00171 Aldehyde dehydrogenase family Atu3951 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3951 PF03466 LysR substrate binding domain Atu3952 PF01266 FAD dependent oxidoreductase Atu3953 PF05544 Proline racemase Atu3954 PF00528 Binding-protein-dependent transport system inner membrane component Atu3955 PF00528 Binding-protein-dependent transport system inner membrane component Atu3956 PF00005 ABC transporter Atu3956 PF00571 CBS domain Atu3957 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu3958 PF01266 FAD dependent oxidoreductase Atu3959 PF00171 Aldehyde dehydrogenase family Atu3960 PF00701 Dihydrodipicolinate synthetase family Atu3961 PF00392 Bacterial regulatory proteins, gntR family Atu3961 PF07729 FCD domain Atu3962 PF08450 SMP-30/Gluconolaconase/LRE-like region Atu3963 PF00392 Bacterial regulatory proteins, gntR family Atu3963 PF07729 FCD domain Atu3964 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu3964 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu3965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu3965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu3966 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu3966 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu3967 PF13416 Bacterial extracellular solute-binding protein Atu3968 PF00528 Binding-protein-dependent transport system inner membrane component Atu3969 PF00528 Binding-protein-dependent transport system inner membrane component Atu3970 PF00005 ABC transporter Atu3970 PF08402 TOBE domain Atu3971 PF00920 Dehydratase family Atu3972 PF01370 NAD dependent epimerase/dehydratase family Atu3973 PF03737 Demethylmenaquinone methyltransferase Atu3975 PF03275 UDP-galactopyranose mutase Atu3975 PF13450 NAD(P)-binding Rossmann-like domain Atu3976 PF13181 Tetratricopeptide repeat Atu3976 PF13844 Glycosyl transferase family 41 Atu3978 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3978 PF03466 LysR substrate binding domain Atu3979 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu3980 PF00857 Isochorismatase family Atu3982 PF07969 Amidohydrolase family Atu3984 PF05977 Transmembrane secretion effector Atu3985 PF03807 NADP oxidoreductase coenzyme F420-dependent Atu3985 PF14748 Pyrroline-5-carboxylate reductase dimerisation Atu3986 PF00929 Exonuclease Atu3987 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3987 PF03466 LysR substrate binding domain Atu3988 PF07690 Major Facilitator Superfamily Atu3990 PF00127 Copper binding proteins, plastocyanin/azurin family Atu3991 PF07731 Multicopper oxidase Atu3991 PF07732 Multicopper oxidase Atu3992 PF02321 Outer membrane efflux protein Atu3995 PF02311 AraC-like ligand binding domain Atu3995 PF12833 Helix-turn-helix domain Atu3996 PF13673 Acetyltransferase (GNAT) domain Atu3997 PF04055 Radical SAM superfamily Atu3997 PF06968 Biotin and Thiamin Synthesis associated domain Atu3998 PF00155 Aminotransferase class I and II Atu3999 PF13500 AAA domain Atu4000 PF00202 Aminotransferase class-III Atu4001 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Atu4001 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Atu4002 PF00892 EamA-like transporter family Atu4003 PF01361 Tautomerase enzyme Atu4004 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4004 PF03466 LysR substrate binding domain Atu4006 PF01037 AsnC family Atu4006 PF13404 AsnC-type helix-turn-helix domain Atu4007 PF00491 Arginase family Atu4009 PF00665 Integrase core domain Atu4009 PF01527 Transposase Atu4009 PF13276 Atu4009 Atu4011 PF00892 EamA-like transporter family Atu4012 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu4012 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu4013 PF00211 Adenylate and Guanylate cyclase catalytic domain Atu4015 PF07756 Atu4015 Atu4015 PF11972 Atu4015 Atu4017 PF00083 Sugar (and other) transporter Atu4018 PF00512 His Kinase A (phospho-acceptor) domain Atu4018 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu4019 PF00072 Response regulator receiver domain Atu4019 PF00486 Transcriptional regulatory protein, C terminal Atu4020 PF00884 Sulfatase Atu4020 PF08019 Atu4020 Atu4021 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4021 PF03466 LysR substrate binding domain Atu4022 PF00593 TonB dependent receptor Atu4022 PF07715 TonB-dependent Receptor Plug Domain Atu4023 PF01497 Periplasmic binding protein Atu4024 PF01032 FecCD transport family Atu4025 PF00005 ABC transporter Atu4026 PF06186 Atu4026 Atu4027 PF00034 Cytochrome c Atu4028 PF02631 RecX family Atu4029 PF08450 SMP-30/Gluconolaconase/LRE-like region Atu4030 PF02653 Atu4030 Atu4031 PF02653 Atu4031 Atu4032 PF00005 ABC transporter Atu4033 PF13407 Periplasmic binding protein domain Atu4034 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu4034 PF07730 Histidine kinase Atu4035 PF00072 Response regulator receiver domain Atu4035 PF00196 Bacterial regulatory proteins, luxR family Atu4036 PF01028 Eukaryotic DNA topoisomerase I, catalytic core Atu4037 PF07995 Glucose / Sorbosone dehydrogenase Atu4040 PF04445 Putative SAM-dependent methyltransferase Atu4041 PF00849 RNA pseudouridylate synthase Atu4042 PF01205 Uncharacterized protein family UPF0029 Atu4042 PF09186 Domain of unknown function (DUF1949) Atu4043 PF03486 HI0933-like protein Atu4044 PF00005 ABC transporter Atu4045 PF00528 Binding-protein-dependent transport system inner membrane component Atu4046 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu4047 PF00072 Response regulator receiver domain Atu4047 PF00512 His Kinase A (phospho-acceptor) domain Atu4047 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu4047 PF08447 PAS fold Atu4047 PF08448 PAS fold Atu4048 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu4049 PF02706 Chain length determinant protein Atu4049 PF10609 ParA/MinD ATPase like Atu4049 PF13807 Atu4049 Atu4050 PF00483 Nucleotidyl transferase Atu4051 PF00535 Glycosyl transferase family 2 Atu4052 PF00535 Glycosyl transferase family 2 Atu4053 PF00535 Glycosyl transferase family 2 Atu4055 PF00722 Glycosyl hydrolases family 16 Atu4056 PF01757 Atu4056 Atu4057 PF13440 Atu4057 Atu4057 PF14667 Polysaccharide biosynthesis C-terminal domain Atu4058 PF00535 Glycosyl transferase family 2 Atu4059 PF04230 Atu4059 Atu4060 PF00535 Glycosyl transferase family 2 Atu4061 PF11089 Atu4061 Atu4063 PF00515 Tetratricopeptide repeat Atu4063 PF07719 Tetratricopeptide repeat Atu4063 PF13181 Tetratricopeptide repeat Atu4064 PF01165 Ribosomal protein S21 Atu4066 PF01266 FAD dependent oxidoreductase Atu4068 PF04267 Sarcosine oxidase, delta subunit family Atu4069 PF01571 Aminomethyltransferase folate-binding domain Atu4069 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu4069 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu4069 PF13510 2Fe-2S iron-sulfur cluster binding domain Atu4070 PF04268 Sarcosine oxidase, gamma subunit family Atu4071 PF10094 Atu4071 Atu4072 PF01575 MaoC like domain Atu4073 PF00128 Alpha amylase, catalytic domain Atu4073 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Atu4074 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Atu4074 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Atu4074 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Atu4074 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Atu4075 PF00534 Glycosyl transferases group 1 Atu4075 PF08323 Starch synthase catalytic domain Atu4076 PF00483 Nucleotidyl transferase Atu4077 PF00128 Alpha amylase, catalytic domain Atu4077 PF02806 Alpha amylase, C-terminal all-beta domain Atu4077 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Atu4078 PF00343 Carbohydrate phosphorylase Atu4080 PF13230 Glutamine amidotransferases class-II Atu4081 PF01177 Asp/Glu/Hydantoin racemase Atu4082 PF01037 AsnC family Atu4082 PF13412 Winged helix-turn-helix DNA-binding Atu4083 PF01263 Aldose 1-epimerase Atu4085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atu4085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Atu4086 PF13561 Enoyl-(Acyl carrier protein) reductase Atu4087 PF00107 Zinc-binding dehydrogenase Atu4087 PF08240 Alcohol dehydrogenase GroES-like domain Atu4088 PF12802 MarR family Atu4089 PF00005 ABC transporter Atu4089 PF00664 ABC transporter transmembrane region Atu4090 PF00005 ABC transporter Atu4091 PF01654 Atu4091 Atu4092 PF02322 Atu4092 Atu4094 PF12200 Domain of unknown function (DUF3597) Atu4095 PF04226 Atu4095 Atu4096 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Atu4096 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Atu4097 PF00890 FAD binding domain Atu4097 PF02910 Fumarate reductase flavoprotein C-term Atu4098 PF02445 Quinolinate synthetase A protein Atu4100 PF08447 PAS fold Atu4103 PF02224 Cytidylate kinase Atu4104 PF00575 S1 RNA binding domain Atu4108 PF01612 3'-5' exonuclease Atu4109 PF05014 Nucleoside 2-deoxyribosyltransferase Atu4110 PF00106 short chain dehydrogenase Atu4112 PF00557 Metallopeptidase family M24 Atu4112 PF01321 Creatinase/Prolidase N-terminal domain Atu4113 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu4114 PF00528 Binding-protein-dependent transport system inner membrane component Atu4115 PF00528 Binding-protein-dependent transport system inner membrane component Atu4115 PF12911 Atu4115 Atu4116 PF00005 ABC transporter Atu4116 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu4117 PF00005 ABC transporter Atu4117 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu4118 PF00392 Bacterial regulatory proteins, gntR family Atu4118 PF07729 FCD domain Atu4120 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu4120 PF13378 Enolase C-terminal domain-like Atu4121 PF00296 Luciferase-like monooxygenase Atu4122 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4122 PF03466 LysR substrate binding domain Atu4123 PF13458 Periplasmic binding protein Atu4124 PF00005 ABC transporter Atu4124 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu4125 PF00005 ABC transporter Atu4126 PF02653 Atu4126 Atu4127 PF02653 Atu4127 Atu4128 PF00732 GMC oxidoreductase Atu4128 PF05199 GMC oxidoreductase Atu4129 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atu4129 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Atu4130 PF00501 AMP-binding enzyme Atu4130 PF13193 AMP-binding enzyme C-terminal domain Atu4131 PF13561 Enoyl-(Acyl carrier protein) reductase Atu4132 PF12833 Helix-turn-helix domain Atu4132 PF14525 Atu4132 Atu4135 PF01011 PQQ enzyme repeat Atu4135 PF13360 PQQ-like domain Atu4136 PF05974 Domain of unknown function (DUF892) Atu4137 PF02308 Atu4137 Atu4138 PF01266 FAD dependent oxidoreductase Atu4140 PF09622 Atu4140 Atu4141 PF03479 Domain of unknown function (DUF296) Atu4142 PF01965 DJ-1/PfpI family Atu4145 PF05013 N-formylglutamate amidohydrolase Atu4146 PF08014 Atu4146 Atu4147 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Atu4147 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Atu4148 PF16363 Atu4148 Atu4149 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Atu4149 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Atu4149 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Atu4150 PF00892 EamA-like transporter family Atu4151 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4151 PF03466 LysR substrate binding domain Atu4153 PF00171 Aldehyde dehydrogenase family Atu4154 PF13379 NMT1-like family Atu4155 PF00528 Binding-protein-dependent transport system inner membrane component Atu4156 PF00005 ABC transporter Atu4157 PF00171 Aldehyde dehydrogenase family Atu4157 PF01619 Proline dehydrogenase Atu4157 PF14850 DNA-binding domain of Proline dehydrogenase Atu4159 PF01037 AsnC family Atu4159 PF13412 Winged helix-turn-helix DNA-binding Atu4160 PF04542 Sigma-70 region 2 Atu4160 PF08281 Sigma-70, region 4 Atu4162 PF00072 Response regulator receiver domain Atu4163 PF07536 Atu4163 Atu4164 PF07536 Atu4164 Atu4165 PF05239 PRC-barrel domain Atu4166 PF16363 Atu4166 Atu4168 PF05957 Atu4168 Atu4169 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Atu4170 PF03435 Saccharopine dehydrogenase Atu4170 PF16653 Atu4170 Atu4171 PF00270 DEAD/DEAH box helicase Atu4171 PF00271 Helicase conserved C-terminal domain Atu4171 PF03880 DbpA RNA binding domain Atu4172 PF00696 Amino acid kinase family Atu4172 PF01842 ACT domain Atu4172 PF13840 ACT domain Atu4173 PF00391 PEP-utilising enzyme, mobile domain Atu4173 PF02896 PEP-utilising enzyme, TIM barrel domain Atu4173 PF05524 PEP-utilising enzyme, N-terminal Atu4173 PF13185 GAF domain Atu4174 PF00472 RF-1 domain Atu4174 PF03462 PCRF domain Atu4175 PF05175 Methyltransferase small domain Atu4176 PF13763 Atu4176 Atu4177 PF00004 ATPase family associated with various cellular activities (AAA) Atu4177 PF02861 Clp amino terminal domain Atu4177 PF07724 AAA domain (Cdc48 subfamily) Atu4177 PF10431 C-terminal, D2-small domain, of ClpB protein Atu4178 PF01551 Peptidase family M23 Atu4189 PF00701 Dihydrodipicolinate synthetase family Atu4190 PF08450 SMP-30/Gluconolaconase/LRE-like region Atu4191 PF00392 Bacterial regulatory proteins, gntR family Atu4191 PF07729 FCD domain Atu4192 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu4193 PF00528 Binding-protein-dependent transport system inner membrane component Atu4194 PF00528 Binding-protein-dependent transport system inner membrane component Atu4194 PF12911 Atu4194 Atu4195 PF00005 ABC transporter Atu4195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu4196 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu4196 PF13378 Enolase C-terminal domain-like Atu4197 PF01263 Aldose 1-epimerase Atu4199 PF00440 Bacterial regulatory proteins, tetR family Atu4199 PF13305 WHG domain Atu4201 PF03358 NADPH-dependent FMN reductase Atu4202 PF13649 Methyltransferase domain Atu4203 PF01161 Phosphatidylethanolamine-binding protein Atu4204 PF12833 Helix-turn-helix domain Atu4205 PF00440 Bacterial regulatory proteins, tetR family Atu4205 PF02909 Tetracyclin repressor, C-terminal all-alpha domain Atu4206 PF07690 Major Facilitator Superfamily Atu4207 PF00480 ROK family Atu4208 PF01547 Bacterial extracellular solute-binding protein Atu4209 PF00528 Binding-protein-dependent transport system inner membrane component Atu4210 PF00528 Binding-protein-dependent transport system inner membrane component Atu4211 PF00005 ABC transporter Atu4211 PF08402 TOBE domain Atu4212 PF03009 Glycerophosphoryl diester phosphodiesterase family Atu4214 PF00313 'Cold-shock' DNA-binding domain Atu4215 PF00091 Tubulin/FtsZ family, GTPase domain Atu4216 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu4216 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu4217 PF00440 Bacterial regulatory proteins, tetR family Atu4218 PF16576 Atu4218 Atu4219 PF00873 AcrB/AcrD/AcrF family Atu4220 PF00106 short chain dehydrogenase Atu4221 PF04268 Sarcosine oxidase, gamma subunit family Atu4222 PF01571 Aminomethyltransferase folate-binding domain Atu4222 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu4222 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu4222 PF13510 2Fe-2S iron-sulfur cluster binding domain Atu4223 PF04267 Sarcosine oxidase, delta subunit family Atu4224 PF01266 FAD dependent oxidoreductase Atu4225 PF01965 DJ-1/PfpI family Atu4225 PF12833 Helix-turn-helix domain Atu4226 PF01381 Helix-turn-helix Atu4226 PF07883 Cupin domain Atu4227 PF13522 Glutamine amidotransferase domain Atu4228 PF01493 GXGXG motif Atu4229 PF01645 Conserved region in glutamate synthase Atu4230 PF00120 Glutamine synthetase, catalytic domain Atu4231 PF00551 Formyl transferase Atu4231 PF13740 ACT domain Atu4232 PF00392 Bacterial regulatory proteins, gntR family Atu4232 PF07729 FCD domain Atu4233 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu4234 PF00528 Binding-protein-dependent transport system inner membrane component Atu4235 PF00005 ABC transporter Atu4236 PF00465 Iron-containing alcohol dehydrogenase Atu4237 PF06684 Amino acid synthesis Atu4238 PF12697 Alpha/beta hydrolase family Atu4239 PF01613 Flavin reductase like domain Atu4240 PF00296 Luciferase-like monooxygenase Atu4241 PF00171 Aldehyde dehydrogenase family Atu4242 PF07978 NIPSNAP Atu4243 PF13416 Bacterial extracellular solute-binding protein Atu4244 PF00528 Binding-protein-dependent transport system inner membrane component Atu4245 PF00528 Binding-protein-dependent transport system inner membrane component Atu4246 PF00005 ABC transporter Atu4246 PF08402 TOBE domain Atu4247 PF00171 Aldehyde dehydrogenase family Atu4249 PF00005 ABC transporter Atu4249 PF08402 TOBE domain Atu4250 PF00528 Binding-protein-dependent transport system inner membrane component Atu4251 PF00528 Binding-protein-dependent transport system inner membrane component Atu4252 PF01547 Bacterial extracellular solute-binding protein Atu4253 PF12831 FAD dependent oxidoreductase Atu4254 PF00356 Bacterial regulatory proteins, lacI family Atu4254 PF13377 Periplasmic binding protein-like domain Atu4255 PF13302 Acetyltransferase (GNAT) domain Atu4256 PF00005 ABC transporter Atu4256 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu4257 PF00528 Binding-protein-dependent transport system inner membrane component Atu4258 PF00528 Binding-protein-dependent transport system inner membrane component Atu4259 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu4260 PF00528 Binding-protein-dependent transport system inner membrane component Atu4261 PF00005 ABC transporter Atu4262 PF09084 NMT1/THI5 like Atu4263 PF04303 PrpF protein Atu4264 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4264 PF03466 LysR substrate binding domain Atu4266 PF00155 Aminotransferase class I and II Atu4266 PF00392 Bacterial regulatory proteins, gntR family Atu4267 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu4268 PF01810 Atu4268 Atu4269 PF02567 Phenazine biosynthesis-like protein Atu4270 PF00293 NUDIX domain Atu4271 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4271 PF03466 LysR substrate binding domain Atu4272 PF00364 Biotin-requiring enzyme Atu4273 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Atu4273 PF02785 Biotin carboxylase C-terminal domain Atu4273 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu4275 PF02682 Allophanate hydrolase subunit 1 Atu4276 PF02626 Allophanate hydrolase subunit 2 Atu4277 PF03746 LamB/YcsF family Atu4278 PF00155 Aminotransferase class I and II Atu4279 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4279 PF03466 LysR substrate binding domain Atu4280 PF00106 short chain dehydrogenase Atu4281 PF00528 Binding-protein-dependent transport system inner membrane component Atu4282 PF00528 Binding-protein-dependent transport system inner membrane component Atu4283 PF00005 ABC transporter Atu4284 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu4285 PF03737 Demethylmenaquinone methyltransferase Atu4286 PF17124 Atu4286 Atu4287 PF01965 DJ-1/PfpI family Atu4288 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4288 PF03466 LysR substrate binding domain Atu4289 PF00107 Zinc-binding dehydrogenase Atu4289 PF08240 Alcohol dehydrogenase GroES-like domain Atu4291 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4291 PF03466 LysR substrate binding domain Atu4292 PF07690 Major Facilitator Superfamily Atu4293 PF00296 Luciferase-like monooxygenase Atu4294 PF00248 Aldo/keto reductase family Atu4295 PF01488 Shikimate / quinate 5-dehydrogenase Atu4295 PF08501 Shikimate dehydrogenase substrate binding domain Atu4296 PF00732 GMC oxidoreductase Atu4296 PF05199 GMC oxidoreductase Atu4297 PF12833 Helix-turn-helix domain Atu4298 PF00924 Mechanosensitive ion channel Atu4299 PF02082 Transcriptional regulator Atu4300 PF00072 Response regulator receiver domain Atu4300 PF00196 Bacterial regulatory proteins, luxR family Atu4301 PF13460 NADH(P)-binding Atu4302 PF07883 Cupin domain Atu4303 PF00571 CBS domain Atu4304 PF00027 Cyclic nucleotide-binding domain Atu4304 PF00924 Mechanosensitive ion channel Atu4305 PF00512 His Kinase A (phospho-acceptor) domain Atu4305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu4305 PF08447 PAS fold Atu4306 PF00072 Response regulator receiver domain Atu4307 PF00753 Metallo-beta-lactamase superfamily Atu4308 PF09955 Atu4308 Atu4309 PF01965 DJ-1/PfpI family Atu4309 PF12833 Helix-turn-helix domain Atu4310 PF01266 FAD dependent oxidoreductase Atu4311 PF04267 Sarcosine oxidase, delta subunit family Atu4312 PF01571 Aminomethyltransferase folate-binding domain Atu4312 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu4312 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu4312 PF13510 2Fe-2S iron-sulfur cluster binding domain Atu4313 PF04268 Sarcosine oxidase, gamma subunit family Atu4314 PF00464 Serine hydroxymethyltransferase Atu4315 PF00551 Formyl transferase Atu4316 PF07690 Major Facilitator Superfamily Atu4317 PF00440 Bacterial regulatory proteins, tetR family Atu4318 PF00107 Zinc-binding dehydrogenase Atu4318 PF08240 Alcohol dehydrogenase GroES-like domain Atu4319 PF12833 Helix-turn-helix domain Atu4320 PF13407 Periplasmic binding protein domain Atu4321 PF00005 ABC transporter Atu4322 PF02653 Atu4322 Atu4323 PF00106 short chain dehydrogenase Atu4324 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Atu4324 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Atu4325 PF13561 Enoyl-(Acyl carrier protein) reductase Atu4326 PF00083 Sugar (and other) transporter Atu4326 PF08946 Osmosensory transporter coiled coil Atu4329 PF02563 Polysaccharide biosynthesis/export protein Atu4329 PF10531 SLBB domain Atu4330 PF00069 Protein kinase domain Atu4331 PF00481 Protein phosphatase 2C Atu4331 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) Atu4332 PF06744 Atu4332 Atu4332 PF06761 Atu4332 Atu4332 PF14331 Atu4332 Atu4333 PF00691 OmpA family Atu4333 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) Atu4334 PF05936 Atu4334 Atu4335 PF00498 FHA domain Atu4336 PF06996 Atu4336 Atu4337 PF05947 Atu4337 Atu4338 PF04965 Gene 25-like lysozyme Atu4339 PF07024 ImpE protein Atu4340 PF05943 Atu4340 Atu4341 PF05943 Atu4341 Atu4342 PF05591 Atu4342 Atu4343 PF06812 Atu4343 Atu4344 PF00004 ATPase family associated with various cellular activities (AAA) Atu4344 PF02861 Clp amino terminal domain Atu4344 PF07724 AAA domain (Cdc48 subfamily) Atu4344 PF10431 C-terminal, D2-small domain, of ClpB protein Atu4345 PF05638 Protein of unknown function (DUF796) Atu4347 PF14113 Domain of unknown function (DUF4285) Atu4348 PF05954 Phage late control gene D protein (GPD) Atu4349 PF13503 Atu4349 Atu4350 PF15604 Atu4350 Atu4351 PF08887 Atu4351 Atu4351 PF08906 Atu4351 Atu4352 PF05488 PAAR motif Atu4353 PF00563 EAL domain Atu4353 PF00990 GGDEF domain Atu4354 PF00149 Calcineurin-like phosphoesterase Atu4355 PF00571 CBS domain Atu4355 PF03471 Transporter associated domain Atu4355 PF03741 Atu4355 Atu4356 PF07182 Atu4356 Atu4357 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP Atu4358 PF00005 ABC transporter Atu4358 PF08402 TOBE domain Atu4359 PF00528 Binding-protein-dependent transport system inner membrane component Atu4360 PF00528 Binding-protein-dependent transport system inner membrane component Atu4361 PF01547 Bacterial extracellular solute-binding protein Atu4362 PF01261 Xylose isomerase-like TIM barrel Atu4363 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu4364 PF00356 Bacterial regulatory proteins, lacI family Atu4364 PF13377 Periplasmic binding protein-like domain Atu4366 PF13561 Enoyl-(Acyl carrier protein) reductase Atu4367 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4367 PF03466 LysR substrate binding domain Atu4368 PF07883 Cupin domain Atu4369 PF13407 Periplasmic binding protein domain Atu4370 PF00005 ABC transporter Atu4371 PF02653 Atu4371 Atu4372 PF02653 Atu4372 Atu4373 PF00356 Bacterial regulatory proteins, lacI family Atu4373 PF13377 Periplasmic binding protein-like domain Atu4374 PF01261 Xylose isomerase-like TIM barrel Atu4374 PF07582 AP endonuclease family 2 C terminus Atu4375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu4375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu4376 PF01261 Xylose isomerase-like TIM barrel Atu4377 PF00732 GMC oxidoreductase Atu4377 PF05199 GMC oxidoreductase Atu4378 PF13618 Atu4378 Atu4379 PF00034 Cytochrome c Atu4380 PF00027 Cyclic nucleotide-binding domain Atu4380 PF13545 Crp-like helix-turn-helix domain Atu4381 PF03781 Sulfatase-modifying factor enzyme 1 Atu4382 PF00394 Multicopper oxidase Atu4382 PF07732 Multicopper oxidase Atu4383 PF05940 Atu4383 Atu4384 PF10006 Atu4384 Atu4385 PF10006 Atu4385 Atu4386 PF00092 von Willebrand factor type A domain Atu4387 PF07728 AAA domain (dynein-related subfamily) Atu4387 PF08406 Atu4387 Atu4388 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atu4389 PF00034 Cytochrome c Atu4391 PF00510 Cytochrome c oxidase subunit III Atu4392 PF07298 Atu4392 Atu4393 PF02441 Flavoprotein Atu4394 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Atu4395 PF04343 Atu4395 Atu4396 PF02036 SCP-2 sterol transfer family Atu4397 PF01136 Atu4397 Atu4398 PF01136 Atu4398 Atu4400 PF00593 TonB dependent receptor Atu4400 PF07715 TonB-dependent Receptor Plug Domain Atu4401 PF13379 NMT1-like family Atu4402 PF00528 Binding-protein-dependent transport system inner membrane component Atu4403 PF00005 ABC transporter Atu4404 PF05940 Atu4404 Atu4405 PF06796 Atu4405 Atu4406 PF12838 4Fe-4S dicluster domain Atu4406 PF13187 4Fe-4S dicluster domain Atu4407 PF03927 NapD protein Atu4408 PF00384 Molybdopterin oxidoreductase Atu4408 PF01568 Molydopterin dinucleotide binding domain Atu4408 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atu4409 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) Atu4410 PF03264 NapC/NirT cytochrome c family, N-terminal region Atu4411 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4411 PF03466 LysR substrate binding domain Atu4412 PF00149 Calcineurin-like phosphoesterase Atu4412 PF00353 Hemolysin-type calcium-binding repeat (2 copies) Atu4412 PF06594 Atu4412 Atu4413 PF00005 ABC transporter Atu4413 PF00664 ABC transporter transmembrane region Atu4414 PF13437 HlyD family secretion protein Atu4414 PF13533 Biotin-lipoyl like Atu4415 PF05787 Bacterial protein of unknown function (DUF839) Atu4416 PF01648 4'-phosphopantetheinyl transferase superfamily Atu4418 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu4418 PF02770 Acyl-CoA dehydrogenase, middle domain Atu4418 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu4419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4419 PF03466 LysR substrate binding domain Atu4420 PF00356 Bacterial regulatory proteins, lacI family Atu4420 PF13377 Periplasmic binding protein-like domain Atu4421 PF13416 Bacterial extracellular solute-binding protein Atu4422 PF00528 Binding-protein-dependent transport system inner membrane component Atu4423 PF00528 Binding-protein-dependent transport system inner membrane component Atu4424 PF00005 ABC transporter Atu4425 PF01156 Inosine-uridine preferring nucleoside hydrolase Atu4426 PF01979 Amidohydrolase family Atu4426 PF13382 Adenine deaminase C-terminal domain Atu4427 PF03796 DnaB-like helicase C terminal domain Atu4428 PF01546 Peptidase family M20/M25/M40 Atu4428 PF07687 Peptidase dimerisation domain Atu4429 PF00156 Phosphoribosyl transferase domain Atu4430 PF01244 Membrane dipeptidase (Peptidase family M19) Atu4431 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu4432 PF00528 Binding-protein-dependent transport system inner membrane component Atu4433 PF00528 Binding-protein-dependent transport system inner membrane component Atu4433 PF12911 Atu4433 Atu4434 PF00005 ABC transporter Atu4435 PF00005 ABC transporter Atu4436 PF01609 Transposase DDE domain Atu4436 PF05598 Atu4436 Atu4437 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4437 PF03466 LysR substrate binding domain Atu4438 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu4439 PF00528 Binding-protein-dependent transport system inner membrane component Atu4440 PF00528 Binding-protein-dependent transport system inner membrane component Atu4441 PF01425 Amidase Atu4442 PF01965 DJ-1/PfpI family Atu4443 PF13467 Ribbon-helix-helix domain Atu4444 PF01546 Peptidase family M20/M25/M40 Atu4444 PF07687 Peptidase dimerisation domain Atu4445 PF00005 ABC transporter Atu4445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu4446 PF04198 Putative sugar-binding domain Atu4447 PF01547 Bacterial extracellular solute-binding protein Atu4448 PF00528 Binding-protein-dependent transport system inner membrane component Atu4449 PF00528 Binding-protein-dependent transport system inner membrane component Atu4450 PF00005 ABC transporter Atu4450 PF08402 TOBE domain Atu4451 PF01232 Mannitol dehydrogenase Rossmann domain Atu4451 PF08125 Mannitol dehydrogenase C-terminal domain Atu4452 PF13419 Haloacid dehalogenase-like hydrolase Atu4453 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Atu4453 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Atu4454 PF01418 Helix-turn-helix domain, rpiR family Atu4456 PF07264 Etoposide-induced protein 2 Atu4457 PF00633 Helix-hairpin-helix motif Atu4457 PF00730 HhH-GPD superfamily base excision DNA repair protein Atu4457 PF10576 Iron-sulfur binding domain of endonuclease III Atu4458 PF10003 Atu4458 Atu4459 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Atu4459 PF12833 Helix-turn-helix domain Atu4460 PF01402 Ribbon-helix-helix protein, copG family Atu4461 PF05016 Plasmid stabilisation system protein Atu4462 PF04198 Putative sugar-binding domain Atu4462 PF13384 Homeodomain-like domain Atu4464 PF00923 Transaldolase Atu4465 PF01614 Bacterial transcriptional regulator Atu4465 PF09339 IclR helix-turn-helix domain Atu4466 PF13561 Enoyl-(Acyl carrier protein) reductase Atu4467 PF07043 Atu4467 Atu4468 PF00950 Atu4468 Atu4469 PF00950 Atu4469 Atu4470 PF00005 ABC transporter Atu4471 PF01297 Periplasmic solute binding protein family Atu4473 PF00152 tRNA synthetases class II (D, K and N) Atu4473 PF01336 OB-fold nucleic acid binding domain Atu4474 PF00749 tRNA synthetases class I (E and Q), catalytic domain Atu4475 PF02080 TrkA-C domain Atu4475 PF03600 Citrate transporter Atu4476 PF03741 Atu4476 Atu4477 PF00440 Bacterial regulatory proteins, tetR family Atu4477 PF14246 AefR-like transcriptional repressor, C-terminal region Atu4478 PF00529 HlyD family secretion protein Atu4478 PF16576 Atu4478 Atu4479 PF07690 Major Facilitator Superfamily Atu4480 PF01243 Pyridoxamine 5'-phosphate oxidase Atu4481 PF00356 Bacterial regulatory proteins, lacI family Atu4481 PF13407 Periplasmic binding protein domain Atu4482 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Atu4482 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Atu4485 PF00232 Glycosyl hydrolase family 1 Atu4486 PF00881 Nitroreductase family Atu4487 PF00005 ABC transporter Atu4487 PF09383 NIL domain Atu4488 PF00528 Binding-protein-dependent transport system inner membrane component Atu4489 PF03180 NLPA lipoprotein Atu4490 PF00563 EAL domain Atu4490 PF00990 GGDEF domain Atu4490 PF05228 Atu4490 Atu4491 PF00581 Rhodanese-like domain Atu4492 PF05235 CHAD domain Atu4493 PF01928 CYTH domain Atu4494 PF01081 KDPG and KHG aldolase Atu4495 PF04391 Atu4495 Atu4496 PF13302 Acetyltransferase (GNAT) domain Atu4498 PF03824 Atu4498 Atu4499 PF06226 Atu4499 Atu4500 PF07690 Major Facilitator Superfamily Atu4501 PF12894 Anaphase-promoting complex subunit 4 WD40 domain Atu4502 PF02492 CobW/HypB/UreG, nucleotide-binding domain Atu4502 PF07683 Cobalamin synthesis protein cobW C-terminal domain Atu4503 PF02633 Creatinine amidohydrolase Atu4504 PF12802 MarR family Atu4505 PF00356 Bacterial regulatory proteins, lacI family Atu4505 PF13377 Periplasmic binding protein-like domain Atu4507 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atu4507 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu4508 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu4509 PF04962 KduI/IolB family Atu4510 PF01261 Xylose isomerase-like TIM barrel Atu4511 PF00205 Thiamine pyrophosphate enzyme, central domain Atu4511 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atu4511 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Atu4512 PF00294 pfkB family carbohydrate kinase Atu4512 PF09863 Uncharacterized protein conserved in bacteria (DUF2090) Atu4514 PF01380 SIS domain Atu4514 PF01418 Helix-turn-helix domain, rpiR family Atu4515 PF00005 ABC transporter Atu4516 PF00005 ABC transporter Atu4516 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu4517 PF02653 Atu4517 Atu4518 PF02653 Atu4518 Atu4519 PF13458 Periplasmic binding protein Atu4521 PF06445 GyrI-like small molecule binding domain Atu4521 PF12833 Helix-turn-helix domain Atu4523 PF00528 Binding-protein-dependent transport system inner membrane component Atu4524 PF00528 Binding-protein-dependent transport system inner membrane component Atu4525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu4526 PF00005 ABC transporter Atu4526 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu4528 PF03992 Antibiotic biosynthesis monooxygenase Atu4529 PF01261 Xylose isomerase-like TIM barrel Atu4529 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal Atu4530 PF00440 Bacterial regulatory proteins, tetR family Atu4531 PF01220 Dehydroquinase class II Atu4532 PF08501 Shikimate dehydrogenase substrate binding domain Atu4533 PF00005 ABC transporter Atu4534 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu4535 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu4536 PF00528 Binding-protein-dependent transport system inner membrane component Atu4537 PF00528 Binding-protein-dependent transport system inner membrane component Atu4538 PF00206 Lyase Atu4539 PF00775 Dioxygenase Atu4540 PF00775 Dioxygenase Atu4540 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal Atu4541 PF02627 Carboxymuconolactone decarboxylase family Atu4542 PF12146 Putative lysophospholipase Atu4543 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4543 PF03466 LysR substrate binding domain Atu4544 PF01494 FAD binding domain Atu4545 PF02311 AraC-like ligand binding domain Atu4545 PF12833 Helix-turn-helix domain Atu4546 PF01614 Bacterial transcriptional regulator Atu4546 PF09339 IclR helix-turn-helix domain Atu4547 PF01144 Coenzyme A transferase Atu4548 PF01144 Coenzyme A transferase Atu4549 PF00108 Thiolase, N-terminal domain Atu4549 PF02803 Thiolase, C-terminal domain Atu4550 PF00356 Bacterial regulatory proteins, lacI family Atu4550 PF13407 Periplasmic binding protein domain Atu4551 PF13407 Periplasmic binding protein domain Atu4552 PF13407 Periplasmic binding protein domain Atu4553 PF01261 Xylose isomerase-like TIM barrel Atu4554 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu4554 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu4555 PF01261 Xylose isomerase-like TIM barrel Atu4556 PF00356 Bacterial regulatory proteins, lacI family Atu4556 PF13377 Periplasmic binding protein-like domain Atu4557 PF00528 Binding-protein-dependent transport system inner membrane component Atu4558 PF00528 Binding-protein-dependent transport system inner membrane component Atu4559 PF00005 ABC transporter Atu4560 PF00295 Glycosyl hydrolases family 28 Atu4561 PF07470 Glycosyl Hydrolase Family 88 Atu4564 PF13416 Bacterial extracellular solute-binding protein Atu4566 PF01569 PAP2 superfamily Atu4566 PF12951 Atu4566 Atu4567 PF00480 ROK family Atu4568 PF13416 Bacterial extracellular solute-binding protein Atu4569 PF00005 ABC transporter Atu4569 PF08402 TOBE domain Atu4570 PF00528 Binding-protein-dependent transport system inner membrane component Atu4571 PF00528 Binding-protein-dependent transport system inner membrane component Atu4572 PF03009 Glycerophosphoryl diester phosphodiesterase family Atu4572 PF16387 Atu4572 Atu4573 PF00459 Inositol monophosphatase family Atu4574 PF00106 short chain dehydrogenase Atu4575 PF12833 Helix-turn-helix domain Atu4575 PF12852 Cupin Atu4576 PF00480 ROK family Atu4577 PF13343 Bacterial extracellular solute-binding protein Atu4578 PF00005 ABC transporter Atu4578 PF08402 TOBE domain Atu4579 PF00528 Binding-protein-dependent transport system inner membrane component Atu4581 PF01613 Flavin reductase like domain Atu4582 PF00037 4Fe-4S binding domain Atu4582 PF11953 Domain of unknown function (DUF3470) Atu4583 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Atu4583 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Atu4584 PF00440 Bacterial regulatory proteins, tetR family Atu4585 PF01872 RibD C-terminal domain Atu4586 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family Atu4588 PF01758 Sodium Bile acid symporter family Atu4590 PF00248 Aldo/keto reductase family Atu4591 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4591 PF03466 LysR substrate binding domain Atu4593 PF01557 Fumarylacetoacetate (FAA) hydrolase family Atu4595 PF13561 Enoyl-(Acyl carrier protein) reductase Atu4596 PF09084 NMT1/THI5 like Atu4597 PF00528 Binding-protein-dependent transport system inner membrane component Atu4598 PF00005 ABC transporter Atu4599 PF01614 Bacterial transcriptional regulator Atu4599 PF09339 IclR helix-turn-helix domain Atu4600 PF00005 ABC transporter Atu4600 PF00664 ABC transporter transmembrane region Atu4601 PF00665 Integrase core domain Atu4601 PF13276 Atu4601 Atu4602 PF01527 Transposase Atu4604 PF13276 Atu4604 Atu4604 PF13683 Atu4604 Atu4605 PF01527 Transposase Atu4606 PF00132 Bacterial transferase hexapeptide (six repeats) Atu4606 PF05045 Atu4606 Atu4607 PF01757 Atu4607 Atu4608 PF00535 Glycosyl transferase family 2 Atu4608 PF13489 Methyltransferase domain Atu4609 PF13641 Glycosyltransferase like family 2 Atu4610 PF01370 NAD dependent epimerase/dehydratase family Atu4613 PF00534 Glycosyl transferases group 1 Atu4613 PF00535 Glycosyl transferase family 2 Atu4614 PF00535 Glycosyl transferase family 2 Atu4615 PF00483 Nucleotidyl transferase Atu4616 PF04321 RmlD substrate binding domain Atu4617 PF16363 Atu4617 Atu4618 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Atu4619 PF00580 UvrD/REP helicase N-terminal domain Atu4619 PF13361 UvrD-like helicase C-terminal domain Atu4620 PF00005 ABC transporter Atu4621 PF00005 ABC transporter Atu4622 PF00528 Binding-protein-dependent transport system inner membrane component Atu4622 PF12911 Atu4622 Atu4623 PF00528 Binding-protein-dependent transport system inner membrane component Atu4624 PF00392 Bacterial regulatory proteins, gntR family Atu4624 PF07729 FCD domain Atu4625 PF03786 D-mannonate dehydratase (UxuA) Atu4626 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu4628 PF00563 EAL domain Atu4628 PF00990 GGDEF domain Atu4628 PF03707 Atu4628 Atu4629 PF13561 Enoyl-(Acyl carrier protein) reductase Atu4631 PF02735 Ku70/Ku80 beta-barrel domain Atu4632 PF01068 ATP dependent DNA ligase domain Atu4632 PF04679 ATP dependent DNA ligase C terminal region Atu4632 PF13298 DNA polymerase Ligase (LigD) Atu4633 PF01384 Atu4633 Atu4634 PF01865 Protein of unknown function DUF47 Atu4635 PF00293 NUDIX domain Atu4636 PF00873 AcrB/AcrD/AcrF family Atu4637 PF16576 Atu4637 Atu4638 PF00072 Response regulator receiver domain Atu4638 PF00486 Transcriptional regulatory protein, C terminal Atu4639 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu4640 PF11769 Atu4640 Atu4641 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4641 PF03466 LysR substrate binding domain Atu4642 PF00141 Peroxidase Atu4644 PF12833 Helix-turn-helix domain Atu4645 PF00171 Aldehyde dehydrogenase family Atu4646 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4646 PF03466 LysR substrate binding domain Atu4647 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu4648 PF00884 Sulfatase Atu4648 PF12411 Atu4648 Atu4649 PF00294 pfkB family carbohydrate kinase Atu4650 PF00005 ABC transporter Atu4650 PF03459 TOBE domain Atu4651 PF00206 Lyase Atu4651 PF14698 Argininosuccinate lyase C-terminal Atu4652 PF00528 Binding-protein-dependent transport system inner membrane component Atu4653 PF00528 Binding-protein-dependent transport system inner membrane component Atu4654 PF13416 Bacterial extracellular solute-binding protein Atu4655 PF00480 ROK family Atu4656 PF02585 GlcNAc-PI de-N-acetylase Atu4657 PF00892 EamA-like transporter family Atu4659 PF02311 AraC-like ligand binding domain Atu4659 PF12833 Helix-turn-helix domain Atu4660 PF02056 Family 4 glycosyl hydrolase Atu4660 PF11975 Family 4 glycosyl hydrolase C-terminal domain Atu4661 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu4662 PF00528 Binding-protein-dependent transport system inner membrane component Atu4663 PF00528 Binding-protein-dependent transport system inner membrane component Atu4663 PF12911 Atu4663 Atu4664 PF00005 ABC transporter Atu4664 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu4665 PF02056 Family 4 glycosyl hydrolase Atu4665 PF11975 Family 4 glycosyl hydrolase C-terminal domain Atu4666 PF13437 HlyD family secretion protein Atu4666 PF13533 Biotin-lipoyl like Atu4667 PF00005 ABC transporter Atu4667 PF12698 ABC-2 family transporter protein Atu4668 PF12698 ABC-2 family transporter protein Atu4671 PF00072 Response regulator receiver domain Atu4673 PF00091 Tubulin/FtsZ family, GTPase domain Atu4673 PF12327 FtsZ family, C-terminal domain Atu4674 PF00392 Bacterial regulatory proteins, gntR family Atu4674 PF07729 FCD domain Atu4675 PF00701 Dihydrodipicolinate synthetase family Atu4676 PF02615 Malate/L-lactate dehydrogenase Atu4678 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu4679 PF00528 Binding-protein-dependent transport system inner membrane component Atu4680 PF00528 Binding-protein-dependent transport system inner membrane component Atu4681 PF00005 ABC transporter Atu4682 PF01266 FAD dependent oxidoreductase Atu4683 PF01989 Protein of unknown function DUF126 Atu4683 PF04412 Atu4683 Atu4684 PF05544 Proline racemase Atu4685 PF00356 Bacterial regulatory proteins, lacI family Atu4685 PF13377 Periplasmic binding protein-like domain Atu4687 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu4688 PF00528 Binding-protein-dependent transport system inner membrane component Atu4689 PF00528 Binding-protein-dependent transport system inner membrane component Atu4690 PF00005 ABC transporter Atu4691 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atu4691 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu4692 PF00563 EAL domain Atu4692 PF00990 GGDEF domain Atu4692 PF08448 PAS fold Atu4693 PF02530 Atu4693 Atu4694 PF01979 Amidohydrolase family Atu4695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu4696 PF00528 Binding-protein-dependent transport system inner membrane component Atu4697 PF00528 Binding-protein-dependent transport system inner membrane component Atu4697 PF12911 Atu4697 Atu4698 PF07969 Amidohydrolase family Atu4699 PF01979 Amidohydrolase family Atu4700 PF00005 ABC transporter Atu4700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu4701 PF00005 ABC transporter Atu4701 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu4702 PF00392 Bacterial regulatory proteins, gntR family Atu4702 PF07729 FCD domain Atu4703 PF01613 Flavin reductase like domain Atu4704 PF01177 Asp/Glu/Hydantoin racemase Atu4705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4705 PF03466 LysR substrate binding domain Atu4706 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Atu4707 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Atu4707 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Atu4708 PF00384 Molybdopterin oxidoreductase Atu4708 PF01568 Molydopterin dinucleotide binding domain Atu4708 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atu4708 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Atu4708 PF12838 4Fe-4S dicluster domain Atu4708 PF13510 2Fe-2S iron-sulfur cluster binding domain Atu4709 PF11390 Atu4709 Atu4710 PF07690 Major Facilitator Superfamily Atu4711 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu4712 PF00072 Response regulator receiver domain Atu4712 PF00486 Transcriptional regulatory protein, C terminal Atu4714 PF06186 Atu4714 Atu4716 PF00196 Bacterial regulatory proteins, luxR family Atu4716 PF13188 PAS domain Atu4716 PF13426 PAS domain Atu4718 PF00392 Bacterial regulatory proteins, gntR family Atu4718 PF07729 FCD domain Atu4719 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu4720 PF00528 Binding-protein-dependent transport system inner membrane component Atu4721 PF00528 Binding-protein-dependent transport system inner membrane component Atu4721 PF12911 Atu4721 Atu4722 PF01019 Gamma-glutamyltranspeptidase Atu4723 PF00005 ABC transporter Atu4723 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu4724 PF05532 CsbD-like Atu4726 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Atu4726 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Atu4727 PF03401 Tripartite tricarboxylate transporter family receptor Atu4728 PF00005 ABC transporter Atu4728 PF00664 ABC transporter transmembrane region Atu4729 PF00005 ABC transporter Atu4730 PF05229 Atu4730 Atu4731 PF00577 Outer membrane usher protein Atu4732 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Atu4733 PF05229 Atu4733 Atu4734 PF00330 Aconitase family (aconitate hydratase) Atu4734 PF06434 Aconitate hydratase 2 N-terminus Atu4734 PF11791 Aconitate B N-terminal domain Atu4736 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu4736 PF00672 HAMP domain Atu4738 PF00132 Bacterial transferase hexapeptide (six repeats) Atu4739 PF12680 SnoaL-like domain Atu4739 PF13738 Pyridine nucleotide-disulphide oxidoreductase Atu4740 PF00107 Zinc-binding dehydrogenase Atu4740 PF08240 Alcohol dehydrogenase GroES-like domain Atu4741 PF00158 Sigma-54 interaction domain Atu4741 PF01590 GAF domain Atu4741 PF02954 Bacterial regulatory protein, Fis family Atu4742 PF13432 Tetratricopeptide repeat Atu4743 PF00356 Bacterial regulatory proteins, lacI family Atu4743 PF13407 Periplasmic binding protein domain Atu4744 PF13407 Periplasmic binding protein domain Atu4745 PF00005 ABC transporter Atu4746 PF02653 Atu4746 Atu4747 PF02653 Atu4747 Atu4748 PF01261 Xylose isomerase-like TIM barrel Atu4749 PF00485 Phosphoribulokinase / Uridine kinase family Atu4750 PF01261 Xylose isomerase-like TIM barrel Atu4752 PF00005 ABC transporter Atu4753 PF00528 Binding-protein-dependent transport system inner membrane component Atu4754 PF00528 Binding-protein-dependent transport system inner membrane component Atu4755 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu4756 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Atu4757 PF00557 Metallopeptidase family M24 Atu4757 PF01321 Creatinase/Prolidase N-terminal domain Atu4758 PF02423 Ornithine cyclodeaminase/mu-crystallin family Atu4759 PF00291 Pyridoxal-phosphate dependent enzyme Atu4760 PF00155 Aminotransferase class I and II Atu4760 PF00392 Bacterial regulatory proteins, gntR family Atu4761 PF00202 Aminotransferase class-III Atu4762 PF00171 Aldehyde dehydrogenase family Atu4763 PF01037 AsnC family Atu4763 PF13412 Winged helix-turn-helix DNA-binding Atu4764 PF13302 Acetyltransferase (GNAT) domain Atu4765 PF04244 Deoxyribodipyrimidine photo-lyase-related protein Atu4768 PF07012 Atu4768 Atu4769 PF04199 Putative cyclase Atu4770 PF01494 FAD binding domain Atu4771 PF00190 Cupin Atu4773 PF00072 Response regulator receiver domain Atu4774 PF00072 Response regulator receiver domain Atu4774 PF00196 Bacterial regulatory proteins, luxR family Atu4775 PF00512 His Kinase A (phospho-acceptor) domain Atu4775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu4776 PF00384 Molybdopterin oxidoreductase Atu4776 PF01568 Molydopterin dinucleotide binding domain Atu4777 PF00210 Ferritin-like domain Atu4778 PF00561 alpha/beta hydrolase fold Atu4781 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu4782 PF00072 Response regulator receiver domain Atu4782 PF00486 Transcriptional regulatory protein, C terminal Atu4783 PF13343 Bacterial extracellular solute-binding protein Atu4784 PF13343 Bacterial extracellular solute-binding protein Atu4785 PF00528 Binding-protein-dependent transport system inner membrane component Atu4786 PF00005 ABC transporter Atu4786 PF08402 TOBE domain Atu4787 PF00459 Inositol monophosphatase family Atu4788 PF13649 Methyltransferase domain Atu4789 PF16363 Atu4789 Atu4790 PF01370 NAD dependent epimerase/dehydratase family Atu4793 PF02563 Polysaccharide biosynthesis/export protein Atu4793 PF10531 SLBB domain Atu4794 PF13614 AAA domain Atu4795 PF00196 Bacterial regulatory proteins, luxR family Atu4796 PF02585 GlcNAc-PI de-N-acetylase Atu4797 PF00483 Nucleotidyl transferase Atu4798 PF08421 Putative zinc binding domain Atu4798 PF08484 C-methyltransferase C-terminal domain Atu4798 PF13489 Methyltransferase domain Atu4799 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Atu4800 PF09940 Domain of unknown function (DUF2172) Atu4800 PF16221 Atu4800 Atu4800 PF16254 Atu4800 Atu4801 PF01370 NAD dependent epimerase/dehydratase family Atu4802 PF00202 Aminotransferase class-III Atu4803 PF00196 Bacterial regulatory proteins, luxR family Atu4805 PF00072 Response regulator receiver domain Atu4805 PF00196 Bacterial regulatory proteins, luxR family Atu4805 PF00512 His Kinase A (phospho-acceptor) domain Atu4805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu4805 PF13596 PAS domain Atu4806 PF00535 Glycosyl transferase family 2 Atu4807 PF13440 Atu4807 Atu4808 PF04230 Atu4808 Atu4809 PF13439 Glycosyltransferase Family 4 Atu4809 PF13692 Glycosyl transferases group 1 Atu4810 PF12904 Putative collagen-binding domain of a collagenase Atu4810 PF13204 Protein of unknown function (DUF4038) Atu4811 PF00953 Glycosyl transferase family 4 Atu4812 PF02698 DUF218 domain Atu4814 PF00132 Bacterial transferase hexapeptide (six repeats) Atu4815 PF00534 Glycosyl transferases group 1 Atu4815 PF13579 Glycosyl transferase 4-like domain Atu4816 PF13692 Glycosyl transferases group 1 Atu4817 PF13579 Glycosyl transferase 4-like domain Atu4817 PF13692 Glycosyl transferases group 1 Atu4818 PF01037 AsnC family Atu4818 PF13412 Winged helix-turn-helix DNA-binding Atu4819 PF03479 Domain of unknown function (DUF296) Atu4820 PF03479 Domain of unknown function (DUF296) Atu4821 PF13561 Enoyl-(Acyl carrier protein) reductase Atu4822 PF00501 AMP-binding enzyme Atu4822 PF13193 AMP-binding enzyme C-terminal domain Atu4823 PF00108 Thiolase, N-terminal domain Atu4823 PF02803 Thiolase, C-terminal domain Atu4824 PF01614 Bacterial transcriptional regulator Atu4824 PF09339 IclR helix-turn-helix domain Atu4825 PF13561 Enoyl-(Acyl carrier protein) reductase Atu4826 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu4827 PF04290 Atu4827 Atu4827 PF06808 Atu4827 Atu4830 PF08808 Atu4830 Atu4831 PF09722 Atu4831 Atu4833 PF00723 Glycosyl hydrolases family 15 Atu4833 PF09137 Glucodextranase, domain N Atu4834 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Atu4834 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atu4835 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Atu4835 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Atu4836 PF00480 ROK family Atu4838 PF08212 Lipocalin-like domain Atu4839 PF13561 Enoyl-(Acyl carrier protein) reductase Atu4841 PF00455 Atu4841 Atu4841 PF08220 DeoR-like helix-turn-helix domain Atu4842 PF13407 Periplasmic binding protein domain Atu4843 PF00005 ABC transporter Atu4844 PF02653 Atu4844 Atu4845 PF02653 Atu4845 Atu4846 PF14486 Domain of unknown function (DUF4432) Atu4847 PF00294 pfkB family carbohydrate kinase Atu4848 PF01791 DeoC/LacD family aldolase Atu4849 PF00171 Aldehyde dehydrogenase family Atu4851 PF00285 Citrate synthase Atu4855 PF01443 Viral (Superfamily 1) RNA helicase Atu4855 PF03389 MobA/MobL family Atu4855 PF13604 AAA domain Atu4856 PF01909 Nucleotidyltransferase domain Atu4856 PF05168 HEPN domain Atu4858 PF02534 Type IV secretory system Conjugative DNA transfer Atu4859 PF12281 Atu4859 Atu4860 PF01909 Nucleotidyltransferase domain Atu4860 PF05168 HEPN domain Atu4861 PF01695 IstB-like ATP binding protein Atu4862 PF00665 Integrase core domain Atu4864 PF01047 MarR family Atu4865 PF00106 short chain dehydrogenase Atu4866 PF11512 Agrobacterium tumefaciens protein Atu4866 Atu4867 PF12680 SnoaL-like domain Atu4868 PF00248 Aldo/keto reductase family Atu4869 PF06719 Atu4869 Atu4870 PF00107 Zinc-binding dehydrogenase Atu4870 PF08240 Alcohol dehydrogenase GroES-like domain Atu4872 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu4872 PF03466 LysR substrate binding domain Atu4873 PF00440 Bacterial regulatory proteins, tetR family Atu4875 PF12680 SnoaL-like domain Atu4876 PF00248 Aldo/keto reductase family Atu4877 PF13561 Enoyl-(Acyl carrier protein) reductase Atu4878 PF12680 SnoaL-like domain Atu4880 PF06719 Atu4880 Atu4880 PF12833 Helix-turn-helix domain Atu4882 PF11972 Atu4882 Atu4890 PF00665 Integrase core domain Atu4890 PF13276 Atu4890 Atu4891 PF01527 Transposase Atu4892 PF02384 N-6 DNA Methylase Atu4894 PF00665 Integrase core domain Atu4896 PF13302 Acetyltransferase (GNAT) domain Atu5000 PF13614 AAA domain Atu5001 PF02195 ParB-like nuclease domain Atu5001 PF07506 Atu5001 Atu5002 PF03428 Atu5002 Atu5002 PF11800 Atu5002 Atu5003 PF01266 FAD dependent oxidoreductase Atu5004 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu5005 PF00005 ABC transporter Atu5005 PF00528 Binding-protein-dependent transport system inner membrane component Atu5006 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu5007 PF00356 Bacterial regulatory proteins, lacI family Atu5007 PF13377 Periplasmic binding protein-like domain Atu5008 PF01904 Protein of unknown function DUF72 Atu5010 PF02525 Flavodoxin-like fold Atu5011 PF01323 DSBA-like thioredoxin domain Atu5013 PF07704 Atu5013 Atu5014 PF01850 PIN domain Atu5015 PF00589 Phage integrase family Atu5016 PF07756 Atu5016 Atu5016 PF11972 Atu5016 Atu5018 PF11185 Atu5018 Atu5019 PF01026 TatD related DNase Atu5022 PF07693 Atu5022 Atu5023 PF13175 AAA ATPase domain Atu5024 PF13245 Part of AAA domain Atu5025 PF13384 Homeodomain-like domain Atu5027 PF13276 Atu5027 Atu5028 PF01527 Transposase Atu5031 PF04471 Restriction endonuclease Atu5039 PF02661 Fic/DOC family Atu5039 PF13412 Winged helix-turn-helix DNA-binding Atu5039 PF13784 Fic/DOC family N-terminal Atu5040 PF02195 ParB-like nuclease domain Atu5040 PF07506 Atu5040 Atu5041 PF02195 ParB-like nuclease domain Atu5041 PF07506 Atu5041 Atu5042 PF00239 Resolvase, N terminal domain Atu5042 PF07508 Recombinase Atu5044 PF08843 Nucleotidyl transferase of unknown function (DUF1814) Atu5048 PF03372 Endonuclease/Exonuclease/phosphatase family Atu5049 PF02735 Ku70/Ku80 beta-barrel domain Atu5050 PF02735 Ku70/Ku80 beta-barrel domain Atu5051 PF01068 ATP dependent DNA ligase domain Atu5051 PF04679 ATP dependent DNA ligase C terminal region Atu5052 PF00011 Hsp20/alpha crystallin family Atu5053 PF06169 Protein of unknown function (DUF982) Atu5055 PF01068 ATP dependent DNA ligase domain Atu5055 PF04679 ATP dependent DNA ligase C terminal region Atu5055 PF13298 DNA polymerase Ligase (LigD) Atu5058 PF13416 Bacterial extracellular solute-binding protein Atu5059 PF00528 Binding-protein-dependent transport system inner membrane component Atu5060 PF00528 Binding-protein-dependent transport system inner membrane component Atu5061 PF03009 Glycerophosphoryl diester phosphodiesterase family Atu5062 PF00005 ABC transporter Atu5062 PF08402 TOBE domain Atu5063 PF01380 SIS domain Atu5063 PF01418 Helix-turn-helix domain, rpiR family Atu5064 PF01047 MarR family Atu5065 PF00561 alpha/beta hydrolase fold Atu5066 PF12697 Alpha/beta hydrolase family Atu5067 PF00701 Dihydrodipicolinate synthetase family Atu5068 PF00005 ABC transporter Atu5068 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu5069 PF00528 Binding-protein-dependent transport system inner membrane component Atu5070 PF00528 Binding-protein-dependent transport system inner membrane component Atu5071 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu5072 PF13088 BNR repeat-like domain Atu5073 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Atu5074 PF00465 Iron-containing alcohol dehydrogenase Atu5075 PF00392 Bacterial regulatory proteins, gntR family Atu5075 PF07729 FCD domain Atu5076 PF07005 Protein of unknown function, DUF1537 Atu5076 PF17042 Atu5076 Atu5078 PF00356 Bacterial regulatory proteins, lacI family Atu5078 PF13377 Periplasmic binding protein-like domain Atu5080 PF00528 Binding-protein-dependent transport system inner membrane component Atu5081 PF00528 Binding-protein-dependent transport system inner membrane component Atu5082 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) Atu5083 PF00005 ABC transporter Atu5083 PF08402 TOBE domain Atu5084 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5084 PF03466 LysR substrate binding domain Atu5085 PF00753 Metallo-beta-lactamase superfamily Atu5086 PF06745 KaiC Atu5087 PF07536 Atu5087 Atu5090 PF13641 Glycosyltransferase like family 2 Atu5091 PF13437 HlyD family secretion protein Atu5094 PF01610 Atu5094 Atu5094 PF14690 Atu5094 Atu5096 PF02586 Uncharacterised ACR, COG2135 Atu5097 PF01068 ATP dependent DNA ligase domain Atu5097 PF04679 ATP dependent DNA ligase C terminal region Atu5099 PF00817 impB/mucB/samB family Atu5100 PF02811 PHP domain Atu5100 PF07733 Bacterial DNA polymerase III alpha subunit Atu5100 PF14579 Helix-hairpin-helix motif Atu5101 PF07215 Atu5101 Atu5103 PF08401 Atu5103 Atu5104 PF05284 Atu5104 Atu5106 PF00216 Bacterial DNA-binding protein Atu5107 PF05406 WGR domain Atu5108 PF02534 Type IV secretory system Conjugative DNA transfer Atu5109 PF06412 Atu5109 Atu5110 PF07820 Atu5110 Atu5111 PF03389 MobA/MobL family Atu5111 PF13604 AAA domain Atu5112 PF07804 HipA-like C-terminal domain Atu5113 PF01381 Helix-turn-helix Atu5116 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) Atu5117 PF01909 Nucleotidyltransferase domain Atu5117 PF05168 HEPN domain Atu5118 PF00155 Aminotransferase class I and II Atu5119 PF00486 Transcriptional regulatory protein, C terminal Atu5121 PF00486 Transcriptional regulatory protein, C terminal Atu5122 PF13561 Enoyl-(Acyl carrier protein) reductase Atu5123 PF00205 Thiamine pyrophosphate enzyme, central domain Atu5123 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atu5123 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Atu5124 PF00202 Aminotransferase class-III Atu5125 PF00392 Bacterial regulatory proteins, gntR family Atu5125 PF07729 FCD domain Atu5126 PF00005 ABC transporter Atu5126 PF08402 TOBE domain Atu5127 PF00528 Binding-protein-dependent transport system inner membrane component Atu5128 PF00528 Binding-protein-dependent transport system inner membrane component Atu5129 PF13416 Bacterial extracellular solute-binding protein Atu5131 PF00005 ABC transporter Atu5132 PF02687 Atu5132 Atu5133 PF02687 Atu5133 Atu5133 PF12704 MacB-like periplasmic core domain Atu5134 PF07143 Hydroxyneurosporene synthase (CrtC) Atu5134 PF17186 Atu5134 Atu5136 PF01614 Bacterial transcriptional regulator Atu5136 PF09339 IclR helix-turn-helix domain Atu5137 PF00171 Aldehyde dehydrogenase family Atu5138 PF00465 Iron-containing alcohol dehydrogenase Atu5139 PF00753 Metallo-beta-lactamase superfamily Atu5140 PF08242 Methyltransferase domain Atu5141 PF12833 Helix-turn-helix domain Atu5141 PF12852 Cupin Atu5143 PF00132 Bacterial transferase hexapeptide (six repeats) Atu5144 PF00326 Prolyl oligopeptidase family Atu5145 PF13673 Acetyltransferase (GNAT) domain Atu5147 PF02308 Atu5147 Atu5148 PF02566 OsmC-like protein Atu5149 PF00583 Acetyltransferase (GNAT) family Atu5150 PF00043 Glutathione S-transferase, C-terminal domain Atu5150 PF02798 Glutathione S-transferase, N-terminal domain Atu5151 PF01638 HxlR-like helix-turn-helix Atu5155 PF01047 MarR family Atu5156 PF00106 short chain dehydrogenase Atu5159 PF10116 Atu5159 Atu5163 PF04956 Atu5163 Atu5164 PF05101 Atu5164 Atu5165 PF03135 Atu5165 Atu5166 PF07996 Type IV secretion system proteins Atu5167 PF04610 Atu5167 Atu5169 PF04335 VirB8 protein Atu5170 PF03524 Conjugal transfer protein Atu5171 PF03743 Bacterial conjugation TrbI-like protein Atu5172 PF00437 Type II/IV secretion system protein Atu5173 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atu5175 PF00072 Response regulator receiver domain Atu5175 PF00486 Transcriptional regulatory protein, C terminal Atu5176 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu5177 PF16576 Atu5177 Atu5178 PF00005 ABC transporter Atu5178 PF02687 Atu5178 Atu5178 PF12704 MacB-like periplasmic core domain Atu5181 PF13561 Enoyl-(Acyl carrier protein) reductase Atu5182 PF00107 Zinc-binding dehydrogenase Atu5182 PF08240 Alcohol dehydrogenase GroES-like domain Atu5183 PF03807 NADP oxidoreductase coenzyme F420-dependent Atu5184 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5184 PF03466 LysR substrate binding domain Atu5185 PF13561 Enoyl-(Acyl carrier protein) reductase Atu5187 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5187 PF03466 LysR substrate binding domain Atu5188 PF08240 Alcohol dehydrogenase GroES-like domain Atu5188 PF13602 Zinc-binding dehydrogenase Atu5189 PF03992 Antibiotic biosynthesis monooxygenase Atu5190 PF12697 Alpha/beta hydrolase family Atu5191 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu5193 PF00326 Prolyl oligopeptidase family Atu5194 PF00376 MerR family regulatory protein Atu5194 PF09278 MerR, DNA binding Atu5195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5195 PF03466 LysR substrate binding domain Atu5196 PF03734 L,D-transpeptidase catalytic domain Atu5197 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5197 PF03466 LysR substrate binding domain Atu5198 PF00248 Aldo/keto reductase family Atu5199 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu5200 PF07690 Major Facilitator Superfamily Atu5201 PF02678 Pirin Atu5201 PF05726 Pirin C-terminal cupin domain Atu5202 PF00107 Zinc-binding dehydrogenase Atu5202 PF08240 Alcohol dehydrogenase GroES-like domain Atu5203 PF00753 Metallo-beta-lactamase superfamily Atu5204 PF00171 Aldehyde dehydrogenase family Atu5206 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5206 PF03466 LysR substrate binding domain Atu5207 PF00881 Nitroreductase family Atu5208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5208 PF03466 LysR substrate binding domain Atu5209 PF12680 SnoaL-like domain Atu5210 PF13561 Enoyl-(Acyl carrier protein) reductase Atu5211 PF01047 MarR family Atu5212 PF12697 Alpha/beta hydrolase family Atu5213 PF00107 Zinc-binding dehydrogenase Atu5214 PF13561 Enoyl-(Acyl carrier protein) reductase Atu5215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5215 PF03466 LysR substrate binding domain Atu5218 PF00005 ABC transporter Atu5219 PF00528 Binding-protein-dependent transport system inner membrane component Atu5220 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu5222 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu5223 PF06684 Amino acid synthesis Atu5224 PF07978 NIPSNAP Atu5225 PF02627 Carboxymuconolactone decarboxylase family Atu5226 PF00561 alpha/beta hydrolase fold Atu5227 PF00296 Luciferase-like monooxygenase Atu5228 PF00171 Aldehyde dehydrogenase family Atu5229 PF01613 Flavin reductase like domain Atu5230 PF13185 GAF domain Atu5230 PF13556 PucR C-terminal helix-turn-helix domain Atu5231 PF13673 Acetyltransferase (GNAT) domain Atu5232 PF01042 Endoribonuclease L-PSP Atu5233 PF01168 Alanine racemase, N-terminal domain Atu5233 PF14031 Putative serine dehydratase domain Atu5234 PF00528 Binding-protein-dependent transport system inner membrane component Atu5235 PF00528 Binding-protein-dependent transport system inner membrane component Atu5236 PF00005 ABC transporter Atu5237 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu5238 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Atu5239 PF00356 Bacterial regulatory proteins, lacI family Atu5239 PF13377 Periplasmic binding protein-like domain Atu5240 PF00107 Zinc-binding dehydrogenase Atu5240 PF08240 Alcohol dehydrogenase GroES-like domain Atu5241 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5241 PF03466 LysR substrate binding domain Atu5242 PF03576 Peptidase family S58 Atu5243 PF00455 Atu5243 Atu5243 PF08220 DeoR-like helix-turn-helix domain Atu5245 PF00857 Isochorismatase family Atu5246 PF00528 Binding-protein-dependent transport system inner membrane component Atu5247 PF00528 Binding-protein-dependent transport system inner membrane component Atu5248 PF00005 ABC transporter Atu5248 PF08402 TOBE domain Atu5249 PF13416 Bacterial extracellular solute-binding protein Atu5250 PF13561 Enoyl-(Acyl carrier protein) reductase Atu5251 PF00202 Aminotransferase class-III Atu5252 PF01636 Phosphotransferase enzyme family Atu5253 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu5254 PF00528 Binding-protein-dependent transport system inner membrane component Atu5255 PF00528 Binding-protein-dependent transport system inner membrane component Atu5255 PF12911 Atu5255 Atu5256 PF00005 ABC transporter Atu5256 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu5257 PF00005 ABC transporter Atu5257 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu5258 PF00144 Beta-lactamase Atu5259 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5259 PF03466 LysR substrate binding domain Atu5260 PF00144 Beta-lactamase Atu5261 PF07519 Tannase and feruloyl esterase Atu5263 PF00528 Binding-protein-dependent transport system inner membrane component Atu5264 PF00528 Binding-protein-dependent transport system inner membrane component Atu5265 PF13416 Bacterial extracellular solute-binding protein Atu5266 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu5266 PF07730 Histidine kinase Atu5266 PF17200 Atu5266 Atu5267 PF00072 Response regulator receiver domain Atu5267 PF00196 Bacterial regulatory proteins, luxR family Atu5268 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu5269 PF06808 Atu5269 Atu5270 PF04290 Atu5270 Atu5271 PF08279 HTH domain Atu5271 PF13280 Atu5271 Atu5272 PF00043 Glutathione S-transferase, C-terminal domain Atu5272 PF13417 Glutathione S-transferase, N-terminal domain Atu5273 PF01047 MarR family Atu5274 PF12833 Helix-turn-helix domain Atu5274 PF12852 Cupin Atu5276 PF13561 Enoyl-(Acyl carrier protein) reductase Atu5277 PF04120 Atu5277 Atu5278 PF05974 Domain of unknown function (DUF892) Atu5280 PF00857 Isochorismatase family Atu5283 PF08281 Sigma-70, region 4 Atu5284 PF00128 Alpha amylase, catalytic domain Atu5284 PF11941 Domain of unknown function (DUF3459) Atu5285 PF00534 Glycosyl transferases group 1 Atu5285 PF08323 Starch synthase catalytic domain Atu5289 PF00440 Bacterial regulatory proteins, tetR family Atu5290 PF00106 short chain dehydrogenase Atu5291 PF00440 Bacterial regulatory proteins, tetR family Atu5292 PF12823 Atu5292 Atu5293 PF03653 Atu5293 Atu5296 PF12146 Putative lysophospholipase Atu5297 PF00561 alpha/beta hydrolase fold Atu5299 PF12281 Atu5299 Atu5300 PF13470 Atu5300 Atu5302 PF00202 Aminotransferase class-III Atu5303 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5303 PF03466 LysR substrate binding domain Atu5306 PF00285 Citrate synthase Atu5307 PF00285 Citrate synthase Atu5307 PF13411 MerR HTH family regulatory protein Atu5309 PF04542 Sigma-70 region 2 Atu5309 PF08281 Sigma-70, region 4 Atu5310 PF04773 FecR protein Atu5310 PF16220 Atu5310 Atu5310 PF16344 Atu5310 Atu5311 PF00593 TonB dependent receptor Atu5311 PF07660 Secretin and TonB N terminus short domain Atu5311 PF07715 TonB-dependent Receptor Plug Domain Atu5312 PF01497 Periplasmic binding protein Atu5313 PF04954 Siderophore-interacting protein Atu5313 PF08021 Siderophore-interacting FAD-binding domain Atu5314 PF01032 FecCD transport family Atu5315 PF01032 FecCD transport family Atu5316 PF00005 ABC transporter Atu5320 PF13419 Haloacid dehalogenase-like hydrolase Atu5321 PF12840 Helix-turn-helix domain Atu5322 PF03358 NADPH-dependent FMN reductase Atu5323 PF07690 Major Facilitator Superfamily Atu5324 PF08240 Alcohol dehydrogenase GroES-like domain Atu5324 PF13602 Zinc-binding dehydrogenase Atu5325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5325 PF03466 LysR substrate binding domain Atu5327 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5327 PF03466 LysR substrate binding domain Atu5328 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atu5328 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu5329 PF03737 Demethylmenaquinone methyltransferase Atu5330 PF03401 Tripartite tricarboxylate transporter family receptor Atu5331 PF07331 Atu5331 Atu5332 PF01970 Atu5332 Atu5333 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atu5333 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu5334 PF05161 MOFRL family Atu5334 PF13660 Domain of unknown function (DUF4147) Atu5335 PF01070 FMN-dependent dehydrogenase Atu5336 PF06249 Ethanolamine utilisation protein EutQ Atu5338 PF12833 Helix-turn-helix domain Atu5339 PF00892 EamA-like transporter family Atu5341 PF01965 DJ-1/PfpI family Atu5341 PF12833 Helix-turn-helix domain Atu5342 PF05853 Prokaryotic protein of unknown function (DUF849) Atu5343 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu5344 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Atu5344 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Atu5344 PF13279 Thioesterase-like superfamily Atu5345 PF00528 Binding-protein-dependent transport system inner membrane component Atu5346 PF00528 Binding-protein-dependent transport system inner membrane component Atu5346 PF12911 Atu5346 Atu5347 PF00005 ABC transporter Atu5347 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu5348 PF07859 alpha/beta hydrolase fold Atu5349 PF08447 PAS fold Atu5350 PF02661 Fic/DOC family Atu5350 PF13776 Atu5350 Atu5352 PF01526 Atu5352 Atu5353 PF00665 Integrase core domain Atu5353 PF01527 Transposase Atu5353 PF13276 Atu5353 Atu5354 PF03797 Autotransporter beta-domain Atu5358 PF01810 Atu5358 Atu5359 PF07411 Domain of unknown function (DUF1508) Atu5361 PF00230 Major intrinsic protein Atu5362 PF11064 Atu5362 Atu5364 PF03797 Autotransporter beta-domain Atu5365 PF00563 EAL domain Atu5366 PF01527 Transposase Atu5367 PF05717 Atu5367 Atu5370 PF00665 Integrase core domain Atu5370 PF13276 Atu5370 Atu5371 PF01527 Transposase Atu5372 PF00990 GGDEF domain Atu5375 PF00989 PAS fold Atu5375 PF07536 Atu5375 Atu5377 PF07568 Atu5377 Atu5377 PF13426 PAS domain Atu5377 PF13581 Histidine kinase-like ATPase domain Atu5378 PF00072 Response regulator receiver domain Atu5380 PF13302 Acetyltransferase (GNAT) domain Atu5381 PF00873 AcrB/AcrD/AcrF family Atu5382 PF16576 Atu5382 Atu5383 PF00440 Bacterial regulatory proteins, tetR family Atu5385 PF02661 Fic/DOC family Atu5385 PF13412 Winged helix-turn-helix DNA-binding Atu5385 PF13784 Fic/DOC family N-terminal Atu5386 PF00440 Bacterial regulatory proteins, tetR family Atu5387 PF07080 Protein of unknown function (DUF1348) Atu5389 PF00561 alpha/beta hydrolase fold Atu5390 PF01965 DJ-1/PfpI family Atu5390 PF12833 Helix-turn-helix domain Atu5391 PF13561 Enoyl-(Acyl carrier protein) reductase Atu5392 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5392 PF03466 LysR substrate binding domain Atu5393 PF00356 Bacterial regulatory proteins, lacI family Atu5393 PF13377 Periplasmic binding protein-like domain Atu5394 PF00701 Dihydrodipicolinate synthetase family Atu5395 PF00083 Sugar (and other) transporter Atu5398 PF00701 Dihydrodipicolinate synthetase family Atu5399 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atu5399 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu5400 PF00005 ABC transporter Atu5400 PF08402 TOBE domain Atu5401 PF00528 Binding-protein-dependent transport system inner membrane component Atu5402 PF00528 Binding-protein-dependent transport system inner membrane component Atu5403 PF13416 Bacterial extracellular solute-binding protein Atu5404 PF00392 Bacterial regulatory proteins, gntR family Atu5404 PF07729 FCD domain Atu5406 PF00392 Bacterial regulatory proteins, gntR family Atu5406 PF07729 FCD domain Atu5407 PF01261 Xylose isomerase-like TIM barrel Atu5408 PF00528 Binding-protein-dependent transport system inner membrane component Atu5409 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu5410 PF00005 ABC transporter Atu5411 PF13416 Bacterial extracellular solute-binding protein Atu5412 PF00528 Binding-protein-dependent transport system inner membrane component Atu5413 PF00528 Binding-protein-dependent transport system inner membrane component Atu5414 PF00557 Metallopeptidase family M24 Atu5415 PF01613 Flavin reductase like domain Atu5418 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Atu5418 PF02558 Ketopantoate reductase PanE/ApbA Atu5419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5419 PF03466 LysR substrate binding domain Atu5420 PF13416 Bacterial extracellular solute-binding protein Atu5421 PF00528 Binding-protein-dependent transport system inner membrane component Atu5422 PF00528 Binding-protein-dependent transport system inner membrane component Atu5423 PF00005 ABC transporter Atu5423 PF08402 TOBE domain Atu5424 PF13738 Pyridine nucleotide-disulphide oxidoreductase Atu5425 PF01323 DSBA-like thioredoxin domain Atu5427 PF02627 Carboxymuconolactone decarboxylase family Atu5428 PF01554 MatE Atu5429 PF03466 LysR substrate binding domain Atu5433 PF00356 Bacterial regulatory proteins, lacI family Atu5433 PF13407 Periplasmic binding protein domain Atu5434 PF01261 Xylose isomerase-like TIM barrel Atu5435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu5435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu5436 PF01261 Xylose isomerase-like TIM barrel Atu5437 PF01638 HxlR-like helix-turn-helix Atu5438 PF13561 Enoyl-(Acyl carrier protein) reductase Atu5439 PF06475 Putative glycolipid-binding Atu5440 PF14384 Atu5440 Atu5441 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu5442 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu5442 PF00672 HAMP domain Atu5443 PF00440 Bacterial regulatory proteins, tetR family Atu5444 PF00106 short chain dehydrogenase Atu5445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Atu5446 PF12146 Putative lysophospholipase Atu5447 PF08240 Alcohol dehydrogenase GroES-like domain Atu5447 PF13602 Zinc-binding dehydrogenase Atu5448 PF05406 WGR domain Atu5449 PF00011 Hsp20/alpha crystallin family Atu5450 PF06169 Protein of unknown function (DUF982) Atu5452 PF00005 ABC transporter Atu5453 PF02687 Atu5453 Atu5453 PF12704 MacB-like periplasmic core domain Atu5454 PF07143 Hydroxyneurosporene synthase (CrtC) Atu5454 PF17186 Atu5454 Atu5455 PF13472 GDSL-like Lipase/Acylhydrolase family Atu5456 PF05035 2-keto-3-deoxy-galactonokinase Atu5457 PF00701 Dihydrodipicolinate synthetase family Atu5458 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu5458 PF13378 Enolase C-terminal domain-like Atu5459 PF13416 Bacterial extracellular solute-binding protein Atu5460 PF00528 Binding-protein-dependent transport system inner membrane component Atu5461 PF00528 Binding-protein-dependent transport system inner membrane component Atu5462 PF00005 ABC transporter Atu5463 PF01370 NAD dependent epimerase/dehydratase family Atu5464 PF01614 Bacterial transcriptional regulator Atu5464 PF08450 SMP-30/Gluconolaconase/LRE-like region Atu5464 PF09339 IclR helix-turn-helix domain Atu5465 PF13561 Enoyl-(Acyl carrier protein) reductase Atu5466 PF02705 Atu5466 Atu5469 PF00817 impB/mucB/samB family Atu5469 PF11799 impB/mucB/samB family C-terminal domain Atu5473 PF01063 Aminotransferase class IV Atu5474 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu5475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu5476 PF00117 Glutamine amidotransferase class-I Atu5477 PF00557 Metallopeptidase family M24 Atu5477 PF01321 Creatinase/Prolidase N-terminal domain Atu5478 PF13378 Enolase C-terminal domain-like Atu5479 PF01546 Peptidase family M20/M25/M40 Atu5479 PF07687 Peptidase dimerisation domain Atu5480 PF00005 ABC transporter Atu5481 PF00528 Binding-protein-dependent transport system inner membrane component Atu5482 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu5483 PF00392 Bacterial regulatory proteins, gntR family Atu5483 PF07729 FCD domain Atu5484 PF13545 Crp-like helix-turn-helix domain Atu5488 PF00027 Cyclic nucleotide-binding domain Atu5488 PF13545 Crp-like helix-turn-helix domain Atu5490 PF04542 Sigma-70 region 2 Atu5490 PF08281 Sigma-70, region 4 Atu5491 PF00199 Catalase Atu5491 PF06628 Catalase-related immune-responsive Atu5494 PF05974 Domain of unknown function (DUF892) Atu5495 PF00561 alpha/beta hydrolase fold Atu5496 PF00440 Bacterial regulatory proteins, tetR family Atu5497 PF02625 XdhC and CoxI family Atu5497 PF13478 XdhC Rossmann domain Atu5498 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu5498 PF01799 [2Fe-2S] binding domain Atu5499 PF00941 FAD binding domain in molybdopterin dehydrogenase Atu5499 PF03450 CO dehydrogenase flavoprotein C-terminal domain Atu5500 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Atu5500 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Atu5501 PF12804 MobA-like NTP transferase domain Atu5502 PF09825 Atu5502 Atu5505 PF00072 Response regulator receiver domain Atu5505 PF00486 Transcriptional regulatory protein, C terminal Atu5506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu5507 PF01019 Gamma-glutamyltranspeptidase Atu5509 PF00072 Response regulator receiver domain Atu5509 PF00512 His Kinase A (phospho-acceptor) domain Atu5509 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu5509 PF08447 PAS fold Atu5510 PF06745 KaiC Atu5513 PF00313 'Cold-shock' DNA-binding domain Atu5514 PF00226 DnaJ domain Atu5518 PF13454 FAD-NAD(P)-binding Atu5520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu5520 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Atu5521 PF00005 ABC transporter Atu5522 PF13458 Periplasmic binding protein Atu5523 PF02653 Atu5523 Atu5524 PF02653 Atu5524 Atu5525 PF00005 ABC transporter Atu5525 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu5526 PF00296 Luciferase-like monooxygenase Atu5527 PF03358 NADPH-dependent FMN reductase Atu5528 PF00989 PAS fold Atu5528 PF07536 Atu5528 Atu5528 PF08448 PAS fold Atu5528 PF13426 PAS domain Atu5529 PF13433 Periplasmic binding protein domain Atu5530 PF03861 ANTAR domain Atu5531 PF10518 TAT (twin-arginine translocation) pathway signal sequence Atu5531 PF13433 Periplasmic binding protein domain Atu5532 PF02653 Atu5532 Atu5533 PF02653 Atu5533 Atu5534 PF00005 ABC transporter Atu5534 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu5535 PF00005 ABC transporter Atu5536 PF00795 Carbon-nitrogen hydrolase Atu5537 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu5537 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu5538 PF13548 Atu5538 Atu5539 PF16576 Atu5539 Atu5540 PF07869 Atu5540 Atu5541 PF04632 Atu5541 Atu5543 PF12833 Helix-turn-helix domain Atu5544 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu5546 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu5546 PF03466 LysR substrate binding domain Atu5547 PF00753 Metallo-beta-lactamase superfamily Atu5548 PF01243 Pyridoxamine 5'-phosphate oxidase Atu6001 PF02027 RolB/RolC glucosidase family Atu6003 PF02027 RolB/RolC glucosidase family Atu6004 PF02027 RolB/RolC glucosidase family Atu6005 PF02027 RolB/RolC glucosidase family Atu6007 PF00106 short chain dehydrogenase Atu6007 PF00300 Histidine phosphatase superfamily (branch 1) Atu6008 PF03009 Glycerophosphoryl diester phosphodiesterase family Atu6009 PF02027 RolB/RolC glucosidase family Atu6010 PF01425 Amidase Atu6011 PF01593 Flavin containing amine oxidoreductase Atu6011 PF02027 RolB/RolC glucosidase family Atu6012 PF01745 Isopentenyl transferase Atu6013 PF02027 RolB/RolC glucosidase family Atu6014 PF02027 RolB/RolC glucosidase family Atu6015 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Atu6015 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Atu6016 PF02423 Ornithine cyclodeaminase/mu-crystallin family Atu6017 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Atu6017 PF02558 Ketopantoate reductase PanE/ApbA Atu6018 PF00491 Arginase family Atu6019 PF04324 BFD-like [2Fe-2S] binding domain Atu6019 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu6020 PF13510 2Fe-2S iron-sulfur cluster binding domain Atu6021 PF01266 FAD dependent oxidoreductase Atu6022 PF01968 Hydantoinase/oxoprolinase Atu6022 PF05378 Atu6022 Atu6023 PF02538 Atu6023 Atu6024 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu6024 PF03466 LysR substrate binding domain Atu6025 PF00528 Binding-protein-dependent transport system inner membrane component Atu6026 PF00528 Binding-protein-dependent transport system inner membrane component Atu6027 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu6028 PF00005 ABC transporter Atu6029 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu6029 PF03466 LysR substrate binding domain Atu6031 PF03743 Bacterial conjugation TrbI-like protein Atu6033 PF03524 Conjugal transfer protein Atu6034 PF04335 VirB8 protein Atu6035 PF04610 Atu6035 Atu6036 PF10907 Atu6036 Atu6037 PF10907 Atu6037 Atu6038 PF03135 Atu6038 Atu6039 PF05101 Atu6039 Atu6040 PF04956 Atu6040 Atu6041 PF00437 Type II/IV secretion system protein Atu6042 PF00765 Autoinducer synthetase Atu6043 PF13614 AAA domain Atu6044 PF02195 ParB-like nuclease domain Atu6044 PF07506 Atu6044 Atu6045 PF03428 Atu6045 Atu6045 PF11800 Atu6045 Atu6046 PF00239 Resolvase, N terminal domain Atu6047 PF07756 Atu6047 Atu6047 PF11972 Atu6047 Atu6048 PF00270 DEAD/DEAH box helicase Atu6051 PF08808 Atu6051 Atu6055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu6055 PF03466 LysR substrate binding domain Atu6056 PF02567 Phenazine biosynthesis-like protein Atu6057 PF00528 Binding-protein-dependent transport system inner membrane component Atu6058 PF00005 ABC transporter Atu6059 PF09084 NMT1/THI5 like Atu6060 PF00296 Luciferase-like monooxygenase Atu6061 PF00296 Luciferase-like monooxygenase Atu6062 PF13561 Enoyl-(Acyl carrier protein) reductase Atu6063 PF00732 GMC oxidoreductase Atu6063 PF05199 GMC oxidoreductase Atu6064 PF00561 alpha/beta hydrolase fold Atu6065 PF02627 Carboxymuconolactone decarboxylase family Atu6066 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Atu6067 PF02627 Carboxymuconolactone decarboxylase family Atu6068 PF02653 Atu6068 Atu6069 PF00005 ABC transporter Atu6070 PF13407 Periplasmic binding protein domain Atu6071 PF00753 Metallo-beta-lactamase superfamily Atu6072 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu6072 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Atu6073 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu6074 PF00005 ABC transporter Atu6074 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu6075 PF00528 Binding-protein-dependent transport system inner membrane component Atu6075 PF12911 Atu6075 Atu6076 PF00528 Binding-protein-dependent transport system inner membrane component Atu6077 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Atu6078 PF00296 Luciferase-like monooxygenase Atu6079 PF00296 Luciferase-like monooxygenase Atu6080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu6080 PF03466 LysR substrate binding domain Atu6082 PF00004 ATPase family associated with various cellular activities (AAA) Atu6083 PF00082 Subtilase family Atu6084 PF00296 Luciferase-like monooxygenase Atu6085 PF13379 NMT1-like family Atu6086 PF00528 Binding-protein-dependent transport system inner membrane component Atu6087 PF00005 ABC transporter Atu6088 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu6088 PF03466 LysR substrate binding domain Atu6089 PF00581 Rhodanese-like domain Atu6090 PF01068 ATP dependent DNA ligase domain Atu6090 PF04679 ATP dependent DNA ligase C terminal region Atu6092 PF00817 impB/mucB/samB family Atu6093 PF02811 PHP domain Atu6093 PF07733 Bacterial DNA polymerase III alpha subunit Atu6093 PF14579 Helix-hairpin-helix motif Atu6096 PF13154 Atu6096 Atu6096 PF13155 Toprim-like Atu6097 PF02661 Fic/DOC family Atu6098 PF01381 Helix-turn-helix Atu6099 PF07215 Atu6099 Atu6100 PF11284 Atu6100 Atu6103 PF02195 ParB-like nuclease domain Atu6108 PF03831 PhnA protein Atu6110 PF08401 Atu6110 Atu6112 PF05284 Atu6112 Atu6113 PF06414 Zeta toxin Atu6117 PF00293 NUDIX domain Atu6119 PF05284 Atu6119 Atu6120 PF00216 Bacterial DNA-binding protein Atu6121 PF05406 WGR domain Atu6122 PF00565 Staphylococcal nuclease homologue Atu6124 PF02534 Type IV secretory system Conjugative DNA transfer Atu6125 PF06412 Atu6125 Atu6126 PF07820 Atu6126 Atu6127 PF03389 MobA/MobL family Atu6127 PF13538 UvrD-like helicase C-terminal domain Atu6127 PF13604 AAA domain Atu6128 PF10502 Signal peptidase, peptidase S26 Atu6129 PF00795 Carbon-nitrogen hydrolase Atu6130 PF06871 Atu6130 Atu6131 PF09228 Prokaryotic Transcriptional repressor TraM Atu6132 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu6132 PF08447 PAS fold Atu6134 PF00196 Bacterial regulatory proteins, luxR family Atu6134 PF03472 Autoinducer binding domain Atu6135 PF00128 Alpha amylase, catalytic domain Atu6136 PF01895 PhoU domain Atu6136 PF02690 Atu6136 Atu6138 PF00455 Atu6138 Atu6138 PF08220 DeoR-like helix-turn-helix domain Atu6139 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu6140 PF00005 ABC transporter Atu6140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu6141 PF00005 ABC transporter Atu6141 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu6142 PF00528 Binding-protein-dependent transport system inner membrane component Atu6143 PF00528 Binding-protein-dependent transport system inner membrane component Atu6144 PF03009 Glycerophosphoryl diester phosphodiesterase family Atu6145 PF00459 Inositol monophosphatase family Atu6146 PF00293 NUDIX domain Atu6147 PF14486 Domain of unknown function (DUF4432) Atu6150 PF00067 Cytochrome P450 Atu6151 PF00067 Cytochrome P450 Atu6152 PF01548 Atu6152 Atu6152 PF02371 Atu6152 Atu6156 PF06903 Atu6156 Atu6158 PF07804 HipA-like C-terminal domain Atu6160 PF01527 Transposase Atu6164 PF01745 Isopentenyl transferase Atu6166 PF00512 His Kinase A (phospho-acceptor) domain Atu6166 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu6167 PF01464 Transglycosylase SLT domain Atu6168 PF04956 Atu6168 Atu6169 PF05101 Atu6169 Atu6170 PF03135 Atu6170 Atu6172 PF04610 Atu6172 Atu6173 PF17413 Atu6173 Atu6174 PF04335 VirB8 protein Atu6175 PF03524 Conjugal transfer protein Atu6176 PF03743 Bacterial conjugation TrbI-like protein Atu6177 PF00437 Type II/IV secretion system protein Atu6178 PF00072 Response regulator receiver domain Atu6178 PF00486 Transcriptional regulatory protein, C terminal Atu6179 PF07181 VirC2 protein Atu6180 PF07015 VirC1 protein Atu6181 PF07328 Atu6181 Atu6182 PF03432 Atu6182 Atu6184 PF02534 Type IV secretory system Conjugative DNA transfer Atu6185 PF04730 Atu6185 Atu6186 PF06661 Atu6186 Atu6189 PF12189 Single-strand DNA-binding protein Atu6190 PF07229 VirE2 Atu6191 PF06661 Atu6191 Atu6193 PF01261 Xylose isomerase-like TIM barrel Atu6194 PF00293 NUDIX domain Atu6196 PF00459 Inositol monophosphatase family Atu8019 PF08085 Atu8019 Atu8036 PF08173 Atu8036 Atu8037 PF09538 Atu8037 Atu8039 PF03992 Antibiotic biosynthesis monooxygenase Atu8052 PF05974 Domain of unknown function (DUF892) Atu8065 PF00327 Ribosomal protein L30p/L7e Atu8066 PF00468 Ribosomal protein L34 Atu8067 PF00444 Ribosomal protein L36 Atu8086 PF13773 Domain of unknown function (DUF4170) Atu8087 PF01471 Putative peptidoglycan binding domain Atu8091 PF08002 Protein of unknown function (DUF1697) Atu8092 PF10755 Atu8092 Atu8093 PF13472 GDSL-like Lipase/Acylhydrolase family Atu8094 PF07835 Bacterial aa3 type cytochrome c oxidase subunit IV Atu8095 PF09898 Atu8095 Atu8096 PF05532 CsbD-like Atu8097 PF12708 Pectate lyase superfamily protein Atu8115 PF10947 Atu8115 Atu8117 PF12680 SnoaL-like domain Atu8118 PF00582 Universal stress protein family Atu8119 PF05239 PRC-barrel domain Atu8120 PF06169 Protein of unknown function (DUF982) Atu8122 PF10065 Atu8122 Atu8124 PF05099 Tellurite resistance protein TerB Atu8126 PF09684 Atu8126 Atu8128 PF06995 Atu8128 Atu8129 PF00188 Cysteine-rich secretory protein family Atu8130 PF09608 Atu8130 Atu8131 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu8131 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atu8131 PF04039 Atu8131 Atu8131 PF13244 Atu8131 Atu8134 PF01124 MAPEG family Atu8135 PF06568 Atu8135 Atu8137 PF05258 Atu8137 Atu8139 PF12570 Atu8139 Atu8143 PF06629 Atu8143 Atu8147 PF01476 LysM domain Atu8148 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Atu8148 PF01872 RibD C-terminal domain Atu8149 PF07238 PilZ domain Atu8150 PF13350 Tyrosine phosphatase family Atu8152 PF12096 Atu8152 Atu8154 PF05016 Plasmid stabilisation system protein Atu8156 PF03591 Atu8156 Atu8160 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) Atu8161 PF06568 Atu8161 Atu8163 PF07238 PilZ domain Atu8165 PF08755 Hemimethylated DNA-binding protein YccV like Atu8166 PF06169 Protein of unknown function (DUF982) Atu8167 PF13116 Atu8167 Atu8168 PF12893 Putative lumazine-binding Atu8169 PF08327 Activator of Hsp90 ATPase homolog 1-like protein Atu8170 PF11015 Protein of unknown function (DUF2853) Atu8171 PF04386 Stringent starvation protein B Atu8172 PF10722 Putative bacterial sensory transduction regulator Atu8173 PF04380 Atu8173 Atu8174 PF01569 PAP2 superfamily Atu8175 PF07584 Atu8175 Atu8175 PF13709 Domain of unknown function (DUF4159) Atu8178 PF10983 Atu8178 Atu8180 PF12692 S-adenosyl-L-methionine methyltransferase Atu8183 PF13801 Heavy-metal resistance Atu8184 PF06993 Atu8184 Atu8187 PF17038 Atu8187 Atu8188 PF13480 Acetyltransferase (GNAT) domain Atu8190 PF04588 Hypoxia induced protein conserved region Atu8191 PF05164 Cell division protein ZapA Atu8192 PF13747 Atu8192 Atu8193 PF07235 Atu8193 Atu8194 PF07681 Atu8194 Atu8199 PF04972 BON domain Atu8201 PF09926 Atu8201 Atu8203 PF13441 Atu8203 Atu8205 PF08239 Bacterial SH3 domain